RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TENT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000164329

Ensembl transcript IDs: ENST00000296783.7, ENST00000423041.6, ENST00000428308.6, ENST00000453514.5, ENST00000453514.6, ENST00000502269.1, ENST00000503620.1, ENST00000504233.5, ENST00000504982.1, ENST00000505571.5, ENST00000505770.1, ENST00000508620.5, ENST00000509227.1, ENST00000510721.1, ENST00000513735.5, ENST00000514095.5, ENST00000515298.5, ENST00000515807.5

Found 199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGACTCAGTCTATCCCAGTaGGTCAAGCAAAGACTTAAG +
Preference number: 2 (lower is better)
Translates to: LTLISVSVASCHRENRAGLSLSQ*VKQRLK
Trigger: CTTAAGTCTTTGCTTGACTCACTGGGATAGACTGAG...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000453514.5
ENST00000504233.5
3UTR-3UTR GCA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGATCAGTATTTCATGACTaGAGTGATTTGACTGAAATG +
Preference number: 2 (lower is better)
Translates to: LTLISVSVASCHRENRAGSVFHD*SDLTEM
Trigger: CATTTCAGTCAAATCACTGCAGTCATGAAATACTGA...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000453514.5
ENST00000504233.5
3UTR-3UTR GCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGTCAGTATTTCATGACTaGAGTGATTTGACTGAAATG +
Preference number: 2 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLSVFHD*SDLTEM
Trigger: CATTTCAGTCAAATCACTGCAGTCATGAAATACTGA...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000453514.5
ENST00000504233.5
3UTR-3UTR CAA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGACATGACTGCAGTGATTaGACTGAAATGAAAGATTTC +
Preference number: 3 (lower is better)
Translates to: LTLISVSVASCHRENRAGHDCSD*TEMKDF
Trigger: GAAATCTTTCATTTCAGTCAAATCACTGCAGTCATG...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000453514.5
ENST00000504233.5
CDS-3UTR CCA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATGCCCCGCCGCCGACCTaGGCCTACACTGCTGCGTTC +
Preference number: 4 (lower is better)
Translates to: TLSKILHISSGLACGTINAPPPT*AYTAAF
Trigger: GAACGCAGCAGTGTAGGCCCAGGTCGGCGGCGGGGC...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504233.5
CDS-3UTR GCA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATCGGAAAAGTTTCCCGTaGCCCGCCGCCGACCTGGGC +
Preference number: 4 (lower is better)
Translates to: TLSKILHISSGLACGTINRKSFP*PAADLG
Trigger: GCCCAGGTCGGCGGCGGGGCACGGGAAACTTTTCCG...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504233.5
CDS-3UTR CCA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACTTGGTCCTGGAGTGGTaGACGAGGCAGTACGCGAGG +
Preference number: 4 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYLVLEW*TRQYAR
Trigger: CCTCGCGTACTGCCTCGTCCACCACTCCAGGACCAA...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504233.5
CDS-3UTR GCA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGAGACCTGGGCCTACACTaGTGCGTTCCTCTCCGAAAC +
Preference number: 4 (lower is better)
Translates to: LTLISVSVASCHRENRAGDLGLH*CVPLRN
Trigger: GTTTCGGAGAGGAACGCAGCAGTGTAGGCCCAGGTC...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504233.5
CDS-3UTR GCA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGAAGGGCCTACCCGCACTaGCCGTTCAGAAGTTCTAAG +
Preference number: 4 (lower is better)
Translates to: LTLISVSVASCHRENRAGRAYPH*PFRSSK
Trigger: CTTAGAACTTCTGAACGGGCAGTGCGGGTAGGCCCT...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296783.7
ENST00000504233.5
CDS-3UTR GCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGCTGGGCCTACACTGCTaGGTTCCTCTCCGAAACCCC +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRLGLHC*VPLRNP
Trigger: GGGGTTTCGGAGAGGAACGCAGCAGTGTAGGCCCAG...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504233.5
CDS-3UTR CCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGCTTTTGGTCCTGGAGTaGTGGACGAGGCAGTACGCG +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLLLVLE*WTRQYA
Trigger: CGCGTACTGCCTCGTCCACCACTCCAGGACCAAAAG...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504233.5
CDS-3UTR TCA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACTGGCTCTTGGTGGGGTaGATGGAAACGTTGCCGTTT +
Preference number: 4 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYWLLVG*METLPF
Trigger: AAACGGCAACGTTTCCATTCACCCCACCAAGAGCCA...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGGAAGGTTGGGGGCGGTaGCAAAAAGCGGAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLEGWGR*QKAEEQ
Trigger: TTGCTCTTCCGCTTTTTGCCACCGCCCCCAACCTTC...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGATTCTTCACCACCCTTTaGAACACCATGCAAGGGTCC +
Preference number: 4 (lower is better)
Translates to: LTLISVSVASCHRENRAGFFTTL*NTMQGS
Trigger: GGACCCTTGCATGGTGTTTCAAAGGGTGGTGAAGAA...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACGTTGATGATTTGGAGTaGAGGGTGGGCGACCCAAAA +
Preference number: 4 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYVDDLE*RVGDPK
Trigger: TTTTGGGTCGCCCACCCTTCACTCCAAATCATCAAC...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGAACAGTTGGCTCTTGGTaGGGTGAATGGAAACGTTGC +
Preference number: 4 (lower is better)
Translates to: LTLISVSVASCHRENRAGTVGSW*GEWKRC
Trigger: GCAACGTTTCCATTCACCCCACCAAGAGCCAACTGT...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGGAAGGTTGGGGGCGGTaGCAAAAAGCGGAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFREGWGR*QKAEEQ
Trigger: TTGCTCTTCCGCTTTTTGCCACCGCCCCCAACCTTC...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAAGGATATAGAAGGTTaGGGGCGGTGGCAAAAAGCG +
Preference number: 4 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYKDIEG*GRWQKA
Trigger: CGCTTTTTGCCACCGCCCCCAACCTTCTATATCCTT...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGTTCCTCTTTTGGTCCTaGAGTGGTGGACGAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLFLFWS*SGGRGS
Trigger: ACTGCCTCGTCCACCACTCCAGGACCAAAAGAGGAA...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504233.5
CDS-3UTR TCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGTTCTTCACCACCCTTTaGAACACCATGCAAGGGTCC +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLFFTTL*NTMQGS
Trigger: GGACCCTTGCATGGTGTTTCAAAGGGTGGTGAAGAA...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGTGGCTCTTGGTGGGGTaGATGGAAACGTTGCCGTTT +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRWLLVG*METLPF
Trigger: AAACGGCAACGTTTCCATTCACCCCACCAAGAGCCA...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR GCA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACGGTGAATGGAAACGTTaGCGTTTACCGTCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYGEWKR*RLPSRG
Trigger: TCCTCTTGACGGTAAACGGCAACGTTTCCATTCACC...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGTCTTGGTGGGGTGAATaGAAACGTTGCCGTTTACCG +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLSWWGE*KRCRLP
Trigger: CGGTAAACGGCAACGTTTCCATTCACCCCACCAAGA...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACACTACAGTTGGCTCTTaGTGGGGTGAATGGAAACGT +
Preference number: 4 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYTTVGS*WGEWKR
Trigger: ACGTTTCCATTCACCCCACCAAGAGCCAACTGTAGT...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGAACTACAGTTGGCTCTTaGTGGGGTGAATGGAAACGT +
