RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TENT4A (Homo sapiens)

Ensembl gene IDs: ENSG00000112941

Ensembl transcript IDs: ENST00000230859.8, ENST00000505457.1, ENST00000511764.5, ENST00000514410.1, ENST00000514697.1, ENST00000515721.1, ENST00000631941.2

Found 273 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGAAACATGCAGAGTGATCAGCGGCGGGCGTGCCGCGAGCCCGGCTaGCGTGCGGGGTGCTGGTCTCGGTTCCCCTGCCGGTGGCCGAGG +
Preference number: 1 (lower is better)
Translates to: RNMQSDQRRACREPG*RAGCWSRFPCRWPR
Trigger: CCTCGGCCACCGGCAGGGGAACCGAGACCAGCACCCCGCACGTCAGCCGGGCTCGCGGCACGCCCGCCGCTGATCACTCTGCATGTTTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR CCA 90 bp CCTGGGGCCCGACAGCAGGGCCACGGGCAGTCTGCCAGGTGGCTCTaGAGCCAAGCCCTTTGGAAAACCTTCAGGGCGACCTGGCTCCTT +
Preference number: 1 (lower is better)
Translates to: PGARQQGHGQSARWL*SQALWKTFRATWLL
Trigger: AAGGAGCCAGGTCGCCCTGAAGGTTTTCCAAAGGGCTTGGCTCCAGAGCCACCTGGCAGACTGCCCGTGGCCCTGCTGTCGGGCCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR TCA 90 bp GTTCTTGAAGATGGACGCGACCACCACACGAAGAAACATGCAGAGTaGTCAGCGGCGGGCGTGCCGCGAGCCCGGCTGACGTGCGGGGTG +
Preference number: 1 (lower is better)
Translates to: VLEDGRDHHTKKHAE*SAAGVPRARLTCGV
Trigger: CACCCCGCACGTCAGCCGGGCTCGCGGCACGCCCGCCGCTGATCACTCTGCATGTTTCTTCGTGTGGTGGTCGCGTCCATCTTCAAGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR CCA 90 bp CAGGGCCACGGGCAGTCTGCCAGGTGGCTCTGGAGCCAAGCCCTTTaGAAAACCTTCAGGGCGACCTGGCTCCTTCACTCACTTCCGACC +
Preference number: 1 (lower is better)
Translates to: QGHGQSARWLWSQAL*KTFRATWLLHSLPT
Trigger: GGTCGGAAGTGAGTGAAGGAGCCAGGTCGCCCTGAAGGTTTTCCAAAGGGCTTGGCTCCAGAGCCACCTGGCAGACTGCCCGTGGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR TCA 90 bp CGGCTACCTCAAACCGCAAGCGCATGTTCACGTCCCTGCAGTTCCTaGGCCCGACCTGCCTCAGCACTGAAGGAAGAATCCTGGGAAGGC +
Preference number: 1 (lower is better)
Translates to: RLPQTASACSRPCSS*ARPASALKEESWEG
Trigger: GCCTTCCCAGGATTCTTCCTTCAGTGCTGAGGCAGGTCGGGCTCAGGAACTGCAGGGACGTGAACATGCGCTTGCGGTTTGAGGTAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR GCA 90 bp GACAGTGGTTGTTGTGGCAGAATACACTTGCATAGTATACCTGTATaGTTCCGACGTCGGGCGCCAGCGGTCCCGGCCCCAACGCTGGGC +
Preference number: 1 (lower is better)
Translates to: DSGCCGRIHLHSIPV*FRRRAPAVPAPTLG
Trigger: GCCCAGCGTTGGGGCCGGGACCGCTGGCGCCCGACGTCGGAAGCATACAGGTATACTATGCAAGTGTATTCTGCCACAACAACCACTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR TCA 90 bp GGAATGCCTCCTAGAGAACCTGCAGTCGCAGCTGACAGCTCCCAATaGCAGAGTGAGCCAGTCCTGCTTCAAAAGGGCAGACCGCAGACA +
Preference number: 1 (lower is better)
Translates to: GMPPREPAVAADSSQ*QSEPVLLQKGRPQT
Trigger: TGTCTGCGGTCTGCCCTTTTGAAGCAGGACTGGCTCACTCTGTCATTGGGAGCTGTCAGCTGCGACTGCAGGTTCTCTAGGAGGCATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR GCA 90 bp AACCGCAAGCGCATGTTCACGTCCCTGCAGTTCCTGAGCCCGACCTaGCTCAGCACTGAAGGAAGAATCCTGGGAAGGCAGAAAACAACG +
Preference number: 1 (lower is better)
Translates to: NRKRMFTSLQFLSPT*LSTEGRILGRQKTT
Trigger: CGTTGTTTTCTGCCTTCCCAGGATTCTTCCTTCAGTGCTGAGGCAGGTCGGGCTCAGGAACTGCAGGGACGTGAACATGCGCTTGCGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR GCA 90 bp CTGCAGTCGCAGCTGACAGCTCCCAATGACAGAGTGAGCCAGTCCTaGTTCAAAAGGGCAGACCGCAGACATTTTAAAGCTTGTCCTTGC +
Preference number: 1 (lower is better)
Translates to: LQSQLTAPNDRVSQS*FKRADRRHFKACPC
Trigger: GCAAGGACAAGCTTTAAAATGTCTGCGGTCTGCCCTTTTGAAGCAGGACTGGCTCACTCTGTCATTGGGAGCTGTCAGCTGCGACTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR GCA 90 bp CGGTCATCGAGAACTGCAGACACAGTGTGCTACTCTATTCTGGAATaGCTCCTAGAGAACCTGCAGTCGCAGCTGACAGCTCCCAATGAC +
Preference number: 1 (lower is better)
Translates to: RSSRTADTVCYSILE*LLENLQSQLTAPND
Trigger: GTCATTGGGAGCTGTCAGCTGCGACTGCAGGTTCTCTAGGAGGCATTCCAGAATAGAGTAGCACACTGTGTCTGCAGTTCTCGATGACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR CCA 90 bp TGCTCTCCTGCGACACGATCCGTTAAAACACTCCCCACGGCGCACTaGGCAGCTGAAGCACTTCTCCTAGATTTGCTCTTAACAGAACGA +
Preference number: 1 (lower is better)
Translates to: CSPATRSVKTLPTAH*AAEALLLDLLLTER
Trigger: TCGTTCTGTTAAGAGCAAATCTAGGAGAAGTGCTTCAGCTGCCCAGTGCGCCGTGGGGAGTGTTTTAACGGATCGTGTCGCAGGAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR TCA 90 bp TGGGAAGGCAGAAAACAACGTCCACGTTTAATAAGGCTTCACAGATaGGCACAACGAGCTGTTCTTGAAGATGGACGCGACCACCACACG +
Preference number: 1 (lower is better)
Translates to: WEGRKQRPRLIRLHR*AQRAVLEDGRDHHT
Trigger: CGTGTGGTGGTCGCGTCCATCTTCAAGAACAGCTCGTTGTGCTCATCTGTGAAGCCTTATTAAACGTGGACGTTGTTTTCTGCCTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR GCA 90 bp GCTTATCCGTGGAGGAAAGACACACGAACGGGGTTTGATCTCCTCTaGTGCTTTGACGAACAGGAAATGAAAATAGCAAACCGCGAAGGA +
Preference number: 1 (lower is better)
Translates to: AYPWRKDTRTGFDLL*CFDEQEMKIANREG
Trigger: TCCTTCGCGGTTTGCTATTTTCATTTCCTGTTCGTCAAAGCAGCAGAGGAGATCAAACCCCGTTCGTGTGTCTTTCCTCCACGGATAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR TCA 90 bp TCCACGTTTAATAAGGCTTCACAGATGAGCACAACGAGCTGTTCTTaGAGATGGACGCGACCACCACACGAAGAAACATGCAGAGTGATC +
Preference number: 1 (lower is better)
Translates to: STFNKASQMSTTSCS*RWTRPPHEETCRVI
Trigger: GATCACTCTGCATGTTTCTTCGTGTGGTGGTCGCGTCCATCTTCAAGAACAGCTCGTTGTGCTCATCTGTGAAGCCTTATTAAACGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR TCA 90 bp GCACGCGACCACAGTGGTAGCCAGGCCAATTCATTTGCTTCACCATaGCGGAAATGGAACATGGTACCTGTGTCTATGAATCGAGTTTTA +
Preference number: 1 (lower is better)
Translates to: ARDHSGSQANSFASP*RKWNMVPVSMNRVL
Trigger: TAAAACTCGATTCATAGACACAGGTACCATGTTCCATTTCCGTCATGGTGAAGCAAATGAATTGGCCTGGCTACCACTGTGGTCGCGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR GCA 90 bp TATCCGTGGAGGAAAGACACACGAACGGGGTTTGATCTCCTCTGCTaGTTTGACGAACAGGAAATGAAAATAGCAAACCGCGAAGGAACA +
Preference number: 1 (lower is better)
Translates to: YPWRKDTRTGFDLLC*FDEQEMKIANREGT
Trigger: TGTTCCTTCGCGGTTTGCTATTTTCATTTCCTGTTCGTCAAAGCAGCAGAGGAGATCAAACCCCGTTCGTGTGTCTTTCCTCCACGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR GCA 90 bp GTCAGATGGCCTACAAGATGCAACCAACTCCCAGGACAACTGTGGTaGTCCAAAAACTCAGGGTTAGGCAGGATGGATATATTCTTGTTC +
Preference number: 1 (lower is better)
Translates to: VRWPTRCNQLPGQLW*SKNSGLGRMDIFLF
Trigger: GAACAAGAATATATCCATCCTGCCTAACCCTGAGTTTTTGGAGCACCACAGTTGTCCTGGGAGTTGGTTGCATCTTGTAGGCCATCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR CCA 90 bp GAAGTCAGATGGCCTACAAGATGCAACCAACTCCCAGGACAACTGTaGTGCTCCAAAAACTCAGGGTTAGGCAGGATGGATATATTCTTG +
Preference number: 1 (lower is better)
Translates to: EVRWPTRCNQLPGQL*CSKNSGLGRMDIFL
Trigger: CAAGAATATATCCATCCTGCCTAACCCTGAGTTTTTGGAGCACCACAGTTGTCCTGGGAGTTGGTTGCATCTTGTAGGCCATCTGACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR GCA 90 bp AATATTTTTGATAACTTTCGGTCATCGAGAACTGCAGACACAGTGTaGTACTCTATTCTGGAATGCCTCCTAGAGAACCTGCAGTCGCAG +
Preference number: 1 (lower is better)
Translates to: NIFDNFRSSRTADTV*YSILECLLENLQSQ
Trigger: CTGCGACTGCAGGTTCTCTAGGAGGCATTCCAGAATAGAGTAGCACACTGTGTCTGCAGTTCTCGATGACCGAAAGTTATCAAAAATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR TCA 90 bp ACTGCTGCACATGCATCAGATGTCATGGTAATAAGTATCTTGTCTTaGCATTCTCCACTAGTGGACTTCAAAGACCAACCTACCTGTAGT +
Preference number: 1 (lower is better)
Translates to: TAAHASDVMVISILS*HSPLVDFKDQPTCS
Trigger: ACTACAGGTAGGTTGGTCTTTGAAGTCCACTAGTGGAGAATGTCAAGACAAGATACTTATTACCATGACATCTGATGCATGTGCAGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR TCA 90 bp TGCTTCCGACGTCGGGCGCCAGCGGTCCCGGCCCCAACGCTGGGCTGTGCTCTCACAACGAGCTGTTCTTaGAGATGGACGCGACCACCA +
Preference number: 2 (lower is better)
Translates to: CFRRRAPAVPAPTLGCALTTSCS*RWTRPP
Trigger: TGGTGGTCGCGTCCATCTTCAAGAACAGCTCGTTGT...GAGAGCACAGCCCAGCGTTGGGGCCGGGACCGCTGGCGCCCGACGTCGGAAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR CAA 90 bp GCAGGGCCACGGGCAGTCTGCCAGGTGGCTCTGGAGCCAAGCCCTTaGGAAAACCTTCAGGGCGACCTGGCTCCTTCACTCACTTCCGAC +
Preference number: 2 (lower is better)
Translates to: AGPRAVCQVALEPSP*ENLQGDLAPSLTSD
Trigger: GTCGGAAGTGAGTGAAGGAGCCAGGTCGCCCTGAAGGTTTTCCAAAGGGCTTGGCTCCAGAGCCACCTGGCAGACTGCCCGTGGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR GCA 90 bp TCACCAGACCCATCATCACAGGCTATGTCACTAAAACTGACCGAAGCGTTTTCCTGGTCTCGGTTCCCCTaGCGGTGGCCGAGGCCGCGG +
Preference number: 2 (lower is better)
Translates to: SPDPSSQAMSLKLTEAFSWSRFP*RWPRPR
Trigger: CCGCGGCCTCGGCCACCGGCAGGGGAACCGAGACCA...GGAAAACGCTTCGGTCAGTTTTAGTGACATAGCCTGTGATGATGGGTCTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR GCA 90 bp GCACAACGAGCTGTTCTTGAAGATGGACGCGACCACCACACGAAGAAACATGCACGAGCCCGGCTGACGTaGGGGGTGCTGGTCTCGGTT +
Preference number: 2 (lower is better)
Translates to: AQRAVLEDGRDHHTKKHARARLT*GVLVSV
Trigger: AACCGAGACCAGCACCCCGCACGTCAGCCGGGCTCG...TGCATGTTTCTTCGTGTGGTGGTCGCGTCCATCTTCAAGAACAGCTCGTTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR TCA 90 bp ACAAAATGTGAGGGCAGTAAAACAATGACCTCCCAAGCTTATCCGTGGAGGAAATGCCGCGAGCCCGGCTaGCGTGCGGGGTGCTGGTCT +
Preference number: 2 (lower is better)
Translates to: TKCEGSKTMTSQAYPWRKCREPG*RAGCWS
Trigger: AGACCAGCACCCCGCACGTCAGCCGGGCTCGCGGCA...TTTCCTCCACGGATAAGCTTGGGAGGTCATTGTTTTACTGCCCTCACATTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR GCA 90 bp CTCAACGGAATCAACAGAATTCCTTTCTCCACATTCCTAAAACTGGGTACCACGGGGCCACGGGCAGTCTaGCAGGTGGCTCTGGAGCCA +
Preference number: 2 (lower is better)
Translates to: LNGINRIPFSTFLKLGTTGPRAV*QVALEP
Trigger: TGGCTCCAGAGCCACCTGGCAGACTGCCCGTGGCCC...CGTGGTACCCAGTTTTAGGAATGTGGAGAAAGGAATTCTGTTGATTCCGTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR GCA 90 bp CGCACTGCCAGACCCGTAGTGGTTTCCTTAATGTGGGTTTACAGTCAATATTGCCCCAACGCTGGGCTGTaGTCTCCTGCGACACGATCC +
Preference number: 2 (lower is better)
Translates to: RTARPVVVSLMWVYSQYCPNAGL*SPATRS
Trigger: GGATCGTGTCGCAGGAGAGCACAGCCCAGCGTTGGG...GCAATATTGACTGTAAACCCACATTAAGGAAACCACTACGGGTCTGGCAGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR CCA 90 bp AATCAACAGAATTCCTTTCTCCACATTCCTAAAACTGGGTACCACGGTCCGCAAAGCAGGACAACGGCCTaGGGCCCGACAGCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: NQQNSFLHIPKTGYHGPQSRTTA*GPTAGP
Trigger: TGGCCCTGCTGTCGGGCCCCAGGCCGTTGTCCTGCT...TTGCGGACCGTGGTACCCAGTTTTAGGAATGTGGAGAAAGGAATTCTGTTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR TCA 90 bp ACTGTGGTGCTCCAAAAACTCAGGGTTAGGCAGGATGGATATATTCTTGTTCAACGTCCCTGCAGTTCCTaGGCCCGACCTGCCTCAGCA +
Preference number: 2 (lower is better)
Translates to: TVVLQKLRVRQDGYILVQRPCSS*ARPASA
Trigger: TGCTGAGGCAGGTCGGGCTCAGGAACTGCAGGGACG...TTGAACAAGAATATATCCATCCTGCCTAACCCTGAGTTTTTGGAGCACCACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR CCA 90 bp TTCCTAAAACTGGGTACCACGGTCCGCAATAATAGTCACCAGACCCATCATCACTCTGCCAGGTGGCTCTaGAGCCAAGCCCTTTGGAAA +
Preference number: 2 (lower is better)
Translates to: FLKLGTTVRNNSHQTHHHSARWL*SQALWK
Trigger: TTTCCAAAGGGCTTGGCTCCAGAGCCACCTGGCAGA...GTGATGATGGGTCTGGTGACTATTATTGCGGACCGTGGTACCCAGTTTTAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR TCA 90 bp ACTGTGGTGCTCCAAAAACTCAGGGTTAGGCAGGATGGATATATTCTTGTTCAAAAGAAACATGCAGAGTaGTCAGCGGCGGGCGTGCCG +
Preference number: 2 (lower is better)
Translates to: TVVLQKLRVRQDGYILVQKKHAE*SAAGVP
Trigger: CGGCACGCCCGCCGCTGATCACTCTGCATGTTTCTT...TTGAACAAGAATATATCCATCCTGCCTAACCCTGAGTTTTTGGAGCACCACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR GCA 90 bp AGACCCATCATCACAGGCTATGTCACTAAAACTGACCGAAGCGTTTTCCAGTTCTTCCTGAGCCCGACCTaGCTCAGCACTGAAGGAAGA +
Preference number: 2 (lower is better)
Translates to: RPIITGYVTKTDRSVFQFFLSPT*LSTEGR
Trigger: TCTTCCTTCAGTGCTGAGGCAGGTCGGGCTCAGGAA...GAACTGGAAAACGCTTCGGTCAGTTTTAGTGACATAGCCTGTGATGATGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR TCA 90 bp CTCAACGGAATCAACAGAATTCCTTTCTCCACATTCCTAAAACTGGGTACCACGGACCTGCCTCAGCACTaGAGGAAGAATCCTGGGAAG +
Preference number: 2 (lower is better)
Translates to: LNGINRIPFSTFLKLGTTDLPQH*RKNPGK
