RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TEKT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000167858

Ensembl transcript IDs: ENST00000338694.7, ENST00000571744.1, ENST00000572291.1, ENST00000573966.1, ENST00000575592.1

Found 434 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACAGCTCCACGTTCGGCCGGTGTGTCCTGGTCTCCAAGCGCGTATaGGCCACCTTGGCTGGCCCTTCTTGGTCAAGGATGGCCTTTTCA +
Preference number: 1 (lower is better)
Translates to: HSSTFGRCVLVSKRV*ATLAGPSWSRMAFS
Trigger: TGAAAAGGCCATCCTTGACCAAGAAGGGCCAGCCAAGGTGGCTCATACGCGCTTGGAGACCAGGACACACCGGCCGAACGTGGAGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR CCA 90 bp ATTGTGCGACATCACGACACAGCTCCACGTTCGGCCGGTGTGTCCTaGTCTCCAAGCGCGTATGAGCCACCTTGGCTGGCCCTTCTTGGT +
Preference number: 1 (lower is better)
Translates to: IVRHHDTAPRSAGVS*SPSAYEPPWLALLG
Trigger: ACCAAGAAGGGCCAGCCAAGGTGGCTCATACGCGCTTGGAGACCAGGACACACCGGCCGAACGTGGAGCTGTGTCGTGATGTCGCACAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR CCA 90 bp GCCGTGTCCACCACATCACACTGCTTGCGCAGATCATTGGCTGTCTaGGACAGGATTCGATCCACCAGGGCTTTCAGCATCAGGGAGTTG +
Preference number: 1 (lower is better)
Translates to: AVSTTSHCLRRSLAV*DRIRSTRAFSIREL
Trigger: CAACTCCCTGATGCTGAAAGCCCTGGTGGATCGAATCCTGTCCCAGACAGCCAATGATCTGCGCAAGCAGTGTGATGTGGTGGACACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR TCA 90 bp CAACTAGAAGCTAGGTCTCCTGAGCCCCACACCGTCAGCTGTCCATaGGCACCGGGGAACCAAATGTTAGCAGAGTGTAGCAGCAGCTTC +
Preference number: 1 (lower is better)
Translates to: QLEARSPEPHTVSCP*APGNQMLAECSSSF
Trigger: GAAGCTGCTGCTACACTCTGCTAACATTTGGTTCCCCGGTGCTCATGGACAGCTGACGGTGTGGGGCTCAGGAGACCTAGCTTCTAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR GCA 90 bp CTGAGGCTGGCTGCCTCTGAGAGCTGTATTCACAAGGAAGGATTTTaGCCAGTGTCTTCACACCCTGCCAGCCACATCCTCTGGGACAGA +
Preference number: 1 (lower is better)
Translates to: LRLAASESCIHKEGF*PVSSHPASHILWDR
Trigger: TCTGTCCCAGAGGATGTGGCTGGCAGGGTGTGAAGACACTGGGCAAAATCCTTCCTTGTGAATACAGCTCTCAGAGGCAGCCAGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR CCA 90 bp CGGCCGGTGTGTCCTGGTCTCCAAGCGCGTATGAGCCACCTTGGCTaGCCCTTCTTGGTCAAGGATGGCCTTTTCAAGAGCTGTAATATT +
Preference number: 1 (lower is better)
Translates to: RPVCPGLQARMSHLG*PFLVKDGLFKSCNI
Trigger: AATATTACAGCTCTTGAAAAGGCCATCCTTGACCAAGAAGGGCCAGCCAAGGTGGCTCATACGCGCTTGGAGACCAGGACACACCGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR TCA 90 bp TCCTGCAGGGCAAGCTGTCTGCGATGCAGCCCTTTCAGCTCTGCCTaGGCTTGGGCTAAAGTTTCCTTCAATCTTGCGACATTGTGGGTG +
Preference number: 1 (lower is better)
Translates to: SCRASCLRCSPFSSA*AWAKVSFNLATLWV
Trigger: CACCCACAATGTCGCAAGATTGAAGGAAACTTTAGCCCAAGCTCAGGCAGAGCTGAAAGGGCTGCATCGCAGACAGCTTGCCCTGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR GCA 90 bp AGGATTCGATCCACCAGGGCTTTCAGCATCAGGGAGTTGTTCCGCTaGTTGTCAGCCTTCTCCACATTGGTGCTGGAGAAGTCCAACCAG +
Preference number: 1 (lower is better)
Translates to: RIRSTRAFSIRELFR*LSAFSTLVLEKSNQ
Trigger: CTGGTTGGACTTCTCCAGCACCAATGTGGAGAAGGCTGACAAGCAGCGGAACAACTCCCTGATGCTGAAAGCCCTGGTGGATCGAATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR TCA 90 bp AAGCCCTTTACGGAGGTGATCTCATTCAACGCCCCTATAGCCCTGTaGGTGGGGACTATTGGAGGTCCTATACTCAGATGGCAGACTCCG +
Preference number: 1 (lower is better)
Translates to: KPFTEVISFNAPIAL*VGTIGGPILRWQTP
Trigger: CGGAGTCTGCCATCTGAGTATAGGACCTCCAATAGTCCCCACTCACAGGGCTATAGGGGCGTTGAATGAGATCACCTCCGTAAAGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR TCA 90 bp TCCCACAGCAAATGTCTTCCTTTGACAGTCACCCACATAGATCTCTaGCCTGCTGCAGCTCAGCGGAAGGCAGCCTCCCACAAGTTGAAC +
Preference number: 1 (lower is better)
Translates to: SHSKCLPLTVTHIDL*PAAAQRKAASHKLN
Trigger: GTTCAACTTGTGGGAGGCTGCCTTCCGCTGAGCTGCAGCAGGTCAGAGATCTATGTGGGTGACTGTCAAAGGAAGACATTTGCTGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR TCA 90 bp CAGCCAGCTTGTCCCTGGCATCCTTTGTATCCTTCAGCCCATTCTTaGATGCCGTGTCCACCACATCACACTGCTTGCGCAGATCATTGG +
Preference number: 1 (lower is better)
Translates to: QPACPWHPLYPSAHS*MPCPPHHTACADHW
Trigger: CCAATGATCTGCGCAAGCAGTGTGATGTGGTGGACACGGCATTCAAGAATGGGCTGAAGGATACAAAGGATGCCAGGGACAAGCTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR GCA 90 bp GTATCCTTCAGCCCATTCTTGAATGCCGTGTCCACCACATCACACTaGTTGCGCAGATCATTGGCTGTCTGGGACAGGATTCGATCCACC +
Preference number: 1 (lower is better)
Translates to: VSFSPFLNAVSTTSH*LRRSLAVWDRIRST
Trigger: GGTGGATCGAATCCTGTCCCAGACAGCCAATGATCTGCGCAAGCAGTGTGATGTGGTGGACACGGCATTCAAGAATGGGCTGAAGGATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR GCA 90 bp CAGCTTGTCCCTGGCATCCTTTGTATCCTTCAGCCCATTCTTGAATaGCGTGTCCACCACATCACACTGCTTGCGCAGATCATTGGCTGT +
Preference number: 1 (lower is better)
Translates to: QLVPGILCILQPILE*RVHHITLLAQIIGC
Trigger: ACAGCCAATGATCTGCGCAAGCAGTGTGATGTGGTGGACACGGCATTCAAGAATGGGCTGAAGGATACAAAGGATGCCAGGGACAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR CCA 90 bp GGTGATCTCATTCAACGCCCCTATAGCCCTGTGAGTGGGGACTATTaGAGGTCCTATACTCAGATGGCAGACTCCGGAACCTACAGTCTT +
Preference number: 1 (lower is better)
Translates to: GDLIQRPYSPVSGDY*RSYTQMADSGTYSL
Trigger: AAGACTGTAGGTTCCGGAGTCTGCCATCTGAGTATAGGACCTCCAATAGTCCCCACTCACAGGGCTATAGGGGCGTTGAATGAGATCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR CCA 90 bp GAAGGATTTTGCCCAGTGTCTTCACACCCTGCCAGCCACATCCTCTaGGACAGACCTCAAAACCCTGCTAAGTTAGCAGAAACTCTGAGG +
Preference number: 1 (lower is better)
Translates to: EGFCPVSSHPASHIL*DRPQNPAKLAETLR
Trigger: CCTCAGAGTTTCTGCTAACTTAGCAGGGTTTTGAGGTCTGTCCCAGAGGATGTGGCTGGCAGGGTGTGAAGACACTGGGCAAAATCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR TCA 90 bp CCTCAAAACCCTGCTAAGTTAGCAGAAACTCTGAGGTCTGCCCAGTaGGCTGGGAAGGCTTATTTGGACTCTTCCGAGCCAGAGCAGAAA +
Preference number: 1 (lower is better)
Translates to: PQNPAKLAETLRSAQ*AGKAYLDSSEPEQK
Trigger: TTTCTGCTCTGGCTCGGAAGAGTCCAAATAAGCCTTCCCAGCTCACTGGGCAGACCTCAGAGTTTCTGCTAACTTAGCAGGGTTTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR TCA 90 bp ACCTGGCTTTTGGAGCCAGGTGTCTGGATGAGTACTGGCCTGCCATaGACTTGTCTTGTGCCTTGGGGCAAGAATTTAACCTCCTTGAGT +
Preference number: 1 (lower is better)
Translates to: TWLLEPGVWMSTGLP*TCLVPWGKNLTSLS