Preference number: 4 (lower is better)
Translates to: LTLISVSVASCHRENRAGTTVGS*WGEWKR
Trigger: ACGTTTCCATTCACCCCACCAAGAGCCAACTGTAGT...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGCATCAGGCCTTGGAATaGCTTTGGCTTCACGAACTG +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLHQALE*LWLHEL
Trigger: CAGTTCGTGAAGCCAAAGCCATTCCAAGGCCTGATG...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGAAGGATATAGAAGGTTaGGGGCGGTGGCAAAAAGCG +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLKDIEG*GRWQKA
Trigger: CGCTTTTTGCCACCGCCCCCAACCTTCTATATCCTT...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGACTATCTTCCTCTTTTaGTCCCGCACTGCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLTIFLF*SRTARS
Trigger: TGAACGGGCAGTGCGGGACCAAAAGAGGAAGATAGT...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423041.6
CDS-3UTR TCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGTGGGCGACCCAAAATTaGGTTTGGGAACATGCTCTT +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLWATQN*VWEHAL
Trigger: AAGAGCATGTTCCCAAACTCAATTTTGGGTCGCCCA...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATGTTGATGATTTGGAGTaGAGGGTGGGCGACCCAAAA +
Preference number: 4 (lower is better)
Translates to: TLSKILHISSGLACGTINVDDLE*RVGDPK
Trigger: TTTTGGGTCGCCCACCCTTCACTCCAAATCATCAAC...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAACTCCAGTATCTGCTaGCTCAACTTATCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYNSSIC*LNLSLA
Trigger: GGCCAAAGATAAGTTGAGTCAGCAGATACTGGAGTT...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGAAACTCCAGTATCTGCTaGCTCAACTTATCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: LTLISVSVASCHRENRAGNSSIC*LNLSLA
Trigger: GGCCAAAGATAAGTTGAGTCAGCAGATACTGGAGTT...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGAGTTTATGGACTAAGGTaGGTATATGCCGTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LTLISVSVASCHRENRAGVYGLR*VYAVLQ
Trigger: CTGAAGCACGGCATATACTCACCTTAGTCCATAAAC...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGAACATTACATGGAGCTTaGTGTACAAGGTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LTLISVSVASCHRENRAGTLHGA*CTRCSC
Trigger: ACAGCTGCACCTTGTACATCAAGCTCCATGTAATGT...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACACATTACATGGAGCTTaGTGTACAAGGTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYTLHGA*CTRCSC
Trigger: ACAGCTGCACCTTGTACATCAAGCTCCATGTAATGT...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR GCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGCTGCTTTTCGTGCACTaGTCTGGCTGTATTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLLLFVH*SGCICS
Trigger: GGAACAAATACAGCCAGAGCAGTGCACGAAAAGCAG...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR GCA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATCTTTTGGTCCCGCACTaGCCGTTCAGAAGTTCTAAG +
Preference number: 4 (lower is better)
Translates to: TLSKILHISSGLACGTINLLVPH*PFRSSK
Trigger: CTTAGAACTTCTGAACGGGCAGTGCGGGACCAAAAG...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423041.6
CDS-3UTR CCA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATTCTTGGTGGGGTGAATaGAAACGTTGCCGTTTACCG +
Preference number: 4 (lower is better)
Translates to: TLSKILHISSGLACGTINSWWGE*KRCRLP
Trigger: CGGTAAACGGCAACGTTTCCATTCACCCCACCAAGA...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGTCTTGGTGGGGTGAATaGAAACGTTGCCGTTTACCG +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRSWWGE*KRCRLP
Trigger: CGGTAAACGGCAACGTTTCCATTCACCCCACCAAGA...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGACAGTTGGCTCTTGGTaGGGTGAATGGAAACGTTGC +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRTVGSW*GEWKRC
Trigger: GCAACGTTTCCATTCACCCCACCAAGAGCCAACTGT...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGCATCAGGCCTTGGAATaGCTTTGGCTTCACGAACTG +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRHQALE*LWLHEL
Trigger: CAGTTCGTGAAGCCAAAGCCATTCCAAGGCCTGATG...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATCATCAGGCCTTGGAATaGCTTTGGCTTCACGAACTG +
Preference number: 4 (lower is better)
Translates to: TLSKILHISSGLACGTINHQALE*LWLHEL
Trigger: CAGTTCGTGAAGCCAAAGCCATTCCAAGGCCTGATG...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGAATACCATCAGGCCTTaGAATGGCTTTGGCTTCACG +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLNTIRP*NGFGFT
Trigger: CGTGAAGCCAAAGCCATTCCAAGGCCTGATGGTATT...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGACTATCTTCCTCTTTTaGTCCTGGAGTGGTGGACGA +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLTIFLF*SWSGGR
Trigger: TCGTCCACCACTCCAGGACCAAAAGAGGAAGATAGT...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504233.5
CDS-3UTR TCA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGAAGGTCTGTATTGGACTaGCATTTCCATATGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LTLISVSVASCHRENRAGRSVLD*HFHMSA
Trigger: AGCTGACATATGGAAATGTCAGTCCAATACAGACCT...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACTGTGGAAATAACAGCTaGATTTCTCTCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYCGNNS*ISLCSC
Trigger: ACAGCTGCAGAGAGAAATTCAGCTGTTATTTCCACA...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGGTTTATGGACTAAGGTaGGTATATGCCGTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLVYGLR*VYAVLQ
Trigger: CTGAAGCACGGCATATACTCACCTTAGTCCATAAAC...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGCTCAGTCTATCCCAGTaGGTCAAGCAAAGACTTAAG +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLLSLSQ*VKQRLK
Trigger: CTTAAGTCTTTGCTTGACTCACTGGGATAGACTGAG...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR GCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGGGTGAATGGAAACGTTaGCGTTTACCGTCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRGEWKR*RLPSRG
Trigger: TCCTCTTGACGGTAAACGGCAACGTTTCCATTCACC...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR GCA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACATAAATCACCATCACTaGTCCGGGTACCAAATCCAT +
Preference number: 4 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYINHHH*SGYQIH
Trigger: ATGGATTTGGTACCCGGAGCAGTGATGGTGATTTAT...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR GCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGCACAATTGGCACTTTTaGTCGAATCAGCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLHNWHF*SNQLRS
Trigger: AGACCTCAGCTGATTCGAGCAAAAGTGCCAATTGTG...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR GCA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACTATCTGATGGTGACTTaGCCACTTCTTAATCACCAG +
Preference number: 4 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYYLMVT*PLLNHQ
Trigger: CTGGTGATTAAGAAGTGGGCAAGTCACCATCAGATA...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296783.7
ENST00000423041.6
CDS-3UTR GCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGCTGCTTTTCGTGCACTaGTCTGGCTGTATTTGTTCC +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRLLFVH*SGCICS
Trigger: GGAACAAATACAGCCAGAGCAGTGCACGAAAAGCAG...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR GCA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATCTGCTTTTCGTGCACTaGTCTGGCTGTATTTGTTCC +
