RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TENM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000145934

Ensembl transcript IDs: ENST00000517586.1, ENST00000517941.1, ENST00000518659.5, ENST00000518693.1, ENST00000519204.5, ENST00000520393.5, ENST00000520394.5, ENST00000521126.1, ENST00000522488.1

Found 1255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAAGTATTTGTCCTACAAGCAGTCTGAGTGGTTTGTCCCGCAGCTaGTCTGGTGACGCTGGCCCTCGCGGATGTCTGCGTGTCGCTCAC +
Preference number: 1 (lower is better)
Translates to: RSICPTSSLSGLSRS*SGDAGPRGCLRVAH
Trigger: GTGAGCGACACGCAGACATCCGCGAGGGCCAGCGTCACCAGACCAGCTGCGGGACAAACCACTCAGACTGCTTGTAGGACAAATACTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
3UTR GCA 90 bp CAGGGTGATCAGAAGTGGTACCTGTTAGCAAAAGTGTCACGATGCTaGACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAAC +
Preference number: 1 (lower is better)
Translates to: QGDQKWYLLAKVSRC*TSTETDTHELRNLN
Trigger: GTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGTGCAGCATCGTGACACTTTTGCTAACAGGTACCACTTCTGATCACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
3UTR GCA 90 bp GTACAGGGTGATCAGAAGTGGTACCTGTTAGCAAAAGTGTCACGATaGTGCACCTCTACCGAAACTGATACCCACGAACTACGGAATCTA +
Preference number: 1 (lower is better)
Translates to: VQGDQKWYLLAKVSR*CTSTETDTHELRNL
Trigger: TAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGTGCAGCATCGTGACACTTTTGCTAACAGGTACCACTTCTGATCACCCTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
3UTR CCA 90 bp AGTGATTGTGCCTTTCGGCTCATGTATGTACAGGGTGATCAGAAGTaGTACCTGTTAGCAAAAGTGTCACGATGCTGCACCTCTACCGAA +
Preference number: 1 (lower is better)
Translates to: SDCAFRLMYVQGDQK*YLLAKVSRCCTSTE
Trigger: TTCGGTAGAGGTGCAGCATCGTGACACTTTTGCTAACAGGTACCACTTCTGATCACCCTGTACATACATGAGCCGAAAGGCACAATCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
3UTR TCA 90 bp GTACCTGTTAGCAAAAGTGTCACGATGCTGCACCTCTACCGAAACTaGTACCCACGAACTACGGAATCTAAACAGACTACACCCTGTAAC +
Preference number: 1 (lower is better)
Translates to: VPVSKSVTMLHLYRN*YPRTTESKQTTPCN
Trigger: GTTACAGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGTGCAGCATCGTGACACTTTTGCTAACAGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
3UTR CCA 90 bp AATCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATaGAATCTCCAAAGACAAAAGAGTATGAAATTTATCTGTAGTGAT +
Preference number: 1 (lower is better)
Translates to: NLNRLHPVTAYYCPQ*NLQRQKSMKFICSD
Trigger: ATCACTACAGATAAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
3UTR CAA 90 bp AACGAAAATGTCAGAAGTATTTGTCCTACAAGCAGTCTGAGTGGTTaGTCCCGCAGCTGGTCTGGTGACGCTGGCCCTCGCGGATGTCTG +
Preference number: 2 (lower is better)
Translates to: NENVRSICPTSSLSG*SRSWSGDAGPRGCL
Trigger: CAGACATCCGCGAGGGCCAGCGTCACCAGACCAGCTGCGGGACAAACCACTCAGACTGCTTGTAGGACAAATACTTCTGACATTTTCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
3UTR-3UTR TCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTAACAGTTACTCCTGCTaGGCCATTCAGACAAGGAAT +
Preference number: 2 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFNSYSC*AIQTRN
Trigger: ATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTT...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
3UTR-3UTR CCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGAGCTTTCTTGCCACTTaGTCTCCTAAAGCAGCCCAG +
Preference number: 2 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVSFLAT*SPKAAQ
Trigger: CTGGGCTGCTTTAGGAGACCAAGTGGCAAGAAAGCT...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
3UTR-3UTR CCA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTCAGGCCAGACTTAGTTaGGACCTGAGAGTTAAGTGC +
Preference number: 2 (lower is better)
Translates to: TSTETDTHELRNLNRLHPQARLS*DLRVKC
Trigger: GCACTTAACTCTCAGGTCCCAACTAAGTCTGGCCTG...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
3UTR-3UTR GCA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTTTTGCGTCTCTTTTCTaGGTAGACCCAGAACAAGTG +
Preference number: 2 (lower is better)
Translates to: TSTETDTHELRNLNRLHPFASLF*VDPEQV
Trigger: CACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAA...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
3UTR-3UTR TCA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAACAGTTACTCCTGCTaGGCCATTCAGACAAGGAAT +
Preference number: 2 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTNSYSC*AIQTRN
Trigger: ATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTT...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
3UTR-3UTR CCA 90 bp ACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAGAGTATGAAATTTAGCTTTCTTGCCACTTaGTCTCCTAAAGCAGCCCAG +
Preference number: 2 (lower is better)
Translates to: TAYYCPQWNLQRQKSMKFSFLAT*SPKAAQ
Trigger: CTGGGCTGCTTTAGGAGACCAAGTGGCAAGAAAGCT...AAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
3UTR CCA 72 bp TGTCCTACAAGCAGTCTGAGTGGTTTGTCCCGCAGCTaGTCTGGTGACGCTGGCCCTCGCGGATGTCTGCGT +
Preference number: 3 (lower is better)
Translates to: CPTSSLSGLSRS*SGDAGPRGCLR
Trigger: ACGCAGACATCCGCGAGGGCCAGCGTCACCAGACCAGCTGCGGGACAAACCACTCAGACTGCTTGTAGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
3UTR-3UTR CAA 90 bp TGTCCCGCAGCTGGTCTGGTGACGCTGGCCCTCGCGGATGTCTGCGTGTCGCTCTCGCTTCTTTGTTTATaGGTCCGTGTGTTTGTTTTG +
Preference number: 3 (lower is better)
Translates to: CPAAGLVTLALADVCVSLSLLCL*VRVFVL
Trigger: CAAAACAAACACACGGACCAATAAACAAAGAAGCGA...GAGCGACACGCAGACATCCGCGAGGGCCAGCGTCACCAGACCAGCTGCGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
3UTR TCA 72 bp GCTGGCCCTCGCGGATGTCTGCGTGTCGCTCACATGTaGATGAGTGAGGTAATTGGATATGAGGCCTTCTTT +
Preference number: 3 (lower is better)
Translates to: AGPRGCLRVAHM*MSEVIGYEAFF
Trigger: AAAGAAGGCCTCATATCCAATTACCTCACTCATTCACATGTGAGCGACACGCAGACATCCGCGAGGGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
3UTR-3UTR CAA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAGCAGTCTGAGTGGTTaGTCCCGCAGCTGGTCTGGT +
Preference number: 3 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTSSLSG*SRSWSG
Trigger: ACCAGACCAGCTGCGGGACAAACCACTCAGACTGCT...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
3UTR TCA 72 bp ACGAAAATGTCAGAAGTATTTGTCCTACAAGCAGTCTaGGTGGTTTGTCCCGCAGCTGGTCTGGTGACGCTG +
Preference number: 3 (lower is better)
Translates to: TKMSEVFVLQAV*VVCPAAGLVTL
Trigger: CAGCGTCACCAGACCAGCTGCGGGACAAACCACTCAGACTGCTTGTAGGACAAATACTTCTGACATTTTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
3UTR GCA 72 bp CAGAAGTGGTACCTGTTAGCAAAAGTGTCACGATGCTaGACCTCTACCGAAACTGATACCCACGAACTACGG +
Preference number: 3 (lower is better)
Translates to: QKWYLLAKVSRC*TSTETDTHELR
Trigger: CCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGTGCAGCATCGTGACACTTTTGCTAACAGGTACCACTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
3UTR CCA 72 bp GCCTTTCGGCTCATGTATGTACAGGGTGATCAGAAGTaGTACCTGTTAGCAAAAGTGTCACGATGCTGCACC +
Preference number: 3 (lower is better)
Translates to: AFRLMYVQGDQK*YLLAKVSRCCT
Trigger: GGTGCAGCATCGTGACACTTTTGCTAACAGGTACCACTTCTGATCACCCTGTACATACATGAGCCGAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
3UTR GCA 72 bp GATCAGAAGTGGTACCTGTTAGCAAAAGTGTCACGATaGTGCACCTCTACCGAAACTGATACCCACGAACTA +
Preference number: 3 (lower is better)
Translates to: DQKWYLLAKVSR*CTSTETDTHEL
Trigger: TAGTTCGTGGGTATCAGTTTCGGTAGAGGTGCAGCATCGTGACACTTTTGCTAACAGGTACCACTTCTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
3UTR TCA 72 bp AGCAAAAGTGTCACGATGCTGCACCTCTACCGAAACTaGTACCCACGAACTACGGAATCTAAACAGACTACA +
Preference number: 3 (lower is better)
Translates to: SKSVTMLHLYRN*YPRTTESKQTT
Trigger: TGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGTGCAGCATCGTGACACTTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
3UTR TCA 72 bp CATCTCCTTAGGAGAGGAGATAACAGTTACTCCTGCTaGGCCATTCAGACAAGGAATGGCAGCAGATTATTT +
Preference number: 3 (lower is better)
Translates to: HLLRRGDNSYSC*AIQTRNGSRLF
Trigger: AAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAAGGAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
3UTR GCA 72 bp CGAACTACGGAATCTAAACAGACTACACCCTGTAACTaGGTATTACTGTCCACAATGGAATCTCCAAAGACA +
Preference number: 3 (lower is better)
Translates to: RTTESKQTTPCN*VLLSTMESPKT
Trigger: TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGATTCCGTAGTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
3UTR-3UTR CAA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAGTTCTTTTGTTCCTTTaGGACACTTTGCGTCTCTTT +
Preference number: 3 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTVLLFL*DTLRLF
Trigger: AAAGAGACGCAAAGTGTCCAAAAGGAACAAAAGAAC...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
3UTR CCA 72 bp AGACTACACCCTGTAACTGCGTATTACTGTCCACAATaGAATCTCCAAAGACAAAAGAGTATGAAATTTATC +
Preference number: 3 (lower is better)
Translates to: RLHPVTAYYCPQ*NLQRQKSMKFI
Trigger: GATAAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp TGTCCCGCAGCTGGTCTGGTGACGCTGGCCCTCGCGGATGTCTGCGTGTCGCTCTTTCCCGGTGCAGACTaGTTACCACCCCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: CPAAGLVTLALADVCVSLFPGAD*LPPPWG
Trigger: GCCCCACGGGGGTGGTAACCAGTCTGCACCGGGAAA...GAGCGACACGCAGACATCCGCGAGGGCCAGCGTCACCAGACCAGCTGCGGGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp TGTCCCGCAGCTGGTCTGGTGACGCTGGCCCTCGCGGATGTCTGCGTGTCGCTCTCCCCGAGGAGGTCTTaGAGAGGAAGTGCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: CPAAGLVTLALADVCVSLSPRRS*RGSAGS
Trigger: AGACCCGGCACTTCCTCTTCAAGACCTCCTCGGGGA...GAGCGACACGCAGACATCCGCGAGGGCCAGCGTCACCAGACCAGCTGCGGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp TGTCCCGCAGCTGGTCTGGTGACGCTGGCCCTCGCGGATGTCTGCGTGTCGCTCTCTGGTTGTCAGGCATaGGCAGGTGACGGGGCATGC +
Preference number: 4 (lower is better)
Translates to: CPAAGLVTLALADVCVSLSGCQA*AGDGAC
Trigger: GCATGCCCCGTCACCTGCTCATGCCTGACAACCAGA...GAGCGACACGCAGACATCCGCGAGGGCCAGCGTCACCAGACCAGCTGCGGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp TGTCCCGCAGCTGGTCTGGTGACGCTGGCCCTCGCGGATGTCTGCGTGTCGCTCGACGGGGCATGCCACTaGTGTCCCGACGGATCTTCA +
Preference number: 4 (lower is better)
Translates to: CPAAGLVTLALADVCVSLDGACH*CPDGSS
Trigger: TGAAGATCCGTCGGGACAGCAGTGGCATGCCCCGTC...GAGCGACACGCAGACATCCGCGAGGGCCAGCGTCACCAGACCAGCTGCGGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp TGTCCCGCAGCTGGTCTGGTGACGCTGGCCCTCGCGGATGTCTGCGTGTCGCTCCCTCTCTCCCGTCCCTaGCTTTCTGCTGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: CPAAGLVTLALADVCVSLPLSRP*LSAAPW
Trigger: CCAAGGAGCAGCAGAAAGCCAGGGACGGGAGAGAGG...GAGCGACACGCAGACATCCGCGAGGGCCAGCGTCACCAGACCAGCTGCGGGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp TGTCCCGCAGCTGGTCTGGTGACGCTGGCCCTCGCGGATGTCTGCGTGTCGCTCACTCACAGACTGAGGTaGGGTACTGCCGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: CPAAGLVTLALADVCVSLTHRLR*GTAGSP
Trigger: TGGAGACCCGGCAGTACCTCACCTCAGTCTGTGAGT...GAGCGACACGCAGACATCCGCGAGGGCCAGCGTCACCAGACCAGCTGCGGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp TGTCCCGCAGCTGGTCTGGTGACGCTGGCCCTCGCGGATGTCTGCGTGTCGCTCAGAAGTATGACACGTTaGCAGCTGCCAGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: CPAAGLVTLALADVCVSLRSMTR*QLPARC
Trigger: GCAGCGGGCTGGCAGCTGTCAACGTGTCATACTTCT...GAGCGACACGCAGACATCCGCGAGGGCCAGCGTCACCAGACCAGCTGCGGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACTCATGGCCCCACGCTaGAGCCCAGCCAGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSLMAPR*SPARRP
Trigger: TGGGCGCCTGGCTGGGCTTCAGCGTGGGGCCATGAG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TGTCCCGCAGCTGGTCTGGTGACGCTGGCCCTCGCGGATGTCTGCGTGTCGCTCGGCAGATCTCCCCGTTaGTTGTTACCTGGCGTAGAC +
Preference number: 4 (lower is better)
Translates to: CPAAGLVTLALADVCVSLGRSPR*LLPGVD
Trigger: GTCTACGCCAGGTAACAACCAACGGGGAGATCTGCC...GAGCGACACGCAGACATCCGCGAGGGCCAGCGTCACCAGACCAGCTGCGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp TGTCCCGCAGCTGGTCTGGTGACGCTGGCCCTCGCGGATGTCTGCGTGTCGCTCGGTTCTCTCCAGGAATaGTGTGGGTGCTATCCTTGC +
Preference number: 4 (lower is better)
Translates to: CPAAGLVTLALADVCVSLGSLQE*CGCYPC
Trigger: GCAAGGATAGCACCCACATCATTCCTGGAGAGAACC...GAGCGACACGCAGACATCCGCGAGGGCCAGCGTCACCAGACCAGCTGCGGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGCGGCCGGACGGCAGTaGGGTCATTGGAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSAAGRQ*GHWSPA
Trigger: TGCTGGGCTCCAATGACCTCACTGCCGTCCGGCCGC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACAGCTGCCAGCCCGCTaGTGGGCAGCCAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSQLPAR*WAARGR
Trigger: CCTTCCTCTGGCTGCCCAGCAGCGGGCTGGCAGCTG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGGGTGGCACACGCGCTaGTCACACGCTGCGCCTGTC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSGWHTR*SHAAPV
Trigger: GACAGGCGCAGCGTGTGACCAGCGCGTGTGCCACCC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TGTCCCGCAGCTGGTCTGGTGACGCTGGCCCTCGCGGATGTCTGCGTGTCGCTCTGCTGGGTCAGGAACTaGTTTTCCCCAGTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: CPAAGLVTLALADVCVSLCWVRN*FSPVPL
Trigger: CAAAGGCACTGGGGAAAACCAGTTCCTGACCCAGCA...GAGCGACACGCAGACATCCGCGAGGGCCAGCGTCACCAGACCAGCTGCGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACTTCGCTGGCGATGCTaGACACGCCCGTGGTCACCC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSLRWRC*TRPWSP
Trigger: GGGTGACCACGGGCGTGTCCAGCATCGCCAGCGAAG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TGTCCCGCAGCTGGTCTGGTGACGCTGGCCCTCGCGGATGTCTGCGTGTCGCTCCGTGTCGCTCACATGTaGATGAGTGAGGTAATTGGA +
Preference number: 4 (lower is better)
Translates to: CPAAGLVTLALADVCVSLRVAHM*MSEVIG
Trigger: TCCAATTACCTCACTCATTCACATGTGAGCGACACG...GAGCGACACGCAGACATCCGCGAGGGCCAGCGTCACCAGACCAGCTGCGGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGCCGCAGCTGGTCTGGTaGCGCTGGCCCTCGCGGATG +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWPQLVW*RWPSRM
Trigger: CATCCGCGAGGGCCAGCGTCACCAGACCAGCTGCGG...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACACAGTTCCCATCAATaGAGGAGCCGTGGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSHSSHQ*RSRGPR
Trigger: GCGGGGGCCACGGCTCCTGCATTGATGGGAACTGTG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TGTCCCGCAGCTGGTCTGGTGACGCTGGCCCTCGCGGATGTCTGCGTGTCGCTCACTGGTTTTCCCCAGTaGCTTTGTGTAGGATTCCAC +
Preference number: 4 (lower is better)
Translates to: CPAAGLVTLALADVCVSLTGFPQ*LCVGFH
Trigger: GTGGAATCCTACACAAAGGCACTGGGGAAAACCAGT...GAGCGACACGCAGACATCCGCGAGGGCCAGCGTCACCAGACCAGCTGCGGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATGGAGAAAGTATTCCTaGGCAGCAGGCGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSWRKYS*AAGGAG
Trigger: CCCCGCCCCGCCTGCTGCCCAGGAATACTTTCTCCA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACTGAATGATGTCCAGTaGGTCCCGGGACCCCCGGCA +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSLNDVQ*VPGPPA
Trigger: TGCCGGGGGTCCCGGGACCCACTGGACATCATTCAG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACACACAGTGCGCTCCTaGCTCATGAACGGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSHTVRS*LMNGAR
Trigger: GCGAGCCCCGTTCATGAGCCAGGAGCGCACTGTGTG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGTGCCCGCTAGGACATaGGGCTCGCTGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSVPART*GSLWKL
Trigger: CAGCTTCCACAGCGAGCCCCATGTCCTAGCGGGCAC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACTGTCCTCTCGCTCATaGCCCCACGCTGAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSLSSRS*PHAEAQ
Trigger: CTGGGCTTCAGCGTGGGGCCATGAGCGAGAGGACAG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAACCAGCAGCGTGGGCTaGGACACGGTCACGTTCACC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSTSSVG*DTVTFT
Trigger: GGTGAACGTGACCGTGTCCCAGCCCACGCTGCTGGT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGCTGTTCTGACAGGCTaGCTGCAGGCAGCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSAVLTG*LQAAVR
Trigger: CCTGACTGCTGCCTGCAGTCAGCCTGTCAGAACAGC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACAGAGCAGGCTGTTCTaGCAGGCTGACTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSQSRLF*QADCRQ
Trigger: CTGCCTGCAGTCAGCCTGTCAGAACAGCCTGCTCTG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATGCGCTCCTGGCTCATaGACGGGGCTCGCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSCAPGS*TGLAQS
Trigger: ACTTTGAGCGAGCCCCGTTCATGAGCCAGGAGCGCA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TGTCCCGCAGCTGGTCTGGTGACGCTGGCCCTCGCGGATGTCTGCGTGTCGCTCAACAGTTACTCCTGCTaGGCCATTCAGACAAGGAAT +
Preference number: 4 (lower is better)
Translates to: CPAAGLVTLALADVCVSLNSYSC*AIQTRN
Trigger: ATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTT...GAGCGACACGCAGACATCCGCGAGGGCCAGCGTCACCAGACCAGCTGCGGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp TGTCCCGCAGCTGGTCTGGTGACGCTGGCCCTCGCGGATGTCTGCGTGTCGCTCTTGAGTCCGAGCAGATaGATTGCTATGAAATACGCC +
Preference number: 4 (lower is better)
Translates to: CPAAGLVTLALADVCVSLLSPSR*IAMKYA
Trigger: GGCGTATTTCATAGCAATGCATCTGCTCGGACTCAA...GAGCGACACGCAGACATCCGCGAGGGCCAGCGTCACCAGACCAGCTGCGGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGGGCAGGCTCCCCCGATaGAGACGCCGTGAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWGRLPR*RRRECH
Trigger: GTGGCACTCACGGCGTCTGCATCGGGGGAGCCTGCC...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAAGCTGGGACAGGAAATaGTCCGGCGGCGACCATTGC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSSWDRK*SGGDHC
Trigger: GCAATGGTCGCCGCCGGAGCATTTCCTGTCCCAGCT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGACGGGGCATGCCACTaGTGTCCCGACGGATCTTCA +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSDGACH*CPDGSS
Trigger: TGAAGATCCGTCGGGACAGCAGTGGCATGCCCCGTC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATCCCGTCAGCGAACATaGGGGACACGATGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSSRQRT*GTRCGL
Trigger: AAGGCCGCATCGTGTCCCGCATGTTCGCTGACGGGA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCCTTGGCCCAGGCCGTaGCCAGGGCCCTCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSPWPRP*PGPSVS
Trigger: CGAGACAGAGGGCCCTGGGCACGGCCTGGGCCAAGG...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGGGGTGGCACACGCGCTaGTCACACGCTGCGCCTGTC +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWGWHTR*SHAAPV
Trigger: GACAGGCGCAGCGTGTGACCAGCGCGTGTGCCACCC...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TGTCCCGCAGCTGGTCTGGTGACGCTGGCCCTCGCGGATGTCTGCGTGTCGCTCTCTGTAGTTACTACTTaGCCTCGGATGAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: CPAAGLVTLALADVCVSLSVVTT*PRMRET
Trigger: GGTTTCTCTCATCCGAGGCCAAGTAGTAACTACAGA...GAGCGACACGCAGACATCCGCGAGGGCCAGCGTCACCAGACCAGCTGCGGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp TGTCCCGCAGCTGGTCTGGTGACGCTGGCCCTCGCGGATGTCTGCGTGTCGCTCTTAGGCGCCACTCAATaGAGTTTAAGCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: CPAAGLVTLALADVCVSLLGATQ*SLSHSP
Trigger: TGGAGAATGGCTTAAACTCCATTGAGTGGCGCCTAA...GAGCGACACGCAGACATCCGCGAGGGCCAGCGTCACCAGACCAGCTGCGGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTGCCAGCCCGCTGCTaGGCAGCCAGAGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSLPARC*AARGRG
Trigger: GCCCCTTCCTCTGGCTGCCCAGCAGCGGGCTGGCAG...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACGATGGAGGTGTGTGTaGACATGCTGTGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSRWRCV*TCCAGP
Trigger: TGGCCCGGCACAGCATGTCCACACACACCTCCATCG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATGCCACAGCGTCCTCTaGTCAAAGAGCGGTGTCGCC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSCHSVL*SKSGVA
Trigger: GGCGACACCGCTCTTTGACCAGAGGACGCTGTGGCA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGGCCGGAACTGCGCCTaGATTTTATCCCTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSGRNCA*ILSLCP
Trigger: GGGGCAGAGGGATAAAATCCAGGCGCAGTTCCGGCC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS-3UTR TCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGTGTGGACACGACTTTaGGGCCTCCATTGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSVWTRL*GLHWCP
Trigger: TGGGCACCAATGGAGGCCTCAAAGTCGTGTCCACAC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAAGAAGTATGACACGTTaGCAGCTGCCAGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSRSMTR*QLPARC
Trigger: GCAGCGGGCTGGCAGCTGTCAACGTGTCATACTTCT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACCACGCTGGGCATGGTaGCGGCAAGGAGGCGGTCAG +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGPRWAW*RQGGGQ
Trigger: CTGACCGCCTCCTTGCCGTCACCATGCCCAGCGTGG...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACGTCATACCCGAAGGTaGCGGCGGTACTGTCGTAGA +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSRHTRR*RRYCRR
Trigger: TCTACGACAGTACCGCCGTCACCTTCGGGTATGACG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAGGTCGGGCGGTCATTaGCGGCCACGCTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWRSGGH*RPRSGA
Trigger: AGCTCCAGAGCGTGGCCGTCAATGACCGCCCGACCT...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACCCCATGGAAGCCAATaGCCATCTGGAAGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSPHGSQ*PSGSRG
Trigger: ACCCCGACTTCCAGATGGTCATTGGCTTCCATGGGG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGAACCAAGGTCTGTATaGTCCGGCGTTCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSEPRSV*SGVPWE
Trigger: CTCCCAGGGAACGCCGGAGCATACAGACCTTGGTTC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACACCCCAGCCAGGGCTaGACAGGCATTCTCCATTCA +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSHPSQG*TGILHS
Trigger: TGAATGGAGAATGCCTGTGCAGCCCTGGCTGGGGTG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATTTCCATGGCAACGTTaGATCCGGGCCCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSFPWQR*IRALSS
Trigger: GCTGGAGAGGGCCCGGATGCAACGTTGCCATGGAAA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGGCACGATGGGATTCTaGCCAGGGGCAGCACTAAAG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSGTMGF*PGAALK
Trigger: CTTTAGTGCTGCCCCTGGGCAGAATCCCATCGTGCC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACTGCTCTCCCGTCCCTaGCACAACTTCCGAATTCCC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSLLSRP*HNFRIP
Trigger: GGGAATTCGGAAGTTGTGGCAGGGACGGGAGAGCAG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATATCTTCGCTGGCGATaGTGGACACGCCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSYLRWR*WTRPWS
Trigger: TGACCACGGGCGTGTCCAGCATCGCCAGCGAAGATA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCCTTGGCCCAGGCCGTaGCCAGGGCCCTCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADPWPRP*PGPSVS
Trigger: CGAGACAGAGGGCCCTGGGCACGGCCTGGGCCAAGG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGGTCATTGGGCGCTaGGGCCGGGGCGTGGATCTG +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGQVIGR*GRGVDL
Trigger: CAGATCCACGCCCCGGCCCCAGCGCCCAATGACCTG...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATCAGTGAGTTCCTGTTaGGGGAGTTGGCGGACGAGT +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSSVSSC*GSWRTS
Trigger: ACTCGTCCGCCAACTCCCTCAACAGGAACTCACTGA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGTCTGGCCCTGCTGAATaGTGTCCAGTGGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWSGPAE*CPVGPG
Trigger: CCCGGGACCCACTGGACATCATTCAGCAGGGCCAGA...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACTGTCTTGTCCCAGATaGAGGTGTAGGCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSLSCPR*RCRPGW
Trigger: CCAACCTGGCCTACACCTTCATCTGGGACAAGACAG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGAGGTCGGGCGGTCATTaGCGGCCACGCTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSRSGGH*RPRSGA
Trigger: AGCTCCAGAGCGTGGCCGTCAATGACCGCCCGACCT...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCGGCAGGCTCCCCCGATaGAGACGCCGTGAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFGRLPR*RRRECH
Trigger: GTGGCACTCACGGCGTCTGCATCGGGGGAGCCTGCC...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAGCGCTGGTCACACGCTaGGCCTGTCCAGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGALVTR*ACPALF
Trigger: GAAGAGGGCTGGACAGGCGCAGCGTGTGACCAGCGC...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATCGGTGCCTGCCGTTTaGCTACCAATGGTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSSVPAV*LPMVQC
Trigger: ACACTGCACCATTGGTAGGCAAACGGCAGGCACCGA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGGAAGCACCTCCATTTaGGATCAGGTCGAACGTGCC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSGSTSI*DQVERA
Trigger: GGCACGTTCGACCTGATCGCAAATGGAGGTGCTTCC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGACACGATGCGGCCTTaGTTGTCGATGTCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSDTMRP*LSMSVL
Trigger: GAGGACAGACATCGACAAGCAAGGCCGCATCGTGTC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATGGACAGGCCGGAACTaGGCCTGGATTTTATCCCTC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSWTGRN*AWILSL
Trigger: GAGGGATAAAATCCAGGCGCAGTTCCGGCCTGTCCA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS-3UTR CCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGGGCCTCAGAGTCGACTaGCTGTGGTGGTTCGGAGGG +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWGLRVD*LWWFGG
Trigger: CCCTCCGAACCACCACAGCCAGTCGACTCTGAGGCC...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCCAGGTCATTGGGCGCTaGGGCCGGGGCGTGGATCTG +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFQVIGR*GRGVDL
Trigger: CAGATCCACGCCCCGGCCCCAGCGCCCAATGACCTG...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACCCACTGCACTGGTCTaGGCACTGGACCCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGPTALV*ALDPRQ
Trigger: CTGGCGAGGGTCCAGTGCCCAGACCAGTGCAGTGGG...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGCACACAGTGCGCTCCTaGCTCATGAACGGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWHTVRS*LMNGAR
Trigger: GCGAGCCCCGTTCATGAGCCAGGAGCGCACTGTGTG...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGGCAGATCTCCCCGTTaGTTGTTACCTGGCGTAGAC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSGRSPR*LLPGVD
Trigger: GTCTACGCCAGGTAACAACCAACGGGGAGATCTGCC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTTGGGGCGCGTCACGTTaGTCAGGCGGCCTTCGTGGT +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFWGASR*SGGLRG
Trigger: ACCACGAAGGCCGCCTGACCAACGTGACGCGCCCCA...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGGTGCCCGCTAGGACATaGGGCTCGCTGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWVPART*GSLWKL
Trigger: CAGCTTCCACAGCGAGCCCCATGTCCTAGCGGGCAC...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACTGCCAGCCCGCTGCTaGGCAGCCAGAGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMALPARC*AARGRG
Trigger: GCCCCTTCCTCTGGCTGCCCAGCAGCGGGCTGGCAG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACCACATGGTATAGTCTaGGGAGGTCCATCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSPHGIV*GGPSSC
Trigger: GCAGGACGATGGACCTCCCCAGACTATACCATGTGG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACCAGCAGCGTGGGCTaGGACACGGTCACGTTCACC +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWTSSVG*DTVTFT
Trigger: GGTGAACGTGACCGTGTCCCAGCCCACGCTGCTGGT...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGCCCTCTGTCTCGCCTaGTCCAGGACGCGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADALCLA*SRTRAF
Trigger: GAAGGCCCGCGTCCTGGACCAGGCGAGACAGAGGGC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATGTAGGATTTCTGTGTaGGCACGCGGCAGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSCRISV*ARGSPH
Trigger: GTGAGGACTGCCGCGTGCCCACACAGAAATCCTACA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518659.5
3UTR CAA 72 bp GTCAGAAGTATTTGTCCTACAAGCAGTCTGAGTGGTTaGTCCCGCAGCTGGTCTGGTGACGCTGGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: VRSICPTSSLSG*SRSWSGDAGPR
Trigger: GCGAGGGCCAGCGTCACCAGACCAGCTGCGGGACAAACCACTCAGACTGCTTGTAGGACAAATACTTCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGCCGGGGCGTGGATCTaGCTCCGCCGATTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADAGAWI*LRRLVS
Trigger: ACTGACCAATCGGCGGAGTCAGATCCACGCCCCGGC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCGCCGGGGCGTGGATCTaGCTCCGCCGATTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFAGAWI*LRRLVS
Trigger: ACTGACCAATCGGCGGAGTCAGATCCACGCCCCGGC...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGTCCCCGAGGAGGTCTTaGAGAGGAAGTGCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWSPRRS*RGSAGS
Trigger: AGACCCGGCACTTCCTCTTCAAGACCTCCTCGGGGA...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCCGGGGAAGAGCTGCTaGACAAGGGTGTGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADPGKSC*TRVCSP
Trigger: CGGGGAGCACACCCTTGTTCAGCAGCTCTTCCCCGG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACGTCCAGACGTTCCATaGAGTCATACTGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSRPDVP*SHTGHE
Trigger: CTCATGCCCAGTATGACTTCATGGAACGTCTGGACG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGCCGATGCAGACGCCGTaGGTGCCACAGTCTACTGAG +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWPMQTP*VPQSTE
Trigger: CTCAGTAGACTGTGGCACTCACGGCGTCTGCATCGG...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACTACTTGGCCTCGGATaGGAGAAACCAAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSLLGLG*EKPSCC
Trigger: ACAGCAGCTTGGTTTCTCTCATCCGAGGCCAAGTAG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAGCCGGACAAAGCCACTaGGGTCACAGCTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGAGQSH*GHSWGW
Trigger: CCATCCCCAGCTGTGACCTCAGTGGCTTTGTCCGGC...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGCCACGCTGGGCATGGTaGCGGCAAGGAGGCGGTCAG +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVPRWAW*RQGGGQ
Trigger: CTGACCGCCTCCTTGCCGTCACCATGCCCAGCGTGG...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAAGTCAAACCTGGCATTaGCCATGCCTTCCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSSQTWH*PCLPRR
Trigger: TCTCCGAGGAAGGCATGGTCAATGCCAGGTTTGACT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGATGGTGGTGCCTAGTGTaGCCAGGTCGCCATCGGCTG +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGWWCLV*PGRHRL
Trigger: CAGCCGATGGCGACCTGGTCACACTAGGCACCACCA...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATCTAGGAAACTCATCTaGCTCCCGGTGGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSSRKLI*LPVDEV
Trigger: GACCTCATCCACCGGGAGTCAGATGAGTTTCCTAGA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGGTTCGGAGGGCCACTaGTGGAGGCTTGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAGSEGH*WRLAGA
Trigger: GGCCCCAGCAAGCCTCCAGCAGTGGCCCTCCGAACC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATCTCCAGTGGCACGTTaGTGTTTAGCACCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSSPVAR*CLAPSC
Trigger: ACAGCTGGGTGCTAAACAGCAACGTGCCACTGGAGA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATCTGCAGGCTGGAGTTaGCAATTGAGTCCGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSSAGWS*QLSPSR
Trigger: TCTGCTCGGACTCAATTGGCAACTCCAGCCTGCAGA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACGCAGGAAGGATCGATaGACTGATTCATGGGCACGT +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSRRKDR*TDSWAR
Trigger: ACGTGCCCATGAATCAGTGCATCGATCCTTCCTGCG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTCACAGTTCCCATCAATaGAGGAGCCGTGGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFHSSHQ*RSRGPR
Trigger: GCGGGGGCCACGGCTCCTGCATTGATGGGAACTGTG...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGGCAGGCTCCCCCGATaGAGACGCCGTGAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAGRLPR*RRRECH
Trigger: GTGGCACTCACGGCGTCTGCATCGGGGGAGCCTGCC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGCGCTGGTCACACGCTaGGCCTGTCCAGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADALVTR*ACPALF
Trigger: GAAGAGGGCTGGACAGGCGCAGCGTGTGACCAGCGC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGTGATGATGGCAGGCTaGTGGGTCAGGAACTGGTTT +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSVMMAG*WVRNWF
Trigger: AAACCAGTTCCTGACCCAGCAGCCTGCCATCATCAC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGCAGGTGACGGGGCATaGCACTGCTGTCCCGACGGA +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADAGDGA*HCCPDG
Trigger: TCCGTCGGGACAGCAGTGGCATGCCCCGTCACCTGC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGTGTGTGGACATGCTGTaGCGGGCCACGCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSCVDML*RATLGM
Trigger: CATGCCCAGCGTGGCCCGGCACAGCATGTCCACACA...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAAGGTGTGTGTGGACATaGTGTGCCGGGCCACGCTGG +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGRCVWT*CAGPRW
Trigger: CCAGCGTGGCCCGGCACAGCATGTCCACACACACCT...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAAGTACTCCTCCCCACTaGTGCTCTCCATGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSSTPPH*CSPWQR
Trigger: TCTTTGCCATGGAGAGCAGCAGTGGGGAGGAGTACT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAAGTAGTGGGTGTCCTTaGCCTCGATGCTGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSSSGCP*PRCCSA
Trigger: TGCACTACAGCATCGAGGGCAAGGACACCCACTACT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGCGCTCTCTAGCACCTTaGGGCCGATGGTGGTGCCTA +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWRSLAP*GRWWCL
Trigger: TAGGCACCACCATCGGCCGCAAGGTGCTAGAGAGCG...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGCCTTGGCCCAGGCCGTaGCCAGGGCCCTCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRPWPRP*PGPSVS
Trigger: CGAGACAGAGGGCCCTGGGCACGGCCTGGGCCAAGG...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGTCCCTGGCTTTCTGCTaGTCCTTGGCCCAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSSLAFC*SLAQAV
Trigger: CACGGCCTGGGCCAAGGAGCAGCAGAAAGCCAGGGA...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACTGGCAGCTAACTGGTaGAGGATTATGGGAGCTAGG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSLAANW*RIMGAR
Trigger: CCTAGCTCCCATAATCCTCCACCAGTTAGCTGCCAG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR CCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGGTGGTTGTGAGGGGGTaGGAGAGGGGGCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSVVVRG*ERGPQS
Trigger: ACTCTGAGGCCCCCTCTCCCACCCCCTCACAACCAC...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACAGGTCATTGGGCGCTaGGGCCGGGGCGTGGATCTG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAQVIGR*GRGVDL
Trigger: CAGATCCACGCCCCGGCCCCAGCGCCCAATGACCTG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTCGGACTCTGGTGTGGTaGCCAGGTCATTGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFRTLVW*PGHWAL
Trigger: CAGCGCCCAATGACCTGGCCACCACACCAGAGTCCG...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAAAGCTGAACGGACTCTaGTGTGGTGGCCAGGTCATT +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSKLNGL*CGGQVI
Trigger: AATGACCTGGCCACCACACCAGAGTCCGTTCAGCTT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTTGGAGAAAGTATTCCTaGGCAGCAGGCGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFWRKYS*AAGGAG
Trigger: CCCCGCCCCGCCTGCTGCCCAGGAATACTTTCTCCA...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGGAGGGCCGCGGCAATaGCGGAGAGGGCAGCACATT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADGGPRQ*RRGQHI
Trigger: AATGTGCTGCCCTCTCCGCCATTGCCGCGGCCCTCC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACCAAAACACCCCTGGTaGGACTTCTTGTGTTACCCG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSPKHPW*DFLCYP
Trigger: CGGGTAACACAAGAAGTCCCACCAGGGGTGTTTTGG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGTCAATGCAGGAGCCGTaGCCCCCGCAGGAAGGATCG +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSSMQEP*PPQEGS
Trigger: CGATCCTTCCTGCGGGGGCCACGGCTCCTGCATTGA...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCACTGGTCTGGGCACTaGACCCTCGCCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSHWSGH*TLASSQ
Trigger: CTGTGAGCTGGCGAGGGTCCAGTGCCCAGACCAGTG...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCCCACTGCACTGGTCTaGGCACTGGACCCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADPTALV*ALDPRQ
Trigger: CTGGCGAGGGTCCAGTGCCCAGACCAGTGCAGTGGG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTCGGGACCCATCCAGTTaGGATCGCAGCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFRDPSS*DRSCRG
Trigger: GCCTCTGCAGCTGCGATCCCAACTGGATGGGTCCCG...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGATCAATGCAGCGGGGGTaGCACACGCGCTGGTCACAC +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGSMQRG*HTRWSH
Trigger: GTGTGACCAGCGCGTGTGCCACCCCCGCTGCATTGA...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTGAATGATGTCCAGTaGGTCCCGGGACCCCCGGCA +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSLNDVQ*VPGPPA
Trigger: TGCCGGGGGTCCCGGGACCCACTGGACATCATTCAG...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGCCTGGAATGACTTCTaGAAGAGATGCCCCTCGACA +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSAWNDF*KRCPST
Trigger: TGTCGAGGGGCATCTCTTCCAGAAGTCATTCCAGGC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAAGATTCTCCTGCTGTTaGTGTCGGACACGTAGAGCG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSRFSCC*CRTRRA
Trigger: CGCTCTACGTGTCCGACACCAACAGCAGGAGAATCT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACACTCCAGACGAACCTaGGCTACATCCATGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSHSRRT*ATSMLE
Trigger: TTCCAGCATGGATGTAGCCCAGGTTCGTCTGGAGTG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAAAATGGCAATGGCACTaGCTGACTCCAGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSKWQWH*LTPGQS
Trigger: ACTCTGCCCTGGAGTCAGCCAGTGCCATTGCCATTT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATGTGAGAAATGGCAATaGCACTGGCTGACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSCEKWQ*HWLTPG
Trigger: CCCTGGAGTCAGCCAGTGCCATTGCCATTTCTCACA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTGGGGCGCGTCACGTTaGTCAGGCGGCCTTCGTGGT +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFWGASR*SGGLRG
Trigger: ACCACGAAGGCCGCCTGACCAACGTGACGCGCCCCA...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTTGGTTACCACCCCCGTaGGGCGCGTCACGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFWLPPP*GASRWS
Trigger: TGACCAACGTGACGCGCCCCACGGGGGTGGTAACCA...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGTGGTTACCACCCCCGTaGGGCGCGTCACGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSWLPPP*GASRWS
Trigger: TGACCAACGTGACGCGCCCCACGGGGGTGGTAACCA...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACGGAACATCTCATACTaGACCTCCTTGATCCGCCCA +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSRNISY*TSLIRP
Trigger: TGGGCGGATCAAGGAGGTCCAGTATGAGATGTTCCG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTGGTGGTGGCCCAGGTTaGTCTTGTAGGAAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFGGGPG*SCRKPA
Trigger: GGCGGGCTTCCTACAAGACCAACCTGGGCCACCACC...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGGGTTTGTCCCGCAGCTaGTCTGGTGACGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSGLSRS*SGDAGP
Trigger: AGGGCCAGCGTCACCAGACCAGCTGCGGGACAAACC...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATGCTCTGAGCAGGTATaGATTGGGGGAGAATTCCTC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSCSEQV*IGGEFL
Trigger: GAGGAATTCTCCCCCAATTCATACCTGCTCAGAGCA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR TCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGATTGGCGGACGAGTGGTaGTGGGACAGCGTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGLADEW*WDSVWL