Trigger: ACTCAAGGAGGTTAAATTCTTGCCCCAAGGCACAAGACAAGTTCATGGCAGGCCAGTACTCATCCAGACACCTGGCTCCAAAAGCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571744.1
3UTR TCA 90 bp GTTTGGCTCAATCCTCACGGCGTTCTCAGAATATCTGATGTTTGGTaGGTTGTTGTTGAGCGAGAAGCAGATATCATCTATGGTCAGGGC +
Preference number: 1 (lower is better)
Translates to: VWLNPHGVLRISDVW*VVVEREADIIYGQG
Trigger: GCCCTGACCATAGATGATATCTGCTTCTCGCTCAACAACAACTCACCAAACATCAGATATTCTGAGAACGCCGTGAGGATTGAGCCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR TCA 90 bp CTCGCCAATCTAGGCTTTATTAGTCTTATTTACAGATTAGGCAACTaGAGCTCGGGGAAGTTGAGTAACTTGGCGGGGATCACATCACAG +
Preference number: 1 (lower is better)
Translates to: LANLGFISLIYRLGN*SSGKLSNLAGITSQ
Trigger: CTGTGATGTGATCCCCGCCAAGTTACTCAACTTCCCCGAGCTTCAGTTGCCTAATCTGTAAATAAGACTAATAAAGCCTAGATTGGCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR TCA 90 bp TGGGCTAAAGTTTCCTTCAATCTTGCGACATTGTGGGTGATCTCTTaGACCTCCTTCATTAGCCTATATTGTGCGACATCACGACACAGC +
Preference number: 1 (lower is better)
Translates to: WAKVSFNLATLWVIS*TSFISLYCATSRHS
Trigger: GCTGTGTCGTGATGTCGCACAATATAGGCTAATGAAGGAGGTTCAAGAGATCACCCACAATGTCGCAAGATTGAAGGAAACTTTAGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR CCA 90 bp CAATTGTGCAGAAATTATGTTGGTATAGGGTGGGACTGCTCACAATaGCTCACATTCATTAAACACTCACTGCCCCATGATACAGGCTCA +
Preference number: 1 (lower is better)
Translates to: QLCRNYVGIGWDCSQ*LTFIKHSLPHDTGS
Trigger: TGAGCCTGTATCATGGGGCAGTGAGTGTTTAATGAATGTGAGCCATTGTGAGCAGTCCCACCCTATACCAACATAATTTCTGCACAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR TCA 90 bp AAGTCCTGTGATATTGTAAGAGTGGCCTGTGCTAAAATATGGAGTTaGATTGTTAGGCAAACACCACACCAGCATAAGAGAAGAAACTCG +
Preference number: 1 (lower is better)
Translates to: KSCDIVRVACAKIWS*IVRQTPHQHKRRNS
Trigger: CGAGTTTCTTCTCTTATGCTGGTGTGGTGTTTGCCTAACAATTCAACTCCATATTTTAGCACAGGCCACTCTTACAATATCACAGGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338694.7
ENST00000575592.1
3UTR-3UTR GCA 90 bp TCGGCCGGTGTGTCCTGGTCTCCAAGCGCGTATGAGCCACCTTGGCTGGCCCTTTGCCAGCCAAGAGGTTaGAGCAGGCTGGCTAGAGGC +
Preference number: 2 (lower is better)
Translates to: SAGVSWSPSAYEPPWLALCQPRG*SRLARG
Trigger: GCCTCTAGCCAGCCTGCTGCAACCTCTTGGCTGGCA...AAGGGCCAGCCAAGGTGGCTCATACGCGCTTGGAGACCAGGACACACCGGCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR-3UTR CCA 90 bp GCCCAGACCCCATGGTCTTCCCCATCCCGAAGTGGGATGGATTTCCTCATCTGCGAGGTTGCAGCAGGCTaGCTAGAGGCCCCGCCAGCC +
Preference number: 2 (lower is better)
Translates to: AQTPWSSPSRSGMDFLICEVAAG*LEAPPA
Trigger: GGCTGGCGGGGCCTCTAGCCAGCCTGCTGCAACCTC...GCAGATGAGGAAATCCATCCCACTTCGGGATGGGGAAGACCATGGGGTCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR-3UTR TCA 90 bp TCGGCCGGTGTGTCCTGGTCTCCAAGCGCGTATGAGCCACCTTGGCTGGCCCTTGAGGCCCCGCCAGCCTaGAATGAGAGCTCTGTACTA +
Preference number: 2 (lower is better)
Translates to: SAGVSWSPSAYEPPWLALEAPPA*NESSVL
Trigger: TAGTACAGAGCTCTCATTTCAGGCTGGCGGGGCCTC...AAGGGCCAGCCAAGGTGGCTCATACGCGCTTGGAGACCAGGACACACCGGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR-3UTR TCA 90 bp CGCCCCTATAGCCCTGTGAGTGGGGACTATTGGAGGTCCTATACTCAGATGGCAGAGGCCCCGCCAGCCTaGAATGAGAGCTCTGTACTA +
Preference number: 2 (lower is better)
Translates to: RPYSPVSGDYWRSYTQMAEAPPA*NESSVL
Trigger: TAGTACAGAGCTCTCATTTCAGGCTGGCGGGGCCTC...TGCCATCTGAGTATAGGACCTCCAATAGTCCCCACTCACAGGGCTATAGGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR TCA 90 bp TTCACAAGGAAGGATTTTGCCCAGTGTCTTCACACCCTGCCAGCCACATCCTCTGCCTCCCTCCTTGATTaGGGCATGGGAAGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: FTRKDFAQCLHTLPATSSASLLD*GMGRAV
Trigger: CACAGCCCTTCCCATGCCTCAATCAAGGAGGGAGGC...AGAGGATGTGGCTGGCAGGGTGTGAAGACACTGGGCAAAATCCTTCCTTGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR GCA 90 bp GCCCAGACCCCATGGTCTTCCCCATCCCGAAGTGGGATGGATTTCCTCATCTGCCCTTCTCCACATTGGTaGTGGAGAAGTCCAACCAGT +
Preference number: 2 (lower is better)
Translates to: AQTPWSSPSRSGMDFLICPSPHW*WRSPTS
Trigger: ACTGGTTGGACTTCTCCAGCACCAATGTGGAGAAGG...GCAGATGAGGAAATCCATCCCACTTCGGGATGGGGAAGACCATGGGGTCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR CAA 90 bp TCCTTCAGCCCATTCTTGAATGCCGTGTCCACCACATCACACTGCTaGCGCAGATCATTGGCTGTCTGGGACAGGATTCGATCCACCAGG +
Preference number: 2 (lower is better)
Translates to: SFSPFLNAVSTTSHC*RRSLAVWDRIRSTR
Trigger: CCTGGTGGATCGAATCCTGTCCCAGACAGCCAATGATCTGCGCAAGCAGTGTGATGTGGTGGACACGGCATTCAAGAATGGGCTGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR-3UTR GCA 90 bp CTTCCCCATCCCGAAGTGGGATGGATTTCCTCATCTGCATACACAGCACTTCGTGCAGGGCAAGCTGTCTaGGATGCAGCCCTTTCAGCT +
Preference number: 2 (lower is better)
Translates to: LPHPEVGWISSSAYTALRAGQAV*DAALSA
Trigger: AGCTGAAAGGGCTGCATCGCAGACAGCTTGCCCTGC...ACGAAGTGCTGTGTATGCAGATGAGGAAATCCATCCCACTTCGGGATGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR-3UTR CCA 90 bp TTCACAAGGAAGGATTTTGCCCAGTGTCTTCACACCCTGCCAGCCACATCCTCTCCCCCTGAGCAGGCTTaGAATGCCAGCCAAGAGGTT +
Preference number: 2 (lower is better)
Translates to: FTRKDFAQCLHTLPATSSPPEQA*NASQEV
Trigger: AACCTCTTGGCTGGCATTCCAAGCCTGCTCAGGGGG...AGAGGATGTGGCTGGCAGGGTGTGAAGACACTGGGCAAAATCCTTCCTTGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR CCA 90 bp ATCACATCTCCCTGCAGAGCCTGGGATCTGAATCCACCACTGAGGCTGGCTGCCTATGTTGGTATAGGGTaGGACTGCTCACAATGGCTC +
Preference number: 2 (lower is better)
Translates to: ITSPCRAWDLNPPLRLAAYVGIG*DCSQWL
Trigger: GAGCCATTGTGAGCAGTCCCACCCTATACCAACATA...GGCAGCCAGCCTCAGTGGTGGATTCAGATCCCAGGCTCTGCAGGGAGATGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR CAA 90 bp ATTCGATCCACCAGGGCTTTCAGCATCAGGGAGTTGTTCCGCTGCTaGTCAGCCTTCTCCACATTGGTGCTGGAGAAGTCCAACCAGTCT +
Preference number: 2 (lower is better)
Translates to: IRSTRAFSIRELFRC*SAFSTLVLEKSNQS
Trigger: AGACTGGTTGGACTTCTCCAGCACCAATGTGGAGAAGGCTGACAAGCAGCGGAACAACTCCCTGATGCTGAAAGCCCTGGTGGATCGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR CAA 90 bp TTCTTGAATGCCGTGTCCACCACATCACACTGCTTGCGCAGATCATaGGCTGTCTGGGACAGGATTCGATCCACCAGGGCTTTCAGCATC +
Preference number: 2 (lower is better)
Translates to: FLNAVSTTSHCLRRS*AVWDRIRSTRAFSI