Preference number: 4 (lower is better)
Translates to: TLSKILHISSGLACGTINLLFVH*SGCICS
Trigger: GGAACAAATACAGCCAGAGCAGTGCACGAAAAGCAG...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGACTACAGTTGGCTCTTaGTGGGGTGAATGGAAACGT +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRTTVGS*WGEWKR
Trigger: ACGTTTCCATTCACCCCACCAAGAGCCAACTGTAGT...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAGGAGGAACATTACATaGAGCTTGATGTACAAGGTG +
Preference number: 4 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYRRNIT*SLMYKV
Trigger: CACCTTGTACATCAAGCTCCATGTAATGTTCCTCCT...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGGCCTTGGAATGGCTTTaGCTTCACGAACTGAAATCA +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLALEWL*LHELKS
Trigger: TGATTTCAGTTCGTGAAGCCAAAGCCATTCCAAGGC...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGAATACCATCAGGCCTTaGAATGGCTTTGGCTTCACG +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRNTIRP*NGFGFT
Trigger: CGTGAAGCCAAAGCCATTCCAAGGCCTGATGGTATT...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATAATACCATCAGGCCTTaGAATGGCTTTGGCTTCACG +
Preference number: 4 (lower is better)
Translates to: TLSKILHISSGLACGTINNTIRP*NGFGFT
Trigger: CGTGAAGCCAAAGCCATTCCAAGGCCTGATGGTATT...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACGACAAGTCTGCATTCTaGAAGTTGAATTGTGCATCT +
Preference number: 4 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYDKSAF*KLNCAS
Trigger: AGATGCACAATTCAACTTTCAGAATGCAGACTTGTC...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGAGGTCTGTATTGGACTaGCATTTCCATATGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLRSVLD*HFHMSA
Trigger: AGCTGACATATGGAAATGTCAGTCCAATACAGACCT...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGGTTTATGGACTAAGGTaGGTATATGCCGTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRVYGLR*VYAVLQ
Trigger: CTGAAGCACGGCATATACTCACCTTAGTCCATAAAC...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATCTCAGTCTATCCCAGTaGGTCAAGCAAAGACTTAAG +
Preference number: 4 (lower is better)
Translates to: TLSKILHISSGLACGTINLSLSQ*VKQRLK
Trigger: CTTAAGTCTTTGCTTGACTCACTGGGATAGACTGAG...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR GCA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGACTGAAAGTTGAATTGTaGATCTATAAGCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LTLISVSVASCHRENRAGLKVEL*IYKLLV
Trigger: CACCAGCAGCTTATAGATGCACAATTCAACTTTCAG...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR GCA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACCTGAAAGTTGAATTGTaGATCTATAAGCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYLKVEL*IYKLLV
Trigger: CACCAGCAGCTTATAGATGCACAATTCAACTTTCAG...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR GCA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATCACAATTGGCACTTTTaGTCGAATCAGCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: TLSKILHISSGLACGTINHNWHF*SNQLRS
Trigger: AGACCTCAGCTGATTCGAGCAAAAGTGCCAATTGTG...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR GCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGCACAATTGGCACTTTTaGTCGAATCAGCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRHNWHF*SNQLRS
Trigger: AGACCTCAGCTGATTCGAGCAAAAGTGCCAATTGTG...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR GCA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGAAATTTCTGCTTTTCGTaGACTGCTCTGGCTGTATTT +
Preference number: 4 (lower is better)
Translates to: LTLISVSVASCHRENRAGNFCFS*TALAVF
Trigger: AAATACAGCCAGAGCAGTGCACGAAAAGCAGAAATT...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR GCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATAACCAAGAGATACTaGTGGAACCTCCCACGCAAA +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRITKRY*WNLPRK
Trigger: TTTGCGTGGGAGGTTCCAGCAGTATCTCTTGGTTAT...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504233.5
CDS-3UTR CCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGAGGAGGAACATTACATaGAGCTTGATGTACAAGGTG +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLRRNIT*SLMYKV
Trigger: CACCTTGTACATCAAGCTCCATGTAATGTTCCTCCT...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGGCCTTGGAATGGCTTTaGCTTCACGAACTGAAATCA +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRALEWL*LHELKS
Trigger: TGATTTCAGTTCGTGAAGCCAAAGCCATTCCAAGGC...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGCTTGTTCACTGGAAGTaGACATGTATTCTTCTACCT +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLLVHWK*TCILLP
Trigger: AGGTAGAAGAATACATGTTCACTTCCAGTGAACAAG...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGGACAAGTCTGCATTCTaGAAGTTGAATTGTGCATCT +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLDKSAF*KLNCAS
Trigger: AGATGCACAATTCAACTTTCAGAATGCAGACTTGTC...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATAGGTCTGTATTGGACTaGCATTTCCATATGTCAGCT +
Preference number: 4 (lower is better)
Translates to: TLSKILHISSGLACGTINRSVLD*HFHMSA
Trigger: AGCTGACATATGGAAATGTCAGTCCAATACAGACCT...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACTCACTTATTTGCTGCTaGCATGTTTCAAATAACTCC +
Preference number: 4 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYSLICC*HVSNNS
Trigger: GGAGTTATTTGAAACATGTCAGCAGCAAATAAGTGA...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATTGTGGAAATAACAGCTaGATTTCTCTCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: TLSKILHISSGLACGTINCGNNS*ISLCSC
Trigger: ACAGCTGCAGAGAGAAATTCAGCTGTTATTTCCACA...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACTTTGGCTTCACGAACTaGAATCATTTGACTATTCCA +
Preference number: 4 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYFGFTN*NHLTIP
Trigger: TGGAATAGTCAAATGATTTCAGTTCGTGAAGCCAAA...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGCGTGCTTCAGTCTTCTaGTTTACTGGTTCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRRASVF*FTGSSL
Trigger: TAAGGAAGAACCAGTAAATCAGAAGACTGAAGCACG...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423041.6
CDS-3UTR GCA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATATAAATCACCATCACTaGTCCGGGTACCAAATCCAT +
Preference number: 4 (lower is better)
Translates to: TLSKILHISSGLACGTININHHH*SGYQIH
Trigger: ATGGATTTGGTACCCGGAGCAGTGATGGTGATTTAT...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR GCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGGGTGAGTATATGCCGTaGTTCAGTCTTCTGATTTAC +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRGEYMP*FSLLIY
Trigger: GTAAATCAGAAGACTGAAGCACGGCATATACTCACC...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR GCA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATGGTGAGTATATGCCGTaGTTCAGTCTTCTGATTTAC +
Preference number: 4 (lower is better)
Translates to: TLSKILHISSGLACGTINGEYMP*FSLLIY
Trigger: GTAAATCAGAAGACTGAAGCACGGCATATACTCACC...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR GCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGTATCTGATGGTGACTTaGCCACTTCTTAATCACCAG +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRYLMVT*PLLNHQ
Trigger: CTGGTGATTAAGAAGTGGGCAAGTCACCATCAGATA...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296783.7
ENST00000423041.6