Trigger: CAACCACACGCTGTCCCATCACCACTCGTCCGCCAA...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTCCGGGGAAGAGCTGCTaGACAAGGGTGTGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: TSTETDTHELRNLNRLHPPGKSC*TRVCSP
Trigger: CGGGGAGCACACCCTTGTTCAGCAGCTCTTCCCCGG...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACACTGCCAGCTGTTCTaGCCCAGTGTGCATCTCCCG +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGHCQLF*PSVHLP
Trigger: CGGGAGATGCACACTGGGTCAGAACAGCTGGCAGTG...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCACTGCCAGCTGTTCTaGCCCAGTGTGCATCTCCCG +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSHCQLF*PSVHLP
Trigger: CGGGAGATGCACACTGGGTCAGAACAGCTGGCAGTG...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGGCTGTTCTGACAGGCTaGCTGCAGGCAGCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSAVLTG*LQAAVR
Trigger: CCTGACTGCTGCCTGCAGTCAGCCTGTCAGAACAGC...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCAGAGCAGGCTGTTCTaGCAGGCTGACTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSQSRLF*QADCRQ
Trigger: CTGCCTGCAGTCAGCCTGTCAGAACAGCCTGCTCTG...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTCAGAGCAGGCTGTTCTaGCAGGCTGACTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFQSRLF*QADCRQ
Trigger: CTGCCTGCAGTCAGCCTGTCAGAACAGCCTGCTCTG...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTCTGGCCCTGCTGAATaGTGTCCAGTGGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADSGPAE*CPVGPG
Trigger: CCCGGGACCCACTGGACATCATTCAGCAGGGCCAGA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGATGCGCTCCTGGCTCATaGACGGGGCTCGCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGCAPGS*TGLAQS
Trigger: ACTTTGAGCGAGCCCCGTTCATGAGCCAGGAGCGCA...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTTCTGGTTGTCAGGCATaGGCAGGTGACGGGGCATGC +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFSGCQA*AGDGAC
Trigger: GCATGCCCCGTCACCTGCTCATGCCTGACAACCAGA...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAGTCCAATGGTGGGGGTaGTGGTGCCCGCTAGGACAT +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGVQWWG*WCPLGH
Trigger: ATGTCCTAGCGGGCACCATCACCCCCACCATTGGAC...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACCCATTGAAGAAGTATaGCACGTTGACAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSPIEEV*HVDSCQ
Trigger: CTGGCAGCTGTCAACGTGTCATACTTCTTCAATGGG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAAGGTCGGGCGGTCATTaGCGGCCACGCTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMARSGGH*RPRSGA
Trigger: AGCTCCAGAGCGTGGCCGTCAATGACCGCCCGACCT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTGGCCATAGCGGATGCTaGGCAGCAGCGTGGAGTACT +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFGHSGC*AAAWST
Trigger: AGTACTCCACGCTGCTGCTCAGCATCCGCTATGGCC...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGACTTAGTTGGGACCTaGGAGTTAAGTGCTGGATGG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSDLVGT*ELSAGW
Trigger: CCATCCAGCACTTAACTCTCAGGTCCCAACTAAGTC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCCACTGCTGGAGGCTTaGTGGGGCCCTGAGCATGCT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADPLLEA*WGPEHA
Trigger: AGCATGCTCAGGGCCCCAGCAAGCCTCCAGCAGTGG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR GCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCCACAGTTCCCATCAATaGAGGAGCCGTGGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFHSSHQ*RSRGPR
Trigger: GCGGGGGCCACGGCTCCTGCATTGATGGGAACTGTG...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTACGTGCCATGCCCACTaGACTGGTCTGGGCACTGGA +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFTCHAH*TGLGTG
Trigger: TCCAGTGCCCAGACCAGTGCAGTGGGCATGGCACGT...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAACGTGCCATGCCCACTaGACTGGTCTGGGCACTGGA +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGTCHAH*TGLGTG
Trigger: TCCAGTGCCCAGACCAGTGCAGTGGGCATGGCACGT...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGAGTTGGGATCGCAGCTaGAGAGGCCCGTGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSSWDRS*RGPCQA
Trigger: TGCCTGACACGGGCCTCTGCAGCTGCGATCCCAACT...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTGCGCTGGTCACACGCTaGGCCTGTCCAGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TSTETDTHELRNLNRLHPALVTR*ACPALF
Trigger: GAAGAGGGCTGGACAGGCGCAGCGTGTGACCAGCGC...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAATCTGTTTCGGTGCCTaGCGTTTGCCTACCAATGGT +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSICFGA*RLPTNG
Trigger: ACCATTGGTAGGCAAACGGCAGGCACCGAAACAGAT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTAGCTGGGACAGGAAATaGTCCGGCGGCGACCATTGC +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFSWDRK*SGGDHC
Trigger: GCAATGGTCGCCGCCGGAGCATTTCCTGTCCCAGCT...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACCAGGAACTTGGCAGTaGATGGGGCGTCCCGCAATG +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGPGTWQ*MGRPAM
Trigger: CATTGCGGGACGCCCCATGCACTGCCAAGTTCCTGG...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAAAAACATATAACTCCTaGTCTCCGGGGGATGCAGCC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSKTYNS*SPGDAA
Trigger: GGCTGCATCCCCCGGAGAGCAGGAGTTATATGTTTT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGGTGACGGGGCATaGCACTGCTGTCCCGACGGA +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAAGDGA*HCCPDG
Trigger: TCCGTCGGGACAGCAGTGGCATGCCCCGTCACCTGC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTGTGTGGACATGCTGTaGCGGGCCACGCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADCVDML*RATLGM
Trigger: CATGCCCAGCGTGGCCCGGCACAGCATGTCCACACA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGAGGGGGCCGGCTCCTTaGCCACGTTTTTCCACATGG +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSRGPAP*PRFSTW
Trigger: CCATGTGGAAAAACGTGGGCAAGGAGCCGGCCCCCT...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGTTGTTCAGCACAGATaGCACCTTGCGGCTATCTTC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSVVQHR*HLAAIF
Trigger: GAAGATAGCCGCAAGGTGGCATCTGTGCTGAACAAC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTCCGTCCCTGGCTTTCTaGTGCTCCTTGGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: TSTETDTHELRNLNRLHPPSLAF*CSLAQA
Trigger: GGCCTGGGCCAAGGAGCAGCAGAAAGCCAGGGACGG...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGGCCCTCGCGGATGTCTaGGTGTCGCTCACATGTGAA +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWALADV*VSLTCE
Trigger: TTCACATGTGAGCGACACGCAGACATCCGCGAGGGC...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAACCATCGGCGTAAGCTaGGAGTGGGCCGCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGTIGVS*EWAALR
Trigger: ACGAAGAGCGGCCCACTCCCAGCTTACGCCGATGGT...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAGGCAGCTGAGCAGATaGGAGGAGACTAGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWRQLSR*EETRRG
Trigger: TCCTCGCCTAGTCTCCTCCCATCTGCTCAGCTGCCT...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCTGCTGGAGGCTTGCTaGGGCCCTGAGCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADLLEAC*GPEHAL
Trigger: CAGAGCATGCTCAGGGCCCCAGCAAGCCTCCAGCAG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR CCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCCTGCTGGAGGCTTGCTaGGGCCCTGAGCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFLLEAC*GPEHAL
Trigger: CAGAGCATGCTCAGGGCCCCAGCAAGCCTCCAGCAG...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGTCGACTGGCTGTGGTaGTTCGGAGGGCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADVDWLW*FGGPLL
Trigger: CAGCAGTGGCCCTCCGAACCACCACAGCCAGTCGAC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGGCCTCAGAGTCGACTaGCTGTGGTGGTTCGGAGGG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADGLRVD*LWWFGG
Trigger: CCCTCCGAACCACCACAGCCAGTCGACTCTGAGGCC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGTGGTTGTGAGGGGGTaGGAGAGGGGGCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADVVVRG*ERGPQS
Trigger: ACTCTGAGGCCCCCTCTCCCACCCCCTCACAACCAC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCGGACTCTGGTGTGGTaGCCAGGTCATTGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADRTLVW*PGHWAL
Trigger: CAGCGCCCAATGACCTGGCCACCACACCAGAGTCCG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGGAACGGACTCTGGTGTaGTGGCCAGGTCATTGGGCG +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSERTLV*WPGHWA
Trigger: CGCCCAATGACCTGGCCACCACACCAGAGTCCGTTC...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGGGAGGGCCGCGGCAATaGCGGAGAGGGCAGCACATT +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVGGPRQ*RRGQHI
Trigger: AATGTGCTGCCCTCTCCGCCATTGCCGCGGCCCTCC...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACACAGACTCCGTGGCTaGAGCAGGTGGGATCCAAGC +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGHRLRG*SRWDPS
Trigger: GCTTGGATCCCACCTGCTCCAGCCACGGAGTCTGTG...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCACTGGTCTGGGCACTaGACCCTCGCCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADHWSGH*TLASSQ
Trigger: CTGTGAGCTGGCGAGGGTCCAGTGCCCAGACCAGTG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATGGGGCGCGTCACGTTaGTCAGGCGGCCTTCGTGGT +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAWGASR*SGGLRG
Trigger: ACCACGAAGGCCGCCTGACCAACGTGACGCGCCCCA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTGGTTACCACCCCCGTaGGGCGCGTCACGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADWLPPP*GASRWS
Trigger: TGACCAACGTGACGCGCCCCACGGGGGTGGTAACCA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCTGTCCTCTCGCTCATaGCCCCACGCTGAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADLSSRS*PHAEAQ
Trigger: CTGGGCTTCAGCGTGGGGCCATGAGCGAGAGGACAG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCGATGGAGGTGTGTGTaGACATGCTGTGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSRWRCV*TCCAGP
Trigger: TGGCCCGGCACAGCATGTCCACACACACCTCCATCG...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATCTTCAAGACACCAGTaGTCTCGTCATACCCGAAGG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSSSRHQ*SRHTRR
Trigger: CCTTCGGGTATGACGAGACCACTGGTGTCTTGAAGA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATTGACGGCCACGCTCTaGAGCTGCCCGTCCCCATCG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMALTATL*SCPSPS
Trigger: CGATGGGGACGGGCAGCTCCAGAGCGTGGCCGTCAA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGTTGACGGCCACGCTCTaGAGCTGCCCGTCCCCATCG +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVLTATL*SCPSPS
Trigger: CGATGGGGACGGGCAGCTCCAGAGCGTGGCCGTCAA...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGGCACATCCCCGAGTCTaGTTATCCGATCCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWAHPRV*LSDPGG
Trigger: ACCTCCGGGATCGGATAACCAGACTCGGGGATGTGC...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAAAGCCAATGACCATCTaGAAGTCGGGGTTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSKPMTI*KSGLES
Trigger: TGACTCCAACCCCGACTTCCAGATGGTCATTGGCTT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACCACGTTTTTCCACATaGTATAGTCTGGGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSPRFST*YSLGRS
Trigger: GGACCTCCCCAGACTATACCATGTGGAAAAACGTGG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACTTCGCTGGCGATGCTaGACACGCCCGTGGTCACCC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMALRWRC*TRPWSP
Trigger: GGGTGACCACGGGCGTGTCCAGCATCGCCAGCGAAG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTGCGGCTATCTTCGCTaGCGATGCTGGACACGCCCG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADCGYLR*RCWTRP
Trigger: CGGGCGTGTCCAGCATCGCCAGCGAAGATAGCCGCA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTGCGGCTATCTTCGCTaGCGATGCTGGACACGCCCG +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFCGYLR*RCWTRP
Trigger: CGGGCGTGTCCAGCATCGCCAGCGAAGATAGCCGCA...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATACCAGCAGCGTGGGCTaGGACACGGTCACGTTCACC +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADTSSVG*DTVTFT
Trigger: GGTGAACGTGACCGTGTCCCAGCCCACGCTGCTGGT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGCCCTCTGTCTCGCCTaGTCCAGGACGCGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRALCLA*SRTRAF
Trigger: GAAGGCCCGCGTCCTGGACCAGGCGAGACAGAGGGC...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAAGCTTTCTTGCCACTTaGTCTCCTAAAGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSSFLAT*SPKAAQ
Trigger: CTGGGCTGCTTTAGGAGACCAAGTGGCAAGAAAGCT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTTGGCGGACGAGTGGTaGTGGGACAGCGTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADLADEW*WDSVWL
Trigger: CAACCACACGCTGTCCCATCACCACTCGTCCGCCAA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAAACACGGCTTCATTCTaGACCAAGGTCTGTATGCTC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSNTASF*TKVCML
Trigger: GAGCATACAGACCTTGGTTCAGAATGAAGCCGTGTT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCCGGACAAAGCCACTaGGGTCACAGCTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAAGQSH*GHSWGW
Trigger: CCATCCCCAGCTGTGACCTCAGTGGCTTTGTCCGGC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGTCAGGCATGAGCAGGTaGCGGGGCATGCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVSGMSR*RGMPLL
Trigger: CAGCAGTGGCATGCCCCGTCACCTGCTCATGCCTGA...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGGTGTGGACACGACTTTaGGGCCTCCATTGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSVWTRL*GLHWCP
Trigger: TGGGCACCAATGGAGGCCTCAAAGTCGTGTCCACAC...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGTCCAATGGTGGGGGTaGTGGTGCCCGCTAGGACAT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADVQWWG*WCPLGH
Trigger: ATGTCCTAGCGGGCACCATCACCCCCACCATTGGAC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCTCATGGCCCCACGCTaGAGCCCAGCCAGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFLMAPR*SPARRP
Trigger: TGGGCGCCTGGCTGGGCTTCAGCGTGGGGCCATGAG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCGTCATACCCGAAGGTaGCGGCGGTACTGTCGTAGA +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSRHTRR*RRYCRR
Trigger: TCTACGACAGTACCGCCGTCACCTTCGGGTATGACG...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTCGTCATACCCGAAGGTaGCGGCGGTACTGTCGTAGA +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFRHTRR*RRYCRR
Trigger: TCTACGACAGTACCGCCGTCACCTTCGGGTATGACG...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCATACTGGACCTCCTTaGTCCGCCCATGGGTGTCGA +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSHTGPP*SAHGCR
Trigger: TCGACACCCATGGGCGGATCAAGGAGGTCCAGTATG...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACATACTGGACCTCCTTaGTCCGCCCATGGGTGTCGA +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGHTGPP*SAHGCR
Trigger: TCGACACCCATGGGCGGATCAAGGAGGTCCAGTATG...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGGTGGTGGCAAACCAGTaGCCTGCTTTCTCTCGGATG +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWVVANQ*PAFSRM
Trigger: CATCCGAGAGAAAGCAGGTCACTGGTTTGCCACCAC...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATGGTGGTGCCTAGTGTaGCCAGGTCGCCATCGGCTG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAWWCLV*PGRHRL
Trigger: CAGCCGATGGCGACCTGGTCACACTAGGCACCACCA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGGCCATAGCGGATGCTaGGCAGCAGCGTGGAGTACT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADGHSGC*AAAWST
Trigger: AGTACTCCACGCTGCTGCTCAGCATCCGCTATGGCC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCACCCCAGCCAGGGCTaGACAGGCATTCTCCATTCA +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSHPSQG*TGILHS
Trigger: TGAATGGAGAATGCCTGTGCAGCCCTGGCTGGGGTG...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATACGTGCCATGCCCACTaGACTGGTCTGGGCACTGGA +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADTCHAH*TGLGTG
Trigger: TCCAGTGCCCAGACCAGTGCAGTGGGCATGGCACGT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGTGTCAGGCAGGTACGTaGCATGCCCACTGCACTGGT +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSCQAGT*HAHCTG
Trigger: ACCAGTGCAGTGGGCATGGCACGTACCTGCCTGACA...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATTTGCCTACCAATGGTaGAGTGTTCACCATTCCAGC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSFAYQW*SVHHSS
Trigger: GCTGGAATGGTGAACACTGCACCATTGGTAGGCAAA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGGACTTCTGGAAGAGATaGCCCTCGACAGCCACCATC +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWDFWKR*PSTATI
Trigger: GATGGTGGCTGTCGAGGGGCATCTCTTCCAGAAGTC...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAACTGGTTTTCCCCAGTaGCTTTGTGTAGGATTCCAC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSTGFPQ*LCVGFH
Trigger: GTGGAATCCTACACAAAGGCACTGGGGAAAACCAGT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACGGGCTCATCAGGGTTaGATCTATGGCCTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGRAHQG*IYGLPS
Trigger: GGAGGGAAGGCCATAGATGCAACCCTGATGAGCCCG...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACCCATTCTTGTCTACTaGAATACCTCTCGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSPILVY*NTSRAH
Trigger: ATGAGCCCGAGAGGTATTGCAGTAGACAAGAATGGG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCCAGGAACTTGGCAGTaGATGGGGCGTCCCGCAATG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADPGTWQ*MGRPAM
Trigger: CATTGCGGGACGCCCCATGCACTGCCAAGTTCCTGG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGACGGGGCATGCCACTaGTGTCCCGACGGATCTTCA +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADDGACH*CPDGSS
Trigger: TGAAGATCCGTCGGGACAGCAGTGGCATGCCCCGTC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAAGGTGTGTGTGGACATaGTGTGCCGGGCCACGCTGG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMARCVWT*CAGPRW
Trigger: CCAGCGTGGCCCGGCACAGCATGTCCACACACACCT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGGGCAAACCAGTGACCTaGTTTCTCTCGGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWGKPVT*FLSDAG
Trigger: GCCAGCATCCGAGAGAAAGCAGGTCACTGGTTTGCC...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCCGCTCTCTAGCACCTTaGGGCCGATGGTGGTGCCTA +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFRSLAP*GRWWCL
Trigger: TAGGCACCACCATCGGCCGCAAGGTGCTAGAGAGCG...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATCCCTGGCTTTCTGCTaGTCCTTGGCCCAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMASLAFC*SLAQAV
Trigger: CACGGCCTGGGCCAAGGAGCAGCAGAAAGCCAGGGA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGCCGTCCCTGGCTTTCTaGTGCTCCTTGGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRPSLAF*CSLAQA
Trigger: GGCCTGGGCCAAGGAGCAGCAGAAAGCCAGGGACGG...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTATCCCTCGTACCCTTaGACGCGCCCGGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFYPSYP*TRPVLR
Trigger: TCTGAGCACCGGGCGCGTGCAAGGGTACGAGGGATA...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACACTTTGCCTCCAGATaGCATTGTTGCCACATCATC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSHFASR*HCCHII
Trigger: GATGATGTGGCAACAATGCCATCTGGAGGCAAAGTG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTGCTCCGGCGTTCCCTaGGAGACTCAACCACACTCC +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADCSGVP*ETQPHS
Trigger: GGAGTGTGGTTGAGTCTCCCAGGGAACGCCGGAGCA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTGCTCCGGCGTTCCCTaGGAGACTCAACCACACTCC +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFCSGVP*ETQPHS
Trigger: GGAGTGTGGTTGAGTCTCCCAGGGAACGCCGGAGCA...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACACCCACTGCACTGGTCTaGGCACTGGACCCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTPTALV*ALDPRQ
Trigger: CTGGCGAGGGTCCAGTGCCCAGACCAGTGCAGTGGG...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACGGGACCCATCCAGTTaGGATCGCAGCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMARDPSS*DRSCRG
Trigger: GCCTCTGCAGCTGCGATCCCAACTGGATGGGTCCCG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATCAATGCAGCGGGGGTaGCACACGCGCTGGTCACAC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMASMQRG*HTRWSH
Trigger: GTGTGACCAGCGCGTGTGCCACCCCCGCTGCATTGA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGCACAGGAAGTTTCCATaGCAACGTTGCATCCGGGCC +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWHRKFP*QRCIRA
Trigger: GGCCCGGATGCAACGTTGCCATGGAAACTTCCTGTG...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAAGTCCATACACCCTTTaGCCATACGCATCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSSPYTL*PYASVL
Trigger: CAAGACAGATGCGTATGGCCAAAGGGTGTATGGACT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATACCAGCCACCGAGGTTaGAGGGGTCCAGCTCGAATC +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADTSHRG*RGPARI
Trigger: GATTCGAGCTGGACCCCTCCAACCTCGGTGGCTGGT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACAACCTTCCGGATCATaGTGGCATCGACAAAGTACA +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSQPSGS*WHRQST
Trigger: TGTACTTTGTCGATGCCACCATGATCCGGAAGGTTG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAATGGGGAATTCAAGATaGCATCAGTCGCGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSMGNSR*HQSRRH
Trigger: ATGCCTACGCGACTGATGCCATCTTGAATTCCCCAT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGCTGTTTCATCGCTCTTaGTGGCCAGGAGCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWLFHRS*WPGAQC
Trigger: ACACTGGGCTCCTGGCCACCAAGAGCGATGAAACAG...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCTGCCAGCCCGCTGCTaGGCAGCCAGAGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFLPARC*AARGRG
Trigger: GCCCCTTCCTCTGGCTGCCCAGCAGCGGGCTGGCAG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGCTGTCCTCTCGCTCATaGCCCCACGCTGAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVLSSRS*PHAEAQ
Trigger: CTGGGCTTCAGCGTGGGGCCATGAGCGAGAGGACAG...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCCGATGGAGGTGTGTGTaGACATGCTGTGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFRWRCV*TCCAGP
Trigger: TGGCCCGGCACAGCATGTCCACACACACCTCCATCG...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAAGCAGCGTGGAGTACTaGAACTCAATGTTCGTGAAC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSSSVEY*NSMFVN
Trigger: GTTCACGAACATTGAGTTCCAGTACTCCACGCTGCT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCCGAGTTTTCACGACTaGACAGGCCGGAACTGCGCC +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADPSFHD*TGRNCA
Trigger: GGCGCAGTTCCGGCCTGTCCAGTCGTGAAAACTCGG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS-3UTR CCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGGTCGACTGGCTGTGGTaGTTCGGAGGGCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVVDWLW*FGGPRD
Trigger: GTCTCTGGGCCCTCCGAACCACCACAGCCAGTCGAC...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520394.5
CDS-3UTR TCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCACTCACAGACTGAGGTaGGGTACTGCCGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFTHRLR*GTAGSP
Trigger: TGGAGACCCGGCAGTACCTCACCTCAGTCTGTGAGT...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATCCCCGAGGAGGTCTTaGAGAGGAAGTGCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMASPRRS*RGSAGS
Trigger: AGACCCGGCACTTCCTCTTCAAGACCTCCTCGGGGA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTGAAGGATCGATGCACTaGTTCATGGGCACGTCGCAC +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFEGSMH*FMGTSH
Trigger: GTGCGACGTGCCCATGAATCAGTGCATCGATCCTTC...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGCCGATGCAGACGCCGTaGGTGCCACAGTCTACTGAG +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVPMQTP*VPQSTE
Trigger: CTCAGTAGACTGTGGCACTCACGGCGTCTGCATCGG...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACACTGCCAGCTGTTCTaGCCCAGTGTGCATCTCCCG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAHCQLF*PSVHLP
Trigger: CGGGAGATGCACACTGGGTCAGAACAGCTGGCAGTG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGATCCAGCTCGAATCCCTaGAGGAGGGCTGTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGSSSNP*RRAVLF
Trigger: GAAAAGGACAGCCCTCCTTCAGGGATTCGAGCTGGA...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGTTCCACTCAGAGACTTaGCGCGGTAGATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWFHSET*RGRFSC
Trigger: GCAGGAGAATCTACCGCGTCAAGTCTCTGAGTGGAA...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGCGGCCGGACGGCAGTaGGGTCATTGGAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFAAGRQ*GHWSPA
Trigger: TGCTGGGCTCCAATGACCTCACTGCCGTCCGGCCGC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGGTCCAATGGTGGGGGTaGTGGTGCCCGCTAGGACAT +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVVQWWG*WCPLGH
Trigger: ATGTCCTAGCGGGCACCATCACCCCCACCATTGGAC...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCAGAAGTATGACACGTTaGCAGCTGCCAGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFRSMTR*QLPARC
Trigger: GCAGCGGGCTGGCAGCTGTCAACGTGTCATACTTCT...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCCACGCTGGGCATGGTaGCGGCAAGGAGGCGGTCAG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFPRWAW*RQGGGQ
Trigger: CTGACCGCCTCCTTGCCGTCACCATGCCCAGCGTGG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCAATCTTCCGGTACCTaGTGGTGCAGGAGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADQSSGT*WCRRSP
Trigger: GGGGCTTCTCCTGCACCATCAGGTACCGGAAGATTG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACATAGCGCAAGGGCATaGGGCGCACACTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAHSARA*GAHCCL
Trigger: CAGGCAACAGTGTGCGCCTCATGCCCTTGCGCTATG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGCATAGCGCAAGGGCATaGGGCGCACACTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVHSARA*GAHCCL
Trigger: CAGGCAACAGTGTGCGCCTCATGCCCTTGCGCTATG...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGGATTGTAGACATGGGTaGTGCGCGTCGGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSDCRHG*CASGCG
Trigger: TCCACAACCCGACGCGCATCACCCATGTCTACAATC...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATTGAGTCCGAGCAGATaGATTGCTATGAAATACGCC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSLSPSR*IAMKYA
Trigger: GGCGTATTTCATAGCAATGCATCTGCTCGGACTCAA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR GCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACGACCAGGGCACTTTaGCTCCAGATGGCATTGTTG +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWTTRAL*LQMALL
Trigger: CAACAATGCCATCTGGAGGCAAAGTGCCCTGGTCGT...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCGAACCAAGGTCTGTATaGTCCGGCGTTCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFEPRSV*SGVPWE
Trigger: CTCCCAGGGAACGCCGGAGCATACAGACCTTGGTTC...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGCAGGTACGTGCCATaGCCACTGCACTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRGRYVP*PLHWSG
Trigger: CCCAGACCAGTGCAGTGGGCATGGCACGTACCTGCC...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTGTCAGGCAGGTACGTaGCATGCCCACTGCACTGGT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADCQAGT*HAHCTG
Trigger: ACCAGTGCAGTGGGCATGGCACGTACCTGCCTGACA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTTGCAGACGCCGTGAGTaGCACAGTCTACTGAGCACA +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFCRRRE*HSLLST
Trigger: TGTGCTCAGTAGACTGTGGCACTCACGGCGTCTGCA...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTTTCCATGGCAACGTTaGATCCGGGCCCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADFPWQR*IRALSS
Trigger: GCTGGAGAGGGCCCGGATGCAACGTTGCCATGGAAA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTATAGAAGGACTTCACTaGGGGCCAATCCGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFIEGLH*GPIRLA
Trigger: GGCCAGACGGATTGGCCCGCAGTGAAGTCCTTCTAT...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTTCAAAGGGTAGACACTaGTCTCCCGTCCCTGCCACA +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFSKGRH*SPVPAT
Trigger: TGTGGCAGGGACGGGAGAGCAGTGTCTACCCTTTGA...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ACTACGGAATCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGCAGGTGACGGGGCATaGCACTGCTGTCCCGACGGA +
Preference number: 4 (lower is better)
Translates to: TTESKQTTPCNCVLLSTMAGDGA*HCCPDG
Trigger: TCCGTCGGGACAGCAGTGGCATGCCCCGTCACCTGC...CATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGATTCCGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTTTCTCCATTTCCCGGTaGAGACTGGTTACCACCCCC +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFFSISR*RLVTTP
Trigger: GGGGGTGGTAACCAGTCTGCACCGGGAAATGGAGAA...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCAGCTGCCAGCCCGCTaGTGGGCAGCCAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFQLPAR*WAARGR
Trigger: CCTTCCTCTGGCTGCCCAGCAGCGGGCTGGCAGCTG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGGACACGATGCGGCCTTaGTTGTCGATGTCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSDTMRP*LSMSVL
Trigger: GAGGACAGACATCGACAAGCAAGGCCGCATCGTGTC...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATCCCGTCAGCGAACATaGGGGACACGATGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMASRQRT*GTRCGL
Trigger: AAGGCCGCATCGTGTCCCGCATGTTCGCTGACGGGA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTACACCTGGCGTCCGGTaGCCAAAAAGGAGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFTPGVR*PKRRSS
Trigger: TGAAGACCTCCTTTTTGGGCACCGGACGCCAGGTGT...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTGACGGGCTTGATGCTTaGGATGCGGAAGCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFDGLDA*DAEAVV
Trigger: GACAACAGCTTCCGCATCGCAAGCATCAAGCCCGTC...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAAGGGGGCCGGCTCCTTaGCCACGTTTTTCCACATGG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMARGPAP*PRFSTW
Trigger: CCATGTGGAAAAACGTGGGCAAGGAGCCGGCCCCCT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGAGGGGGCCGGCTCCTTaGCCACGTTTTTCCACATGG +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVRGPAP*PRFSTW
Trigger: CCATGTGGAAAAACGTGGGCAAGGAGCCGGCCCCCT...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATCTTCGCTGGCGATaGTGGACACGCCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADYLRWR*WTRPWS
Trigger: TGACCACGGGCGTGTCCAGCATCGCCAGCGAAGATA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCGCACAGATGCCACCTTaGGGCTATCTTCGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFAQMPP*GYLRWR
Trigger: TCGCCAGCGAAGATAGCCGCAAGGTGGCATCTGTGC...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACGCTCTCTAGCACCTTaGGGCCGATGGTGGTGCCTA +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMARSLAP*GRWWCL
Trigger: TAGGCACCACCATCGGCCGCAAGGTGCTAGAGAGCG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATATCCCTCGTACCCTTaGACGCGCCCGGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAYPSYP*TRPVLR
Trigger: TCTGAGCACCGGGCGCGTGCAAGGGTACGAGGGATA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAACCATCGGCGTAAGCTaGGAGTGGGCCGCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMATIGVS*EWAALR
Trigger: ACGAAGAGCGGCCCACTCCCAGCTTACGCCGATGGT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGAACGGACTCTGGTGTaGTGGCCAGGTCATTGGGCG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAERTLV*WPGHWA
Trigger: CGCCCAATGACCTGGCCACCACACCAGAGTCCGTTC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGTCAATGCAGGAGCCGTaGCCCCCGCAGGAAGGATCG +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRSMQEP*PPQEGS
Trigger: CGATCCTTCCTGCGGGGGCCACGGCTCCTGCATTGA...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGCGTGGCTGGAGCAGGTaGGATCCAAGCAATCAACTT +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWRGWSR*DPSNQL
Trigger: AAGTTGATTGCTTGGATCCCACCTGCTCCAGCCACG...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACACAGACTCCGTGGCTaGAGCAGGTGGGATCCAAGC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAHRLRG*SRWDPS
Trigger: GCTTGGATCCCACCTGCTCCAGCCACGGAGTCTGTG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTTCACACAGACTCCGTaGCTGGAGCAGGTGGGATCC +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADFTQTP*LEQVGS
Trigger: GGATCCCACCTGCTCCAGCCACGGAGTCTGTGTGAA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACACGGGACCCATCCAGTTaGGATCGCAGCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTRDPSS*DRSCRG
Trigger: GCCTCTGCAGCTGCGATCCCAACTGGATGGGTCCCG...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGGGTGGCACACGCGCTaGTCACACGCTGCGCCTGTC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFGWHTR*SHAAPV
Trigger: GACAGGCGCAGCGTGTGACCAGCGCGTGTGCCACCC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACATCAATGCAGCGGGGGTaGCACACGCGCTGGTCACAC +
Preference number: 4 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTSMQRG*HTRWSH
Trigger: GTGTGACCAGCGCGTGTGCCACCCCCGCTGCATTGA...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGTCTCCAGGAATGATGTaGGTGCTATCCTTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWSPGMM*VLSLPA
Trigger: GGCAGGCAAGGATAGCACCCACATCATTCCTGGAGA...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAAGGGGCACTGTGGACTaGGTCATGGTGATCTTCAGC +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGRGTVD*VMVIFS
Trigger: GCTGAAGATCACCATGACCCAGTCCACAGTGCCCCT...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAACCAGCCACCGAGGTTaGAGGGGTCCAGCTCGAATC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMATSHRG*RGPARI
Trigger: GATTCGAGCTGGACCCCTCCAACCTCGGTGGCTGGT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGTTTCCCGGTGCAGACTaGTTACCACCCCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRFPGAD*LPPPWG
Trigger: GCCCCACGGGGGTGGTAACCAGTCTGCACCGGGAAA...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACGTCATCATCACGGTTaGAGTTCTCAATGTCAATGG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSRHHHG*SSQCQW
Trigger: CCATTGACATTGAGAACTCCAACCGTGATGATGACG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTCCACATGGTATAGTCTaGGGAGGTCCATCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFPHGIV*GGPSSC
Trigger: GCAGGACGATGGACCTCCCCAGACTATACCATGTGG...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGCCCTCTGTCTCGCCTaGTCCAGGACGCGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFALCLA*SRTRAF
Trigger: GAAGGCCCGCGTCCTGGACCAGGCGAGACAGAGGGC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGCCTCTCTCCCGTCCCTaGCTTTCTGCTGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVPLSRP*LSAAPW
Trigger: CCAAGGAGCAGCAGAAAGCCAGGGACGGGAGAGAGG...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGTACAAGCAGTCTGAGTaGTTTGTCCCGCAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWYKQSE*FVPQLV
Trigger: GACCAGCTGCGGGACAAACCACTCAGACTGCTTGTA...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGAGAGTCGACTGGCTGTaGTGGTTCGGAGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVRVDWL*WFGGPR
Trigger: TCTGGGCCCTCCGAACCACCACAGCCAGTCGACTCT...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520394.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCCCTGAGCATGCTCTaGGCAGGTATGAATTGGGGG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAALSML*AGMNWG
Trigger: CCCCCAATTCATACCTGCTCAGAGCATGCTCAGGGC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCCGGGGAAGAGCTGCTaGACAAGGGTGTGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFPGKSC*TRVCSP
Trigger: CGGGGAGCACACCCTTGTTCAGCAGCTCTTCCCCGG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCCGTGTAAACCGTTCCTaGGGTCAAAGGGTATCCCGG +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFRVNRS*GQRVSR
Trigger: CCGGGATACCCTTTGACCTCAGGAACGGTTTACACG...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAGAACTGGGGCTGACTaGTGTGAATTTGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWRTGAD*CEFVTS
Trigger: GGAGGTCACAAATTCACATCAGTCAGCCCCAGTTCT...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGTCCCGAGGGAGATGTTaGACTTTAAGAACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWSRGRC*TLRTGA
Trigger: AGCCCCAGTTCTTAAAGTTCAACATCTCCCTCGGGA...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGAAGGATCGATGCACTaGTTCATGGGCACGTCGCAC +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADEGSMH*FMGTSH
Trigger: GTGCGACGTGCCCATGAATCAGTGCATCGATCCTTC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGGGTTCTCTCCAGGAATaGTGTGGGTGCTATCCTTGC +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSGSLQE*CGCYPC
Trigger: GCAAGGATAGCACCCACATCATTCCTGGAGAGAACC...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTCTACTTGGCCTCGGATaGGAGAAACCAAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFLLGLG*EKPSCC
Trigger: ACAGCAGCTTGGTTTCTCTCATCCGAGGCCAAGTAG...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAGCTCGATTTCTTCATaGAGAACCTGGGTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWSSISS*RTWVSG
Trigger: GCCTGAGACCCAGGTTCTTCATGAAGAAATCGAGCT...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGTGCCATCATAGGTCATaGGACCAAGCTCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWCHHRS*DQAPGS
Trigger: AGAACCTGGAGCTTGGTCTCATGACCTATGATGGCA...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTGTCGAAGTGTTTGCTaGGGGTCATCACGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADCRSVC*GSSRQW
Trigger: CCACTGCCGTGATGACCCTCAGCAAACACTTCGACA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACATACTGGACCTCCTTaGTCCGCCCATGGGTGTCGA +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAHTGPP*SAHGCR
Trigger: TCGACACCCATGGGCGGATCAAGGAGGTCCAGTATG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACCCCATGGAAGCCAATaGCCATCTGGAAGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAPHGSQ*PSGSRG
Trigger: ACCCCGACTTCCAGATGGTCATTGGCTTCCATGGGG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTCCCCATGGAAGCCAATaGCCATCTGGAAGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: TSTETDTHELRNLNRLHPPHGSQ*PSGSRG
Trigger: ACCCCGACTTCCAGATGGTCATTGGCTTCCATGGGG...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAGGAACTCAATGTTCGTaGACCTTCGAGTCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGGTQCS*TFESCR
Trigger: ACGGCAGGACTCGAAGGTTCACGAACATTGAGTTCC...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGCCCACATCCAGGTACTaGACAAACACGGCTTCATTC +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWPTSRY*TNTASF
Trigger: GAATGAAGCCGTGTTTGTGCAGTACCTGGATGTGGG...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTCGCAGGAAGGATCGATaGACTGATTCATGGGCACGT +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFRRKDR*TDSWAR
Trigger: ACGTGCCCATGAATCAGTGCATCGATCCTTCCTGCG...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCGCAGGAAGGATCGATaGACTGATTCATGGGCACGT +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSRRKDR*TDSWAR
Trigger: ACGTGCCCATGAATCAGTGCATCGATCCTTCCTGCG...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGAGTTGGGATCGCAGCTaGAGAGGCCCGTGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRSWDRS*RGPCQA
Trigger: TGCCTGACACGGGCCTCTGCAGCTGCGATCCCAACT...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAAGCCATCTGTTTCGGTaGCTGCCGTTTGCCTACCAA +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGSHLFR*LPFAYQ
Trigger: TTGGTAGGCAAACGGCAGGCACCGAAACAGATGGCT...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTTGTTCTGACCCAGTGTaGATCTCCCGTTACCGTTGC +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFCSDPV*ISRYRC