Trigger: GATGCTGAAAGCCCTGGTGGATCGAATCCTGTCCCAGACAGCCAATGATCTGCGCAAGCAGTGTGATGTGGTGGACACGGCATTCAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR-3UTR CCA 90 bp TTTCCTTACTTTACAGGTGGTCCTAAAGAAGGAGAGAAACTTTCCTGGCAGTGTGAGGTTGCAGCAGGCTaGCTAGAGGCCCCGCCAGCC +
Preference number: 2 (lower is better)
Translates to: FPYFTGGPKEGEKLSWQCEVAAG*LEAPPA
Trigger: GGCTGGCGGGGCCTCTAGCCAGCCTGCTGCAACCTC...ACACTGCCAGGAAAGTTTCTCTCCTTCTTTAGGACCACCTGTAAAGTAAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR CCA 90 bp ACAGGATTCGATCCACCAGGGCTTTCAGCATCAGGGAGTTGTTCCGCTGCTTGTCAGCCTTCTCCACATTaGTGCTGGAGAAGTCCAACC +
Preference number: 2 (lower is better)
Translates to: TGFDPPGLSASGSCSAACQPSPH*CWRSPT
Trigger: GGTTGGACTTCTCCAGCACCAATGTGGAGAAGGCTG...ACAAGCAGCGGAACAACTCCCTGATGCTGAAAGCCCTGGTGGATCGAATCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR CAA 90 bp TCAGCCAGCTTGTCCCTGGCATCCTTTGTATCCTTCAGCCCATTCTaGAATGCCGTGTCCACCACATCACACTGCTTGCGCAGATCATTG +
Preference number: 2 (lower is better)
Translates to: SASLSLASFVSFSPF*NAVSTTSHCLRRSL
Trigger: CAATGATCTGCGCAAGCAGTGTGATGTGGTGGACACGGCATTCAAGAATGGGCTGAAGGATACAAAGGATGCCAGGGACAAGCTGGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR-3UTR TCA 90 bp CCCTTTCTGATGGCAAAGAGTCTCTGGACCAAGGAGCACCTAGATTGCAAAGCTGGGCCCCAAGTCCTGTaGTATTGTAAGAGTGGCCTG +
Preference number: 2 (lower is better)
Translates to: PFLMAKSLWTKEHLDCKAGPQVL*YCKSGL
Trigger: CAGGCCACTCTTACAATATCACAGGACTTGGGGCCC...AGCTTTGCAATCTAGGTGCTCCTTGGTCCAGAGACTCTTTGCCATCAGAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR TCA 90 bp CGCCCCTATAGCCCTGTGAGTGGGGACTATTGGAGGTCCTATACTCAGATGGCACATGGTCTACACAGGTaGTCCAGCCCAACTACTTTA +
Preference number: 2 (lower is better)
Translates to: RPYSPVSGDYWRSYTQMAHGLHR*SSPTTL
Trigger: TAAAGTAGTTGGGCTGGATCACCTGTGTAGACCATG...TGCCATCTGAGTATAGGACCTCCAATAGTCCCCACTCACAGGGCTATAGGGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR GCA 90 bp CTAGACAGCCAGATTCAGGGAACAGCAAGGACAGGAAGAGTTCCAGACGATATAAGATCTCTGACCTGCTaGAGCTCAGCGGAAGGCAGC +
Preference number: 2 (lower is better)
Translates to: LDSQIQGTARTGRVPDDIRSLTC*SSAEGS
Trigger: GCTGCCTTCCGCTGAGCTGCAGCAGGTCAGAGATCT...TATATCGTCTGGAACTCTTCCTGTCCTTGCTGTTCCCTGAATCTGGCTGTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR TCA 90 bp CTGGCAGTGTTGCAACTAGAAGCTAGGTCTCCTGAGCCCCACACCGTCAGCTGTGGAATAAGGAACAAATaGGCAGTTTCCCACAGCAAA +
Preference number: 2 (lower is better)
Translates to: LAVLQLEARSPEPHTVSCGIRNK*AVSHSK
Trigger: TTTGCTGTGGGAAACTGCTCATTTGTTCCTTATTCC...ACAGCTGACGGTGTGGGGCTCAGGAGACCTAGCTTCTAGTTGCAACACTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR TCA 90 bp GCCCAGACCCCATGGTCTTCCCCATCCCGAAGTGGGATGGATTTCCTCATCTGCCGTTCTCAGAATATCTaGTGTTTGGTGAGTTGTTGT +
Preference number: 2 (lower is better)
Translates to: AQTPWSSPSRSGMDFLICRSQNI*CLVSCC
Trigger: ACAACAACTCACCAAACATCAGATATTCTGAGAACG...GCAGATGAGGAAATCCATCCCACTTCGGGATGGGGAAGACCATGGGGTCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR-3UTR GCA 90 bp GAATTAGGCCCACACTCTGCATTATCATTGTGCCCTATGACACCGTATGTGCAGCATAGATCTCTGACCTaGTGCAGCTCAGCGGAAGGC +
Preference number: 2 (lower is better)
Translates to: ELGPHSALSLCPMTPYVQHRSLT*CSSAEG
Trigger: GCCTTCCGCTGAGCTGCAGCAGGTCAGAGATCTATG...CTGCACATACGGTGTCATAGGGCACAATGATAATGCAGAGTGTGGGCCTAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR GCA 90 bp GCCTGGGATCTGAATCCACCACTGAGGCTGGCTGCCTCTGAGAGCTGTATTCACTCTGCATTATCATTGTaGCCTATGACACCGTATGTG +
Preference number: 2 (lower is better)
Translates to: AWDLNPPLRLAASESCIHSALSL*PMTPYV
Trigger: CACATACGGTGTCATAGGGCACAATGATAATGCAGA...GTGAATACAGCTCTCAGAGGCAGCCAGCCTCAGTGGTGGATTCAGATCCCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR CCA 90 bp GCCTGGGATCTGAATCCACCACTGAGGCTGGCTGCCTCTGAGAGCTGTATTCACTGGGACTGCTCACAATaGCTCACATTCATTAAACAC +
Preference number: 2 (lower is better)
Translates to: AWDLNPPLRLAASESCIHWDCSQ*LTFIKH
Trigger: GTGTTTAATGAATGTGAGCCATTGTGAGCAGTCCCA...GTGAATACAGCTCTCAGAGGCAGCCAGCCTCAGTGGTGGATTCAGATCCCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR CCA 90 bp ATTTGGACTCTTCCGAGCCAGAGCAGAAAAGCACCCAGAGGCTTCCCAGTGAGCCGTTCAGCACTGGGGTaGCATAGATCAGAATTAACA +
Preference number: 2 (lower is better)
Translates to: IWTLPSQSRKAPRGFPVSRSALG*HRSELT
Trigger: TGTTAATTCTGATCTATGCCACCCCAGTGCTGAACG...GCTCACTGGGAAGCCTCTGGGTGCTTTTCTGCTCTGGCTCGGAAGAGTCCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR CAA 90 bp TTAAGCCAGTGCTTTTGGCCTCAAAGGGGGTTTCTCCATCCCAGATaGGGAACATCCCTTTCTGATGGCAAAGAGTCTCTGGACCAAGGA +
Preference number: 2 (lower is better)
Translates to: LSQCFWPQRGFLHPR*GTSLSDGKESLDQG
Trigger: TCCTTGGTCCAGAGACTCTTTGCCATCAGAAAGGGATGTTCCCAATCTGGGATGGAGAAACCCCCTTTGAGGCCAAAAGCACTGGCTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR CCA 90 bp TGGGACAGACCTCAAAACCCTGCTAAGTTAGCAGAAACTCTGAGGTCTGCCCAGGTGAGTGGGGACTATTaGAGGTCCTATACTCAGATG +
Preference number: 2 (lower is better)
Translates to: WDRPQNPAKLAETLRSAQVSGDY*RSYTQM
Trigger: CATCTGAGTATAGGACCTCCAATAGTCCCCACTCAC...CTGGGCAGACCTCAGAGTTTCTGCTAACTTAGCAGGGTTTTGAGGTCTGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR CCA 90 bp GATCCACCAGCTGATCTGAATCACATCTCCCTGCAGAGCCTGGGATCTGAATCCTTCTCCATCCCAGATTaGGAACATCCCTTTCTGATG +
Preference number: 2 (lower is better)
Translates to: DPPADLNHISLQSLGSESFSIPD*EHPFLM
Trigger: CATCAGAAAGGGATGTTCCCAATCTGGGATGGAGAA...GGATTCAGATCCCAGGCTCTGCAGGGAGATGTGATTCAGATCAGCTGGTGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR CCA 90 bp CCACATCACACTGCTTGCGCAGATCATTGGCTGTCTGGGACAGGATTCGATCCATCTCAAGATTGTACTTaGCAGAGCGGTTCATCCGAA +
Preference number: 2 (lower is better)
Translates to: PHHTACADHWLSGTGFDPSQDCT*QSGSSE
Trigger: TTCGGATGAACCGCTCTGCCAAGTACAATCTTGAGA...TGGATCGAATCCTGTCCCAGACAGCCAATGATCTGCGCAAGCAGTGTGATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR CAA 90 bp AGATTGCAAAGCTCCCAGGAATTAGGCCCACACTCTGCATTATCATaGTGCCCTATGACACCGTATGTGCAGCTAGACAGCCAGATTCAG +
Preference number: 2 (lower is better)
Translates to: RLQSSQELGPHSALS*CPMTPYVQLDSQIQ