CDS-3UTR GCA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGAATCATATCAAATTTCTaGTTTTCGTGCACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LTLISVSVASCHRENRAGIISNF*FSCTAL
Trigger: CAGAGCAGTGCACGAAAAGCAGAAATTTGATATGAT...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGGATAAAGGCACTATCTaGTTAACTACAGTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLDKGTI*LTTVGS
Trigger: AGAGCCAACTGTAGTTAACCAGATAGTGCCTTTATC...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACGTACAGAAGTGTTTATaGACTAAGGTGAGTATATGC +
Preference number: 4 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYVQKCL*TKVSIC
Trigger: GCATATACTCACCTTAGTCCATAAACACTTCTGTAC...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGATTAAAGTACCACGACTaGCATCATTTATCTGATGGT +
Preference number: 4 (lower is better)
Translates to: LTLISVSVASCHRENRAGLKYHD*HHLSDG
Trigger: ACCATCAGATAAATGATGCCAGTCGTGGTACTTTAA...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296783.7
ENST00000423041.6
CDS-3UTR CCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGAGGAGGAACATTACATaGAGCTTGATGTACAAGGTG +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRRRNIT*SLMYKV
Trigger: CACCTTGTACATCAAGCTCCATGTAATGTTCCTCCT...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGTTTCGTGCACTGCTCTaGCTGTATTTGTTCCATCAA +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRFRALL*LYLFHQ
Trigger: TTGATGGAACAAATACAGCCAGAGCAGTGCACGAAA...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATTTTCGTGCACTGCTCTaGCTGTATTTGTTCCATCAA +
Preference number: 4 (lower is better)
Translates to: TLSKILHISSGLACGTINFRALL*LYLFHQ
Trigger: TTGATGGAACAAATACAGCCAGAGCAGTGCACGAAA...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGCTTGTTCACTGGAAGTaGACATGTATTCTTCTACCT +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRLVHWK*TCILLP
Trigger: AGGTAGAAGAATACATGTTCACTTCCAGTGAACAAG...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATGACAAGTCTGCATTCTaGAAGTTGAATTGTGCATCT +
Preference number: 4 (lower is better)
Translates to: TLSKILHISSGLACGTINDKSAF*KLNCAS
Trigger: AGATGCACAATTCAACTTTCAGAATGCAGACTTGTC...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGGGTATGCATAAGTTCTaGGAAGGAATGTGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLGMHKF*EGMCFL
Trigger: TAAGAAACACATTCCTTCTCAGAACTTATGCATACC...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR GCA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATCTGAAAGTTGAATTGTaGATCTATAAGCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TLSKILHISSGLACGTINLKVEL*IYKLLV
Trigger: CACCAGCAGCTTATAGATGCACAATTCAACTTTCAG...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR GCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATACAAGACTATAGCTaGTTAAAGTACCACGACTGG +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRIQDYS*LKYHDW
Trigger: CCAGTCGTGGTACTTTAAGCAGCTATAGTCTTGTAT...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296783.7
ENST00000423041.6
CDS-3UTR GCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGAATTTCTGCTTTTCGTaGACTGCTCTGGCTGTATTT +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRNFCFS*TALAVF
Trigger: AAATACAGCCAGAGCAGTGCACGAAAAGCAGAAATT...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR GCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGATCATATCAAATTTCTaGTTTTCGTGCACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLIISNF*FSCTAL
Trigger: CAGAGCAGTGCACGAAAAGCAGAAATTTGATATGAT...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGGATAAAGGCACTATCTaGTTAACTACAGTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRDKGTI*LTTVGS
Trigger: AGAGCCAACTGTAGTTAACCAGATAGTGCCTTTATC...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTTCTCGAAAAGGTaGAACACATCTGACTATATC +
Preference number: 4 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYNFSKR*NTSDYI
Trigger: GATATAGTCAGATGTGTTCCACCTTTTCGAGAAATT...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGTTAAAGTACCACGACTaGCATCATTTATCTGATGGT +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLLKYHD*HHLSDG
Trigger: ACCATCAGATAAATGATGCCAGTCGTGGTACTTTAA...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296783.7
ENST00000423041.6
CDS-3UTR TCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGTCACTTATTTGCTGCTaGCATGTTTCAAATAACTCC +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRSLICC*HVSNNS
Trigger: GGAGTTATTTGAAACATGTCAGCAGCAAATAAGTGA...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGGGTATGCATAAGTTCTaGGAAGGAATGTGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRGMHKF*EGMCFL
Trigger: TAAGAAACACATTCCTTCTCAGAACTTATGCATACC...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR TCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGTTTGGCTTCACGAACTaGAATCATTTGACTATTCCA +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRFGFTN*NHLTIP
Trigger: TGGAATAGTCAAATGATTTCAGTTCGTGAAGCCAAA...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR GCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGAGCTCTAGACAAGTCTaGATTCTGAAAGTTGAATTG +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRSSRQV*ILKVEL
Trigger: CAATTCAACTTTCAGAATGCAGACTTGTCTAGAGCT...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR GCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATCATATCAAATTTCTaGTTTTCGTGCACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRIISNF*FSCTAL
Trigger: CAGAGCAGTGCACGAAAAGCAGAAATTTGATATGAT...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGAATTTCTCGAAAAGGTaGAACACATCTGACTATATC +
Preference number: 4 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLNFSKR*NTSDYI
Trigger: GATATAGTCAGATGTGTTCCACCTTTTCGAGAAATT...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGGTACAGAAGTGTTTATaGACTAAGGTGAGTATATGC +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRVQKCL*TKVSIC
Trigger: GCATATACTCACCTTAGTCCATAAACACTTCTGTAC...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR GCA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATTCGATTTTCAAGGTATaGATAAGTTCTGAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: TLSKILHISSGLACGTINSIFKV*ISSEKE
Trigger: TTCCTTCTCAGAACTTATGCATACCTTGAAAATCGA...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296783.7
ENST00000423041.6
CDS-3UTR GCA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATTCAGTATTTCATGACTaGAGTGATTTGACTGAAATG +
Preference number: 4 (lower is better)
Translates to: TLSKILHISSGLACGTINSVFHD*SDLTEM
Trigger: CATTTCAGTCAAATCACTGCAGTCATGAAATACTGA...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CCA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGAATTTCTCGAAAAGGTaGAACACATCTGACTATATC +
Preference number: 4 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRNFSKR*NTSDYI
Trigger: GATATAGTCAGATGTGTTCCACCTTTTCGAGAAATT...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS GCA 90 bp TGGTCAGGTGTCCTCCGGGAAGGGCTAAGCAGGGCCTACCCGCACTaGCCGTTCAGAAGTTCTAAGGCCCGAGCTGGGCGTACTTGGTCG +
Preference number: 5 (lower is better)
Translates to: WSGVLREGLSRAYPH*PFRSSKARAGRTWS
Trigger: CGACCAAGTACGCCCAGCTCGGGCCTTAGAACTTCTGAACGGGCAGTGCGGGTAGGCCCTGCTTAGCCCTTCCCGGAGGACACCTGACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000508620.5