Trigger: GCAACGGTAACGGGAGATGCACACTGGGTCAGAACA...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGATGTTCTGACCCAGTGTaGATCTCCCGTTACCGTTGC +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGCSDPV*ISRYRC
Trigger: GCAACGGTAACGGGAGATGCACACTGGGTCAGAACA...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATTTCCATGGCAACGTTaGATCCGGGCCCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAFPWQR*IRALSS
Trigger: GCTGGAGAGGGCCCGGATGCAACGTTGCCATGGAAA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATATAGAAGGACTTCACTaGGGGCCAATCCGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADIEGLH*GPIRLA
Trigger: GGCCAGACGGATTGGCCCGCAGTGAAGTCCTTCTAT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCGGAAGCACCTCCATTTaGGATCAGGTCGAACGTGCC +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFGSTSI*DQVERA
Trigger: GGCACGTTCGACCTGATCGCAAATGGAGGTGCTTCC...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGACTTCTGGAAGAGATaGCCCTCGACAGCCACCATC +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADDFWKR*PSTATI
Trigger: GATGGTGGCTGTCGAGGGGCATCTCTTCCAGAAGTC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGAGCTGGGACAGGAAATaGTCCGGCGGCGACCATTGC +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRSWDRK*SGGDHC
Trigger: GCAATGGTCGCCGCCGGAGCATTTCCTGTCCCAGCT...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGGACACGGGGTCCACTaGCAAGTAGTACTTGTGTGC +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADGHGVH*QVVLVC
Trigger: GCACACAAGTACTACTTGGCAGTGGACCCCGTGTCC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACTGCTCTCCCGTCCCTaGCACAACTTCCGAATTCCC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMALLSRP*HNFRIP
Trigger: GGGAATTCGGAAGTTGTGGCAGGGACGGGAGAGCAG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCAAAGGGTAGACACTaGTCTCCCGTCCCTGCCACA +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFSKGRH*SPVPAT
Trigger: TGTGGCAGGGACGGGAGAGCAGTGTCTACCCTTTGA...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACGGGCTCATCAGGGTTaGATCTATGGCCTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMARAHQG*IYGLPS
Trigger: GGAGGGAAGGCCATAGATGCAACCCTGATGAGCCCG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTCGGGCTCATCAGGGTTaGATCTATGGCCTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: TSTETDTHELRNLNRLHPRAHQG*IYGLPS
Trigger: GGAGGGAAGGCCATAGATGCAACCCTGATGAGCCCG...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCTGCTCTCCGGGGGATaGAGCCTCATACTGGTTGAA +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADLLSGG*SLILVE
Trigger: TTCAACCAGTATGAGGCTGCATCCCCCGGAGAGCAG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTAGGAGGTCTTCAGGATaGGGCCGTCATCACTGTAGT +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFRRSSG*GRHHCS
Trigger: ACTACAGTGATGACGGCCGCATCCTGAAGACCTCCT...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATACACCTGGCGTCCGGTaGCCAAAAAGGAGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADTPGVR*PKRRSS
Trigger: TGAAGACCTCCTTTTTGGGCACCGGACGCCAGGTGT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCACAGATGCCACCTTaGGGCTATCTTCGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAAQMPP*GYLRWR
Trigger: TCGCCAGCGAAGATAGCCGCAAGGTGGCATCTGTGC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTGCACAGATGCCACCTTaGGGCTATCTTCGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: TSTETDTHELRNLNRLHPAQMPP*GYLRWR
Trigger: TCGCCAGCGAAGATAGCCGCAAGGTGGCATCTGTGC...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCCGTCCCTGGCTTTCTaGTGCTCCTTGGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFPSLAF*CSLAQA
Trigger: GGCCTGGGCCAAGGAGCAGCAGAAAGCCAGGGACGG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGGGCGTAAGCTGGGAGTaGGCCGCTCTTCGTTTTGTG +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVGVSWE*AALRFV
Trigger: CACAAAACGAAGAGCGGCCCACTCCCAGCTTACGCC...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAAGGCAGCTGAGCAGATaGGAGGAGACTAGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMARQLSR*EETRRG
Trigger: TCCTCGCCTAGTCTCCTCCCATCTGCTCAGCTGCCT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR CCA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAGAGTCGACTGGCTGTaGTGGTTCGGAGGGCCACTG +
Preference number: 4 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTRVDWL*WFGGPL
Trigger: CAGTGGCCCTCCGAACCACCACAGCCAGTCGACTCT...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp ACTACGGAATCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGCGGACTCTGGTGTGGTaGCCAGGTCATTGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: TTESKQTTPCNCVLLSTMRTLVW*PGHWAL
Trigger: CAGCGCCCAATGACCTGGCCACCACACCAGAGTCCG...CATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGATTCCGTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCGATGCACTGATTCATaGGCACGTCGCACTCTGCAC +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADRCTDS*ARRTLH
Trigger: GTGCAGAGTGCGACGTGCCCATGAATCAGTGCATCG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATTCACACAGACTCCGTaGCTGGAGCAGGTGGGATCC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAFTQTP*LEQVGS
Trigger: GGATCCCACCTGCTCCAGCCACGGAGTCTGTGTGAA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTTCTCCAGGAATGATGTaGGTGCTATCCTTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFSPGMM*VLSLPA
Trigger: GGCAGGCAAGGATAGCACCCACATCATTCCTGGAGA...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTTCACCAGGGTGTCCATaGCGTAAAAGCTGTTCCACG +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFSPGCP*RKSCST
Trigger: CGTGGAACAGCTTTTACGCCATGGACACCCTGGTGA...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGACCAGCCACCGAGGTTaGAGGGGTCCAGCTCGAATC +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRTSHRG*RGPARI
Trigger: GATTCGAGCTGGACCCCTCCAACCTCGGTGGCTGGT...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATTAACATTGAGGATGTaGTGTTTGTCTAGGGACCAG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSLTLRM*CLSRDQ
Trigger: CTGGTCCCTAGACAAACACCACATCCTCAATGTTAA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTAGATTCTCCTGCTGTTaGTGTCGGACACGTAGAGCG +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFRFSCC*CRTRRA
Trigger: CGCTCTACGTGTCCGACACCAACAGCAGGAGAATCT...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTCACTCCAGACGAACCTaGGCTACATCCATGCTGGAA +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFHSRRT*ATSMLE
Trigger: TTCCAGCATGGATGTAGCCCAGGTTCGTCTGGAGTG...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGATGCAGCCTCATACTaGTTGAAGGCATTAAGAACA +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSDAASY*LKALRT
Trigger: TGTTCTTAATGCCTTCAACCAGTATGAGGCTGCATC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAGTGAGGGTGATGATCTaGTTGTCAGGCATGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGVRVMI*LSGMSR
Trigger: CCTGCTCATGCCTGACAACCAGATCATCACCCTCAC...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCTGTTTCATCGCTCTTaGTGGCCAGGAGCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADLFHRS*WPGAQC
Trigger: ACACTGGGCTCCTGGCCACCAAGAGCGATGAAACAG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCGGAACATCTCATACTaGACCTCCTTGATCCGCCCA +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSRNISY*TSLIRP
Trigger: TGGGCGGATCAAGGAGGTCCAGTATGAGATGTTCCG...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCACATCCCCGAGTCTaGTTATCCGATCCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAAHPRV*LSDPGG
Trigger: ACCTCCGGGATCGGATAACCAGACTCGGGGATGTGC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGGCACATCCCCGAGTCTaGTTATCCGATCCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVAHPRV*LSDPGG
Trigger: ACCTCCGGGATCGGATAACCAGACTCGGGGATGTGC...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGGGACACTCCACCCGCTaGCCTTGTTGTAGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVGHSTR*PCCRLL
Trigger: CAAGAGCCTACAACAAGGCCAGCGGGTGGAGTGTCC...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCCCACATGGTATAGTCTaGGGAGGTCCATCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFPHGIV*GGPSSC
Trigger: GCAGGACGATGGACCTCCCCAGACTATACCATGTGG...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGCCACGTTTTTCCACATaGTATAGTCTGGGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWPRFST*YSLGRS
Trigger: GGACCTCCCCAGACTATACCATGTGGAAAAACGTGG...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCTTCGCTGGCGATGCTaGACACGCCCGTGGTCACCC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFLRWRC*TRPWSP
Trigger: GGGTGACCACGGGCGTGTCCAGCATCGCCAGCGAAG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATAGGCGAGGATGTAGGTaGAATGGGACGACCGTTCTC +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADRRGCR*NGTTVL
Trigger: GAGAACGGTCGTCCCATTCCACCTACATCCTCGCCT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS-3UTR TCA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAGCCCTGAGCATGCTCTaGGCAGGTATGAATTGGGGG +
Preference number: 4 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTALSML*AGMNWG
Trigger: CCCCCAATTCATACCTGCTCAGAGCATGCTCAGGGC...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGCCGCCGATTGGTCAGTaGGTTCCTGTTGAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVPPIGQ*VPVEGV
Trigger: AACTCCCTCAACAGGAACTCACTGACCAATCGGCGG...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACGTGTAAACCGTTCCTaGGGTCAAAGGGTATCCCGG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMARVNRS*GQRVSR
Trigger: CCGGGATACCCTTTGACCTCAGGAACGGTTTACACG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGCGTGTAAACCGTTCCTaGGGTCAAAGGGTATCCCGG +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVRVNRS*GQRVSR
Trigger: CCGGGATACCCTTTGACCTCAGGAACGGTTTACACG...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGCTGGAGTTGCCAATTaGGTCCGAGCAGATGCATTG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADAGVAN*VRADAL
Trigger: CAATGCATCTGCTCGGACTCAATTGGCAACTCCAGC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR TCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACTGATGTGAATTTGTaGCCTCCAAAACACCCCTGG +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWTDVNL*PPKHPW
Trigger: CCAGGGGTGTTTTGGAGGTCACAAATTCACATCAGT...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATAATCCTGGGAAACAGTaGCACACCCCGGACACACAT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADNPGKQ*HTPDTH
Trigger: ATGTGTGTCCGGGGTGTGTCACTGTTTCCCAGGATT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCAATCCTGGGAAACAGTaGCACACCCCGGACACACAT +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFNPGKQ*HTPDTH
Trigger: ATGTGTGTCCGGGGTGTGTCACTGTTTCCCAGGATT...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGAGCTCGATTTCTTCATaGAGAACCTGGGTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSSSISS*RTWVSG
Trigger: GCCTGAGACCCAGGTTCTTCATGAAGAAATCGAGCT...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTTCCACTCAGAGACTTaGCGCGGTAGATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADFHSET*RGRFSC
Trigger: GCAGGAGAATCTACCGCGTCAAGTCTCTGAGTGGAA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTTCTCATCTGTCTCAGTaGTGTAGAGGACCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFSHLSQ*CRGPQC
Trigger: ACACTGGGGTCCTCTACATCACTGAGACAGATGAGA...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTCAGGCATGAGCAGGTaGCGGGGCATGCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFSGMSR*RGMPLL
Trigger: CAGCAGTGGCATGCCCCGTCACCTGCTCATGCCTGA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAGTGTGGACACGACTTTaGGGCCTCCATTGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTVWTRL*GLHWCP
Trigger: TGGGCACCAATGGAGGCCTCAAAGTCGTGTCCACAC...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGTAGGAGGCCTCTACTaGAGAGAGGTTGGTGATGAC +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADVGGLY*REVGDD
Trigger: GTCATCACCAACCTCTCTTCAGTAGAGGCCTCCTAC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTCCCATTGAAGAAGTATaGCACGTTGACAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFPIEEV*HVDSCQ
Trigger: CTGGCAGCTGTCAACGTGTCATACTTCTTCAATGGG...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CCTTCTTTCTTATCTTCGCTTCTTTGTTTATTGGTCCGTGTGTTTGTTTTGTTTCTCATGGCCCCACGCTaGAGCCCAGCCAGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: PSFLSSLLCLLVRVFVLFLMAPR*SPARRP
Trigger: TGGGCGCCTGGCTGGGCTTCAGCGTGGGGCCATGAG...AAACAAAACAAACACACGGACCAATAAACAAAGAAGCGAAGATAAGAAAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACACAATCTTCCGGTACCTaGTGGTGCAGGAGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTQSSGT*WCRRSP
Trigger: GGGGCTTCTCCTGCACCATCAGGTACCGGAAGATTG...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTTGTCGAAGTGTTTGCTaGGGGTCATCACGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: TSTETDTHELRNLNRLHPCRSVC*GSSRQW
Trigger: CCACTGCCGTGATGACCCTCAGCAAACACTTCGACA...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGATTGTAGACATGGGTaGTGCGCGTCGGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMADCRHG*CASGCG
Trigger: TCCACAACCCGACGCGCATCACCCATGTCTACAATC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTCATAATCACGCTGAGTaGAGTGGACCAGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFHNHAE*SGPAWS
Trigger: TGACCAAGCTGGTCCACTTCACTCAGCGTGATTATG...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAATGATGTTGCTAAGCTaGAATCCAAACATCACAAGC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSMMLLS*NPNITS
Trigger: GCTTGTGATGTTTGGATTTCAGCTTAGCAACATCAT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGTCCTTCCAGAGCCATaGAGGCCTGGTTATGTCTCT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADVLPEP*RPGYVS
Trigger: AGAGACATAACCAGGCCTTCATGGCTCTGGAAGGAC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGTGGTGGCAAACCAGTaGCCTGCTTTCTCTCGGATG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAVVANQ*PAFSRM
Trigger: CATCCGAGAGAAAGCAGGTCACTGGTTTGCCACCAC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGGAACTCAATGTTCGTaGACCTTCGAGTCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADGTQCS*TFESCR
Trigger: ACGGCAGGACTCGAAGGTTCACGAACATTGAGTTCC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGACTGAGGTGAGGTACTaGCGGGTCTCCATAAGAGAT +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSTEVRY*RVSIRD
Trigger: ATCTCTTATGGAGACCCGGCAGTACCTCACCTCAGT...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCCACTGCTGGAGGCTTaGTGGGGCCCTGAGCATGCT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFPLLEA*WGPEHA
Trigger: AGCATGCTCAGGGCCCCAGCAAGCCTCCAGCAGTGG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTCTCCAGTGGCACGTTaGTGTTTAGCACCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADSPVAR*CLAPSC
Trigger: ACAGCTGGGTGCTAAACAGCAACGTGCCACTGGAGA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCTGCAGGCTGGAGTTaGCAATTGAGTCCGAGCAGA +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFSAGWS*QLSPSR
Trigger: TCTGCTCGGACTCAATTGGCAACTCCAGCCTGCAGA...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGCACCCCAGCCAGGGCTaGACAGGCATTCTCCATTCA +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRHPSQG*TGILHS
Trigger: TGAATGGAGAATGCCTGTGCAGCCCTGGCTGGGGTG...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGGCAGGTACGTGCCATaGCCACTGCACTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFGRYVP*PLHWSG
Trigger: CCCAGACCAGTGCAGTGGGCATGGCACGTACCTGCC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGTGTCAGGCAGGTACGTaGCATGCCCACTGCACTGGT +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRCQAGT*HAHCTG
Trigger: ACCAGTGCAGTGGGCATGGCACGTACCTGCCTGACA...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATGCAGACGCCGTGAGTaGCACAGTCTACTGAGCACA +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMACRRRE*HSLLST
Trigger: TGTGCTCAGTAGACTGTGGCACTCACGGCGTCTGCA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGATCTGTTTCGGTGCCTaGCGTTTGCCTACCAATGGT +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSICFGA*RLPTNG
Trigger: ACCATTGGTAGGCAAACGGCAGGCACCGAAACAGAT...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATATCTCCCGTTACCGTTaGACAAGTCAGGGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADISRYR*TSQGSH
Trigger: ATGGCTGCCCTGACTTGTGCAACGGTAACGGGAGAT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCATCTCCCGTTACCGTTaGACAAGTCAGGGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFISRYR*TSQGSH
Trigger: ATGGCTGCCCTGACTTGTGCAACGGTAACGGGAGAT...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAATAGAAGGACTTCACTaGGGGCCAATCCGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAIEGLH*GPIRLA
Trigger: GGCCAGACGGATTGGCCCGCAGTGAAGTCCTTCTAT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGCACGATGGGATTCTaGCCAGGGGCAGCACTAAAG +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRGTMGF*PGAALK
Trigger: CTTTAGTGCTGCCCCTGGGCAGAATCCCATCGTGCC...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGTGATGATGGCAGGCTaGTGGGTCAGGAACTGGTTT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADVMMAG*WVRNWF
Trigger: AAACCAGTTCCTGACCCAGCAGCCTGCCATCATCAC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTGGACACGGGGTCCACTaGCAAGTAGTACTTGTGTGC +
Preference number: 4 (lower is better)
Translates to: TSTETDTHELRNLNRLHPGHGVH*QVVLVC
Trigger: GCACACAAGTACTACTTGGCAGTGGACCCCGTGTCC...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGGACACGGGGTCCACTaGCAAGTAGTACTTGTGTGC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAGHGVH*QVVLVC
Trigger: GCACACAAGTACTACTTGGCAGTGGACCCCGTGTCC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACCTGGGCTACATCCATaGTGGAATCACAGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAPGLHP*WNHSSA
Trigger: CGCTGAGCTGTGATTCCAGCATGGATGTAGCCCAGG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGCTGCTCTCCGGGGGATaGAGCCTCATACTGGTTGAA +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVLLSGG*SLILVE
Trigger: TTCAACCAGTATGAGGCTGCATCCCCCGGAGAGCAG...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTAAAACATATAACTCCTaGTCTCCGGGGGATGCAGCC +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFKTYNS*SPGDAA
Trigger: GGCTGCATCCCCCGGAGAGCAGGAGTTATATGTTTT...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGACATGCGGGACACGATaGGGCCTTGCTTGTCGATGT +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVTCGTR*GLACRC
Trigger: ACATCGACAAGCAAGGCCGCATCGTGTCCCGCATGT...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAACATGCGGGACACGATaGGGCCTTGCTTGTCGATGT +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMATCGTR*GLACRC
Trigger: ACATCGACAAGCAAGGCCGCATCGTGTCCCGCATGT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ACTACGGAATCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGTCCCGTCAGCGAACATaGGGGACACGATGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: TTESKQTTPCNCVLLSTMSRQRT*GTRCGL
Trigger: AAGGCCGCATCGTGTCCCGCATGTTCGCTGACGGGA...CATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGATTCCGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp CGAAAATGTCAGAAGTATTTGTCCTACAAGCAGTCTGAGTGGTTTGTCCCGCAGACACCTGGCGTCCGGTaGCCAAAAAGGAGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: RKCQKYLSYKQSEWFVPQTPGVR*PKRRSS
Trigger: TGAAGACCTCCTTTTTGGGCACCGGACGCCAGGTGT...CTGCGGGACAAACCACTCAGACTGCTTGTAGGACAAATACTTCTGACATTTTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGACGGGCTTGATGCTTaGGATGCGGAAGCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMADGLDA*DAEAVV
Trigger: GACAACAGCTTCCGCATCGCAAGCATCAAGCCCGTC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCAGTAGTGGGTGTCCTTaGCCTCGATGCTGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFSSGCP*PRCCSA
Trigger: TGCACTACAGCATCGAGGGCAAGGACACCCACTACT...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTCCCTGGCTTTCTGCTaGTCCTTGGCCCAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFSLAFC*SLAQAV
Trigger: CACGGCCTGGGCCAAGGAGCAGCAGAAAGCCAGGGA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGCGTAAGCTGGGAGTaGGCCGCTCTTCGTTTTGTG +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRGVSWE*AALRFV
Trigger: CACAAAACGAAGAGCGGCCCACTCCCAGCTTACGCC...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGGCCTCAGAGTCGACTaGCTGTGGTGGTTCGGAGGG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFGLRVD*LWWFGG
Trigger: CCCTCCGAACCACCACAGCCAGTCGACTCTGAGGCC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGTGGTTGTGAGGGGGTaGGAGAGGGGGCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFVVVRG*ERGPQS
Trigger: ACTCTGAGGCCCCCTCTCCCACCCCCTCACAACCAC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACCTCCAAAACACCCCTaGTGGGACTTCTTGTGTTAC +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGPPKHP*WDFLCY
Trigger: GTAACACAAGAAGTCCCACCAGGGGTGTTTTGGAGG...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGCGATGCACTGATTCATaGGCACGTCGCACTCTGCAC +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVRCTDS*ARRTLH
Trigger: GTGCAGAGTGCGACGTGCCCATGAATCAGTGCATCG...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTCAATGCAGGAGCCGTaGCCCCCGCAGGAAGGATCG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFSMQEP*PPQEGS
Trigger: CGATCCTTCCTGCGGGGGCCACGGCTCCTGCATTGA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ACTACGGAATCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGCACAGACTCCGTGGCTaGAGCAGGTGGGATCCAAGC +
Preference number: 4 (lower is better)
Translates to: TTESKQTTPCNCVLLSTMHRLRG*SRWDPS
Trigger: GCTTGGATCCCACCTGCTCCAGCCACGGAGTCTGTG...CATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGATTCCGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCACTGGTCTGGGCACTaGACCCTCGCCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFHWSGH*TLASSQ
Trigger: CTGTGAGCTGGCGAGGGTCCAGTGCCCAGACCAGTG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGGAGGAGATGATGATTaGATCAGGCCGGACAAAGCC +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADGGDDD*IRPDKA
Trigger: GGCTTTGTCCGGCCTGATCCAATCATCATCTCCTCC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCGGAGGAGATGATGATTaGATCAGGCCGGACAAAGCC +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFGGDDD*IRPDKA
Trigger: GGCTTTGTCCGGCCTGATCCAATCATCATCTCCTCC...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAAGGGGCACTGTGGACTaGGTCATGGTGATCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMARGTVD*VMVIFS
Trigger: GCTGAAGATCACCATGACCCAGTCCACAGTGCCCCT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCACTCCAGACGAACCTaGGCTACATCCATGCTGGAA +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADHSRRT*ATSMLE
Trigger: TTCCAGCATGGATGTAGCCCAGGTTCGTCTGGAGTG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATAAATGGCAATGGCACTaGCTGACTCCAGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADKWQWH*LTPGQS
Trigger: ACTCTGCCCTGGAGTCAGCCAGTGCCATTGCCATTT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCCCCAGTGTGAGAAATaGCAATGGCACTGGCTGACT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADPQCEK*QWHWLT
Trigger: AGTCAGCCAGTGCCATTGCCATTTCTCACACTGGGG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGTGAGGGTGATGATCTaGTTGTCAGGCATGAGCAGG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADVRVMI*LSGMSR
Trigger: CCTGCTCATGCCTGACAACCAGATCATCACCCTCAC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTTTCCCGGTGCAGACTaGTTACCACCCCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFFPGAD*LPPPWG
Trigger: GCCCCACGGGGGTGGTAACCAGTCTGCACCGGGAAA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAACATGGGGCTCGCTGTaGAAGCTGATACCCATCCCA +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMATWGSL*KLIPIP
Trigger: TGGGATGGGTATCAGCTTCCACAGCGAGCCCCATGT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGGAGAAGCCCCCACTTTaGAGGTTGACCATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSEKPPL*RLTIFK
Trigger: CTTGAAGATGGTCAACCTCCAAAGTGGGGGCTTCTC...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCGGAACATCTCATACTaGACCTCCTTGATCCGCCCA +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADRNISY*TSLIRP
Trigger: TGGGCGGATCAAGGAGGTCCAGTATGAGATGTTCCG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGACACTCCACCCGCTaGCCTTGTTGTAGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRGHSTR*PCCRLL
Trigger: CAAGAGCCTACAACAAGGCCAGCGGGTGGAGTGTCC...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGGTGGTGGCCCAGGTTaGTCTTGTAGGAAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFGGGPG*SCRKPA
Trigger: GGCGGGCTTCCTACAAGACCAACCTGGGCCACCACC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTCCACGTTTTTCCACATaGTATAGTCTGGGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFPRFST*YSLGRS
Trigger: GGACCTCCCCAGACTATACCATGTGGAAAAACGTGG...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATACTGTCTGCAAGCTCTaGGTATTGCTCCACGGGAAG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADTVCKL*VLLHGK
Trigger: CTTCCCGTGGAGCAATACCCAGAGCTTGCAGACAGT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGTAGCCGCTTCGGTGTaGGGAGGGCTCACAGATGCC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFVAASV*GGLTDA
Trigger: GGCATCTGTGAGCCCTCCCCACACCGAAGCGGCTAC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATCTGATGGCGTGTTCTaGAGACATCCCTCCCTCGGT +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMASDGVF*RHPSLG
Trigger: ACCGAGGGAGGGATGTCTCCAGAACACGCCATCAGA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS-3UTR TCA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTAGAAAACTCACAGACTaGGGTGAGGTACTGCCGGGT +
Preference number: 4 (lower is better)
Translates to: TSTETDTHELRNLNRLHPRKLTD*GEVLPG
Trigger: ACCCGGCAGTACCTCACCTCAGTCTGTGAGTTTTCT...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTCGTCCAGACGTTCCATaGAGTCATACTGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: TSTETDTHELRNLNRLHPRPDVP*SHTGHE
Trigger: CTCATGCCCAGTATGACTTCATGGAACGTCTGGACG...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGCGTCCAGACGTTCCATaGAGTCATACTGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVRPDVP*SHTGHE
Trigger: CTCATGCCCAGTATGACTTCATGGAACGTCTGGACG...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCCGATGCAGACGCCGTaGGTGCCACAGTCTACTGAG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFPMQTP*VPQSTE
Trigger: CTCAGTAGACTGTGGCACTCACGGCGTCTGCATCGG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGGTTCTCTCCAGGAATaGTGTGGGTGCTATCCTTGC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAGSLQE*CGCYPC
Trigger: GCAAGGATAGCACCCACATCATTCCTGGAGAGAACC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGTGCCATCCTGGCGGGTaGTGGTGTAGCCGTATTTTG +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRCHPGG*WCSRIL
Trigger: CAAAATACGGCTACACCATCACCCGCCAGGATGGCA...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGGTGATCTTCAGCAGTaGCTTGTACCCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADGDLQQ*LVPCSS
Trigger: AGAACTGCAGGGTACAAGTCACTGCTGAAGATCACC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGAGACACAACAGCATCTaGGAGTCCATACACCCTTTG +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSRHNSI*ESIHPL
Trigger: CAAAGGGTGTATGGACTCTCAGATGCTGTTGTGTCT...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATTCCACTCAGAGACTTaGCGCGGTAGATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAFHSET*RGRFSC
Trigger: GCAGGAGAATCTACCGCGTCAAGTCTCTGAGTGGAA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTGAATGGCTAGTTTGCTaGGTGAGTAGTCAATGCCAG +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFEWLVC*VSSQCQ
Trigger: CTGGCATTGACTACTCACTCAGCAAACTAGCCATTC...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGGACTCCAGGGCAGAGTaGATGGCTAGTTTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVDSRAE*MASLLS
Trigger: ACTCAGCAAACTAGCCATTCACTCTGCCCTGGAGTC...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTCTGGTTGTCAGGCATaGGCAGGTGACGGGGCATGC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFSGCQA*AGDGAC
Trigger: GCATGCCCCGTCACCTGCTCATGCCTGACAACCAGA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGTAGGAGGCCTCTACTaGAGAGAGGTTGGTGATGAC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAVGGLY*REVGDD
Trigger: GTCATCACCAACCTCTCTTCAGTAGAGGCCTCCTAC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCCCATTGAAGAAGTATaGCACGTTGACAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADPIEEV*HVDSCQ
Trigger: CTGGCAGCTGTCAACGTGTCATACTTCTTCAATGGG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACCCCACTTTGGAGGTTaGCCATCTTCAAGACACCAG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAPHFGG*PSSRHQ
Trigger: CTGGTGTCTTGAAGATGGTCAACCTCCAAAGTGGGG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGAGTCAAACCTGGCATTaGCCATGCCTTCCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVSQTWH*PCLPRR
Trigger: TCTCCGAGGAAGGCATGGTCAATGCCAGGTTTGACT...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGTGTCGAAGTGTTTGCTaGGGGTCATCACGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRCRSVC*GSSRQW
Trigger: CCACTGCCGTGATGACCCTCAGCAAACACTTCGACA...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGAGGTCGTAGTACAGTaGGGTAATCTCCGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADEVVVQ*GNLRVG
Trigger: TCCAACTCGGAGATTACCTCACTGTACTACGACCTC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTACTTGCTTGACTCTCTaGCAATTCATAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFTCLTL*QFIGRR
Trigger: CCTCCTCCCTATGAATTGTCAGAGAGTCAAGCAAGT...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGTCCTTCCAGAGCCATaGAGGCCTGGTTATGTCTCT +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAVLPEP*RPGYVS
Trigger: AGAGACATAACCAGGCCTTCATGGCTCTGGAAGGAC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACAGGTCGCCATCGGCTaGGCCAATCTTCACAAAGTA +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAQVAIG*ANLHKV
Trigger: TACTTTGTGAAGATTGGCTCAGCCGATGGCGACCTG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAGAGTATGAAATTTGGTTCGGAGGGCCACTaGTGGAGGCTTGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: TAYYCPQWNLQRQKSMKFGSEGH*WRLAGA
Trigger: GGCCCCAGCAAGCCTCCAGCAGTGGCCCTCCGAACC...AAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGTCTCCAGTGGCACGTTaGTGTTTAGCACCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVSPVAR*CLAPSC
Trigger: ACAGCTGGGTGCTAAACAGCAACGTGCCACTGGAGA...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATAAAGGTGTGCCCATCTaGAGGCTGGAGTTGCCAATT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADKGVPI*RLELPI
Trigger: AATTGGCAACTCCAGCCTGCAGATGGGCACACCTTT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCCATTGTTAAAGGTGTaGCCATCTGCAGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADPLLKV*PSAGWS
Trigger: ACTCCAGCCTGCAGATGGGCACACCTTTAACAATGG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR GCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGATCCAGATGGCATTGTTaGCACATCATCGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGSRWHC*HIIVSW
Trigger: CCAGGAAACGATGATGTGGCAACAATGCCATCTGGA...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACACCACTGTCTATGCTaGTGTTTTTCAACGACCAGG +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGHHCLC*CFSTTR
Trigger: CCTGGTCGTTGAAAAACAGCAGCATAGACAGTGGTG...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGCTTCACCACTGTCTATaGTGCTGTTTTTCAACGACC +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWLHHCL*CCFSTT
Trigger: GGTCGTTGAAAAACAGCAGCATAGACAGTGGTGAAG...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCCCCACATCCAGGTACTaGACAAACACGGCTTCATTC +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFPTSRY*TNTASF
Trigger: GAATGAAGCCGTGTTTGTGCAGTACCTGGATGTGGG...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTAGTTGGGATCGCAGCTaGAGAGGCCCGTGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFSWDRS*RGPCQA
Trigger: TGCCTGACACGGGCCTCTGCAGCTGCGATCCCAACT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGTGCAGACGCCGTGAGTaGCACAGTCTACTGAGCACA +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRCRRRE*HSLLST
Trigger: TGTGCTCAGTAGACTGTGGCACTCACGGCGTCTGCA...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACATCGGTGCCTGCCGTTTaGCTACCAATGGTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTSVPAV*LPMVQC
Trigger: ACACTGCACCATTGGTAGGCAAACGGCAGGCACCGA...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATGTTCTGACCCAGTGTaGATCTCCCGTTACCGTTGC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMACSDPV*ISRYRC
Trigger: GCAACGGTAACGGGAGATGCACACTGGGTCAGAACA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGGTGCTATCCTTGCCTaGCAAGAGCTTGATACGGTC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAGAILA*QELDTV
Trigger: GACCGTATCAAGCTCTTGGCAGGCAAGGATAGCACC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCCAGGAACTTGGCAGTaGATGGGGCGTCCCGCAATG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFPGTWQ*MGRPAM
Trigger: CATTGCGGGACGCCCCATGCACTGCCAAGTTCCTGG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAGACACGATGCGGCCTTaGTTGTCGATGTCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTDTMRP*LSMSVL
Trigger: GAGGACAGACATCGACAAGCAAGGCCGCATCGTGTC...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAAGGAGGTCTTCAGGATaGGGCCGTCATCACTGTAGT +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMARRSSG*GRHHCS
Trigger: ACTACAGTGATGACGGCCGCATCCTGAAGACCTCCT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CGAAAATGTCAGAAGTATTTGTCCTACAAGCAGTCTGAGTGGTTTGTCCCGCAGAGTAGTGGGTGTCCTTaGCCTCGATGCTGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: RKCQKYLSYKQSEWFVPQSSGCP*PRCCSA
Trigger: TGCACTACAGCATCGAGGGCAAGGACACCCACTACT...CTGCGGGACAAACCACTCAGACTGCTTGTAGGACAAATACTTCTGACATTTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTGCAAAAGTGTCACGATaGTGCACCTCTACCGAAACT +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFAKVSR*CTSTET
Trigger: AGTTTCGGTAGAGGTGCAGCATCGTGACACTTTTGC...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCATCTGGCAGCTAACTaGTGGAGGATTATGGGAGCT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADHLAAN*WRIMGA
Trigger: AGCTCCCATAATCCTCCACCAGTTAGCTGCCAGATG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTAGAGTCGACTGGCTGTaGTGGTTCGGAGGGCCACTG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFRVDWL*WFGGPL
Trigger: CAGTGGCCCTCCGAACCACCACAGCCAGTCGACTCT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR CCA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTAAGCTGAACGGACTCTaGTGTGGTGGCCAGGTCATT +
Preference number: 4 (lower is better)
Translates to: TSTETDTHELRNLNRLHPKLNGL*CGGQVI
Trigger: AATGACCTGGCCACCACACCAGAGTCCGTTCAGCTT...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAAAGCTGAACGGACTCTaGTGTGGTGGCCAGGTCATT +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAKLNGL*CGGQVI
Trigger: AATGACCTGGCCACCACACCAGAGTCCGTTCAGCTT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGCCAAAACACCCCTGGTaGGACTTCTTGTGTTACCCG +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVPKHPW*DFLCYP
Trigger: CGGGTAACACAAGAAGTCCCACCAGGGGTGTTTTGG...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACGTGGCTGGAGCAGGTaGGATCCAAGCAATCAACTT +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMARGWSR*DPSNQL
Trigger: AAGTTGATTGCTTGGATCCCACCTGCTCCAGCCACG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CGAAAATGTCAGAAGTATTTGTCCTACAAGCAGTCTGAGTGGTTTGTCCCGCAGCGTGGCTGGAGCAGGTaGGATCCAAGCAATCAACTT +
Preference number: 4 (lower is better)
Translates to: RKCQKYLSYKQSEWFVPQRGWSR*DPSNQL
Trigger: AAGTTGATTGCTTGGATCCCACCTGCTCCAGCCACG...CTGCGGGACAAACCACTCAGACTGCTTGTAGGACAAATACTTCTGACATTTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGCACAGGAAGTTTCCATaGCAACGTTGCATCCGGGCC +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRHRKFP*QRCIRA
Trigger: GGCCCGGATGCAACGTTGCCATGGAAACTTCCTGTG...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATCTCCAGGAATGATGTaGGTGCTATCCTTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMASPGMM*VLSLPA
Trigger: GGCAGGCAAGGATAGCACCCACATCATTCCTGGAGA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATCACCAGGGTGTCCATaGCGTAAAAGCTGTTCCACG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMASPGCP*RKSCST
Trigger: CGTGGAACAGCTTTTACGCCATGGACACCCTGGTGA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGTCACAGCTGGGGATaGAGTTCTCCTCGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRGHSWG*SSPRSS
Trigger: TGAAGACCGAGGAGAACTCCATCCCCAGCTGTGACC...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CGAAAATGTCAGAAGTATTTGTCCTACAAGCAGTCTGAGTGGTTTGTCCCGCAGGCCTGGAATGACTTCTaGAAGAGATGCCCCTCGACA +
Preference number: 4 (lower is better)
Translates to: RKCQKYLSYKQSEWFVPQAWNDF*KRCPST
Trigger: TGTCGAGGGGCATCTCTTCCAGAAGTCATTCCAGGC...CTGCGGGACAAACCACTCAGACTGCTTGTAGGACAAATACTTCTGACATTTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAAGGTGTAGGCCAGGTTaGGAGAAGCCTGGAATGACT +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMARCRPG*EKPGMT
Trigger: AGTCATTCCAGGCTTCTCCCAACCTGGCCTACACCT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATGCTGGGTCAGGAACTaGTTTTCCCCAGTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMACWVRN*FSPVPL
Trigger: CAAAGGCACTGGGGAAAACCAGTTCCTGACCCAGCA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAATGATGGCAGGCTGCTaGGTCAGGAACTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAMMAGC*VRNWFS
Trigger: GGAAAACCAGTTCCTGACCCAGCAGCCTGCCATCAT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGATGATGGCAGGCTGCTaGGTCAGGAACTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVMMAGC*VRNWFS
Trigger: GGAAAACCAGTTCCTGACCCAGCAGCCTGCCATCAT...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGTAGTACTTGTGTGCTaGGTTGTTGCTATGTTTAAA +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSVVLVC*VVAMFK
Trigger: TTTAAACATAGCAACAACCCAGCACACAAGTACTAC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAAGATTCTCCTGCTGTTaGTGTCGGACACGTAGAGCG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMARFSCC*CRTRRA
Trigger: CGCTCTACGTGTCCGACACCAACAGCAGGAGAATCT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAGCAATGATGCTGACTTaGTGGTTCTCGGTGATTCGA +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGAMMLT*WFSVIR
Trigger: TCGAATCACCGAGAACCACCAAGTCAGCATCATTGC...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACCCCAGTGTGAGAAATaGCAATGGCACTGGCTGACT +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAPQCEK*QWHWLT
Trigger: AGTCAGCCAGTGCCATTGCCATTTCTCACACTGGGG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACCGTTGGTTGTTACCTaGCGTAGACGGTTAATCTTC +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGPLVVT*RRRLIF
Trigger: GAAGATTAACCGTCTACGCCAGGTAACAACCAACGG...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGCAGATCTCCCCGTTaGTTGTTACCTGGCGTAGAC +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRGRSPR*LLPGVD
Trigger: GTCTACGCCAGGTAACAACCAACGGGGAGATCTGCC...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATAGGCTCACAGTGTATTaGTGGATGCCATCAGCGTTG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADRLTVY*WMPSAL