Trigger: CTGAATCTGGCTGTCTAGCTGCACATACGGTGTCATAGGGCACAATGATAATGCAGAGTGTGGGCCTAATTCCTGGGAGCTTTGCAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR CAA 90 bp TCCCTTTCTGATGGCAAAGAGTCTCTGGACCAAGGAGCACCTAGATaGCAAAGCTCCCAGGAATTAGGCCCACACTCTGCATTATCATTG +
Preference number: 2 (lower is better)
Translates to: SLSDGKESLDQGAPR*QSSQELGPHSALSL
Trigger: CAATGATAATGCAGAGTGTGGGCCTAATTCCTGGGAGCTTTGCAATCTAGGTGCTCCTTGGTCCAGAGACTCTTTGCCATCAGAAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR TCA 90 bp TTTCCTTACTTTACAGGTGGTCCTAAAGAAGGAGAGAAACTTTCCTGGCAGTGTACCGTCAGCTGTCCATaGGCACCGGGGAACCAAATG +
Preference number: 2 (lower is better)
Translates to: FPYFTGGPKEGEKLSWQCTVSCP*APGNQM
Trigger: CATTTGGTTCCCCGGTGCTCATGGACAGCTGACGGT...ACACTGCCAGGAAAGTTTCTCTCCTTCTTTAGGACCACCTGTAAAGTAAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR CCA 90 bp TGGCCTGTGCTAAAATATGGAGTTGAATTGTTAGGCAAACACCACACCAGCATACCCCCTGAGCAGGCTTaGAATGCCAGCCAAGAGGTT +
Preference number: 2 (lower is better)
Translates to: WPVLKYGVELLGKHHTSIPPEQA*NASQEV
Trigger: AACCTCTTGGCTGGCATTCCAAGCCTGCTCAGGGGG...TATGCTGGTGTGGTGTTTGCCTAACAATTCAACTCCATATTTTAGCACAGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338694.7
ENST00000575592.1
3UTR-3UTR TCA 90 bp TGGCCTGTGCTAAAATATGGAGTTGAATTGTTAGGCAAACACCACACCAGCATACCCGCCAGCCTGAAATaGGAGCTCTGTACTACTGTA +
Preference number: 2 (lower is better)
Translates to: WPVLKYGVELLGKHHTSIPASLK*ELCTTV
Trigger: TACAGTAGTACAGAGCTCTCATTTCAGGCTGGCGGG...TATGCTGGTGTGGTGTTTGCCTAACAATTCAACTCCATATTTTAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338694.7
ENST00000575592.1
3UTR CAA 90 bp TTGTTGAGCGAGAAGCAGATATCATCTATGGTCAGGGCCACAAACTaGTCCTTCAAATCCTTCTCAAGATTGTACTTGGCAGAGCGGTTC +
Preference number: 2 (lower is better)
Translates to: LLSEKQISSMVRATN*SFKSFSRLYLAERF
Trigger: GAACCGCTCTGCCAAGTACAATCTTGAGAAGGATTTGAAGGACAAGTTTGTGGCCCTGACCATAGATGATATCTGCTTCTCGCTCAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR CAA 90 bp ATCCTCACGGCGTTCTCAGAATATCTGATGTTTGGTGAGTTGTTGTaGAGCGAGAAGCAGATATCATCTATGGTCAGGGCCACAAACTTG +
Preference number: 2 (lower is better)
Translates to: ILTAFSEYLMFGELL*SEKQISSMVRATNL
Trigger: CAAGTTTGTGGCCCTGACCATAGATGATATCTGCTTCTCGCTCAACAACAACTCACCAAACATCAGATATTCTGAGAACGCCGTGAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR CAA 90 bp TCAATCCTCACGGCGTTCTCAGAATATCTGATGTTTGGTGAGTTGTaGTTGAGCGAGAAGCAGATATCATCTATGGTCAGGGCCACAAAC +
Preference number: 2 (lower is better)
Translates to: SILTAFSEYLMFGEL*LSEKQISSMVRATN
Trigger: GTTTGTGGCCCTGACCATAGATGATATCTGCTTCTCGCTCAACAACAACTCACCAAACATCAGATATTCTGAGAACGCCGTGAGGATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR-3UTR TCA 90 bp CCTCATCTGCATACACAGCACTTCGTCGATATAAATGGTGTTCTCTTTGACCTGAAGCAATCTCTTCCATaGCCTTGGCCAGATGATCAG +
Preference number: 2 (lower is better)
Translates to: PHLHTQHFVDINGVLFDLKQSLP*PWPDDQ
Trigger: CTGATCATCTGGCCAAGGTCATGGAAGAGATTGCTT...CAGGTCAAAGAGAACACCATTTATATCGACGAAGTGCTGTGTATGCAGATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR-3UTR CCA 90 bp CCTCATCTGCATACACAGCACTTCGTCGATATAAATGGTGTTCTCTTTGACCTGAGAGCCATAATGCCCTaGATGATCTCAGCCTCCTTT +
Preference number: 2 (lower is better)
Translates to: PHLHTQHFVDINGVLFDLRAIMP*MISASF
Trigger: AAAGGAGGCTGAGATCATCCAGGGCATTATGGCTCT...CAGGTCAAAGAGAACACCATTTATATCGACGAAGTGCTGTGTATGCAGATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR-3UTR CCA 90 bp GATGTTGAACATAGATGTGAATGGCCAAGTTTGATGGCCCCAAACCTGGCTTTTTGTCTGGATGAGTACTaGCCTGCCATGAACTTGTCT +
Preference number: 2 (lower is better)
Translates to: DVEHRCEWPSLMAPNLAFCLDEY*PAMNLS
Trigger: AGACAAGTTCATGGCAGGCCAGTACTCATCCAGACA...AAAAGCCAGGTTTGGGGCCATCAAACTTGGCCATTCACATCTATGTTCAACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571744.1
3UTR-3UTR GCA 90 bp TTCACAAGGAAGGATTTTGCCCAGTGTCTTCACACCCTGCCAGCCACATCCTCTCTGAAATTGAGTTTATaGCATGAGTACAATTGTGCA +
Preference number: 2 (lower is better)
Translates to: FTRKDFAQCLHTLPATSSLKLSL*HEYNCA
Trigger: TGCACAATTGTACTCATGGCATAAACTCAATTTCAG...AGAGGATGTGGCTGGCAGGGTGTGAAGACACTGGGCAAAATCCTTCCTTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR CCA 90 bp TCCTTTCCTTACTTTACAGGTGGTCCTAAAGAAGGAGAGAAACTTTCCTGGCAGGTGCAGAAATTATGTTaGTATAGGGTGGGACTGCTC +
Preference number: 2 (lower is better)
Translates to: SFPYFTGGPKEGEKLSWQVQKLC*YRVGLL
Trigger: GAGCAGTCCCACCCTATACCAACATAATTTCTGCAC...CTGCCAGGAAAGTTTCTCTCCTTCTTTAGGACCACCTGTAAAGTAAGGAAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR CCA 90 bp GATGTTGAACATAGATGTGAATGGCCAAGTTTGATGGCCCCAAACCTGGCTTTTACTTGTCTTGTGCCTTaGGGCAAGAATTTAACCTCC +
Preference number: 2 (lower is better)
Translates to: DVEHRCEWPSLMAPNLAFTCLVP*GKNLTS
Trigger: GGAGGTTAAATTCTTGCCCCAAGGCACAAGACAAGT...AAAAGCCAGGTTTGGGGCCATCAAACTTGGCCATTCACATCTATGTTCAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571744.1
3UTR-3UTR TCA 90 bp TCCTTTCCTTACTTTACAGGTGGTCCTAAAGAAGGAGAGAAACTTTCCTGGCAGCAGCCTCCCACAAGTTaGACTCTTTTTGGAAAAGAA +
Preference number: 2 (lower is better)
Translates to: SFPYFTGGPKEGEKLSWQQPPTS*TLFGKE
Trigger: TTCTTTTCCAAAAAGAGTTCAACTTGTGGGAGGCTG...CTGCCAGGAAAGTTTCTCTCCTTCTTTAGGACCACCTGTAAAGTAAGGAAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR CCA 90 bp TTTCCTTACTTTACAGGTGGTCCTAAAGAAGGAGAGAAACTTTCCTGGCAGTGTGGTAAGCCTCGTCCATaGAAAGTGTTCCTTCAATGT +
Preference number: 2 (lower is better)
Translates to: FPYFTGGPKEGEKLSWQCGKPRP*KVFLQC
Trigger: ACATTGAAGGAACACTTTCCATGGACGAGGCTTACC...ACACTGCCAGGAAAGTTTCTCTCCTTCTTTAGGACCACCTGTAAAGTAAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR TCA 90 bp GGATGGATTTCCTCATCTGCATACACAGCACTTCGTCGATATAAATGGTGTTCTTTGGTGAGTTGTTGTTaGGCGAGAAGCAGATATCAT +
Preference number: 2 (lower is better)
Translates to: GWISSSAYTALRRYKWCSLVSCC*ARSRYH
Trigger: ATGATATCTGCTTCTCGCTCAACAACAACTCACCAA...AGAACACCATTTATATCGACGAAGTGCTGTGTATGCAGATGAGGAAATCCATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR-3UTR CCA 90 bp TACTGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGATTGGCTGGCCCTTCTTaGTCAAGGATGGCCTTTTCA +
Preference number: 2 (lower is better)
Translates to: YCLQCGLMRIGTSPTISRLAGPS*SRMAFS
