RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TEKT5 (Homo sapiens)

Ensembl gene IDs: ENSG00000153060

Ensembl transcript IDs: ENST00000283025.7, ENST00000574923.1, ENST00000576638.1

Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp TGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGGGCGGTGCTCAGGTGTaGCCCACCAGGCGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: CFSAFSNFTPARNEAPGRGGAQV*PTRRGV
Trigger: CACCCCGCGCCTGGTGGGCCACACCTGAGCACCGCC...CCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp TTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGTGCGTGTGGGCAGGATGGTaGGCGGCCGCAGGGTACTGG +
Preference number: 4 (lower is better)
Translates to: FSAFSNFTPARNEAPGRCVWAGW*AAAGYW
Trigger: CCAGTACCCTGCGGCCGCCCACCATCCTGCCCACAC...GCACCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp TGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGCATCCGTCAGCCGGCTaGCCCACAGCCGGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: CFSAFSNFTPARNEAPGRHPSAG*PTAGRP
Trigger: AGGCCTCCCGGCTGTGGGCCAGCCGGCTGACGGATG...CCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR TCA 90 bp CTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGTACGCCAGCGCGGAATaGGGCGCCAGGGCGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LCFSAFSNFTPARNEAPGYASAE*GARAVL
Trigger: GAGCACCGCCCTGGCGCCTCATTCCGCGCTGGCGTA...CCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR GCA 90 bp TGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGGCCGCAGGGTACTGGTaGTCTCGTCCGGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: CFSAFSNFTPARNEAPGRAAGYW*SRPGRS
Trigger: AGACCTGCCCGGACGAGAGCACCAGTACCCTGCGGC...CCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR GCA 90 bp TGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGCCAGGTTCCGGCAGGTaGCCTCCTGCATCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: CFSAFSNFTPARNEAPGRPGSGR*PPASGA
Trigger: CGCACCAGATGCAGGAGGGCACCTGCCGGAACCTGG...CCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp TGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGGCCTCCTCCCGCAGCTaGATGGAGTTGGCCCGCATG +
Preference number: 4 (lower is better)
Translates to: CFSAFSNFTPARNEAPGRASSRS*MELARM
Trigger: CATGCGGGCCAACTCCATCCAGCTGCGGGAGGAGGC...CCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp TGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGTGCACAGCTCCATGTTaGGGCGCCGGGTCCGGCACT +
Preference number: 4 (lower is better)
Translates to: CFSAFSNFTPARNEAPGRCTAPC*GAGSGT
Trigger: AGTGCCGGACCCGGCGCCCCAACATGGAGCTGTGCA...CCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR TCA 90 bp TTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCCCCGCAGCCGCAGCTTaGGGGTCTGCAGGGTGTCGT +
Preference number: 4 (lower is better)
Translates to: FVSQPFPILRQRGMRRQGPAAAA*GSAGCR
Trigger: ACGACACCCTGCAGACCCTCAAGCTGCGGCTGCGGG...GCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR TCA 90 bp GTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGTGCCGGCACTTGGTCATaGCCAGCAGCTGCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: VSQPFPILRQRGMRRQGGAGTWS*PAAAAC
Trigger: ACACGCTGCAGCTGCTGGTCATGACCAAGTGCCGGC...ACCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp GTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGTATGTCCGACAGCCTCTaGCCCAGGTTCCGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VSQPFPILRQRGMRRQGGMSDSL*PRFRQV
Trigger: CACCTGCCGGAACCTGGGCCAGAGGCTGTCGGACAT...ACCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR TCA 90 bp GTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGTCTCCATCCTCCCTCATaGGCCCCACTCGGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: VSQPFPILRQRGMRRQGGLHPPS*APLGQN
Trigger: GTTTTGCCCGAGTGGGGCTCATGAGGGAGGATGGAG...ACCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR GCA 90 bp TGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGAAGGTCTCAAAGAGGTaGTCCGCCTCCTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: CFSAFSNFTPARNEAPGRKVSKR*SASSRS
Trigger: GCTGCGGGAGGAGGCGGAGCACCTCTTTGAGACCTT...CCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR GCA 90 bp CTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCCACCAGGCGCGGGGTaGAGGGGAAGGTCTTACGCA +
Preference number: 4 (lower is better)
Translates to: LCFSAFSNFTPARNEAPGPPGAG*RGRSYA
Trigger: TGCGTAAGACCTTCCCCTGCACCCCGCGCCTGGTGG...CCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp GTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGTTGCAGCTGGTTGGACTaGTCCCAGTCGTGGGGGCTA +
Preference number: 4 (lower is better)
Translates to: VSQPFPILRQRGMRRQGGCSWLD*SQSWGL
Trigger: TAGCCCCCACGACTGGGACCAGTCCAACCAGCTGCA...ACCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp GTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGTCCTGCAAGAGCCTCATaGAGTCATCCGTCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: VSQPFPILRQRGMRRQGGPARAS*SHPSAG
Trigger: GCCGGCTGACGGATGACTCCATGAGGCTCTTGCAGG...ACCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp GTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGTGTGCCCTCCTGCATCTaGTGCGTCAGCTGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VSQPFPILRQRGMRRQGGVPSCI*CVSWSL
Trigger: CAAGGACCAGCTGACGCACCAGATGCAGGAGGGCAC...ACCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR TCA 90 bp GTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGTACTCCAGCCGCCTCTTaGCCGTCTCCAAGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: VSQPFPILRQRGMRRQGGTPAAS*PSPSSG
Trigger: ACCAGAACTTGGAGACGGTCAAGAGGCGGCTGGAGT...ACCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR TCA 90 bp TTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCCTCTCCAGCACGTGCTaGGCATCCCGGTTATCCCGC +
Preference number: 4 (lower is better)
Translates to: FVSQPFPILRQRGMRRQGLSSTC*ASRLSR