Trigger: CAACGCTGATGGCATCCACCAATACACTGTGAGCCT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATACGGATGTAGCCGATaGAGGTGTGTGTGGACATGC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAYGCSR*RCVWTC
Trigger: GCATGTCCACACACACCTCCATCGGCTACATCCGTA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATCCTTGATCCGCCCATaGGTGTCGAAGTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMASLIRP*VSKCLL
Trigger: CAGCAAACACTTCGACACCCATGGGCGGATCAAGGA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGTCCTTGATCCGCCCATaGGTGTCGAAGTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVSLIRP*VSKCLL
Trigger: CAGCAAACACTTCGACACCCATGGGCGGATCAAGGA...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAGCACGAAATACATTTTaGCTCTCGGGAAGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGARNTF*LSGSQE
Trigger: TTCCTGGCTTCCCGAGAGCCAAAATGTATTTCGTGC...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGCTCTCTGTTGTCTGTTaGACACCTGTAATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWLSVVC*TPVMSC
Trigger: ACAGCTCATTACAGGTGTCCAACAGACAACAGAGAG...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCCTCTCTCCCGTCCCTaGCTTTCTGCTGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFPLSRP*LSAAPW
Trigger: CCAAGGAGCAGCAGAAAGCCAGGGACGGGAGAGAGG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAACTGTCTGCAAGCTCTaGGTATTGCTCCACGGGAAG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMATVCKL*VLLHGK
Trigger: CTTCCCGTGGAGCAATACCCAGAGCTTGCAGACAGT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATAGCTTTCTTGCCACTTaGTCTCCTAAAGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADSFLAT*SPKAAQ
Trigger: CTGGGCTGCTTTAGGAGACCAAGTGGCAAGAAAGCT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGGGTCTCCATAAGAGATaGTCTGGCTTGCATTCAATT +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWGLHKR*SGLHSI
Trigger: AATTGAATGCAAGCCAGATCATCTCTTATGGAGACC...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTTGGTGTCCATGATTTaGTGGGAGGTGTTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADLVSMI*WEVLLS
Trigger: AGACAGCAACACCTCCCATCAAATCATGGACACCAA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATGCTCTGAGCAGGTATaGATTGGGGGAGAATTCCTC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMACSEQV*IGGEFL
Trigger: GAGGAATTCTCCCCCAATTCATACCTGCTCAGAGCA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR TCA 90 bp ACTACGGAATCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGCCGCCGATTGGTCAGTaGGTTCCTGTTGAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: TTESKQTTPCNCVLLSTMPPIGQ*VPVEGV
Trigger: AACTCCCTCAACAGGAACTCACTGACCAATCGGCGG...CATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGATTCCGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp CGAAAATGTCAGAAGTATTTGTCCTACAAGCAGTCTGAGTGGTTTGTCCCGCAGAGGGCTTCTTCAGCTTaGAAGCCTTCCTGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: RKCQKYLSYKQSEWFVPQRASSA*KPSWRK
Trigger: CTTTCTCCAGGAAGGCTTTCAAGCTGAAGAAGCCCT...CTGCGGGACAAACCACTCAGACTGCTTGTAGGACAAATACTTCTGACATTTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGAGGGCTTCTTCAGCTTaGAAGCCTTCCTGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVRASSA*KPSWRK
Trigger: CTTTCTCCAGGAAGGCTTTCAAGCTGAAGAAGCCCT...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAAGAACTGGGGCTGACTaGTGTGAATTTGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMARTGAD*CEFVTS
Trigger: GGAGGTCACAAATTCACATCAGTCAGCCCCAGTTCT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATGCCTGCCAAGAGCTTaGTACGGTCATAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMACLPRA*YGHRRT
Trigger: AGTCCTTCTATGACCGTATCAAGCTCTTGGCAGGCA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTTGCCTGCCAAGAGCTTaGTACGGTCATAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: TSTETDTHELRNLNRLHPCLPRA*YGHRRT
Trigger: AGTCCTTCTATGACCGTATCAAGCTCTTGGCAGGCA...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACACTACTTGGCCTCGGATaGGAGAAACCAAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTLLGLG*EKPSCC
Trigger: ACAGCAGCTTGGTTTCTCTCATCCGAGGCCAAGTAG...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAAGCTCGATTTCTTCATaGAGAACCTGGGTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMASSISS*RTWVSG
Trigger: GCCTGAGACCCAGGTTCTTCATGAAGAAATCGAGCT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATAGACACAACAGCATCTaGGAGTCCATACACCCTTTG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADRHNSI*ESIHPL
Trigger: CAAAGGGTGTATGGACTCTCAGATGCTGTTGTGTCT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCAGACACAACAGCATCTaGGAGTCCATACACCCTTTG +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFRHNSI*ESIHPL
Trigger: CAAAGGGTGTATGGACTCTCAGATGCTGTTGTGTCT...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGACTCCAGGGCAGAGTaGATGGCTAGTTTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRDSRAE*MASLLS
Trigger: ACTCAGCAAACTAGCCATTCACTCTGCCCTGGAGTC...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTGGATGCCATCAGCGTTaGAAACATATAACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFGCHQR*KHITPA
Trigger: AGCAGGAGTTATATGTTTTCAACGCTGATGGCATCC...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATGCCATCATAGGTCATaGGACCAAGCTCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMACHHRS*DQAPGS
Trigger: AGAACCTGGAGCTTGGTCTCATGACCTATGATGGCA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGTGCCATCATAGGTCATaGGACCAAGCTCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVCHHRS*DQAPGS
Trigger: AGAACCTGGAGCTTGGTCTCATGACCTATGATGGCA...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACACTGTAGTCAAAGATaGCCGAAGCATTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGHCSQR*PKHCFQ
Trigger: CTGAAAGCAATGCTTCGGTCATCTTTGACTACAGTG...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGCCCCACTTTGGAGGTTaGCCATCTTCAAGACACCAG +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRPHFGG*PSSRHQ
Trigger: CTGGTGTCTTGAAGATGGTCAACCTCCAAAGTGGGG...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCAATCTTCCGGTACCTaGTGGTGCAGGAGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFQSSGT*WCRRSP
Trigger: GGGGCTTCTCCTGCACCATCAGGTACCGGAAGATTG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGAGGTCGTAGTACAGTaGGGTAATCTCCGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAEVVVQ*GNLRVG
Trigger: TCCAACTCGGAGATTACCTCACTGTACTACGACCTC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTCATAATCACGCTGAGTaGAGTGGACCAGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: TSTETDTHELRNLNRLHPHNHAE*SGPAWS
Trigger: TGACCAAGCTGGTCCACTTCACTCAGCGTGATTATG...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATACTTGCTTGACTCTCTaGCAATTCATAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADTCLTL*QFIGRR
Trigger: CCTCCTCCCTATGAATTGTCAGAGAGTCAAGCAAGT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCGTGGTGACTGTCATGTaGTTGTCTCAGTTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFVVTVM*LSQFLD
Trigger: GTCCAGAAACTGAGACAATCACATGACAGTCACCAC...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCTCTGCCCCACAGTCTaGTGGCGTGTTCTGGAGACA +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFLCPTV*WRVLET
Trigger: TGTCTCCAGAACACGCCATCAGACTGTGGGGCAGAG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAACTGAGGTGAGGTACTaGCGGGTCTCCATAAGAGAT +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMATEVRY*RVSIRD
Trigger: ATCTCTTATGGAGACCCGGCAGTACCTCACCTCAGT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAAAAGGTGTGCCCATCTaGAGGCTGGAGTTGCCAATT +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAKGVPI*RLELPI
Trigger: AATTGGCAACTCCAGCCTGCAGATGGGCACACCTTT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR GCA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTCCATTGTTAAAGGTGTaGCCATCTGCAGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: TSTETDTHELRNLNRLHPPLLKV*PSAGWS
Trigger: ACTCCAGCCTGCAGATGGGCACACCTTTAACAATGG...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCACCACTGTCTATGCTaGTGTTTTTCAACGACCAGG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADHHCLC*CFSTTR
Trigger: CCTGGTCGTTGAAAAACAGCAGCATAGACAGTGGTG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACTTCACCACTGTCTATaGTGCTGTTTTTCAACGACC +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGLHHCL*CCFSTT
Trigger: GGTCGTTGAAAAACAGCAGCATAGACAGTGGTGAAG...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGCCGCCGACCAACTTCTaGTTCACCACTGTCTATGCT +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRPPTNF*FTTVYA
Trigger: AGCATAGACAGTGGTGAAGCAGAAGTTGGTCGGCGG...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCTCGGCATTCACATTTaGCATCTTTACAGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADLGIHI*HLYRSR
Trigger: ACGGGACCTGTAAAGATGGCAAATGTGAATGCCGAG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTTTGCCTACCAATGGTaGAGTGTTCACCATTCCAGC +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADFAYQW*SVHHSS
Trigger: GCTGGAATGGTGAACACTGCACCATTGGTAGGCAAA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGGCACGATGGGATTCTaGCCAGGGGCAGCACTAAAG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFGTMGF*PGAALK
Trigger: CTTTAGTGCTGCCCCTGGGCAGAATCCCATCGTGCC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGTGATGATGGCAGGCTaGTGGGTCAGGAACTGGTTT +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRVMMAG*WVRNWF
Trigger: AAACCAGTTCCTGACCCAGCAGCCTGCCATCATCAC...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAAATATTTCCAAGGTCTaGAATGTAAATGGTACCATC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSNISKV*NVNGTI
Trigger: GATGGTACCATTTACATTGCAGACCTTGGAAATATT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGTCGTCAATTTTGTACTaGACATCCCCGAGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSSSILY*TSPSLV
Trigger: AACCAGACTCGGGGATGTGCAGTACAAAATTGACGA...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CGAAAATGTCAGAAGTATTTGTCCTACAAGCAGTCTGAGTGGTTTGTCCCGCAGGTTGTTCAGCACAGATaGCACCTTGCGGCTATCTTC +
Preference number: 4 (lower is better)
Translates to: RKCQKYLSYKQSEWFVPQVVQHR*HLAAIF
Trigger: GAAGATAGCCGCAAGGTGGCATCTGTGCTGAACAAC...CTGCGGGACAAACCACTCAGACTGCTTGTAGGACAAATACTTCTGACATTTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGGTTGTTCAGCACAGATaGCACCTTGCGGCTATCTTC +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVVVQHR*HLAAIF
Trigger: GAAGATAGCCGCAAGGTGGCATCTGTGCTGAACAAC...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTAAAACTGGATGTTGCTaGTACTGTCTGCAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFKTGCC*YCLQAL
Trigger: CAGAGCTTGCAGACAGTAGCAGCAACATCCAGTTTT...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGTGTGTGCTGGGTTGTTaGGTAACTCCAAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVCVLGC*VTPRCW
Trigger: CCAGCATCTTGGAGTTACGCAACAACCCAGCACACA...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACCTCCAAAACACCCCTaGTGGGACTTCTTGTGTTAC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAPPKHP*WDFLCY
Trigger: GTAACACAAGAAGTCCCACCAGGGGTGTTTTGGAGG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCATGATGCTGACTTGGTaGTTCTCGGTGATTCGAAGG +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFMMLTW*FSVIRR
Trigger: CCTTCGAATCACCGAGAACCACCAAGTCAGCATCAT...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGTGTGAGAAATGGCAATaGCACTGGCTGACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRCEKWQ*HWLTPG
Trigger: CCCTGGAGTCAGCCAGTGCCATTGCCATTTCTCACA...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATATGGGGAATTCAAGATaGCATCAGTCGCGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADMGNSR*HQSRRH
Trigger: ATGCCTACGCGACTGATGCCATCTTGAATTCCCCAT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTGGTCTGCAATGTAAATaGTACCATCTGGAGCTACAG +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFGLQCK*YHLELQ
Trigger: CTGTAGCTCCAGATGGTACCATTTACATTGCAGACC...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGGATGCAGCCTCATACTaGTTGAAGGCATTAAGAACA +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWDAASY*LKALRT
Trigger: TGTTCTTAATGCCTTCAACCAGTATGAGGCTGCATC...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAAGGCTCACAGTGTATTaGTGGATGCCATCAGCGTTG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMARLTVY*WMPSAL
Trigger: CAACGCTGATGGCATCCACCAATACACTGTGAGCCT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ACTACGGAATCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGACATGGGGCTCGCTGTaGAAGCTGATACCCATCCCA +
Preference number: 4 (lower is better)
Translates to: TTESKQTTPCNCVLLSTMTWGSL*KLIPIP
Trigger: TGGGATGGGTATCAGCTTCCACAGCGAGCCCCATGT...CATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGATTCCGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTTTAGGCGCCACTCAATaGAGTTTAAGCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFLGATQ*SLSHSP
Trigger: TGGAGAATGGCTTAAACTCCATTGAGTGGCGCCTAA...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATCTTCAAGACACCAGTaGTCTCGTCATACCCGAAGG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMASSRHQ*SRHTRR
Trigger: CCTTCGGGTATGACGAGACCACTGGTGTCTTGAAGA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGAGAAGCCCCCACTTTaGAGGTTGACCATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAEKPPL*RLTIFK
Trigger: CTTGAAGATGGTCAACCTCCAAAGTGGGGGCTTCTC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTTGTACTTCGTGGTATTaGCATAGGGCCCCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFCTSWY*HRAPVL
Trigger: TAAAACTGGGGCCCTATGCCAATACCACGAAGTACA...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAGAGTATGAAATTTTTGACGGCCACGCTCTaGAGCTGCCCGTCCCCATCG +
Preference number: 4 (lower is better)
Translates to: TAYYCPQWNLQRQKSMKFLTATL*SCPSPS
Trigger: CGATGGGGACGGGCAGCTCCAGAGCGTGGCCGTCAA...AAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGGACACTCCACCCGCTaGCCTTGTTGTAGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFGHSTR*PCCRLL
Trigger: CAAGAGCCTACAACAAGGCCAGCGGGTGGAGTGTCC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTTCTGGAAGTCGGGGTTaGAGTCATAATAAATCTCCC +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFSGSRG*SHNKSP
Trigger: GGGAGATTTATTATGACTCCAACCCCGACTTCCAGA...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAAAGCCAATGACCATCTaGAAGTCGGGGTTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAKPMTI*KSGLES
Trigger: TGACTCCAACCCCGACTTCCAGATGGTCATTGGCTT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGCACGAAATACATTTTaGCTCTCGGGAAGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADARNTF*LSGSQE
Trigger: TTCCTGGCTTCCCGAGAGCCAAAATGTATTTCGTGC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTCTCTGTTGTCTGTTaGACACCTGTAATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSLSVVC*TPVMSC
Trigger: ACAGCTCATTACAGGTGTCCAACAGACAACAGAGAG...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCTCGGATGCTGGCGTaGAGCTTTTTAGTAATGACC +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFSRMLA*SFLVMT
Trigger: GGTCATTACTAAAAAGCTCCACGCCAGCATCCGAGA...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTCAGTGAGTTCCTGTTaGGGGAGTTGGCGGACGAGT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFSVSSC*GSWRTS
Trigger: ACTCGTCCGCCAACTCCCTCAACAGGAACTCACTGA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCCGCCGATTGGTCAGTaGGTTCCTGTTGAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFPPIGQ*VPVEGV
Trigger: AACTCCCTCAACAGGAACTCACTGACCAATCGGCGG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAACTGATGTGAATTTGTaGCCTCCAAAACACCCCTGG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMATDVNL*PPKHPW
Trigger: CCAGGGGTGTTTTGGAGGTCACAAATTCACATCAGT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGTCCCGAGGGAGATGTTaGACTTTAAGAACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRSRGRC*TLRTGA
Trigger: AGCCCCAGTTCTTAAAGTTCAACATCTCCCTCGGGA...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGCTAGGACAACAGTATTaGAGGAAACCATCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWLGQQY*RKPSLC
Trigger: ACAAAGAGATGGTTTCCTTCAATACTGTTGTCCTAG...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ACTACGGAATCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGAATCCTGGGAAACAGTaGCACACCCCGGACACACAT +
Preference number: 4 (lower is better)
Translates to: TTESKQTTPCNCVLLSTMNPGKQ*HTPDTH
Trigger: ATGTGTGTCCGGGGTGTGTCACTGTTTCCCAGGATT...CATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGATTCCGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGAAGGATCGATGCACTaGTTCATGGGCACGTCGCAC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFEGSMH*FMGTSH
Trigger: GTGCGACGTGCCCATGAATCAGTGCATCGATCCTTC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGAGTGCCACAGTCTACTaGGCACACTTCAACAGAGCA +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRSATVY*AHFNRA
Trigger: TGCTCTGTTGAAGTGTGCTCAGTAGACTGTGGCACT...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAGAGTATGAAATTTTCTGGCCCTGCTGAATaGTGTCCAGTGGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: TAYYCPQWNLQRQKSMKFSGPAE*CPVGPG
Trigger: CCCGGGACCCACTGGACATCATTCAGCAGGGCCAGA...AAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACGTATTTTGGGTACTTaGCAAAAGACACGTTCACAC +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGRILGT*QKTRSH
Trigger: GTGTGAACGTGTCTTTTGTCAAGTACCCAAAATACG...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTGCCATCCTGGCGGGTaGTGGTGTAGCCGTATTTTG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFCHPGG*WCSRIL
Trigger: CAAAATACGGCTACACCATCACCCGCCAGGATGGCA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTCCAGCTCGAATCCCTaGAGGAGGGCTGTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFSSSNP*RRAVLF
Trigger: GAAAAGGACAGCCCTCCTTCAGGGATTCGAGCTGGA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGAATGGCTAGTTTGCTaGGTGAGTAGTCAATGCCAG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAEWLVC*VSSQCQ
Trigger: CTGGCATTGACTACTCACTCAGCAAACTAGCCATTC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGTAGGCATCATCTCCTaGATAGCAGTTGCAATTGAC +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADVGIIS*IAVAID
Trigger: GTCAATTGCAACTGCTATTCAGGAGATGATGCCTAC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGGATGCCATCAGCGTTaGAAACATATAACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADGCHQR*KHITPA
Trigger: AGCAGGAGTTATATGTTTTCAACGCTGATGGCATCC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CCTTCTTTCTTATCTTCGCTTCTTTGTTTATTGGTCCGTGTGTTTGTTTTGTTTTCAGGCATGAGCAGGTaGCGGGGCATGCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: PSFLSSLLCLLVRVFVLFSGMSR*RGMPLL
Trigger: CAGCAGTGGCATGCCCCGTCACCTGCTCATGCCTGA...AAACAAAACAAACACACGGACCAATAAACAAAGAAGCGAAGATAAGAAAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCACTGTAGTCAAAGATaGCCGAAGCATTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADHCSQR*PKHCFQ
Trigger: CTGAAAGCAATGCTTCGGTCATCTTTGACTACAGTG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ACTACGGAATCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGCCCCACTTTGGAGGTTaGCCATCTTCAAGACACCAG +
Preference number: 4 (lower is better)
Translates to: TTESKQTTPCNCVLLSTMPHFGG*PSSRHQ
Trigger: CTGGTGTCTTGAAGATGGTCAACCTCCAAAGTGGGG...CATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGATTCCGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGAGGTCGTAGTACAGTaGGGTAATCTCCGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFREVVVQ*GNLRVG
Trigger: TCCAACTCGGAGATTACCTCACTGTACTACGACCTC...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGACTTGCTTGACTCTCTaGCAATTCATAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVTCLTL*QFIGRR
Trigger: CCTCCTCCCTATGAATTGTCAGAGAGTCAAGCAAGT...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp AGTGAGGTAATTGGATATGAGGCCTTCTTTCTTATCTTCGCTTCTTTGTTTATTTGGTGGTGCCTAGTGTaGCCAGGTCGCCATCGGCTG +
Preference number: 4 (lower is better)
Translates to: SEVIGYEAFFLIFASLFIWWCLV*PGRHRL
Trigger: CAGCCGATGGCGACCTGGTCACACTAGGCACCACCA...AATAAACAAAGAAGCGAAGATAAGAAAGAAGGCCTCATATCCAATTACCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTTTGATGGGAGGTGTTaGTGTCTAGCAATGGCATCT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADFDGRC*CLAMAS
Trigger: AGATGCCATTGCTAGACAGCAACACCTCCCATCAAA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACACCACTGTCTATGCTaGTGTTTTTCAACGACCAGG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAHHCLC*CFSTTR
Trigger: CCTGGTCGTTGAAAAACAGCAGCATAGACAGTGGTG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCTTCACCACTGTCTATaGTGCTGTTTTTCAACGACC +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADLHHCL*CCFSTT
Trigger: GGTCGTTGAAAAACAGCAGCATAGACAGTGGTGAAG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp AGTGAGGTAATTGGATATGAGGCCTTCTTTCTTATCTTCGCTTCTTTGTTTATTGGCAGGTACGTGCCATaGCCACTGCACTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SEVIGYEAFFLIFASLFIGRYVP*PLHWSG
Trigger: CCCAGACCAGTGCAGTGGGCATGGCACGTACCTGCC...AATAAACAAAGAAGCGAAGATAAGAAAGAAGGCCTCATATCCAATTACCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp CGAAAATGTCAGAAGTATTTGTCCTACAAGCAGTCTGAGTGGTTTGTCCCGCAGTTTGCCTACCAATGGTaGAGTGTTCACCATTCCAGC +
Preference number: 4 (lower is better)
Translates to: RKCQKYLSYKQSEWFVPQFAYQW*SVHHSS
Trigger: GCTGGAATGGTGAACACTGCACCATTGGTAGGCAAA...CTGCGGGACAAACCACTCAGACTGCTTGTAGGACAAATACTTCTGACATTTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTCAAAGGGTAGACACTaGTCTCCCGTCCCTGCCACA +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFSKGRH*SPVPAT
Trigger: TGTGGCAGGGACGGGAGAGCAGTGTCTACCCTTTGA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACCCATTCTTGTCTACTaGAATACCTCTCGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAPILVY*NTSRAH
Trigger: ATGAGCCCGAGAGGTATTGCAGTAGACAAGAATGGG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCCTGGGCTACATCCATaGTGGAATCACAGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFPGLHP*WNHSSA
Trigger: CGCTGAGCTGTGATTCCAGCATGGATGTAGCCCAGG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGAAAACATATAACTCCTaGTCTCCGGGGGATGCAGCC +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRKTYNS*SPGDAA
Trigger: GGCTGCATCCCCCGGAGAGCAGGAGTTATATGTTTT...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTTCTCCATTTCCCGGTaGAGACTGGTTACCACCCCC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFFSISR*RLVTTP
Trigger: GGGGGTGGTAACCAGTCTGCACCGGGAAATGGAGAA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTACATGCGGGACACGATaGGGCCTTGCTTGTCGATGT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFTCGTR*GLACRC
Trigger: ACATCGACAAGCAAGGCCGCATCGTGTCCCGCATGT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp AGTGAGGTAATTGGATATGAGGCCTTCTTTCTTATCTTCGCTTCTTTGTTTATTTGTGTGGACATGCTGTaGCGGGCCACGCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: SEVIGYEAFFLIFASLFICVDML*RATLGM
Trigger: CATGCCCAGCGTGGCCCGGCACAGCATGTCCACACA...AATAAACAAAGAAGCGAAGATAAGAAAGAAGGCCTCATATCCAATTACCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGGCAAACCAGTGACCTaGTTTCTCTCGGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFGKPVT*FLSDAG
Trigger: GCCAGCATCCGAGAGAAAGCAGGTCACTGGTTTGCC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ACTACGGAATCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGAATGATCAGGAGAGGTaGGCTCACCATCGGCGTAAG +
Preference number: 4 (lower is better)
Translates to: TTESKQTTPCNCVLLSTMNDQER*AHHRRK
Trigger: CTTACGCCGATGGTGAGCCCACCTCTCCTGATCATT...CATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGATTCCGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTAGGCGAGGATGTAGGTaGAATGGGACGACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFRRGCR*NGTTQR
Trigger: TCTCTGGGTCGTCCCATTCCACCTACATCCTCGCCT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp ACTACGGAATCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGCTGGCAGCTAACTGGTaGAGGATTATGGGAGCTAGG +
Preference number: 4 (lower is better)
Translates to: TTESKQTTPCNCVLLSTMLAANW*RIMGAR
Trigger: CCTAGCTCCCATAATCCTCCACCAGTTAGCTGCCAG...CATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGATTCCGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACACATCTGGCAGCTAACTaGTGGAGGATTATGGGAGCT +
Preference number: 4 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTHLAAN*WRIMGA
Trigger: AGCTCCCATAATCCTCCACCAGTTAGCTGCCAGATG...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp CCTTCTTTCTTATCTTCGCTTCTTTGTTTATTGGTCCGTGTGTTTGTTTTGTTTTGGAGAAAGTATTCCTaGGCAGCAGGCGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PSFLSSLLCLLVRVFVLFWRKYS*AAGGAG
Trigger: CCCCGCCCCGCCTGCTGCCCAGGAATACTTTCTCCA...AAACAAAACAAACACACGGACCAATAAACAAAGAAGCGAAGATAAGAAAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACACTTTGCCTCCAGATaGCATTGTTGCCACATCATC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAHFASR*HCCHII
Trigger: GATGATGTGGCAACAATGCCATCTGGAGGCAAAGTG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR CCA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACACCTCCAAAACACCCCTaGTGGGACTTCTTGTGTTAC +
Preference number: 4 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTPPKHP*WDFLCY
Trigger: GTAACACAAGAAGTCCCACCAGGGGTGTTTTGGAGG...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCTGGGCATGAGATGGTaGAAGTCCTCTTCTTATGTA +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADLGMRW*KSSSYV
Trigger: TACATAAGAAGAGGACTTCCACCATCTCATGCCCAG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAATACTGGGCATGAGATaGTGGAAGTCCTCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGILGMR*WKSSSY
Trigger: ATAAGAAGAGGACTTCCACCATCTCATGCCCAGTAT...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCGATGCACTGATTCATaGGCACGTCGCACTCTGCAC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFRCTDS*ARRTLH
Trigger: GTGCAGAGTGCGACGTGCCCATGAATCAGTGCATCG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCACAGGAAGTTTCCATaGCAACGTTGCATCCGGGCC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFHRKFP*QRCIRA
Trigger: GGCCCGGATGCAACGTTGCCATGGAAACTTCCTGTG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CCTTCTTTCTTATCTTCGCTTCTTTGTTTATTGGTCCGTGTGTTTGTTTTGTTTCTGAATGATGTCCAGTaGGTCCCGGGACCCCCGGCA +
Preference number: 4 (lower is better)
Translates to: PSFLSSLLCLLVRVFVLFLNDVQ*VPGPPA
Trigger: TGCCGGGGGTCCCGGGACCCACTGGACATCATTCAG...AAACAAAACAAACACACGGACCAATAAACAAAGAAGCGAAGATAAGAAAGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCTGTAGTTACTACTTaGCCTCGGATGAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFSVVTT*PRMRET
Trigger: GGTTTCTCTCATCCGAGGCCAAGTAGTAACTACAGA...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTGGTGTAGCCGTATTTTaGGTACTTGACAAAAGACAC +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFGVAVF*VLDKRH
Trigger: GTGTCTTTTGTCAAGTACCCAAAATACGGCTACACC...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ACTACGGAATCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGTCACCAGGGTGTCCATaGCGTAAAAGCTGTTCCACG +
Preference number: 4 (lower is better)
Translates to: TTESKQTTPCNCVLLSTMSPGCP*RKSCST
Trigger: CGTGGAACAGCTTTTACGCCATGGACACCCTGGTGA...CATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGATTCCGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGGTCACAGCTGGGGATaGAGTTCTCCTCGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFGHSWG*SSPRSS
Trigger: TGAAGACCGAGGAGAACTCCATCCCCAGCTGTGACC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATAGCGAAGTTTCACATTaGAACCAGGGAGCTCGATTT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADSEVSH*NQGARF
Trigger: AAATCGAGCTCCCTGGTTCCAATGTGAAACTTCGCT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTAGGGGCACTGTGGACTaGGTCATGGTGATCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFRGTVD*VMVIFS
Trigger: GCTGAAGATCACCATGACCCAGTCCACAGTGCCCCT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGAGTCCATACACCCTTTaGCCATACGCATCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVSPYTL*PYASVL
Trigger: CAAGACAGATGCGTATGGCCAAAGGGTGTATGGACT...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGATTAACATTGAGGATGTaGTGTTTGTCTAGGGACCAG +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGLTLRM*CLSRDQ
Trigger: CTGGTCCCTAGACAAACACCACATCCTCAATGTTAA...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGTAACTCCAAGATGCTaGTCACATTTCGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADVTPRC*SHFERE
Trigger: TTCCCTCTCGAAATGTGACCAGCATCTTGGAGTTAC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACAACCTTCCGGATCATaGTGGCATCGACAAAGTACA +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAQPSGS*WHRQST
Trigger: TGTACTTTGTCGATGCCACCATGATCCGGAAGGTTG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAATGATGCTGACTTaGTGGTTCTCGGTGATTCGA +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAAMMLT*WFSVIR
Trigger: TCGAATCACCGAGAACCACCAAGTCAGCATCATTGC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGGCAATGATGCTGACTTaGTGGTTCTCGGTGATTCGA +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVAMMLT*WFSVIR
Trigger: TCGAATCACCGAGAACCACCAAGTCAGCATCATTGC...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACCGTTGGTTGTTACCTaGCGTAGACGGTTAATCTTC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAPLVVT*RRRLIF
Trigger: GAAGATTAACCGTCTACGCCAGGTAACAACCAACGG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CGAAAATGTCAGAAGTATTTGTCCTACAAGCAGTCTGAGTGGTTTGTCCCGCAGATGGGGAATTCAAGATaGCATCAGTCGCGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: RKCQKYLSYKQSEWFVPQMGNSR*HQSRRH
Trigger: ATGCCTACGCGACTGATGCCATCTTGAATTCCCCAT...CTGCGGGACAAACCACTCAGACTGCTTGTAGGACAAATACTTCTGACATTTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGGTCTGCAATGTAAATaGTACCATCTGGAGCTACAG +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADGLQCK*YHLELQ
Trigger: CTGTAGCTCCAGATGGTACCATTTACATTGCAGACC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGAGGCTCACAGTGTATTaGTGGATGCCATCAGCGTTG +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRRLTVY*WMPSAL
Trigger: CAACGCTGATGGCATCCACCAATACACTGTGAGCCT...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ACTACGGAATCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGTGAGGGTGATGATCTaGTTGTCAGGCATGAGCAGG +
Preference number: 4 (lower is better)
Translates to: TTESKQTTPCNCVLLSTMVRVMI*LSGMSR
Trigger: CCTGCTCATGCCTGACAACCAGATCATCACCCTCAC...CATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGATTCCGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTACATGGGGCTCGCTGTaGAAGCTGATACCCATCCCA +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFTWGSL*KLIPIP
Trigger: TGGGATGGGTATCAGCTTCCACAGCGAGCCCCATGT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGAAGCAGGAGGACCATaGACTTGTCAAGGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFREAGGP*TCQGRS
Trigger: ACTCCTACCTTGACAAGTCCATGGTCCTCCTGCTTC...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTGTACTTCGTGGTATTaGCATAGGGCCCCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADCTSWY*HRAPVL
Trigger: TAAAACTGGGGCCCTATGCCAATACCACGAAGTACA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGCATAGGTGTACTTCGTaGTATTGGCATAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRHRCTS*YWHRAP
Trigger: TGGGGCCCTATGCCAATACCACGAAGTACACCTATG...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGTTGTTAGGAGGCCCTTaGAATTGTATTCGAAGATGT +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWLLGGP*NCIRRC
Trigger: ACATCTTCGAATACAATTCCAAGGGCCTCCTAACAA...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp AGTGAGGTAATTGGATATGAGGCCTTCTTTCTTATCTTCGCTTCTTTGTTTATTGGTGGTGGCCCAGGTTaGTCTTGTAGGAAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: SEVIGYEAFFLIFASLFIGGGPG*SCRKPA
Trigger: GGCGGGCTTCCTACAAGACCAACCTGGGCCACCACC...AATAAACAAAGAAGCGAAGATAAGAAAGAAGGCCTCATATCCAATTACCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAGCCAATGACCATCTaGAAGTCGGGGTTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTKPMTI*KSGLES
Trigger: TGACTCCAACCCCGACTTCCAGATGGTCATTGGCTT...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTGCACGAAATACATTTTaGCTCTCGGGAAGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: TSTETDTHELRNLNRLHPARNTF*LSGSQE
Trigger: TTCCTGGCTTCCCGAGAGCCAAAATGTATTTCGTGC...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATCTCGGATGCTGGCGTaGAGCTTTTTAGTAATGACC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMASRMLA*SFLVMT
Trigger: GGTCATTACTAAAAAGCTCCACGCCAGCATCCGAGA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CCTTCTTTCTTATCTTCGCTTCTTTGTTTATTGGTCCGTGTGTTTGTTTTGTTTTGCGGCTATCTTCGCTaGCGATGCTGGACACGCCCG +
Preference number: 4 (lower is better)
Translates to: PSFLSSLLCLLVRVFVLFCGYLR*RCWTRP
Trigger: CGGGCGTGTCCAGCATCGCCAGCGAAGATAGCCGCA...AAACAAAACAAACACACGGACCAATAAACAAAGAAGCGAAGATAAGAAAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGCAGGCCAGACTTAGTTaGGACCTGAGAGTTAAGTGC +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRQARLS*DLRVKC
Trigger: GCACTTAACTCTCAGGTCCCAACTAAGTCTGGCCTG...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTCATCTGACTCCCGGTaGATGAGGTCTGTGACTCGG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFSSDSR*MRSVTR
Trigger: CCGAGTCACAGACCTCATCCACCGGGAGTCAGATGA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGCTGGAGTTGCCAATTaGGTCCGAGCAGATGCATTG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFAGVAN*VRADAL
Trigger: CAATGCATCTGCTCGGACTCAATTGGCAACTCCAGC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR TCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGACTGATGTGAATTTGTaGCCTCCAAAACACCCCTGG +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRTDVNL*PPKHPW
Trigger: CCAGGGGTGTTTTGGAGGTCACAAATTCACATCAGT...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ACTACGGAATCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGAGTGCCACAGTCTACTaGGCACACTTCAACAGAGCA +
Preference number: 4 (lower is better)
Translates to: TTESKQTTPCNCVLLSTMSATVY*AHFNRA
Trigger: TGCTCTGTTGAAGTGTGCTCAGTAGACTGTGGCACT...CATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGATTCCGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp ACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAGAGTATGAAATTTTGCGCTCCTGGCTCATaGACGGGGCTCGCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: TAYYCPQWNLQRQKSMKFCAPGS*TGLAQS
Trigger: ACTTTGAGCGAGCCCCGTTCATGAGCCAGGAGCGCA...AAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGACTCCAGGGCAGAGTaGATGGCTAGTTTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFDSRAE*MASLLS
Trigger: ACTCAGCAAACTAGCCATTCACTCTGCCCTGGAGTC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCAGGTCGCCATCGGCTaGGCCAATCTTCACAAAGTA +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFQVAIG*ANLHKV
Trigger: TACTTTGTGAAGATTGGCTCAGCCGATGGCGACCTG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGGAACTCAATGTTCGTaGACCTTCGAGTCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFGTQCS*TFESCR
Trigger: ACGGCAGGACTCGAAGGTTCACGAACATTGAGTTCC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp AGTGAGGTAATTGGATATGAGGCCTTCTTTCTTATCTTCGCTTCTTTGTTTATTGGCCATAGCGGATGCTaGGCAGCAGCGTGGAGTACT +
Preference number: 4 (lower is better)
Translates to: SEVIGYEAFFLIFASLFIGHSGC*AAAWST
Trigger: AGTACTCCACGCTGCTGCTCAGCATCCGCTATGGCC...AATAAACAAAGAAGCGAAGATAAGAAAGAAGGCCTCATATCCAATTACCTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp CGAAAATGTCAGAAGTATTTGTCCTACAAGCAGTCTGAGTGGTTTGTCCCGCAGCATGTATGTACAGGGTaGTCAGAAGTGGTACCTGTT +
Preference number: 4 (lower is better)
Translates to: RKCQKYLSYKQSEWFVPQHVCTG*SEVVPV
Trigger: AACAGGTACCACTTCTGATCACCCTGTACATACATG...CTGCGGGACAAACCACTCAGACTGCTTGTAGGACAAATACTTCTGACATTTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACATTTCTCTCCTCGTGGTaGCTGTCATGTGATTGTCTC +
Preference number: 4 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTFLSSW*LSCDCL
Trigger: GAGACAATCACATGACAGTCACCACGAGGAGAGAAA...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTACGACCAGGGCACTTTaGCTCCAGATGGCATTGTTG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFTTRAL*LQMALL
Trigger: CAACAATGCCATCTGGAGGCAAAGTGCCCTGGTCGT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCCGCCGACCAACTTCTaGTTCACCACTGTCTATGCT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFPPTNF*FTTVYA
Trigger: AGCATAGACAGTGGTGAAGCAGAAGTTGGTCGGCGG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATTACGTGGACAGTCCTaGACTGAATCTAGGACAACA +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMALRGQS*TESRTT
Trigger: TGTTGTCCTAGATTCAGTGCAGGACTGTCCACGTAA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CGAAAATGTCAGAAGTATTTGTCCTACAAGCAGTCTGAGTGGTTTGTCCCGCAGTTACGTGGACAGTCCTaGACTGAATCTAGGACAACA +
Preference number: 4 (lower is better)
Translates to: RKCQKYLSYKQSEWFVPQLRGQS*TESRTT
Trigger: TGTTGTCCTAGATTCAGTGCAGGACTGTCCACGTAA...CTGCGGGACAAACCACTCAGACTGCTTGTAGGACAAATACTTCTGACATTTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTAGCCATCTGTTTCGGTaGCTGCCGTTTGCCTACCAA +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFSHLFR*LPFAYQ
Trigger: TTGGTAGGCAAACGGCAGGCACCGAAACAGATGGCT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTATCTCCCGTTACCGTTaGACAAGTCAGGGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFISRYR*TSQGSH
Trigger: ATGGCTGCCCTGACTTGTGCAACGGTAACGGGAGAT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGGTGCTATCCTTGCCTaGCAAGAGCTTGATACGGTC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFGAILA*QELDTV
Trigger: GACCGTATCAAGCTCTTGGCAGGCAAGGATAGCACC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGACTGGTTTTCCCCAGTaGCTTTGTGTAGGATTCCAC +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRTGFPQ*LCVGFH
Trigger: GTGGAATCCTACACAAAGGCACTGGGGAAAACCAGT...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATTCGTAACTCCAAGATaGTGGTCACATTTCGAGAGG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAFVTPR*WSHFER
Trigger: CCTCTCGAAATGTGACCAGCATCTTGGAGTTACGAA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR GCA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAAGTAGTACTTGTGTaGTGGGTTGTTGCTATGTTT +
Preference number: 4 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGQVVLV*WVVAMF
Trigger: AAACATAGCAACAACCCAGCACACAAGTACTACTTG...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTAGGAGGTCTTCAGGATaGGGCCGTCATCACTGTAGT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFRRSSG*GRHHCS
Trigger: ACTACAGTGATGACGGCCGCATCCTGAAGACCTCCT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATCGTCAATTTTGTACTaGACATCCCCGAGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMASSILY*TSPSLV
Trigger: AACCAGACTCGGGGATGTGCAGTACAAAATTGACGA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTAGTACTCCTCCCCACTaGTGCTCTCCATGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFSTPPH*CSPWQR
Trigger: TCTTTGCCATGGAGAGCAGCAGTGGGGAGGAGTACT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTTTAAAAACTGGATGTTaGTGCTACTGTCTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFLKTGC*CYCLQA