Trigger: TGAAAAGGCCATCCTTGACCAAGAAGGGCCAGCCAA...TCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR CCA 72 bp CATCACGACACAGCTCCACGTTCGGCCGGTGTGTCCTaGTCTCCAAGCGCGTATGAGCCACCTTGGCTGGCC +
Preference number: 3 (lower is better)
Translates to: HHDTAPRSAGVS*SPSAYEPPWLA
Trigger: GGCCAGCCAAGGTGGCTCATACGCGCTTGGAGACCAGGACACACCGGCCGAACGTGGAGCTGTGTCGTGATG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR TCA 72 bp ACGTTCGGCCGGTGTGTCCTGGTCTCCAAGCGCGTATaGGCCACCTTGGCTGGCCCTTCTTGGTCAAGGATG +
Preference number: 3 (lower is better)
Translates to: TFGRCVLVSKRV*ATLAGPSWSRM
Trigger: CATCCTTGACCAAGAAGGGCCAGCCAAGGTGGCTCATACGCGCTTGGAGACCAGGACACACCGGCCGAACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR TCA 72 bp GCTAGGTCTCCTGAGCCCCACACCGTCAGCTGTCCATaGGCACCGGGGAACCAAATGTTAGCAGAGTGTAGC +
Preference number: 3 (lower is better)
Translates to: ARSPEPHTVSCP*APGNQMLAECS
Trigger: GCTACACTCTGCTAACATTTGGTTCCCCGGTGCTCATGGACAGCTGACGGTGTGGGGCTCAGGAGACCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR CAA 90 bp GCCCAGACCCCATGGTCTTCCCCATCCCGAAGTGGGATGGATTTCCTCATCTGCTGCTTGCGCAGATCATaGGCTGTCTGGGACAGGATT +
Preference number: 3 (lower is better)
Translates to: AQTPWSSPSRSGMDFLICCLRRS*AVWDRI
Trigger: AATCCTGTCCCAGACAGCCAATGATCTGCGCAAGCA...GCAGATGAGGAAATCCATCCCACTTCGGGATGGGGAAGACCATGGGGTCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR TCA 72 bp CTTCCCAGTGAGCAGAGAGGGGCCTCCCTCCTTGATTaGGGCATGGGAAGGGCTGTGTATTTGCTGAGCACT +
Preference number: 3 (lower is better)
Translates to: LPSEQRGASLLD*GMGRAVYLLST
Trigger: AGTGCTCAGCAAATACACAGCCCTTCCCATGCCTCAATCAAGGAGGGAGGCCCCTCTCTGCTCACTGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR CCA 72 bp CCGTGTCCACCACATCACACTGCTTGCGCAGATCATTaGCTGTCTGGGACAGGATTCGATCCACCAGGGCTT +
Preference number: 3 (lower is better)
Translates to: PCPPHHTACADH*LSGTGFDPPGL
Trigger: AAGCCCTGGTGGATCGAATCCTGTCCCAGACAGCCAATGATCTGCGCAAGCAGTGTGATGTGGTGGACACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR CCA 72 bp TGTCCTGGTCTCCAAGCGCGTATGAGCCACCTTGGCTaGCCCTTCTTGGTCAAGGATGGCCTTTTCAAGAGC +
Preference number: 3 (lower is better)
Translates to: CPGLQARMSHLG*PFLVKDGLFKS
Trigger: GCTCTTGAAAAGGCCATCCTTGACCAAGAAGGGCCAGCCAAGGTGGCTCATACGCGCTTGGAGACCAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR CCA 72 bp GGTGTGTCCTGGTCTCCAAGCGCGTATGAGCCACCTTaGCTGGCCCTTCTTGGTCAAGGATGGCCTTTTCAA +
Preference number: 3 (lower is better)
Translates to: GVSWSPSAYEPP*LALLGQGWPFQ
Trigger: TTGAAAAGGCCATCCTTGACCAAGAAGGGCCAGCCAAGGTGGCTCATACGCGCTTGGAGACCAGGACACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR CCA 72 bp CCCAGCCCAGACCCCATGGTCTTCCCCATCCCGAAGTaGGATGGATTTCCTCATCTGCATACACAGCACTTC +
Preference number: 3 (lower is better)
Translates to: PSPDPMVFPIPK*DGFPHLHTQHF
Trigger: GAAGTGCTGTGTATGCAGATGAGGAAATCCATCCCACTTCGGGATGGGGAAGACCATGGGGTCTGGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR GCA 72 bp TCCACCAGGGCTTTCAGCATCAGGGAGTTGTTCCGCTaGTTGTCAGCCTTCTCCACATTGGTGCTGGAGAAG +
Preference number: 3 (lower is better)
Translates to: STRAFSIRELFR*LSAFSTLVLEK
Trigger: CTTCTCCAGCACCAATGTGGAGAAGGCTGACAAGCAGCGGAACAACTCCCTGATGCTGAAAGCCCTGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR CCA 72 bp CCCAGACCCCATGGTCTTCCCCATCCCGAAGTGGGATaGATTTCCTCATCTGCATACACAGCACTTCGTCGA +
Preference number: 3 (lower is better)
Translates to: PRPHGLPHPEVG*ISSSAYTALRR
Trigger: TCGACGAAGTGCTGTGTATGCAGATGAGGAAATCCATCCCACTTCGGGATGGGGAAGACCATGGGGTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR-3UTR CAA 90 bp ATCACATCTCCCTGCAGAGCCTGGGATCTGAATCCACCACTGAGGCTGGCTGCCTGTGAGTGGGGACTATaGGAGGTCCTATACTCAGAT +
Preference number: 3 (lower is better)
Translates to: ITSPCRAWDLNPPLRLAACEWGL*EVLYSD
Trigger: ATCTGAGTATAGGACCTCCAATAGTCCCCACTCACA...GGCAGCCAGCCTCAGTGGTGGATTCAGATCCCAGGCTCTGCAGGGAGATGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR CAA 90 bp GAATTGGAACTAGCCCTACTATTAGCAGACAGCATCAGGGCGGAGGCCCCCAGCTGTCCCTGGCATCCTTaGTATCCTTCAGCCCATTCT +
Preference number: 3 (lower is better)
Translates to: ELELALLLADSIRAEAPSCPWHP*YPSAHS
Trigger: AGAATGGGCTGAAGGATACAAAGGATGCCAGGGACA...GCTGGGGGCCTCCGCCCTGATGCTGTCTGCTAATAGTAGGGCTAGTTCCAATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR GCA 72 bp AGTTGTTCCGCTGCTTGTCAGCCTTCTCCACATTGGTaGTGGAGAAGTCCAACCAGTCTTCCAGACTCACGG +
Preference number: 3 (lower is better)
Translates to: SCSAACQPSPHW*WRSPTSLPDSR
Trigger: CCGTGAGTCTGGAAGACTGGTTGGACTTCTCCAGCACCAATGTGGAGAAGGCTGACAAGCAGCGGAACAACT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR CCA 72 bp ATTCAACGCCCCTATAGCCCTGTGAGTGGGGACTATTaGAGGTCCTATACTCAGATGGCAGACTCCGGAACC +
Preference number: 3 (lower is better)
Translates to: IQRPYSPVSGDY*RSYTQMADSGT
Trigger: GGTTCCGGAGTCTGCCATCTGAGTATAGGACCTCCAATAGTCCCCACTCACAGGGCTATAGGGGCGTTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR CCA 72 bp TGCCCAGTGTCTTCACACCCTGCCAGCCACATCCTCTaGGACAGACCTCAAAACCCTGCTAAGTTAGCAGAA +
Preference number: 3 (lower is better)
Translates to: CPVSSHPASHIL*DRPQNPAKLAE
Trigger: TTCTGCTAACTTAGCAGGGTTTTGAGGTCTGTCCCAGAGGATGTGGCTGGCAGGGTGTGAAGACACTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR CCA 72 bp TGTTCCGCTGCTTGTCAGCCTTCTCCACATTGGTGCTaGAGAAGTCCAACCAGTCTTCCAGACTCACGGAGT +
Preference number: 3 (lower is better)
Translates to: CSAACQPSPHWC*RSPTSLPDSRS
Trigger: ACTCCGTGAGTCTGGAAGACTGGTTGGACTTCTCCAGCACCAATGTGGAGAAGGCTGACAAGCAGCGGAACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR CCA 72 bp GGGAGTTGTTCCGCTGCTTGTCAGCCTTCTCCACATTaGTGCTGGAGAAGTCCAACCAGTCTTCCAGACTCA +
Preference number: 3 (lower is better)
Translates to: GSCSAACQPSPH*CWRSPTSLPDS
Trigger: TGAGTCTGGAAGACTGGTTGGACTTCTCCAGCACCAATGTGGAGAAGGCTGACAAGCAGCGGAACAACTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR CCA 72 bp ACCACATCACACTGCTTGCGCAGATCATTGGCTGTCTaGGACAGGATTCGATCCACCAGGGCTTTCAGCATC +
Preference number: 3 (lower is better)
Translates to: TTSHCLRRSLAV*DRIRSTRAFSI
Trigger: GATGCTGAAAGCCCTGGTGGATCGAATCCTGTCCCAGACAGCCAATGATCTGCGCAAGCAGTGTGATGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR TCA 72 bp ACGGAGGTGATCTCATTCAACGCCCCTATAGCCCTGTaGGTGGGGACTATTGGAGGTCCTATACTCAGATGG +