Trigger: GCGGGATAACCGGGATGCTCAGCACGTGCTGGAGAG...GCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR TCA 90 bp TTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGTGCACCTTTCCAGCAGCATaGTGGTGTTCTCGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: FSAFSNFTPARNEAPGRCTFPAA*WCSRPG
Trigger: TCCAGGCCGAGAACACCATCATGCTGCTGGAAAGGT...GCACCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR TCA 90 bp GTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGTGGGTGTCGTCGATGGTaGACACCTCGTTCACCAGCT +
Preference number: 4 (lower is better)
Translates to: VSQPFPILRQRGMRRQGGGCRRW*TPRSPA
Trigger: AGCTGGTGAACGAGGTGTTCACCATCGACGACACCC...ACCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp TTACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGCGGCCGCAGGGTACTaGTGCTCTCGTCCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LLCFSAFSNFTPARNEAPAAAGY*CSRPGR
Trigger: CCTGCCCGGACGAGAGCACCAGTACCCTGCGGCCGC...TGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp TTACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGTGCGGAGCGCAGTGTaGGCAGGATGGTGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: LLCFSAFSNFTPARNEAPVRSAV*AGWWAA
Trigger: GGCCGCCCACCATCCTGCCCACACTGCGCTCCGCAC...TGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp TTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCCCACGCACCTGCAGCTaGTTGGACTGGTCCCAGTCG +
Preference number: 4 (lower is better)
Translates to: FVSQPFPILRQRGMRRQGPRTCS*LDWSQS
Trigger: CGACTGGGACCAGTCCAACCAGCTGCAGGTGCGTGG...GCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp TTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGTGCCAAGGCCACCTGCAATaGGCAGTTCACCTCATTGGC +
Preference number: 4 (lower is better)
Translates to: FSAFSNFTPARNEAPGRCQGHLQ*AVHLIG
Trigger: GCCAATGAGGTGAACTGCCCATTGCAGGTGGCCTTG...GCACCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR GCA 90 bp TTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGCCTGGAAGATCTCCTaGAGCGTCTTCGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FVSQPFPILRQRGMRRQGAWKIS*SVFASC
Trigger: GCAGCTGGCGAAGACGCTGCAGGAGATCTTCCAGGC...GCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp TGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGGCAGCTGGATGGAGTTaGCCCGCATGTTCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: CFSAFSNFTPARNEAPGRAAGWS*PACSES
Trigger: ACTCTCAGAACATGCGGGCCAACTCCATCCAGCTGC...CCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR TCA 90 bp CTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGGAGGCTAGGCCTCCATaGATTGAGGTAGCGGTACCC +
Preference number: 4 (lower is better)
Translates to: LCFSAFSNFTPARNEAPGEARPP*IEVAVP
Trigger: GGGTACCGCTACCTCAATTCATGGAGGCCTAGCCTC...CCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR GCA 90 bp TTACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCATCGGCCCCACGCACCTaGAGCTGGTTGGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: LLCFSAFSNFTPARNEAPSAPRT*SWLDWS
Trigger: GGACCAGTCCAACCAGCTGCAGGTGCGTGGGGCCGA...TGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR GCA 90 bp TTACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCACGGCAGGTGCCCTCCTaGATCTGGTGCGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LLCFSAFSNFTPARNEAPRQVPS*IWCVSW
Trigger: CCAGCTGACGCACCAGATGCAGGAGGGCACCTGCCG...TGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR GCA 90 bp GTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGTAGCGTCTTCGCCAGCTaGGTCTGCAGCTTATTCTTC +
Preference number: 4 (lower is better)
Translates to: VSQPFPILRQRGMRRQGGSVFAS*VCSLFF
Trigger: GAAGAATAAGCTGCAGACGCAGCTGGCGAAGACGCT...ACCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR GCA 90 bp CTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGGTCATGACCAGCAGCTaGAGCGTGTCCTGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LCFSAFSNFTPARNEAPGVMTSS*SVSCVS
Trigger: GGAGACACAGGACACGCTGCAGCTGCTGGTCATGAC...CCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR GCA 90 bp TTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGTGCTCTTACGCATGCCCATaGACTTCTCCTTGTCGATGC +
Preference number: 4 (lower is better)
Translates to: FSAFSNFTPARNEAPGRCSYACP*TSPCRC
Trigger: GCATCGACAAGGAGAAGTGCATGGGCATGCGTAAGA...GCACCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR GCA 90 bp TTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGTGCGGAAGGTCTTACGCATaGCCATGCACTTCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: FSAFSNFTPARNEAPGRCGRSYA*PCTSPC
Trigger: ACAAGGAGAAGTGCATGGGCATGCGTAAGACCTTCC...GCACCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp TGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGAGCCACAGCATTTCTTaGGACCACAGTAACTGGCGG +
Preference number: 4 (lower is better)
Translates to: CFSAFSNFTPARNEAPGRSHSIS*DHSNWR
Trigger: CCGCCAGTTACTGTGGTCCCAAGAAATGCTGTGGCT...CCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp TACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGCACCTGCAGCTGGTTaGACTGGTCCCAGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: YFVSQPFPILRQRGMRRQAPAAG*TGPSRG
Trigger: CCCACGACTGGGACCAGTCCAACCAGCTGCAGGTGC...CTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp TTACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGCAGTTCACCTCATTaGCCGCGCACTCCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: LLCFSAFSNFTPARNEAPGSSPH*PRTPAA
Trigger: GGCGGCTGGAGTGCGCGGCCAATGAGGTGAACTGCC...TGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp TTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGTGCATCCTCTTCTCTCGATaGTACAGACACTCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: FSAFSNFTPARNEAPGRCILFSR*YRHSKA
Trigger: GGCCTTGGAGTGTCTGTACCATCGAGAGAAGAGGAT...GCACCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp TTACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCACACTCCAGCCTTGTCTaGGCCACCTTCAGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: LLCFSAFSNFTPARNEAPHSSLV*ATFSGP