Trigger: AGCTTGCAGACAGTAGCAGCAACATCCAGTTTTTAA...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATTTGCGTCTCTTTTCTaGGTAGACCCAGAACAAGTG +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAFASLF*VDPEQV
Trigger: CACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGGACCTGAGAGTTAAGTaGTGGATGGTATTATTTCAC +
Preference number: 4 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSDLRVK*WMVLFH
Trigger: GTGAAATAATACCATCCAGCACTTAACTCTCAGGTC...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTGTAGCGACACTCTTTaGCACAGCGTCCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFCSDTL*HSVLWS
Trigger: TGACCAGAGGACGCTGTGGCAAAGAGTGTCGCTACA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS-3UTR GCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGTGCGTAACTCCAAGATaGTGGTCACATTTCGAGAGG +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRCVTPR*WSHFER
Trigger: CCTCTCGAAATGTGACCAGCATCTTGGAGTTACGCA...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATATACTGGGCATGAGATaGTGGAAGTCCTCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADILGMR*WKSSSY
Trigger: ATAAGAAGAGGACTTCCACCATCTCATGCCCAGTAT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGGTGTAGCCGTATTTTaGGTACTTGACAAAAGACAC +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADGVAVF*VLDKRH
Trigger: GTGTCTTTTGTCAAGTACCCAAAATACGGCTACACC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGAGCGAAGTTTCACATTaGAACCAGGGAGCTCGATTT +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVSEVSH*NQGARF
Trigger: AAATCGAGCTCCCTGGTTCCAATGTGAAACTTCGCT...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAAGCGAAGTTTCACATTaGAACCAGGGAGCTCGATTT +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMASEVSH*NQGARF
Trigger: AAATCGAGCTCCCTGGTTCCAATGTGAAACTTCGCT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGCCTGGAATGACTTCTaGAAGAGATGCCCCTCGACA +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFAWNDF*KRCPST
Trigger: TGTCGAGGGGCATCTCTTCCAGAAGTCATTCCAGGC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTGCTGGGTCAGGAACTaGTTTTCCCCAGTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFCWVRN*FSPVPL
Trigger: CAAAGGCACTGGGGAAAACCAGTTCCTGACCCAGCA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTGTGAGAAATGGCAATaGCACTGGCTGACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFCEKWQ*HWLTPG
Trigger: CCCTGGAGTCAGCCAGTGCCATTGCCATTTCTCACA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CGAAAATGTCAGAAGTATTTGTCCTACAAGCAGTCTGAGTGGTTTGTCCCGCAGGGTCTGCAATGTAAATaGTACCATCTGGAGCTACAG +
Preference number: 4 (lower is better)
Translates to: RKCQKYLSYKQSEWFVPQGLQCK*YHLELQ
Trigger: CTGTAGCTCCAGATGGTACCATTTACATTGCAGACC...CTGCGGGACAAACCACTCAGACTGCTTGTAGGACAAATACTTCTGACATTTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTCGTCATCATCACGGTTaGAGTTCTCAATGTCAATGG +
Preference number: 4 (lower is better)
Translates to: TSTETDTHELRNLNRLHPRHHHG*SSQCQW
Trigger: CCATTGACATTGAGAACTCCAACCGTGATGATGACG...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGCGTCATCATCACGGTTaGAGTTCTCAATGTCAATGG +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVRHHHG*SSQCQW
Trigger: CCATTGACATTGAGAACTCCAACCGTGATGATGACG...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATTAGGCGCCACTCAATaGAGTTTAAGCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMALGATQ*SLSHSP
Trigger: TGGAGAATGGCTTAAACTCCATTGAGTGGCGCCTAA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTACGGATGTAGCCGATaGAGGTGTGTGTGGACATGC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFYGCSR*RCVWTC
Trigger: GCATGTCCACACACACCTCCATCGGCTACATCCGTA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ACTACGGAATCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAGAAGCCCCCACTTTaGAGGTTGACCATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: TTESKQTTPCNCVLLSTMEKPPL*RLTIFK
Trigger: CTTGAAGATGGTCAACCTCCAAAGTGGGGGCTTCTC...CATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGATTCCGTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATGTACTTCGTGGTATTaGCATAGGGCCCCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMACTSWY*HRAPVL
Trigger: TAAAACTGGGGCCCTATGCCAATACCACGAAGTACA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CGAAAATGTCAGAAGTATTTGTCCTACAAGCAGTCTGAGTGGTTTGTCCCGCAGTCTGGAAGTCGGGGTTaGAGTCATAATAAATCTCCC +
Preference number: 4 (lower is better)
Translates to: RKCQKYLSYKQSEWFVPQSGSRG*SHNKSP
Trigger: GGGAGATTTATTATGACTCCAACCCCGACTTCCAGA...CTGCGGGACAAACCACTCAGACTGCTTGTAGGACAAATACTTCTGACATTTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGTATTTTAGGGGAACTTaGAACATTGTGTGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWYFRGT*NIVCVC
Trigger: ACAGACACACACAATGTTCCAAGTTCCCCTAAAATA...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTAGGGCTTCTTCAGCTTaGAAGCCTTCCTGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFRASSA*KPSWRK
Trigger: CTTTCTCCAGGAAGGCTTTCAAGCTGAAGAAGCCCT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTCCCGAGGGAGATGTTaGACTTTAAGAACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFSRGRC*TLRTGA
Trigger: AGCCCCAGTTCTTAAAGTTCAACATCTCCCTCGGGA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTAGTGCCACAGTCTACTaGGCACACTTCAACAGAGCA +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFSATVY*AHFNRA
Trigger: TGCTCTGTTGAAGTGTGCTCAGTAGACTGTGGCACT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTGCCTGCCAAGAGCTTaGTACGGTCATAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFCLPRA*YGHRRT
Trigger: AGTCCTTCTATGACCGTATCAAGCTCTTGGCAGGCA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGGTGATCTTCAGCAGTaGCTTGTACCCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFGDLQQ*LVPCSS
Trigger: AGAACTGCAGGGTACAAGTCACTGCTGAAGATCACC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTCTCATCTGTCTCAGTaGTGTAGAGGACCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFSHLSQ*CRGPQC
Trigger: ACACTGGGGTCCTCTACATCACTGAGACAGATGAGA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAAATAGCAGTTGCAATTaGCATCGTTTTTGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMANSSCN*HRFCSR
Trigger: GCGACTGCAAAAACGATGTCAATTGCAACTGCTATT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAGGATGCCATCAGCGTTaGAAACATATAACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTGCHQR*KHITPA
Trigger: AGCAGGAGTTATATGTTTTCAACGCTGATGGCATCC...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGCACTGTAGTCAAAGATaGCCGAAGCATTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRHCSQR*PKHCFQ
Trigger: CTGAAAGCAATGCTTCGGTCATCTTTGACTACAGTG...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCATAATCACGCTGAGTaGAGTGGACCAGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFHNHAE*SGPAWS
Trigger: TGACCAAGCTGGTCCACTTCACTCAGCGTGATTATG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCCCACATCCAGGTACTaGACAAACACGGCTTCATTC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFPTSRY*TNTASF
Trigger: GAATGAAGCCGTGTTTGTGCAGTACCTGGATGTGGG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTATCTGTTTCGGTGCCTaGCGTTTGCCTACCAATGGT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFICFGA*RLPTNG
Trigger: ACCATTGGTAGGCAAACGGCAGGCACCGAAACAGAT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGCAAAGTGTTCCACCTTaGCAGAAATCTCATCATAGC +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVQSVPP*QKSHHS
Trigger: GCTATGATGAGATTTCTGGCAAGGTGGAACACTTTG...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CCTTCTTTCTTATCTTCGCTTCTTTGTTTATTGGTCCGTGTGTTTGTTTTGTTTTATCTTCGCTGGCGATaGTGGACACGCCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: PSFLSSLLCLLVRVFVLFYLRWR*WTRPWS
Trigger: TGACCACGGGCGTGTCCAGCATCGCCAGCGAAGATA...AAACAAAACAAACACACGGACCAATAAACAAAGAAGCGAAGATAAGAAAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATCCTTTTGGACACTTTaGGTCTCTTTTCTGCGTAGA +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMASFWTL*VSFLRR
Trigger: TCTACGCAGAAAAGAGACGCAAAGTGTCCAAAAGGA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp CGAAAATGTCAGAAGTATTTGTCCTACAAGCAGTCTGAGTGGTTTGTCCCGCAGACTACACCCTGTAACTaGGTATTACTGTCCACAATG +
Preference number: 4 (lower is better)
Translates to: RKCQKYLSYKQSEWFVPQTTPCN*VLLSTM
Trigger: CATTGTGGACAGTAATACGCAGTTACAGGGTGTAGT...CTGCGGGACAAACCACTCAGACTGCTTGTAGGACAAATACTTCTGACATTTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGCCATAAATTATCTTTaGCTGTCCCTAGTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADAINYL*LSLVFA
Trigger: AGCAAAGACTAGGGACAGGCAAAGATAATTTATGGC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGGTGTAGCCGTATTTTaGGTACTTGACAAAAGACAC +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAGVAVF*VLDKRH
Trigger: GTGTCTTTTGTCAAGTACCCAAAATACGGCTACACC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ACTACGGAATCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGAGTCCATACACCCTTTaGCCATACGCATCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: TTESKQTTPCNCVLLSTMSPYTL*PYASVL
Trigger: CAAGACAGATGCGTATGGCCAAAGGGTGTATGGACT...CATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGATTCCGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACCCAGAGAATTAGACTaGGACAGGTCTCATATTCAA +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAPRELD*DRSHIQ
Trigger: TTGAATATGAGACCTGTCCCAGTCTAATTCTCTGGG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGCCCAGAGAATTAGACTaGGACAGGTCTCATATTCAA +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVPRELD*DRSHIQ
Trigger: TTGAATATGAGACCTGTCCCAGTCTAATTCTCTGGG...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGTAACTCCAAGATGCTaGTCACATTTCGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRVTPRC*SHFERE
Trigger: TTCCCTCTCGAAATGTGACCAGCATCTTGGAGTTAC...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTGTAGTACTTGTGTGCTaGGTTGTTGCTATGTTTAAA +
Preference number: 4 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFVVLVC*VVAMFK
Trigger: TTTAAACATAGCAACAACCCAGCACACAAGTACTAC...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGCTCACAGTGTATTGGTaGATGCCATCAGCGTTGAAA +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRLTVYW*MPSALK
Trigger: TTTCAACGCTGATGGCATCCACCAATACACTGTGAG...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGAAGCAGGAGGACCATaGACTTGTCAAGGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFEAGGP*TCQGRS
Trigger: ACTCCTACCTTGACAAGTCCATGGTCCTCCTGCTTC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCATAGGTGTACTTCGTaGTATTGGCATAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFHRCTS*YWHRAP
Trigger: TGGGGCCCTATGCCAATACCACGAAGTACACCTATG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGTCTCCATAAGAGATaGTCTGGCTTGCATTCAATT +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRGLHKR*SGLHSI
Trigger: AATTGAATGCAAGCCAGATCATCTCTTATGGAGACC...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CCTTCTTTCTTATCTTCGCTTCTTTGTTTATTGGTCCGTGTGTTTGTTTTGTTTTCAGTGAGTTCCTGTTaGGGGAGTTGGCGGACGAGT +
Preference number: 4 (lower is better)
Translates to: PSFLSSLLCLLVRVFVLFSVSSC*GSWRTS
Trigger: ACTCGTCCGCCAACTCCCTCAACAGGAACTCACTGA...AAACAAAACAAACACACGGACCAATAAACAAAGAAGCGAAGATAAGAAAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTAACACGGCTTCATTCTaGACCAAGGTCTGTATGCTC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFNTASF*TKVCML
Trigger: GAGCATACAGACCTTGGTTCAGAATGAAGCCGTGTT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGCGTATTTTGGGTACTTaGCAAAAGACACGTTCACAC +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRRILGT*QKTRSH
Trigger: GTGTGAACGTGTCTTTTGTCAAGTACCCAAAATACG...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAGAGTATGAAATTTTGCCATCCTGGCGGGTaGTGGTGTAGCCGTATTTTG +
Preference number: 4 (lower is better)
Translates to: TAYYCPQWNLQRQKSMKFCHPGG*WCSRIL
Trigger: CAAAATACGGCTACACCATCACCCGCCAGGATGGCA...AAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTGTCAGTACTATATGTaGAATTGTACAAGTACTCCC +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADCQYYM*NCTSTP
Trigger: GGGAGTACTTGTACAATTTCACATATAGTACTGACA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTGTCAGTACTATATGTaGAATTGTACAAGTACTCCC +
Preference number: 4 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFCQYYM*NCTSTP
Trigger: GGGAGTACTTGTACAATTTCACATATAGTACTGACA...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAGAGTATGAAATTTGATTGTAGACATGGGTaGTGCGCGTCGGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: TAYYCPQWNLQRQKSMKFDCRHG*CASGCG
Trigger: TCCACAACCCGACGCGCATCACCCATGTCTACAATC...AAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp AGTGAGGTAATTGGATATGAGGCCTTCTTTCTTATCTTCGCTTCTTTGTTTATTGTCCTACAAGCAGTCTaGGTGGTTTGTCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: SEVIGYEAFFLIFASLFIVLQAV*VVCPAA
Trigger: AGCTGCGGGACAAACCACTCAGACTGCTTGTAGGAC...AATAAACAAAGAAGCGAAGATAAGAAAGAAGGCCTCATATCCAATTACCTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGAGAGATGATCTGGCTTaGATTCAATTGTGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRRDDLA*IQLCQQ
Trigger: TTGCTGGCACAATTGAATGCAAGCCAGATCATCTCT...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTCCAGATGGCATTGTTaGCACATCATCGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFSRWHC*HIIVSW
Trigger: CCAGGAAACGATGATGTGGCAACAATGCCATCTGGA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCTCGGCATTCACATTTaGCATCTTTACAGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFLGIHI*HLYRSR
Trigger: ACGGGACCTGTAAAGATGGCAAATGTGAATGCCGAG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACAAGTAGTACTTGTGTaGTGGGTTGTTGCTATGTTT +
Preference number: 4 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAQVVLV*WVVAMF
Trigger: AAACATAGCAACAACCCAGCACACAAGTACTACTTG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCCCATTCTTGTCTACTaGAATACCTCTCGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFPILVY*NTSRAH
Trigger: ATGAGCCCGAGAGGTATTGCAGTAGACAAGAATGGG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ACTACGGAATCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGAAAACTGGATGTTGCTaGTACTGTCTGCAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TTESKQTTPCNCVLLSTMKTGCC*YCLQAL
Trigger: CAGAGCTTGCAGACAGTAGCAGCAACATCCAGTTTT...CATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGATTCCGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTTCCATAGTGCATCCTaGTGTCATGGTCATAGGCCT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFFHSAS*CHGHRP
Trigger: AGGCCTATGACCATGACAGCAGGATGCACTATGGAA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS-3UTR CCA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAATACTGGGCATGAGATaGTGGAAGTCCTCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTILGMR*WKSSSY
Trigger: ATAAGAAGAGGACTTCCACCATCTCATGCCCAGTAT...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTATGATGCTGACTTGGTaGTTCTCGGTGATTCGAAGG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFMMLTW*FSVIRR
Trigger: CCTTCGAATCACCGAGAACCACCAAGTCAGCATCAT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAGATGCAGCCTCATACTaGTTGAAGGCATTAAGAACA +
Preference number: 4 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTDAASY*LKALRT
Trigger: TGTTCTTAATGCCTTCAACCAGTATGAGGCTGCATC...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGCTAGGACAACAGTATTaGAGGAAACCATCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRLGQQY*RKPSLC
Trigger: ACAAAGAGATGGTTTCCTTCAATACTGTTGTCCTAG...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGTAGGCATCATCTCCTaGATAGCAGTTGCAATTGAC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFVGIIS*IAVAID
Trigger: GTCAATTGCAACTGCTATTCAGGAGATGATGCCTAC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGTGTCAGTACTATATGTaGAATTGTACAAGTACTCCC +
Preference number: 4 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVCQYYM*NCTSTP
Trigger: GGGAGTACTTGTACAATTTCACATATAGTACTGACA...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAGAGTATGAAATTTAGTCAAACCTGGCATTaGCCATGCCTTCCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: TAYYCPQWNLQRQKSMKFSQTWH*PCLPRR
Trigger: TCTCCGAGGAAGGCATGGTCAATGCCAGGTTTGACT...AAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGATGATGTTGCTAAGCTaGAATCCAAACATCACAAGC +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRMMLLS*NPNITS
Trigger: GCTTGTGATGTTTGGATTTCAGCTTAGCAACATCAT...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTAACAGTTACTCCTGCTaGGCCATTCAGACAAGGAAT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFNSYSC*AIQTRN
Trigger: ATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAGAGTATGAAATTTAGCCATCTGTTTCGGTaGCTGCCGTTTGCCTACCAA +
Preference number: 4 (lower is better)
Translates to: TAYYCPQWNLQRQKSMKFSHLFR*LPFAYQ
Trigger: TTGGTAGGCAAACGGCAGGCACCGAAACAGATGGCT...AAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp ACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAGAGTATGAAATTTGGTGCTATCCTTGCCTaGCAAGAGCTTGATACGGTC +
Preference number: 4 (lower is better)
Translates to: TAYYCPQWNLQRQKSMKFGAILA*QELDTV
Trigger: GACCGTATCAAGCTCTTGGCAGGCAAGGATAGCACC...AAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATAATATTTCCAAGGTCTaGAATGTAAATGGTACCATC +
Preference number: 4 (lower is better)
Translates to: EEITVTPAEPFRQGMAADNISKV*NVNGTI
Trigger: GATGGTACCATTTACATTGCAGACCTTGGAAATATT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTCGTCAATTTTGTACTaGACATCCCCGAGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFSSILY*TSPSLV
Trigger: AACCAGACTCGGGGATGTGCAGTACAAAATTGACGA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTAAAACTGGATGTTGCTaGTACTGTCTGCAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFKTGCC*YCLQAL
Trigger: CAGAGCTTGCAGACAGTAGCAGCAACATCCAGTTTT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCTGGGCATGAGATGGTaGAAGTCCTCTTCTTATGTA +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFLGMRW*KSSSYV
Trigger: TACATAAGAAGAGGACTTCCACCATCTCATGCCCAG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTCTGTAGTTACTACTTaGCCTCGGATGAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFSVVTT*PRMRET
Trigger: GGTTTCTCTCATCCGAGGCCAAGTAGTAACTACAGA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp AGTGAGGTAATTGGATATGAGGCCTTCTTTCTTATCTTCGCTTCTTTGTTTATTAGGTGTAGGCCAGGTTaGGAGAAGCCTGGAATGACT +
Preference number: 4 (lower is better)
Translates to: SEVIGYEAFFLIFASLFIRCRPG*EKPGMT
Trigger: AGTCATTCCAGGCTTCTCCCAACCTGGCCTACACCT...AATAAACAAAGAAGCGAAGATAAGAAAGAAGGCCTCATATCCAATTACCTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGTAACTCCAAGATGCTaGTCACATTTCGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFVTPRC*SHFERE
Trigger: TTCCCTCTCGAAATGTGACCAGCATCTTGGAGTTAC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp AGTGAGGTAATTGGATATGAGGCCTTCTTTCTTATCTTCGCTTCTTTGTTTATTAAATGGCAATGGCACTaGCTGACTCCAGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: SEVIGYEAFFLIFASLFIKWQWH*LTPGQS
Trigger: ACTCTGCCCTGGAGTCAGCCAGTGCCATTGCCATTT...AATAAACAAAGAAGCGAAGATAAGAAAGAAGGCCTCATATCCAATTACCTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCTCACAGTGTATTGGTaGATGCCATCAGCGTTGAAA +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFLTVYW*MPSALK
Trigger: TTTCAACGCTGATGGCATCCACCAATACACTGTGAG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTCTGGAAGTCGGGGTTaGAGTCATAATAAATCTCCC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFSGSRG*SHNKSP
Trigger: GGGAGATTTATTATGACTCCAACCCCGACTTCCAGA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCTCTCTGTTGTCTGTTaGACACCTGTAATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFLSVVC*TPVMSC
Trigger: ACAGCTCATTACAGGTGTCCAACAGACAACAGAGAG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp AGTGAGGTAATTGGATATGAGGCCTTCTTTCTTATCTTCGCTTCTTTGTTTATTACTGTCTGCAAGCTCTaGGTATTGCTCCACGGGAAG +
Preference number: 4 (lower is better)
Translates to: SEVIGYEAFFLIFASLFITVCKL*VLLHGK
Trigger: CTTCCCGTGGAGCAATACCCAGAGCTTGCAGACAGT...AATAAACAAAGAAGCGAAGATAAGAAAGAAGGCCTCATATCCAATTACCTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp ACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAGAGTATGAAATTTAGAACTGGGGCTGACTaGTGTGAATTTGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: TAYYCPQWNLQRQKSMKFRTGAD*CEFVTS
Trigger: GGAGGTCACAAATTCACATCAGTCAGCCCCAGTTCT...AAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCGTATTTTGGGTACTTaGCAAAAGACACGTTCACAC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFRILGT*QKTRSH
Trigger: GTGTGAACGTGTCTTTTGTCAAGTACCCAAAATACG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp ACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAGAGTATGAAATTTTCTCATCTGTCTCAGTaGTGTAGAGGACCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: TAYYCPQWNLQRQKSMKFSHLSQ*CRGPQC
Trigger: ACACTGGGGTCCTCTACATCACTGAGACAGATGAGA...AAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTAATAGCAGTTGCAATTaGCATCGTTTTTGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFNSSCN*HRFCSR
Trigger: GCGACTGCAAAAACGATGTCAATTGCAACTGCTATT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp CCTTCTTTCTTATCTTCGCTTCTTTGTTTATTGGTCCGTGTGTTTGTTTTGTTTCACCTCTACCGAAACTaGTACCCACGAACTACGGAA +
Preference number: 4 (lower is better)
Translates to: PSFLSSLLCLLVRVFVLFHLYRN*YPRTTE
Trigger: TTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGTG...AAACAAAACAAACACACGGACCAATAAACAAAGAAGCGAAGATAAGAAAGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTAGAGATGATCTGGCTTaGATTCAATTGTGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFRDDLA*IQLCQQ
Trigger: TTGCTGGCACAATTGAATGCAAGCCAGATCATCTCT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCAAAGTGTTCCACCTTaGCAGAAATCTCATCATAGC +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFQSVPP*QKSHHS
Trigger: GCTATGATGAGATTTCTGGCAAGGTGGAACACTTTG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp CCTTCTTTCTTATCTTCGCTTCTTTGTTTATTGGTCCGTGTGTTTGTTTTGTTTTCTTCAAGACACCAGTaGTCTCGTCATACCCGAAGG +
Preference number: 4 (lower is better)
Translates to: PSFLSSLLCLLVRVFVLFSSRHQ*SRHTRR
Trigger: CCTTCGGGTATGACGAGACCACTGGTGTCTTGAAGA...AAACAAAACAAACACACGGACCAATAAACAAAGAAGCGAAGATAAGAAAGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCTAGGACAACAGTATTaGAGGAAACCATCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFLGQQY*RKPSLC
Trigger: ACAAAGAGATGGTTTCCTTCAATACTGTTGTCCTAG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR TCA 90 bp AGTGAGGTAATTGGATATGAGGCCTTCTTTCTTATCTTCGCTTCTTTGTTTATTGAATGGCTAGTTTGCTaGGTGAGTAGTCAATGCCAG +
Preference number: 4 (lower is better)
Translates to: SEVIGYEAFFLIFASLFIEWLVC*VSSQCQ
Trigger: CTGGCATTGACTACTCACTCAGCAAACTAGCCATTC...AATAAACAAAGAAGCGAAGATAAGAAAGAAGGCCTCATATCCAATTACCTCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp ACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAGAGTATGAAATTTCTCGGCATTCACATTTaGCATCTTTACAGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: TAYYCPQWNLQRQKSMKFLGIHI*HLYRSR
Trigger: ACGGGACCTGTAAAGATGGCAAATGTGAATGCCGAG...AAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTTAAAAACTGGATGTTaGTGCTACTGTCTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFLKTGC*CYCLQA
Trigger: AGCTTGCAGACAGTAGCAGCAACATCCAGTTTTTAA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTTGTTAGGAGGCCCTTaGAATTGTATTCGAAGATGT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFLLGGP*NCIRRC
Trigger: ACATCTTCGAATACAATTCCAAGGGCCTCCTAACAA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAGAGTATGAAATTTAGCAGCGTGGAGTACTaGAACTCAATGTTCGTGAAC +
Preference number: 4 (lower is better)
Translates to: TAYYCPQWNLQRQKSMKFSSVEY*NSMFVN
Trigger: GTTCACGAACATTGAGTTCCAGTACTCCACGCTGCT...AAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp ACTACGGAATCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGTATTTTAGGGGAACTTaGAACATTGTGTGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: TTESKQTTPCNCVLLSTMYFRGT*NIVCVC
Trigger: ACAGACACACACAATGTTCCAAGTTCCCCTAAAATA...CATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGATTCCGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGCTGAGAGTTAAGTGCTaGATGGTATTATTTCACTTT +
Preference number: 4 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRLRVKC*MVLFHF
Trigger: AAAGTGAAATAATACCATCCAGCACTTAACTCTCAG...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp ACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAGAGTATGAAATTTGTAGGCATCATCTCCTaGATAGCAGTTGCAATTGAC +
Preference number: 4 (lower is better)
Translates to: TAYYCPQWNLQRQKSMKFVGIIS*IAVAID
Trigger: GTCAATTGCAACTGCTATTCAGGAGATGATGCCTAC...AAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp ACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAGAGTATGAAATTTTTCGTAACTCCAAGATaGTGGTCACATTTCGAGAGG +
Preference number: 4 (lower is better)
Translates to: TAYYCPQWNLQRQKSMKFFVTPR*WSHFER
Trigger: CCTCTCGAAATGTGACCAGCATCTTGGAGTTACGAA...AAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp CCTTCTTTCTTATCTTCGCTTCTTTGTTTATTGGTCCGTGTGTTTGTTTTGTTTTTTGCGTCTCTTTTCTaGGTAGACCCAGAACAAGTG +
Preference number: 4 (lower is better)
Translates to: PSFLSSLLCLLVRVFVLFFASLF*VDPEQV
Trigger: CACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAA...AAACAAAACAAACACACGGACCAATAAACAAAGAAGCGAAGATAAGAAAGAAGG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp AGTGAGGTAATTGGATATGAGGCCTTCTTTCTTATCTTCGCTTCTTTGTTTATTAAAGTGTCACGATGCTaGACCTCTACCGAAACTGAT +
Preference number: 4 (lower is better)
Translates to: SEVIGYEAFFLIFASLFIKVSRC*TSTETD
Trigger: ATCAGTTTCGGTAGAGGTGCAGCATCGTGACACTTT...AATAAACAAAGAAGCGAAGATAAGAAAGAAGGCCTCATATCCAATTACCTCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTTCTGTCTTAAAAACTaGATGTTGCTGCTACTGTCT +
Preference number: 4 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFFCLKN*MLLLLS
Trigger: AGACAGTAGCAGCAACATCCAGTTTTTAAGACAGAA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CCA 90 bp ACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAGAGTATGAAATTTCAGGGTGATCAGAAGTaGTACCTGTTAGCAAAAGTG +
Preference number: 4 (lower is better)
Translates to: TAYYCPQWNLQRQKSMKFQGDQK*YLLAKV
Trigger: CACTTTTGCTAACAGGTACCACTTCTGATCACCCTG...AAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp CCTTCTTTCTTATCTTCGCTTCTTTGTTTATTGGTCCGTGTGTTTGTTTTGTTTTCCTTTTGGACACTTTaGGTCTCTTTTCTGCGTAGA +
Preference number: 4 (lower is better)
Translates to: PSFLSSLLCLLVRVFVLFSFWTL*VSFLRR
Trigger: TCTACGCAGAAAAGAGACGCAAAGTGTCCAAAAGGA...AAACAAAACAAACACACGGACCAATAAACAAAGAAGCGAAGATAAGAAAGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR TCA 90 bp ACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAGAGTATGAAATTTTTAAATCTGAAACAGTaGTTGTGCCTTTCGGCTCAT +
Preference number: 4 (lower is better)
Translates to: TAYYCPQWNLQRQKSMKFLNLKQ*LCLSAH
Trigger: ATGAGCCGAAAGGCACAATCACTGTTTCAGATTTAA...AAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR GCA 90 bp CCTTCTTTCTTATCTTCGCTTCTTTGTTTATTGGTCCGTGTGTTTGTTTTGTTTTTAAAAACTGGATGTTaGTGCTACTGTCTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: PSFLSSLLCLLVRVFVLFLKTGC*CYCLQA
Trigger: AGCTTGCAGACAGTAGCAGCAACATCCAGTTTTTAA...AAACAAAACAAACACACGGACCAATAAACAAAGAAGCGAAGATAAGAAAGAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CCA 90 bp CCTTCTTTCTTATCTTCGCTTCTTTGTTTATTGGTCCGTGTGTTTGTTTTGTTTTTCTGTCTTAAAAACTaGATGTTGCTGCTACTGTCT +
Preference number: 4 (lower is better)
Translates to: PSFLSSLLCLLVRVFVLFFCLKN*MLLLLS
Trigger: AGACAGTAGCAGCAACATCCAGTTTTTAAGACAGAA...AAACAAAACAAACACACGGACCAATAAACAAAGAAGCGAAGATAAGAAAGAAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS CCA 90 bp GAGGCCCGTGTCAGGCAGGTACGTGCCATGCCCACTGCACTGGTCTaGGCACTGGACCCTCGCCAGCTCACAGTTCAGACCACCCCAGCC +
Preference number: 5 (lower is better)
Translates to: EARVRQVRAMPTALV*ALDPRQLTVQTTPA
Trigger: GGCTGGGGTGGTCTGAACTGTGAGCTGGCGAGGGTCCAGTGCCCAGACCAGTGCAGTGGGCATGGCACGTACCTGCCTGACACGGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 90 bp GGGCGCTGGGGCCGGGGCGTGGATCTGACTCCGCCGATTGGTCAGTaGGTTCCTGTTGAGGGAGTTGGCGGACGAGTGGTGATGGGACAG +
Preference number: 5 (lower is better)
Translates to: GRWGRGVDLTPPIGQ*VPVEGVGGRVVMGQ
Trigger: CTGTCCCATCACCACTCGTCCGCCAACTCCCTCAACAGGAACTCACTGACCAATCGGCGGAGTCAGATCCACGCCCCGGCCCCAGCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518659.5
ENST00000518693.1
ENST00000519204.5
ENST00000520393.5
ENST00000520394.5
ENST00000522488.1
CDS GCA 90 bp TTGGGATCGCAGCTGCAGAGGCCCGTGTCAGGCAGGTACGTGCCATaGCCACTGCACTGGTCTGGGCACTGGACCCTCGCCAGCTCACAG +
Preference number: 5 (lower is better)
Translates to: LGSQLQRPVSGRYVP*PLHWSGHWTLASSQ
Trigger: CTGTGAGCTGGCGAGGGTCCAGTGCCCAGACCAGTGCAGTGGGCATGGCACGTACCTGCCTGACACGGGCCTCTGCAGCTGCGATCCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 90 bp GTTGGCGGACGAGTGGTGATGGGACAGCGTGTGGTTGTGAGGGGGTaGGAGAGGGGGCCTCAGAGTCGACTGGCTGTGGTGGTTCGGAGG +
Preference number: 5 (lower is better)
Translates to: VGGRVVMGQRVVVRG*ERGPQSRLAVVVRR
Trigger: CCTCCGAACCACCACAGCCAGTCGACTCTGAGGCCCCCTCTCCCACCCCCTCACAACCACACGCTGTCCCATCACCACTCGTCCGCCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000518659.5
ENST00000518693.1
ENST00000519204.5
ENST00000520393.5
ENST00000520394.5
ENST00000522488.1
CDS CCA 90 bp CTGCAGAGGCCCGTGTCAGGCAGGTACGTGCCATGCCCACTGCACTaGTCTGGGCACTGGACCCTCGCCAGCTCACAGTTCAGACCACCC +
Preference number: 5 (lower is better)
Translates to: LQRPVSGRYVPCPLH*SGHWTLASSQFRPP
Trigger: GGGTGGTCTGAACTGTGAGCTGGCGAGGGTCCAGTGCCCAGACCAGTGCAGTGGGCATGGCACGTACCTGCCTGACACGGGCCTCTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TGTCCCGCAGCTGGTCTGGTGACGCTGGCCCTCGCGGATGTCTGCGTGTCGCTCTGTGTGGACACGACTTaGAGGCCTCCATTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: CPAAGLVTLALADVCVSLCVDTT*RPPLVP
Trigger: GGGCACCAATGGAGGCCTCAAAGTCGTGTCCACACA...GAGCGACACGCAGACATCCGCGAGGGCCAGCGTCACCAGACCAGCTGCGGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp TGTCCCGCAGCTGGTCTGGTGACGCTGGCCCTCGCGGATGTCTGCGTGTCGCTCAGCAGTCTGAGTGGTTaGTCCCGCAGCTGGTCTGGT +
Preference number: 5 (lower is better)
Translates to: CPAAGLVTLALADVCVSLSSLSG*SRSWSG
Trigger: ACCAGACCAGCTGCGGGACAAACCACTCAGACTGCT...GAGCGACACGCAGACATCCGCGAGGGCCAGCGTCACCAGACCAGCTGCGGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS TCA 90 bp CATGGCCCCACGCTGAAGCCCAGCCAGGCGCCCATTGAAGAAGTATaGCACGTTGACAGCTGCCAGCCCGCTGCTGGGCAGCCAGAGGAA +
Preference number: 5 (lower is better)
Translates to: HGPTLKPSQAPIEEV*HVDSCQPAAGQPEE
Trigger: TTCCTCTGGCTGCCCAGCAGCGGGCTGGCAGCTGTCAACGTGTCATACTTCTTCAATGGGCGCCTGGCTGGGCTTCAGCGTGGGGCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGTGGGGCGCGTCACGTaGGTCAGGCGGCCTTCGTGG +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSVGRVT*VRRPSW
Trigger: CCACGAAGGCCGCCTGACCAACGTGACGCGCCCCAC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 90 bp CATAGAAGGACTTCACTGCGGGCCAATCCGTCTGGCCCTGCTGAATaGTGTCCAGTGGGTCCCGGGACCCCCGGCAGAGCAGGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: HRRTSLRANPSGPAE*CPVGPGTPGRAGCS
Trigger: AGAACAGCCTGCTCTGCCGGGGGTCCCGGGACCCACTGGACATCATTCAGCAGGGCCAGACGGATTGGCCCGCAGTGAAGTCCTTCTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
ENST00000521126.1
CDS CCA 90 bp GCCCTGGTGAAGGATCCCCATGTCGGAGCAGTAGCCGCTTCGGTGTaGGGAGGGCTCACAGATGCCCAGTTCGGCAAGGGTGAAGTTGGT +
Preference number: 5 (lower is better)
Translates to: ALVKDPHVGAVAASV*GGLTDAQFGKGEVG
Trigger: ACCAACTTCACCCTTGCCGAACTGGGCATCTGTGAGCCCTCCCCACACCGAAGCGGCTACTGCTCCGACATGGGGATCCTTCACCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS-3UTR CAA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGGTGGTGGCCAGGTCATaGGGCGCTGGGGCCGGGGCG +
Preference number: 5 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWVVARS*GAGAGA
Trigger: CGCCCCGGCCCCAGCGCCCAATGACCTGGCCACCAC...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS TCA 90 bp CCGGGGCGTGGATCTGACTCCGCCGATTGGTCAGTGAGTTCCTGTTaGGGGAGTTGGCGGACGAGTGGTGATGGGACAGCGTGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: PGRGSDSADWSVSSC*GSWRTSGDGTACGC
Trigger: ACAACCACACGCTGTCCCATCACCACTCGTCCGCCAACTCCCTCAACAGGAACTCACTGACCAATCGGCGGAGTCAGATCCACGCCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518659.5
ENST00000518693.1
ENST00000519204.5
ENST00000520393.5
ENST00000520394.5
ENST00000522488.1
CDS TCA 90 bp ACAGGCCGGAACTGCGCCTGGATTTTATCCCTCTGCCCCACAGTCTaGTGGCGTGTTCTGGAGACATCCCTCCCTCGGTGTCGGAGTCGG +
Preference number: 5 (lower is better)
Translates to: TGRNCAWILSLCPTV*WRVLETSLPRCRSR
Trigger: CCGACTCCGACACCGAGGGAGGGATGTCTCCAGAACACGCCATCAGACTGTGGGGCAGAGGGATAAAATCCAGGCGCAGTTCCGGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS GCA 90 bp ACACTTCAACAGAGCAGTCGGGACCCATCCAGTTGGGATCGCAGCTaGAGAGGCCCGTGTCAGGCAGGTACGTGCCATGCCCACTGCACT +
Preference number: 5 (lower is better)
Translates to: TLQQSSRDPSSWDRS*RGPCQAGTCHAHCT
Trigger: AGTGCAGTGGGCATGGCACGTACCTGCCTGACACGGGCCTCTGCAGCTGCGATCCCAACTGGATGGGTCCCGACTGCTCTGTTGAAGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGGTGGTGGCCAGGTCATaGGGCGCTGGGGCCGGGGCG +
Preference number: 5 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSVVARS*GAGAGA
Trigger: CGCCCCGGCCCCAGCGCCCAATGACCTGGCCACCAC...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TGTCCCGCAGCTGGTCTGGTGACGCTGGCCCTCGCGGATGTCTGCGTGTCGCTCCAATTGACATCGTTTTaGCAGTCGCAGTCCGAGGCT +
Preference number: 5 (lower is better)
Translates to: CPAAGLVTLALADVCVSLQLTSF*QSQSEA
Trigger: AGCCTCGGACTGCGACTGCAAAAACGATGTCAATTG...GAGCGACACGCAGACATCCGCGAGGGCCAGCGTCACCAGACCAGCTGCGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACTTCGAGTCCTGCCGTaGACCAGCAGCGTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSLRVLP*TSSVGW
Trigger: CCAGCCCACGCTGCTGGTCAACGGCAGGACTCGAAG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 90 bp GTGCCCACGGTGAGGGTGATGATCTGGTTGTCAGGCATGAGCAGGTaGCGGGGCATGCCACTGCTGTCCCGACGGATCTTCAGGGAATTC +
Preference number: 5 (lower is better)
Translates to: VPTVRVMIWLSGMSR*RGMPLLSRRIFREF
Trigger: GAATTCCCTGAAGATCCGTCGGGACAGCAGTGGCATGCCCCGTCACCTGCTCATGCCTGACAACCAGATCATCACCCTCACCGTGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 90 bp AGGAGTAGCTCCACACTTTCCCGTCAGCGAACATGCGGGACACGATaGGGCCTTGCTTGTCGATGTCTGTCCTCTCGCTCATGGCCCCAC +
Preference number: 5 (lower is better)
Translates to: RSSSTLSRQRTCGTR*GLACRCLSSRSWPH
Trigger: GTGGGGCCATGAGCGAGAGGACAGACATCGACAAGCAAGGCCGCATCGTGTCCCGCATGTTCGCTGACGGGAAAGTGTGGAGCTACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 90 bp GCATCTTGTCCAGGTAGTAGGCGTTGTTCAGCACAGATGCCACCTTaGGGCTATCTTCGCTGGCGATGCTGGACACGCCCGTGGTCACCC +
Preference number: 5 (lower is better)
Translates to: ASCPGSRRCSAQMPP*GYLRWRCWTRPWSP
Trigger: GGGTGACCACGGGCGTGTCCAGCATCGCCAGCGAAGATAGCCGCAAGGTGGCATCTGTGCTGAACAACGCCTACTACCTGGACAAGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 90 bp TTTCCCGGTGCAGACTGGTTACCACCCCCGTGGGGCGCGTCACGTTaGTCAGGCGGCCTTCGTGGTCATAGTCATAGAAAGTCGTCCATC +
Preference number: 5 (lower is better)
Translates to: FPGADWLPPPWGASR*SGGLRGHSHRKSSI
Trigger: GATGGACGACTTTCTATGACTATGACCACGAAGGCCGCCTGACCAACGTGACGCGCCCCACGGGGGTGGTAACCAGTCTGCACCGGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATCGGGACCCATCCAGTaGGGATCGCAGCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSSGPIQ*GSQLQR
Trigger: CCTCTGCAGCTGCGATCCCAACTGGATGGGTCCCGA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAATATCCCTCGTACCCTaGCACGCGCCCGGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSISLVP*HAPGAQ
Trigger: CTGAGCACCGGGCGCGTGCAAGGGTACGAGGGATAT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 90 bp TCGGAGGGCCACTGCTGGAGGCTTGCTGGGGCCCTGAGCATGCTCTaGGCAGGTATGAATTGGGGGAGAATTCCTCATCAGGGTTGGTGT +
Preference number: 5 (lower is better)
Translates to: SEGHCWRLAGALSML*AGMNWGRIPHQGWC
Trigger: ACACCAACCCTGATGAGGAATTCTCCCCCAATTCATACCTGCTCAGAGCATGCTCAGGGCCCCAGCAAGCCTCCAGCAGTGGCCCTCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000517586.1
ENST00000518659.5
ENST00000519204.5
ENST00000520393.5
CDS TCA 90 bp CGGCCTTGCTTGTCGATGTCTGTCCTCTCGCTCATGGCCCCACGCTaGAGCCCAGCCAGGCGCCCATTGAAGAAGTATGACACGTTGACA +
Preference number: 5 (lower is better)
Translates to: RPCLSMSVLSLMAPR*SPARRPLKKYDTLT
Trigger: TGTCAACGTGTCATACTTCTTCAATGGGCGCCTGGCTGGGCTTCAGCGTGGGGCCATGAGCGAGAGGACAGACATCGACAAGCAAGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 90 bp CACACTGCCAGCTGTTCTGACCCAGTGTGCATCTCCCGTTACCGTTaGACAAGTCAGGGCAGCCATCTGTTTCGGTGCCTGCCGTTTGCC +
Preference number: 5 (lower is better)
Translates to: HTASCSDPVCISRYR*TSQGSHLFRCLPFA
Trigger: GGCAAACGGCAGGCACCGAAACAGATGGCTGCCCTGACTTGTGCAACGGTAACGGGAGATGCACACTGGGTCAGAACAGCTGGCAGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 90 bp CCCCAGCCAGGGCTGCACAGGCATTCTCCATTCACACAGACTCCGTaGCTGGAGCAGGTGGGATCCAAGCAATCAACTTCCTCACAGTGC +
Preference number: 5 (lower is better)
Translates to: PQPGLHRHSPFTQTP*LEQVGSKQSTSSQC
Trigger: GCACTGTGAGGAAGTTGATTGCTTGGATCCCACCTGCTCCAGCCACGGAGTCTGTGTGAATGGAGAATGCCTGTGCAGCCCTGGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 90 bp AGTCTACTGAGCACACTTCAACAGAGCAGTCGGGACCCATCCAGTTaGGATCGCAGCTGCAGAGGCCCGTGTCAGGCAGGTACGTGCCAT +
Preference number: 5 (lower is better)
Translates to: SLLSTLQQSSRDPSS*DRSCRGPCQAGTCH
Trigger: ATGGCACGTACCTGCCTGACACGGGCCTCTGCAGCTGCGATCCCAACTGGATGGGTCCCGACTGCTCTGTTGAAGTGTGCTCAGTAGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGTGGTGGCCAGGTCATaGGGCGCTGGGGCCGGGGCG +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAVVARS*GAGAGA
Trigger: CGCCCCGGCCCCAGCGCCCAATGACCTGGCCACCAC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACCCTGGTGGGACTTCTaGTGTTACCCGCCGACCAAC +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSPWWDF*CYPPTN
Trigger: GTTGGTCGGCGGGTAACACAAGAAGTCCCACCAGGG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAAAGGGGGCCGGCTCCTaGCCCACGTTTTTCCACATG +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSKGAGS*PTFFHM
Trigger: CATGTGGAAAAACGTGGGCAAGGAGCCGGCCCCCTT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGGCTTTCTGCTGCTCCTaGGCCCAGGCCGTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWAFCCS*AQAVPR
Trigger: CCTGGGCACGGCCTGGGCCAAGGAGCAGCAGAAAGC...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS GCA 90 bp AGTGCTCGCCTTTGTAGCCAGCAGAGCAGACACAGTTCCCATCAATaGAGGAGCCGTGGCCCCCGCAGGAAGGATCGATGCACTGATTCA +
Preference number: 5 (lower is better)
Translates to: SARLCSQQSRHSSHQ*RSRGPRRKDRCTDS
Trigger: TGAATCAGTGCATCGATCCTTCCTGCGGGGGCCACGGCTCCTGCATTGATGGGAACTGTGTCTGCTCTGCTGGCTACAAAGGCGAGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 90 bp GCTGTAGTGCATCTTGTCCAGGTAGTAGGCGTTGTTCAGCACAGATaGCACCTTGCGGCTATCTTCGCTGGCGATGCTGGACACGCCCGT +
Preference number: 5 (lower is better)
Translates to: AVVHLVQVVGVVQHR*HLAAIFAGDAGHAR
Trigger: ACGGGCGTGTCCAGCATCGCCAGCGAAGATAGCCGCAAGGTGGCATCTGTGCTGAACAACGCCTACTACCTGGACAAGATGCACTACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 90 bp GGCAGTCCTCACTGTCCAGAGAGGAGCTTGTGTAGCGACACTCTTTaGCACAGCGTCCTCTGGTCAAAGAGCGGTGTCGCCGGTCCTTTA +