Trigger: CTTCCCAGGATTCTTCCTTCAGTGCTGAGGCAGGTC...CGTGGTACCCAGTTTTAGGAATGTGGAGAAAGGAATTCTGTTGATTCCGTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR GCA 90 bp ACAAAATGTGAGGGCAGTAAAACAATGACCTCCCAAGCTTATCCGTGGAGGAAACCACACGAAGAAACATaGAGAGTGATCAGCGGCGGG +
Preference number: 2 (lower is better)
Translates to: TKCEGSKTMTSQAYPWRKPHEET*RVISGG
Trigger: CCCGCCGCTGATCACTCTGCATGTTTCTTCGTGTGG...TTTCCTCCACGGATAAGCTTGGGAGGTCATTGTTTTACTGCCCTCACATTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR CCA 90 bp CGCACTGCCAGACCCGTAGTGGTTTCCTTAATGTGGGTTTACAGTCAATATTGCTCCCAAGCTTATCCGTaGAGGAAAGACACACGAACG +
Preference number: 2 (lower is better)
Translates to: RTARPVVVSLMWVYSQYCSQAYP*RKDTRT
Trigger: CGTTCGTGTGTCTTTCCTCCACGGATAAGCTTGGGA...GCAATATTGACTGTAAACCCACATTAAGGAAACCACTACGGGTCTGGCAGTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR CCA 90 bp AGGCCAATTCATTTGCTTCACCATGACGGAAATGGAACATGGTACCTGTGTCTATGGAGCCAAGCCCTTTaGAAAACCTTCAGGGCGACC +
Preference number: 2 (lower is better)
Translates to: RPIHLLHHDGNGTWYLCLWSQAL*KTFRAT
Trigger: GGTCGCCCTGAAGGTTTTCCAAAGGGCTTGGCTCCA...TAGACACAGGTACCATGTTCCATTTCCGTCATGGTGAAGCAAATGAATTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR TCA 90 bp TTCCTAAAACTGGGTACCACGGTCCGCAATAATAGTCACCAGACCCATCATCACATAAGGCTTCACAGATaGGCACAACGAGCTGTTCTT +
Preference number: 2 (lower is better)
Translates to: FLKLGTTVRNNSHQTHHHIRLHR*AQRAVL
Trigger: AAGAACAGCTCGTTGTGCTCATCTGTGAAGCCTTAT...GTGATGATGGGTCTGGTGACTATTATTGCGGACCGTGGTACCCAGTTTTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR TCA 90 bp AGACCCATCATCACAGGCTATGTCACTAAAACTGACCGAAGCGTTTTCCAGTTCAACCAGCCGACACGATaGCCCAACTTAGAAAATGCA +
Preference number: 2 (lower is better)
Translates to: RPIITGYVTKTDRSVFQFNQPTR*PNLENA
Trigger: TGCATTTTCTAAGTTGGGTCATCGTGTCGGCTGGTT...GAACTGGAAAACGCTTCGGTCAGTTTTAGTGACATAGCCTGTGATGATGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR TCA 90 bp GTGGTGCTCCAAAAACTCAGGGTTAGGCAGGATGGATATATTCTTGTTCAAAAAGGCGCACTGGGCAGCTaGAGCACTTCTCCTAGATTT +
Preference number: 2 (lower is better)
Translates to: VVLQKLRVRQDGYILVQKGALGS*STSPRF
Trigger: AAATCTAGGAGAAGTGCTTCAGCTGCCCAGTGCGCC...TTTTTGAACAAGAATATATCCATCCTGCCTAACCCTGAGTTTTTGGAGCACCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR TCA 90 bp AGGCCAATTCATTTGCTTCACCATGACGGAAATGGAACATGGTACCTGTGTCTACTCCCAATGACAGAGTaGGCCAGTCCTGCTTCAAAA +
Preference number: 2 (lower is better)
Translates to: RPIHLLHHDGNGTWYLCLLPMTE*ASPASK
Trigger: TTTTGAAGCAGGACTGGCTCACTCTGTCATTGGGAG...TAGACACAGGTACCATGTTCCATTTCCGTCATGGTGAAGCAAATGAATTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR GCA 90 bp CACTGGGCAGCTGAAGCACTTCTCCTAGATTTGCTCTTAACAGAACGAATGCATGGGTTTGATCTCCTCTaGTGCTTTGACGAACAGGAA +
Preference number: 2 (lower is better)
Translates to: HWAAEALLLDLLLTERMHGFDLL*CFDEQE
Trigger: TTCCTGTTCGTCAAAGCAGCAGAGGAGATCAAACCC...ATGCATTCGTTCTGTTAAGAGCAAATCTAGGAGAAGTGCTTCAGCTGCCCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR CCA 90 bp CTACAGATTCCTCAACGGAATCAACAGAATTCCTTTCTCCACATTCCTAAAACTACCTTCAGGGCGACCTaGCTCCTTCACTCACTTCCG +
Preference number: 2 (lower is better)
Translates to: LQIPQRNQQNSFLHIPKTTFRAT*LLHSLP
Trigger: CGGAAGTGAGTGAAGGAGCCAGGTCGCCCTGAAGGT...AGTTTTAGGAATGTGGAGAAAGGAATTCTGTTGATTCCGTTGAGGAATCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR TCA 90 bp TCACCAGACCCATCATCACAGGCTATGTCACTAAAACTGACCGAAGCGTTTTCCTCTCCTCTGCTGCTTTaGCGAACAGGAAATGAAAAT +
Preference number: 2 (lower is better)
Translates to: SPDPSSQAMSLKLTEAFSSPLLL*RTGNEN
Trigger: ATTTTCATTTCCTGTTCGTCAAAGCAGCAGAGGAGA...GGAAAACGCTTCGGTCAGTTTTAGTGACATAGCCTGTGATGATGGGTCTGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR GCA 90 bp AGGCCAATTCATTTGCTTCACCATGACGGAAATGGAACATGGTACCTGTGTCTACCAGGACAACTGTGGTaGTCCAAAAACTCAGGGTTA +
Preference number: 2 (lower is better)
Translates to: RPIHLLHHDGNGTWYLCLPGQLW*SKNSGL
Trigger: TAACCCTGAGTTTTTGGAGCACCACAGTTGTCCTGG...TAGACACAGGTACCATGTTCCATTTCCGTCATGGTGAAGCAAATGAATTGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR CCA 90 bp AATCAACAGAATTCCTTTCTCCACATTCCTAAAACTGGGTACCACGGTCCGCAAAACATTAAAACTCTGTaGTCAGAGCAGGACAACGGC +
Preference number: 2 (lower is better)
Translates to: NQQNSFLHIPKTGYHGPQNIKTL*SEQDNG
Trigger: GCCGTTGTCCTGCTCTGACCACAGAGTTTTAATGTT...TTGCGGACCGTGGTACCCAGTTTTAGGAATGTGGAGAAAGGAATTCTGTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR TCA 90 bp ATTTTAAAGCTTGTCCTTGCTGGGCGTCGATCACATTCAGAGATCAATCTAGAAAGGGCAGTAAAACAATaGCCTCCCAAGCTTATCCGT +
Preference number: 2 (lower is better)
Translates to: ILKLVLAGRRSHSEINLERAVKQ*PPKLIR
Trigger: ACGGATAAGCTTGGGAGGTCATTGTTTTACTGCCCT...TTCTAGATTGATCTCTGAATGTGATCGACGCCCAGCAAGGACAAGCTTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR GCA 90 bp GCAGACATTTTAAAGCTTGTCCTTGCTGGGCGTCGATCACATTCAGAGATCAATTTCTGGCACTTGAAATaGTGGATTTGTTGTCCAGTT +
Preference number: 2 (lower is better)
Translates to: ADILKLVLAGRRSHSEINFWHLK*WICCPV
Trigger: AACTGGACAACAAATCCAGCATTTCAAGTGCCAGAA...ATTGATCTCTGAATGTGATCGACGCCCAGCAAGGACAAGCTTTAAAATGTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR GCA 90 bp GTGGTGCTCCAAAAACTCAGGGTTAGGCAGGATGGATATATTCTTGTTCAAAAATTTGATCTCCTCTGCTaGTTTGACGAACAGGAAATG +
Preference number: 2 (lower is better)
Translates to: VVLQKLRVRQDGYILVQKFDLLC*FDEQEM
Trigger: CATTTCCTGTTCGTCAAAGCAGCAGAGGAGATCAAA...TTTTTGAACAAGAATATATCCATCCTGCCTAACCCTGAGTTTTTGGAGCACCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR TCA 72 bp GATGGACGCGACCACCACACGAAGAAACATGCAGAGTaGTCAGCGGCGGGCGTGCCGCGAGCCCGGCTGACG +
Preference number: 3 (lower is better)
Translates to: DGRDHHTKKHAE*SAAGVPRARLT
Trigger: CGTCAGCCGGGCTCGCGGCACGCCCGCCGCTGATCACTCTGCATGTTTCTTCGTGTGGTGGTCGCGTCCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR CCA 72 bp CGACAGCAGGGCCACGGGCAGTCTGCCAGGTGGCTCTaGAGCCAAGCCCTTTGGAAAACCTTCAGGGCGACC +
Preference number: 3 (lower is better)
Translates to: RQQGHGQSARWL*SQALWKTFRAT
Trigger: GGTCGCCCTGAAGGTTTTCCAAAGGGCTTGGCTCCAGAGCCACCTGGCAGACTGCCCGTGGCCCTGCTGTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR CCA 72 bp ACATTAAAACTCTGTGGTCAGAGCAGGACAACGGCCTaGGGCCCGACAGCAGGGCCACGGGCAGTCTGCCAG +
Preference number: 3 (lower is better)
Translates to: TLKLCGQSRTTA*GPTAGPRAVCQ
Trigger: CTGGCAGACTGCCCGTGGCCCTGCTGTCGGGCCCCAGGCCGTTGTCCTGCTCTGACCACAGAGTTTTAATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR CCA 72 bp GGGCAGTCTGCCAGGTGGCTCTGGAGCCAAGCCCTTTaGAAAACCTTCAGGGCGACCTGGCTCCTTCACTCA +
Preference number: 3 (lower is better)
Translates to: GQSARWLWSQAL*KTFRATWLLHS
Trigger: TGAGTGAAGGAGCCAGGTCGCCCTGAAGGTTTTCCAAAGGGCTTGGCTCCAGAGCCACCTGGCAGACTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR TCA 72 bp CAAACCGCAAGCGCATGTTCACGTCCCTGCAGTTCCTaGGCCCGACCTGCCTCAGCACTGAAGGAAGAATCC +
Preference number: 3 (lower is better)
Translates to: QTASACSRPCSS*ARPASALKEES
Trigger: GGATTCTTCCTTCAGTGCTGAGGCAGGTCGGGCTCAGGAACTGCAGGGACGTGAACATGCGCTTGCGGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR GCA 72 bp TGTTGTGGCAGAATACACTTGCATAGTATACCTGTATaGTTCCGACGTCGGGCGCCAGCGGTCCCGGCCCCA +
Preference number: 3 (lower is better)
Translates to: CCGRIHLHSIPV*FRRRAPAVPAP
Trigger: TGGGGCCGGGACCGCTGGCGCCCGACGTCGGAAGCATACAGGTATACTATGCAAGTGTATTCTGCCACAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR TCA 72 bp CCTAGAGAACCTGCAGTCGCAGCTGACAGCTCCCAATaGCAGAGTGAGCCAGTCCTGCTTCAAAAGGGCAGA +
Preference number: 3 (lower is better)
Translates to: PREPAVAADSSQ*QSEPVLLQKGR
Trigger: TCTGCCCTTTTGAAGCAGGACTGGCTCACTCTGTCATTGGGAGCTGTCAGCTGCGACTGCAGGTTCTCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR CCA 72 bp GCGACACGATCCGTTAAAACACTCCCCACGGCGCACTaGGCAGCTGAAGCACTTCTCCTAGATTTGCTCTTA +
Preference number: 3 (lower is better)
Translates to: ATRSVKTLPTAH*AAEALLLDLLL
Trigger: TAAGAGCAAATCTAGGAGAAGTGCTTCAGCTGCCCAGTGCGCCGTGGGGAGTGTTTTAACGGATCGTGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR GCA 72 bp CAGCTGACAGCTCCCAATGACAGAGTGAGCCAGTCCTaGTTCAAAAGGGCAGACCGCAGACATTTTAAAGCT +
Preference number: 3 (lower is better)
Translates to: QLTAPNDRVSQS*FKRADRRHFKA
Trigger: AGCTTTAAAATGTCTGCGGTCTGCCCTTTTGAAGCAGGACTGGCTCACTCTGTCATTGGGAGCTGTCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR GCA 72 bp AGAACTGCAGACACAGTGTGCTACTCTATTCTGGAATaGCTCCTAGAGAACCTGCAGTCGCAGCTGACAGCT +
Preference number: 3 (lower is better)
Translates to: RTADTVCYSILE*LLENLQSQLTA
Trigger: AGCTGTCAGCTGCGACTGCAGGTTCTCTAGGAGGCATTCCAGAATAGAGTAGCACACTGTGTCTGCAGTTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR CCA 72 bp GAGGGCAGTAAAACAATGACCTCCCAAGCTTATCCGTaGAGGAAAGACACACGAACGGGGTTTGATCTCCTC +
Preference number: 3 (lower is better)
Translates to: EGSKTMTSQAYP*RKDTRTGFDLL
Trigger: GAGGAGATCAAACCCCGTTCGTGTGTCTTTCCTCCACGGATAAGCTTGGGAGGTCATTGTTTTACTGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR CAA 90 bp AGGCCAATTCATTTGCTTCACCATGACGGAAATGGAACATGGTACCTGTGTCTACTGGAGCCAAGCCCTTaGGAAAACCTTCAGGGCGAC +
Preference number: 3 (lower is better)
Translates to: RPIHLLHHDGNGTWYLCLLEPSP*ENLQGD
Trigger: GTCGCCCTGAAGGTTTTCCAAAGGGCTTGGCTCCAG...TAGACACAGGTACCATGTTCCATTTCCGTCATGGTGAAGCAAATGAATTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR CAA 90 bp AATCAACAGAATTCCTTTCTCCACATTCCTAAAACTGGGTACCACGGTCCGCAACACAACGAGCTGTTCTaGAAGATGGACGCGACCACC +
Preference number: 3 (lower is better)
Translates to: NQQNSFLHIPKTGYHGPQHNELF*KMDATT
Trigger: GGTGGTCGCGTCCATCTTCAAGAACAGCTCGTTGTG...TTGCGGACCGTGGTACCCAGTTTTAGGAATGTGGAGAAAGGAATTCTGTTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR TCA 72 bp AATAAGGCTTCACAGATGAGCACAACGAGCTGTTCTTaGAGATGGACGCGACCACCACACGAAGAAACATGC +
Preference number: 3 (lower is better)
Translates to: NKASQMSTTSCS*RWTRPPHEETC
Trigger: GCATGTTTCTTCGTGTGGTGGTCGCGTCCATCTTCAAGAACAGCTCGTTGTGCTCATCTGTGAAGCCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR GCA 72 bp GTAACAAAGACAGTGGTTGTTGTGGCAGAATACACTTaGATAGTATACCTGTATGCTTCCGACGTCGGGCGC +
Preference number: 3 (lower is better)
Translates to: VTKTVVVVAEYT*IVYLYASDVGR
Trigger: GCGCCCGACGTCGGAAGCATACAGGTATACTATGCAAGTGTATTCTGCCACAACAACCACTGTCTTTGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR CAA 90 bp ACTGTGGTGCTCCAAAAACTCAGGGTTAGGCAGGATGGATATATTCTTGTTCAAACACACGAACGGGGTTaGATCTCCTCTGCTGCTTTG +
Preference number: 3 (lower is better)
Translates to: TVVLQKLRVRQDGYILVQTHERG*ISSAAL
Trigger: CAAAGCAGCAGAGGAGATCAAACCCCGTTCGTGTGT...TTGAACAAGAATATATCCATCCTGCCTAACCCTGAGTTTTTGGAGCACCACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR CAA 90 bp CGCACTGCCAGACCCGTAGTGGTTTCCTTAATGTGGGTTTACAGTCAATATTGCCAAAGACAGTGGTTGTaGTGGCAGAATACACTTGCA +
Preference number: 3 (lower is better)
Translates to: RTARPVVVSLMWVYSQYCQRQWL*WQNTLA
Trigger: TGCAAGTGTATTCTGCCACAACAACCACTGTCTTTG...GCAATATTGACTGTAAACCCACATTAAGGAAACCACTACGGGTCTGGCAGTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR GCA 72 bp GATAACTTTCGGTCATCGAGAACTGCAGACACAGTGTaGTACTCTATTCTGGAATGCCTCCTAGAGAACCTG +
Preference number: 3 (lower is better)
Translates to: DNFRSSRTADTV*YSILECLLENL
Trigger: CAGGTTCTCTAGGAGGCATTCCAGAATAGAGTAGCACACTGTGTCTGCAGTTCTCGATGACCGAAAGTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR CCA 72 bp AGGGCAGACCGCAGACATTTTAAAGCTTGTCCTTGCTaGGCGTCGATCACATTCAGAGATCAATCTAGAACT +
Preference number: 3 (lower is better)
Translates to: RADRRHFKACPC*ASITFRDQSRT
Trigger: AGTTCTAGATTGATCTCTGAATGTGATCGACGCCCAGCAAGGACAAGCTTTAAAATGTCTGCGGTCTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR TCA 72 bp AGAAAACAACGTCCACGTTTAATAAGGCTTCACAGATaGGCACAACGAGCTGTTCTTGAAGATGGACGCGAC +
Preference number: 3 (lower is better)
Translates to: RKQRPRLIRLHR*AQRAVLEDGRD
Trigger: GTCGCGTCCATCTTCAAGAACAGCTCGTTGTGCTCATCTGTGAAGCCTTATTAAACGTGGACGTTGTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR TCA 72 bp CACAGTGGTAGCCAGGCCAATTCATTTGCTTCACCATaGCGGAAATGGAACATGGTACCTGTGTCTATGAAT +