Trigger: GGGCCCGCTGAAGGTGGCCCAGACAAGGCTGGAGTG...TGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR TCA 90 bp TACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGCAGAGATGCGGGCGTTaGAGGCCAGGTTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: YFVSQPFPILRQRGMRRQQRCGR*RPGWCL
Trigger: CAGACACCAACCTGGCCTTCAACGCCCGCATCTCTG...CTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR TCA 90 bp TACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGAGAGGGTGTTGGCCTTaGTGGCGAGCTCGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: YFVSQPFPILRQRGMRRQRGCWP*WRARAP
Trigger: TGGAGCACGAGCTCGCCATCAAGGCCAACACCCTCT...CTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR GCA 90 bp TGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGTTCGCCAGCTGCGTCTaGAGCTTATTCTTCACATCC +
Preference number: 4 (lower is better)
Translates to: CFSAFSNFTPARNEAPGRFASCV*SLFFTS
Trigger: GGATGTGAAGAATAAGCTGCAGACGCAGCTGGCGAA...CCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR GCA 90 bp TACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGACTGCGGGATGTCCCTaGACAGCTCCATGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: YFVSQPFPILRQRGMRRQTAGCP*TAPCWG
Trigger: GCCCCAACATGGAGCTGTGCAGGGACATCCCGCAGT...CTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR GCA 90 bp CTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGTTCACCAGCTTCAACTaGGGGATGTCCCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: LCFSAFSNFTPARNEAPGFTSFN*GMSLHS
Trigger: GCTGTGCAGGGACATCCCGCAGTTGAAGCTGGTGAA...CCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR GCA 90 bp TACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGCGCAGCTTGAGGGTCTaGAGGGTGTCGTCGATGGTG +
Preference number: 4 (lower is better)
Translates to: YFVSQPFPILRQRGMRRQRSLRV*RVSSMV
Trigger: CACCATCGACGACACCCTGCAGACCCTCAAGCTGCG...CTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp TACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGCCTCCCGCAGCTGGATaGAGTTGGCCCGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: YFVSQPFPILRQRGMRRQPPAAG*SWPACS
Trigger: AGAACATGCGGGCCAACTCCATCCAGCTGCGGGAGG...CTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR TCA 90 bp CTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCCAGGTTGGTGTCTGTaGACTGCCTCCACATCTGAT +
Preference number: 4 (lower is better)
Translates to: LCFSAFSNFTPARNEAPGPGWCL*TASTSD
Trigger: ATCAGATGTGGAGGCAGTTCACAGACACCAACCTGG...CCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR TCA 90 bp TTACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGCCCTCCTTGGCCATaGTGGACCTTTCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LLCFSAFSNFTPARNEAPGPPWP*WTFPAA
Trigger: TGCTGCTGGAAAGGTCCATCATGGCCAAGGAGGGCC...TGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR GCA 90 bp CTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGAGCTGGTCCTTGTCCTaGAAGAGCCTCATGGAGTCA +
Preference number: 4 (lower is better)
Translates to: LCFSAFSNFTPARNEAPGSWSLS*KSLMES
Trigger: TGACTCCATGAGGCTCTTGCAGGACAAGGACCAGCT...CCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR GCA 90 bp TTACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCATTGATGGCGAGCTCGTaGTCCAGCCGGCACTTGGTC +
Preference number: 4 (lower is better)
Translates to: LLCFSAFSNFTPARNEAPLMASS*SSRHLV
Trigger: GACCAAGTGCCGGCTGGAGCACGAGCTCGCCATCAA...TGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp TACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGCATTCCTGGATCACTaGCGCCTGTACAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: YFVSQPFPILRQRGMRRQAFLDH*RLYSWQ
Trigger: CTGCCAGCTGTACAGGCGCCAGTGATCCAGGAATGC...CTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp CTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGGGCAGGTCTGGACGTTaGCTATCTTGTAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LCFSAFSNFTPARNEAPGGRSGR*LSCRRG
Trigger: GCCTCTTCTACAAGATAGCCAACGTCCAGACCTGCC...CCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp TGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGTTCTCATCGATACACTaGGCCGAGCTTTTGTCTTCG +
Preference number: 4 (lower is better)
Translates to: CFSAFSNFTPARNEAPGRFSSIH*AELLSS
Trigger: CGAAGACAAAAGCTCGGCCCAGTGTATCGATGAGAA...CCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR TCA 90 bp TTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCCTCATAGCTCAGCTCTaGCTTCCAGAAGCCAATGTC +
Preference number: 4 (lower is better)
Translates to: FVSQPFPILRQRGMRRQGLIAQL*LPEANV
Trigger: GACATTGGCTTCTGGAAGTCAGAGCTGAGCTATGAG...GCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp TACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGATCTGGTGCGTCAGCTaGTCCTTGTCCTGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: YFVSQPFPILRQRGMRRQIWCVS*SLSCKS
Trigger: GCTCTTGCAGGACAAGGACCAGCTGACGCACCAGAT...CTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp TTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCACCGTCTCCAAGTTCTaGTTCTCAGTCAGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: FVSQPFPILRQRGMRRQGTVSKF*FSVRSL
Trigger: CAGGCTTCTGACTGAGAACCAGAACTTGGAGACGGT...GCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp TTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGTGCTTCTCCACGTTGTCATaGACCAAATCAATCCCAATC +
Preference number: 4 (lower is better)
Translates to: FSAFSNFTPARNEAPGRCFSTLS*TKSIPI
Trigger: GATTGGGATTGATTTGGTCCATGACAACGTGGAGAA...GCACCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp TACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGATGGTGTTCTCGGCCTaGAAGATCTCCTGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: YFVSQPFPILRQRGMRRQMVFSA*KISCSV
Trigger: GACGCTGCAGGAGATCTTCCAGGCCGAGAACACCAT...CTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR GCA 90 bp TTACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCACACTCCAAGGCCACCTaGAATGGGCAGTTCACCTCA +