Preference number: 5 (lower is better)
Translates to: GSPHCPERSLCSDTL*HSVLWSKSGVAGPL
Trigger: TAAAGGACCGGCGACACCGCTCTTTGACCAGAGGACGCTGTGGCAAAGAGTGTCGCTACACAAGCTCCTCTCTGGACAGTGAGGACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS CCA 90 bp GCAGCTAACTGGTGGAGGATTATGGGAGCTAGGCAGCTGAGCAGATaGGAGGAGACTAGGCGAGGATGTAGGTGGAATGGGACGACCCAG +
Preference number: 5 (lower is better)
Translates to: AANWWRIMGARQLSR*EETRRGCRWNGTTQ
Trigger: CTGGGTCGTCCCATTCCACCTACATCCTCGCCTAGTCTCCTCCCATCTGCTCAGCTGCCTAGCTCCCATAATCCTCCACCAGTTAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS CCA 90 bp AGCCAGGGCTGCACAGGCATTCTCCATTCACACAGACTCCGTGGCTaGAGCAGGTGGGATCCAAGCAATCAACTTCCTCACAGTGCTCGC +
Preference number: 5 (lower is better)
Translates to: SQGCTGILHSHRLRG*SRWDPSNQLPHSAR
Trigger: GCGAGCACTGTGAGGAAGTTGATTGCTTGGATCCCACCTGCTCCAGCCACGGAGTCTGTGTGAATGGAGAATGCCTGTGCAGCCCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 90 bp CCAATGGTGGGGGTGATGGTGCCCGCTAGGACATGGGGCTCGCTGTaGAAGCTGATACCCATCCCATTAGCATACATCACCCTCAGGGTA +
Preference number: 5 (lower is better)
Translates to: PMVGVMVPARTWGSL*KLIPIPLAYITLRV
Trigger: TACCCTGAGGGTGATGTATGCTAATGGGATGGGTATCAGCTTCCACAGCGAGCCCCATGTCCTAGCGGGCACCATCACCCCCACCATTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000517941.1
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 90 bp GCAGCTAACTGGTGGAGGATTATGGGAGCTAGGCAGCTGAGCAGATaGGAGGAGACTAGGCGAGGATGTAGGTGGAATGGGACGACCTGC +
Preference number: 5 (lower is better)
Translates to: AANWWRIMGARQLSR*EETRRGCRWNGTTC
Trigger: GCAGGTCGTCCCATTCCACCTACATCCTCGCCTAGTCTCCTCCCATCTGCTCAGCTGCCTAGCTCCCATAATCCTCCACCAGTTAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520393.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGTCAGTGAGTTCCTGTaGAGGGAGTTGGCGGACGAG +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSVSEFL*RELADE
Trigger: CTCGTCCGCCAACTCCCTCAACAGGAACTCACTGAC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGTCTCCAGTGGCACGTaGCTGTTTAGCACCCAGCTG +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSVSSGT*LFSTQL
Trigger: CAGCTGGGTGCTAAACAGCAACGTGCCACTGGAGAC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACATCTCCCGTTACCGTaGCACAAGTCAGGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSHLPLP*HKSGQP
Trigger: TGGCTGCCCTGACTTGTGCAACGGTAACGGGAGATG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGTGGGGCGCGTCACGTaGGTCAGGCGGCCTTCGTGG +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADVGRVT*VRRPSW
Trigger: CCACGAAGGCCGCCTGACCAACGTGACGCGCCCCAC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGGACACGATGCGGCCTaGCTTGTCGATGTCTGTCCT +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSGHDAA*LVDVCP
Trigger: AGGACAGACATCGACAAGCAAGGCCGCATCGTGTCC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATCATACTGGACCTCCTaGATCCGCCCATGGGTGTCG +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSSYWTS*IRPWVS
Trigger: CGACACCCATGGGCGGATCAAGGAGGTCCAGTATGA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGCCGCTCTCTAGCACCTaGCGGCCGATGGTGGTGCCT +
Preference number: 5 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWPLSST*RPMVVP
Trigger: AGGCACCACCATCGGCCGCAAGGTGCTAGAGAGCGG...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS TCA 90 bp TGCCACAGGCCCACATCCAGGTACTGCACAAACACGGCTTCATTCTaGACCAAGGTCTGTATGCTCCGGCGTTCCCTGGGAGACTCAACC +
Preference number: 5 (lower is better)
Translates to: CHRPTSRYCTNTASF*TKVCMLRRSLGDST
Trigger: GGTTGAGTCTCCCAGGGAACGCCGGAGCATACAGACCTTGGTTCAGAATGAAGCCGTGTTTGTGCAGTACCTGGATGTGGGCCTGTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 90 bp CGTAAAAGCTGTTCCACGGCAGCCACACAGTGCGCTCCTGGCTCATaGACGGGGCTCGCTCAAAGTGTAGAGTCAAGGAAGCACCTCCAT +
Preference number: 5 (lower is better)
Translates to: RKSCSTAATQCAPGS*TGLAQSVESRKHLH
Trigger: ATGGAGGTGCTTCCTTGACTCTACACTTTGAGCGAGCCCCGTTCATGAGCCAGGAGCGCACTGTGTGGCTGCCGTGGAACAGCTTTTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 90 bp ACTTGTCAAGGTAGGAGTAGCTCCACACTTTCCCGTCAGCGAACATaGGGGACACGATGCGGCCTTGCTTGTCGATGTCTGTCCTCTCGC +
Preference number: 5 (lower is better)
Translates to: TCQGRSSSTLSRQRT*GTRCGLACRCLSSR
Trigger: GCGAGAGGACAGACATCGACAAGCAAGGCCGCATCGTGTCCCGCATGTTCGCTGACGGGAAAGTGTGGAGCTACTCCTACCTTGACAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 90 bp ATGTTGCAGCGTCCAATGGTGGGGGTGATGGTGCCCGCTAGGACATaGGGCTCGCTGTGGAAGCTGATACCCATCCCATTAGCATACATC +
Preference number: 5 (lower is better)
Translates to: MLQRPMVGVMVPART*GSLWKLIPIPLAYI
Trigger: GATGTATGCTAATGGGATGGGTATCAGCTTCCACAGCGAGCCCCATGTCCTAGCGGGCACCATCACCCCCACCATTGGACGCTGCAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000517941.1
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 90 bp CCCGCCGTCCTACGCCATCATAGCGGTACTGGACACTCCACCCGCTaGCCTTGTTGTAGGCTCTTGTTAGGAGGCCCTTGGAATTGTATT +
Preference number: 5 (lower is better)
Translates to: PAVLRHHSGTGHSTR*PCCRLLLGGPWNCI
Trigger: AATACAATTCCAAGGGCCTCCTAACAAGAGCCTACAACAAGGCCAGCGGGTGGAGTGTCCAGTACCGCTATGATGGCGTAGGACGGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 90 bp GCAGCTAACTGGTGGAGGATTATGGGAGCTAGGCAGCTGAGCAGATaGGAGGAGACTAGGCGAGGATGTAGGTGGAATGGGACGACCGTT +
Preference number: 5 (lower is better)
Translates to: AANWWRIMGARQLSR*EETRRGCRWNGTTV
Trigger: AACGGTCGTCCCATTCCACCTACATCCTCGCCTAGTCTCCTCCCATCTGCTCAGCTGCCTAGCTCCCATAATCCTCCACCAGTTAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATTGAGGATGTGGTGTTaGTCTAGGGACCAGCCACCG +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSLRMWC*SRDQPP
Trigger: CGGTGGCTGGTCCCTAGACAAACACCACATCCTCAA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAAGAACAGGCTTGTTCTaGCTGACCGCCCTGATCCGA +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSRTGLF*LTALIR
Trigger: TCGGATCAGGGCGGTCAGCAAGAACAAGCCTGTTCT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGCTTTCTGCTGCTCCTaGGCCCAGGCCGTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADAFCCS*AQAVPR
Trigger: CCTGGGCACGGCCTGGGCCAAGGAGCAGCAGAAAGC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATGCAAGCTCTGGGTATaGCTCCACGGGAAGCACGTA +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSCKLWV*LHGKHV
Trigger: TACGTGCTTCCCGTGGAGCAATACCCAGAGCTTGCA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 90 bp TGGAATGACTTCTGGAAGAGATGCCCCTCGACAGCCACCATCAGGTaGACCCTAATGAGGTTCAGGGGCACTGTGGACTGGGTCATGGTG +
Preference number: 5 (lower is better)
Translates to: WNDFWKRCPSTATIR*TLMRFRGTVDWVMV
Trigger: CACCATGACCCAGTCCACAGTGCCCCTGAACCTCATTAGGGTTCACCTGATGGTGGCTGTCGAGGGGCATCTCTTCCAGAAGTCATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 90 bp ATCCTTGCCTGCCAAGAGCTTGATACGGTCATAGAAGGACTTCACTaGGGGCCAATCCGTCTGGCCCTGCTGAATGATGTCCAGTGGGTC +
Preference number: 5 (lower is better)
Translates to: ILACQELDTVIEGLH*GPIRLALLNDVQWV
Trigger: GACCCACTGGACATCATTCAGCAGGGCCAGACGGATTGGCCCGCAGTGAAGTCCTTCTATGACCGTATCAAGCTCTTGGCAGGCAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
ENST00000521126.1
CDS CCA 90 bp TGGCTTGCATTCAATTGTGCCAGCAACGCTAATGATCAGGAGAGGTaGGCTCACCATCGGCGTAAGCTGGGAGTGGGCCGCTCTTCGTTT +
Preference number: 5 (lower is better)
Translates to: WLAFNCASNANDQER*AHHRRKLGVGRSSF
Trigger: AAACGAAGAGCGGCCCACTCCCAGCTTACGCCGATGGTGAGCCCACCTCTCCTGATCATTAGCGTTGCTGGCACAATTGAATGCAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS CCA 90 bp ACACGGCTTCATTCTGAACCAAGGTCTGTATGCTCCGGCGTTCCCTaGGAGACTCAACCACACTCCACTTCTCCTTCCCGTCCAGACGTT +
Preference number: 5 (lower is better)
Translates to: TRLHSEPRSVCSGVP*ETQPHSTSPSRPDV
Trigger: AACGTCTGGACGGGAAGGAGAAGTGGAGTGTGGTTGAGTCTCCCAGGGAACGCCGGAGCATACAGACCTTGGTTCAGAATGAAGCCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 90 bp AAGCATTGCTTTCAGGCGGGTTGTAAATATTACGGATGTAGCCGATaGAGGTGTGTGTGGACATGCTGTGCCGGGCCACGCTGGGCATGG +
Preference number: 5 (lower is better)
Translates to: KHCFQAGCKYYGCSR*RCVWTCCAGPRWAW
Trigger: CCATGCCCAGCGTGGCCCGGCACAGCATGTCCACACACACCTCCATCGGCTACATCCGTAATATTTACAACCCGCCTGAAAGCAATGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 90 bp GCAGCTAACTGGTGGAGGATTATGGGAGCTAGGCAGCTGAGCAGATaGGAGGAGACTAGGCGAGGATGTAGGTGGAATGGGACGACCATT +
Preference number: 5 (lower is better)
Translates to: AANWWRIMGARQLSR*EETRRGCRWNGTTI
Trigger: AATGGTCGTCCCATTCCACCTACATCCTCGCCTAGTCTCCTCCCATCTGCTCAGCTGCCTAGCTCCCATAATCCTCCACCAGTTAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517586.1
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAAACGACCAGGGCACTTaGCCTCCAGATGGCATTGTT +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSNDQGT*PPDGIV
Trigger: AACAATGCCATCTGGAGGCAAAGTGCCCTGGTCGTT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACGCAATGATGCTGACTaGGTGGTTCTCGGTGATTCG +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSRNDAD*VVLGDS
Trigger: CGAATCACCGAGAACCACCAAGTCAGCATCATTGCG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACCCCCACTTTGGAGGTaGACCATCTTCAAGACACCA +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSPPLWR*TIFKTP
Trigger: TGGTGTCTTGAAGATGGTCAACCTCCAAAGTGGGGG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATCACTTATGACGGGCTaGATGCTTGCGATGCGGAAG +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSSLMTG*MLAMRK
Trigger: CTTCCGCATCGCAAGCATCAAGCCCGTCATAAGTGA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAAGTTTTAGCTCCCTCTaGATCACCCTGCCCATGCTG +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSSFSSL*ITLPML
Trigger: CAGCATGGGCAGGGTGATCAAGAGGGAGCTAAAACT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACAGGTCGGGCGGTCATaGACGGCCACGCTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAQVGRS*TATLWS
Trigger: GCTCCAGAGCGTGGCCGTCAATGACCGCCCGACCTG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCTTCGAGTCCTGCCGTaGACCAGCAGCGTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADLRVLP*TSSVGW
Trigger: CCAGCCCACGCTGCTGGTCAACGGCAGGACTCGAAG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTGCTTTCTGCTGCTCCTaGGCCCAGGCCGTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: TSTETDTHELRNLNRLHPAFCCS*AQAVPR
Trigger: CCTGGGCACGGCCTGGGCCAAGGAGCAGCAGAAAGC...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATGTCCAGAGAGGAGCTaGTGTAGCGACACTCTTTGC +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSCPERS*CSDTLC
Trigger: GCAAAGAGTGTCGCTACACAAGCTCCTCTCTGGACA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS TCA 90 bp CAACTTCCGAATTCCCAGCCAGGTCTTTGGTTCCACTCAGAGACTTaGCGCGGTAGATTCTCCTGCTGTTGGTGTCGGACACGTAGAGCG +
Preference number: 5 (lower is better)
Translates to: QLPNSQPGLWFHSET*RGRFSCCWCRTRRA
Trigger: CGCTCTACGTGTCCGACACCAACAGCAGGAGAATCTACCGCGTCAAGTCTCTGAGTGGAACCAAAGACCTGGCTGGGAATTCGGAAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 90 bp CCAGGTACTGCACAAACACGGCTTCATTCTGAACCAAGGTCTGTATaGTCCGGCGTTCCCTGGGAGACTCAACCACACTCCACTTCTCCT +
Preference number: 5 (lower is better)
Translates to: PGTAQTRLHSEPRSV*SGVPWETQPHSTSP
Trigger: AGGAGAAGTGGAGTGTGGTTGAGTCTCCCAGGGAACGCCGGAGCATACAGACCTTGGTTCAGAATGAAGCCGTGTTTGTGCAGTACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 90 bp GCTGTTGGTGTCGGACACGTAGAGCGAGCCGGACACGGGGTCCACTaGCAAGTAGTACTTGTGTGCTGGGTTGTTGCTATGTTTAAACTC +
Preference number: 5 (lower is better)
Translates to: AVGVGHVERAGHGVH*QVVLVCWVVAMFKL
Trigger: GAGTTTAAACATAGCAACAACCCAGCACACAAGTACTACTTGGCAGTGGACCCCGTGTCCGGCTCGCTCTACGTGTCCGACACCAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS CCA 90 bp GCAACGCTAATGATCAGGAGAGGTGGGCTCACCATCGGCGTAAGCTaGGAGTGGGCCGCTCTTCGTTTTGTGTTTCCCTCTAACTACAGA +
Preference number: 5 (lower is better)
Translates to: ATLMIRRGGLTIGVS*EWAALRFVFPSNYR
Trigger: TCTGTAGTTAGAGGGAAACACAAAACGAAGAGCGGCCCACTCCCAGCTTACGCCGATGGTGAGCCCACCTCTCCTGATCATTAGCGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS CCA 90 bp CCAGAGAGGAGCTTGTGTAGCGACACTCTTTGCCACAGCGTCCTCTaGTCAAAGAGCGGTGTCGCCGGTCCTTTACATCCATTATTCCAG +
Preference number: 5 (lower is better)
Translates to: PERSLCSDTLCHSVL*SKSGVAGPLHPLFQ
Trigger: CTGGAATAATGGATGTAAAGGACCGGCGACACCGCTCTTTGACCAGAGGACGCTGTGGCAAAGAGTGTCGCTACACAAGCTCCTCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS-3UTR CAA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCCTCCCCGAGGAGGTCTaGAAGAGGAAGTGCCGGGTC +
Preference number: 5 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFLPEEV*KRKCRV
Trigger: GACCCGGCACTTCCTCTTCAAGACCTCCTCGGGGAG...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACTCCAGATGGCATTGTaGCCACATCATCGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSLQMAL*PHHRFL
Trigger: CAGGAAACGATGATGTGGCAACAATGCCATCTGGAG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGAGTCCATACACCCTTaGGCCATACGCATCTGTCTT +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSESIHP*AIRICL
Trigger: AAGACAGATGCGTATGGCCAAAGGGTGTATGGACTC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACAATTGACATCGTTTTaGCAGTCGCAGTCCGAGGCT +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSQLTSF*QSQSEA
Trigger: AGCCTCGGACTGCGACTGCAAAAACGATGTCAATTG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGCAGGTCGGGCGGTCATaGACGGCCACGCTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRQVGRS*TATLWS
Trigger: GCTCCAGAGCGTGGCCGTCAATGACCGCCCGACCTG...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACCATCGTCGTCAATTTaGTACTGCACATCCCCGAGT +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSPSSSI*YCTSPS
Trigger: ACTCGGGGATGTGCAGTACAAAATTGACGACGATGG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACCTTGTTGTAGGCTCTaGTTAGGAGGCCCTTGGAAT +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSPCCRL*LGGPWN
Trigger: ATTCCAAGGGCCTCCTAACAAGAGCCTACAACAAGG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATTGATCATGAGGCCGTaGATGCTGAACACAGCCAGA +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSLIMRP*MLNTAR
Trigger: TCTGGCTGTGTTCAGCATCAACGGCCTCATGATCAA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAAAGGGGGCCGGCTCCTaGCCCACGTTTTTCCACATG +
Preference number: 5 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGKGAGS*PTFFHM
Trigger: CATGTGGAAAAACGTGGGCAAGGAGCCGGCCCCCTT...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACCGCTCTCTAGCACCTaGCGGCCGATGGTGGTGCCT +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAPLSST*RPMVVP
Trigger: AGGCACCACCATCGGCCGCAAGGTGCTAGAGAGCGG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGCTTCGAGTCCTGCCGTaGACCAGCAGCGTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVLRVLP*TSSVGW
Trigger: CCAGCCCACGCTGCTGGTCAACGGCAGGACTCGAAG...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCATATCCCTCGTACCCTaGCACGCGCCCGGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFISLVP*HAPGAQ
Trigger: CTGAGCACCGGGCGCGTGCAAGGGTACGAGGGATAT...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATCGGCAAGGGTGAAGTaGGTTCCTTGTCTAGGAAAC +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSSARVK*VPCLGN
Trigger: GTTTCCTAGACAAGGAACCAACTTCACCCTTGCCGA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS TCA 90 bp CCCCTGTCACCAGGCTCACAGTGTATTGGTGGATGCCATCAGCGTTaGAAACATATAACTCCTGCTCTCCGGGGGATGCAGCCTCATACT +
Preference number: 5 (lower is better)
Translates to: PLSPGSQCIGGCHQR*KHITPALRGMQPHT
Trigger: AGTATGAGGCTGCATCCCCCGGAGAGCAGGAGTTATATGTTTTCAACGCTGATGGCATCCACCAATACACTGTGAGCCTGGTGACAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 90 bp AAACACCCCTGGTGGGACTTCTTGTGTTACCCGCCGACCAACTTCTaGTTCACCACTGTCTATGCTGCTGTTTTTCAACGACCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: KHPWWDFLCYPPTNF*FTTVYAAVFQRPGH
Trigger: GTGCCCTGGTCGTTGAAAAACAGCAGCATAGACAGTGGTGAAGCAGAAGTTGGTCGGCGGGTAACACAAGAAGTCCCACCAGGGGTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 90 bp TTGGAGTTCTCAATGTCAATGGTAATAGATTTCTCCATTTCCCGGTaGAGACTGGTTACCACCCCCGTGGGGCGCGTCACGTTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: LEFSMSMVIDFSISR*RLVTTPVGRVTLVR
Trigger: CCTGACCAACGTGACGCGCCCCACGGGGGTGGTAACCAGTCTGCACCGGGAAATGGAGAAATCTATTACCATTGACATTGAGAACTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 90 bp GATGCCTTTGCCAATGATGGGCGTGGTGGTGGCAAACCAGTGACCTaGTTTCTCTCGGATGCTGGCGTGGAGCTTTTTAGTAATGACCTG +
Preference number: 5 (lower is better)
Translates to: DAFANDGRGGGKPVT*FLSDAGVELFSNDL
Trigger: CAGGTCATTACTAAAAAGCTCCACGCCAGCATCCGAGAGAAAGCAGGTCACTGGTTTGCCACCACCACGCCCATCATTGGCAAAGGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 90 bp GCCAACAGAAGCTTGGTCACATCGGGTTGGTTCATCTGGGACAACTaGGGAAGGCCACCATCATTCTTAAACCCGGAGCTTCCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: ANRSLVTSGWFIWDN*GRPPSFLNPELPAK
Trigger: TTTGGCAGGAAGCTCCGGGTTTAAGAATGATGGTGGCCTTCCGCAGTTGTCCCAGATGAACCAACCCGATGTGACCAAGCTTCTGTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517941.1
CDS CCA 90 bp CACTCCACCCGCTGGCCTTGTTGTAGGCTCTTGTTAGGAGGCCCTTaGAATTGTATTCGAAGATGTCAGACCCTCTCTGGCACAGATAGC +
Preference number: 5 (lower is better)
Translates to: HSTRWPCCRLLLGGP*NCIRRCQTLSGTDS
Trigger: GCTATCTGTGCCAGAGAGGGTCTGACATCTTCGAATACAATTCCAAGGGCCTCCTAACAAGAGCCTACAACAAGGCCAGCGGGTGGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 90 bp AGTGGTGGTCAGAAAGATAGGTCTTCTCCTCTGCCAACAGAAGCTTaGTCACATCGGGTTGGTTCATCTGGGACAACTGCGGAAGGCCAC +
Preference number: 5 (lower is better)
Translates to: SGGQKDRSSPLPTEA*SHRVGSSGTTAEGH
Trigger: GTGGCCTTCCGCAGTTGTCCCAGATGAACCAACCCGATGTGACCAAGCTTCTGTTGGCAGAGGAGAAGACCTATCTTTCTGACCACCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517941.1
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACTGAGCAGGTATGAATaGGGGGAGAATTCCTCATCA +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSLSRYE*GENSSS
Trigger: TGATGAGGAATTCTCCCCCAATTCATACCTGCTCAG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACTCCCCGAGGAGGTCTaGAAGAGGAAGTGCCGGGTC +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMALPEEV*KRKCRV
Trigger: GACCCGGCACTTCCTCTTCAAGACCTCCTCGGGGAG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCCCTGGTGGGACTTCTaGTGTTACCCGCCGACCAAC +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADPWWDF*CYPPTN
Trigger: GTTGGTCGGCGGGTAACACAAGAAGTCCCACCAGGG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAATCTTCAGCAGTGACTaGTACCCTGCAGTTCTAGAG +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSIFSSD*YPAVLE
Trigger: CTCTAGAACTGCAGGGTACAAGTCACTGCTGAAGAT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACTCCGGCGGCGACCATaGCCCATGATGCTGGTGATG +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMALRRRP*PMMLVM
Trigger: CATCACCAGCATCATGGGCAATGGTCGCCGCCGGAG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGCTCCGGCGGCGACCATaGCCCATGATGCTGGTGATG +
Preference number: 5 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVLRRRP*PMMLVM
Trigger: CATCACCAGCATCATGGGCAATGGTCGCCGCCGGAG...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATACTTTGAGGCCTCCATaGGTGCCCACGGTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADTLRPP*VPTVRV
Trigger: CACCCTCACCGTGGGCACCAATGGAGGCCTCAAAGT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCACTTTGAGGCCTCCATaGGTGCCCACGGTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFTLRPP*VPTVRV
Trigger: CACCCTCACCGTGGGCACCAATGGAGGCCTCAAAGT...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCCTGTTTCATCGCTCTaGGTGGCCAGGAGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADPVSSL*VARSPV
Trigger: CACTGGGCTCCTGGCCACCAAGAGCGATGAAACAGG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCCCTGTTTCATCGCTCTaGGTGGCCAGGAGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFPVSSL*VARSPV
Trigger: CACTGGGCTCCTGGCCACCAAGAGCGATGAAACAGG...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATCTACTGAAGAGAGGTaGGTGATGACAGTGACGTCA +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSSTEER*VMTVTS
Trigger: TGACGTCACTGTCATCACCAACCTCTCTTCAGTAGA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTACGATGCGGCCTTGCTaGTCGATGTCTGTCCTCTCG +
Preference number: 5 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFTMRPC*SMSVLS
Trigger: CGAGAGGACAGACATCGACAAGCAAGGCCGCATCGT...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTTCATACTGGACCTCCTaGATCCGCCCATGGGTGTCG +
Preference number: 5 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFSYWTS*IRPWVS
Trigger: CGACACCCATGGGCGGATCAAGGAGGTCCAGTATGA...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATCTCTCTGTTGTCTGTaGGACACCTGTAATGAGCTG +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSSLCCL*DTCNEL
Trigger: CAGCTCATTACAGGTGTCCAACAGACAACAGAGAGA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATAGCACAGATGCCACCTaGCGGCTATCTTCGCTGGCG +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADSTDAT*RLSSLA
Trigger: CGCCAGCGAAGATAGCCGCAAGGTGGCATCTGTGCT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCAGCACAGATGCCACCTaGCGGCTATCTTCGCTGGCG +
Preference number: 5 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFSTDAT*RLSSLA
Trigger: CGCCAGCGAAGATAGCCGCAAGGTGGCATCTGTGCT...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS GCA 90 bp CTTGTGTTACCCGCCGACCAACTTCTGCTTCACCACTGTCTATGCTaGTGTTTTTCAACGACCAGGGCACTTTGCCTCCAGATGGCATTG +
Preference number: 5 (lower is better)
Translates to: LVLPADQLLLHHCLC*CFSTTRALCLQMAL
Trigger: CAATGCCATCTGGAGGCAAAGTGCCCTGGTCGTTGAAAAACAGCAGCATAGACAGTGGTGAAGCAGAAGTTGGTCGGCGGGTAACACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS GCA 90 bp CTTCTTGTGTTACCCGCCGACCAACTTCTGCTTCACCACTGTCTATaGTGCTGTTTTTCAACGACCAGGGCACTTTGCCTCCAGATGGCA +
Preference number: 5 (lower is better)
Translates to: LLVLPADQLLLHHCL*CCFSTTRALCLQMA
Trigger: TGCCATCTGGAGGCAAAGTGCCCTGGTCGTTGAAAAACAGCAGCATAGACAGTGGTGAAGCAGAAGTTGGTCGGCGGGTAACACAAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS CCA 90 bp TTCTCCTCTGCCAACAGAAGCTTGGTCACATCGGGTTGGTTCATCTaGGACAACTGCGGAAGGCCACCATCATTCTTAAACCCGGAGCTT +
Preference number: 5 (lower is better)
Translates to: FSSANRSLVTSGWFI*DNCGRPPSFLNPEL
Trigger: AAGCTCCGGGTTTAAGAATGATGGTGGCCTTCCGCAGTTGTCCCAGATGAACCAACCCGATGTGACCAAGCTTCTGTTGGCAGAGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517941.1
CDS-3UTR CAA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAATCTGCAGGCTGGAGTaGCCAATTGAGTCCGAGCAG +
Preference number: 5 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGICRLE*PIESEQ
Trigger: CTGCTCGGACTCAATTGGCAACTCCAGCCTGCAGAT...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACATCGGGACCCATCCAGTaGGGATCGCAGCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTSGPIQ*GSQLQR
Trigger: CCTCTGCAGCTGCGATCCCAACTGGATGGGTCCCGA...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGTTTCCATGGCAACGTaGCATCCGGGCCCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAVSMAT*HPGPLQ
Trigger: CTGGAGAGGGCCCGGATGCAACGTTGCCATGGAAAC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGGTTTCCATGGCAACGTaGCATCCGGGCCCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVVSMAT*HPGPLQ
Trigger: CTGGAGAGGGCCCGGATGCAACGTTGCCATGGAAAC...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGCTCCGGCGGCGACCATaGCCCATGATGCTGGTGATG +
Preference number: 5 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRLRRRP*PMMLVM
Trigger: CATCACCAGCATCATGGGCAATGGTCGCCGCCGGAG...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAAGGCAGATCTCCCCGTaGGTTGTTACCTGGCGTAGA +
Preference number: 5 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGRQISP*VVTWRR
Trigger: TCTACGCCAGGTAACAACCAACGGGGAGATCTGCCT...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTGTGTGGACACGACTTaGAGGCCTCCATTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADCVDTT*RPPLVP
Trigger: GGGCACCAATGGAGGCCTCAAAGTCGTGTCCACACA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAACGTCATCATCACGGTaGGAGTTCTCAATGTCAATG +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSTSSSR*EFSMSM
Trigger: CATTGACATTGAGAACTCCAACCGTGATGATGACGT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGTAGCTGTTCCGAACTaGATCTTGTACCACTGTGTA +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSVAVPN*ILYHCV
Trigger: TACACAGTGGTACAAGATCAAGTTCGGAACAGCTAC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATACGATGCGGCCTTGCTaGTCGATGTCTGTCCTCTCG +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADTMRPC*SMSVLS
Trigger: CGAGAGGACAGACATCGACAAGCAAGGCCGCATCGT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGGGAGAAGCCCCCACTTaGGAGGTTGACCATCTTCAA +
Preference number: 5 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWGEAPT*EVDHLQ
Trigger: TTGAAGATGGTCAACCTCCAAAGTGGGGGCTTCTCC...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCATACTGGACCTCCTaGATCCGCCCATGGGTGTCG +
Preference number: 5 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFSYWTS*IRPWVS
Trigger: CGACACCCATGGGCGGATCAAGGAGGTCCAGTATGA...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACTTAAAAACTGGATGTaGCTGCTACTGTCTGCAAGC +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSLKNWM*LLLSAS
Trigger: GCTTGCAGACAGTAGCAGCAACATCCAGTTTTTAAG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 90 bp GCAGGTATGAATTGGGGGAGAATTCCTCATCAGGGTTGGTGTCCATaGTTTGATGGGAGGTGTTGCTGTCTAGCAATGGCATCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: AGMNWGRIPHQGWCP*FDGRCCCLAMASGS
Trigger: GCTGCCAGATGCCATTGCTAGACAGCAACACCTCCCATCAAATCATGGACACCAACCCTGATGAGGAATTCTCCCCCAATTCATACCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000517586.1
ENST00000518659.5
ENST00000519204.5
ENST00000520393.5
CDS TCA 90 bp CATTCTGGTCAACCTTCCGGATCATGGTGGCATCGACAAAGTACATaGGCCCATTCTTGTCTACTGCAATACCTCTCGGGCTCATCAGGG +
Preference number: 5 (lower is better)
Translates to: HSGQPSGSWWHRQST*AHSCLLQYLSGSSG
Trigger: CCCTGATGAGCCCGAGAGGTATTGCAGTAGACAAGAATGGGCTCATGTACTTTGTCGATGCCACCATGATCCGGAAGGTTGACCAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 90 bp AACATGATGCCTTTGCCAATGATGGGCGTGGTGGTGGCAAACCAGTaGCCTGCTTTCTCTCGGATGCTGGCGTGGAGCTTTTTAGTAATG +
Preference number: 5 (lower is better)
Translates to: NMMPLPMMGVVVANQ*PAFSRMLAWSFLVM
Trigger: CATTACTAAAAAGCTCCACGCCAGCATCCGAGAGAAAGCAGGTCACTGGTTTGCCACCACCACGCCCATCATTGGCAAAGGCATCATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGGTCTCCAGTGGCACGTaGCTGTTTAGCACCCAGCTG +
Preference number: 5 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVVSSGT*LFSTQL
Trigger: CAGCTGGGTGCTAAACAGCAACGTGCCACTGGAGAC...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATTCGGTGCCTGCCGTTaGCCTACCAATGGTGCAGTG +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAFGACR*PTNGAV
Trigger: CACTGCACCATTGGTAGGCAAACGGCAGGCACCGAA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTTTCGGTGCCTGCCGTTaGCCTACCAATGGTGCAGTG +
Preference number: 5 (lower is better)
Translates to: TSTETDTHELRNLNRLHPFGACR*PTNGAV
Trigger: CACTGCACCATTGGTAGGCAAACGGCAGGCACCGAA...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGTTCGGTGCCTGCCGTTaGCCTACCAATGGTGCAGTG +
Preference number: 5 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVFGACR*PTNGAV
Trigger: CACTGCACCATTGGTAGGCAAACGGCAGGCACCGAA...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCACCGTATTTTGGGTACTaGACAAAAGACACGTTCACA +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSPYFGY*TKDTFT
Trigger: TGTGAACGTGTCTTTTGTCAAGTACCCAAAATACGG...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATAGGAAGCACCTCCATTaGCGATCAGGTCGAACGTGC +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADRKHLH*RSGRTC
Trigger: GCACGTTCGACCTGATCGCAAATGGAGGTGCTTCCT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATCGGGCTCATCAGGGTaGCATCTATGGCCTTCCCTC +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMASGSSG*HLWPSL
Trigger: GAGGGAAGGCCATAGATGCAACCCTGATGAGCCCGA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGTCGGGCTCATCAGGGTaGCATCTATGGCCTTCCCTC +
Preference number: 5 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVSGSSG*HLWPSL
Trigger: GAGGGAAGGCCATAGATGCAACCCTGATGAGCCCGA...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCAGGCTCACAGTGTATaGGTGGATGCCATCAGCGTT +
Preference number: 5 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSQAHSV*VDAISV
Trigger: AACGCTGATGGCATCCACCAATACACTGTGAGCCTG...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAACGATGCGGCCTTGCTaGTCGATGTCTGTCCTCTCG +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMATMRPC*SMSVLS
Trigger: CGAGAGGACAGACATCGACAAGCAAGGCCGCATCGT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATATGAGGCGCACACTGTaGCCTGGGTTCAGTAAGTGG +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADMRRTL*PGFSKW
Trigger: CCACTTACTGAACCCAGGCAACAGTGTGCGCCTCAT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTGGCACGAAATACATTTaGGCTCTCGGGAAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFGTKYI*ALGKPG
Trigger: TCCTGGCTTCCCGAGAGCCAAAATGTATTTCGTGCC...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAGTCACCCGCCCTTCTTaGATGGCAAACATGATGCCT +
Preference number: 5 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGVTRPS*MANMMP
Trigger: AGGCATCATGTTTGCCATCAAAGAAGGGCGGGTGAC...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTGTCACCCGCCCTTCTTaGATGGCAAACATGATGCCT +
Preference number: 5 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFVTRPS*MANMMP
Trigger: AGGCATCATGTTTGCCATCAAAGAAGGGCGGGTGAC...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCCGCTCTCTAGCACCTaGCGGCCGATGGTGGTGCCT +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFPLSST*RPMVVP
Trigger: AGGCACCACCATCGGCCGCAAGGTGCTAGAGAGCGG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 90 bp GCTGTTCCGAACTTGATCTTGTACCACTGTGTAGGAGGCCTCTACTaGAGAGAGGTTGGTGATGACAGTGACGTCATCATCACGGTTGGA +
Preference number: 5 (lower is better)
Translates to: AVPNLILYHCVGGLY*REVGDDSDVIITVG
Trigger: TCCAACCGTGATGATGACGTCACTGTCATCACCAACCTCTCTTCAGTAGAGGCCTCCTACACAGTGGTACAAGATCAAGTTCGGAACAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 90 bp ACAGGAAGAAAATCAGAGACTTCAGGAGTTTGCAGGGACAGAGGGTaGCTACCTGCTGTTGAAAGGGTTCTCTCCAGGAATGATGTGGGT +
Preference number: 5 (lower is better)
Translates to: TGRKSETSGVCRDRG*LPAVERVLSRNDVG
Trigger: ACCCACATCATTCCTGGAGAGAACCCTTTCAACAGCAGGTAGGCACCCTCTGTCCCTGCAAACTCCTGAAGTCTCTGATTTTCTTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521126.1
CDS GCA 90 bp CAACAGGTGTCTCCAGCAGGTTCTGGGTTAAAGATGTTGACATCCTaGAAAGACACTAGGGCTCTGTTCTGGAGCCCAACACAAAGTGAG +
Preference number: 5 (lower is better)
Translates to: QQVSPAGSGLKMLTS*KDTRALFWSPTQSE
Trigger: CTCACTTTGTGTTGGGCTCCAGAACAGAGCCCTAGTGTCTTTGCAGGATGTCAACATCTTTAACCCAGAACCTGCTGGAGACACCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521126.1
CDS-3UTR CAA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCGGCTGGAGTTGCCAATaGAGTCCGAGCAGATGCATT +
Preference number: 5 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFGWSCQ*SPSRCI
Trigger: AATGCATCTGCTCGGACTCAATTGGCAACTCCAGCC...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACCGGTCCTTATCCCATaGTTAAAGGTGTGCCCATCT +
Preference number: 5 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGPVLIP*LKVCPS
Trigger: AGATGGGCACACCTTTAACAATGGGATAAGGACCGG...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGATTCCCGAGGGAGATGTaGAACTTTAAGAACTGGGGC +
Preference number: 5 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGFPREM*NFKNWG
Trigger: GCCCCAGTTCTTAAAGTTCAACATCTCCCTCGGGAA...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCATCTAGGACAACAGTATaGAAGGAAACCATCTCTTTG +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSSRTTV*KETISL
Trigger: CAAAGAGATGGTTTCCTTCAATACTGTTGTCCTAGA...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGATCTCGGCATTCACATTaGCCATCTTTACAGGTCCCG +
Preference number: 5 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGSRHSH*PSLQVP
Trigger: CGGGACCTGTAAAGATGGCAAATGTGAATGCCGAGA...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGTCTCGGCATTCACATTaGCCATCTTTACAGGTCCCG +
Preference number: 5 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSSRHSH*PSLQVP
Trigger: CGGGACCTGTAAAGATGGCAAATGTGAATGCCGAGA...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATTGAGGATGTGGTGTTaGTCTAGGGACCAGCCACCG +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMALRMWC*SRDQPP
Trigger: CGGTGGCTGGTCCCTAGACAAACACCACATCCTCAA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CGAAAATGTCAGAAGTATTTGTCCTACAAGCAGTCTGAGTGGTTTGTCCCGCAGTTGAGGATGTGGTGTTaGTCTAGGGACCAGCCACCG +
Preference number: 5 (lower is better)
Translates to: RKCQKYLSYKQSEWFVPQLRMWC*SRDQPP
Trigger: CGGTGGCTGGTCCCTAGACAAACACCACATCCTCAA...CTGCGGGACAAACCACTCAGACTGCTTGTAGGACAAATACTTCTGACATTTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGTCGGGCTCATCAGGGTaGCATCTATGGCCTTCCCTC +
Preference number: 5 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRSGSSG*HLWPSL
Trigger: GAGGGAAGGCCATAGATGCAACCCTGATGAGCCCGA...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAAGATCTCCCCGTTGGTaGTTACCTGGCGTAGACGGT +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMARSPRW*LPGVDG
Trigger: ACCGTCTACGCCAGGTAACAACCAACGGGGAGATCT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTAGATCTCCCCGTTGGTaGTTACCTGGCGTAGACGGT +
Preference number: 5 (lower is better)
Translates to: TSTETDTHELRNLNRLHPRSPRW*LPGVDG
Trigger: ACCGTCTACGCCAGGTAACAACCAACGGGGAGATCT...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAAGGCAGATCTCCCCGTaGGTTGTTACCTGGCGTAGA +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMARQISP*VVTWRR
Trigger: TCTACGCCAGGTAACAACCAACGGGGAGATCTGCCT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGAGGCAGATCTCCCCGTaGGTTGTTACCTGGCGTAGA +
Preference number: 5 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVRQISP*VVTWRR
Trigger: TCTACGCCAGGTAACAACCAACGGGGAGATCTGCCT...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGCATTAAGAACAGGCTaGTTCTTGCTGACCGCCCTG +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADALRTG*FLLTAL
Trigger: CAGGGCGGTCAGCAAGAACAAGCCTGTTCTTAATGC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCGCATTAAGAACAGGCTaGTTCTTGCTGACCGCCCTG +
Preference number: 5 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFALRTG*FLLTAL
Trigger: CAGGGCGGTCAGCAAGAACAAGCCTGTTCTTAATGC...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCAGGCTCACAGTGTATaGGTGGATGCCATCAGCGTT +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADQAHSV*VDAISV
Trigger: AACGCTGATGGCATCCACCAATACACTGTGAGCCTG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAGTACTATATGTGAAATaGTACAAGTACTCCCCTGTC +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSVLYVK*YKYSPV
Trigger: GACAGGGGAGTACTTGTACAATTTCACATATAGTAC...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGTGTGTGGACACGACTTaGAGGCCTCCATTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRCVDTT*RPPLVP
Trigger: GGGCACCAATGGAGGCCTCAAAGTCGTGTCCACACA...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAGTTCCGAACTTGATCTaGTACCACTGTGTAGGAGGC +
Preference number: 5 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGVPNLI*YHCVGG
Trigger: GCCTCCTACACAGTGGTACAAGATCAAGTTCGGAAC...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAAAGAAGTATGACACGTaGACAGCTGCCAGCCCGCTG +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAKKYDT*TAASPL
Trigger: CAGCGGGCTGGCAGCTGTCAACGTGTCATACTTCTT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGCCAGCCAGGCGCCCATaGAAGAAGTATGACACGTTG +
Preference number: 5 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVPARRP*KKYDTL
Trigger: CAACGTGTCATACTTCTTCAATGGGCGCCTGGCTGG...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGACACGATGCGGCCTaGCTTGTCGATGTCTGTCCT +
Preference number: 5 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRGHDAA*LVDVCP
Trigger: AGGACAGACATCGACAAGCAAGGCCGCATCGTGTCC...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAACAATCTCTGATAACTaGGAGAGTTTCCCATACTTG +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSTISDN*ESFPYL
Trigger: CAAGTATGGGAAACTCTCCAAGTTATCAGAGATTGT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGGAGAAGCCCCCACTTaGGAGGTTGACCATCTTCAA +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADGEAPT*EVDHLQ
Trigger: TTGAAGATGGTCAACCTCCAAAGTGGGGGCTTCTCC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTTGGGTGTCGAAGTGTTaGCTGAGGGTCATCACGGCA +
Preference number: 5 (lower is better)
Translates to: TSTETDTHELRNLNRLHPWVSKC*LRVITA
Trigger: TGCCGTGATGACCCTCAGCAAACACTTCGACACCCA...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGTGGGTGTCGAAGTGTTaGCTGAGGGTCATCACGGCA +
Preference number: 5 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVWVSKC*LRVITA
Trigger: TGCCGTGATGACCCTCAGCAAACACTTCGACACCCA...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATAGTTTTAGCTCCCTCTaGATCACCCTGCCCATGCTG +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADSFSSL*ITLPML
Trigger: CAGCATGGGCAGGGTGATCAAGAGGGAGCTAAAACT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAATGAGGCGCACACTGTaGCCTGGGTTCAGTAAGTGG +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAMRRTL*PGFSKW
Trigger: CCACTTACTGAACCCAGGCAACAGTGTGCGCCTCAT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGGTGTACTGCAGCTGTTaGATCATGAGGCCGTTGATG +
Preference number: 5 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSVYCSC*IMRPLM
Trigger: CATCAACGGCCTCATGATCAAACAGCTGCAGTACAC...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGCAAACATGATGCCTTaGCCAATGATGGGCGTGGTG +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADANMMP*PMMGVV
Trigger: CACCACGCCCATCATTGGCAAAGGCATCATGTTTGC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 90 bp AGAGCAAAACACACAGTGGTGGTCAGAAAGATAGGTCTTCTCCTCTaGCAACAGAAGCTTGGTCACATCGGGTTGGTTCATCTGGGACAA +
Preference number: 5 (lower is better)
Translates to: RAKHTVVVRKIGLLL*QQKLGHIGLVHLGQ
Trigger: TTGTCCCAGATGAACCAACCCGATGTGACCAAGCTTCTGTTGGCAGAGGAGAAGACCTATCTTTCTGACCACCACTGTGTGTTTTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517941.1
CDS GCA 90 bp GGAGAGTTTCAAACCAAAGTCTCTAAGCTGACAATTGCTGAAAGCTaGAAGCTAGAGCGACAGATAAGACTGCGGCAGGCATCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: GEFQTKVSKLTIAES*KLERQIRLRQASQS
Trigger: ACTCTGGGATGCCTGCCGCAGTCTTATCTGTCGCTCTAGCTTGCAGCTTTCAGCAATTGTCAGCTTAGAGACTTTGGTTTGAAACTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522488.1
CDS CCA 90 bp AAATTGTACAAGTACTCCCCTGTCACCAGGCTCACAGTGTATTGGTaGATGCCATCAGCGTTGAAAACATATAACTCCTGCTCTCCGGGG +
Preference number: 5 (lower is better)
Translates to: KLYKYSPVTRLTVYW*MPSALKTYNSCSPG
Trigger: CCCCGGAGAGCAGGAGTTATATGTTTTCAACGCTGATGGCATCCACCAATACACTGTGAGCCTGGTGACAGGGGAGTACTTGTACAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGGGCCGCTCTTCGTTTaGTGTTTCCCTCTAACTACA +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADGPLFV*CFPLTT
Trigger: TGTAGTTAGAGGGAAACACAAAACGAAGAGCGGCCC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTGCCTCCAGATGGCATaGTTGCCACATCATCGTTTC +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADCLQMA*LPHHRF