Preference number: 3 (lower is better)
Translates to: TEVISFNAPIAL*VGTIGGPILRW
Trigger: CCATCTGAGTATAGGACCTCCAATAGTCCCCACTCACAGGGCTATAGGGGCGTTGAATGAGATCACCTCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR TCA 72 bp CCTGCTAAGTTAGCAGAAACTCTGAGGTCTGCCCAGTaGGCTGGGAAGGCTTATTTGGACTCTTCCGAGCCA +
Preference number: 3 (lower is better)
Translates to: PAKLAETLRSAQ*AGKAYLDSSEP
Trigger: TGGCTCGGAAGAGTCCAAATAAGCCTTCCCAGCTCACTGGGCAGACCTCAGAGTTTCTGCTAACTTAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR TCA 72 bp TGTCCCTGGCATCCTTTGTATCCTTCAGCCCATTCTTaGATGCCGTGTCCACCACATCACACTGCTTGCGCA +
Preference number: 3 (lower is better)
Translates to: CPWHPLYPSAHS*MPCPPHHTACA
Trigger: TGCGCAAGCAGTGTGATGTGGTGGACACGGCATTCAAGAATGGGCTGAAGGATACAAAGGATGCCAGGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR TCA 72 bp GCAAGCTGTCTGCGATGCAGCCCTTTCAGCTCTGCCTaGGCTTGGGCTAAAGTTTCCTTCAATCTTGCGACA +
Preference number: 3 (lower is better)
Translates to: ASCLRCSPFSSA*AWAKVSFNLAT
Trigger: TGTCGCAAGATTGAAGGAAACTTTAGCCCAAGCTCAGGCAGAGCTGAAAGGGCTGCATCGCAGACAGCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR GCA 72 bp AGCCCATTCTTGAATGCCGTGTCCACCACATCACACTaGTTGCGCAGATCATTGGCTGTCTGGGACAGGATT +
Preference number: 3 (lower is better)
Translates to: SPFLNAVSTTSH*LRRSLAVWDRI
Trigger: AATCCTGTCCCAGACAGCCAATGATCTGCGCAAGCAGTGTGATGTGGTGGACACGGCATTCAAGAATGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR GCA 72 bp CCTGGCATCCTTTGTATCCTTCAGCCCATTCTTGAATaGCGTGTCCACCACATCACACTGCTTGCGCAGATC +
Preference number: 3 (lower is better)
Translates to: PGILCILQPILE*RVHHITLLAQI
Trigger: GATCTGCGCAAGCAGTGTGATGTGGTGGACACGGCATTCAAGAATGGGCTGAAGGATACAAAGGATGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR-3UTR CAA 90 bp GCTGGGAAGGCTTATTTGGACTCTTCCGAGCCAGAGCAGAAAAGCACCCAGAGGGCAGCCTCCCACAAGTaGAACTCTTTTTGGAAAAGA +
Preference number: 3 (lower is better)
Translates to: AGKAYLDSSEPEQKSTQRAASHK*NSFWKR
Trigger: TCTTTTCCAAAAAGAGTTCAACTTGTGGGAGGCTGC...CCTCTGGGTGCTTTTCTGCTCTGGCTCGGAAGAGTCCAAATAAGCCTTCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR TCA 72 bp TGCAGCAGGCTGGCTAGAGGCCCCGCCAGCCTGAAATaGGAGCTCTGTACTACTGTAACTACTGTTTACAAT +
Preference number: 3 (lower is better)
Translates to: CSRLARGPASLK*ELCTTVTTVYN
Trigger: ATTGTAAACAGTAGTTACAGTAGTACAGAGCTCTCATTTCAGGCTGGCGGGGCCTCTAGCCAGCCTGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338694.7
ENST00000575592.1
3UTR CCA 72 bp GCTTTTGGCCTCAAAGGGGGTTTCTCCATCCCAGATTaGGAACATCCCTTTCTGATGGCAAAGAGTCTCTGG +
Preference number: 3 (lower is better)
Translates to: AFGLKGGFSIPD*EHPFLMAKSLW
Trigger: CCAGAGACTCTTTGCCATCAGAAAGGGATGTTCCCAATCTGGGATGGAGAAACCCCCTTTGAGGCCAAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR CAA 90 bp TGGGACAGACCTCAAAACCCTGCTAAGTTAGCAGAAACTCTGAGGTCTGCCCAGCAAGGAGCACCTAGATaGCAAAGCTCCCAGGAATTA +
Preference number: 3 (lower is better)
Translates to: WDRPQNPAKLAETLRSAQQGAPR*QSSQEL
Trigger: TAATTCCTGGGAGCTTTGCAATCTAGGTGCTCCTTG...CTGGGCAGACCTCAGAGTTTCTGCTAACTTAGCAGGGTTTTGAGGTCTGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR CAA 90 bp CCATTCTTGAATGCCGTGTCCACCACATCACACTGCTTGCGCAGATCATTGGCTTTCTCAAGATTGTACTaGGCAGAGCGGTTCATCCGA +
Preference number: 3 (lower is better)
Translates to: PFLNAVSTTSHCLRRSLAFSRLY*AERFIR
Trigger: TCGGATGAACCGCTCTGCCAAGTACAATCTTGAGAA...AGCCAATGATCTGCGCAAGCAGTGTGATGTGGTGGACACGGCATTCAAGAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR-3UTR CAA 90 bp CCATTCTTGAATGCCGTGTCCACCACATCACACTGCTTGCGCAGATCATTGGCTCTGATGTTTGGTGAGTaGTTGTTGAGCGAGAAGCAG +
Preference number: 3 (lower is better)
Translates to: PFLNAVSTTSHCLRRSLALMFGE*LLSEKQ
Trigger: CTGCTTCTCGCTCAACAACAACTCACCAAACATCAG...AGCCAATGATCTGCGCAAGCAGTGTGATGTGGTGGACACGGCATTCAAGAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR-3UTR CAA 90 bp CACAAATATGCTGAGACCGGGTCTGTGATGTTGAACATAGATGTGAATGGCCAACCCCAAACCTGGCTTTaGGAGCCAGGTGTCTGGATG +
Preference number: 3 (lower is better)
Translates to: HKYAETGSVMLNIDVNGQPQTWL*EPGVWM
Trigger: CATCCAGACACCTGGCTCCAAAAGCCAGGTTTGGGG...TTGGCCATTCACATCTATGTTCAACATCACAGACCCGGTCTCAGCATATTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571744.1
3UTR CCA 72 bp GCTGAGCACTCTGAGAGGAGACGTTCAGCACTGGGGTaGCATAGATCAGAATTAACAGAATTAAGCCAGTGC +
Preference number: 3 (lower is better)
Translates to: AEHSERRRSALG*HRSELTELSQC
Trigger: GCACTGGCTTAATTCTGTTAATTCTGATCTATGCCACCCCAGTGCTGAACGTCTCCTCTCAGAGTGCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR CAA 90 bp AGATCATTGGCTGTCTGGGACAGGATTCGATCCACCAGGGCTTTCAGCATCAGGATGTTTGGTGAGTTGTaGTTGAGCGAGAAGCAGATA +
Preference number: 3 (lower is better)
Translates to: RSLAVWDRIRSTRAFSIRMFGEL*LSEKQI
Trigger: TATCTGCTTCTCGCTCAACAACAACTCACCAAACAT...CCTGATGCTGAAAGCCCTGGTGGATCGAATCCTGTCCCAGACAGCCAATGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR-3UTR CAA 90 bp CCACATCACACTGCTTGCGCAGATCATTGGCTGTCTGGGACAGGATTCGATCCAAAATATGGAGTTGAATaGTTAGGCAAACACCACACC +
Preference number: 3 (lower is better)
Translates to: PHHTACADHWLSGTGFDPKYGVE*LGKHHT
Trigger: GGTGTGGTGTTTGCCTAACAATTCAACTCCATATTT...TGGATCGAATCCTGTCCCAGACAGCCAATGATCTGCGCAAGCAGTGTGATGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR-3UTR CAA 90 bp GAATTAGGCCCACACTCTGCATTATCATTGTGCCCTATGACACCGTATGTGCAGACTTTCCTGGCAGTGTaGCAACTAGAAGCTAGGTCT +
Preference number: 3 (lower is better)
Translates to: ELGPHSALSLCPMTPYVQTFLAV*QLEARS
Trigger: AGACCTAGCTTCTAGTTGCAACACTGCCAGGAAAGT...CTGCACATACGGTGTCATAGGGCACAATGATAATGCAGAGTGTGGGCCTAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR CAA 90 bp TGGGAGGGTGCTGAGATGGTAAGCCTCGTCCATGGAAAGTGTTCCTTCAATGTTAGCAAATGTCTTCCTTaGACAGTCACCCACATAGAT +
Preference number: 3 (lower is better)
Translates to: WEGAEMVSLVHGKCSFNVSKCLP*TVTHID
Trigger: ATCTATGTGGGTGACTGTCAAAGGAAGACATTTGCT...AACATTGAAGGAACACTTTCCATGGACGAGGCTTACCATCTCAGCACCCTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR GCA 72 bp GGGTGGCATAGATCAGAATTAACAGAATTAAGCCAGTaGTTTTGGCCTCAAAGGGGGTTTCTCCATCCCAGA +
Preference number: 3 (lower is better)