ENST00000514095.5
CDS GCA 90 bp CTCACAGGTGTCCTCCGGGAAGGGCTAAGCAGGGCCTACCCGCACTaGCCGTTCAGAAGTTCTAAGGCCCGAGCTGGGCGTACTTGGTCG +
Preference number: 5 (lower is better)
Translates to: LTGVLREGLSRAYPH*PFRSSKARAGRTWS
Trigger: CGACCAAGTACGCCCAGCTCGGGCCTTAGAACTTCTGAACGGGCAGTGCGGGTAGGCCCTGCTTAGCCCTTCCCGGAGGACACCTGTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453514.6
ENST00000502269.1
ENST00000504233.5
CDS CCA 90 bp CCCTTTGAAACACCATGCAAGGGTCCCAAGACTATCTTCCTCTTTTaGTCCTGGAGTGGTGGACGAGGCAGTACGCGAGGAATAGAAAAC +
Preference number: 5 (lower is better)
Translates to: PFETPCKGPKTIFLF*SWSGGRGSTRGIEN
Trigger: GTTTTCTATTCCTCGCGTACTGCCTCGTCCACCACTCCAGGACCAAAAGAGGAAGATAGTCTTGGGACCCTTGCATGGTGTTTCAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000453514.6
ENST00000502269.1
ENST00000504233.5
CDS CCA 90 bp ACCATGCAAGGGTCCCAAGACTATCTTCCTCTTTTGGTCCTGGAGTaGTGGACGAGGCAGTACGCGAGGAATAGAAAACGAGTAAGCAAA +
Preference number: 5 (lower is better)
Translates to: TMQGSQDYLPLLVLE*WTRQYARNRKRVSK
Trigger: TTTGCTTACTCGTTTTCTATTCCTCGCGTACTGCCTCGTCCACCACTCCAGGACCAAAAGAGGAAGATAGTCTTGGGACCCTTGCATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000453514.6
ENST00000502269.1
ENST00000504233.5
CDS CCA 90 bp ATGCAAGGGTCCCAAGACTATCTTCCTCTTTTGGTCCTGGAGTGGTaGACGAGGCAGTACGCGAGGAATAGAAAACGAGTAAGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: MQGSQDYLPLLVLEW*TRQYARNRKRVSKV
Trigger: TACTTTGCTTACTCGTTTTCTATTCCTCGCGTACTGCCTCGTCCACCACTCCAGGACCAAAAGAGGAAGATAGTCTTGGGACCCTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000453514.6
ENST00000502269.1
ENST00000504233.5
CDS GCA 90 bp AGCAGCCCAGATGCCGCCCATAAATTTGGAATAACCAAGAGATACTaGTGGAACCTCCCACGCAAAACAAAACGCTACCGTTTCGGAAAA +
Preference number: 5 (lower is better)
Translates to: SSPDAAHKFGITKRY*WNLPRKTKRYRFGK
Trigger: TTTTCCGAAACGGTAGCGTTTTGTTTTGCGTGGGAGGTTCCAGCAGTATCTCTTGGTTATTCCAAATTTATGGGCGGCATCTGGGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000453514.6
ENST00000502269.1
ENST00000504233.5
CDS CCA 90 bp CAAGTCAAACTCCACACAACTGACTTTATCCCTGAACTTCACAATTaGCACTTTTGCTCGAATCAGCTGAGGTCTCTCAATGTAGCCCGC +
Preference number: 5 (lower is better)
Translates to: QVKLHTTDFIPELHN*HFCSNQLRSLNVAR
Trigger: GCGGGCTACATTGAGAGACCTCAGCTGATTCGAGCAAAAGTGCCAATTGTGAAGTTCAGGGATAAAGTCAGTTGTGTGGAGTTTGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509227.1
CDS GCA 90 bp CTCCACACAACTGACTTTATCCCTGAACTTCACAATTGGCACTTTTaGTCGAATCAGCTGAGGTCTCTCAATGTAGCCCGAAAGTCTAGT +
Preference number: 5 (lower is better)
Translates to: LHTTDFIPELHNWHF*SNQLRSLNVARKSS
Trigger: ACTAGACTTTCGGGCTACATTGAGAGACCTCAGCTGATTCGAGCAAAAGTGCCAATTGTGAAGTTCAGGGATAAAGTCAGTTGTGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000428308.6
ENST00000453514.6
ENST00000504233.5
CDS CCA 90 bp AATGGTGGCATTGAGTATCTTCGTTCACCTGATAAAGGCACTATCTaGTTAACTACAGTTGGCTCTTGGTGGGGTGAATGGAAACGTTGC +
Preference number: 5 (lower is better)
Translates to: NGGIEYLRSPDKGTI*LTTVGSWWGEWKRC
Trigger: GCAACGTTTCCATTCACCCCACCAAGAGCCAACTGTAGTTAACCAGATAGTGCCTTTATCAGGTGAACGAAGATACTCAATGCCACCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000428308.6
ENST00000453514.6
ENST00000504233.5
ENST00000505571.5
CDS CCA 90 bp CAAGTCAAACTCCACACAACTGACTTTATCCCTGAACTTCACAATTaGCACTTTTGCTCGAATCAGCTGAGGTCTCTCAATGTAGCCCGA +
Preference number: 5 (lower is better)
Translates to: QVKLHTTDFIPELHN*HFCSNQLRSLNVAR
Trigger: TCGGGCTACATTGAGAGACCTCAGCTGATTCGAGCAAAAGTGCCAATTGTGAAGTTCAGGGATAAAGTCAGTTGTGTGGAGTTTGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000428308.6
ENST00000453514.6
ENST00000504233.5
CDS CCA 90 bp CGTAACCATGTAGGATTTGTGAATTCAACCAGGATGAAAAATATTTaGGAGGGGGTAGGGAGGAGGCAGAATGGTTGCATCTGTACCGAA +
Preference number: 5 (lower is better)
Translates to: RNHVGFVNSTRMKNI*EGVGRRQNGCICTE
Trigger: TTCGGTACAGATGCAACCATTCTGCCTCCTCCCTACCCCCTCCCAAATATTTTTCATCCTGGTTGAATTCACAAATCCTACATGGTTACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000453514.6
CDS-3UTR CAA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATCCGAGCTGGGCGTACTaGGTCGTAGCTTTCTCCCGA +
Preference number: 5 (lower is better)
Translates to: TLSKILHISSGLACGTINPSWAY*VVAFSR
Trigger: TCGGGAGAAAGCTACGACCAAGTACGCCCAGCTCGG...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGCCGAGCTGGGCGTACTaGGTCGTAGCTTTCTCCCGA +
Preference number: 5 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRPSWAY*VVAFSR
Trigger: TCGGGAGAAAGCTACGACCAAGTACGCCCAGCTCGG...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACGACTATCTTCCTCTTTaGGTCCCGCACTGCCCGTTC +
Preference number: 5 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYDYLPL*VPHCPF
Trigger: GAACGGGCAGTGCGGGACCAAAAGAGGAAGATAGTC...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423041.6
CDS-3UTR CAA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGAGACTATCTTCCTCTTTaGGTCAGGTGTCCTCCGGGA +
Preference number: 5 (lower is better)
Translates to: LTLISVSVASCHRENRAGDYLPL*VRCPPG
Trigger: TCCCGGAGGACACCTGACCAAAAGAGGAAGATAGTC...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296783.7
CDS-3UTR CAA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGACAAGGATATAGAAGGTaGGGGGCGGTGGCAAAAAGC +
Preference number: 5 (lower is better)
Translates to: LTLISVSVASCHRENRAGQGYRR*GAVAKS
Trigger: GCTTTTTGCCACCGCCCCCAACCTTCTATATCCTTG...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGAGTTCTTCACCACCCTTaGAAACACCATGCAAGGGTC +
Preference number: 5 (lower is better)
Translates to: LTLISVSVASCHRENRAGVLHHP*KHHARV
Trigger: GACCCTTGCATGGTGTTTCAAAGGGTGGTGAAGAAC...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACGTGGGCGACCCAAAATaGAGTTTGGGAACATGCTCT +
Preference number: 5 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYVGDPK*SLGTCS
Trigger: AGAGCATGTTCCCAAACTCAATTTTGGGTCGCCCAC...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACGGCCTTGGAATGGCTTaGGCTTCACGAACTGAAATC +
Preference number: 5 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYGLGMA*ASRTEI
Trigger: GATTTCAGTTCGTGAAGCCAAAGCCATTCCAAGGCC...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGAGGCCTTGGAATGGCTTaGGCTTCACGAACTGAAATC +
Preference number: 5 (lower is better)
Translates to: LTLISVSVASCHRENRAGGLGMA*ASRTEI
Trigger: GATTTCAGTTCGTGAAGCCAAAGCCATTCCAAGGCC...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGGTTCTTCACCACCCTTaGAAACACCATGCAAGGGTC +
Preference number: 5 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLVLHHP*KHHARV
Trigger: GACCCTTGCATGGTGTTTCAAAGGGTGGTGAAGAAC...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGACTCTGGGTAAATTTTTaGGAGGGATGGAAGGATGGG +
Preference number: 5 (lower is better)
Translates to: LTLISVSVASCHRENRAGLWVNF*EGWKDG
Trigger: CCCATCCTTCCATCCCTCCAAAAAATTTACCCAGAG...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGCAAGGATATAGAAGGTaGGGGGCGGTGGCAAAAAGC +
Preference number: 5 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRQGYRR*GAVAKS
Trigger: GCTTTTTGCCACCGCCCCCAACCTTCTATATCCTTG...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATGACTATCTTCCTCTTTaGGTCCTGGAGTGGTGGACG +