Trigger: GAAACGATGATGTGGCAACAATGCCATCTGGAGGCA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR CAA 90 bp CGAAAATGTCAGAAGTATTTGTCCTACAAGCAGTCTGAGTGGTTTGTCCCGCAGAACGACCAGGGCACTTaGCCTCCAGATGGCATTGTT +
Preference number: 5 (lower is better)
Translates to: RKCQKYLSYKQSEWFVPQNDQGT*PPDGIV
Trigger: AACAATGCCATCTGGAGGCAAAGTGCCCTGGTCGTT...CTGCGGGACAAACCACTCAGACTGCTTGTAGGACAAATACTTCTGACATTTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCCCTGGTGGGACTTCTaGTGTTACCCGCCGACCAAC +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFPWWDF*CYPPTN
Trigger: GTTGGTCGGCGGGTAACACAAGAAGTCCCACCAGGG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTTCCCGAGGGAGATGTaGAACTTTAAGAACTGGGGC +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADFPREM*NFKNWG
Trigger: GCCCCAGTTCTTAAAGTTCAACATCTCCCTCGGGAA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATATGTGGGTGCTATCCTaGCCTGCCAAGAGCTTGATA +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADMWVLS*PAKSLI
Trigger: TATCAAGCTCTTGGCAGGCAAGGATAGCACCCACAT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCATGTGGGTGCTATCCTaGCCTGCCAAGAGCTTGATA +
Preference number: 5 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFMWVLS*PAKSLI
Trigger: TATCAAGCTCTTGGCAGGCAAGGATAGCACCCACAT...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGAGTCCATACACCCTTaGGCCATACGCATCTGTCTT +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADESIHP*AIRICL
Trigger: AAGACAGATGCGTATGGCCAAAGGGTGTATGGACTC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAATTCCACTTTTAACATaGAGGATGTGGTGTTTGTCT +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSIPLLT*RMWCLS
Trigger: AGACAAACACCACATCCTCAATGTTAAAAGTGGAAT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGCGCAATGATGCTGACTaGGTGGTTCTCGGTGATTCG +
Preference number: 5 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVRNDAD*VVLGDS
Trigger: CGAATCACCGAGAACCACCAAGTCAGCATCATTGCG...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAGAACAGGCTTGTTCTaGCTGACCGCCCTGATCCGA +
Preference number: 5 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTRTGLF*LTALIR
Trigger: TCGGATCAGGGCGGTCAGCAAGAACAAGCCTGTTCT...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGGCATTAAGAACAGGCTaGTTCTTGCTGACCGCCCTG +
Preference number: 5 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVALRTG*FLLTAL
Trigger: CAGGGCGGTCAGCAAGAACAAGCCTGTTCTTAATGC...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCGCAGCCTCATACTGGTaGAAGGCATTAAGAACAGGC +
Preference number: 5 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFAASYW*KALRTG
Trigger: GCCTGTTCTTAATGCCTTCAACCAGTATGAGGCTGC...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGCAGCCTCATACTGGTaGAAGGCATTAAGAACAGGC +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADAASYW*KALRTG
Trigger: GCCTGTTCTTAATGCCTTCAACCAGTATGAGGCTGC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAAGGGAATTCCCATTATaGTCAATCAATTCAGTGACA +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSREFPL*SINSVT
Trigger: TGTCACTGAATTGATTGACAATAATGGGAATTCCCT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTACTTTGAGGCCTCCATaGGTGCCCACGGTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFTLRPP*VPTVRV
Trigger: CACCCTCACCGTGGGCACCAATGGAGGCCTCAAAGT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCCTGTTTCATCGCTCTaGGTGGCCAGGAGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFPVSSL*VARSPV
Trigger: CACTGGGCTCCTGGCCACCAAGAGCGATGAAACAGG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGCCCCCACTTTGGAGGTaGACCATCTTCAAGACACCA +
Preference number: 5 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVPPLWR*TIFKTP
Trigger: TGGTGTCTTGAAGATGGTCAACCTCCAAAGTGGGGG...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGGAGAAGCCCCCACTTaGGAGGTTGACCATCTTCAA +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAGEAPT*EVDHLQ
Trigger: TTGAAGATGGTCAACCTCCAAAGTGGGGGCTTCTCC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTTCACTTATGACGGGCTaGATGCTTGCGATGCGGAAG +
Preference number: 5 (lower is better)
Translates to: TSTETDTHELRNLNRLHPSLMTG*MLAMRK
Trigger: CTTCCGCATCGCAAGCATCAAGCCCGTCATAAGTGA...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATCACTTATGACGGGCTaGATGCTTGCGATGCGGAAG +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMASLMTG*MLAMRK
Trigger: CTTCCGCATCGCAAGCATCAAGCCCGTCATAAGTGA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAAGTTTTAGCTCCCTCTaGATCACCCTGCCCATGCTG +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMASFSSL*ITLPML
Trigger: CAGCATGGGCAGGGTGATCAAGAGGGAGCTAAAACT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp AGTGAGGTAATTGGATATGAGGCCTTCTTTCTTATCTTCGCTTCTTTGTTTATTCAGGTCGGGCGGTCATaGACGGCCACGCTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: SEVIGYEAFFLIFASLFIQVGRS*TATLWS
Trigger: GCTCCAGAGCGTGGCCGTCAATGACCGCCCGACCTG...AATAAACAAAGAAGCGAAGATAAGAAAGAAGGCCTCATATCCAATTACCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp GTTTTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCCCTTGTTGTAGGCTCTaGTTAGGAGGCCCTTGGAAT +
Preference number: 5 (lower is better)
Translates to: VFLGIFSRALVYFRMRDFPCCRL*LGGPWN
Trigger: ATTCCAAGGGCCTCCTAACAAGAGCCTACAACAAGG...GAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTTGATCATGAGGCCGTaGATGCTGAACACAGCCAGA +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADLIMRP*MLNTAR
Trigger: TCTGGCTGTGTTCAGCATCAACGGCCTCATGATCAA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTGCCACTTGGTCTCCTAAAGCAGCCCAGCCGCAGTGCCCCTGTTAGGTCTTCAAGAGGATTGTTGCTCTaGAACATATACAGGTTAAAG +
Preference number: 5 (lower is better)
Translates to: LPLGLLKQPSRSAPVRSSRGLLL*NIYRLK
Trigger: CTTTAACCTGTATATGTTCAAGAGCAACAATCCTCT...TGAAGACCTAACAGGGGCACTGCGGCTGGGCTGCTTTAGGAGACCAAGTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGGCACGAAATACATTTaGGCTCTCGGGAAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAGTKYI*ALGKPG
Trigger: TCCTGGCTTCCCGAGAGCCAAAATGTATTTCGTGCC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTGGCACGAAATACATTTaGGCTCTCGGGAAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: TSTETDTHELRNLNRLHPGTKYI*ALGKPG
Trigger: TCCTGGCTTCCCGAGAGCCAAAATGTATTTCGTGCC...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTGCAAACATGATGCCTTaGCCAATGATGGGCGTGGTG +
Preference number: 5 (lower is better)
Translates to: TSTETDTHELRNLNRLHPANMMP*PMMGVV
Trigger: CACCACGCCCATCATTGGCAAAGGCATCATGTTTGC...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGTCACCCGCCCTTCTTaGATGGCAAACATGATGCCT +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAVTRPS*MANMMP
Trigger: AGGCATCATGTTTGCCATCAAAGAAGGGCGGGTGAC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTAGCACAGATGCCACCTaGCGGCTATCTTCGCTGGCG +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFSTDAT*RLSSLA
Trigger: CGCCAGCGAAGATAGCCGCAAGGTGGCATCTGTGCT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACATGCAAGCTCTGGGTATaGCTCCACGGGAAGCACGTA +
Preference number: 5 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTCKLWV*LHGKHV
Trigger: TACGTGCTTCCCGTGGAGCAATACCCAGAGCTTGCA...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTTACTTGTGTGCTGGGTaGTTGCGTAACTCCAAGATG +
Preference number: 5 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFYLCAG*LRNSKM
Trigger: CATCTTGGAGTTACGCAACAACCCAGCACACAAGTA...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520394.5
CDS TCA 90 bp TATGAATTGGGGGAGAATTCCTCATCAGGGTTGGTGTCCATGATTTaGTGGGAGGTGTTGCTGTCTAGCAATGGCATCTGGCAGCTAACT +
Preference number: 5 (lower is better)
Translates to: YELGENSSSGLVSMI*WEVLLSSNGIWQLT
Trigger: AGTTAGCTGCCAGATGCCATTGCTAGACAGCAACACCTCCCATCAAATCATGGACACCAACCCTGATGAGGAATTCTCCCCCAATTCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000517586.1
ENST00000518659.5
ENST00000519204.5
ENST00000520393.5
CDS GCA 90 bp ACAGTGTATTGGTGGATGCCATCAGCGTTGAAAACATATAACTCCTaGTCTCCGGGGGATGCAGCCTCATACTGGTTGAAGGCATTAAGA +
Preference number: 5 (lower is better)
Translates to: TVYWWMPSALKTYNS*SPGDAASYWLKALR
Trigger: TCTTAATGCCTTCAACCAGTATGAGGCTGCATCCCCCGGAGAGCAGGAGTTATATGTTTTCAACGCTGATGGCATCCACCAATACACTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 90 bp GTGAAATTGTACAAGTACTCCCCTGTCACCAGGCTCACAGTGTATTaGTGGATGCCATCAGCGTTGAAAACATATAACTCCTGCTCTCCG +
Preference number: 5 (lower is better)
Translates to: VKLYKYSPVTRLTVY*WMPSALKTYNSCSP
Trigger: CGGAGAGCAGGAGTTATATGTTTTCAACGCTGATGGCATCCACCAATACACTGTGAGCCTGGTGACAGGGGAGTACTTGTACAATTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGTTGGTGTCCATGATTaGATGGGAGGTGTTGCTGTC +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAVGVHD*MGGVAV
Trigger: GACAGCAACACCTCCCATCAAATCATGGACACCAAC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACCGGTCCTTATCCCATaGTTAAAGGTGTGCCCATCT +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAPVLIP*LKVCPS
Trigger: AGATGGGCACACCTTTAACAATGGGATAAGGACCGG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCATCTCCCGTTACCGTaGCACAAGTCAGGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFHLPLP*HKSGQP
Trigger: TGGCTGCCCTGACTTGTGCAACGGTAACGGGAGATG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTATGTGGGTGCTATCCTaGCCTGCCAAGAGCTTGATA +
Preference number: 5 (lower is better)
Translates to: TSTETDTHELRNLNRLHPMWVLS*PAKSLI
Trigger: TATCAAGCTCTTGGCAGGCAAGGATAGCACCCACAT...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGGAGTCCATACACCCTTaGGCCATACGCATCTGTCTT +
Preference number: 5 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVESIHP*AIRICL
Trigger: AAGACAGATGCGTATGGCCAAAGGGTGTATGGACTC...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGCGCAATGATGCTGACTaGGTGGTTCTCGGTGATTCG +
Preference number: 5 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRRNDAD*VVLGDS
Trigger: CGAATCACCGAGAACCACCAAGTCAGCATCATTGCG...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGCCTCATACTGGTaGAAGGCATTAAGAACAGGC +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAAASYW*KALRTG
Trigger: GCCTGTTCTTAATGCCTTCAACCAGTATGAGGCTGC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTTGGATGCCATCAGCGTaGAAAACATATAACTCCTGC +
Preference number: 5 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFWMPSA*KTYNSC
Trigger: GCAGGAGTTATATGTTTTCAACGCTGATGGCATCCA...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGACGTCATCATCACGGTaGGAGTTCTCAATGTCAATG +
Preference number: 5 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSTSSSR*EFSMSM
Trigger: CATTGACATTGAGAACTCCAACCGTGATGATGACGT...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGTTCCGAACTTGATCTaGTACCACTGTGTAGGAGGC +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAVPNLI*YHCVGG
Trigger: GCCTCCTACACAGTGGTACAAGATCAAGTTCGGAAC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ACTACGGAATCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGAAGAAGTATGACACGTaGACAGCTGCCAGCCCGCTG +
Preference number: 5 (lower is better)
Translates to: TTESKQTTPCNCVLLSTMKKYDT*TAASPL
Trigger: CAGCGGGCTGGCAGCTGTCAACGTGTCATACTTCTT...CATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGATTCCGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp ACTACGGAATCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGCCAGCCAGGCGCCCATaGAAGAAGTATGACACGTTG +
Preference number: 5 (lower is better)
Translates to: TTESKQTTPCNCVLLSTMPARRP*KKYDTL
Trigger: CAACGTGTCATACTTCTTCAATGGGCGCCTGGCTGG...CATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGATTCCGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGGACACGATGCGGCCTaGCTTGTCGATGTCTGTCCT +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFGHDAA*LVDVCP
Trigger: AGGACAGACATCGACAAGCAAGGCCGCATCGTGTCC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGAAATATATACTGACGTaGGCTCTGAAGCAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSKYILT*ALKQED
Trigger: GTCCTCCTGCTTCAGAGCCAACGTCAGTATATATTT...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAGCTGTCCATTCTCACTaGCTTGACTCTCTGACAATT +
Preference number: 5 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGAVHSH*LDSLTI
Trigger: AATTGTCAGAGAGTCAAGCAAGTGAGAATGGACAGC...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTCTCTCTGTTGTCTGTaGGACACCTGTAATGAGCTG +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADSLCCL*DTCNEL
Trigger: CAGCTCATTACAGGTGTCCAACAGACAACAGAGAGA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTGGGGAACTTGGAACATaGTGTGTGTCTGTTCATTCA +
Preference number: 5 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFGELGT*CVSVHS
Trigger: TGAATGAACAGACACACACAATGTTCCAAGTTCCCC...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS TCA 90 bp AAAAGGAGGTCTTCAGGATGCGGCCGTCATCACTGTAGTCAAAGATaGCCGAAGCATTGCTTTCAGGCGGGTTGTAAATATTACGGATGT +
Preference number: 5 (lower is better)
Translates to: KRRSSGCGRHHCSQR*PKHCFQAGCKYYGC
Trigger: ACATCCGTAATATTTACAACCCGCCTGAAAGCAATGCTTCGGTCATCTTTGACTACAGTGATGACGGCCGCATCCTGAAGACCTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 90 bp TTGGACACCTGTAATGAGCTGTCCATTCTCACTTGCTTGACTCTCTaGCAATTCATAGGGAGGAGGCACGAAATACATTTTGGCTCTCGG +
Preference number: 5 (lower is better)
Translates to: LDTCNELSILTCLTL*QFIGRRHEIHFGSR
Trigger: CCGAGAGCCAAAATGTATTTCGTGCCTCCTCCCTATGAATTGTCAGAGAGTCAAGCAAGTGAGAATGGACAGCTCATTACAGGTGTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 90 bp TGGAGCTTTTTAGTAATGACCTGTCCTTCCAGAGCCATGAAGGCCTaGTTATGTCTCTCTGTTGTCTGTTGGACACCTGTAATGAGCTGT +
Preference number: 5 (lower is better)
Translates to: WSFLVMTCPSRAMKA*LCLSVVCWTPVMSC
Trigger: ACAGCTCATTACAGGTGTCCAACAGACAACAGAGAGACATAACCAGGCCTTCATGGCTCTGGAAGGACAGGTCATTACTAAAAAGCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CCTTCTTTCTTATCTTCGCTTCTTTGTTTATTGGTCCGTGTGTTTGTTTTGTTTCTCCCCGAGGAGGTCTaGAAGAGGAAGTGCCGGGTC +
Preference number: 5 (lower is better)
Translates to: PSFLSSLLCLLVRVFVLFLPEEV*KRKCRV
Trigger: GACCCGGCACTTCCTCTTCAAGACCTCCTCGGGGAG...AAACAAAACAAACACACGGACCAATAAACAAAGAAGCGAAGATAAGAAAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTATCTGCAGGCTGGAGTaGCCAATTGAGTCCGAGCAG +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFICRLE*PIESEQ
Trigger: CTGCTCGGACTCAATTGGCAACTCCAGCCTGCAGAT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATATCTGTAGTTACTACTaGGCCTCGGATGAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADICSYY*ASDERN
Trigger: GTTTCTCTCATCCGAGGCCAAGTAGTAACTACAGAT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCCGTATTTTGGGTACTaGACAAAAGACACGTTCACA +
Preference number: 5 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSPYFGY*TKDTFT
Trigger: TGTGAACGTGTCTTTTGTCAAGTACCCAAAATACGG...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTAGGAAGCACCTCCATTaGCGATCAGGTCGAACGTGC +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFRKHLH*RSGRTC
Trigger: GCACGTTCGACCTGATCGCAAATGGAGGTGCTTCCT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CGAAAATGTCAGAAGTATTTGTCCTACAAGCAGTCTGAGTGGTTTGTCCCGCAGATCTTCAGCAGTGACTaGTACCCTGCAGTTCTAGAG +
Preference number: 5 (lower is better)
Translates to: RKCQKYLSYKQSEWFVPQIFSSD*YPAVLE
Trigger: CTCTAGAACTGCAGGGTACAAGTCACTGCTGAAGAT...CTGCGGGACAAACCACTCAGACTGCTTGTAGGACAAATACTTCTGACATTTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAATCTTCAGCAGTGACTaGTACCCTGCAGTTCTAGAG +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAIFSSD*YPAVLE
Trigger: CTCTAGAACTGCAGGGTACAAGTCACTGCTGAAGAT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTACATGAGCCCATTCTaGTCTACTGCAATACCTCTC +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADYMSPF*STAIPL
Trigger: GAGAGGTATTGCAGTAGACAAGAATGGGCTCATGTA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTAGATCTCCCCGTTGGTaGTTACCTGGCGTAGACGGT +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFRSPRW*LPGVDG
Trigger: ACCGTCTACGCCAGGTAACAACCAACGGGGAGATCT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGCAATTGACATCGTTTTaGCAGTCGCAGTCCGAGGCT +
Preference number: 5 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRQLTSF*QSQSEA
Trigger: AGCCTCGGACTGCGACTGCAAAAACGATGTCAATTG...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTAGAACAGGCTTGTTCTaGCTGACCGCCCTGATCCGA +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFRTGLF*LTALIR
Trigger: TCGGATCAGGGCGGTCAGCAAGAACAAGCCTGTTCT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTGGATGCCATCAGCGTaGAAAACATATAACTCCTGC +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADWMPSA*KTYNSC
Trigger: GCAGGAGTTATATGTTTTCAACGCTGATGGCATCCA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATCTACTGAAGAGAGGTaGGTGATGACAGTGACGTCA +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMASTEER*VMTVTS
Trigger: TGACGTCACTGTCATCACCAACCTCTCTTCAGTAGA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTAAGAAGTATGACACGTaGACAGCTGCCAGCCCGCTG +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFKKYDT*TAASPL
Trigger: CAGCGGGCTGGCAGCTGTCAACGTGTCATACTTCTT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCCAGCCAGGCGCCCATaGAAGAAGTATGACACGTTG +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFPARRP*KKYDTL
Trigger: CAACGTGTCATACTTCTTCAATGGGCGCCTGGCTGG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTGGGTGTCGAAGTGTTaGCTGAGGGTCATCACGGCA +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFWVSKC*LRVITA
Trigger: TGCCGTGATGACCCTCAGCAAACACTTCGACACCCA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAAGGAGGCCCTTGGAATaGTATTCGAAGATGTCAGAC +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMARRPLE*YSKMSD
Trigger: GTCTGACATCTTCGAATACAATTCCAAGGGCCTCCT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAGTGTACTGCAGCTGTTaGATCATGAGGCCGTTGATG +
Preference number: 5 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTVYCSC*IMRPLM
Trigger: CATCAACGGCCTCATGATCAAACAGCTGCAGTACAC...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATGCTGTCCATTCTCACTaGCTTGACTCTCTGACAATT +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADAVHSH*LDSLTI
Trigger: AATTGTCAGAGAGTCAAGCAAGTGAGAATGGACAGC...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CCTTCTTTCTTATCTTCGCTTCTTTGTTTATTGGTCCGTGTGTTTGTTTTGTTTATATCCCTCGTACCCTaGCACGCGCCCGGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: PSFLSSLLCLLVRVFVLFISLVP*HAPGAQ
Trigger: CTGAGCACCGGGCGCGTGCAAGGGTACGAGGGATAT...AAACAAAACAAACACACGGACCAATAAACAAAGAAGCGAAGATAAGAAAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTGCAAGCTCTGGGTATaGCTCCACGGGAAGCACGTA +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFCKLWV*LHGKHV
Trigger: TACGTGCTTCCCGTGGAGCAATACCCAGAGCTTGCA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATCTTAAAAACTGGATGTaGCTGCTACTGTCTGCAAGC +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADLKNWM*LLLSAS
Trigger: GCTTGCAGACAGTAGCAGCAACATCCAGTTTTTAAG...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGTGCCATAAATTATCTTaGCCTGTCCCTAGTCTTTGC +
Preference number: 5 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSCHKLS*PVPSLC
Trigger: GCAAAGACTAGGGACAGGCAAAGATAATTTATGGCA...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGGCTGGAGTTGCCAATaGAGTCCGAGCAGATGCATT +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFGWSCQ*SPSRCI
Trigger: AATGCATCTGCTCGGACTCAATTGGCAACTCCAGCC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR CAA 90 bp ACTACGGAATCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGTGCCTCCAGATGGCATaGTTGCCACATCATCGTTTC +
Preference number: 5 (lower is better)
Translates to: TTESKQTTPCNCVLLSTMCLQMA*LPHHRF
Trigger: GAAACGATGATGTGGCAACAATGCCATCTGGAGGCA...CATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGATTCCGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTCTCCCTCATTATCCTaGTTATCAGCACAGGAAGTT +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADSPSLS*LSAQEV
Trigger: AACTTCCTGTGCTGATAACAAGGATAATGAGGGAGA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATACATGAGCCCATTCTaGTCTACTGCAATACCTCTC +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAYMSPF*STAIPL
Trigger: GAGAGGTATTGCAGTAGACAAGAATGGGCTCATGTA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGATTCGAAGGATGACATaGTTCTCTAGAACATACAAG +
Preference number: 5 (lower is better)
Translates to: RNFQPGFSLLQDEGLLAWIRRMT*FSRTYK
Trigger: CTTGTATGTTCTAGAGAACAATGTCATCCTTCGAAT...CCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTGTACTATATGTGAAATaGTACAAGTACTCCCCTGTC +
Preference number: 5 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFVLYVK*YKYSPV
Trigger: GACAGGGGAGTACTTGTACAATTTCACATATAGTAC...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACATCTACTGAAGAGAGGTaGGTGATGACAGTGACGTCA +
Preference number: 5 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTSTEER*VMTVTS
Trigger: TGACGTCACTGTCATCACCAACCTCTCTTCAGTAGA...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAAAATATATACTGACGTaGGCTCTGAAGCAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAKYILT*ALKQED
Trigger: GTCCTCCTGCTTCAGAGCCAACGTCAGTATATATTT...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGAAATATATACTGACGTaGGCTCTGAAGCAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVKYILT*ALKQED
Trigger: GTCCTCCTGCTTCAGAGCCAACGTCAGTATATATTT...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTACAATCTCTGATAACTaGGAGAGTTTCCCATACTTG +
Preference number: 5 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFTISDN*ESFPYL
Trigger: CAAGTATGGGAAACTCTCCAAGTTATCAGAGATTGT...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCCCCCACTTTGGAGGTaGACCATCTTCAAGACACCA +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFPPLWR*TIFKTP
Trigger: TGGTGTCTTGAAGATGGTCAACCTCCAAAGTGGGGG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGAGGAGGCCCTTGGAATaGTATTCGAAGATGTCAGAC +
Preference number: 5 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRRRPLE*YSKMSD
Trigger: GTCTGACATCTTCGAATACAATTCCAAGGGCCTCCT...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCACTTGTTAGGAGGCCCTaGGAATTGTATTCGAAGATG +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMALVRRP*ELYSKM
Trigger: CATCTTCGAATACAATTCCAAGGGCCTCCTAACAAG...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ACTACGGAATCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGCCTTGTTGTAGGCTCTaGTTAGGAGGCCCTTGGAAT +
Preference number: 5 (lower is better)
Translates to: TTESKQTTPCNCVLLSTMPCCRL*LGGPWN
Trigger: ATTCCAAGGGCCTCCTAACAAGAGCCTACAACAAGG...CATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGATTCCGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp ACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAGAGTATGAAATTTAAGGGGGCCGGCTCCTaGCCCACGTTTTTCCACATG +
Preference number: 5 (lower is better)
Translates to: TAYYCPQWNLQRQKSMKFKGAGS*PTFFHM
Trigger: CATGTGGAAAAACGTGGGCAAGGAGCCGGCCCCCTT...AAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp CCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGACAGTAGCATTTGTTCTTTTGTTCCTTTaGGACACTTTGCGTCTCTTT +
Preference number: 5 (lower is better)
Translates to: PGFSLLQDEGLLAWTVAFVLLFL*DTLRLF
Trigger: AAAGAGACGCAAAGTGTCCAAAAGGAACAAAAGAAC...AAATGCTACTGTCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAGTTCTTTTGTTCCTTTaGGACACTTTGCGTCTCTTT +
Preference number: 5 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGVLLFL*DTLRLF
Trigger: AAAGAGACGCAAAGTGTCCAAAAGGAACAAAAGAAC...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTCTGATTTGTTTTCGTaGTCAGAGTCAGTCAGGGTA +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADSDLFS*SESVRV
Trigger: TACCCTGACTGACTCTGACAACGAAAACAAATCAGA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCTCCAGATGGCATTGTaGCCACATCATCGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFLQMAL*PHHRFL
Trigger: CAGGAAACGATGATGTGGCAACAATGCCATCTGGAG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTTCCCGAGGGAGATGTaGAACTTTAAGAACTGGGGC +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFFPREM*NFKNWG
Trigger: GCCCCAGTTCTTAAAGTTCAACATCTCCCTCGGGAA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTCTCGGCATTCACATTaGCCATCTTTACAGGTCCCG +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFSRHSH*PSLQVP
Trigger: CGGGACCTGTAAAGATGGCAAATGTGAATGCCGAGA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATCTCCCTCATTATCCTaGTTATCAGCACAGGAAGTT +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMASPSLS*LSAQEV
Trigger: AACTTCCTGTGCTGATAACAAGGATAATGAGGGAGA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAATCTGTAGTTACTACTaGGCCTCGGATGAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTICSYY*ASDERN
Trigger: GTTTCTCTCATCCGAGGCCAAGTAGTAACTACAGAT...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGATCTGTAGTTACTACTaGGCCTCGGATGAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRICSYY*ASDERN
Trigger: GTTTCTCTCATCCGAGGCCAAGTAGTAACTACAGAT...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAATTCCACTTTTAACATaGAGGATGTGGTGTTTGTCT +
Preference number: 5 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGIPLLT*RMWCLS
Trigger: AGACAAACACCACATCCTCAATGTTAAAAGTGGAAT...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTCCTCGGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGATTCGAAGGATGACATaGTTCTCTAGAACATACAAG +
Preference number: 5 (lower is better)
Translates to: FLGIFSRALVYFRMRDFSIRRMT*FSRTYK
Trigger: CTTGTATGTTCTAGAGAACAATGTCATCCTTCGAAT...CGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCCGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ACACTTTGCGTCTCTTTTCTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGTAGCTGTTCCGAACTaGATCTTGTACCACTGTGTA +
Preference number: 5 (lower is better)
Translates to: TLCVSFLRRPRTSGSYFRVAVPN*ILYHCV
Trigger: TACACAGTGGTACAAGATCAAGTTCGGAACAGCTAC...CCTAAAATATGACCCACTTGTTCTGGGTCTACGCAGAAAAGAGACGCAAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTTGATCATGAGGCCGTaGATGCTGAACACAGCCAGA +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFLIMRP*MLNTAR
Trigger: TCTGGCTGTGTTCAGCATCAACGGCCTCATGATCAA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGTGTACTGCAGCTGTTaGATCATGAGGCCGTTGATG +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFVYCSC*IMRPLM
Trigger: CATCAACGGCCTCATGATCAAACAGCTGCAGTACAC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GGAATTTTCAGCCGGGCTTTAGTCTACTTCAGGATGAGGGACTTCTCGCTTGGAAGAGGATTGTTGCTCTaGAACATATACAGGTTAAAG +
Preference number: 5 (lower is better)
Translates to: GIFSRALVYFRMRDFSLGRGLLL*NIYRLK
Trigger: CTTTAACCTGTATATGTTCAAGAGCAACAATCCTCT...TCCAAGCGAGAAGTCCCTCATCCTGAAGTAGACTAAAGCCCGGCTGAAAATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CTGCGTAGACCCAGAACAAGTGGGTCATATTTTAGGGGAACTTGGAACATTGTGTCACTGCTGAGAGGATaGTTGCTCTTGAACATATAC +
Preference number: 5 (lower is better)
Translates to: LRRPRTSGSYFRGTWNIVSLLRG*LLLNIY
Trigger: GTATATGTTCAAGAGCAACAATCCTCTCAGCAGTGA...CACAATGTTCCAAGTTCCCCTAAAATATGACCCACTTGTTCTGGGTCTACGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAGCTGTCCATTCTCACTaGCTTGACTCTCTGACAATT +
Preference number: 5 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTAVHSH*LDSLTI
Trigger: AATTGTCAGAGAGTCAAGCAAGTGAGAATGGACAGC...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp CAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAGGGGAACTTGGAACATaGTGTGTGTCTGTTCATTCA +
Preference number: 5 (lower is better)
Translates to: QTTPCNCVLLSTMESPKTGELGT*CVSVHS
Trigger: TGAATGAACAGACACACACAATGTTCCAAGTTCCCC...TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTCGCTTCTTTGTTTATaGGTCCGTGTGTTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADSLLCL*VRVFVL
Trigger: CAAAACAAACACACGGACCAATAAACAAAGAAGCGA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS TCA 90 bp TTAGGTCTTCATCTCCTTAGGAGAGGAGATAACAGTTACTCCTGCTaGGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGTTACCTC +
Preference number: 5 (lower is better)
Translates to: LGLHLLRRGDNSYSC*AIQTRNGSRLFCYL
Trigger: GAGGTAACAAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAAGGAGATGAAGACCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATCTAGGACAACAGTATaGAAGGAAACCATCTCTTTG +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMASRTTV*KETISL
Trigger: CAAAGAGATGGTTTCCTTCAATACTGTTGTCCTAGA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTTGTGTGCTGGGTTGTaGCTATGTTTAAACTCTTTA +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADLCAGL*LCLNSL
Trigger: TAAAGAGTTTAAACATAGCAACAACCCAGCACACAA...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATACTTGTGTGCTGGGTaGTTGCTATGTTTAAACTCT +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAYLCAG*LLCLNS
Trigger: AGAGTTTAAACATAGCAACAACCCAGCACACAAGTA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATATTCGAAGGATGACATaGTTCTCTAGAACATACAAG +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADIRRMT*FSRTYK
Trigger: CTTGTATGTTCTAGAGAACAATGTCATCCTTCGAAT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGTACTATATGTGAAATaGTACAAGTACTCCCCTGTC +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAVLYVK*YKYSPV
Trigger: GACAGGGGAGTACTTGTACAATTTCACATATAGTAC...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATAGGGAATTCCCATTATaGTCAATCAATTCAGTGACA +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADREFPL*SINSVT
Trigger: TGTCACTGAATTGATTGACAATAATGGGAATTCCCT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ACCTCTACCGAAACTGATACCCACGAACTACGGAATCTAAACAGACTACACCCTACAATCTCTGATAACTaGGAGAGTTTCCCATACTTG +
Preference number: 5 (lower is better)
Translates to: TSTETDTHELRNLNRLHPTISDN*ESFPYL
Trigger: CAAGTATGGGAAACTCTCCAAGTTATCAGAGATTGT...AGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTTCGGTAGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp ACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAGAGTATGAAATTTATGAGGCGCACACTGTaGCCTGGGTTCAGTAAGTGG +
Preference number: 5 (lower is better)
Translates to: TAYYCPQWNLQRQKSMKFMRRTL*PGFSKW
Trigger: CCACTTACTGAACCCAGGCAACAGTGTGCGCCTCAT...AAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTAGGAGGCCCTTGGAATaGTATTCGAAGATGTCAGAC +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFRRPLE*YSKMSD
Trigger: GTCTGACATCTTCGAATACAATTCCAAGGGCCTCCT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp GAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATAGAGGATTGTTGCTCTaGAACATATACAGGTTAAAG +
Preference number: 5 (lower is better)
Translates to: EEITVTPAEPFRQGMAADRGLLL*NIYRLK
Trigger: CTTTAACCTGTATATGTTCAAGAGCAACAATCCTCT...ATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CGAAAATGTCAGAAGTATTTGTCCTACAAGCAGTCTGAGTGGTTTGTCCCGCAGAGGGAATTCCCATTATaGTCAATCAATTCAGTGACA +
Preference number: 5 (lower is better)
Translates to: RKCQKYLSYKQSEWFVPQREFPL*SINSVT
Trigger: TGTCACTGAATTGATTGACAATAATGGGAATTCCCT...CTGCGGGACAAACCACTCAGACTGCTTGTAGGACAAATACTTCTGACATTTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTGTAGCTGTTCCGAACTaGATCTTGTACCACTGTGTA +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFVAVPN*ILYHCV
Trigger: TACACAGTGGTACAAGATCAAGTTCGGAACAGCTAC...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCTTAAAAACTGGATGTaGCTGCTACTGTCTGCAAGC +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFLKNWM*LLLSAS
Trigger: GCTTGCAGACAGTAGCAGCAACATCCAGTTTTTAAG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp TTAGGAGAGGAGATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCATTCTCATCATCTGATTaGTTTTCGTTGTCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: LGEEITVTPAEPFRQGMAFSSSD*FSLSES
Trigger: TGACTCTGACAACGAAAACAAATCAGATGATGAGAA...TGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTATCTCCTCTCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS-3UTR CAA 90 bp ACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAGAGTATGAAATTTGTTGGTGTCCATGATTaGATGGGAGGTGTTGCTGTC +
Preference number: 5 (lower is better)
Translates to: TAYYCPQWNLQRQKSMKFVGVHD*MGGVAV
Trigger: GACAGCAACACCTCCCATCAAATCATGGACACCAAC...AAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTCTCCCTCATTATCCTaGTTATCAGCACAGGAAGTT +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFSPSLS*LSAQEV
Trigger: AACTTCCTGTGCTGATAACAAGGATAATGAGGGAGA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTCCGTATTTTGGGTACTaGACAAAAGACACGTTCACA +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFPYFGY*TKDTFT
Trigger: TGTGAACGTGTCTTTTGTCAAGTACCCAAAATACGG...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp CCTTCTTTCTTATCTTCGCTTCTTTGTTTATTGGTCCGTGTGTTTGTTTTGTTTGTTCCGAACTTGATCTaGTACCACTGTGTAGGAGGC +
Preference number: 5 (lower is better)
Translates to: PSFLSSLLCLLVRVFVLFVPNLI*YHCVGG
Trigger: GCCTCCTACACAGTGGTACAAGATCAAGTTCGGAAC...AAACAAAACAAACACACGGACCAATAAACAAAGAAGCGAAGATAAGAAAGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp CCTTCTTTCTTATCTTCGCTTCTTTGTTTATTGGTCCGTGTGTTTGTTTTGTTTCCATCGTCGTCAATTTaGTACTGCACATCCCCGAGT +
Preference number: 5 (lower is better)
Translates to: PSFLSSLLCLLVRVFVLFPSSSI*YCTSPS
Trigger: ACTCGGGGATGTGCAGTACAAAATTGACGACGATGG...AAACAAAACAAACACACGGACCAATAAACAAAGAAGCGAAGATAAGAAAGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTCACTGCTGAGAGGATaGTTGCTCTTGAACATATAC +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFSLLRG*LLLNIY
Trigger: GTATATGTTCAAGAGCAACAATCCTCTCAGCAGTGA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTCTAGGACAACAGTATaGAAGGAAACCATCTCTTTG +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFSRTTV*KETISL
Trigger: CAAAGAGATGGTTTCCTTCAATACTGTTGTCCTAGA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAGAGTATGAAATTTTCTCTCTGTTGTCTGTaGGACACCTGTAATGAGCTG +
Preference number: 5 (lower is better)
Translates to: TAYYCPQWNLQRQKSMKFSLCCL*DTCNEL
Trigger: CAGCTCATTACAGGTGTCCAACAGACAACAGAGAGA...AAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTATTCCACTTTTAACATaGAGGATGTGGTGTTTGTCT +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFIPLLT*RMWCLS
Trigger: AGACAAACACCACATCCTCAATGTTAAAAGTGGAAT...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS-3UTR CAA 90 bp ATAACAGTTACTCCTGCTGAGCCATTCAGACAAGGAATGGCAGCAGATTATTTTTTGTGTGCTGGGTTGTaGCTATGTTTAAACTCTTTA +
Preference number: 5 (lower is better)
Translates to: ITVTPAEPFRQGMAADYFLCAGL*LCLNSL
Trigger: TAAAGAGTTTAAACATAGCAACAACCCAGCACACAA...AAAATAATCTGCTGCCATTCCTTGTCTGAATGGCTCAGCAGGAGTAACTGTTAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS-3UTR CAA 90 bp ACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAGAGTATGAAATTTTACATGAGCCCATTCTaGTCTACTGCAATACCTCTC +
Preference number: 5 (lower is better)
Translates to: TAYYCPQWNLQRQKSMKFYMSPF*STAIPL
Trigger: GAGAGGTATTGCAGTAGACAAGAATGGGCTCATGTA...AAATTTCATACTCTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp AGTGAGGTAATTGGATATGAGGCCTTCTTTCTTATCTTCGCTTCTTTGTTTATTACGTCATCATCACGGTaGGAGTTCTCAATGTCAATG +
Preference number: 5 (lower is better)
Translates to: SEVIGYEAFFLIFASLFITSSSR*EFSMSM
Trigger: CATTGACATTGAGAACTCCAACCGTGATGATGACGT...AATAAACAAAGAAGCGAAGATAAGAAAGAAGGCCTCATATCCAATTACCTCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp CCTTCTTTCTTATCTTCGCTTCTTTGTTTATTGGTCCGTGTGTTTGTTTTGTTTTACTTGTGTGCTGGGTaGTTGCTATGTTTAAACTCT +
Preference number: 5 (lower is better)
Translates to: PSFLSSLLCLLVRVFVLFYLCAG*LLCLNS
Trigger: AGAGTTTAAACATAGCAACAACCCAGCACACAAGTA...AAACAAAACAAACACACGGACCAATAAACAAAGAAGCGAAGATAAGAAAGAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS-3UTR CAA 90 bp AGTGAGGTAATTGGATATGAGGCCTTCTTTCTTATCTTCGCTTCTTTGTTTATTAAATGTCAGAAGTATTaGTCCTACAAGCAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: SEVIGYEAFFLIFASLFIKCQKY*SYKQSE
Trigger: CTCAGACTGCTTGTAGGACAAATACTTCTGACATTT...AATAAACAAAGAAGCGAAGATAAGAAAGAAGGCCTCATATCCAATTACCTCACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS CCA 72 bp GGGGGTGGGAGAGGGGGCCTCAGAGTCGACTGGCTGTaGTGGTTCGGAGGGCCACTGCTGGAGGCTTGCTGG +
Preference number: 6 (lower is better)
Translates to: GGGRGGLRVDWL*WFGGPLLEACW
Trigger: CCAGCAAGCCTCCAGCAGTGGCCCTCCGAACCACCACAGCCAGTCGACTCTGAGGCCCCCTCTCCCACCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000517586.1
ENST00000518659.5
ENST00000519204.5
ENST00000520393.5
CDS GCA 72 bp GATCGCAGCTGCAGAGGCCCGTGTCAGGCAGGTACGTaGCATGCCCACTGCACTGGTCTGGGCACTGGACCC +
Preference number: 6 (lower is better)
Translates to: DRSCRGPCQAGT*HAHCTGLGTGP
Trigger: GGGTCCAGTGCCCAGACCAGTGCAGTGGGCATGGCACGTACCTGCCTGACACGGGCCTCTGCAGCTGCGATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 72 bp GGGCCAATCCGTCTGGCCCTGCTGAATGATGTCCAGTaGGTCCCGGGACCCCCGGCAGAGCAGGCTGTTCTG +
Preference number: 6 (lower is better)
Translates to: GPIRLALLNDVQ*VPGPPAEQAVL
Trigger: CAGAACAGCCTGCTCTGCCGGGGGTCCCGGGACCCACTGGACATCATTCAGCAGGGCCAGACGGATTGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
ENST00000521126.1
CDS CCA 72 bp GGTGGGAGAGGGGGCCTCAGAGTCGACTGGCTGTGGTaGTTCGGAGGGCCTGGACGACTCAAGGGCAGTGCA +
Preference number: 6 (lower is better)
Translates to: GGRGGLRVDWLW*FGGPGRLKGSA
Trigger: TGCACTGCCCTTGAGTCGTCCAGGCCCTCCGAACCACCACAGCCAGTCGACTCTGAGGCCCCCTCTCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518693.1
CDS CCA 72 bp GGGGGTGGGAGAGGGGGCCTCAGAGTCGACTGGCTGTaGTGGTTCGGAGGGCCCAGAGACTCCATCACAACC +
Preference number: 6 (lower is better)
Translates to: GGGRGGLRVDWL*WFGGPRDSITT
Trigger: GGTTGTGATGGAGTCTCTGGGCCCTCCGAACCACCACAGCCAGTCGACTCTGAGGCCCCCTCTCCCACCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520394.5
CDS CAA 90 bp AGCGTGGGCTGGGACACGGTCACGTTCACCCCGCTCTCTAGCACCTaGCGGCCGATGGTGGTGCCTAGTGTGACCAGGTCGCCATCGGCT +
Preference number: 6 (lower is better)
Translates to: SVGWDTVTFTPLSST*RPMVVPSVTRSPSA
Trigger: AGCCGATGGCGACCTGGTCACACTAGGCACCACCATCGGCCGCAAGGTGCTAGAGAGCGGGGTGAACGTGACCGTGTCCCAGCCCACGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 72 bp ACTTCACTGCGGGCCAATCCGTCTGGCCCTGCTGAATaGTGTCCAGTGGGTCCCGGGACCCCCGGCAGAGCA +
Preference number: 6 (lower is better)
Translates to: TSLRANPSGPAE*CPVGPGTPGRA
Trigger: TGCTCTGCCGGGGGTCCCGGGACCCACTGGACATCATTCAGCAGGGCCAGACGGATTGGCCCGCAGTGAAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
ENST00000521126.1
CDS GCA 72 bp CAGAGCAGTCGGGACCCATCCAGTTGGGATCGCAGCTaGAGAGGCCCGTGTCAGGCAGGTACGTGCCATGCC +
Preference number: 6 (lower is better)
Translates to: QSSRDPSSWDRS*RGPCQAGTCHA
Trigger: GGCATGGCACGTACCTGCCTGACACGGGCCTCTGCAGCTGCGATCCCAACTGGATGGGTCCCGACTGCTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 72 bp GTGGTGGTTCGGAGGGCCTGGACGACTCAAGGGCAGTaGAGCCTGCACACCCGTCCTGCCGAACGCGTACTA +
Preference number: 6 (lower is better)
Translates to: VVVRRAWTTQGQ*SLHTRPAERVL
Trigger: TAGTACGCGTTCGGCAGGACGGGTGTGCAGGCTGCACTGCCCTTGAGTCGTCCAGGCCCTCCGAACCACCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518693.1
CDS CCA 72 bp TCTCCATTTCCCGGTGCAGACTGGTTACCACCCCCGTaGGGCGCGTCACGTTGGTCAGGCGGCCTTCGTGGT +
Preference number: 6 (lower is better)
Translates to: SPFPGADWLPPP*GASRWSGGLRG
Trigger: ACCACGAAGGCCGCCTGACCAACGTGACGCGCCCCACGGGGGTGGTAACCAGTCTGCACCGGGAAATGGAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 72 bp GGCCGGGGCGTGGATCTGACTCCGCCGATTGGTCAGTaGGTTCCTGTTGAGGGAGTTGGCGGACGAGTGGTG +