Translates to: GWHRSELTELSQ*FWPQRGFLHPR
Trigger: TCTGGGATGGAGAAACCCCCTTTGAGGCCAAAAGCACTGGCTTAATTCTGTTAATTCTGATCTATGCCACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR CCA 72 bp CAAACTTGTCCTTCAAATCCTTCTCAAGATTGTACTTaGCAGAGCGGTTCATCCGAATCTGCTCGGAAGCCT +
Preference number: 3 (lower is better)
Translates to: QTCPSNPSQDCT*QSGSSESARKP
Trigger: AGGCTTCCGAGCAGATTCGGATGAACCGCTCTGCCAAGTACAATCTTGAGAAGGATTTGAAGGACAAGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR-3UTR CAA 90 bp TCTCCTTTATTTTTCCACAAATATGCTGAGACCGGGTCTGTGATGTTGAACATATGGCCTGCCATGAACTaGTCTTGTGCCTTGGGGCAA +
Preference number: 3 (lower is better)
Translates to: SPLFFHKYAETGSVMLNIWPAMN*SCALGQ
Trigger: TTGCCCCAAGGCACAAGACAAGTTCATGGCAGGCCA...TATGTTCAACATCACAGACCCGGTCTCAGCATATTTGTGGAAAAATAAAGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571744.1
3UTR TCA 72 bp ATTTCCCTTAAAAGCAGCATGTTCCAGACACTGTGTTaGGAGTCTTCCACACGTTATCTCGCCAATCTAGGC +
Preference number: 3 (lower is better)
Translates to: ISLKSSMFQTLC*ESSTRYLANLG
Trigger: GCCTAGATTGGCGAGATAACGTGTGGAAGACTCTCAACACAGTGTCTGGAACATGCTGCTTTTAAGGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR CAA 90 bp TCTCCTTTATTTTTCCACAAATATGCTGAGACCGGGTCTGTGATGTTGAACATATGTGAATGGCCAAGTTaGATGGCCCCAAACCTGGCT +
Preference number: 3 (lower is better)
Translates to: SPLFFHKYAETGSVMLNICEWPS*MAPNLA
Trigger: AGCCAGGTTTGGGGCCATCAAACTTGGCCATTCACA...TATGTTCAACATCACAGACCCGGTCTCAGCATATTTGTGGAAAAATAAAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571744.1
3UTR TCA 72 bp ATCCAGCCCAACTACTTTATTGAATTGAATCTGAACTaGAATGTCTTGAAACCCTGTCCTGGGGCCCCAAGT +
Preference number: 3 (lower is better)
Translates to: IQPNYFIELNLN*NVLKPCPGAPS
Trigger: ACTTGGGGCCCCAGGACAGGGTTTCAAGACATTTCAGTTCAGATTCAATTCAATAAAGTAGTTGGGCTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338694.7
ENST00000575592.1
3UTR TCA 72 bp CTAGGCTTTATTAGTCTTATTTACAGATTAGGCAACTaGAGCTCGGGGAAGTTGAGTAACTTGGCGGGGATC +
Preference number: 3 (lower is better)
Translates to: LGFISLIYRLGN*SSGKLSNLAGI
Trigger: GATCCCCGCCAAGTTACTCAACTTCCCCGAGCTTCAGTTGCCTAATCTGTAAATAAGACTAATAAAGCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR CCA 72 bp CATAGATCAGAATTAACAGAATTAAGCCAGTGCTTTTaGCCTCAAAGGGGGTTTCTCCATCCCAGATTGGGA +
Preference number: 3 (lower is better)
Translates to: HRSELTELSQCF*PQRGFLHPRLG
Trigger: TCCCAATCTGGGATGGAGAAACCCCCTTTGAGGCCAAAAGCACTGGCTTAATTCTGTTAATTCTGATCTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR CAA 90 bp GGATGGATTTCCTCATCTGCATACACAGCACTTCGTCGATATAAATGGTGTTCTAAATCCTTCTCAAGATaGTACTTGGCAGAGCGGTTC +
Preference number: 3 (lower is better)
Translates to: GWISSSAYTALRRYKWCSKSFSR*YLAERF
Trigger: GAACCGCTCTGCCAAGTACAATCTTGAGAAGGATTT...AGAACACCATTTATATCGACGAAGTGCTGTGTATGCAGATGAGGAAATCCATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR TCA 72 bp GTTTCCTTCAATCTTGCGACATTGTGGGTGATCTCTTaGACCTCCTTCATTAGCCTATATTGTGCGACATCA +
Preference number: 3 (lower is better)
Translates to: VSFNLATLWVIS*TSFISLYCATS
Trigger: TGATGTCGCACAATATAGGCTAATGAAGGAGGTTCAAGAGATCACCCACAATGTCGCAAGATTGAAGGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR TCA 72 bp AATCCTCACGGCGTTCTCAGAATATCTGATGTTTGGTaGGTTGTTGTTGAGCGAGAAGCAGATATCATCTAT +
Preference number: 3 (lower is better)
Translates to: NPHGVLRISDVW*VVVEREADIIY
Trigger: ATAGATGATATCTGCTTCTCGCTCAACAACAACTCACCAAACATCAGATATTCTGAGAACGCCGTGAGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR CCA 72 bp GTTTATGCCATGAGTACAATTGTGCAGAAATTATGTTaGTATAGGGTGGGACTGCTCACAATGGCTCACATT +
Preference number: 3 (lower is better)
Translates to: VYAMSTIVQKLC*YRVGLLTMAHI
Trigger: AATGTGAGCCATTGTGAGCAGTCCCACCCTATACCAACATAATTTCTGCACAATTGTACTCATGGCATAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR-3UTR CAA 90 bp GTAAGCCTCGTCCATGGAAAGTGTTCCTTCAATGTTAGCGGAATAAGGAACAAAAAATATGGAGTTGAATaGTTAGGCAAACACCACACC +
Preference number: 3 (lower is better)
Translates to: VSLVHGKCSFNVSGIRNKKYGVE*LGKHHT
Trigger: GGTGTGGTGTTTGCCTAACAATTCAACTCCATATTT...TTTGTTCCTTATTCCGCTAACATTGAAGGAACACTTTCCATGGACGAGGCTTAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR TCA 72 bp GATATTGTAAGAGTGGCCTGTGCTAAAATATGGAGTTaGATTGTTAGGCAAACACCACACCAGCATAAGAGA +
Preference number: 3 (lower is better)
Translates to: DIVRVACAKIWS*IVRQTPHQHKR
Trigger: TCTCTTATGCTGGTGTGGTGTTTGCCTAACAATTCAACTCCATATTTTAGCACAGGCCACTCTTACAATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338694.7
ENST00000575592.1
CDS-3UTR TCA 90 bp TTGGCAGAGCGGTTCATCCGAATCTGCTCGGAAGCCTCCTCCAAGGTACGGGTCGTCTCCAAGCGCGTATaGGCCACCTTGGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LAERFIRICSEASSKVRVVSKRV*ATLAGP
Trigger: AGGGCCAGCCAAGGTGGCTCATACGCGCTTGGAGAC...GACCCGTACCTTGGAGGAGGCTTCCGAGCAGATTCGGATGAACCGCTCTGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR TCA 90 bp CTGGCAGTGTTGCAACTAGAAGCTAGGTCTCCTGAGCCCCACACCGTCAGCTGTTGCGACCAGGCGTTCTaGTCGGGACCTTTGAGCGTC +
Preference number: 4 (lower is better)
Translates to: LAVLQLEARSPEPHTVSCCDQAF*SGPLSV
Trigger: GACGCTCAAAGGTCCCGATCAGAACGCCTGGTCGCA...ACAGCTGACGGTGTGGGGCTCAGGAGACCTAGCTTCTAGTTGCAACACTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp TTCACAAGGAAGGATTTTGCCCAGTGTCTTCACACCCTGCCAGCCACATCCTCTGAGGTTGCAGCAGGCTaGCTAGAGGCCCCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: FTRKDFAQCLHTLPATSSEVAAG*LEAPPA
Trigger: GGCTGGCGGGGCCTCTAGCCAGCCTGCTGCAACCTC...AGAGGATGTGGCTGGCAGGGTGTGAAGACACTGGGCAAAATCCTTCCTTGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp ACCAGTCTTCCAGACTCACGGAGTTTGGCTCAATCCTCACGGCGTTCTCAGAATGAGGTTGCAGCAGGCTaGCTAGAGGCCCCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TSLPDSRSLAQSSRRSQNEVAAG*LEAPPA
Trigger: GGCTGGCGGGGCCTCTAGCCAGCCTGCTGCAACCTC...ATTCTGAGAACGCCGTGAGGATTGAGCCAAACTCCGTGAGTCTGGAAGACTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR GCA 90 bp ATCACATCTCCCTGCAGAGCCTGGGATCTGAATCCACCACTGAGGCTGGCTGCCCGGTTCATCCGAATCTaGTCGGAAGCCTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: ITSPCRAWDLNPPLRLAARFIRI*SEASSK