Preference number: 4 (lower is better)
Translates to: LLCFSAFSNFTPARNEAPHSKAT*NGQFTS
Trigger: TGAGGTGAACTGCCCATTGCAGGTGGCCTTGGAGTG...TGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR TCA 90 bp TTACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCACTGTACAGCTGGCAGTaGGGTCAAGCCACAGCATTT +
Preference number: 4 (lower is better)
Translates to: LLCFSAFSNFTPARNEAPLYSWQ*GQATAF
Trigger: AAATGCTGTGGCTTGACCTCACTGCCAGCTGTACAG...TGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR TCA 90 bp TACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGTGCCGTGGAAGAAGCTaGTGCAGTCTGACGTATTTC +
Preference number: 4 (lower is better)
Translates to: YFVSQPFPILRQRGMRRQCRGRS*CSLTYF
Trigger: GAAATACGTCAGACTGCATCAGCTTCTTCCACGGCA...CTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR TCA 90 bp TTACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCATTGGCCCGCATGTTCTaGGAGTGTTTGATGTTGTCG +
Preference number: 4 (lower is better)
Translates to: LLCFSAFSNFTPARNEAPLARMF*ECLMLS
Trigger: CGACAACATCAAACACTCTCAGAACATGCGGGCCAA...TGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp TACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGATTTTCTCCATGCCGTaGAAGAAGCTGATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: YFVSQPFPILRQRGMRRQIFSMP*KKLMQS
Trigger: AGACTGCATCAGCTTCTTCCACGGCATGGAGAAAAT...CTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR TCA 90 bp TACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGAAGCTGATGCAGTCTaGCGTATTTCTCAGGTTAAA +
Preference number: 4 (lower is better)
Translates to: YFVSQPFPILRQRGMRRQEADAV*RISQVK
Trigger: TTTAACCTGAGAAATACGTCAGACTGCATCAGCTTC...CTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CCA 90 bp TTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCTTTCTCATCTGTTCTTaGCAACATTTTAGCAAATCC +
Preference number: 4 (lower is better)
Translates to: FVSQPFPILRQRGMRRQGFLICS*QHFSKS
Trigger: GGATTTGCTAAAATGTTGCCAAGAACAGATGAGAAA...GCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS CCA 90 bp TGGCCCACAGCCGGGAGGCCTCGGCCCCACGCACCTGCAGCTGGTTaGACTGGTCCCAGTCGTGGGGGCTATAGCGAGAGAAGAGTGCGG +
Preference number: 5 (lower is better)
Translates to: WPTAGRPRPHAPAAG*TGPSRGGYSERRVR
Trigger: CCGCACTCTTCTCTCGCTATAGCCCCCACGACTGGGACCAGTCCAACCAGCTGCAGGTGCGTGGGGCCGAGGCCTCCCGGCTGTGGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS CCA 90 bp CCTGCATCTGGTGCGTCAGCTGGTCCTTGTCCTGCAAGAGCCTCATaGAGTCATCCGTCAGCCGGCTGGCCCACAGCCGGGAGGCCTCGG +
Preference number: 5 (lower is better)
Translates to: PASGASAGPCPARAS*SHPSAGWPTAGRPR
Trigger: CCGAGGCCTCCCGGCTGTGGGCCAGCCGGCTGACGGATGACTCCATGAGGCTCTTGCAGGACAAGGACCAGCTGACGCACCAGATGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS GCA 90 bp CGGCAGGTGCCCTCCTGCATCTGGTGCGTCAGCTGGTCCTTGTCCTaGAAGAGCCTCATGGAGTCATCCGTCAGCCGGCTGGCCCACAGC +
Preference number: 5 (lower is better)
Translates to: RQVPSCIWCVSWSLS*KSLMESSVSRLAHS
Trigger: GCTGTGGGCCAGCCGGCTGACGGATGACTCCATGAGGCTCTTGCAGGACAAGGACCAGCTGACGCACCAGATGCAGGAGGGCACCTGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS GCA 90 bp ATGGCGAGCTCGTGCTCCAGCCGGCACTTGGTCATGACCAGCAGCTaGAGCGTGTCCTGTGTCTCCCGCAGCCGCAGCTTGAGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: MASSCSSRHLVMTSS*SVSCVSRSRSLRVC
Trigger: GCAGACCCTCAAGCTGCGGCTGCGGGAGACACAGGACACGCTGCAGCTGCTGGTCATGACCAAGTGCCGGCTGGAGCACGAGCTCGCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000574923.1
CDS CCA 90 bp TGGCCCAGGTTCCGGCAGGTGCCCTCCTGCATCTGGTGCGTCAGCTaGTCCTTGTCCTGCAAGAGCCTCATGGAGTCATCCGTCAGCCGG +
Preference number: 5 (lower is better)
Translates to: WPRFRQVPSCIWCVS*SLSCKSLMESSVSR
Trigger: CCGGCTGACGGATGACTCCATGAGGCTCTTGCAGGACAAGGACCAGCTGACGCACCAGATGCAGGAGGGCACCTGCCGGAACCTGGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS CCA 90 bp CGTTCACCAGCTTCAACTGCGGGATGTCCCTGCACAGCTCCATGTTaGGGCGCCGGGTCCGGCACTCCAGCCTTGTCTGGGCCACCTTCA +
Preference number: 5 (lower is better)
Translates to: RSPASTAGCPCTAPC*GAGSGTPALSGPPS
Trigger: TGAAGGTGGCCCAGACAAGGCTGGAGTGCCGGACCCGGCGCCCCAACATGGAGCTGTGCAGGGACATCCCGCAGTTGAAGCTGGTGAACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000574923.1
CDS GCA 90 bp GACAGCCTCTGGCCCAGGTTCCGGCAGGTGCCCTCCTGCATCTGGTaGGTCAGCTGGTCCTTGTCCTGCAAGAGCCTCATGGAGTCATCC +
Preference number: 5 (lower is better)
Translates to: DSLWPRFRQVPSCIW*VSWSLSCKSLMESS
Trigger: GGATGACTCCATGAGGCTCTTGCAGGACAAGGACCAGCTGACGCACCAGATGCAGGAGGGCACCTGCCGGAACCTGGGCCAGAGGCTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS GCA 90 bp CCAATGTCCGACAGCCTCTGGCCCAGGTTCCGGCAGGTGCCCTCCTaGATCTGGTGCGTCAGCTGGTCCTTGTCCTGCAAGAGCCTCATG +
Preference number: 5 (lower is better)
Translates to: PMSDSLWPRFRQVPS*IWCVSWSLSCKSLM
Trigger: CATGAGGCTCTTGCAGGACAAGGACCAGCTGACGCACCAGATGCAGGAGGGCACCTGCCGGAACCTGGGCCAGAGGCTGTCGGACATTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS CCA 90 bp TCCGACAGCCTCTGGCCCAGGTTCCGGCAGGTGCCCTCCTGCATCTaGTGCGTCAGCTGGTCCTTGTCCTGCAAGAGCCTCATGGAGTCA +
Preference number: 5 (lower is better)
Translates to: SDSLWPRFRQVPSCI*CVSWSLSCKSLMES
Trigger: TGACTCCATGAGGCTCTTGCAGGACAAGGACCAGCTGACGCACCAGATGCAGGAGGGCACCTGCCGGAACCTGGGCCAGAGGCTGTCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS GCA 90 bp TCCAGAAGCCAATGTCCGACAGCCTCTGGCCCAGGTTCCGGCAGGTaGCCTCCTGCATCTGGTGCGTCAGCTGGTCCTTGTCCTGCAAGA +
Preference number: 5 (lower is better)
Translates to: SRSQCPTASGPGSGR*PPASGASAGPCPAR
Trigger: TCTTGCAGGACAAGGACCAGCTGACGCACCAGATGCAGGAGGGCACCTGCCGGAACCTGGGCCAGAGGCTGTCGGACATTGGCTTCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CAA 90 bp TGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGGGGCAGTTCACCTCATaGGCCGCGCACTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: CFSAFSNFTPARNEAPGRGQFTS*AAHSSR