Preference number: 3 (lower is better)
Translates to: HSGSQANSFASP*RKWNMVPVSMN
Trigger: ATTCATAGACACAGGTACCATGTTCCATTTCCGTCATGGTGAAGCAAATGAATTGGCCTGGCTACCACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR GCA 72 bp TGGAGGAAAGACACACGAACGGGGTTTGATCTCCTCTaGTGCTTTGACGAACAGGAAATGAAAATAGCAAAC +
Preference number: 3 (lower is better)
Translates to: WRKDTRTGFDLL*CFDEQEMKIAN
Trigger: GTTTGCTATTTTCATTTCCTGTTCGTCAAAGCAGCAGAGGAGATCAAACCCCGTTCGTGTGTCTTTCCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR GCA 72 bp AAAAGGGCAGACCGCAGACATTTTAAAGCTTGTCCTTaGTGGGCGTCGATCACATTCAGAGATCAATCTAGA +
Preference number: 3 (lower is better)
Translates to: KRADRRHFKACP*WASITFRDQSR
Trigger: TCTAGATTGATCTCTGAATGTGATCGACGCCCAGCAAGGACAAGCTTTAAAATGTCTGCGGTCTGCCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR-3UTR CAA 90 bp ACTGTGGTGCTCCAAAAACTCAGGGTTAGGCAGGATGGATATATTCTTGTTCAATGTGGCAGAATACACTaGCATAGTATACCTGTATGC +
Preference number: 3 (lower is better)
Translates to: TVVLQKLRVRQDGYILVQCGRIH*HSIPVC
Trigger: GCATACAGGTATACTATGCAAGTGTATTCTGCCACA...TTGAACAAGAATATATCCATCCTGCCTAACCCTGAGTTTTTGGAGCACCACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR GCA 72 bp TTCAGAGATCAATCTAGAACTCCCCACTGCTGCACATaGATCAGATGTCATGGTAATAAGTATCTTGTCTTG +
Preference number: 3 (lower is better)
Translates to: FRDQSRTPHCCT*IRCHGNKYLVL
Trigger: CAAGACAAGATACTTATTACCATGACATCTGATGCATGTGCAGCAGTGGGGAGTTCTAGATTGATCTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR TCA 72 bp CATGCATCAGATGTCATGGTAATAAGTATCTTGTCTTaGCATTCTCCACTAGTGGACTTCAAAGACCAACCT +
Preference number: 3 (lower is better)
Translates to: HASDVMVISILS*HSPLVDFKDQP
Trigger: AGGTTGGTCTTTGAAGTCCACTAGTGGAGAATGTCAAGACAAGATACTTATTACCATGACATCTGATGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp TGCTTCCGACGTCGGGCGCCAGCGGTCCCGGCCCCAACGCTGGGCTGTGCTCTCGGGTGGAACTGGTGCTaGGACGGGGAGCCGGCGGGC +
Preference number: 4 (lower is better)
Translates to: CFRRRAPAVPAPTLGCALGWNWC*DGEPAG
Trigger: GCCCGCCGGCTCCCCGTCGCAGCACCAGTTCCACCC...GAGAGCACAGCCCAGCGTTGGGGCCGGGACCGCTGGCGCCCGACGTCGGAAGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp TGCTTCCGACGTCGGGCGCCAGCGGTCCCGGCCCCAACGCTGGGCTGTGCTCTCCCCGGGTGGAACTGGTaGTGCGACGGGGAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: CFRRRAPAVPAPTLGCALPGWNW*CDGEPA
Trigger: CGCCGGCTCCCCGTCGCAGCACCAGTTCCACCCGGG...GAGAGCACAGCCCAGCGTTGGGGCCGGGACCGCTGGCGCCCGACGTCGGAAGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp TGCTTCCGACGTCGGGCGCCAGCGGTCCCGGCCCCAACGCTGGGCTGTGCTCTCAGCGACGGCGACTTGTaGAAGCGCCGCGCGCCCTCG +
Preference number: 4 (lower is better)
Translates to: CFRRRAPAVPAPTLGCALSDGDL*KRRAPS
Trigger: CGAGGGCGCGCGGCGCTTGCACAAGTCGCCGTCGCT...GAGAGCACAGCCCAGCGTTGGGGCCGGGACCGCTGGCGCCCGACGTCGGAAGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp TCCGACGTCGGGCGCCAGCGGTCCCGGCCCCAACGCTGGGCTGTGCTCTCCTGCCCGGTGCGGTTATACTaGTGGTGTCCCCTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: SDVGRQRSRPQRWAVLSCPVRLY*WCPLLP
Trigger: GGGCAACAGGGGACACCACCAGTATAACCGCACCGG...GCAGGAGAGCACAGCCCAGCGTTGGGGCCGGGACCGCTGGCGCCCGACGTCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp TCCGACGTCGGGCGCCAGCGGTCCCGGCCCCAACGCTGGGCTGTGCTCTCCTGCTCGGGCTCTCGGTTCTaGGTCTGCTCCCCATTGCAT +
Preference number: 4 (lower is better)
Translates to: SDVGRQRSRPQRWAVLSCSGSRF*VCSPLH
Trigger: ATGCAATGGGGAGCAGACGCAGAACCGAGAGCCCGA...GCAGGAGAGCACAGCCCAGCGTTGGGGCCGGGACCGCTGGCGCCCGACGTCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp TCCGACGTCGGGCGCCAGCGGTCCCGGCCCCAACGCTGGGCTGTGCTCTCCTGCTTCGGCGTCTCTGTTTaGATAGGACCTGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: SDVGRQRSRPQRWAVLSCFGVSV*IGPGQR
Trigger: CCGCTGGCCAGGTCCTATCCAAACAGAGACGCCGAA...GCAGGAGAGCACAGCCCAGCGTTGGGGCCGGGACCGCTGGCGCCCGACGTCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp TCCGACGTCGGGCGCCAGCGGTCCCGGCCCCAACGCTGGGCTGTGCTCTCCTGCGCCGGGGAAGACATGTaGTGGACGGCTTTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: SDVGRQRSRPQRWAVLSCAGEDM*WTAFKD
Trigger: GTCTTTGAAAGCCGTCCACCACATGTCTTCCCCGGC...GCAGGAGAGCACAGCCCAGCGTTGGGGCCGGGACCGCTGGCGCCCGACGTCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp TCCGACGTCGGGCGCCAGCGGTCCCGGCCCCAACGCTGGGCTGTGCTCTCCTGCACAACGAGCTGTTCTTaGAGATGGACGCGACCACCA +
Preference number: 4 (lower is better)
Translates to: SDVGRQRSRPQRWAVLSCTTSCS*RWTRPP
Trigger: TGGTGGTCGCGTCCATCTTCAAGAACAGCTCGTTGT...GCAGGAGAGCACAGCCCAGCGTTGGGGCCGGGACCGCTGGCGCCCGACGTCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp TGCTTCCGACGTCGGGCGCCAGCGGTCCCGGCCCCAACGCTGGGCTGTGCTCTCGGCGCACTGGGCAGCTaGAGCACTTCTCCTAGATTT +
Preference number: 4 (lower is better)
Translates to: CFRRRAPAVPAPTLGCALGALGS*STSPRF
Trigger: AAATCTAGGAGAAGTGCTTCAGCTGCCCAGTGCGCC...GAGAGCACAGCCCAGCGTTGGGGCCGGGACCGCTGGCGCCCGACGTCGGAAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp TGCTTCCGACGTCGGGCGCCAGCGGTCCCGGCCCCAACGCTGGGCTGTGCTCTCAGAGTGAGCCAGTCCTaGTTCAAAAGGGCAGACCGC +
Preference number: 4 (lower is better)
Translates to: CFRRRAPAVPAPTLGCALRVSQS*FKRADR
Trigger: GCGGTCTGCCCTTTTGAAGCAGGACTGGCTCACTCT...GAGAGCACAGCCCAGCGTTGGGGCCGGGACCGCTGGCGCCCGACGTCGGAAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp TCCGACGTCGGGCGCCAGCGGTCCCGGCCCCAACGCTGGGCTGTGCTCTCCTGCTCGGTCATCGAGAACTaGAGACACAGTGTGCTACTC +
Preference number: 4 (lower is better)
Translates to: SDVGRQRSRPQRWAVLSCSVIEN*RHSVLL
Trigger: GAGTAGCACACTGTGTCTGCAGTTCTCGATGACCGA...GCAGGAGAGCACAGCCCAGCGTTGGGGCCGGGACCGCTGGCGCCCGACGTCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp TGCTTCCGACGTCGGGCGCCAGCGGTCCCGGCCCCAACGCTGGGCTGTGCTCTCTCAGTGTTCTGGAAGTaGTGGGCTGAGGTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: CFRRRAPAVPAPTLGCALSVFWK*WAEVCH
Trigger: GTGGCAAACCTCAGCCCACCACTTCCAGAACACTGA...GAGAGCACAGCCCAGCGTTGGGGCCGGGACCGCTGGCGCCCGACGTCGGAAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp TGCTTCCGACGTCGGGCGCCAGCGGTCCCGGCCCCAACGCTGGGCTGTGCTCTCGGGGAAGACATGTGGTaGACGGCTTTCAAAGACGCA +
Preference number: 4 (lower is better)
Translates to: CFRRRAPAVPAPTLGCALGEDMW*TAFKDA
Trigger: TGCGTCTTTGAAAGCCGTCCACCACATGTCTTCCCC...GAGAGCACAGCCCAGCGTTGGGGCCGGGACCGCTGGCGCCCGACGTCGGAAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp TCCGACGTCGGGCGCCAGCGGTCCCGGCCCCAACGCTGGGCTGTGCTCTCCTGCTCATTTGCTTCACCATaGCGGAAATGGAACATGGTA +
Preference number: 4 (lower is better)
Translates to: SDVGRQRSRPQRWAVLSCSFASP*RKWNMV
Trigger: TACCATGTTCCATTTCCGTCATGGTGAAGCAAATGA...GCAGGAGAGCACAGCCCAGCGTTGGGGCCGGGACCGCTGGCGCCCGACGTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR CAA 72 bp CGGGCAGTCTGCCAGGTGGCTCTGGAGCCAAGCCCTTaGGAAAACCTTCAGGGCGACCTGGCTCCTTCACTC +
Preference number: 4 (lower is better)
Translates to: RAVCQVALEPSP*ENLQGDLAPSL
Trigger: GAGTGAAGGAGCCAGGTCGCCCTGAAGGTTTTCCAAAGGGCTTGGCTCCAGAGCCACCTGGCAGACTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp AGCCCTTTGGAAAACCTTCAGGGCGACCTGGCTCCTTCACTCACTTCCGACCAATTGGCCGGCCCCTTCTaGTCGGGCTGGATCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SPLENLQGDLAPSLTSDQLAGPF*SGWIQA
Trigger: GGCCTGGATCCAGCCCGAGCAGAAGGGGCCGGCCAA...TTGGTCGGAAGTGAGTGAAGGAGCCAGGTCGCCCTGAAGGTTTTCCAAAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp CTGCGACACGATCCGTTAAAACACTCCCCACGGCGCACTGGGCAGCTGAAGCACCTGGCGCTTGCAGACTaGACTGGTAAACACTGGGCG +
Preference number: 4 (lower is better)
Translates to: LRHDPLKHSPRRTGQLKHLALAD*TGKHWA
Trigger: CGCCCAGTGTTTACCAGTTCAGTCTGCAAGCGCCAG...GTGCTTCAGCTGCCCAGTGCGCCGTGGGGAGTGTTTTAACGGATCGTGTCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp GCACAACGAGCTGTTCTTGAAGATGGACGCGACCACCACACGAAGAAACATGCACGACCCGGGTGGAACTaGTGCTGCGACGGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: AQRAVLEDGRDHHTKKHARPGWN*CCDGEP
Trigger: CGGCTCCCCGTCGCAGCACCAGTTCCACCCGGGTCG...TGCATGTTTCTTCGTGTGGTGGTCGCGTCCATCTTCAAGAACAGCTCGTTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp AGACCCATCATCACAGGCTATGTCACTAAAACTGACCGAAGCGTTTTCCAGTTCCGCCGTCGGCGAAGTTaGAGAAGGCGCCGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: RPIITGYVTKTDRSVFQFRRRRS*RRRRRG
Trigger: GCCGCGGCGGCGCCTTCTTCAACTTCGCCGACGGCG...GAACTGGAAAACGCTTCGGTCAGTTTTAGTGACATAGCCTGTGATGATGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp AGCCCTTTGGAAAACCTTCAGGGCGACCTGGCTCCTTCACTCACTTCCGACCAACCTTGGGTGTGGCCGTaGGAGCCCTTCATGGACAGT +
Preference number: 4 (lower is better)
Translates to: SPLENLQGDLAPSLTSDQPWVWP*EPFMDS
Trigger: ACTGTCCATGAAGGGCTCTCACGGCCACACCCAAGG...TTGGTCGGAAGTGAGTGAAGGAGCCAGGTCGCCCTGAAGGTTTTCCAAAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp CACTGGGCAGCTGAAGCACTTCTCCTAGATTTGCTCTTAACAGAACGAATGCATTGGTCTCGGTTCCCCTaGCGGTGGCCGAGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: HWAAEALLLDLLLTERMHWSRFP*RWPRPR
Trigger: CCGCGGCCTCGGCCACCGGCAGGGGAACCGAGACCA...ATGCATTCGTTCTGTTAAGAGCAAATCTAGGAGAAGTGCTTCAGCTGCCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp CGCACTGCCAGACCCGTAGTGGTTTCCTTAATGTGGGTTTACAGTCAATATTGCGGTGGTGTCCCCTGTTaGCCACAGGGGGCCGCACAC +
Preference number: 4 (lower is better)
Translates to: RTARPVVVSLMWVYSQYCGGVPC*PQGAAH
Trigger: GTGTGCGGCCCCCTGTGGGCAACAGGGGACACCACC...GCAATATTGACTGTAAACCCACATTAAGGAAACCACTACGGGTCTGGCAGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp GCACAACGAGCTGTTCTTGAAGATGGACGCGACCACCACACGAAGAAACATGCACCTGCTGTCCATGCCTaGCGACGGGTGGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: AQRAVLEDGRDHHTKKHAPAVHA*RRVGFA
Trigger: AGCAAAGCCCACCCGTCGCCAGGCATGGACAGCAGG...TGCATGTTTCTTCGTGTGGTGGTCGCGTCCATCTTCAAGAACAGCTCGTTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp ACTGTGGTGCTCCAAAAACTCAGGGTTAGGCAGGATGGATATATTCTTGTTCAACGGCGGCGGCGGCGGTaGAAAGACACTCTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: TVVLQKLRVRQDGYILVQRRRRR*KDTLGG
Trigger: GCCGCCGAGAGTGTCTTTTCACCGCCGCCGCCGCCG...TTGAACAAGAATATATCCATCCTGCCTAACCCTGAGTTTTTGGAGCACCACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp ACAAAATGTGAGGGCAGTAAAACAATGACCTCCCAAGCTTATCCGTGGAGGAAACCGCGGCCCACGCCCTaGGAGGTCTCCCAGATCTGC +
Preference number: 4 (lower is better)
Translates to: TKCEGSKTMTSQAYPWRKPRPTP*EVSQIC
Trigger: GCAGATCTGGGAGACCTCGCAGGGCGTGGGCCGCGG...TTTCCTCCACGGATAAGCTTGGGAGGTCATTGTTTTACTGCCCTCACATTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp ACAAAATGTGAGGGCAGTAAAACAATGACCTCCCAAGCTTATCCGTGGAGGAAAAGCCGGGGCTCTCGGTaGCCGACTCCGCGTTGGACG +
Preference number: 4 (lower is better)
Translates to: TKCEGSKTMTSQAYPWRKSRGSR*PTPRWT
Trigger: CGTCCAACGCGGAGTCGGGCACCGAGAGCCCCGGCT...TTTCCTCCACGGATAAGCTTGGGAGGTCATTGTTTTACTGCCCTCACATTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp CACTGGGCAGCTGAAGCACTTCTCCTAGATTTGCTCTTAACAGAACGAATGCATGGGCCACGGGCAGTCTaGCAGGTGGCTCTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: HWAAEALLLDLLLTERMHGPRAV*QVALEP
Trigger: TGGCTCCAGAGCCACCTGGCAGACTGCCCGTGGCCC...ATGCATTCGTTCTGTTAAGAGCAAATCTAGGAGAAGTGCTTCAGCTGCCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp CTGCGACACGATCCGTTAAAACACTCCCCACGGCGCACTGGGCAGCTGAAGCACCCCCACTGCTGCACATaGATCAGATGTCATGGTAAT +
Preference number: 4 (lower is better)
Translates to: LRHDPLKHSPRRTGQLKHPHCCT*IRCHGN
Trigger: ATTACCATGACATCTGATGCATGTGCAGCAGTGGGG...GTGCTTCAGCTGCCCAGTGCGCCGTGGGGAGTGTTTTAACGGATCGTGTCGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp CTGCGACACGATCCGTTAAAACACTCCCCACGGCGCACTGGGCAGCTGAAGCACTCTAGAACTCCCCACTaGTGCACATGCATCAGATGT +
Preference number: 4 (lower is better)
Translates to: LRHDPLKHSPRRTGQLKHSRTPH*CTCIRC
Trigger: ACATCTGATGCATGTGCAGCAGTGGGGAGTTCTAGA...GTGCTTCAGCTGCCCAGTGCGCCGTGGGGAGTGTTTTAACGGATCGTGTCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp TTCCTAAAACTGGGTACCACGGTCCGCAATAATAGTCACCAGACCCATCATCACGGCTCGAGAGCGGGTTaGGGGACGCTGAGGGAATGG +