Preference number: 5 (lower is better)
Translates to: TLSKILHISSGLACGTINDYLPL*VLEWWT
Trigger: CGTCCACCACTCCAGGACCAAAAGAGGAAGATAGTC...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504233.5
CDS-3UTR CAA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACGAAACAATGGTGGCATaGAGTATCTTCGTTCACCTG +
Preference number: 5 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYETMVA*SIFVHL
Trigger: CAGGTGAACGAAGATACTCAATGCCACCATTGTTTC...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGCTCTGGGTAAATTTTTaGGAGGGATGGAAGGATGGG +
Preference number: 5 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLLWVNF*EGWKDG
Trigger: CCCATCCTTCCATCCCTCCAAAAAATTTACCCAGAG...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAGAGGTCCCCAAGGTTaGATTCATTCTTTGAGAGGT +
Preference number: 5 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYRGPQG*IHSLRG
Trigger: ACCTCTCAAAGAATGAATCAAACCTTGGGGACCTCT...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGGGCCTTGGAATGGCTTaGGCTTCACGAACTGAAATC +
Preference number: 5 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRGLGMA*ASRTEI
Trigger: GATTTCAGTTCGTGAAGCCAAAGCCATTCCAAGGCC...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGAGACCCAAAATTGAGTTaGGGAACATGCTCTTGTTCA +
Preference number: 5 (lower is better)
Translates to: LTLISVSVASCHRENRAGDPKLS*GTCSCS
Trigger: TGAACAAGAGCATGTTCCCAAACTCAATTTTGGGTC...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACGACCCAAAATTGAGTTaGGGAACATGCTCTTGTTCA +
Preference number: 5 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYDPKLS*GTCSCS
Trigger: TGAACAAGAGCATGTTCCCAAACTCAATTTTGGGTC...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATTCACAATTGGCACTTTaGCTCGAATCAGCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: TLSKILHISSGLACGTINSQLAL*LESAEV
Trigger: GACCTCAGCTGATTCGAGCAAAAGTGCCAATTGTGA...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGTCACAATTGGCACTTTaGCTCGAATCAGCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRSQLAL*LESAEV
Trigger: GACCTCAGCTGATTCGAGCAAAAGTGCCAATTGTGA...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGAGAGGTCCCCAAGGTTaGATTCATTCTTTGAGAGGT +
Preference number: 5 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLRGPQG*IHSLRG
Trigger: ACCTCTCAAAGAATGAATCAAACCTTGGGGACCTCT...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS TCA 90 bp GTATTTGGTCCTGGAATTTGCAACCTGGAATTTCTGTCCTCAACTTaGCCTCTCCTCCAACAAATTAGAGAACACTCAAGGTTATATATA +
Preference number: 5 (lower is better)
Translates to: VFGPGICNLEFLSST*PLLQQIREHSRLYI
Trigger: TATATATAACCTTGAGTGTTCTCTAATTTGTTGGAGGAGAGGTCAAGTTGAGGACAGAAATTCCAGGTTGCAAATTCCAGGACCAAATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502269.1
CDS CCA 90 bp CACAGATGTATTTATTTCTCCATTCAATACCATCAGGCCTTGGAATaGCTTTGGCTTCACGAACTGAAATCATTTGACTATTCCAGTCAA +
Preference number: 5 (lower is better)
Translates to: HRCIYFSIQYHQALE*LWLHELKSFDYSSQ
Trigger: TTGACTGGAATAGTCAAATGATTTCAGTTCGTGAAGCCAAAGCCATTCCAAGGCCTGATGGTATTGAATGGAGAAATAAATACATCTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000428308.6
ENST00000453514.6
ENST00000504233.5
ENST00000510721.1
ENST00000513735.5
ENST00000515298.5
CDS-3UTR CAA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGTTTGGGAACATGCTCTaGTTCACTGGAAGTGAACAT +
Preference number: 5 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLFGNML*FTGSEH
Trigger: ATGTTCACTTCCAGTGAACAAGAGCATGTTCCCAAA...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGGACCCAAAATTGAGTTaGGGAACATGCTCTTGTTCA +
Preference number: 5 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLDPKLS*GTCSCS
Trigger: TGAACAAGAGCATGTTCCCAAACTCAATTTTGGGTC...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATGAAACAATGGTGGCATaGAGTATCTTCGTTCACCTG +
Preference number: 5 (lower is better)
Translates to: TLSKILHISSGLACGTINETMVA*SIFVHL
Trigger: CAGGTGAACGAAGATACTCAATGCCACCATTGTTTC...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGGAAACAATGGTGGCATaGAGTATCTTCGTTCACCTG +
Preference number: 5 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRETMVA*SIFVHL
Trigger: CAGGTGAACGAAGATACTCAATGCCACCATTGTTTC...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATAACATTACATGGAGCTaGATGTACAAGGTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: TLSKILHISSGLACGTINNITWS*MYKVQL
Trigger: CAGCTGCACCTTGTACATCAAGCTCCATGTAATGTT...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGAACATTACATGGAGCTaGATGTACAAGGTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRNITWS*MYKVQL
Trigger: CAGCTGCACCTTGTACATCAAGCTCCATGTAATGTT...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp GAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACGGTTTGATTCATTCTTaGAGAGGTAAGGAGGAACAT +
Preference number: 5 (lower is better)
Translates to: ELDPFQNSTHLFRISMWYGLIHS*RGKEEH
Trigger: ATGTTCCTCCTTACCTCTCAAAGAATGAATCAAACC...GTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGAGGTTTGATTCATTCTTaGAGAGGTAAGGAGGAACAT +
Preference number: 5 (lower is better)
Translates to: LTLISVSVASCHRENRAGGLIHS*RGKEEH
Trigger: ATGTTCCTCCTTACCTCTCAAAGAATGAATCAAACC...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGAGAGGTCCCCAAGGTTaGATTCATTCTTTGAGAGGT +
Preference number: 5 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRRGPQG*IHSLRG
Trigger: ACCTCTCAAAGAATGAATCAAACCTTGGGGACCTCT...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGCTGCTCTGGCTGTATTaGTTCCATCAAAAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLLLWLY*FHQKVL
Trigger: AAGAACCTTTTGATGGAACAAATACAGCCAGAGCAG...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS TCA 90 bp CCATTCAATACCATCAGGCCTTGGAATGGCTTTGGCTTCACGAACTaGAATCATTTGACTATTCCAGTCAAATTCTGTAGCATAATATTT +
Preference number: 5 (lower is better)
Translates to: PFNTIRPWNGFGFTN*NHLTIPVKFCSIIF
Trigger: AAATATTATGCTACAGAATTTGACTGGAATAGTCAAATGATTTCAGTTCGTGAAGCCAAAGCCATTCCAAGGCCTGATGGTATTGAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000428308.6
ENST00000453514.6
ENST00000504233.5
ENST00000510721.1
ENST00000513735.5
ENST00000515298.5
CDS CCA 90 bp TGTATTTATTTCTCCATTCAATACCATCAGGCCTTGGAATGGCTTTaGCTTCACGAACTGAAATCATTTGACTATTCCAGTCAAATTCTG +
Preference number: 5 (lower is better)
Translates to: CIYFSIQYHQALEWL*LHELKSFDYSSQIL
Trigger: CAGAATTTGACTGGAATAGTCAAATGATTTCAGTTCGTGAAGCCAAAGCCATTCCAAGGCCTGATGGTATTGAATGGAGAAATAAATACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000428308.6
ENST00000453514.6
ENST00000504233.5
ENST00000510721.1
ENST00000513735.5
ENST00000515298.5
CDS-3UTR CAA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGTTTGGGAACATGCTCTaGTTCACTGGAAGTGAACAT +
Preference number: 5 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRFGNML*FTGSEH
Trigger: ATGTTCACTTCCAGTGAACAAGAGCATGTTCCCAAA...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGAGAAGTTATTATGTTGTaGATGATTTGGAGTGAAGGG +
Preference number: 5 (lower is better)
Translates to: LTLISVSVASCHRENRAGEVIML*MIWSEG
Trigger: CCCTTCACTCCAAATCATCAACAACATAATAACTTC...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATCTGCTCTGGCTGTATTaGTTCCATCAAAAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: TLSKILHISSGLACGTINLLWLY*FHQKVL