Trigger: GCGGCTGGAGTGCGCGGCCAATGAGGTGAACTGCCC...CCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CAA 90 bp TTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGTGCTCCGGCACTCCAGCCTaGTCTGGGCCACCTTCAGCG +
Preference number: 5 (lower is better)
Translates to: FSAFSNFTPARNEAPGRCSGTPA*SGPPSA
Trigger: CGCTGAAGGTGGCCCAGACAAGGCTGGAGTGCCGGA...GCACCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS GCA 90 bp AGCTGCAGCGTGTCCTGTGTCTCCCGCAGCCGCAGCTTGAGGGTCTaGAGGGTGTCGTCGATGGTGAACACCTCGTTCACCAGCTTCAAC +
Preference number: 5 (lower is better)
Translates to: SCSVSCVSRSRSLRV*RVSSMVNTSFTSFN
Trigger: GTTGAAGCTGGTGAACGAGGTGTTCACCATCGACGACACCCTGCAGACCCTCAAGCTGCGGCTGCGGGAGACACAGGACACGCTGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000574923.1
CDS GCA 90 bp TTCTCCTTGTCGATGCAGAGGGTGTTGGCCTTGATGGCGAGCTCGTaGTCCAGCCGGCACTTGGTCATGACCAGCAGCTGCAGCGTGTCC +
Preference number: 5 (lower is better)
Translates to: FSLSMQRVLALMASS*SSRHLVMTSSCSVS
Trigger: GGACACGCTGCAGCTGCTGGTCATGACCAAGTGCCGGCTGGAGCACGAGCTCGCCATCAAGGCCAACACCCTCTGCATCGACAAGGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000574923.1
CDS-3UTR CAA 90 bp GTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGTCACTGGGCCGAGCTTTaGTCTTCGAGGTCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: VSQPFPILRQRGMRRQGGHWAEL*SSRSLS
Trigger: GGAGAGGGACCTCGAAGACAAAAGCTCGGCCCAGTG...ACCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CAA 90 bp TGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGTCAGAGATGCGGGCGTaGAAGGCCAGGTTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: CFSAFSNFTPARNEAPGRSEMRA*KARLVS
Trigger: AGACACCAACCTGGCCTTCAACGCCCGCATCTCTGA...CCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CAA 90 bp TTACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCACTGCACAGCTCCATGTaGGGGCGCCGGGTCCGGCAC +
Preference number: 5 (lower is better)
Translates to: LLCFSAFSNFTPARNEAPLHSSM*GRRVRH
Trigger: GTGCCGGACCCGGCGCCCCAACATGGAGCTGTGCAG...TGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CAA 90 bp CTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGTGCTCCAGCCGGCACTaGGTCATGACCAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LCFSAFSNFTPARNEAPGCSSRH*VMTSSC
Trigger: GCAGCTGCTGGTCATGACCAAGTGCCGGCTGGAGCA...CCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS TCA 90 bp GGGCTGATAGCATTCCTGGATCACTGGCGCCTGTACAGCTGGCAGTaGGGTCAAGCCACAGCATTTCTTGGGACCACAGTAACTGGCGGT +
Preference number: 5 (lower is better)
Translates to: GLIAFLDHWRLYSWQ*GQATAFLGTTVTGG
Trigger: ACCGCCAGTTACTGTGGTCCCAAGAAATGCTGTGGCTTGACCTCACTGCCAGCTGTACAGGCGCCAGTGATCCAGGAATGCTATCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS TCA 90 bp GTTCTGGTTCTCAGTCAGAAGCCTGTCCAGCTCATAGCTCAGCTCTaGCTTCCAGAAGCCAATGTCCGACAGCCTCTGGCCCAGGTTCCG +
Preference number: 5 (lower is better)
Translates to: VLVLSQKPVQLIAQL*LPEANVRQPLAQVP
Trigger: CGGAACCTGGGCCAGAGGCTGTCGGACATTGGCTTCTGGAAGTCAGAGCTGAGCTATGAGCTGGACAGGCTTCTGACTGAGAACCAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS TCA 90 bp TGCTCCGCCTCCTCCCGCAGCTGGATGGAGTTGGCCCGCATGTTCTaGGAGTGTTTGATGTTGTCGTTACTGAACTTGGCCCAGGTCTCA +
Preference number: 5 (lower is better)
Translates to: CSASSRSWMELARMF*ECLMLSLLNLAQVS
Trigger: TGAGACCTGGGCCAAGTTCAGTAACGACAACATCAAACACTCTCAGAACATGCGGGCCAACTCCATCCAGCTGCGGGAGGAGGCGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000576638.1
CDS-3UTR CAA 90 bp TACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGCGCACCTGCAGCTGGTaGGACTGGTCCCAGTCGTGG +
Preference number: 5 (lower is better)
Translates to: YFVSQPFPILRQRGMRRQRTCSW*DWSQSW
Trigger: CCACGACTGGGACCAGTCCAACCAGCTGCAGGTGCG...CTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CAA 90 bp TTACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCATCCCGCAGCCGCAGCTaGAGGGTCTGCAGGGTGTCG +
Preference number: 5 (lower is better)
Translates to: LLCFSAFSNFTPARNEAPSRSRS*RVCRVS
Trigger: CGACACCCTGCAGACCCTCAAGCTGCGGCTGCGGGA...TGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS TCA 90 bp GTAACTGGCGGTCTGAGTAGTCCCAAGAAACTCCATCCTCCCTCATaGGCCCCACTCGGGCAAAACTCAGCTCAAGGAGCCAAAGGCATC +
Preference number: 5 (lower is better)
Translates to: VTGGLSSPKKLHPPS*APLGQNSAQGAKGI
Trigger: GATGCCTTTGGCTCCTTGAGCTGAGTTTTGCCCGAGTGGGGCTCATGAGGGAGGATGGAGTTTCTTGGGACTACTCAGACCGCCAGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS TCA 90 bp GCAGGTCTGGACGTTGGCTATCTTGTAGAAGAGGCTAGGCCTCCATaGATTGAGGTAGCGGTACCCGGGCAGGTAGTAGGGCTGATAGCA +
Preference number: 5 (lower is better)
Translates to: AGLDVGYLVEEARPP*IEVAVPGQVVGLIA
Trigger: TGCTATCAGCCCTACTACCTGCCCGGGTACCGCTACCTCAATTCATGGAGGCCTAGCCTCTTCTACAAGATAGCCAACGTCCAGACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CAA 90 bp TACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGCAGAGGGTGTTGGCCTaGATGGCGAGCTCGTGCTCC +
Preference number: 5 (lower is better)
Translates to: YFVSQPFPILRQRGMRRQQRVLA*MASSCS
Trigger: GGAGCACGAGCTCGCCATCAAGGCCAACACCCTCTG...CTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS TCA 90 bp GATGGTGTTCTCGGCCTGGAAGATCTCCTGCAGCGTAGTTCCACATaGCTAGGAAGGCCTTACAATCATGGTGGAAGGCAGAGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: DGVLGLEDLLQRSST*LGRPYNHGGRQRRS
Trigger: GCTCCTCCTCTGCCTTCCACCATGATTGTAAGGCCTTCCTAGTCATGTGGAACTACGCTGCAGGAGATCTTCCAGGCCGAGAACACCATC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574923.1
CDS-3UTR CAA 90 bp TACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGTTCAGCGGGCCCTCCTaGGCCATGATGGACCTTTCC +
Preference number: 5 (lower is better)
Translates to: YFVSQPFPILRQRGMRRQFSGPS*AMMDLS
Trigger: GGAAAGGTCCATCATGGCCAAGGAGGGCCCGCTGAA...CTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CAA 90 bp TACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGTCGATGCAGAGGGTGTaGGCCTTGATGGCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: YFVSQPFPILRQRGMRRQSMQRV*ALMASS