Preference number: 4 (lower is better)
Translates to: FLKLGTTVRNNSHQTHHHGSRAG*GTLREW
Trigger: CCATTCCCTCAGCGTCCCCCAACCCGCTCTCGAGCC...GTGATGATGGGTCTGGTGACTATTATTGCGGACCGTGGTACCCAGTTTTAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp AGACCCATCATCACAGGCTATGTCACTAAAACTGACCGAAGCGTTTTCCAGTTCTCCCGGCCCCAACGCTaGGCTGTGCTCTCCTGCGAC +
Preference number: 4 (lower is better)
Translates to: RPIITGYVTKTDRSVFQFSRPQR*AVLSCD
Trigger: GTCGCAGGAGAGCACAGCCCAGCGTTGGGGCCGGGA...GAACTGGAAAACGCTTCGGTCAGTTTTAGTGACATAGCCTGTGATGATGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp TTCCTAAAACTGGGTACCACGGTCCGCAATAATAGTCACCAGACCCATCATCACCCAGCGCCGGCGAGTTaGGGCAGAAATAGGACGCGA +
Preference number: 4 (lower is better)
Translates to: FLKLGTTVRNNSHQTHHHPAPAS*GRNRTR
Trigger: TCGCGTCCTATTTCTGCCTCAACTCGCCGGCGCTGG...GTGATGATGGGTCTGGTGACTATTATTGCGGACCGTGGTACCCAGTTTTAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp ATTTTAAAGCTTGTCCTTGCTGGGCGTCGATCACATTCAGAGATCAATCTAGAATGCCGCGAGCCCGGCTaGCGTGCGGGGTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: ILKLVLAGRRSHSEINLECREPG*RAGCWS
Trigger: AGACCAGCACCCCGCACGTCAGCCGGGCTCGCGGCA...TTCTAGATTGATCTCTGAATGTGATCGACGCCCAGCAAGGACAAGCTTTAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp GCACAACGAGCTGTTCTTGAAGATGGACGCGACCACCACACGAAGAAACATGCAACCTGCAGTCGCAGCTaGCAGCTCCCAATGACAGAG +
Preference number: 4 (lower is better)
Translates to: AQRAVLEDGRDHHTKKHATCSRS*QLPMTE
Trigger: CTCTGTCATTGGGAGCTGTCAGCTGCGACTGCAGGT...TGCATGTTTCTTCGTGTGGTGGTCGCGTCCATCTTCAAGAACAGCTCGTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp GCACAACGAGCTGTTCTTGAAGATGGACGCGACCACCACACGAAGAAACATGCATGGTGGGCTGAGGTTTaGCACTGGGCATTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: AQRAVLEDGRDHHTKKHAWWAEV*HWALAR
Trigger: CCTTGCCAATGCCCAGTGGCAAACCTCAGCCCACCA...TGCATGTTTCTTCGTGTGGTGGTCGCGTCCATCTTCAAGAACAGCTCGTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp AGCCCTTTGGAAAACCTTCAGGGCGACCTGGCTCCTTCACTCACTTCCGACCAACTACACCAGCTTGTCTaGAAGGAACAGGAGCAACCC +
Preference number: 4 (lower is better)
Translates to: SPLENLQGDLAPSLTSDQLHQLV*KEQEQP
Trigger: GGGTTGCTCCTGTTCCTTGCAGACAAGCTGGTGTAG...TTGGTCGGAAGTGAGTGAAGGAGCCAGGTCGCCCTGAAGGTTTTCCAAAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp GCACAACGAGCTGTTCTTGAAGATGGACGCGACCACCACACGAAGAAACATGCAGCCAACGTCATTCCCTaGCAGCAGGGGGTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: AQRAVLEDGRDHHTKKHAANVIP*QQGVLN
Trigger: ATTGAGGACCCCCTGCTGCCAGGGAATGACGTTGGC...TGCATGTTTCTTCGTGTGGTGGTCGCGTCCATCTTCAAGAACAGCTCGTTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp TTCCTAAAACTGGGTACCACGGTCCGCAATAATAGTCACCAGACCCATCATCACATGCCTGGCGACGGGTaGGCTTTGCTGCCCCACTTC +
Preference number: 4 (lower is better)
Translates to: FLKLGTTVRNNSHQTHHHMPGDG*ALLPHF
Trigger: GAAGTGGGGCAGCAAAGCCCACCCGTCGCCAGGCAT...GTGATGATGGGTCTGGTGACTATTATTGCGGACCGTGGTACCCAGTTTTAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp AGAGATCAATCTAGAACTCCCCACTGCTGCACATGCATCAGATGTCATGGTAATAGCAGGACAACGGCCTaGGGCCCGACAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RDQSRTPHCCTCIRCHGNSRTTA*GPTAGP
Trigger: TGGCCCTGCTGTCGGGCCCCAGGCCGTTGTCCTGCT...ATTACCATGACATCTGATGCATGTGCAGCAGTGGGGAGTTCTAGATTGATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp AGCCCTTTGGAAAACCTTCAGGGCGACCTGGCTCCTTCACTCACTTCCGACCAACTCCCAGGACAACTGTaGTGCTCCAAAAACTCAGGG +
Preference number: 4 (lower is better)
Translates to: SPLENLQGDLAPSLTSDQLPGQL*CSKNSG
Trigger: CCCTGAGTTTTTGGAGCACCACAGTTGTCCTGGGAG...TTGGTCGGAAGTGAGTGAAGGAGCCAGGTCGCCCTGAAGGTTTTCCAAAGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp CACTGGGCAGCTGAAGCACTTCTCCTAGATTTGCTCTTAACAGAACGAATGCATTGGGTAAGCCGGCCATaGGAGGAGCTGGCGCTTGCA +
Preference number: 4 (lower is better)
Translates to: HWAAEALLLDLLLTERMHWVSRP*EELALA
Trigger: TGCAAGCGCCAGCTCCTCTCATGGCCGGCTTACCCA...ATGCATTCGTTCTGTTAAGAGCAAATCTAGGAGAAGTGCTTCAGCTGCCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp CTACAGATTCCTCAACGGAATCAACAGAATTCCTTTCTCCACATTCCTAAAACTCGAGCCCCGGCCTCCTaGTCTAGCCGCGCTCCCGTC +
Preference number: 4 (lower is better)
Translates to: LQIPQRNQQNSFLHIPKTRAPAS*SSRAPV
Trigger: GACGGGAGCGCGGCTAGAGCAGGAGGCCGGGGCTCG...AGTTTTAGGAATGTGGAGAAAGGAATTCTGTTGATTCCGTTGAGGAATCTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp CAATCTAGAACTCCCCACTGCTGCACATGCATCAGATGTCATGGTAATAAGTATCGAGCCCGGCTGACGTaGGGGGTGCTGGTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: QSRTPHCCTCIRCHGNKYRARLT*GVLVSV
Trigger: AACCGAGACCAGCACCCCGCACGTCAGCCGGGCTCG...ATACTTATTACCATGACATCTGATGCATGTGCAGCAGTGGGGAGTTCTAGATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp CACTGGGCAGCTGAAGCACTTCTCCTAGATTTGCTCTTAACAGAACGAATGCATCCCAACGCTGGGCTGTaGTCTCCTGCGACACGATCC +
Preference number: 4 (lower is better)
Translates to: HWAAEALLLDLLLTERMHPNAGL*SPATRS
Trigger: GGATCGTGTCGCAGGAGAGCACAGCCCAGCGTTGGG...ATGCATTCGTTCTGTTAAGAGCAAATCTAGGAGAAGTGCTTCAGCTGCCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp AACAGAATTCCTTTCTCCACATTCCTAAAACTGGGTACCACGGTCCGCAATAATCCAGCGAGGCGCTGCTaGAGGACGACGACGAGCAGC +
Preference number: 4 (lower is better)
Translates to: NRIPFSTFLKLGTTVRNNPARRC*RTTTSS
Trigger: GCTGCTCGTCGTCGTCCTCCAGCAGCGCCTCGCTGG...ATTATTGCGGACCGTGGTACCCAGTTTTAGGAATGTGGAGAAAGGAATTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp CAATCTAGAACTCCCCACTGCTGCACATGCATCAGATGTCATGGTAATAAGTATTTCCGGCGACCCGGGTaGAACTGGTGCTGCGACGGG +
Preference number: 4 (lower is better)
Translates to: QSRTPHCCTCIRCHGNKYFRRPG*NWCCDG
Trigger: CCCGTCGCAGCACCAGTTCCACCCGGGTCGCCGGAA...ATACTTATTACCATGACATCTGATGCATGTGCAGCAGTGGGGAGTTCTAGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp AGACCCATCATCACAGGCTATGTCACTAAAACTGACCGAAGCGTTTTCCAGTTCCTCCCCACGGCGCACTaGGCAGCTGAAGCACTTCTC +
Preference number: 4 (lower is better)
Translates to: RPIITGYVTKTDRSVFQFLPTAH*AAEALL
Trigger: GAGAAGTGCTTCAGCTGCCCAGTGCGCCGTGGGGAG...GAACTGGAAAACGCTTCGGTCAGTTTTAGTGACATAGCCTGTGATGATGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp AATCAACAGAATTCCTTTCTCCACATTCCTAAAACTGGGTACCACGGTCCGCAAGGCTCAGCCACGTTGTaGTTCCGCAGGGCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: NQQNSFLHIPKTGYHGPQGSATL*FRRACS
Trigger: GGAGCAAGCCCTGCGGAAGCACAACGTGGCTGAGCC...TTGCGGACCGTGGTACCCAGTTTTAGGAATGTGGAGAAAGGAATTCTGTTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp TTCCTAAAACTGGGTACCACGGTCCGCAATAATAGTCACCAGACCCATCATCACGCAGGGGGTCCTCAATaGACAGCATCGACGGTCTGT +
Preference number: 4 (lower is better)
Translates to: FLKLGTTVRNNSHQTHHHAGGPQ*TASTVC
Trigger: ACAGACCGTCGATGCTGTGCATTGAGGACCCCCTGC...GTGATGATGGGTCTGGTGACTATTATTGCGGACCGTGGTACCCAGTTTTAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp GTGGTGCTCCAAAAACTCAGGGTTAGGCAGGATGGATATATTCTTGTTCAAAAACCCTTCTGCTCGGGCTaGATCCAGGCCACGCGCGGA +
Preference number: 4 (lower is better)
Translates to: VVLQKLRVRQDGYILVQKPFCSG*IQATRG
Trigger: TCCGCGCGTGGCCTGGATCCAGCCCGAGCAGAAGGG...TTTTTGAACAAGAATATATCCATCCTGCCTAACCCTGAGTTTTTGGAGCACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp AGACCCATCATCACAGGCTATGTCACTAAAACTGACCGAAGCGTTTTCCAGTTCTCCTCATGTAGTCCCTaGATGCCCGGGCTGTACGCG +
Preference number: 4 (lower is better)
Translates to: RPIITGYVTKTDRSVFQFSSCSP*MPGLYA
Trigger: CGCGTACAGCCCGGGCATCCAGGGACTACATGAGGA...GAACTGGAAAACGCTTCGGTCAGTTTTAGTGACATAGCCTGTGATGATGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp CACTGGGCAGCTGAAGCACTTCTCCTAGATTTGCTCTTAACAGAACGAATGCATGGGACGCTGAGGGAATaGCCGGGGAAGACATGTGGT +
Preference number: 4 (lower is better)
Translates to: HWAAEALLLDLLLTERMHGTLRE*PGKTCG
Trigger: ACCACATGTCTTCCCCGGCCATTCCCTCAGCGTCCC...ATGCATTCGTTCTGTTAAGAGCAAATCTAGGAGAAGTGCTTCAGCTGCCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp ACAAAATGTGAGGGCAGTAAAACAATGACCTCCCAAGCTTATCCGTGGAGGAAAGGGCAGTCTGCCAGGTaGCTCTGGAGCCAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: TKCEGSKTMTSQAYPWRKGQSAR*LWSQAL
Trigger: AAGGGCTTGGCTCCAGAGCCACCTGGCAGACTGCCC...TTTCCTCCACGGATAAGCTTGGGAGGTCATTGTTTTACTGCCCTCACATTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp TTCCTAAAACTGGGTACCACGGTCCGCAATAATAGTCACCAGACCCATCATCACGACCTGCCTCAGCACTaGAGGAAGAATCCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: FLKLGTTVRNNSHQTHHHDLPQH*RKNPGK
Trigger: CTTCCCAGGATTCTTCCTTCAGTGCTGAGGCAGGTC...GTGATGATGGGTCTGGTGACTATTATTGCGGACCGTGGTACCCAGTTTTAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp GTGGTGCTCCAAAAACTCAGGGTTAGGCAGGATGGATATATTCTTGTTCAAAAACATGTAGTCCCTGGATaGCCGGGCTGTACGCGCGGC +
Preference number: 4 (lower is better)
Translates to: VVLQKLRVRQDGYILVQKHVVPG*PGCTRG
Trigger: GCCGCGCGTACAGCCCGGGCATCCAGGGACTACATG...TTTTTGAACAAGAATATATCCATCCTGCCTAACCCTGAGTTTTTGGAGCACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp AGAGATCAATCTAGAACTCCCCACTGCTGCACATGCATCAGATGTCATGGTAATCTTGATGAACTCCGCTaGCCGGACGCCCGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: RDQSRTPHCCTCIRCHGNLDELR*PDARLH
Trigger: ATGGAGACGGGCGTCCGGGCAGCGGAGTTCATCAAG...ATTACCATGACATCTGATGCATGTGCAGCAGTGGGGAGTTCTAGATTGATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp ACTGTGGTGCTCCAAAAACTCAGGGTTAGGCAGGATGGATATATTCTTGTTCAACCTGCTTCACCTGCATaGCGCCATAGGAGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: TVVLQKLRVRQDGYILVQPASPA*RHRSSG
Trigger: GCCGGAGCTCCTATGGCGCCATGCAGGTGAAGCAGG...TTGAACAAGAATATATCCATCCTGCCTAACCCTGAGTTTTTGGAGCACCACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp AGACCCATCATCACAGGCTATGTCACTAAAACTGACCGAAGCGTTTTCCAGTTCGGCCATGAGAGGAGCTaGCGCTTGCAGACTGAACTG +
Preference number: 4 (lower is better)
Translates to: RPIITGYVTKTDRSVFQFGHERS*RLQTEL
Trigger: CAGTTCAGTCTGCAAGCGCCAGCTCCTCTCATGGCC...GAACTGGAAAACGCTTCGGTCAGTTTTAGTGACATAGCCTGTGATGATGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp ATTTTAAAGCTTGTCCTTGCTGGGCGTCGATCACATTCAGAGATCAATCTAGAACGGACAGCAGGTAGTTaGGGCCGTAGGTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: ILKLVLAGRRSHSEINLERTAGS*GRRCWP
Trigger: AGGCCAGCACCTACGGCCTCAACTACCTGCTGTCCG...TTCTAGATTGATCTCTGAATGTGATCGACGCCCAGCAAGGACAAGCTTTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp CGCACTGCCAGACCCGTAGTGGTTTCCTTAATGTGGGTTTACAGTCAATATTGCCCTTGTCAAGGACTTTaGTGGAACACGGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: RTARPVVVSLMWVYSQYCPCQGL*WNTAQP
Trigger: TGGCTGAGCCGTGTTCCATCAAAGTCCTTGACAAGG...GCAATATTGACTGTAAACCCACATTAAGGAAACCACTACGGGTCTGGCAGTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp AGAGATCAATCTAGAACTCCCCACTGCTGCACATGCATCAGATGTCATGGTAATCTGGAAGTGGTGGGCTaGGGTTTGCCACTGGGCATT +
Preference number: 4 (lower is better)
Translates to: RDQSRTPHCCTCIRCHGNLEVVG*GLPLGI
Trigger: AATGCCCAGTGGCAAACCTCAGCCCACCACTTCCAG...ATTACCATGACATCTGATGCATGTGCAGCAGTGGGGAGTTCTAGATTGATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp AGAGATCAATCTAGAACTCCCCACTGCTGCACATGCATCAGATGTCATGGTAATGGAGCCATTATCTGCTaGGGCTCACGGGCAGACTGT +
Preference number: 4 (lower is better)
Translates to: RDQSRTPHCCTCIRCHGNGAIIC*GSRADC
Trigger: ACAGTCTGCCCGTGAGCCTCAGCAGATAATGGCTCC...ATTACCATGACATCTGATGCATGTGCAGCAGTGGGGAGTTCTAGATTGATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp ACAAAATGTGAGGGCAGTAAAACAATGACCTCCCAAGCTTATCCGTGGAGGAAAGCTGACAGCTCCCAATaGCAGAGTGAGCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: TKCEGSKTMTSQAYPWRKADSSQ*QSEPVL
Trigger: CAGGACTGGCTCACTCTGTCATTGGGAGCTGTCAGC...TTTCCTCCACGGATAAGCTTGGGAGGTCATTGTTTTACTGCCCTCACATTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp AGGCCAATTCATTTGCTTCACCATGACGGAAATGGAACATGGTACCTGTGTCTAGAGGTCTCCCAGATCTaGATCCACAGGGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: RPIHLLHHDGNGTWYLCLEVSQI*IHRALA