Trigger: AAGAACCTTTTGATGGAACAAATACAGCCAGAGCAG...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp TTAACTTTGATCTCAGTTTCTGTTGCTTCATGTCACAGAGAAAACAGAGCAGGACTGTTCAAATCTCTCTaGTTTTTCAATCTGTGCCAT +
Preference number: 5 (lower is better)
Translates to: LTLISVSVASCHRENRAGLFKSL*FFNLCH
Trigger: ATGGCACAGATTGAAAAACAAGAGAGATTTGAACAG...TCCTGCTCTGTTTTCTCTGTGACATGAAGCAACAGAAACTGAGATCAAAGTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGGGTTTGATTCATTCTTaGAGAGGTAAGGAGGAACAT +
Preference number: 5 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRGLIHS*RGKEEH
Trigger: ATGTTCCTCCTTACCTCTCAAAGAATGAATCAAACC...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp CTAACTGTTGTAAGAGTTAGTGCTCCCATTACTACAGTGCAAAATGTATTGTTGCATGACTGCAGTGATTaGACTGAAATGAAAGATTTC +
Preference number: 5 (lower is better)
Translates to: LTVVRVSAPITTVQNVLLHDCSD*TEMKDF
Trigger: GAAATCTTTCATTTCAGTCAAATCACTGCAGTCATG...CAACAATACATTTTGCACTGTAGTAATGGGAGCACTAACTCTTACAACAGTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS TCA 90 bp TACTATGAACTGCCTAATAAGGTAGATAGAATTCAAGGGAGAGGGTaGTCAAAAATGAAAGTCATCAGCATAGGTGTGTTAAGTCTAAAT +
Preference number: 5 (lower is better)
Translates to: YYELPNKVDRIQGRG*SKMKVISIGVLSLN
Trigger: ATTTAGACTTAACACACCTATGCTGATGACTTTCATTTTTGATCACCCTCTCCCTTGAATTCTATCTACCTTATTAGGCAGTTCATAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505770.1
CDS-3UTR CAA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGGAAGTTATTATGTTGTaGATGATTTGGAGTGAAGGG +
Preference number: 5 (lower is better)
Translates to: TLSMYELDPFQNSTHLFREVIML*MIWSEG
Trigger: CCCTTCACTCCAAATCATCAACAACATAATAACTTC...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATGAAGTTATTATGTTGTaGATGATTTGGAGTGAAGGG +
Preference number: 5 (lower is better)
Translates to: TLSKILHISSGLACGTINEVIML*MIWSEG
Trigger: CCCTTCACTCCAAATCATCAACAACATAATAACTTC...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp ACCCTTTCCAAAATTCTACACATCTCTTCAGGATTAGCATGTGGTACAATTAATCTGTTCAAATCTCTCTaGTTTTTCAATCTGTGCCAT +
Preference number: 5 (lower is better)
Translates to: TLSKILHISSGLACGTINLFKSL*FFNLCH
Trigger: ATGGCACAGATTGAAAAACAAGAGAGATTTGAACAG...ATTAATTGTACCACATGCTAATCCTGAAGAGATGTGTAGAATTTTGGAAAGGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGCTGTTCAAATCTCTCTaGTTTTTCAATCTGTGCCAT +
Preference number: 5 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRLFKSL*FFNLCH
Trigger: ATGGCACAGATTGAAAAACAAGAGAGATTTGAACAG...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS-3UTR CAA 90 bp ACTTTAAGCATGTATGAATTAGACCCTTTCCAAAATTCTACACATCTCTTCAGGCATGACTGCAGTGATTaGACTGAAATGAAAGATTTC +
Preference number: 5 (lower is better)
Translates to: TLSMYELDPFQNSTHLFRHDCSD*TEMKDF
Trigger: GAAATCTTTCATTTCAGTCAAATCACTGCAGTCATG...CCTGAAGAGATGTGTAGAATTTTGGAAAGGGTCTAATTCATACATGCTTAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000504233.5
CDS GCA 72 bp GTCCTCCGGGAAGGGCTAAGCAGGGCCTACCCGCACTaGCCGTTCAGAAGTTCTAAGGCCCGAGCTGGGCGT +
Preference number: 6 (lower is better)
Translates to: VLREGLSRAYPH*PFRSSKARAGR
Trigger: ACGCCCAGCTCGGGCCTTAGAACTTCTGAACGGGCAGTGCGGGTAGGCCCTGCTTAGCCCTTCCCGGAGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296783.7
ENST00000453514.6
ENST00000502269.1
ENST00000504233.5
ENST00000508620.5
ENST00000514095.5
CDS CCA 72 bp CGTTTCGGAAAAGTTTCCCGTGCCCCGCCGCCGACCTaGGCCTACACTGCTGCGTTCCTCTCCGAAACCCCC +
Preference number: 6 (lower is better)
Translates to: RFGKVSRAPPPT*AYTAAFLSETP
Trigger: GGGGGTTTCGGAGAGGAACGCAGCAGTGTAGGCCCAGGTCGGCGGCGGGGCACGGGAAACTTTTCCGAAACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000453514.6
ENST00000502269.1
ENST00000504233.5
CDS CCA 72 bp ACACCATGCAAGGGTCCCAAGACTATCTTCCTCTTTTaGTCCTGGAGTGGTGGACGAGGCAGTACGCGAGGA +
Preference number: 6 (lower is better)
Translates to: TPCKGPKTIFLF*SWSGGRGSTRG
Trigger: TCCTCGCGTACTGCCTCGTCCACCACTCCAGGACCAAAAGAGGAAGATAGTCTTGGGACCCTTGCATGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453514.6
ENST00000502269.1
ENST00000504233.5
CDS CCA 72 bp GGGTCCCAAGACTATCTTCCTCTTTTGGTCCTGGAGTaGTGGACGAGGCAGTACGCGAGGAATAGAAAACGA +
Preference number: 6 (lower is better)
Translates to: GSQDYLPLLVLE*WTRQYARNRKR
Trigger: TCGTTTTCTATTCCTCGCGTACTGCCTCGTCCACCACTCCAGGACCAAAAGAGGAAGATAGTCTTGGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000453514.6
ENST00000502269.1
ENST00000504233.5
CDS CCA 72 bp TCCCAAGACTATCTTCCTCTTTTGGTCCTGGAGTGGTaGACGAGGCAGTACGCGAGGAATAGAAAACGAGTA +
Preference number: 6 (lower is better)
Translates to: SQDYLPLLVLEW*TRQYARNRKRV
Trigger: TACTCGTTTTCTATTCCTCGCGTACTGCCTCGTCCACCACTCCAGGACCAAAAGAGGAAGATAGTCTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000453514.6
ENST00000502269.1
ENST00000504233.5
CDS CAA 72 bp ATCAAGCTCTGGAGCCCCTTAGTTCTTCACCACCCTTaGAAACACCATGCAAGGGTCCCAAGACTATCTTCC +
Preference number: 6 (lower is better)
Translates to: IKLWSPLVLHHP*KHHARVPRLSS
Trigger: GGAAGATAGTCTTGGGACCCTTGCATGGTGTTTCAAAGGGTGGTGAAGAACTAAGGGGCTCCAGAGCTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428308.6
CDS TCA 72 bp CACTATCTGGTTAACTACAGTTGGCTCTTGGTGGGGTaGATGGAAACGTTGCCGTTTACCGTCAAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: HYLVNYSWLLVG*METLPFTVKRK
Trigger: CTTCCTCTTGACGGTAAACGGCAACGTTTCCATTCACCCCACCAAGAGCCAACTGTAGTTAACCAGATAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000428308.6
ENST00000453514.6
ENST00000504233.5
ENST00000505571.5
CDS GCA 72 bp GATGCCGCCCATAAATTTGGAATAACCAAGAGATACTaGTGGAACCTCCCACGCAAAACAAAACGCTACCGT +
Preference number: 6 (lower is better)
Translates to: DAAHKFGITKRY*WNLPRKTKRYR
Trigger: ACGGTAGCGTTTTGTTTTGCGTGGGAGGTTCCAGCAGTATCTCTTGGTTATTCCAAATTTATGGGCGGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000453514.6
ENST00000502269.1
ENST00000504233.5
CDS GCA 72 bp ACTGACTTTATCCCTGAACTTCACAATTGGCACTTTTaGTCGAATCAGCTGAGGTCTCTCAATGTAGCCCGC +
Preference number: 6 (lower is better)
Translates to: TDFIPELHNWHF*SNQLRSLNVAR
Trigger: GCGGGCTACATTGAGAGACCTCAGCTGATTCGAGCAAAAGTGCCAATTGTGAAGTTCAGGGATAAAGTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509227.1
CDS CCA 72 bp ATCTGGTTAACTACAGTTGGCTCTTGGTGGGGTGAATaGAAACGTTGCCGTTTACCGTCAAGAGGAAGGTTT +
Preference number: 6 (lower is better)
Translates to: IWLTTVGSWWGE*KRCRLPSRGRF
Trigger: AAACCTTCCTCTTGACGGTAAACGGCAACGTTTCCATTCACCCCACCAAGAGCCAACTGTAGTTAACCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000428308.6
ENST00000453514.6
ENST00000504233.5
ENST00000505571.5
CDS GCA 72 bp ACTGACTTTATCCCTGAACTTCACAATTGGCACTTTTaGTCGAATCAGCTGAGGTCTCTCAATGTAGCCCGA +
Preference number: 6 (lower is better)
Translates to: TDFIPELHNWHF*SNQLRSLNVAR
Trigger: TCGGGCTACATTGAGAGACCTCAGCTGATTCGAGCAAAAGTGCCAATTGTGAAGTTCAGGGATAAAGTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000428308.6
ENST00000453514.6
ENST00000504233.5
CDS CAA 72 bp AGTATCTGTGGATTTTGGTATCTGAAGAGGACGGGGTaGACCTGGAATCAATCCCTCAATATACTGAGGGAC +
Preference number: 6 (lower is better)
Translates to: SICGFWYLKRTG*TWNQSLNILRD