Preference number: 6 (lower is better)
Translates to: GRGVDLTPPIGQ*VPVEGVGGRVV
Trigger: CACCACTCGTCCGCCAACTCCCTCAACAGGAACTCACTGACCAATCGGCGGAGTCAGATCCACGCCCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518659.5
ENST00000518693.1
ENST00000519204.5
ENST00000520393.5
ENST00000520394.5
ENST00000522488.1
CDS CCA 72 bp GTCAGGCAGGTACGTGCCATGCCCACTGCACTGGTCTaGGCACTGGACCCTCGCCAGCTCACAGTTCAGACC +
Preference number: 6 (lower is better)
Translates to: VRQVRAMPTALV*ALDPRQLTVQT
Trigger: GGTCTGAACTGTGAGCTGGCGAGGGTCCAGTGCCCAGACCAGTGCAGTGGGCATGGCACGTACCTGCCTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 72 bp GGTGGGAGAGGGGGCCTCAGAGTCGACTGGCTGTGGTaGTTCGGAGGGCCCAGAGACTCCATCACAACCTTC +
Preference number: 6 (lower is better)
Translates to: GGRGGLRVDWLW*FGGPRDSITTF
Trigger: GAAGGTTGTGATGGAGTCTCTGGGCCCTCCGAACCACCACAGCCAGTCGACTCTGAGGCCCCCTCTCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520394.5
CDS CAA 72 bp AGCCCAGCCAGGCGCCCATTGAAGAAGTATGACACGTaGACAGCTGCCAGCCCGCTGCTGGGCAGCCAGAGG +
Preference number: 6 (lower is better)
Translates to: SPARRPLKKYDT*TAASPLLGSQR
Trigger: CCTCTGGCTGCCCAGCAGCGGGCTGGCAGCTGTCAACGTGTCATACTTCTTCAATGGGCGCCTGGCTGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 72 bp CCGTCAGCGAACATGCGGGACACGATGCGGCCTTGCTaGTCGATGTCTGTCCTCTCGCTCATGGCCCCACGC +
Preference number: 6 (lower is better)
Translates to: PSANMRDTMRPC*SMSVLSLMAPR
Trigger: GCGTGGGGCCATGAGCGAGAGGACAGACATCGACAAGCAAGGCCGCATCGTGTCCCGCATGTTCGCTGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 72 bp TGGGACACGGTCACGTTCACCCCGCTCTCTAGCACCTaGCGGCCGATGGTGGTGCCTAGTGTGACCAGGTCG +
Preference number: 6 (lower is better)
Translates to: WDTVTFTPLSST*RPMVVPSVTRS
Trigger: CGACCTGGTCACACTAGGCACCACCATCGGCCGCAAGGTGCTAGAGAGCGGGGTGAACGTGACCGTGTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 72 bp CAGGAGCCGTGGCCCCCGCAGGAAGGATCGATGCACTaGTTCATGGGCACGTCGCACTCTGCACCTTTCCAG +
Preference number: 6 (lower is better)
Translates to: QEPWPPQEGSMH*FMGTSHSAPFQ
Trigger: CTGGAAAGGTGCAGAGTGCGACGTGCCCATGAATCAGTGCATCGATCCTTCCTGCGGGGGCCACGGCTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 72 bp ACGCTGAAGCCCAGCCAGGCGCCCATTGAAGAAGTATaGCACGTTGACAGCTGCCAGCCCGCTGCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: TLKPSQAPIEEV*HVDSCQPAAGQ
Trigger: CTGCCCAGCAGCGGGCTGGCAGCTGTCAACGTGTCATACTTCTTCAATGGGCGCCTGGCTGGGCTTCAGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 72 bp TGTTCAGCACAGATGCCACCTTGCGGCTATCTTCGCTaGCGATGCTGGACACGCCCGTGGTCACCCGCCCTT +
Preference number: 6 (lower is better)
Translates to: CSAQMPPCGYLR*RCWTRPWSPAL
Trigger: AAGGGCGGGTGACCACGGGCGTGTCCAGCATCGCCAGCGAAGATAGCCGCAAGGTGGCATCTGTGCTGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 72 bp AAGGATCCCCATGTCGGAGCAGTAGCCGCTTCGGTGTaGGGAGGGCTCACAGATGCCCAGTTCGGCAAGGGT +
Preference number: 6 (lower is better)
Translates to: KDPHVGAVAASV*GGLTDAQFGKG
Trigger: ACCCTTGCCGAACTGGGCATCTGTGAGCCCTCCCCACACCGAAGCGGCTACTGCTCCGACATGGGGATCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS CAA 72 bp GAGCACACTTCAACAGAGCAGTCGGGACCCATCCAGTaGGGATCGCAGCTGCAGAGGCCCGTGTCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: EHTSTEQSGPIQ*GSQLQRPVSGR
Trigger: CCTGCCTGACACGGGCCTCTGCAGCTGCGATCCCAACTGGATGGGTCCCGACTGCTCTGTTGAAGTGTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 90 bp GCTCCACACTTTCCCGTCAGCGAACATGCGGGACACGATGCGGCCTaGCTTGTCGATGTCTGTCCTCTCGCTCATGGCCCCACGCTGAAG +
Preference number: 6 (lower is better)
Translates to: APHFPVSEHAGHDAA*LVDVCPLAHGPTLK
Trigger: CTTCAGCGTGGGGCCATGAGCGAGAGGACAGACATCGACAAGCAAGGCCGCATCGTGTCCCGCATGTTCGCTGACGGGAAAGTGTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 72 bp TCGCCAGCTCACAGTTCAGACCACCCCAGCCAGGGCTaGACAGGCATTCTCCATTCACACAGACTCCGTGGC +
Preference number: 6 (lower is better)
Translates to: SPAHSSDHPSQG*TGILHSHRLRG
Trigger: GCCACGGAGTCTGTGTGAATGGAGAATGCCTGTGCAGCCCTGGCTGGGGTGGTCTGAACTGTGAGCTGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 72 bp CACAGCGGCAGGCTCCCCCGATGCAGACGCCGTGAGTaGCACAGTCTACTGAGCACACTTCAACAGAGCAGT +
Preference number: 6 (lower is better)
Translates to: HSGRLPRCRRRE*HSLLSTLQQSS
Trigger: ACTGCTCTGTTGAAGTGTGCTCAGTAGACTGTGGCACTCACGGCGTCTGCATCGGGGGAGCCTGCCGCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 72 bp TTCCCGTCAGCGAACATGCGGGACACGATGCGGCCTTaGTTGTCGATGTCTGTCCTCTCGCTCATGGCCCCA +
Preference number: 6 (lower is better)
Translates to: FPSANMRDTMRP*LSMSVLSLMAP
Trigger: TGGGGCCATGAGCGAGAGGACAGACATCGACAAGCAAGGCCGCATCGTGTCCCGCATGTTCGCTGACGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 72 bp AGCACACTTCAACAGAGCAGTCGGGACCCATCCAGTTaGGATCGCAGCTGCAGAGGCCCGTGTCAGGCAGGT +
Preference number: 6 (lower is better)
Translates to: STLQQSSRDPSS*DRSCRGPCQAG
Trigger: ACCTGCCTGACACGGGCCTCTGCAGCTGCGATCCCAACTGGATGGGTCCCGACTGCTCTGTTGAAGTGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 72 bp GCAGACTGGTTACCACCCCCGTGGGGCGCGTCACGTTaGTCAGGCGGCCTTCGTGGTCATAGTCATAGAAAG +
Preference number: 6 (lower is better)
Translates to: ADWLPPPWGASR*SGGLRGHSHRK
Trigger: CTTTCTATGACTATGACCACGAAGGCCGCCTGACCAACGTGACGCGCCCCACGGGGGTGGTAACCAGTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 72 bp TTTCCCGTCAGCGAACATGCGGGACACGATGCGGCCTaGCTTGTCGATGTCTGTCCTCTCGCTCATGGCCCC +
Preference number: 6 (lower is better)
Translates to: FPVSEHAGHDAA*LVDVCPLAHGP
Trigger: GGGGCCATGAGCGAGAGGACAGACATCGACAAGCAAGGCCGCATCGTGTCCCGCATGTTCGCTGACGGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 72 bp TGGGCACGCGGCAGTCCTCACTGTCCAGAGAGGAGCTaGTGTAGCGACACTCTTTGCCACAGCGTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: WARGSPHCPERS*CSDTLCHSVLW
Trigger: CCAGAGGACGCTGTGGCAAAGAGTGTCGCTACACAAGCTCCTCTCTGGACAGTGAGGACTGCCGCGTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS CAA 90 bp CAGTCTACTGAGCACACTTCAACAGAGCAGTCGGGACCCATCCAGTaGGGATCGCAGCTGCAGAGGCCCGTGTCAGGCAGGTACGTGCCA +
Preference number: 6 (lower is better)
Translates to: QSTEHTSTEQSGPIQ*GSQLQRPVSGRYVP
Trigger: TGGCACGTACCTGCCTGACACGGGCCTCTGCAGCTGCGATCCCAACTGGATGGGTCCCGACTGCTCTGTTGAAGTGTGCTCAGTAGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 90 bp GTGGAGTACTGGAACTCAATGTTCGTGAACCTTCGAGTCCTGCCGTaGACCAGCAGCGTGGGCTGGGACACGGTCACGTTCACCCCGCTC +
Preference number: 6 (lower is better)
Translates to: VEYWNSMFVNLRVLP*TSSVGWDTVTFTPL
Trigger: GAGCGGGGTGAACGTGACCGTGTCCCAGCCCACGCTGCTGGTCAACGGCAGGACTCGAAGGTTCACGAACATTGAGTTCCAGTACTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 72 bp GGATCTGACTCCGCCGATTGGTCAGTGAGTTCCTGTTaGGGGAGTTGGCGGACGAGTGGTGATGGGACAGCG +
Preference number: 6 (lower is better)
Translates to: GSDSADWSVSSC*GSWRTSGDGTA
Trigger: CGCTGTCCCATCACCACTCGTCCGCCAACTCCCTCAACAGGAACTCACTGACCAATCGGCGGAGTCAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518659.5
ENST00000518693.1
ENST00000519204.5
ENST00000520393.5
ENST00000520394.5
ENST00000522488.1
CDS TCA 72 bp GTGAGGGTGATGATCTGGTTGTCAGGCATGAGCAGGTaGCGGGGCATGCCACTGCTGTCCCGACGGATCTTC +
Preference number: 6 (lower is better)
Translates to: VRVMIWLSGMSR*RGMPLLSRRIF
Trigger: GAAGATCCGTCGGGACAGCAGTGGCATGCCCCGTCACCTGCTCATGCCTGACAACCAGATCATCACCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 72 bp CTTTGTAGCCAGCAGAGCAGACACAGTTCCCATCAATaGAGGAGCCGTGGCCCCCGCAGGAAGGATCGATGC +
Preference number: 6 (lower is better)
Translates to: LCSQQSRHSSHQ*RSRGPRRKDRC
Trigger: GCATCGATCCTTCCTGCGGGGGCCACGGCTCCTGCATTGATGGGAACTGTGTCTGCTCTGCTGGCTACAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 72 bp CGTCCAATGGTGGGGGTGATGGTGCCCGCTAGGACATaGGGCTCGCTGTGGAAGCTGATACCCATCCCATTA +
Preference number: 6 (lower is better)
Translates to: RPMVGVMVPART*GSLWKLIPIPL
Trigger: TAATGGGATGGGTATCAGCTTCCACAGCGAGCCCCATGTCCTAGCGGGCACCATCACCCCCACCATTGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000517941.1
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 72 bp TGTTCCACGGCAGCCACACAGTGCGCTCCTGGCTCATaGACGGGGCTCGCTCAAAGTGTAGAGTCAAGGAAG +
Preference number: 6 (lower is better)
Translates to: CSTAATQCAPGS*TGLAQSVESRK
Trigger: CTTCCTTGACTCTACACTTTGAGCGAGCCCCGTTCATGAGCCAGGAGCGCACTGTGTGGCTGCCGTGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 72 bp TTGTCGATGTCTGTCCTCTCGCTCATGGCCCCACGCTaGAGCCCAGCCAGGCGCCCATTGAAGAAGTATGAC +
Preference number: 6 (lower is better)
Translates to: LSMSVLSLMAPR*SPARRPLKKYD
Trigger: GTCATACTTCTTCAATGGGCGCCTGGCTGGGCTTCAGCGTGGGGCCATGAGCGAGAGGACAGACATCGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 72 bp GTCGGACACGTAGAGCGAGCCGGACACGGGGTCCACTaGCAAGTAGTACTTGTGTGCTGGGTTGTTGCTATG +
Preference number: 6 (lower is better)
Translates to: VGHVERAGHGVH*QVVLVCWVVAM
Trigger: CATAGCAACAACCCAGCACACAAGTACTACTTGGCAGTGGACCCCGTGTCCGGCTCGCTCTACGTGTCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS GCA 72 bp TCCACACTTTCCCGTCAGCGAACATGCGGGACACGATaGGGCCTTGCTTGTCGATGTCTGTCCTCTCGCTCA +
Preference number: 6 (lower is better)
Translates to: STLSRQRTCGTR*GLACRCLSSRS
Trigger: TGAGCGAGAGGACAGACATCGACAAGCAAGGCCGCATCGTGTCCCGCATGTTCGCTGACGGGAAAGTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 72 bp GGTAGGAGTAGCTCCACACTTTCCCGTCAGCGAACATaGGGGACACGATGCGGCCTTGCTTGTCGATGTCTG +
Preference number: 6 (lower is better)
Translates to: GRSSSTLSRQRT*GTRCGLACRCL
Trigger: CAGACATCGACAAGCAAGGCCGCATCGTGTCCCGCATGTTCGCTGACGGGAAAGTGTGGAGCTACTCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 72 bp CACTGTCCAGAGAGGAGCTTGTGTAGCGACACTCTTTaGCACAGCGTCCTCTGGTCAAAGAGCGGTGTCGCC +
Preference number: 6 (lower is better)
Translates to: HCPERSLCSDTL*HSVLWSKSGVA
Trigger: GGCGACACCGCTCTTTGACCAGAGGACGCTGTGGCAAAGAGTGTCGCTACACAAGCTCCTCTCTGGACAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS CCA 72 bp TTCAATTGTGCCAGCAACGCTAATGATCAGGAGAGGTaGGCTCACCATCGGCGTAAGCTGGGAGTGGGCCGC +
Preference number: 6 (lower is better)
Translates to: FNCASNANDQER*AHHRRKLGVGR
Trigger: GCGGCCCACTCCCAGCTTACGCCGATGGTGAGCCCACCTCTCCTGATCATTAGCGTTGCTGGCACAATTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS CCA 72 bp GGGGTGATGGTGCCCGCTAGGACATGGGGCTCGCTGTaGAAGCTGATACCCATCCCATTAGCATACATCACC +
Preference number: 6 (lower is better)
Translates to: GVMVPARTWGSL*KLIPIPLAYIT
Trigger: GGTGATGTATGCTAATGGGATGGGTATCAGCTTCCACAGCGAGCCCCATGTCCTAGCGGGCACCATCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000517941.1
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 72 bp CTACGCCATCATAGCGGTACTGGACACTCCACCCGCTaGCCTTGTTGTAGGCTCTTGTTAGGAGGCCCTTGG +
Preference number: 6 (lower is better)
Translates to: LRHHSGTGHSTR*PCCRLLLGGPW
Trigger: CCAAGGGCCTCCTAACAAGAGCCTACAACAAGGCCAGCGGGTGGAGTGTCCAGTACCGCTATGATGGCGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 72 bp TGGAACTCAATGTTCGTGAACCTTCGAGTCCTGCCGTaGACCAGCAGCGTGGGCTGGGACACGGTCACGTTC +
Preference number: 6 (lower is better)
Translates to: WNSMFVNLRVLP*TSSVGWDTVTF
Trigger: GAACGTGACCGTGTCCCAGCCCACGCTGCTGGTCAACGGCAGGACTCGAAGGTTCACGAACATTGAGTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 90 bp AGACCAAGCTCCAGGTTCTGTGTGGACACGACTTTGAGGCCTCCATaGGTGCCCACGGTGAGGGTGATGATCTGGTTGTCAGGCATGAGC +
Preference number: 6 (lower is better)
Translates to: RPSSRFCVDTTLRPP*VPTVRVMIWLSGMS
Trigger: GCTCATGCCTGACAACCAGATCATCACCCTCACCGTGGGCACCAATGGAGGCCTCAAAGTCGTGTCCACACAGAACCTGGAGCTTGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 72 bp CCTTTGCCAATGATGGGCGTGGTGGTGGCAAACCAGTaGCCTGCTTTCTCTCGGATGCTGGCGTGGAGCTTT +
Preference number: 6 (lower is better)
Translates to: PLPMMGVVVANQ*PAFSRMLAWSF
Trigger: AAAGCTCCACGCCAGCATCCGAGAGAAAGCAGGTCACTGGTTTGCCACCACCACGCCCATCATTGGCAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 72 bp AACTGCGCCTGGATTTTATCCCTCTGCCCCACAGTCTaGTGGCGTGTTCTGGAGACATCCCTCCCTCGGTGT +
Preference number: 6 (lower is better)
Translates to: NCAWILSLCPTV*WRVLETSLPRC
Trigger: ACACCGAGGGAGGGATGTCTCCAGAACACGCCATCAGACTGTGGGGCAGAGGGATAAAATCCAGGCGCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS GCA 72 bp AGCTGTTCTGACCCAGTGTGCATCTCCCGTTACCGTTaGACAAGTCAGGGCAGCCATCTGTTTCGGTGCCTG +
Preference number: 6 (lower is better)
Translates to: SCSDPVCISRYR*TSQGSHLFRCL
Trigger: CAGGCACCGAAACAGATGGCTGCCCTGACTTGTGCAACGGTAACGGGAGATGCACACTGGGTCAGAACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 72 bp AGGAGAGGTGGGCTCACCATCGGCGTAAGCTGGGAGTaGGCCGCTCTTCGTTTTGTGTTTCCCTCTAACTAC +
Preference number: 6 (lower is better)
Translates to: RRGGLTIGVSWE*AALRFVFPSNY
Trigger: GTAGTTAGAGGGAAACACAAAACGAAGAGCGGCCCACTCCCAGCTTACGCCGATGGTGAGCCCACCTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS CCA 72 bp ATGATCAGGAGAGGTGGGCTCACCATCGGCGTAAGCTaGGAGTGGGCCGCTCTTCGTTTTGTGTTTCCCTCT +
Preference number: 6 (lower is better)
Translates to: MIRRGGLTIGVS*EWAALRFVFPS
Trigger: AGAGGGAAACACAAAACGAAGAGCGGCCCACTCCCAGCTTACGCCGATGGTGAGCCCACCTCTCCTGATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519204.5
ENST00000520394.5
CDS CCA 72 bp TGGTGGAGGATTATGGGAGCTAGGCAGCTGAGCAGATaGGAGGAGACTAGGCGAGGATGTAGGTGGAATGGG +
Preference number: 6 (lower is better)
Translates to: WWRIMGARQLSR*EETRRGCRWNG
Trigger: CCCATTCCACCTACATCCTCGCCTAGTCTCCTCCCATCTGCTCAGCTGCCTAGCTCCCATAATCCTCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000517586.1
ENST00000518659.5
ENST00000519204.5
ENST00000520393.5
CDS CCA 72 bp GGGCAGATTCCAGGCCAATTGGGTCCCCGGGAAAGCTaGAGAACTGCCTCTGGCTCCAACAGGAAGAAAATC +
Preference number: 6 (lower is better)
Translates to: GQIPGQLGPRES*RTASGSNRKKI
Trigger: GATTTTCTTCCTGTTGGAGCCAGAGGCAGTTCTCCAGCTTTCCCGGGGACCCAATTGGCCTGGAATCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521126.1
CDS CAA 72 bp ATGAGACCAAGCTCCAGGTTCTGTGTGGACACGACTTaGAGGCCTCCATTGGTGCCCACGGTGAGGGTGATG +
Preference number: 6 (lower is better)
Translates to: MRPSSRFCVDTT*RPPLVPTVRVM
Trigger: CATCACCCTCACCGTGGGCACCAATGGAGGCCTCAAAGTCGTGTCCACACAGAACCTGGAGCTTGGTCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 72 bp CCCGCCGACCAACTTCTGCTTCACCACTGTCTATGCTaGTGTTTTTCAACGACCAGGGCACTTTGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: PADQLLLHHCLC*CFSTTRALCLQ
Trigger: CTGGAGGCAAAGTGCCCTGGTCGTTGAAAAACAGCAGCATAGACAGTGGTGAAGCAGAAGTTGGTCGGCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS GCA 72 bp GCACAAACACGGCTTCATTCTGAACCAAGGTCTGTATaGTCCGGCGTTCCCTGGGAGACTCAACCACACTCC +
Preference number: 6 (lower is better)
Translates to: AQTRLHSEPRSV*SGVPWETQPHS
Trigger: GGAGTGTGGTTGAGTCTCCCAGGGAACGCCGGAGCATACAGACCTTGGTTCAGAATGAAGCCGTGTTTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 72 bp GCCAATGATGGGCGTGGTGGTGGCAAACCAGTGACCTaGTTTCTCTCGGATGCTGGCGTGGAGCTTTTTAGT +
Preference number: 6 (lower is better)
Translates to: ANDGRGGGKPVT*FLSDAGVELFS
Trigger: ACTAAAAAGCTCCACGCCAGCATCCGAGAGAAAGCAGGTCACTGGTTTGCCACCACCACGCCCATCATTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 72 bp CATCTTGTCCAGGTAGTAGGCGTTGTTCAGCACAGATaGCACCTTGCGGCTATCTTCGCTGGCGATGCTGGA +
Preference number: 6 (lower is better)
Translates to: HLVQVVGVVQHR*HLAAIFAGDAG
Trigger: TCCAGCATCGCCAGCGAAGATAGCCGCAAGGTGGCATCTGTGCTGAACAACGCCTACTACCTGGACAAGATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 72 bp CTGAGCAGATGGGAGGAGACTAGGCGAGGATGTAGGTaGAATGGGACGACCCAGAGACTCCATCACAACCTT +
Preference number: 6 (lower is better)
Translates to: LSRWEETRRGCR*NGTTQRLHHNL
Trigger: AAGGTTGTGATGGAGTCTCTGGGTCGTCCCATTCCACCTACATCCTCGCCTAGTCTCCTCCCATCTGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519204.5
CDS CCA 72 bp CATTCTGAACCAAGGTCTGTATGCTCCGGCGTTCCCTaGGAGACTCAACCACACTCCACTTCTCCTTCCCGT +
Preference number: 6 (lower is better)
Translates to: HSEPRSVCSGVP*ETQPHSTSPSR
Trigger: ACGGGAAGGAGAAGTGGAGTGTGGTTGAGTCTCCCAGGGAACGCCGGAGCATACAGACCTTGGTTCAGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 72 bp TTTCAGGCGGGTTGTAAATATTACGGATGTAGCCGATaGAGGTGTGTGTGGACATGCTGTGCCGGGCCACGC +
Preference number: 6 (lower is better)
Translates to: FQAGCKYYGCSR*RCVWTCCAGPR
Trigger: GCGTGGCCCGGCACAGCATGTCCACACACACCTCCATCGGCTACATCCGTAATATTTACAACCCGCCTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 72 bp AGCTTGTGTAGCGACACTCTTTGCCACAGCGTCCTCTaGTCAAAGAGCGGTGTCGCCGGTCCTTTACATCCA +
Preference number: 6 (lower is better)
Translates to: SLCSDTLCHSVL*SKSGVAGPLHP
Trigger: TGGATGTAAAGGACCGGCGACACCGCTCTTTGACCAGAGGACGCTGTGGCAAAGAGTGTCGCTACACAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS CAA 72 bp TCCAGGTTCTGTGTGGACACGACTTTGAGGCCTCCATaGGTGCCCACGGTGAGGGTGATGATCTGGTTGTCA +
Preference number: 6 (lower is better)
Translates to: SRFCVDTTLRPP*VPTVRVMIWLS
Trigger: TGACAACCAGATCATCACCCTCACCGTGGGCACCAATGGAGGCCTCAAAGTCGTGTCCACACAGAACCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 72 bp CTTCTCCTCTGCCAACAGAAGCTTGGTCACATCGGGTaGGTTCATCTGGGACAACTGCGGAAGGCCACCATC +
Preference number: 6 (lower is better)
Translates to: LLLCQQKLGHIG*VHLGQLRKATI
Trigger: GATGGTGGCCTTCCGCAGTTGTCCCAGATGAACCAACCCGATGTGACCAAGCTTCTGTTGGCAGAGGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517941.1
CDS GCA 72 bp TGCCAAGAGCTTGATACGGTCATAGAAGGACTTCACTaGGGGCCAATCCGTCTGGCCCTGCTGAATGATGTC +
Preference number: 6 (lower is better)
Translates to: CQELDTVIEGLH*GPIRLALLNDV
Trigger: GACATCATTCAGCAGGGCCAGACGGATTGGCCCGCAGTGAAGTCCTTCTATGACCGTATCAAGCTCTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
ENST00000521126.1
CDS GCA 72 bp AGAGTTTCCCATACTTGTAGAACACCTGGCGTCCGGTaGCCAAAAAGGAGGTCTTCAGGATGCGGCCGTCAT +
Preference number: 6 (lower is better)
Translates to: RVSHTCRTPGVR*PKRRSSGCGRH
Trigger: ATGACGGCCGCATCCTGAAGACCTCCTTTTTGGGCACCGGACGCCAGGTGTTCTACAAGTATGGGAAACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 72 bp GGGGAGGGGAGTCTCACTTATGACGGGCTTGATGCTTaGGATGCGGAAGCTGTTGTCATGATAGGTGTAGTC +
Preference number: 6 (lower is better)
Translates to: GEGSLTYDGLDA*DAEAVVMIGVV
Trigger: GACTACACCTATCATGACAACAGCTTCCGCATCGCAAGCATCAAGCCCGTCATAAGTGAGACTCCCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 72 bp TGCACAGGCATTCTCCATTCACACAGACTCCGTGGCTaGAGCAGGTGGGATCCAAGCAATCAACTTCCTCAC +
Preference number: 6 (lower is better)
Translates to: CTGILHSHRLRG*SRWDPSNQLPH
Trigger: GTGAGGAAGTTGATTGCTTGGATCCCACCTGCTCCAGCCACGGAGTCTGTGTGAATGGAGAATGCCTGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 72 bp TTCTCCTCTGCCAACAGAAGCTTGGTCACATCGGGTTaGTTCATCTGGGACAACTGCGGAAGGCCACCATCA +
Preference number: 6 (lower is better)
Translates to: FSSANRSLVTSG*FIWDNCGRPPS
Trigger: TGATGGTGGCCTTCCGCAGTTGTCCCAGATGAACCAACCCGATGTGACCAAGCTTCTGTTGGCAGAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517941.1
CDS CAA 72 bp CTGGATGTTGCTGCTACTGTCTGCAAGCTCTGGGTATaGCTCCACGGGAAGCACGTAATATCCCTCGTACCC +
Preference number: 6 (lower is better)
Translates to: LDVAATVCKLWV*LHGKHVISLVP
Trigger: GGGTACGAGGGATATTACGTGCTTCCCGTGGAGCAATACCCAGAGCTTGCAGACAGTAGCAGCAACATCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 90 bp CATAGCGGTACTGGACACTCCACCCGCTGGCCTTGTTGTAGGCTCTaGTTAGGAGGCCCTTGGAATTGTATTCGAAGATGTCAGACCCTC +
Preference number: 6 (lower is better)
Translates to: HSGTGHSTRWPCCRL*LGGPWNCIRRCQTL
Trigger: GAGGGTCTGACATCTTCGAATACAATTCCAAGGGCCTCCTAACAAGAGCCTACAACAAGGCCAGCGGGTGGAGTGTCCAGTACCGCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 90 bp CAGAGACTTCAGGAGTTTGCAGGGACAGAGGGTGCCTACCTGCTGTaGAAAGGGTTCTCTCCAGGAATGATGTGGGTGCTATCCTTGCCT +
Preference number: 6 (lower is better)
Translates to: QRLQEFAGTEGAYLL*KGFSPGMMWVLSLP
Trigger: AGGCAAGGATAGCACCCACATCATTCCTGGAGAGAACCCTTTCAACAGCAGGTAGGCACCCTCTGTCCCTGCAAACTCCTGAAGTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521126.1
CDS TCA 72 bp AATTCCCAGCCAGGTCTTTGGTTCCACTCAGAGACTTaGCGCGGTAGATTCTCCTGCTGTTGGTGTCGGACA +
Preference number: 6 (lower is better)
Translates to: NSQPGLWFHSET*RGRFSCCWCRT
Trigger: TGTCCGACACCAACAGCAGGAGAATCTACCGCGTCAAGTCTCTGAGTGGAACCAAAGACCTGGCTGGGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 72 bp TCGCGTAGGCATCATCTCCTGAATAGCAGTTGCAATTaGCATCGTTTTTGCAGTCGCAGTCCGAGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: SRRHHLLNSSCN*HRFCSRSPRLP
Trigger: GGGCAGCCTCGGACTGCGACTGCAAAAACGATGTCAATTGCAACTGCTATTCAGGAGATGATGCCTACGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 72 bp CCAGGCTCACAGTGTATTGGTGGATGCCATCAGCGTTaGAAACATATAACTCCTGCTCTCCGGGGGATGCAG +
Preference number: 6 (lower is better)
Translates to: PGSQCIGGCHQR*KHITPALRGMQ
Trigger: CTGCATCCCCCGGAGAGCAGGAGTTATATGTTTTCAACGCTGATGGCATCCACCAATACACTGTGAGCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 72 bp TGGTATTGGCATAGGGCCCCAGTTTTAGCTCCCTCTTaGTCACCCTGCCCATGCTGTCATATTGCACCGTCA +
Preference number: 6 (lower is better)
Translates to: WYWHRAPVLAPS*SPCPCCHIAPS
Trigger: TGACGGTGCAATATGACAGCATGGGCAGGGTGATCAAGAGGGAGCTAAAACTGGGGCCCTATGCCAATACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 72 bp TTACCCGCCGACCAACTTCTGCTTCACCACTGTCTATaGTGCTGTTTTTCAACGACCAGGGCACTTTGCCTC +
Preference number: 6 (lower is better)
Translates to: LPADQLLLHHCL*CCFSTTRALCL
Trigger: GAGGCAAAGTGCCCTGGTCGTTGAAAAACAGCAGCATAGACAGTGGTGAAGCAGAAGTTGGTCGGCGGGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS GCA 72 bp AGCTTGGTCACATCGGGTTGGTTCATCTGGGACAACTaGGGAAGGCCACCATCATTCTTAAACCCGGAGCTT +
Preference number: 6 (lower is better)
Translates to: SLVTSGWFIWDN*GRPPSFLNPEL
Trigger: AAGCTCCGGGTTTAAGAATGATGGTGGCCTTCCGCAGTTGTCCCAGATGAACCAACCCGATGTGACCAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517941.1
CDS CCA 72 bp CGCTGGCCTTGTTGTAGGCTCTTGTTAGGAGGCCCTTaGAATTGTATTCGAAGATGTCAGACCCTCTCTGGC +
Preference number: 6 (lower is better)
Translates to: RWPCCRLLLGGP*NCIRRCQTLSG
Trigger: GCCAGAGAGGGTCTGACATCTTCGAATACAATTCCAAGGGCCTCCTAACAAGAGCCTACAACAAGGCCAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 72 bp CTGAGCAGATGGGAGGAGACTAGGCGAGGATGTAGGTaGAATGGGACGACCATTCTGAAGCTTCATGTCTGT +
Preference number: 6 (lower is better)
Translates to: LSRWEETRRGCR*NGTTILKLHVC
Trigger: ACAGACATGAAGCTTCAGAATGGTCGTCCCATTCCACCTACATCCTCGCCTAGTCTCCTCCCATCTGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517586.1
CDS CAA 72 bp TTTTCAACGACCAGGGCACTTTGCCTCCAGATGGCATaGTTGCCACATCATCGTTTCCTGGTAAGCCGGTCC +
Preference number: 6 (lower is better)
Translates to: FSTTRALCLQMA*LPHHRFLVSRS
Trigger: GGACCGGCTTACCAGGAAACGATGATGTGGCAACAATGCCATCTGGAGGCAAAGTGCCCTGGTCGTTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS CAA 72 bp AACTCCTGCTCTCCGGGGGATGCAGCCTCATACTGGTaGAAGGCATTAAGAACAGGCTTGTTCTTGCTGACC +
Preference number: 6 (lower is better)
Translates to: NSCSPGDAASYW*KALRTGLFLLT
Trigger: GGTCAGCAAGAACAAGCCTGTTCTTAATGCCTTCAACCAGTATGAGGCTGCATCCCCCGGAGAGCAGGAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 90 bp CCGGGGGATGCAGCCTCATACTGGTTGAAGGCATTAAGAACAGGCTaGTTCTTGCTGACCGCCCTGATCCGAATATTTCCAAGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: PGDAASYWLKALRTG*FLLTALIRIFPRSA
Trigger: TGCAGACCTTGGAAATATTCGGATCAGGGCGGTCAGCAAGAACAAGCCTGTTCTTAATGCCTTCAACCAGTATGAGGCTGCATCCCCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 90 bp GTGCCTTTGTGTAGGATTCCACTTTTAACATTGAGGATGTGGTGTTaGTCTAGGGACCAGCCACCGAGGTTGGAGGGGTCCAGCTCGAAT +
Preference number: 6 (lower is better)
Translates to: VPLCRIPLLTLRMWC*SRDQPPRLEGSSSN
Trigger: ATTCGAGCTGGACCCCTCCAACCTCGGTGGCTGGTCCCTAGACAAACACCACATCCTCAATGTTAAAAGTGGAATCCTACACAAAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 90 bp CCAGGGAATCAACAGGTGTCTCCAGCAGGTTCTGGGTTAAAGATGTaGACATCCTGCAAAGACACTAGGGCTCTGTTCTGGAGCCCAACA +
Preference number: 6 (lower is better)
Translates to: PGNQQVSPAGSGLKM*TSCKDTRALFWSPT
Trigger: TGTTGGGCTCCAGAACAGAGCCCTAGTGTCTTTGCAGGATGTCAACATCTTTAACCCAGAACCTGCTGGAGACACCTGTTGATTCCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521126.1
CDS TCA 72 bp GGGGAGAATTCCTCATCAGGGTTGGTGTCCATGATTTaGTGGGAGGTGTTGCTGTCTAGCAATGGCATCTGG +
Preference number: 6 (lower is better)
Translates to: GENSSSGLVSMI*WEVLLSSNGIW
Trigger: CCAGATGCCATTGCTAGACAGCAACACCTCCCATCAAATCATGGACACCAACCCTGATGAGGAATTCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517586.1
ENST00000518659.5
ENST00000519204.5
ENST00000520393.5
CDS TCA 72 bp CAACCTTCCGGATCATGGTGGCATCGACAAAGTACATaGGCCCATTCTTGTCTACTGCAATACCTCTCGGGC +
Preference number: 6 (lower is better)
Translates to: QPSGSWWHRQST*AHSCLLQYLSG
Trigger: GCCCGAGAGGTATTGCAGTAGACAAGAATGGGCTCATGTACTTTGTCGATGCCACCATGATCCGGAAGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 72 bp AAGCTGCTGTTGAAAGGGTTCTCTCCAGGAATGATGTaGGTGCTATCCTTGCCTGCCAAGAGCTTGATACGG +
Preference number: 6 (lower is better)
Translates to: KLLLKGFSPGMM*VLSLPAKSLIR
Trigger: CCGTATCAAGCTCTTGGCAGGCAAGGATAGCACCCACATCATTCCTGGAGAGAACCCTTTCAACAGCAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 72 bp AGTCATAGAAAGTCGTCCATCCTGTTTCATCGCTCTTaGTGGCCAGGAGCCCAGTGTTGCCATCATAGGTCA +
Preference number: 6 (lower is better)
Translates to: SHRKSSILFHRS*WPGAQCCHHRS
Trigger: TGACCTATGATGGCAACACTGGGCTCCTGGCCACCAAGAGCGATGAAACAGGATGGACGACTTTCTATGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 72 bp GCCAACAGAAGCTTGGTCACATCGGGTTGGTTCATCTaGGACAACTGCGGAAGGCCACCATCATTCTTAAAC +
Preference number: 6 (lower is better)
Translates to: ANRSLVTSGWFI*DNCGRPPSFLN
Trigger: GTTTAAGAATGATGGTGGCCTTCCGCAGTTGTCCCAGATGAACCAACCCGATGTGACCAAGCTTCTGTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517941.1
CDS CCA 72 bp TACCTGCTGTTGAAAGGGTTCTCTCCAGGAATGATGTaGGTGCTATCCTTGCCTGCCAAGAGCTTGATACGG +
Preference number: 6 (lower is better)
Translates to: YLLLKGFSPGMM*VLSLPAKSLIR
Trigger: CCGTATCAAGCTCTTGGCAGGCAAGGATAGCACCCACATCATTCCTGGAGAGAACCCTTTCAACAGCAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521126.1
CDS CAA 72 bp CCATGGACCCGGAGCTTCCTGCCAAAGATGGTGACTTaGCCTTTAATCTGTTCCTTTCTTAGGCGCCACTCA +
Preference number: 6 (lower is better)
Translates to: PWTRSFLPKMVT*PLICSFLRRHS
Trigger: TGAGTGGCGCCTAAGAAAGGAACAGATTAAAGGCAAAGTCACCATCTTTGGCAGGAAGCTCCGGGTCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 72 bp ACTGGACACTCCACCCGCTGGCCTTGTTGTAGGCTCTaGTTAGGAGGCCCTTGGAATTGTATTCGAAGATGT +
Preference number: 6 (lower is better)
Translates to: TGHSTRWPCCRL*LGGPWNCIRRC
Trigger: ACATCTTCGAATACAATTCCAAGGGCCTCCTAACAAGAGCCTACAACAAGGCCAGCGGGTGGAGTGTCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 90 bp AAAACATATAACTCCTGCTCTCCGGGGGATGCAGCCTCATACTGGTaGAAGGCATTAAGAACAGGCTTGTTCTTGCTGACCGCCCTGATC +
Preference number: 6 (lower is better)
Translates to: KTYNSCSPGDAASYW*KALRTGLFLLTALI
Trigger: GATCAGGGCGGTCAGCAAGAACAAGCCTGTTCTTAATGCCTTCAACCAGTATGAGGCTGCATCCCCCGGAGAGCAGGAGTTATATGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 90 bp GGCAAGGAGGCGGTCAGAGGAGTCATACTCAAATATATACTGACGTaGGCTCTGAAGCAGGAGGACCATGGACTTGTCAAGGTAGGAGTA +
Preference number: 6 (lower is better)
Translates to: GKEAVRGVILKYILT*ALKQEDHGLVKVGV
Trigger: TACTCCTACCTTGACAAGTCCATGGTCCTCCTGCTTCAGAGCCAACGTCAGTATATATTTGAGTATGACTCCTCTGACCGCCTCCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 90 bp GTAGGTGGAATGGGACGACCGTTCTCATCATCTGATTTGTTTTCGTaGTCAGAGTCAGTCAGGGTAAGGGCCGAGTTTTCACGACTGGAC +
Preference number: 6 (lower is better)
Translates to: VGGMGRPFSSSDLFS*SESVRVRAEFSRLD
Trigger: GTCCAGTCGTGAAAACTCGGCCCTTACCCTGACTGACTCTGACAACGAAAACAAATCAGATGATGAGAACGGTCGTCCCATTCCACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS TCA 72 bp TCTTCAAGACACCAGTGGTCTCGTCATACCCGAAGGTaGCGGCGGTACTGTCGTAGACAATCTCTGATAACT +
Preference number: 6 (lower is better)
Translates to: SSRHQWSRHTRR*RRYCRRQSLIT
Trigger: AGTTATCAGAGATTGTCTACGACAGTACCGCCGTCACCTTCGGGTATGACGAGACCACTGGTGTCTTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 72 bp TGGTGGGACTTCTTGTGTTACCCGCCGACCAACTTCTaGTTCACCACTGTCTATGCTGCTGTTTTTCAACGA +
Preference number: 6 (lower is better)
Translates to: WWDFLCYPPTNF*FTTVYAAVFQR
Trigger: TCGTTGAAAAACAGCAGCATAGACAGTGGTGAAGCAGAAGTTGGTCGGCGGGTAACACAAGAAGTCCCACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 72 bp CACACAGTGGTGGTCAGAAAGATAGGTCTTCTCCTCTaGCAACAGAAGCTTGGTCACATCGGGTTGGTTCAT +
Preference number: 6 (lower is better)
Translates to: HTVVVRKIGLLL*QQKLGHIGLVH
Trigger: ATGAACCAACCCGATGTGACCAAGCTTCTGTTGGCAGAGGAGAAGACCTATCTTTCTGACCACCACTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517941.1
CDS GCA 72 bp AGTACTTGTGTGCTGGGTTGTTGCGTAACTCCAAGATaGTGGTCACATTTCGAGAGGGAAAGATGCGTCGGA +
Preference number: 6 (lower is better)
Translates to: STCVLGCCVTPR*WSHFERERCVG
Trigger: TCCGACGCATCTTTCCCTCTCGAAATGTGACCAGCATCTTGGAGTTACGCAACAACCCAGCACACAAGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520394.5
CDS GCA 72 bp AAATCAGAGACTTCAGGAGTTTGCAGGGACAGAGGGTaGCTACCTGCTGTTGAAAGGGTTCTCTCCAGGAAT +
Preference number: 6 (lower is better)
Translates to: KSETSGVCRDRG*LPAVERVLSRN
Trigger: ATTCCTGGAGAGAACCCTTTCAACAGCAGGTAGGCACCCTCTGTCCCTGCAAACTCCTGAAGTCTCTGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521126.1
CDS CCA 72 bp CTGGAGCTACAGCTAAGGATGATGGGGAATTCAAGATaGCATCAGTCGCGTAGGCATCATCTCCTGAATAGC +
Preference number: 6 (lower is better)
Translates to: LELQLRMMGNSR*HQSRRHHLLNS
Trigger: GCTATTCAGGAGATGATGCCTACGCGACTGATGCCATCTTGAATTCCCCATCATCCTTAGCTGTAGCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 72 bp ACTTGTGTGCTGGGTTGTTGCGTAACTCCAAGATGCTaGTCACATTTCGAGAGGGAAAGATGCGTCGGATGT +
Preference number: 6 (lower is better)
Translates to: TCVLGCCVTPRC*SHFERERCVGC
Trigger: ACATCCGACGCATCTTTCCCTCTCGAAATGTGACCAGCATCTTGGAGTTACGCAACAACCCAGCACACAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520394.5
CDS CAA 72 bp GTAGGTGGAATGGGACGACCGTTCTCATCATCTGATTaGTTTTCGTTGTCAGAGTCAGTCAGGGTAAGGGCC +
Preference number: 6 (lower is better)
Translates to: VGGMGRPFSSSD*FSLSESVRVRA
Trigger: GGCCCTTACCCTGACTGACTCTGACAACGAAAACAAATCAGATGATGAGAACGGTCGTCCCATTCCACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS CAA 72 bp CAACAGGTGTCTCCAGCAGGTTCTGGGTTAAAGATGTaGACATCCTGCAAAGACACTAGGGCTCTGTTCTGG +
Preference number: 6 (lower is better)
Translates to: QQVSPAGSGLKM*TSCKDTRALFW
Trigger: CCAGAACAGAGCCCTAGTGTCTTTGCAGGATGTCAACATCTTTAACCCAGAACCTGCTGGAGACACCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521126.1
CDS CAA 90 bp AAGATAGGTCTTCTCCTCTGCCAACAGAAGCTTGGTCACATCGGGTaGGTTCATCTGGGACAACTGCGGAAGGCCACCATCATTCTTAAA +
Preference number: 6 (lower is better)
Translates to: KIGLLLCQQKLGHIG*VHLGQLRKATIILK
Trigger: TTTAAGAATGATGGTGGCCTTCCGCAGTTGTCCCAGATGAACCAACCCGATGTGACCAAGCTTCTGTTGGCAGAGGAGAAGACCTATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517941.1
CDS TCA 72 bp AATTGGGGGAGAATTCCTCATCAGGGTTGGTGTCCATaGTTTGATGGGAGGTGTTGCTGTCTAGCAATGGCA +
Preference number: 6 (lower is better)
Translates to: NWGRIPHQGWCP*FDGRCCCLAMA
Trigger: TGCCATTGCTAGACAGCAACACCTCCCATCAAATCATGGACACCAACCCTGATGAGGAATTCTCCCCCAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000517586.1
ENST00000518659.5
ENST00000519204.5
ENST00000520393.5
CDS GCA 72 bp GCCGGACACGGGGTCCACTGCCAAGTAGTACTTGTGTaGTGGGTTGTTGCTATGTTTAAACTCTTTATTTCG +
Preference number: 6 (lower is better)
Translates to: AGHGVHCQVVLV*WVVAMFKLFIS
Trigger: CGAAATAAAGAGTTTAAACATAGCAACAACCCAGCACACAAGTACTACTTGGCAGTGGACCCCGTGTCCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518659.5
ENST00000519204.5
CDS CCA 72 bp AAGTACTCCCCTGTCACCAGGCTCACAGTGTATTGGTaGATGCCATCAGCGTTGAAAACATATAACTCCTGC +
Preference number: 6 (lower is better)
Translates to: KYSPVTRLTVYW*MPSALKTYNSC
Trigger: GCAGGAGTTATATGTTTTCAACGCTGATGGCATCCACCAATACACTGTGAGCCTGGTGACAGGGGAGTACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CCA 72 bp GCCATGAAGGCCTGGTTATGTCTCTCTGTTGTCTGTTaGACACCTGTAATGAGCTGTCCATTCTCACTTGCT +
Preference number: 6 (lower is better)
Translates to: AMKAWLCLSVVC*TPVMSCPFSLA
Trigger: AGCAAGTGAGAATGGACAGCTCATTACAGGTGTCCAACAGACAACAGAGAGACATAACCAGGCCTTCATGGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 72 bp ATCATGGTGGCATCGACAAAGTACATGAGCCCATTCTaGTCTACTGCAATACCTCTCGGGCTCATCAGGGTT +
Preference number: 6 (lower is better)
Translates to: IMVASTKYMSPF*STAIPLGLIRV
Trigger: AACCCTGATGAGCCCGAGAGGTATTGCAGTAGACAAGAATGGGCTCATGTACTTTGTCGATGCCACCATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 72 bp GCAGCCTCATACTGGTTGAAGGCATTAAGAACAGGCTaGTTCTTGCTGACCGCCCTGATCCGAATATTTCCA +
Preference number: 6 (lower is better)
Translates to: AASYWLKALRTG*FLLTALIRIFP
Trigger: TGGAAATATTCGGATCAGGGCGGTCAGCAAGAACAAGCCTGTTCTTAATGCCTTCAACCAGTATGAGGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 72 bp GCGGTCAGAGGAGTCATACTCAAATATATACTGACGTaGGCTCTGAAGCAGGAGGACCATGGACTTGTCAAG +
Preference number: 6 (lower is better)
Translates to: AVRGVILKYILT*ALKQEDHGLVK
Trigger: CTTGACAAGTCCATGGTCCTCCTGCTTCAGAGCCAACGTCAGTATATATTTGAGTATGACTCCTCTGACCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 72 bp AGCCATGAAGGCCTGGTTATGTCTCTCTGTTGTCTGTaGGACACCTGTAATGAGCTGTCCATTCTCACTTGC +
Preference number: 6 (lower is better)
Translates to: SHEGLVMSLCCL*DTCNELSILTC
Trigger: GCAAGTGAGAATGGACAGCTCATTACAGGTGTCCAACAGACAACAGAGAGACATAACCAGGCCTTCATGGCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 90 bp AGATTTCTTCCATGGACCCGGAGCTTCCTGCCAAAGATGGTGACTTaGCCTTTAATCTGTTCCTTTCTTAGGCGCCACTCAATGGAGTTT +
Preference number: 6 (lower is better)
Translates to: RFLPWTRSFLPKMVT*PLICSFLRRHSMEF
Trigger: AAACTCCATTGAGTGGCGCCTAAGAAAGGAACAGATTAAAGGCAAAGTCACCATCTTTGGCAGGAAGCTCCGGGTCCATGGAAGAAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 72 bp AACTTGATCTTGTACCACTGTGTAGGAGGCCTCTACTaGAGAGAGGTTGGTGATGACAGTGACGTCATCATC +
Preference number: 6 (lower is better)
Translates to: NLILYHCVGGLY*REVGDDSDVII
Trigger: GATGATGACGTCACTGTCATCACCAACCTCTCTTCAGTAGAGGCCTCCTACACAGTGGTACAAGATCAAGTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 72 bp TCTTCAGGATGCGGCCGTCATCACTGTAGTCAAAGATaGCCGAAGCATTGCTTTCAGGCGGGTTGTAAATAT +
Preference number: 6 (lower is better)
Translates to: SSGCGRHHCSQR*PKHCFQAGCKY
Trigger: ATATTTACAACCCGCCTGAAAGCAATGCTTCGGTCATCTTTGACTACAGTGATGACGGCCGCATCCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS GCA 72 bp ACTGTTAGCGTCTGCAAATTCCAGTCTCAGGCACTCTaGAAACCACTGGAGGAGAGTTTCAAACCAAAGTCT +
Preference number: 6 (lower is better)
Translates to: TVSVCKFQSQAL*KPLEESFKPKS
Trigger: AGACTTTGGTTTGAAACTCTCCTCCAGTGGTTTGCAGAGTGCCTGAGACTGGAATTTGCAGACGCTAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522488.1
CDS CCA 72 bp TTAGTAATGACCTGTCCTTCCAGAGCCATGAAGGCCTaGTTATGTCTCTCTGTTGTCTGTTGGACACCTGTA +
Preference number: 6 (lower is better)
Translates to: LVMTCPSRAMKA*LCLSVVCWTPV
Trigger: TACAGGTGTCCAACAGACAACAGAGAGACATAACCAGGCCTTCATGGCTCTGGAAGGACAGGTCATTACTAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 72 bp TTCAAATCTAGCTCACTGCTGAGAGGATTGTTGCTCTaGAACATATACAGGTTAAAGGGGGCCGGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: FKSSSLLRGLLL*NIYRLKGAGSL
Trigger: CAAGGAGCCGGCCCCCTTTAACCTGTATATGTTCAAGAGCAACAATCCTCTCAGCAGTGAGCTAGATTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 72 bp ATGGGACGACCGTTCTCATCATCTGATTTGTTTTCGTaGTCAGAGTCAGTCAGGGTAAGGGCCGAGTTTTCA +
Preference number: 6 (lower is better)
Translates to: MGRPFSSSDLFS*SESVRVRAEFS
Trigger: TGAAAACTCGGCCCTTACCCTGACTGACTCTGACAACGAAAACAAATCAGATGATGAGAACGGTCGTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518659.5
CDS TCA 72 bp TTGGCTCTCGGGAAGCCAGGAATGATGTTGCTAAGCTaGAATCCAAACATCACAAGCCAGCTTTTCACATCT +
Preference number: 6 (lower is better)
Translates to: LALGKPGMMLLS*NPNITSQLFTS
Trigger: AGATGTGAAAAGCTGGCTTGTGATGTTTGGATTTCAGCTTAGCAACATCATTCCTGGCTTCCCGAGAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 72 bp CTCTTTCCCATCTCATTCTGTCTTAAAAACTGGATGTaGCTGCTACTGTCTGCAAGCTCTGGGTATTGCTCC +
Preference number: 6 (lower is better)
Translates to: LFPISFCLKNWM*LLLSASSGYCS
Trigger: GGAGCAATACCCAGAGCTTGCAGACAGTAGCAGCAACATCCAGTTTTTAAGACAGAATGAGATGGGAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 90 bp GCAATGATGCTGACTTGGTGGTTCTCGGTGATTCGAAGGATGACATaGTTCTCTAGAACATACAAGGAGTTATCCATGGGATTGACAGCA +
Preference number: 6 (lower is better)
Translates to: AMMLTWWFSVIRRMT*FSRTYKELSMGLTA
Trigger: TGCTGTCAATCCCATGGATAACTCCTTGTATGTTCTAGAGAACAATGTCATCCTTCGAATCACCGAGAACCACCAAGTCAGCATCATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 90 bp TCTACTGAAGAGAGGTTGGTGATGACAGTGACGTCATCATCACGGTaGGAGTTCTCAATGTCAATGGTAATAGATTTCTCCATTTCCCGG +
Preference number: 6 (lower is better)
Translates to: STEERLVMTVTSSSR*EFSMSMVIDFSISR
Trigger: CCGGGAAATGGAGAAATCTATTACCATTGACATTGAGAACTCCAACCGTGATGATGACGTCACTGTCATCACCAACCTCTCTTCAGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 72 bp CTGACTTGGTGGTTCTCGGTGATTCGAAGGATGACATaGTTCTCTAGAACATACAAGGAGTTATCCATGGGA +
Preference number: 6 (lower is better)
Translates to: LTWWFSVIRRMT*FSRTYKELSMG
Trigger: TCCCATGGATAACTCCTTGTATGTTCTAGAGAACAATGTCATCCTTCGAATCACCGAGAACCACCAAGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 72 bp GAGAGGTTGGTGATGACAGTGACGTCATCATCACGGTaGGAGTTCTCAATGTCAATGGTAATAGATTTCTCC +
Preference number: 6 (lower is better)
Translates to: ERLVMTVTSSSR*EFSMSMVIDFS
Trigger: GGAGAAATCTATTACCATTGACATTGAGAACTCCAACCGTGATGATGACGTCACTGTCATCACCAACCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 90 bp GGCATGCCACTGCTGTCCCGACGGATCTTCAGGGAATTCCCATTATaGTCAATCAATTCAGTGACATCATTGTCAGTACTATATGTGAAA +
Preference number: 6 (lower is better)
Translates to: GMPLLSRRIFREFPL*SINSVTSLSVLYVK
Trigger: TTTCACATATAGTACTGACAATGATGTCACTGAATTGATTGACAATAATGGGAATTCCCTGAAGATCCGTCGGGACAGCAGTGGCATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS TCA 72 bp TGTAATGAGCTGTCCATTCTCACTTGCTTGACTCTCTaGCAATTCATAGGGAGGAGGCACGAAATACATTTT +
Preference number: 6 (lower is better)
Translates to: CNELSILTCLTL*QFIGRRHEIHF
Trigger: AAAATGTATTTCGTGCCTCCTCCCTATGAATTGTCAGAGAGTCAAGCAAGTGAGAATGGACAGCTCATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 72 bp AATTCAGTGACATCATTGTCAGTACTATATGTGAAATaGTACAAGTACTCCCCTGTCACCAGGCTCACAGTG +
Preference number: 6 (lower is better)
Translates to: NSVTSLSVLYVK*YKYSPVTRLTV
Trigger: CACTGTGAGCCTGGTGACAGGGGAGTACTTGTACAATTTCACATATAGTACTGACAATGATGTCACTGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 90 bp TTGTCAATCAATTCAGTGACATCATTGTCAGTACTATATGTGAAATaGTACAAGTACTCCCCTGTCACCAGGCTCACAGTGTATTGGTGG +
Preference number: 6 (lower is better)
Translates to: LSINSVTSLSVLYVK*YKYSPVTRLTVYWW
Trigger: CCACCAATACACTGTGAGCCTGGTGACAGGGGAGTACTTGTACAATTTCACATATAGTACTGACAATGATGTCACTGAATTGATTGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5
CDS CAA 90 bp ATCTTCAGGGAATTCCCATTATTGTCAATCAATTCAGTGACATCATaGTCAGTACTATATGTGAAATTGTACAAGTACTCCCCTGTCACC +
Preference number: 6 (lower is better)
Translates to: IFREFPLLSINSVTS*SVLYVKLYKYSPVT
Trigger: GGTGACAGGGGAGTACTTGTACAATTTCACATATAGTACTGACAATGATGTCACTGAATTGATTGACAATAATGGGAATTCCCTGAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518659.5
ENST00000519204.5
ENST00000520394.5