Trigger: GGCCAATGCCCTGTGGATGCAGATCTGGGAGACCTC...TAGACACAGGTACCATGTTCCATTTCCGTCATGGTGAAGCAAATGAATTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp CACTGGGCAGCTGAAGCACTTCTCCTAGATTTGCTCTTAACAGAACGAATGCATTTCCTGAGCCCGACCTaGCTCAGCACTGAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: HWAAEALLLDLLLTERMHFLSPT*LSTEGR
Trigger: TCTTCCTTCAGTGCTGAGGCAGGTCGGGCTCAGGAA...ATGCATTCGTTCTGTTAAGAGCAAATCTAGGAGAAGTGCTTCAGCTGCCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp CAATCTAGAACTCCCCACTGCTGCACATGCATCAGATGTCATGGTAATAAGTATCCACGGGACACGCACTaGCAGACCCGTAGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: QSRTPHCCTCIRCHGNKYPRDTH*QTRSGF
Trigger: GAAACCACTACGGGTCTGGCAGTGCGTGTCCCGTGG...ATACTTATTACCATGACATCTGATGCATGTGCAGCAGTGGGGAGTTCTAGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp CTCAACGGAATCAACAGAATTCCTTTCTCCACATTCCTAAAACTGGGTACCACGACAGGAGCTGGGGGCTaGACAGCGACAAAGTCAAGC +
Preference number: 4 (lower is better)
Translates to: LNGINRIPFSTFLKLGTTTGAGG*TATKSS
Trigger: GCTTGACTTTGTCGCTGTCCAGCCCCCAGCTCCTGT...CGTGGTACCCAGTTTTAGGAATGTGGAGAAAGGAATTCTGTTGATTCCGTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp CTCAACGGAATCAACAGAATTCCTTTCTCCACATTCCTAAAACTGGGTACCACGCCTGAAGACAGGAGCTaGGGGCTGGACAGCGACAAA +
Preference number: 4 (lower is better)
Translates to: LNGINRIPFSTFLKLGTTPEDRS*GLDSDK
Trigger: TTTGTCGCTGTCCAGCCCCCAGCTCCTGTCTTCAGG...CGTGGTACCCAGTTTTAGGAATGTGGAGAAAGGAATTCTGTTGATTCCGTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp AGACCCATCATCACAGGCTATGTCACTAAAACTGACCGAAGCGTTTTCCAGTTCGTGTTCTGGAAGTGGTaGGCTGAGGTTTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: RPIITGYVTKTDRSVFQFVFWKW*AEVCHW
Trigger: CCAGTGGCAAACCTCAGCCCACCACTTCCAGAACAC...GAACTGGAAAACGCTTCGGTCAGTTTTAGTGACATAGCCTGTGATGATGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp GCACAACGAGCTGTTCTTGAAGATGGACGCGACCACCACACGAAGAAACATGCAGATTGTTGGTTGTCATaGTCAGTGTTCTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: AQRAVLEDGRDHHTKKHADCWLS*SVFWKW
Trigger: CCACTTCCAGAACACTGATCATGACAACCAACAATC...TGCATGTTTCTTCGTGTGGTGGTCGCGTCCATCTTCAAGAACAGCTCGTTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp ATTTTAAAGCTTGTCCTTGCTGGGCGTCGATCACATTCAGAGATCAATCTAGAAAAGAAACATGCAGAGTaGTCAGCGGCGGGCGTGCCG +
Preference number: 4 (lower is better)
Translates to: ILKLVLAGRRSHSEINLEKKHAE*SAAGVP
Trigger: CGGCACGCCCGCCGCTGATCACTCTGCATGTTTCTT...TTCTAGATTGATCTCTGAATGTGATCGACGCCCAGCAAGGACAAGCTTTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp ACAAAATGTGAGGGCAGTAAAACAATGACCTCCCAAGCTTATCCGTGGAGGAAATGCTTCCGCAGGGCTTaGTCCAGCAGCTGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: TKCEGSKTMTSQAYPWRKCFRRA*SSSCKG
Trigger: TCCTTTACAGCTGCTGGAGCAAGCCCTGCGGAAGCA...TTTCCTCCACGGATAAGCTTGGGAGGTCATTGTTTTACTGCCCTCACATTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp AGACCCATCATCACAGGCTATGTCACTAAAACTGACCGAAGCGTTTTCCAGTTCGCGTCTGCTCCCCATTaGATGTGGCTATTCGCTCTT +
Preference number: 4 (lower is better)
Translates to: RPIITGYVTKTDRSVFQFASAPH*MWLFAL
Trigger: AAGAGCGAATAGCCACATGCAATGGGGAGCAGACGC...GAACTGGAAAACGCTTCGGTCAGTTTTAGTGACATAGCCTGTGATGATGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp CTCAACGGAATCAACAGAATTCCTTTCTCCACATTCCTAAAACTGGGTACCACGTCTCGGTTCTGCGTCTaGTCCCCATTGCATGTGGCT +
Preference number: 4 (lower is better)
Translates to: LNGINRIPFSTFLKLGTTSRFCV*SPLHVA
Trigger: AGCCACATGCAATGGGGAGCAGACGCAGAACCGAGA...CGTGGTACCCAGTTTTAGGAATGTGGAGAAAGGAATTCTGTTGATTCCGTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp AACAGAATTCCTTTCTCCACATTCCTAAAACTGGGTACCACGGTCCGCAATAATTCCTCCTCCAGCCGGTaGGGTTATACTGGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: NRIPFSTFLKLGTTVRNNSSSSR*GYTGGV
Trigger: GACACCACCAGTATAACCGCACCGGCTGGAGGAGGA...ATTATTGCGGACCGTGGTACCCAGTTTTAGGAATGTGGAGAAAGGAATTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp AACAGAATTCCTTTCTCCACATTCCTAAAACTGGGTACCACGGTCCGCAATAATACCTTCAGGGCGACCTaGCTCCTTCACTCACTTCCG +
Preference number: 4 (lower is better)
Translates to: NRIPFSTFLKLGTTVRNNTFRAT*LLHSLP
Trigger: CGGAAGTGAGTGAAGGAGCCAGGTCGCCCTGAAGGT...ATTATTGCGGACCGTGGTACCCAGTTTTAGGAATGTGGAGAAAGGAATTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR CAA 72 bp GGTAACAAAGACAGTGGTTGTTGTGGCAGAATACACTaGCATAGTATACCTGTATGCTTCCGACGTCGGGCG +
Preference number: 4 (lower is better)
Translates to: GNKDSGCCGRIH*HSIPVCFRRRA
Trigger: CGCCCGACGTCGGAAGCATACAGGTATACTATGCAAGTGTATTCTGCCACAACAACCACTGTCTTTGTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp TTCCTAAAACTGGGTACCACGGTCCGCAATAATAGTCACCAGACCCATCATCACAGGGCAGTAAAACAATaGCCTCCCAAGCTTATCCGT +
Preference number: 4 (lower is better)
Translates to: FLKLGTTVRNNSHQTHHHRAVKQ*PPKLIR
Trigger: ACGGATAAGCTTGGGAGGTCATTGTTTTACTGCCCT...GTGATGATGGGTCTGGTGACTATTATTGCGGACCGTGGTACCCAGTTTTAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp ACTGTGGTGCTCCAAAAACTCAGGGTTAGGCAGGATGGATATATTCTTGTTCAACCACACGAAGAAACATaGAGAGTGATCAGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: TVVLQKLRVRQDGYILVQPHEET*RVISGG
Trigger: CCCGCCGCTGATCACTCTGCATGTTTCTTCGTGTGG...TTGAACAAGAATATATCCATCCTGCCTAACCCTGAGTTTTTGGAGCACCACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp AGAGATCAATCTAGAACTCCCCACTGCTGCACATGCATCAGATGTCATGGTAATCATAGTATACCTGTATaGTTCCGACGTCGGGCGCCA +
Preference number: 4 (lower is better)
Translates to: RDQSRTPHCCTCIRCHGNHSIPV*FRRRAP
Trigger: TGGCGCCCGACGTCGGAAGCATACAGGTATACTATG...ATTACCATGACATCTGATGCATGTGCAGCAGTGGGGAGTTCTAGATTGATCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp CAATCTAGAACTCCCCACTGCTGCACATGCATCAGATGTCATGGTAATAAGTATTCTGCCAGGTGGCTCTaGAGCCAAGCCCTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: QSRTPHCCTCIRCHGNKYSARWL*SQALWK
Trigger: TTTCCAAAGGGCTTGGCTCCAGAGCCACCTGGCAGA...ATACTTATTACCATGACATCTGATGCATGTGCAGCAGTGGGGAGTTCTAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp TTCCTAAAACTGGGTACCACGGTCCGCAATAATAGTCACCAGACCCATCATCACCAGTCTCCTGATCTGTaGGCTTTATTATTGGTACCG +
Preference number: 4 (lower is better)
Translates to: FLKLGTTVRNNSHQTHHHQSPDL*ALLLVP
Trigger: CGGTACCAATAATAAAGCTCACAGATCAGGAGACTG...GTGATGATGGGTCTGGTGACTATTATTGCGGACCGTGGTACCCAGTTTTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp GCACAACGAGCTGTTCTTGAAGATGGACGCGACCACCACACGAAGAAACATGCAATAGTAAACCTGGTCTaGTTGTTGGTTGTCATGATC +
Preference number: 4 (lower is better)
Translates to: AQRAVLEDGRDHHTKKHAIVNLV*LLVVMI
Trigger: GATCATGACAACCAACAATCAGACCAGGTTTACTAT...TGCATGTTTCTTCGTGTGGTGGTCGCGTCCATCTTCAAGAACAGCTCGTTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp ACAAAATGTGAGGGCAGTAAAACAATGACCTCCCAAGCTTATCCGTGGAGGAAACTCCCAATGACAGAGTaGGCCAGTCCTGCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: TKCEGSKTMTSQAYPWRKLPMTE*ASPASK
Trigger: TTTTGAAGCAGGACTGGCTCACTCTGTCATTGGGAG...TTTCCTCCACGGATAAGCTTGGGAGGTCATTGTTTTACTGCCCTCACATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp AACAGAATTCCTTTCTCCACATTCCTAAAACTGGGTACCACGGTCCGCAATAATAAACACTGGGCGTTGTaGAGGGCGGTGTGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: NRIPFSTFLKLGTTVRNNKHWAL*RAVCLN
Trigger: ATTCAGACACACCGCCCTGCACAACGCCCAGTGTTT...ATTATTGCGGACCGTGGTACCCAGTTTTAGGAATGTGGAGAAAGGAATTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp CGCACTGCCAGACCCGTAGTGGTTTCCTTAATGTGGGTTTACAGTCAATATTGCTTTAAAGCTTGTCCTTaGTGGGCGTCGATCACATTC +
Preference number: 4 (lower is better)
Translates to: RTARPVVVSLMWVYSQYCFKACP*WASITF
Trigger: GAATGTGATCGACGCCCAGCAAGGACAAGCTTTAAA...GCAATATTGACTGTAAACCCACATTAAGGAAACCACTACGGGTCTGGCAGTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp TTCCTAAAACTGGGTACCACGGTCCGCAATAATAGTCACCAGACCCATCATCACACTGCAGACACAGTGTaGTACTCTATTCTGGAATGC +
Preference number: 4 (lower is better)
Translates to: FLKLGTTVRNNSHQTHHHTADTV*YSILEC
Trigger: GCATTCCAGAATAGAGTAGCACACTGTGTCTGCAGT...GTGATGATGGGTCTGGTGACTATTATTGCGGACCGTGGTACCCAGTTTTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp AACAGAATTCCTTTCTCCACATTCCTAAAACTGGGTACCACGGTCCGCAATAATTGTTTGGATAGGACCTaGCCAGCGGTGACACAGCAT +
Preference number: 4 (lower is better)
Translates to: NRIPFSTFLKLGTTVRNNCLDRT*PAVTQH
Trigger: ATGCTGTGTCACCGCTGGCCAGGTCCTATCCAAACA...ATTATTGCGGACCGTGGTACCCAGTTTTAGGAATGTGGAGAAAGGAATTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp AGAGATCAATCTAGAACTCCCCACTGCTGCACATGCATCAGATGTCATGGTAATCGTGAGAGCCCTTCATaGACAGTTTCATGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: RDQSRTPHCCTCIRCHGNRESPS*TVSCRC
Trigger: ACAACGGCATGAAACTGTCCATGAAGGGCTCTCACG...ATTACCATGACATCTGATGCATGTGCAGCAGTGGGGAGTTCTAGATTGATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp ATTTTAAAGCTTGTCCTTGCTGGGCGTCGATCACATTCAGAGATCAATCTAGAAGTGCGGTTATACTGGTaGTGTCCCCTGTTGCCCACA +
Preference number: 4 (lower is better)
Translates to: ILKLVLAGRRSHSEINLEVRLYW*CPLLPT
Trigger: TGTGGGCAACAGGGGACACCACCAGTATAACCGCAC...TTCTAGATTGATCTCTGAATGTGATCGACGCCCAGCAAGGACAAGCTTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp ACAAAATGTGAGGGCAGTAAAACAATGACCTCCCAAGCTTATCCGTGGAGGAAATCCCAAGCTTATCCGTaGAGGAAAGACACACGAACG +
Preference number: 4 (lower is better)
Translates to: TKCEGSKTMTSQAYPWRKSQAYP*RKDTRT
Trigger: CGTTCGTGTGTCTTTCCTCCACGGATAAGCTTGGGA...TTTCCTCCACGGATAAGCTTGGGAGGTCATTGTTTTACTGCCCTCACATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp GTGGTGCTCCAAAAACTCAGGGTTAGGCAGGATGGATATATTCTTGTTCAAAAATGGAGCCAAGCCCTTTaGAAAACCTTCAGGGCGACC +
Preference number: 4 (lower is better)
Translates to: VVLQKLRVRQDGYILVQKWSQAL*KTFRAT
Trigger: GGTCGCCCTGAAGGTTTTCCAAAGGGCTTGGCTCCA...TTTTTGAACAAGAATATATCCATCCTGCCTAACCCTGAGTTTTTGGAGCACCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp TTCCTAAAACTGGGTACCACGGTCCGCAATAATAGTCACCAGACCCATCATCACAACATTAAAACTCTGTaGTCAGAGCAGGACAACGGC +
Preference number: 4 (lower is better)
Translates to: FLKLGTTVRNNSHQTHHHNIKTL*SEQDNG
Trigger: GCCGTTGTCCTGCTCTGACCACAGAGTTTTAATGTT...GTGATGATGGGTCTGGTGACTATTATTGCGGACCGTGGTACCCAGTTTTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp GTGGTGCTCCAAAAACTCAGGGTTAGGCAGGATGGATATATTCTTGTTCAAAAATGCCCCACTTCTCTTTaGTCCACCTCCGGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: VVLQKLRVRQDGYILVQKCPTSL*STSGSQ
Trigger: TTGACTACCGGAGGTGGATCAAAGAGAAGTGGGGCA...TTTTTGAACAAGAATATATCCATCCTGCCTAACCCTGAGTTTTTGGAGCACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp AATCAACAGAATTCCTTTCTCCACATTCCTAAAACTGGGTACCACGGTCCGCAACTCTCTTCTCATAGCTaGTTCTTCAGGACAAGGGGA +
Preference number: 4 (lower is better)
Translates to: NQQNSFLHIPKTGYHGPQLSSHS*FFRTRG
Trigger: TCCCCTTGTCCTGAAGAAGCAGCTATGAGAAGAGAG...TTGCGGACCGTGGTACCCAGTTTTAGGAATGTGGAGAAAGGAATTCTGTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp TTCCTAAAACTGGGTACCACGGTCCGCAATAATAGTCACCAGACCCATCATCACTCATTCAGGTCCCTCTaGAGAAGGAACTGTTTCAAT +
Preference number: 4 (lower is better)
Translates to: FLKLGTTVRNNSHQTHHHSFRSL*RRNCFN
Trigger: ATTGAAACAGTTCCTTCTGCAGAGGGACCTGAATGA...GTGATGATGGGTCTGGTGACTATTATTGCGGACCGTGGTACCCAGTTTTAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp AATCAACAGAATTCCTTTCTCCACATTCCTAAAACTGGGTACCACGGTCCGCAAGGGTTTGATCTCCTCTaGTGCTTTGACGAACAGGAA +
Preference number: 4 (lower is better)
Translates to: NQQNSFLHIPKTGYHGPQGFDLL*CFDEQE
Trigger: TTCCTGTTCGTCAAAGCAGCAGAGGAGATCAAACCC...TTGCGGACCGTGGTACCCAGTTTTAGGAATGTGGAGAAAGGAATTCTGTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp ACAAAATGTGAGGGCAGTAAAACAATGACCTCCCAAGCTTATCCGTGGAGGAAACCAGGACAACTGTGGTaGTCCAAAAACTCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: TKCEGSKTMTSQAYPWRKPGQLW*SKNSGL
Trigger: TAACCCTGAGTTTTTGGAGCACCACAGTTGTCCTGG...TTTCCTCCACGGATAAGCTTGGGAGGTCATTGTTTTACTGCCCTCACATTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp AGAGATCAATCTAGAACTCCCCACTGCTGCACATGCATCAGATGTCATGGTAATAGATGGCCTACAAGATaGAACCAACTCCCAGGACAA +
Preference number: 4 (lower is better)
Translates to: RDQSRTPHCCTCIRCHGNRWPTR*NQLPGQ