Trigger: GTCCCTCAGTATATTGAGGGATTGATTCCAGGTCAACCCCGTCCTCTTCAGATACCAAAATCCACAGATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453514.6
CDS TCA 72 bp CTCGAAATAATGGGGAAGCTGAGGTCTGTATTGGACTaGCATTTCCATATGTCAGCTGCTGTAATGACACAG +
Preference number: 6 (lower is better)
Translates to: LEIMGKLRSVLD*HFHMSAAVMTQ
Trigger: CTGTGTCATTACAGCAGCTGACATATGGAAATGTCAGTCCAATACAGACCTCAGCTTCCCCATTATTTCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000428308.6
ENST00000453514.6
ENST00000503620.1
ENST00000504233.5
ENST00000505571.5
ENST00000514095.5
ENST00000515807.5
CDS CCA 72 bp ATTGAGTATCTTCGTTCACCTGATAAAGGCACTATCTaGTTAACTACAGTTGGCTCTTGGTGGGGTGAATGG +
Preference number: 6 (lower is better)
Translates to: IEYLRSPDKGTI*LTTVGSWWGEW
Trigger: CCATTCACCCCACCAAGAGCCAACTGTAGTTAACCAGATAGTGCCTTTATCAGGTGAACGAAGATACTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000428308.6
ENST00000453514.6
ENST00000504233.5
ENST00000505571.5
CDS CCA 72 bp ACTGTAAGCTGGGGATTATTCACCAGTTACACGAGCTaGTATGCATGCATTATGTCTGGAGGTAATGAACTG +
Preference number: 6 (lower is better)
Translates to: TVSWGLFTSYTS*YACIMSGGNEL
Trigger: CAGTTCATTACCTCCAGACATAATGCATGCATACCAGCTCGTGTAACTGGTGAATAATCCCCAGCTTACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453514.6
CDS CAA 72 bp AGCCCAGTAAGAGGTCCCCAAGGTTTGATTCATTCTTaGAGAGGTAAGGAGGAACATTACATGGAGCTTGAT +
Preference number: 6 (lower is better)
Translates to: SPVRGPQGLIHS*RGKEEHYMELD
Trigger: ATCAAGCTCCATGTAATGTTCCTCCTTACCTCTCAAAGAATGAATCAAACCTTGGGGACCTCTTACTGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000428308.6
ENST00000453514.6
ENST00000504233.5
ENST00000504982.1
ENST00000510721.1
ENST00000513735.5
ENST00000515298.5
CDS CAA 90 bp AGGGACTTGAGTATCTGTGGATTTTGGTATCTGAAGAGGACGGGGTaGACCTGGAATCAATCCCTCAATATACTGAGGGACAACTATATA +
Preference number: 6 (lower is better)
Translates to: RDLSICGFWYLKRTG*TWNQSLNILRDNYI
Trigger: TATATAGTTGTCCCTCAGTATATTGAGGGATTGATTCCAGGTCAACCCCGTCCTCTTCAGATACCAAAATCCACAGATACTCAAGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453514.6
CDS CCA 72 bp TGTGTGGAAATGCTTTGCAACATGATACACGGGGCTTaGATGCATTCGATAAGTGTGATCTCTATGAGTGAA +
Preference number: 6 (lower is better)
Translates to: CVEMLCNMIHGA*MHSISVISMSE
Trigger: TTCACTCATAGAGATCACACTTATCGAATGCATCCAAGCCCCGTGTATCATGTTGCAAAGCATTTCCACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509227.1
CDS CAA 72 bp AACATGTATTCTTCTACCTTAGTTCTTCACCACCCTTaGAAACACCATGCAAGGGTCCCAAGACTATCTTCC +
Preference number: 6 (lower is better)
Translates to: NMYSSTLVLHHP*KHHARVPRLSS
Trigger: GGAAGATAGTCTTGGGACCCTTGCATGGTGTTTCAAAGGGTGGTGAAGAACTAAGGTAGAAGAATACATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000453514.6
ENST00000504233.5
ENST00000505571.5
ENST00000514095.5
ENST00000515807.5
CDS GCA 72 bp GATGGGAAGCTAACAGTTCAAATTAGAATGGGAGGATaGAGGGCTTCAAGAAGATATCTTAGTTCTTCACCA +
Preference number: 6 (lower is better)
Translates to: DGKLTVQIRMGG*RASRRYLSSSP
Trigger: TGGTGAAGAACTAAGATATCTTCTTGAAGCCCTGCATCCTCCCATTCTAATTTGAACTGTTAGCTTCCCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503620.1
ENST00000508620.5
CDS CCA 72 bp TTCTCCATTCAATACCATCAGGCCTTGGAATGGCTTTaGCTTCACGAACTGAAATCATTTGACTATTCCAGT +
Preference number: 6 (lower is better)
Translates to: FSIQYHQALEWL*LHELKSFDYSS
Trigger: ACTGGAATAGTCAAATGATTTCAGTTCGTGAAGCCAAAGCCATTCCAAGGCCTGATGGTATTGAATGGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000428308.6
ENST00000453514.6
ENST00000504233.5
ENST00000510721.1
ENST00000513735.5
ENST00000515298.5
CDS TCA 72 bp GAAGGATGGGTTCAGGTAGGGGGTATGCATAAGTTCTaGGAAGGAATGTGTTTCTTATTCCAACAATATTGT +
Preference number: 6 (lower is better)
Translates to: EGWVQVGGMHKF*EGMCFLFQQYC
Trigger: ACAATATTGTTGGAATAAGAAACACATTCCTTCTCAGAACTTATGCATACCCCCTACCTGAACCCATCCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504233.5
CDS CAA 90 bp CTTCTACACAGATGTATTTATTTCTCCATTCAATACCATCAGGCCTaGGAATGGCTTTGGCTTCACGAACTGAAATCATTTGACTATTCC +
Preference number: 6 (lower is better)
Translates to: LLHRCIYFSIQYHQA*EWLWLHELKSFDYS
Trigger: GGAATAGTCAAATGATTTCAGTTCGTGAAGCCAAAGCCATTCCAAGGCCTGATGGTATTGAATGGAGAAATAAATACATCTGTGTAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000428308.6
ENST00000453514.6
ENST00000504233.5
ENST00000510721.1
ENST00000515298.5
CDS TCA 72 bp CTGCCTAATAAGGTAGATAGAATTCAAGGGAGAGGGTaGTCAAAAATGAAAGTCATCAGCATAGGTGTGTTA +
Preference number: 6 (lower is better)
Translates to: LPNKVDRIQGRG*SKMKVISIGVL
Trigger: TAACACACCTATGCTGATGACTTTCATTTTTGATCACCCTCTCCCTTGAATTCTATCTACCTTATTAGGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505770.1
CDS CAA 72 bp CAAATTTCTGCTTTTCGTGCACTGCTCTGGCTGTATTaGTTCCATCAAAAGGTTCTTCTACACAGATGTATT +
Preference number: 6 (lower is better)
Translates to: QISAFRALLWLY*FHQKVLLHRCI
Trigger: AATACATCTGTGTAGAAGAACCTTTTGATGGAACAAATACAGCCAGAGCAGTGCACGAAAAGCAGAAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000428308.6
ENST00000453514.6
ENST00000504233.5
ENST00000510721.1
ENST00000515298.5
CDS CAA 72 bp CATGCATTATGTCTGGAGGTAATGAACTGTAAATCATaGAATTACAGTACAGATACATCAGCTAGTGGGGCA +
Preference number: 6 (lower is better)
Translates to: HALCLEVMNCKS*NYSTDTSASGA
Trigger: TGCCCCACTAGCTGATGTATCTGTACTGTAATTCAATGATTTACAGTTCATTACCTCCAGACATAATGCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453514.6
CDS CCA 72 bp ATTTATTTCTCCATTCAATACCATCAGGCCTTGGAATaGCTTTGGCTTCACGAACTGAAATCATTTGACTAT +
Preference number: 6 (lower is better)
Translates to: IYFSIQYHQALE*LWLHELKSFDY
Trigger: ATAGTCAAATGATTTCAGTTCGTGAAGCCAAAGCCATTCCAAGGCCTGATGGTATTGAATGGAGAAATAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000428308.6
ENST00000453514.6
ENST00000504233.5
ENST00000510721.1
ENST00000513735.5
ENST00000515298.5
CDS CAA 72 bp TATCTGGTACATAATGTGTATGAAACAATGGTGGCATaGAGTATCTTCGTTCACCTGATAAAGGCACTATCT +
Preference number: 6 (lower is better)
Translates to: YLVHNVYETMVA*SIFVHLIKALS
Trigger: AGATAGTGCCTTTATCAGGTGAACGAAGATACTCAATGCCACCATTGTTTCATACACATTATGTACCAGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000428308.6
ENST00000453514.6
ENST00000504233.5
ENST00000505571.5
CDS TCA 72 bp ACGGACGAACTCGATTTTCAAGGTATGCATAAGTTCTaGGAAGGAATGTGTTTCTTATTCCAACAATATTGT +
Preference number: 6 (lower is better)
Translates to: TDELDFQGMHKF*EGMCFLFQQYC
Trigger: ACAATATTGTTGGAATAAGAAACACATTCCTTCTCAGAACTTATGCATACCTTGAAAATCGAGTTCGTCCGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296783.7
ENST00000423041.6
ENST00000428308.6
ENST00000453514.6
CDS CAA 72 bp GAATGGTTGCATCTGTACCGAACAGGTATAGACTTTTaGTCTTGTCATTATTATTCCCTAAACAATACAGTA +
Preference number: 6 (lower is better)
Translates to: EWLHLYRTGIDF*SCHYYSLNNTV
Trigger: TACTGTATTGTTTAGGGAATAATAATGACAAGACAAAAAGTCTATACCTGTTCGGTACAGATGCAACCATTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453514.6
CDS CAA 72 bp GGCAAAACTAAAATCTACATTATTATTACCTTATCTTaGGCCTCAGGCAGTGTGATTTCTCTAGGTTCTAAA +
Preference number: 6 (lower is better)
Translates to: GKTKIYIIITLS*ASGSVISLGSK
Trigger: TTTAGAACCTAGAGAAATCACACTGCCTGAGGCCAAAGATAAGGTAATAATAATGTAGATTTTAGTTTTGCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505571.5