Trigger: CGAGCTCGCCATCAAGGCCAACACCCTCTGCATCGA...CTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CAA 90 bp TTACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCACACTCCAGCCGCCTCTaGACCGTCTCCAAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: LLCFSAFSNFTPARNEAPHSSRL*TVSKFW
Trigger: CCAGAACTTGGAGACGGTCAAGAGGCGGCTGGAGTG...TGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CAA 90 bp TTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCTTGTCGTTACTGAACTaGGCCCAGGTCTCAGGTACG +
Preference number: 5 (lower is better)
Translates to: FVSQPFPILRQRGMRRQGLSLLN*AQVSGT
Trigger: CGTACCTGAGACCTGGGCCAAGTTCAGTAACGACAA...GCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CAA 90 bp TTACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCATGCGTCAGCTGGTCCTaGTCCTGCAAGAGCCTCATG +
Preference number: 5 (lower is better)
Translates to: LLCFSAFSNFTPARNEAPCVSWS*SCKSLM
Trigger: CATGAGGCTCTTGCAGGACAAGGACCAGCTGACGCA...TGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CAA 90 bp TACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAGCCCATGCACTTCTCCTaGTCGATGCAGAGGGTGTTG +
Preference number: 5 (lower is better)
Translates to: YFVSQPFPILRQRGMRRQPMHFS*SMQRVL
Trigger: CAACACCCTCTGCATCGACAAGGAGAAGTGCATGGG...CTGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS-3UTR CAA 90 bp TTACTTTGTTTCTCAGCCTTTTCCAATTTTACGCCAGCGCGGAATGAGGCGCCAAGGTTTTTCTCCACGTaGTCATGGACCAAATCAATC +
Preference number: 5 (lower is better)
Translates to: LLCFSAFSNFTPARNEAPRFFST*SWTKSI
Trigger: GATTGATTTGGTCCATGACAACGTGGAGAAAAACCT...TGGCGCCTCATTCCGCGCTGGCGTAAAATTGGAAAAGGCTGAGAAACAAAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS CCA 90 bp TTTAGCAAATCCACTTCCCGGATAAGGTTTTTCTCCACGTTGTCATaGACCAAATCAATCCCAATCCTCTTCTCTCGATGGTACAGACAC +
Preference number: 5 (lower is better)
Translates to: FSKSTSRIRFFSTLS*TKSIPILFSRWYRH
Trigger: GTGTCTGTACCATCGAGAGAAGAGGATTGGGATTGATTTGGTCCATGACAACGTGGAGAAAAACCTTATCCGGGAAGTGGATTTGCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000576638.1
CDS CCA 72 bp CCTGCAAGAGCCTCATGGAGTCATCCGTCAGCCGGCTaGCCCACAGCCGGGAGGCCTCGGCCCCACGCACCT +
Preference number: 6 (lower is better)
Translates to: PARASWSHPSAG*PTAGRPRPHAP
Trigger: AGGTGCGTGGGGCCGAGGCCTCCCGGCTGTGGGCCAGCCGGCTGACGGATGACTCCATGAGGCTCTTGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS CCA 72 bp CAGCGCGGAATGAGGCGCCAGGGCGGTGCTCAGGTGTaGCCCACCAGGCGCGGGGTGCAGGGGAAGGTCTTA +
Preference number: 6 (lower is better)
Translates to: QRGMRRQGGAQV*PTRRGVQGKVL
Trigger: TAAGACCTTCCCCTGCACCCCGCGCCTGGTGGGCCACACCTGAGCACCGCCCTGGCGCCTCATTCCGCGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000574923.1
CDS CAA 72 bp GCTCCATGTTGGGGCGCCGGGTCCGGCACTCCAGCCTaGTCTGGGCCACCTTCAGCGGGCCCTCCTTGGCCA +
Preference number: 6 (lower is better)
Translates to: APCWGAGSGTPA*SGPPSAGPPWP
Trigger: TGGCCAAGGAGGGCCCGCTGAAGGTGGCCCAGACAAGGCTGGAGTGCCGGACCCGGCGCCCCAACATGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283025.7
ENST00000574923.1
ENST00000576638.1
CDS GCA 72 bp AATTTTACGCCAGCGCGGAATGAGGCGCCAGGGCGGTaGTCAGGTGTGGCCCACCAGGCGCGGGGTGCAGGG +
Preference number: 6 (lower is better)
Translates to: NFTPARNEAPGR*SGVAHQARGAG
Trigger: CCCTGCACCCCGCGCCTGGTGGGCCACACCTGAGCACCGCCCTGGCGCCTCATTCCGCGCTGGCGTAAAATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000574923.1
CDS CCA 72 bp GGGGGCTATAGCGAGAGAAGAGTGCGGAGCGCAGTGTaGGCAGGATGGTGGGCGGCCGCAGGGTACTGGTGC +
Preference number: 6 (lower is better)
Translates to: GGYSERRVRSAV*AGWWAAAGYWC
Trigger: GCACCAGTACCCTGCGGCCGCCCACCATCCTGCCCACACTGCGCTCCGCACTCTTCTCTCGCTATAGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS CCA 72 bp ATGTTGGGGCGCCGGGTCCGGCACTCCAGCCTTGTCTaGGCCACCTTCAGCGGGCCCTCCTTGGCCATGATG +
Preference number: 6 (lower is better)
Translates to: MLGRRVRHSSLV*ATFSGPSLAMM
Trigger: CATCATGGCCAAGGAGGGCCCGCTGAAGGTGGCCCAGACAAGGCTGGAGTGCCGGACCCGGCGCCCCAACAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283025.7
ENST00000574923.1
ENST00000576638.1
CDS CCA 72 bp GGTGCGTCAGCTGGTCCTTGTCCTGCAAGAGCCTCATaGAGTCATCCGTCAGCCGGCTGGCCCACAGCCGGG +
Preference number: 6 (lower is better)
Translates to: GASAGPCPARAS*SHPSAGWPTAG
Trigger: CCCGGCTGTGGGCCAGCCGGCTGACGGATGACTCCATGAGGCTCTTGCAGGACAAGGACCAGCTGACGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS CCA 72 bp GCTTCAACTGCGGGATGTCCCTGCACAGCTCCATGTTaGGGCGCCGGGTCCGGCACTCCAGCCTTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: ASTAGCPCTAPC*GAGSGTPALSG
Trigger: CCCAGACAAGGCTGGAGTGCCGGACCCGGCGCCCCAACATGGAGCTGTGCAGGGACATCCCGCAGTTGAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000574923.1
CDS CCA 72 bp CTCTGGCCCAGGTTCCGGCAGGTGCCCTCCTGCATCTaGTGCGTCAGCTGGTCCTTGTCCTGCAAGAGCCTC +
Preference number: 6 (lower is better)
Translates to: LWPRFRQVPSCI*CVSWSLSCKSL
Trigger: GAGGCTCTTGCAGGACAAGGACCAGCTGACGCACCAGATGCAGGAGGGCACCTGCCGGAACCTGGGCCAGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS CAA 72 bp AGCTTCAACTGCGGGATGTCCCTGCACAGCTCCATGTaGGGGCGCCGGGTCCGGCACTCCAGCCTTGTCTGG +
Preference number: 6 (lower is better)
Translates to: SFNCGMSLHSSM*GRRVRHSSLVW
Trigger: CCAGACAAGGCTGGAGTGCCGGACCCGGCGCCCCAACATGGAGCTGTGCAGGGACATCCCGCAGTTGAAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000574923.1
CDS CAA 90 bp AGGTTCCGGCAGGTGCCCTCCTGCATCTGGTGCGTCAGCTGGTCCTaGTCCTGCAAGAGCCTCATGGAGTCATCCGTCAGCCGGCTGGCC +
Preference number: 6 (lower is better)
Translates to: RFRQVPSCIWCVSWS*SCKSLMESSVSRLA
Trigger: GGCCAGCCGGCTGACGGATGACTCCATGAGGCTCTTGCAGGACAAGGACCAGCTGACGCACCAGATGCAGGAGGGCACCTGCCGGAACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS CAA 90 bp TCGTTCACCAGCTTCAACTGCGGGATGTCCCTGCACAGCTCCATGTaGGGGCGCCGGGTCCGGCACTCCAGCCTTGTCTGGGCCACCTTC +
Preference number: 6 (lower is better)
Translates to: SFTSFNCGMSLHSSM*GRRVRHSSLVWATF