Trigger: TTGTCCTGGGAGTTGGTTGCATCTTGTAGGCCATCT...ATTACCATGACATCTGATGCATGTGCAGCAGTGGGGAGTTCTAGATTGATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp CAATCTAGAACTCCCCACTGCTGCACATGCATCAGATGTCATGGTAATAAGTATGTGACACAGCATGGCTaGGCACTATGTAGGCATAAT +
Preference number: 4 (lower is better)
Translates to: QSRTPHCCTCIRCHGNKYVTQHG*ALCRHN
Trigger: ATTATGCCTACATAGTGCTCAGCCATGCTGTGTCAC...ATACTTATTACCATGACATCTGATGCATGTGCAGCAGTGGGGAGTTCTAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp ACTGTGGTGCTCCAAAAACTCAGGGTTAGGCAGGATGGATATATTCTTGTTCAAAACCAGCCGACACGATaGCCCAACTTAGAAAATGCA +
Preference number: 4 (lower is better)
Translates to: TVVLQKLRVRQDGYILVQNQPTR*PNLENA
Trigger: TGCATTTTCTAAGTTGGGTCATCGTGTCGGCTGGTT...TTGAACAAGAATATATCCATCCTGCCTAACCCTGAGTTTTTGGAGCACCACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp AATCAACAGAATTCCTTTCTCCACATTCCTAAAACTGGGTACCACGGTCCGCAATACTCTATTCTGGAATaGCTCCTAGAGAACCTGCAG +
Preference number: 4 (lower is better)
Translates to: NQQNSFLHIPKTGYHGPQYSILE*LLENLQ
Trigger: CTGCAGGTTCTCTAGGAGGCATTCCAGAATAGAGTA...TTGCGGACCGTGGTACCCAGTTTTAGGAATGTGGAGAAAGGAATTCTGTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp AATCAACAGAATTCCTTTCTCCACATTCCTAAAACTGGGTACCACGGTCCGCAACCAGGCCAATTCATTTaGTTCACCATGACGGAAATG +
Preference number: 4 (lower is better)
Translates to: NQQNSFLHIPKTGYHGPQPGQFI*FTMTEM
Trigger: CATTTCCGTCATGGTGAAGCAAATGAATTGGCCTGG...TTGCGGACCGTGGTACCCAGTTTTAGGAATGTGGAGAAAGGAATTCTGTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp ACTGTGGTGCTCCAAAAACTCAGGGTTAGGCAGGATGGATATATTCTTGTTCAAAAAGCTTGTCCTTGCTaGGCGTCGATCACATTCAGA +
Preference number: 4 (lower is better)
Translates to: TVVLQKLRVRQDGYILVQKACPC*ASITFR
Trigger: TCTGAATGTGATCGACGCCCAGCAAGGACAAGCTTT...TTGAACAAGAATATATCCATCCTGCCTAACCCTGAGTTTTTGGAGCACCACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp CTCAACGGAATCAACAGAATTCCTTTCTCCACATTCCTAAAACTGGGTACCACGTCTCCTCTGCTGCTTTaGCGAACAGGAAATGAAAAT +
Preference number: 4 (lower is better)
Translates to: LNGINRIPFSTFLKLGTTSPLLL*RTGNEN
Trigger: ATTTTCATTTCCTGTTCGTCAAAGCAGCAGAGGAGA...CGTGGTACCCAGTTTTAGGAATGTGGAGAAAGGAATTCTGTTGATTCCGTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp AATCAACAGAATTCCTTTCTCCACATTCCTAAAACTGGGTACCACGGTCCGCAATCATGGACAGTTTCATaGCGTTGTGCTGCTTATGAT +
Preference number: 4 (lower is better)
Translates to: NQQNSFLHIPKTGYHGPQSWTVS*RCAAYD
Trigger: ATCATAAGCAGCACAACGGCATGAAACTGTCCATGA...TTGCGGACCGTGGTACCCAGTTTTAGGAATGTGGAGAAAGGAATTCTGTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp AGACCCATCATCACAGGCTATGTCACTAAAACTGACCGAAGCGTTTTCCAGTTCTGTGAGCTTTATTATTaGTACCGTAGCCTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: RPIITGYVTKTDRSVFQFCELYY*YRSLVK
Trigger: CTTGACAAGGCTACGGTACCAATAATAAAGCTCACA...GAACTGGAAAACGCTTCGGTCAGTTTTAGTGACATAGCCTGTGATGATGGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp CACTGGGCAGCTGAAGCACTTCTCCTAGATTTGCTCTTAACAGAACGAATGCATCAGGACAAGGGGACATaGAGTTATAAAAGTCAATTA +
Preference number: 4 (lower is better)
Translates to: HWAAEALLLDLLLTERMHQDKGT*SYKSQL
Trigger: TAATTGACTTTTATAACTTCATGTCCCCTTGTCCTG...ATGCATTCGTTCTGTTAAGAGCAAATCTAGGAGAAGTGCTTCAGCTGCCCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp ATTTTAAAGCTTGTCCTTGCTGGGCGTCGATCACATTCAGAGATCAATCTAGAATGGTCATGGCTTTCATaGTCTCCTCTTTGGCGATAT +
Preference number: 4 (lower is better)
Translates to: ILKLVLAGRRSHSEINLEWSWLS*SPLWRY
Trigger: ATATCGCCAAAGAGGAGATCATGAAAGCCATGACCA...TTCTAGATTGATCTCTGAATGTGATCGACGCCCAGCAAGGACAAGCTTTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp ACTGTGGTGCTCCAAAAACTCAGGGTTAGGCAGGATGGATATATTCTTGTTCAATTTGATCTCCTCTGCTaGTTTGACGAACAGGAAATG +
Preference number: 4 (lower is better)
Translates to: TVVLQKLRVRQDGYILVQFDLLC*FDEQEM
Trigger: CATTTCCTGTTCGTCAAAGCAGCAGAGGAGATCAAA...TTGAACAAGAATATATCCATCCTGCCTAACCCTGAGTTTTTGGAGCACCACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp AGAGATCAATCTAGAACTCCCCACTGCTGCACATGCATCAGATGTCATGGTAATTTCTGGCACTTGAAATaGTGGATTTGTTGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: RDQSRTPHCCTCIRCHGNFWHLK*WICCPV
Trigger: AACTGGACAACAAATCCAGCATTTCAAGTGCCAGAA...ATTACCATGACATCTGATGCATGTGCAGCAGTGGGGAGTTCTAGATTGATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp GCAGACATTTTAAAGCTTGTCCTTGCTGGGCGTCGATCACATTCAGAGATCAATGCATCAATTCTTGGATaGAACTGTAGAAAGCTAATG +
Preference number: 4 (lower is better)
Translates to: ADILKLVLAGRRSHSEINASILG*NCRKLM
Trigger: CATTAGCTTTCTACAGTTGCATCCAAGAATTGATGC...ATTGATCTCTGAATGTGATCGACGCCCAGCAAGGACAAGCTTTAAAATGTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CCA 90 bp ACTGTGGTGCTCCAAAAACTCAGGGTTAGGCAGGATGGATATATTCTTGTTCAAGTCTATGTCGCTAGTTaGAAGATAAAGACCTGTACT +
Preference number: 4 (lower is better)
Translates to: TVVLQKLRVRQDGYILVQVYVAS*KIKTCT
Trigger: AGTACAGGTCTTTATCTTCCAACTAGCGACATAGAC...TTGAACAAGAATATATCCATCCTGCCTAACCCTGAGTTTTTGGAGCACCACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp ATTTTAAAGCTTGTCCTTGCTGGGCGTCGATCACATTCAGAGATCAATCTAGAAATAAGTATCTTGTCTTaGCATTCTCCACTAGTGGAC +
Preference number: 4 (lower is better)
Translates to: ILKLVLAGRRSHSEINLEISILS*HSPLVD
Trigger: GTCCACTAGTGGAGAATGTCAAGACAAGATACTTAT...TTCTAGATTGATCTCTGAATGTGATCGACGCCCAGCAAGGACAAGCTTTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR GCA 90 bp GTGGTGCTCCAAAAACTCAGGGTTAGGCAGGATGGATATATTCTTGTTCAAAAAGTGGCAGAATACACTTaGATAGTATACCTGTATGCT +
Preference number: 4 (lower is better)
Translates to: VVLQKLRVRQDGYILVQKVAEYT*IVYLYA
Trigger: AGCATACAGGTATACTATGCAAGTGTATTCTGCCAC...TTTTTGAACAAGAATATATCCATCCTGCCTAACCCTGAGTTTTTGGAGCACCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000230859.8
3UTR CAA 72 bp ACATGCATCAGATGTCATGGTAATAAGTATCTTGTCTaGACATTCTCCACTAGTGGACTTCAAAGACCAACC +
Preference number: 4 (lower is better)
Translates to: TCIRCHGNKYLV*TFSTSGLQRPT
Trigger: GGTTGGTCTTTGAAGTCCACTAGTGGAGAATGTCAAGACAAGATACTTATTACCATGACATCTGATGCATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR TCA 90 bp GTGGTGCTCCAAAAACTCAGGGTTAGGCAGGATGGATATATTCTTGTTCAAAAATTCACTTCAGTCTCCTaGTCTGTGAGCTTTATTATT +
Preference number: 4 (lower is better)
Translates to: VVLQKLRVRQDGYILVQKFTSVS*SVSFII
Trigger: AATAATAAAGCTCACAGATCAGGAGACTGAAGTGAA...TTTTTGAACAAGAATATATCCATCCTGCCTAACCCTGAGTTTTTGGAGCACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS GCA 90 bp AGAAGGCGCCGCCGCGGCCGCCGCCCGGCCGGCCCAGCGAGGCGCTaGTGGAGGACGACGACGAGCAGCCGGGGCTCTCGGTGCCCGACT +
Preference number: 5 (lower is better)
Translates to: RRRRRGRRPAGPARR*WRTTTSSRGSRCPT
Trigger: AGTCGGGCACCGAGAGCCCCGGCTGCTCGTCGTCGTCCTCCAGCAGCGCCTCGCTGGGCCGGCCGGGCGGCGGCCGCGGCGGCGCCTTCT
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS CCA 90 bp GGCGCCGCCGCCCGTGCGGCTAGCCCTCAGTCACGCTCGCGCCGCTaGCTCGGCGCTCCTGCGGCGGCGGCGGCGGCGGCGGTGAAAAGA +
Preference number: 5 (lower is better)
Translates to: GAAARAASPQSRSRR*LGAPAAAAAAAVKR
Trigger: TCTTTTCACCGCCGCCGCCGCCGCCGCCGCAGGAGCGCCGAGCCAGCGGCGCGAGCGTGACTGAGGGCTAGCCGCACGGGCGGCGGCGCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS CCA 90 bp AGGACGACGACGAGCAGCCGGGGCTCTCGGTGCCCGACTCCGCGTTaGACGAGGAGGACGACGACGAGGACGACAGCGACGGCGACTTGT +
Preference number: 5 (lower is better)
Translates to: RTTTSSRGSRCPTPR*TRRTTTRTTATATC
Trigger: ACAAGTCGCCGTCGCTGTCGTCCTCGTCGTCGTCCTCCTCGTCCAACGCGGAGTCGGGCACCGAGAGCCCCGGCTGCTCGTCGTCGTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS CCA 90 bp CTTGGCCTTAGCCTTCAACATCCATCCTCCAAAAGCCCGGGCGCCTaGGACGGGTGTCTGCACCGCGGGCGCCGGCCAGGACCATGGGCC +
Preference number: 5 (lower is better)
Translates to: LGLSLQHPSSKSPGA*DGCLHRGRRPGPWA
Trigger: GGCCCATGGTCCTGGCCGGCGCCCGCGGTGCAGACACCCGTCCCAGGCGCCCGGGCTTTTGGAGGATGGATGTTGAAGGCTAAGGCCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515721.1
CDS-3UTR CAA 90 bp TGCTTCCGACGTCGGGCGCCAGCGGTCCCGGCCCCAACGCTGGGCTGTGCTCTCATTGGTACCGTAGCCTaGTCAAGGACTTTGATGGAA +
Preference number: 5 (lower is better)
Translates to: CFRRRAPAVPAPTLGCALIGTVA*SRTLME
Trigger: TTCCATCAAAGTCCTTGACAAGGCTACGGTACCAAT...GAGAGCACAGCCCAGCGTTGGGGCCGGGACCGCTGGCGCCCGACGTCGGAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS CCA 90 bp TGCCGTTGTGCTGCTTATGATACAGATGAGGGCTCGAGAGCGGGTTaGGGGACGCTGAGGGAATGGCCGGGGAAGACATGTGGTGGACGG +
Preference number: 5 (lower is better)
Translates to: CRCAAYDTDEGSRAG*GTLREWPGKTCGGR
Trigger: CCGTCCACCACATGTCTTCCCCGGCCATTCCCTCAGCGTCCCCCAACCCGCTCTCGAGCCCTCATCTGTATCATAAGCAGCACAACGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230859.8
ENST00000514697.1
ENST00000631941.2
CDS CCA 90 bp GATACAGATGAGGGCTCGAGAGCGGGTTGGGGGACGCTGAGGGAATaGCCGGGGAAGACATGTGGTGGACGGCTTTCAAAGACGCAGTTC +
Preference number: 5 (lower is better)
Translates to: DTDEGSRAGWGTLRE*PGKTCGGRLSKTQF
Trigger: GAACTGCGTCTTTGAAAGCCGTCCACCACATGTCTTCCCCGGCCATTCCCTCAGCGTCCCCCAACCCGCTCTCGAGCCCTCATCTGTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230859.8
ENST00000514697.1
ENST00000631941.2
CDS TCA 90 bp AGGATTACTGCCCTCGACAGCCGCATGAGTCGCACAGACAGGTTCTaGAGGTTCACGGCAGGGGAAAGGAAGCCTGGTGCCCACATCACG +
Preference number: 5 (lower is better)
Translates to: RITALDSRMSRTDRF*RFTAGERKPGAHIT
Trigger: CGTGATGTGGGCACCAGGCTTCCTTTCCCCTGCCGTGAACCTTCAGAACCTGTCTGTGCGACTCATGCGGCTGTCGAGGGCAGTAATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505457.1
CDS TCA 90 bp CGCGACGAAGTCTGCTGTCCAGCAGCCTCTTCAAGGCAATACCAGTaGGTGGCACTCGCTCACTCACCAGCACCACGAGGAAGCCTGAAC +
Preference number: 5 (lower is better)
Translates to: RDEVCCPAASSRQYQ*VALAHSPAPRGSLN
Trigger: GTTCAGGCTTCCTCGTGGTGCTGGTGAGTGAGCGAGTGCCACTCACTGGTATTGCCTTGAAGAGGCTGCTGGACAGCAGACTTCGTCGCG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511764.5
ENST00000514697.1
CDS CCA 90 bp AGCGGGTTGGGGGACGCTGAGGGAATGGCCGGGGAAGACATGTGGTaGACGGCTTTCAAAGACGCAGTTCCTTCTACACCAGCTTGTCTG +
Preference number: 5 (lower is better)
Translates to: SGLGDAEGMAGEDMW*TAFKDAVPSTPACL
Trigger: CAGACAAGCTGGTGTAGAAGGAACTGCGTCTTTGAAAGCCGTCCACCACATGTCTTCCCCGGCCATTCCCTCAGCGTCCCCCAACCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230859.8
ENST00000514697.1
ENST00000631941.2
CDS CCA 90 bp GAGAGCGGGTTGGGGGACGCTGAGGGAATGGCCGGGGAAGACATGTaGTGGACGGCTTTCAAAGACGCAGTTCCTTCTACACCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: ESGLGDAEGMAGEDM*WTAFKDAVPSTPAC
Trigger: ACAAGCTGGTGTAGAAGGAACTGCGTCTTTGAAAGCCGTCCACCACATGTCTTCCCCGGCCATTCCCTCAGCGTCCCCCAACCCGCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230859.8
ENST00000514697.1
ENST00000631941.2
CDS TCA 90 bp GCGGGAAGGGTGCCAGAGGGCCACGTACCTGATTGTTGGTTGTCATaGTCAGTGTTCTGGAAGTGGTGGGCTGAGGTTTGCCACTGGGCA +
Preference number: 5 (lower is better)
Translates to: AGRVPEGHVPDCWLS*SVFWKWWAEVCHWA
Trigger: TGCCCAGTGGCAAACCTCAGCCCACCACTTCCAGAACACTGATCATGACAACCAACAATCAGGTACGTGGCCCTCTGGCACCCTTCCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514410.1
CDS GCA 90 bp ACTTTGATGGAACACGGCTCAGCCACGTTGTGCTTCCGCAGGGCTTaGTCCAGCAGCTGTAAAGGAGGACGCTCCCATTTCCCGAAGACC +
Preference number: 5 (lower is better)
Translates to: TLMEHGSATLCFRRA*SSSCKGGRSHFPKT
Trigger: GGTCTTCGGGAAATGGGAGCGTCCTCCTTTACAGCTGCTGGAGCAAGCCCTGCGGAAGCACAACGTGGCTGAGCCGTGTTCCATCAAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230859.8
ENST00000631941.2
CDS GCA 90 bp GTAGCCTTGTCAAGGACTTTGATGGAACACGGCTCAGCCACGTTGTaGTTCCGCAGGGCTTGCTCCAGCAGCTGTAAAGGAGGACGCTCC +
Preference number: 5 (lower is better)
Translates to: VALSRTLMEHGSATL*FRRACSSSCKGGRS
Trigger: GGAGCGTCCTCCTTTACAGCTGCTGGAGCAAGCCCTGCGGAAGCACAACGTGGCTGAGCCGTGTTCCATCAAAGTCCTTGACAAGGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230859.8
ENST00000631941.2
CDS GCA 90 bp TATCACAGCTCGGATGCTGTTCCCAGGGGCCACCAGCGGGAAGGGTaGCAGAGGGCCACGTACCTGATTGTTGGTTGTCATGATCAGTGT +
Preference number: 5 (lower is better)
Translates to: YHSSDAVPRGHQREG*QRATYLIVGCHDQC
Trigger: ACACTGATCATGACAACCAACAATCAGGTACGTGGCCCTCTGGCACCCTTCCCGCTGGTGGCCCCTGGGAACAGCATCCGAGCTGTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514410.1
CDS CCA 90 bp CAGAGCTGTAGCCGCCGCCTTGGGTGTGGCCGTGAGAGCCCTTCATaGACAGTTTCATGCCGTTGTGCTGCTTATGATACAGATGAGGGC +
Preference number: 5 (lower is better)
Translates to: QSCSRRLGCGRESPS*TVSCRCAAYDTDEG
Trigger: GCCCTCATCTGTATCATAAGCAGCACAACGGCATGAAACTGTCCATGAAGGGCTCTCACGGCCACACCCAAGGCGGCGGCTACAGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230859.8
ENST00000514697.1
ENST00000631941.2
CDS-3UTR CAA 90 bp CTGCGACACGATCCGTTAAAACACTCCCCACGGCGCACTGGGCAGCTGAAGCACTCCTTCTACACCAGCTaGTCTGCAAGGAACAGGAGC +
Preference number: 5 (lower is better)
Translates to: LRHDPLKHSPRRTGQLKHSFYTS*SARNRS
Trigger: GCTCCTGTTCCTTGCAGACAAGCTGGTGTAGAAGGA...GTGCTTCAGCTGCCCAGTGCGCCGTGGGGAGTGTTTTAACGGATCGTGTCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CAA 90 bp CACTGGGCAGCTGAAGCACTTCTCCTAGATTTGCTCTTAACAGAACGAATGCATGGGCTCGAGAGCGGGTaGGGGGACGCTGAGGGAATG +
Preference number: 5 (lower is better)
Translates to: HWAAEALLLDLLLTERMHGLESG*GDAEGM
Trigger: CATTCCCTCAGCGTCCCCCAACCCGCTCTCGAGCCC...ATGCATTCGTTCTGTTAAGAGCAAATCTAGGAGAAGTGCTTCAGCTGCCCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS TCA 90 bp ACCAGTGAGTGGCACTCGCTCACTCACCAGCACCACGAGGAAGCCTaGACAGCAGCCTCTTCAACGAGGAGTGTTCAAAAGGAACACAAC +
Preference number: 5 (lower is better)
Translates to: TSEWHSLTHQHHEEA*TAASSTRSVQKEHN
Trigger: GTTGTGTTCCTTTTGAACACTCCTCGTTGAAGAGGCTGCTGTTCAGGCTTCCTCGTGGTGCTGGTGAGTGAGCGAGTGCCACTCACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511764.5
ENST00000514697.1
CDS-3UTR CAA 90 bp GTGGTGCTCCAAAAACTCAGGGTTAGGCAGGATGGATATATTCTTGTTCAAAAAGACAGCGACGGCGACTaGTGCAAGCGCCGCGCGCCC +
Preference number: 5 (lower is better)
Translates to: VVLQKLRVRQDGYILVQKDSDGD*CKRRAP
Trigger: GGGCGCGCGGCGCTTGCACAAGTCGCCGTCGCTGTC...TTTTTGAACAAGAATATATCCATCCTGCCTAACCCTGAGTTTTTGGAGCACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CAA 90 bp CTCAACGGAATCAACAGAATTCCTTTCTCCACATTCCTAAAACTGGGTACCACGTGGTGGTGTCCCCTGTaGCCCACAGGGGGCCGCACA +
Preference number: 5 (lower is better)
Translates to: LNGINRIPFSTFLKLGTTWWCPL*PTGGRT
Trigger: TGTGCGGCCCCCTGTGGGCAACAGGGGACACCACCA...CGTGGTACCCAGTTTTAGGAATGTGGAGAAAGGAATTCTGTTGATTCCGTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CAA 90 bp CTACAGATTCCTCAACGGAATCAACAGAATTCCTTTCTCCACATTCCTAAAACTGCGCCGTCGGCGAAGTaGAAGAAGGCGCCGCCGCGG +
Preference number: 5 (lower is better)
Translates to: LQIPQRNQQNSFLHIPKTAPSAK*KKAPPR
Trigger: CCGCGGCGGCGCCTTCTTCAACTTCGCCGACGGCGC...AGTTTTAGGAATGTGGAGAAAGGAATTCTGTTGATTCCGTTGAGGAATCTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CAA 90 bp ATTTTAAAGCTTGTCCTTGCTGGGCGTCGATCACATTCAGAGATCAATCTAGAAGCTGTAGCCGCCGCCTaGGGTGTGGCCGTGAGAGCC +
Preference number: 5 (lower is better)
Translates to: ILKLVLAGRRSHSEINLEAVAAA*GVAVRA
Trigger: GGCTCTCACGGCCACACCCAAGGCGGCGGCTACAGC...TTCTAGATTGATCTCTGAATGTGATCGACGCCCAGCAAGGACAAGCTTTAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS TCA 90 bp ACTGTAGTTCAACCATTTAGAGGATTACTGCCCTCGACAGCCGCATaGGTCGCACAGACAGGTTCTGAAGGTTCACGGCAGGGGAAAGGA +
Preference number: 5 (lower is better)
Translates to: TVVQPFRGLLPSTAA*VAQTGSEGSRQGKG
Trigger: TCCTTTCCCCTGCCGTGAACCTTCAGAACCTGTCTGTGCGACTCATGCGGCTGTCGAGGGCAGTAATCCTCTAAATGGTTGAACTACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505457.1
CDS-3UTR CAA 90 bp AACAGAATTCCTTTCTCCACATTCCTAAAACTGGGTACCACGGTCCGCAATAATTGCATCCACAGGGCATaGGCCGGCCCCTTCTGCTCG +
Preference number: 5 (lower is better)
Translates to: NRIPFSTFLKLGTTVRNNCIHRA*AGPFCS
Trigger: CGAGCAGAAGGGGCCGGCCAATGCCCTGTGGATGCA...ATTATTGCGGACCGTGGTACCCAGTTTTAGGAATGTGGAGAAAGGAATTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CAA 90 bp AGAGATCAATCTAGAACTCCCCACTGCTGCACATGCATCAGATGTCATGGTAATGGCGACGGGTGGGCTTaGCTGCCCCACTTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: RDQSRTPHCCTCIRCHGNGDGWA*LPHFSL
Trigger: CAAAGAGAAGTGGGGCAGCAAAGCCCACCCGTCGCC...ATTACCATGACATCTGATGCATGTGCAGCAGTGGGGAGTTCTAGATTGATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CAA 90 bp GTGGTGCTCCAAAAACTCAGGGTTAGGCAGGATGGATATATTCTTGTTCAAAAACACGGCTCAGCCACGTaGTGCTTCCGCAGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: VVLQKLRVRQDGYILVQKHGSAT*CFRRAC
Trigger: GCAAGCCCTGCGGAAGCACAACGTGGCTGAGCCGTG...TTTTTGAACAAGAATATATCCATCCTGCCTAACCCTGAGTTTTTGGAGCACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CAA 90 bp CTCAACGGAATCAACAGAATTCCTTTCTCCACATTCCTAAAACTGGGTACCACGGTTTGCCACTGGGCATaGGCAAGGCGGTGGGTAAGC +
Preference number: 5 (lower is better)
Translates to: LNGINRIPFSTFLKLGTTVCHWA*ARRWVS
Trigger: GCTTACCCACCGCCTTGCCAATGCCCAGTGGCAAAC...CGTGGTACCCAGTTTTAGGAATGTGGAGAAAGGAATTCTGTTGATTCCGTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CAA 90 bp GCACAACGAGCTGTTCTTGAAGATGGACGCGACCACCACACGAAGAAACATGCAATTCGCTCTTTGATCTaGATCCTGCTGTCCATGCCT +
Preference number: 5 (lower is better)
Translates to: AQRAVLEDGRDHHTKKHAIRSLI*ILLSMP
Trigger: AGGCATGGACAGCAGGATCAAGATCAAAGAGCGAAT...TGCATGTTTCTTCGTGTGGTGGTCGCGTCCATCTTCAAGAACAGCTCGTTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CAA 90 bp ACAAAATGTGAGGGCAGTAAAACAATGACCTCCCAAGCTTATCCGTGGAGGAAAGCCTTGTCAAGGACTTaGATGGAACACGGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: TKCEGSKTMTSQAYPWRKALSRT*MEHGSA
Trigger: GGCTGAGCCGTGTTCCATCAAAGTCCTTGACAAGGC...TTTCCTCCACGGATAAGCTTGGGAGGTCATTGTTTTACTGCCCTCACATTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CAA 90 bp CAATCTAGAACTCCCCACTGCTGCACATGCATCAGATGTCATGGTAATAAGTATTTTCGGCGTCTCTGTTaGGATAGGACCTGGCCAGCG +
Preference number: 5 (lower is better)
Translates to: QSRTPHCCTCIRCHGNKYFRRLC*DRTWPA
Trigger: CGCTGGCCAGGTCCTATCCAAACAGAGACGCCGAAA...ATACTTATTACCATGACATCTGATGCATGTGCAGCAGTGGGGAGTTCTAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CAA 90 bp ATTTTAAAGCTTGTCCTTGCTGGGCGTCGATCACATTCAGAGATCAATCTAGAAGGTAAACACTGGGCGTaGTGCAGGGCGGTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: ILKLVLAGRRSHSEINLEGKHWA*CRAVCL
Trigger: CAGACACACCGCCCTGCACAACGCCCAGTGTTTACC...TTCTAGATTGATCTCTGAATGTGATCGACGCCCAGCAAGGACAAGCTTTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CAA 90 bp GCAGACATTTTAAAGCTTGTCCTTGCTGGGCGTCGATCACATTCAGAGATCAATGAGAGGAGCTGGCGCTaGCAGACTGAACTGGTAAAC +
Preference number: 5 (lower is better)
Translates to: ADILKLVLAGRRSHSEINERSWR*QTELVN
Trigger: GTTTACCAGTTCAGTCTGCAAGCGCCAGCTCCTCTC...ATTGATCTCTGAATGTGATCGACGCCCAGCAAGGACAAGCTTTAAAATGTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CAA 90 bp TTCCTAAAACTGGGTACCACGGTCCGCAATAATAGTCACCAGACCCATCATCACGCCAGGCCAATTCATTaGCTTCACCATGACGGAAAT +
Preference number: 5 (lower is better)
Translates to: FLKLGTTVRNNSHQTHHHARPIH*LHHDGN
Trigger: ATTTCCGTCATGGTGAAGCAAATGAATTGGCCTGGC...GTGATGATGGGTCTGGTGACTATTATTGCGGACCGTGGTACCCAGTTTTAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CAA 90 bp AGAGATCAATCTAGAACTCCCCACTGCTGCACATGCATCAGATGTCATGGTAATGTGGCTATTCGCTCTTaGATCTTGATCCTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: RDQSRTPHCCTCIRCHGNVAIRS*ILILLS
Trigger: GGACAGCAGGATCAAGATCAAAGAGCGAATAGCCAC...ATTACCATGACATCTGATGCATGTGCAGCAGTGGGGAGTTCTAGATTGATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CAA 90 bp ATTTTAAAGCTTGTCCTTGCTGGGCGTCGATCACATTCAGAGATCAATCTAGAACACAACGAGCTGTTCTaGAAGATGGACGCGACCACC +
Preference number: 5 (lower is better)
Translates to: ILKLVLAGRRSHSEINLEHNELF*KMDATT
Trigger: GGTGGTCGCGTCCATCTTCAAGAACAGCTCGTTGTG...TTCTAGATTGATCTCTGAATGTGATCGACGCCCAGCAAGGACAAGCTTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CAA 90 bp AGAGATCAATCTAGAACTCCCCACTGCTGCACATGCATCAGATGTCATGGTAATTCCGGGCATCAATTCTaGGATGCAACTGTAGAAAGC +
Preference number: 5 (lower is better)
Translates to: RDQSRTPHCCTCIRCHGNSGHQF*DATVES
Trigger: GCTTTCTACAGTTGCATCCAAGAATTGATGCCCGGA...ATTACCATGACATCTGATGCATGTGCAGCAGTGGGGAGTTCTAGATTGATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CAA 90 bp CTACAGATTCCTCAACGGAATCAACAGAATTCCTTTCTCCACATTCCTAAAACTTGCGTCTGCTCCCCATaGCATGTGGCTATTCGCTCT +
Preference number: 5 (lower is better)
Translates to: LQIPQRNQQNSFLHIPKTCVCSP*HVAIRS
Trigger: AGAGCGAATAGCCACATGCAATGGGGAGCAGACGCA...AGTTTTAGGAATGTGGAGAAAGGAATTCTGTTGATTCCGTTGAGGAATCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CAA 90 bp CTACAGATTCCTCAACGGAATCAACAGAATTCCTTTCTCCACATTCCTAAAACTACACACGAACGGGGTTaGATCTCCTCTGCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: LQIPQRNQQNSFLHIPKTTHERG*ISSAAL
Trigger: CAAAGCAGCAGAGGAGATCAAACCCCGTTCGTGTGT...AGTTTTAGGAATGTGGAGAAAGGAATTCTGTTGATTCCGTTGAGGAATCTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CAA 90 bp GCAGACATTTTAAAGCTTGTCCTTGCTGGGCGTCGATCACATTCAGAGATCAATCAAAGACAGTGGTTGTaGTGGCAGAATACACTTGCA +
Preference number: 5 (lower is better)
Translates to: ADILKLVLAGRRSHSEINQRQWL*WQNTLA
Trigger: TGCAAGTGTATTCTGCCACAACAACCACTGTCTTTG...ATTGATCTCTGAATGTGATCGACGCCCAGCAAGGACAAGCTTTAAAATGTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS GCA 90 bp GTAGTCTTCGACGTGATTCGAGTTCCTGGCAATGCTAAATTATTCTaGAACTTAACTTACGTGAAACTCCACACTTATCTACGCCCCACT +
Preference number: 5 (lower is better)
Translates to: VVFDVIRVPGNAKLF*NLTYVKLHTYLRPT
Trigger: AGTGGGGCGTAGATAAGTGTGGAGTTTCACGTAAGTTAAGTTGCAGAATAATTTAGCATTGCCAGGAACTCGAATCACGTCGAAGACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515721.1
CDS GCA 90 bp AGCATTCCAAGGTTTTCATCAGCTCTCCGGGCATCAATTCTTGGATaGAACTGTAAAAGCAATGCACCCACAATTTGTATGGATTCATGG +
Preference number: 5 (lower is better)
Translates to: SIPRFSSALRASILG*NCKSNAPTICMDSW
Trigger: CCATGAATCCATACAAATTGTGGGTGCATTGCTTTTACAGTTGCATCCAAGAATTGATGCCCGGAGAGCTGATGAAAACCTTGGAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511764.5
ENST00000514697.1
CDS CCA 90 bp GGATGCAACTGTAAAAGCAATGCACCCACAATTTGTATGGATTCATaGCATGTTCTAAAGAAAATAGCACGCGACGAAGTCTGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: GCNCKSNAPTICMDS*HVLKKIARDEVCCP
Trigger: TGGACAGCAGACTTCGTCGCGTGCTATTTTCTTTAGAACATGCCATGAATCCATACAAATTGTGGGTGCATTGCTTTTACAGTTGCATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511764.5
ENST00000514697.1
CDS-3UTR CAA 90 bp AACAGAATTCCTTTCTCCACATTCCTAAAACTGGGTACCACGGTCCGCAATAATTGTGGCAGAATACACTaGCATAGTATACCTGTATGC +
Preference number: 5 (lower is better)
Translates to: NRIPFSTFLKLGTTVRNNCGRIH*HSIPVC
Trigger: GCATACAGGTATACTATGCAAGTGTATTCTGCCACA...ATTATTGCGGACCGTGGTACCCAGTTTTAGGAATGTGGAGAAAGGAATTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS-3UTR CAA 90 bp ATTTTAAAGCTTGTCCTTGCTGGGCGTCGATCACATTCAGAGATCAATCTAGAAAATAAGTATCTTGTCTaGACATTCTCCACTAGTGGA +
Preference number: 5 (lower is better)
Translates to: ILKLVLAGRRSHSEINLENKYLV*TFSTSG
Trigger: TCCACTAGTGGAGAATGTCAAGACAAGATACTTATT...TTCTAGATTGATCTCTGAATGTGATCGACGCCCAGCAAGGACAAGCTTTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS CAA 90 bp TGCCCGTTGGCTGTGCCAGGGGCGCTGGGCGCGCCGTCGGCGAAGTaGAAGAAGGCGCCGCCGCGGCCGCCGCCCGGCCGGCCCAGCGAG +
Preference number: 6 (lower is better)
Translates to: CPLAVPGALGAPSAK*KKAPPRPPPGRPSE
Trigger: CTCGCTGGGCCGGCCGGGCGGCGGCCGCGGCGGCGCCTTCTTCAACTTCGCCGACGGCGCGCCCAGCGCCCCTGGCACAGCCAACGGGCA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS TCA 72 bp CCCCCGCCGCGGCCGCCGTGTCCAGCGCCGGCGAGTTaGGGCAGAAATAGGACGCGAAGCCCGAGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: PPPRPPCPAPAS*GRNRTRSPSRR
Trigger: GCGGCGGCTCGGGCTTCGCGTCCTATTTCTGCCTCAACTCGCCGGCGCTGGACACGGCGGCCGCGGCGGGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS GCA 72 bp CCCTCAGTCACGCTCGCGCCGCTGGCTCGGCGCTCCTaGGGCGGCGGCGGCGGCGGCGGTGAAAAGACACTC +
Preference number: 6 (lower is better)
Translates to: PSVTLAPLARRS*GGGGGGGEKTL
Trigger: GAGTGTCTTTTCACCGCCGCCGCCGCCGCCGCCGCAGGAGCGCCGAGCCAGCGGCGCGAGCGTGACTGAGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS GCA 72 bp CATCCTCCAAAAGCCCGGGCGCCTGGGACGGGTGTCTaGACCGCGGGCGCCGGCCAGGACCATGGGCCCCGC +