Trigger: GAAGGTGGCCCAGACAAGGCTGGAGTGCCGGACCCGGCGCCCCAACATGGAGCTGTGCAGGGACATCCCGCAGTTGAAGCTGGTGAACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000574923.1
CDS CAA 90 bp CAGAGGGTGTTGGCCTTGATGGCGAGCTCGTGCTCCAGCCGGCACTaGGTCATGACCAGCAGCTGCAGCGTGTCCTGTGTCTCCCGCAGC +
Preference number: 6 (lower is better)
Translates to: QRVLALMASSCSSRH*VMTSSCSVSCVSRS
Trigger: GCTGCGGGAGACACAGGACACGCTGCAGCTGCTGGTCATGACCAAGTGCCGGCTGGAGCACGAGCTCGCCATCAAGGCCAACACCCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000574923.1
CDS GCA 72 bp CAATGTCCGACAGCCTCTGGCCCAGGTTCCGGCAGGTaGCCTCCTGCATCTGGTGCGTCAGCTGGTCCTTGT +
Preference number: 6 (lower is better)
Translates to: QCPTASGPGSGR*PPASGASAGPC
Trigger: ACAAGGACCAGCTGACGCACCAGATGCAGGAGGGCACCTGCCGGAACCTGGGCCAGAGGCTGTCGGACATTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS GCA 72 bp ACACCTCGTTCACCAGCTTCAACTGCGGGATGTCCCTaGACAGCTCCATGTTGGGGCGCCGGGTCCGGCACT +
Preference number: 6 (lower is better)
Translates to: TPRSPASTAGCP*TAPCWGAGSGT
Trigger: AGTGCCGGACCCGGCGCCCCAACATGGAGCTGTGCAGGGACATCCCGCAGTTGAAGCTGGTGAACGAGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000574923.1
CDS CAA 72 bp CACTCCAAGGCCACCTGCAATGGGCAGTTCACCTCATaGGCCGCGCACTCCAGCCGCCTCTTGACCGTCTCC +
Preference number: 6 (lower is better)
Translates to: HSKATCNGQFTS*AAHSSRLLTVS
Trigger: GGAGACGGTCAAGAGGCGGCTGGAGTGCGCGGCCAATGAGGTGAACTGCCCATTGCAGGTGGCCTTGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS CAA 90 bp GTCCGGCACTCCAGCCTTGTCTGGGCCACCTTCAGCGGGCCCTCCTaGGCCATGATGGACCTTTCCAGCAGCATGATGGTGTTCTCGGCC +
Preference number: 6 (lower is better)
Translates to: VRHSSLVWATFSGPS*AMMDLSSSMMVFSA
Trigger: GGCCGAGAACACCATCATGCTGCTGGAAAGGTCCATCATGGCCAAGGAGGGCCCGCTGAAGGTGGCCCAGACAAGGCTGGAGTGCCGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283025.7
ENST00000574923.1
ENST00000576638.1
CDS CAA 90 bp ATGACCAGCAGCTGCAGCGTGTCCTGTGTCTCCCGCAGCCGCAGCTaGAGGGTCTGCAGGGTGTCGTCGATGGTGAACACCTCGTTCACC +
Preference number: 6 (lower is better)
Translates to: MTSSCSVSCVSRSRS*RVCRVSSMVNTSFT
Trigger: GGTGAACGAGGTGTTCACCATCGACGACACCCTGCAGACCCTCAAGCTGCGGCTGCGGGAGACACAGGACACGCTGCAGCTGCTGGTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000574923.1
CDS CAA 90 bp CGCGGGGTGCAGGGGAAGGTCTTACGCATGCCCATGCACTTCTCCTaGTCGATGCAGAGGGTGTTGGCCTTGATGGCGAGCTCGTGCTCC +
Preference number: 6 (lower is better)
Translates to: RGVQGKVLRMPMHFS*SMQRVLALMASSCS
Trigger: GGAGCACGAGCTCGCCATCAAGGCCAACACCCTCTGCATCGACAAGGAGAAGTGCATGGGCATGCGTAAGACCTTCCCCTGCACCCCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000574923.1
CDS GCA 72 bp CCCTCCTGCATCTGGTGCGTCAGCTGGTCCTTGTCCTaGAAGAGCCTCATGGAGTCATCCGTCAGCCGGCTG +
Preference number: 6 (lower is better)
Translates to: PSCIWCVSWSLS*KSLMESSVSRL
Trigger: CAGCCGGCTGACGGATGACTCCATGAGGCTCTTGCAGGACAAGGACCAGCTGACGCACCAGATGCAGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS GCA 72 bp GTGTCCTGTGTCTCCCGCAGCCGCAGCTTGAGGGTCTaGAGGGTGTCGTCGATGGTGAACACCTCGTTCACC +
Preference number: 6 (lower is better)
Translates to: VSCVSRSRSLRV*RVSSMVNTSFT
Trigger: GGTGAACGAGGTGTTCACCATCGACGACACCCTGCAGACCCTCAAGCTGCGGCTGCGGGAGACACAGGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000574923.1
CDS GCA 72 bp GGCGCGGGGTGCAGGGGAAGGTCTTACGCATGCCCATaGACTTCTCCTTGTCGATGCAGAGGGTGTTGGCCT +
Preference number: 6 (lower is better)
Translates to: GAGCRGRSYACP*TSPCRCRGCWP
Trigger: AGGCCAACACCCTCTGCATCGACAAGGAGAAGTGCATGGGCATGCGTAAGACCTTCCCCTGCACCCCGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000574923.1
CDS GCA 72 bp CCACCAGGCGCGGGGTGCAGGGGAAGGTCTTACGCATaGCCATGCACTTCTCCTTGTCGATGCAGAGGGTGT +
Preference number: 6 (lower is better)
Translates to: PPGAGCRGRSYA*PCTSPCRCRGC
Trigger: ACACCCTCTGCATCGACAAGGAGAAGTGCATGGGCATGCGTAAGACCTTCCCCTGCACCCCGCGCCTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000574923.1
CDS CCA 72 bp AGCTCTGACTTCCAGAAGCCAATGTCCGACAGCCTCTaGCCCAGGTTCCGGCAGGTGCCCTCCTGCATCTGG +
Preference number: 6 (lower is better)
Translates to: SSDFQKPMSDSL*PRFRQVPSCIW
Trigger: CCAGATGCAGGAGGGCACCTGCCGGAACCTGGGCCAGAGGCTGTCGGACATTGGCTTCTGGAAGTCAGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS CAA 72 bp TTGGCCTTGATGGCGAGCTCGTGCTCCAGCCGGCACTaGGTCATGACCAGCAGCTGCAGCGTGTCCTGTGTC +
Preference number: 6 (lower is better)
Translates to: LALMASSCSSRH*VMTSSCSVSCV
Trigger: GACACAGGACACGCTGCAGCTGCTGGTCATGACCAAGTGCCGGCTGGAGCACGAGCTCGCCATCAAGGCCAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000574923.1
CDS CAA 90 bp CGCATGCCCATGCACTTCTCCTTGTCGATGCAGAGGGTGTTGGCCTaGATGGCGAGCTCGTGCTCCAGCCGGCACTTGGTCATGACCAGC +
Preference number: 6 (lower is better)
Translates to: RMPMHFSLSMQRVLA*MASSCSSRHLVMTS
Trigger: GCTGGTCATGACCAAGTGCCGGCTGGAGCACGAGCTCGCCATCAAGGCCAACACCCTCTGCATCGACAAGGAGAAGTGCATGGGCATGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000574923.1
CDS CAA 72 bp TCCAGCCTTGTCTGGGCCACCTTCAGCGGGCCCTCCTaGGCCATGATGGACCTTTCCAGCAGCATGATGGTG +
Preference number: 6 (lower is better)
Translates to: SSLVWATFSGPS*AMMDLSSSMMV
Trigger: CACCATCATGCTGCTGGAAAGGTCCATCATGGCCAAGGAGGGCCCGCTGAAGGTGGCCCAGACAAGGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283025.7
ENST00000574923.1
ENST00000576638.1
CDS CAA 72 bp ATGCCCATGCACTTCTCCTTGTCGATGCAGAGGGTGTaGGCCTTGATGGCGAGCTCGTGCTCCAGCCGGCAC +
Preference number: 6 (lower is better)
Translates to: MPMHFSLSMQRV*ALMASSCSSRH
Trigger: GTGCCGGCTGGAGCACGAGCTCGCCATCAAGGCCAACACCCTCTGCATCGACAAGGAGAAGTGCATGGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000574923.1
CDS CAA 72 bp ATGCACTTCTCCTTGTCGATGCAGAGGGTGTTGGCCTaGATGGCGAGCTCGTGCTCCAGCCGGCACTTGGTC +
Preference number: 6 (lower is better)
Translates to: MHFSLSMQRVLA*MASSCSSRHLV
Trigger: GACCAAGTGCCGGCTGGAGCACGAGCTCGCCATCAAGGCCAACACCCTCTGCATCGACAAGGAGAAGTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000574923.1