Preference number: 6 (lower is better)
Translates to: HPPKARAPGTGV*TAGAGQDHGPR
Trigger: GCGGGGCCCATGGTCCTGGCCGGCGCCCGCGGTGCAGACACCCGTCCCAGGCGCCCGGGCTTTTGGAGGATG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515721.1
CDS CCA 72 bp GTGCTGGCCTTGTTCTCGCGTTTCCGGCGACCCGGGTaGAACTGGTGCTGCGACGGGGAGCCGGCGGGCGCG +
Preference number: 6 (lower is better)
Translates to: VLALFSRFRRPG*NWCCDGEPAGA
Trigger: CGCGCCCGCCGGCTCCCCGTCGCAGCACCAGTTCCACCCGGGTCGCCGGAAACGCGAGAACAAGGCCAGCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS CAA 90 bp GAGGACGACGACGAGCAGCCGGGGCTCTCGGTGCCCGACTCCGCGTaGGACGAGGAGGACGACGACGAGGACGACAGCGACGGCGACTTG +
Preference number: 6 (lower is better)
Translates to: EDDDEQPGLSVPDSA*DEEDDDEDDSDGDL
Trigger: CAAGTCGCCGTCGCTGTCGTCCTCGTCGTCGTCCTCCTCGTCCAACGCGGAGTCGGGCACCGAGAGCCCCGGCTGCTCGTCGTCGTCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230859.8
CDS CCA 72 bp AGCCTTCAACATCCATCCTCCAAAAGCCCGGGCGCCTaGGACGGGTGTCTGCACCGCGGGCGCCGGCCAGGA +
Preference number: 6 (lower is better)
Translates to: SLQHPSSKSPGA*DGCLHRGRRPG
Trigger: TCCTGGCCGGCGCCCGCGGTGCAGACACCCGTCCCAGGCGCCCGGGCTTTTGGAGGATGGATGTTGAAGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515721.1
CDS GCA 72 bp TCCAGCCGGTGCGGTTATACTGGTGGTGTCCCCTGTTaGCCACAGGGGGCCGCACACCTCCGCTACCCACAG +
Preference number: 6 (lower is better)
Translates to: SSRCGYTGGVPC*PQGAAHLRYPQ
Trigger: CTGTGGGTAGCGGAGGTGTGCGGCCCCCTGTGGGCAACAGGGGACACCACCAGTATAACCGCACCGGCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230859.8
ENST00000514697.1
ENST00000631941.2
CDS CAA 72 bp CTCCAGCCGGTGCGGTTATACTGGTGGTGTCCCCTGTaGCCCACAGGGGGCCGCACACCTCCGCTACCCACA +
Preference number: 6 (lower is better)
Translates to: LQPVRLYWWCPL*PTGGRTPPLPT
Trigger: TGTGGGTAGCGGAGGTGTGCGGCCCCCTGTGGGCAACAGGGGACACCACCAGTATAACCGCACCGGCTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230859.8
ENST00000514697.1
ENST00000631941.2
CDS CAA 90 bp AGGGGGCCGCACACCTCCGCTACCCACAGAGCTGTAGCCGCCGCCTaGGGTGTGGCCGTGAGAGCCCTTCATGGACAGTTTCATGCCGTT +
Preference number: 6 (lower is better)
Translates to: RGPHTSATHRAVAAA*GVAVRALHGQFHAV
Trigger: AACGGCATGAAACTGTCCATGAAGGGCTCTCACGGCCACACCCAAGGCGGCGGCTACAGCTCTGTGGGTAGCGGAGGTGTGCGGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230859.8
ENST00000514697.1
ENST00000631941.2
CDS CCA 72 bp GAGGGCTCGAGAGCGGGTTGGGGGACGCTGAGGGAATaGCCGGGGAAGACATGTGGTGGACGGCTTTCAAAG +
Preference number: 6 (lower is better)
Translates to: EGSRAGWGTLRE*PGKTCGGRLSK
Trigger: CTTTGAAAGCCGTCCACCACATGTCTTCCCCGGCCATTCCCTCAGCGTCCCCCAACCCGCTCTCGAGCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230859.8
ENST00000514697.1
ENST00000631941.2
CDS TCA 72 bp TGGGGGAGGCTGACGCAGCCAGGAGCCATTATCTGCTaGGGCTCACGGGCAGACTGTCCCGTGTGTGTGTGT +
Preference number: 6 (lower is better)
Translates to: WGRLTQPGAIIC*GSRADCPVCVC
Trigger: ACACACACACACGGGACAGTCTGCCCGTGAGCCTCAGCAGATAATGGCTCCTGGCTGCGTCAGCCTCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230859.8
ENST00000514697.1
ENST00000631941.2
CDS TCA 72 bp GCCCTCGACAGCCGCATGAGTCGCACAGACAGGTTCTaGAGGTTCACGGCAGGGGAAAGGAAGCCTGGTGCC +
Preference number: 6 (lower is better)
Translates to: ALDSRMSRTDRF*RFTAGERKPGA
Trigger: GGCACCAGGCTTCCTTTCCCCTGCCGTGAACCTTCAGAACCTGTCTGTGCGACTCATGCGGCTGTCGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505457.1
CDS CAA 72 bp CACACCTCCGCTACCCACAGAGCTGTAGCCGCCGCCTaGGGTGTGGCCGTGAGAGCCCTTCATGGACAGTTT +
Preference number: 6 (lower is better)
Translates to: HTSATHRAVAAA*GVAVRALHGQF
Trigger: AAACTGTCCATGAAGGGCTCTCACGGCCACACCCAAGGCGGCGGCTACAGCTCTGTGGGTAGCGGAGGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230859.8
ENST00000514697.1
ENST00000631941.2
CDS GCA 72 bp GAACACGGCTCAGCCACGTTGTGCTTCCGCAGGGCTTaGTCCAGCAGCTGTAAAGGAGGACGCTCCCATTTC +
Preference number: 6 (lower is better)
Translates to: EHGSATLCFRRA*SSSCKGGRSHF
Trigger: GAAATGGGAGCGTCCTCCTTTACAGCTGCTGGAGCAAGCCCTGCGGAAGCACAACGTGGCTGAGCCGTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230859.8
ENST00000631941.2
CDS CCA 72 bp GCTGCTTATGATACAGATGAGGGCTCGAGAGCGGGTTaGGGGACGCTGAGGGAATGGCCGGGGAAGACATGT +
Preference number: 6 (lower is better)
Translates to: AAYDTDEGSRAG*GTLREWPGKTC
Trigger: ACATGTCTTCCCCGGCCATTCCCTCAGCGTCCCCCAACCCGCTCTCGAGCCCTCATCTGTATCATAAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230859.8
ENST00000514697.1
ENST00000631941.2
CDS CAA 90 bp ACCGTAGCCTTGTCAAGGACTTTGATGGAACACGGCTCAGCCACGTaGTGCTTCCGCAGGGCTTGCTCCAGCAGCTGTAAAGGAGGACGC +
Preference number: 6 (lower is better)
Translates to: TVALSRTLMEHGSAT*CFRRACSSSCKGGR
Trigger: GCGTCCTCCTTTACAGCTGCTGGAGCAAGCCCTGCGGAAGCACAACGTGGCTGAGCCGTGTTCCATCAAAGTCCTTGACAAGGCTACGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230859.8
ENST00000631941.2
CDS CCA 72 bp GGGGACGCTGAGGGAATGGCCGGGGAAGACATGTGGTaGACGGCTTTCAAAGACGCAGTTCCTTCTACACCA +
Preference number: 6 (lower is better)
Translates to: GDAEGMAGEDMW*TAFKDAVPSTP
Trigger: TGGTGTAGAAGGAACTGCGTCTTTGAAAGCCGTCCACCACATGTCTTCCCCGGCCATTCCCTCAGCGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230859.8
ENST00000514697.1
ENST00000631941.2
CDS TCA 72 bp AGGAAACTTGCAGGAAGGCAGTCAACCTGGCCCCCGTaGAAAGCCACGGCAGCACTCAAGAACCACAGTGTC +
Preference number: 6 (lower is better)
Translates to: RKLAGRQSTWPP*KATAALKNHSV
Trigger: GACACTGTGGTTCTTGAGTGCTGCCGTGGCTTTTCACGGGGGCCAGGTTGACTGCCTTCCTGCAAGTTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514410.1
CDS CCA 72 bp TTGGGGGACGCTGAGGGAATGGCCGGGGAAGACATGTaGTGGACGGCTTTCAAAGACGCAGTTCCTTCTACA +
Preference number: 6 (lower is better)
Translates to: LGDAEGMAGEDM*WTAFKDAVPST
Trigger: TGTAGAAGGAACTGCGTCTTTGAAAGCCGTCCACCACATGTCTTCCCCGGCCATTCCCTCAGCGTCCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230859.8
ENST00000514697.1
ENST00000631941.2
CDS CCA 72 bp AGCCGCCGCCTTGGGTGTGGCCGTGAGAGCCCTTCATaGACAGTTTCATGCCGTTGTGCTGCTTATGATACA +
Preference number: 6 (lower is better)
Translates to: SRRLGCGRESPS*TVSCRCAAYDT
Trigger: TGTATCATAAGCAGCACAACGGCATGAAACTGTCCATGAAGGGCTCTCACGGCCACACCCAAGGCGGCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230859.8
ENST00000514697.1
ENST00000631941.2
CDS CAA 72 bp TGCTCCCCATTGCATGTGGCTATTCGCTCTTTGATCTaGATCCTGCTGTCCATGCCTGGCGACGGGTGGGCT +
Preference number: 6 (lower is better)
Translates to: CSPLHVAIRSLI*ILLSMPGDGWA
Trigger: AGCCCACCCGTCGCCAGGCATGGACAGCAGGATCAAGATCAAAGAGCGAATAGCCACATGCAATGGGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230859.8
ENST00000505457.1
ENST00000514697.1
ENST00000631941.2
CDS CAA 72 bp TGCGTCTGCTCCCCATTGCATGTGGCTATTCGCTCTTaGATCTTGATCCTGCTGTCCATGCCTGGCGACGGG +
Preference number: 6 (lower is better)
Translates to: CVCSPLHVAIRS*ILILLSMPGDG
Trigger: CCCGTCGCCAGGCATGGACAGCAGGATCAAGATCAAAGAGCGAATAGCCACATGCAATGGGGAGCAGACGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230859.8
ENST00000505457.1
ENST00000514697.1
ENST00000631941.2
CDS TCA 72 bp TTGGTTGTCATGATCAGTGTTCTGGAAGTGGTGGGCTaGGGTTTGCCACTGGGCATTGGCAAGGCGGTGGGT +
Preference number: 6 (lower is better)
Translates to: LVVMISVLEVVG*GLPLGIGKAVG
Trigger: ACCCACCGCCTTGCCAATGCCCAGTGGCAAACCTCAGCCCACCACTTCCAGAACACTGATCATGACAACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230859.8
ENST00000514410.1
ENST00000514697.1
ENST00000631941.2
CDS GCA 72 bp TCAAGGACTTTGATGGAACACGGCTCAGCCACGTTGTaGTTCCGCAGGGCTTGCTCCAGCAGCTGTAAAGGA +
Preference number: 6 (lower is better)
Translates to: SRTLMEHGSATL*FRRACSSSCKG
Trigger: TCCTTTACAGCTGCTGGAGCAAGCCCTGCGGAAGCACAACGTGGCTGAGCCGTGTTCCATCAAAGTCCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230859.8
ENST00000631941.2
CDS GCA 72 bp GGGTGTGGCCGTGAGAGCCCTTCATGGACAGTTTCATaGCGTTGTGCTGCTTATGATACAGATGAGGGCTCG +
Preference number: 6 (lower is better)
Translates to: GCGRESPSWTVS*RCAAYDTDEGS
Trigger: CGAGCCCTCATCTGTATCATAAGCAGCACAACGGCATGAAACTGTCCATGAAGGGCTCTCACGGCCACACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230859.8
ENST00000514697.1
ENST00000631941.2
CDS CAA 72 bp GGAGACTCGGGCTCTCGGTTCTGCGTCTGCTCCCCATaGCATGTGGCTATTCGCTCTTTGATCTTGATCCTG +
Preference number: 6 (lower is better)
Translates to: GDSGSRFCVCSP*HVAIRSLILIL
Trigger: CAGGATCAAGATCAAAGAGCGAATAGCCACATGCAATGGGGAGCAGACGCAGAACCGAGAGCCCGAGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230859.8
ENST00000505457.1
ENST00000514697.1
ENST00000631941.2
CDS TCA 72 bp CAACCATTTAGAGGATTACTGCCCTCGACAGCCGCATaGGTCGCACAGACAGGTTCTGAAGGTTCACGGCAG +
Preference number: 6 (lower is better)
Translates to: QPFRGLLPSTAA*VAQTGSEGSRQ
Trigger: CTGCCGTGAACCTTCAGAACCTGTCTGTGCGACTCATGCGGCTGTCGAGGGCAGTAATCCTCTAAATGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505457.1
CDS TCA 72 bp GTGCCAGAGGGCCACGTACCTGATTGTTGGTTGTCATaGTCAGTGTTCTGGAAGTGGTGGGCTGAGGTTTGC +
Preference number: 6 (lower is better)
Translates to: VPEGHVPDCWLS*SVFWKWWAEVC
Trigger: GCAAACCTCAGCCCACCACTTCCAGAACACTGATCATGACAACCAACAATCAGGTACGTGGCCCTCTGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514410.1
CDS GCA 72 bp CTTTCAAAGACGCAGTTCCTTCTACACCAGCTTGTCTaGAAGGAACAGGAGCAACCCCTAGGGTCGGTGGAG +
Preference number: 6 (lower is better)
Translates to: LSKTQFLLHQLV*KEQEQPLGSVE
Trigger: CTCCACCGACCCTAGGGGTTGCTCCTGTTCCTTGCAGACAAGCTGGTGTAGAAGGAACTGCGTCTTTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230859.8
ENST00000514697.1
ENST00000631941.2
CDS CAA 72 bp TTGTCAAGGACTTTGATGGAACACGGCTCAGCCACGTaGTGCTTCCGCAGGGCTTGCTCCAGCAGCTGTAAA +
Preference number: 6 (lower is better)
Translates to: LSRTLMEHGSAT*CFRRACSSSCK
Trigger: TTTACAGCTGCTGGAGCAAGCCCTGCGGAAGCACAACGTGGCTGAGCCGTGTTCCATCAAAGTCCTTGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230859.8
ENST00000631941.2
CDS TCA 72 bp CACGGCAGCACTCAAGAACCACAGTGTCCTCGCTGCTaGAACTATACATGGGGGACCTCAACACCACAAAAA +
Preference number: 6 (lower is better)
Translates to: HGSTQEPQCPRC*NYTWGTSTPQK
Trigger: TTTTTGTGGTGTTGAGGTCCCCCATGTATAGTTTCAGCAGCGAGGACACTGTGGTTCTTGAGTGCTGCCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514410.1
CDS CAA 72 bp AGCTTTATTATTGGTACCGTAGCCTTGTCAAGGACTTaGATGGAACACGGCTCAGCCACGTTGTGCTTCCGC +
Preference number: 6 (lower is better)
Translates to: SFIIGTVALSRT*MEHGSATLCFR
Trigger: GCGGAAGCACAACGTGGCTGAGCCGTGTTCCATCAAAGTCCTTGACAAGGCTACGGTACCAATAATAAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230859.8
ENST00000631941.2
CDS CCA 72 bp AGCAGCCCCTTTTCTTGGACTGTTACTTGTAGGATCTaGGCAAGTCACTCCACGATAAATGAGTCTGATGTT +
Preference number: 6 (lower is better)
Translates to: SSPFSWTVTCRI*ASHSTINESDV
Trigger: AACATCAGACTCATTTATCGTGGAGTGACTTGCCCAGATCCTACAAGTAACAGTCCAAGAAAAGGGGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515721.1
ENST00000631941.2
CDS GCA 72 bp AGGTTTTCATCAGCTCTCCGGGCATCAATTCTTGGATaGAACTGTAAAAGCAATGCACCCACAATTTGTATG +
Preference number: 6 (lower is better)
Translates to: RFSSALRASILG*NCKSNAPTICM
Trigger: CATACAAATTGTGGGTGCATTGCTTTTACAGTTGCATCCAAGAATTGATGCCCGGAGAGCTGATGAAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511764.5
ENST00000514697.1
CDS CAA 90 bp CAAGAAGCATTCCAAGGTTTTCATCAGCTCTCCGGGCATCAATTCTaGGATGCAACTGTAAAAGCAATGCACCCACAATTTGTATGGATT +
Preference number: 6 (lower is better)
Translates to: QEAFQGFHQLSGHQF*DATVKAMHPQFVWI
Trigger: AATCCATACAAATTGTGGGTGCATTGCTTTTACAGTTGCATCCAAGAATTGATGCCCGGAGAGCTGATGAAAACCTTGGAATGCTTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511764.5
ENST00000514697.1
CDS GCA 72 bp GACGTGATTCGAGTTCCTGGCAATGCTAAATTATTCTaGAACTTAACTTACGTGAAACTCCACACTTATCTA +
Preference number: 6 (lower is better)
Translates to: DVIRVPGNAKLF*NLTYVKLHTYL
Trigger: TAGATAAGTGTGGAGTTTCACGTAAGTTAAGTTGCAGAATAATTTAGCATTGCCAGGAACTCGAATCACGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515721.1