CDS CAA 90 bp TGCAATGGGCAGTTCACCTCATTGGCCGCGCACTCCAGCCGCCTCTaGACCGTCTCCAAGTTCTGGTTCTCAGTCAGAAGCCTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: CNGQFTSLAAHSSRL*TVSKFWFSVRSLSS
Trigger: GCTGGACAGGCTTCTGACTGAGAACCAGAACTTGGAGACGGTCAAGAGGCGGCTGGAGTGCGCGGCCAATGAGGTGAACTGCCCATTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS CAA 90 bp GTCTTACGCATGCCCATGCACTTCTCCTTGTCGATGCAGAGGGTGTaGGCCTTGATGGCGAGCTCGTGCTCCAGCCGGCACTTGGTCATG +
Preference number: 6 (lower is better)
Translates to: VLRMPMHFSLSMQRV*ALMASSCSSRHLVM
Trigger: CATGACCAAGTGCCGGCTGGAGCACGAGCTCGCCATCAAGGCCAACACCCTCTGCATCGACAAGGAGAAGTGCATGGGCATGCGTAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000574923.1
CDS CCA 72 bp ATGGACCTTTCCAGCAGCATGATGGTGTTCTCGGCCTaGAAGATCTCCTGCAGCGTCTTCGCCAGCTGCGTC +
Preference number: 6 (lower is better)
Translates to: MDLSSSMMVFSA*KISCSVFASCV
Trigger: GACGCAGCTGGCGAAGACGCTGCAGGAGATCTTCCAGGCCGAGAACACCATCATGCTGCTGGAAAGGTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000576638.1
CDS CAA 72 bp CAGTTCACCTCATTGGCCGCGCACTCCAGCCGCCTCTaGACCGTCTCCAAGTTCTGGTTCTCAGTCAGAAGC +
Preference number: 6 (lower is better)
Translates to: QFTSLAAHSSRL*TVSKFWFSVRS
Trigger: GCTTCTGACTGAGAACCAGAACTTGGAGACGGTCAAGAGGCGGCTGGAGTGCGCGGCCAATGAGGTGAACTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS CAA 72 bp CAGGGGAAGGTCTTACGCATGCCCATGCACTTCTCCTaGTCGATGCAGAGGGTGTTGGCCTTGATGGCGAGC +
Preference number: 6 (lower is better)
Translates to: QGKVLRMPMHFS*SMQRVLALMAS
Trigger: GCTCGCCATCAAGGCCAACACCCTCTGCATCGACAAGGAGAAGTGCATGGGCATGCGTAAGACCTTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000574923.1
CDS TCA 72 bp GGTCTGAGTAGTCCCAAGAAACTCCATCCTCCCTCATaGGCCCCACTCGGGCAAAACTCAGCTCAAGGAGCC +
Preference number: 6 (lower is better)
Translates to: GLSSPKKLHPPS*APLGQNSAQGA
Trigger: GGCTCCTTGAGCTGAGTTTTGCCCGAGTGGGGCTCATGAGGGAGGATGGAGTTTCTTGGGACTACTCAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS TCA 72 bp GCATTCCTGGATCACTGGCGCCTGTACAGCTGGCAGTaGGGTCAAGCCACAGCATTTCTTGGGACCACAGTA +
Preference number: 6 (lower is better)
Translates to: AFLDHWRLYSWQ*GQATAFLGTTV
Trigger: TACTGTGGTCCCAAGAAATGCTGTGGCTTGACCTCACTGCCAGCTGTACAGGCGCCAGTGATCCAGGAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS TCA 72 bp TCCTCCCGCAGCTGGATGGAGTTGGCCCGCATGTTCTaGGAGTGTTTGATGTTGTCGTTACTGAACTTGGCC +
Preference number: 6 (lower is better)
Translates to: SSRSWMELARMF*ECLMLSLLNLA
Trigger: GGCCAAGTTCAGTAACGACAACATCAAACACTCTCAGAACATGCGGGCCAACTCCATCCAGCTGCGGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000576638.1
CDS TCA 72 bp CTCGGCCTGGAAGATCTCCTGCAGCGTAGTTCCACATaGCTAGGAAGGCCTTACAATCATGGTGGAAGGCAG +
Preference number: 6 (lower is better)
Translates to: LGLEDLLQRSST*LGRPYNHGGRQ
Trigger: CTGCCTTCCACCATGATTGTAAGGCCTTCCTAGTCATGTGGAACTACGCTGCAGGAGATCTTCCAGGCCGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574923.1
CDS TCA 72 bp GAGCTTTTGTCTTCGAGGTCCCTCTCCAGCACGTGCTaGGCATCCCGGTTATCCCGCATCTGGATATCAATT +
Preference number: 6 (lower is better)
Translates to: ELLSSRSLSSTC*ASRLSRIWISI
Trigger: AATTGATATCCAGATGCGGGATAACCGGGATGCTCAGCACGTGCTGGAGAGGGACCTCGAAGACAAAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000576638.1
CDS CCA 72 bp TCATGGACCAAATCAATCCCAATCCTCTTCTCTCGATaGTACAGACACTCCAAGGCCACCTGCAATGGGCAG +
Preference number: 6 (lower is better)
Translates to: SWTKSIPILFSR*YRHSKATCNGQ
Trigger: CTGCCCATTGCAGGTGGCCTTGGAGTGTCTGTACCATCGAGAGAAGAGGATTGGGATTGATTTGGTCCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283025.7
CDS CCA 72 bp GGTACGGAGATCGTGCCGTCAATTTTCTCCATGCCGTaGAAGAAGCTGATGCAGTCTGACGTATTTCTCAGG +
Preference number: 6 (lower is better)
Translates to: GTEIVPSIFSMP*KKLMQSDVFLR
Trigger: CCTGAGAAATACGTCAGACTGCATCAGCTTCTTCCACGGCATGGAGAAAATTGACGGCACGATCTCCGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000576638.1
CDS CCA 72 bp GTATTTCTCAGGTTAAAGCACTTCTCATCGATACACTaGGCCGAGCTTTTGTCTTCGAGGTCCCTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: VFLRLKHFSSIH*AELLSSRSLSS
Trigger: GCTGGAGAGGGACCTCGAAGACAAAAGCTCGGCCCAGTGTATCGATGAGAAGTGCTTTAACCTGAGAAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000576638.1
CDS TCA 72 bp AAAGAACGTATTCTTCCTGTAGCTGTATGTAGACCCTaGGCAGAAGGGACTCACATCCACCCTTGCCACAAT +
Preference number: 6 (lower is better)
Translates to: KERILPVAVCRP*AEGTHIHPCHN
Trigger: ATTGTGGCAAGGGTGGATGTGAGTCCCTTCTGCTCAGGGTCTACATACAGCTACAGGAAGAATACGTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576638.1
CDS CCA 72 bp TCCACTTCCCGGATAAGGTTTTTCTCCACGTTGTCATaGACCAAATCAATCCCAATCCTCTTCTCTCGATGG +
Preference number: 6 (lower is better)
Translates to: STSRIRFFSTLS*TKSIPILFSRW
Trigger: CCATCGAGAGAAGAGGATTGGGATTGATTTGGTCCATGACAACGTGGAGAAAAACCTTATCCGGGAAGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000576638.1
CDS CAA 72 bp AGCAAATCCACTTCCCGGATAAGGTTTTTCTCCACGTaGTCATGGACCAAATCAATCCCAATCCTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: SKSTSRIRFFST*SWTKSIPILFS
Trigger: AGAGAAGAGGATTGGGATTGATTTGGTCCATGACAACGTGGAGAAAAACCTTATCCGGGAAGTGGATTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000576638.1
CDS CAA 90 bp CAACATTTTAGCAAATCCACTTCCCGGATAAGGTTTTTCTCCACGTaGTCATGGACCAAATCAATCCCAATCCTCTTCTCTCGATGGTAC +
Preference number: 6 (lower is better)
Translates to: QHFSKSTSRIRFFST*SWTKSIPILFSRWY
Trigger: GTACCATCGAGAGAAGAGGATTGGGATTGATTTGGTCCATGACAACGTGGAGAAAAACCTTATCCGGGAAGTGGATTTGCTAAAATGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000576638.1
CDS TCA 72 bp GCATCCCGGTTATCCCGCATCTGGATATCAATTCTTTaGGCTAATTTTCTCATCTGTTCTTGGCAACATTTT +
Preference number: 6 (lower is better)
Translates to: ASRLSRIWISIL*ANFLICSWQHF
Trigger: AAAATGTTGCCAAGAACAGATGAGAAAATTAGCTCAAAGAATTGATATCCAGATGCGGGATAACCGGGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283025.7
ENST00000576638.1