Trigger: CTTGGAGGAGGCTTCCGAGCAGATTCGGATGAACCG...GGCAGCCAGCCTCAGTGGTGGATTCAGATCCCAGGCTCTGCAGGGAGATGTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp GCCCAGACCCCATGGTCTTCCCCATCCCGAAGTGGGATGGATTTCCTCATCTGCCGGTTCATCCGAATCTaGTCGGAAGCCTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: AQTPWSSPSRSGMDFLICRFIRI*SEASSK
Trigger: CTTGGAGGAGGCTTCCGAGCAGATTCGGATGAACCG...GCAGATGAGGAAATCCATCCCACTTCGGGATGGGGAAGACCATGGGGTCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR GCA 90 bp GCCTGGGATCTGAATCCACCACTGAGGCTGGCTGCCTCTGAGAGCTGTATTCACGCAAGCTGTCTGCGATaGAGCCCTTTCAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: AWDLNPPLRLAASESCIHASCLR*SPFSSA
Trigger: GGCAGAGCTGAAAGGGCTGCATCGCAGACAGCTTGC...GTGAATACAGCTCTCAGAGGCAGCCAGCCTCAGTGGTGGATTCAGATCCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR CAA 72 bp GCCGTGTCCACCACATCACACTGCTTGCGCAGATCATaGGCTGTCTGGGACAGGATTCGATCCACCAGGGCT +
Preference number: 4 (lower is better)
Translates to: AVSTTSHCLRRS*AVWDRIRSTRA
Trigger: AGCCCTGGTGGATCGAATCCTGTCCCAGACAGCCAATGATCTGCGCAAGCAGTGTGATGTGGTGGACACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR TCA 90 bp ATCACATCTCCCTGCAGAGCCTGGGATCTGAATCCACCACTGAGGCTGGCTGCCCCTTCAGCCCATTCTTaGATGCCGTGTCCACCACAT +
Preference number: 4 (lower is better)
Translates to: ITSPCRAWDLNPPLRLAAPSAHS*MPCPPH
Trigger: ATGTGGTGGACACGGCATTCAAGAATGGGCTGAAGG...GGCAGCCAGCCTCAGTGGTGGATTCAGATCCCAGGCTCTGCAGGGAGATGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR TCA 90 bp GCTGGGAAGGCTTATTTGGACTCTTCCGAGCCAGAGCAGAAAAGCACCCAGAGGGAGGCCCCGCCAGCCTaGAATGAGAGCTCTGTACTA +
Preference number: 4 (lower is better)
Translates to: AGKAYLDSSEPEQKSTQREAPPA*NESSVL
Trigger: TAGTACAGAGCTCTCATTTCAGGCTGGCGGGGCCTC...CCTCTGGGTGCTTTTCTGCTCTGGCTCGGAAGAGTCCAAATAAGCCTTCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR TCA 90 bp ATTTGGACTCTTCCGAGCCAGAGCAGAAAAGCACCCAGAGGCTTCCCAGTGAGCCCAAAATCAGCCCCCTaGGCAGGCTTGGAATGCCAG +
Preference number: 4 (lower is better)
Translates to: IWTLPSQSRKAPRGFPVSPKSAP*AGLECQ
Trigger: CTGGCATTCCAAGCCTGCTCAGGGGGCTGATTTTGG...GCTCACTGGGAAGCCTCTGGGTGCTTTTCTGCTCTGGCTCGGAAGAGTCCAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp CGCCCCTATAGCCCTGTGAGTGGGGACTATTGGAGGTCCTATACTCAGATGGCAGCAGGGCAAGCTGTCTaGGATGCAGCCCTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: RPYSPVSGDYWRSYTQMAAGQAV*DAALSA
Trigger: AGCTGAAAGGGCTGCATCGCAGACAGCTTGCCCTGC...TGCCATCTGAGTATAGGACCTCCAATAGTCCCCACTCACAGGGCTATAGGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp CCACATCACACTGCTTGCGCAGATCATTGGCTGTCTGGGACAGGATTCGATCCATGCCAGCCAAGAGGTTaGAGCAGGCTGGCTAGAGGC +
Preference number: 4 (lower is better)
Translates to: PHHTACADHWLSGTGFDPCQPRG*SRLARG
Trigger: GCCTCTAGCCAGCCTGCTGCAACCTCTTGGCTGGCA...TGGATCGAATCCTGTCCCAGACAGCCAATGATCTGCGCAAGCAGTGTGATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CCA 90 bp GCCTGGGATCTGAATCCACCACTGAGGCTGGCTGCCTCTGAGAGCTGTATTCACCCTCCTTACCCCAACTaGAGCTTCCAGCTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: AWDLNPPLRLAASESCIHPPYPN*SFQLLQ
Trigger: CTGCAAGAGCTGGAAGCTCCAGTTGGGGTAAGGAGG...GTGAATACAGCTCTCAGAGGCAGCCAGCCTCAGTGGTGGATTCAGATCCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp GAATTGGAACTAGCCCTACTATTAGCAGACAGCATCAGGGCGGAGGCCCCCAGCTCATCCACAAGCCTCTaGCTTTCTGCGACCAGGCGT +
Preference number: 4 (lower is better)
Translates to: ELELALLLADSIRAEAPSSSTSL*LSATRR
Trigger: ACGCCTGGTCGCAGAAAGCCAGAGGCTTGTGGATGA...GCTGGGGGCCTCCGCCCTGATGCTGTCTGCTAATAGTAGGGCTAGTTCCAATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CCA 90 bp GAATTGGAACTAGCCCTACTATTAGCAGACAGCATCAGGGCGGAGGCCCCCAGCGCGTATGAGCCACCTTaGCTGGCCCTTCTTGGTCAA +
Preference number: 4 (lower is better)
Translates to: ELELALLLADSIRAEAPSAYEPP*LALLGQ
Trigger: TTGACCAAGAAGGGCCAGCCAAGGTGGCTCATACGC...GCTGGGGGCCTCCGCCCTGATGCTGTCTGCTAATAGTAGGGCTAGTTCCAATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR GCA 90 bp GAGCGGTTCATCCGAATCTGCTCGGAAGCCTCCTCCAAGGTACGGGTCAGCAGACCTTCTCCACATTGGTaGTGGAGAAGTCCAACCAGT +
Preference number: 4 (lower is better)
Translates to: ERFIRICSEASSKVRVSRPSPHW*WRSPTS
Trigger: ACTGGTTGGACTTCTCCAGCACCAATGTGGAGAAGG...TCTGCTGACCCGTACCTTGGAGGAGGCTTCCGAGCAGATTCGGATGAACCGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR GCA 90 bp ATCACATCTCCCTGCAGAGCCTGGGATCTGAATCCACCACTGAGGCTGGCTGCCCCACATCACACTGCTTaGGCAGATCATTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: ITSPCRAWDLNPPLRLAAPHHTA*ADHWLS
Trigger: AGACAGCCAATGATCTGCGCAAGCAGTGTGATGTGG...GGCAGCCAGCCTCAGTGGTGGATTCAGATCCCAGGCTCTGCAGGGAGATGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp ACAGGATTCGATCCACCAGGGCTTTCAGCATCAGGGAGTTGTTCCGCTGCTTGTGCAAGCTGTCTGCGATaGAGCCCTTTCAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: TGFDPPGLSASGSCSAACASCLR*SPFSSA
Trigger: GGCAGAGCTGAAAGGGCTGCATCGCAGACAGCTTGC...ACAAGCAGCGGAACAACTCCCTGATGCTGAAAGCCCTGGTGGATCGAATCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR GCA 90 bp GATCCACCAGCTGATCTGAATCACATCTCCCTGCAGAGCCTGGGATCTGAATCCACCTGGATCTCCTCCTaGAGGGCAAGCTGTCTGCGA +
Preference number: 4 (lower is better)
Translates to: DPPADLNHISLQSLGSESTWISS*RASCLR
Trigger: TCGCAGACAGCTTGCCCTGCAGGAGGAGATCCAGGT...GGATTCAGATCCCAGGCTCTGCAGGGAGATGTGATTCAGATCAGCTGGTGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp CGCCCCTATAGCCCTGTGAGTGGGGACTATTGGAGGTCCTATACTCAGATGGCAAGAAACTCTGAGGTCTaGCCAGTGAGCTGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: RPYSPVSGDYWRSYTQMARNSEV*PVSWEG
Trigger: GCCTTCCCAGCTCACTGGGCAGACCTCAGAGTTTCT...TGCCATCTGAGTATAGGACCTCCAATAGTCCCCACTCACAGGGCTATAGGGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp AGATCATTGGCTGTCTGGGACAGGATTCGATCCACCAGGGCTTTCAGCATCAGGTACGCAAGCTCGGGATaGGAGCCTCCTTACCCCAAC +
Preference number: 4 (lower is better)
Translates to: RSLAVWDRIRSTRAFSIRYASSG*EPPYPN
Trigger: GTTGGGGTAAGGAGGCTCCCATCCCGAGCTTGCGTA...CCTGATGCTGAAAGCCCTGGTGGATCGAATCCTGTCCCAGACAGCCAATGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CCA 90 bp CTCGGAAGCCTCCTCCAAGGTACGGGTCAGCAGAGCCATAATGCCCTGGATGATGTGTTCTCTTTGACCTaGATCTCCTCCTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LGSLLQGTGQQSHNALDDVFSLT*ISSCRA
Trigger: TGCCCTGCAGGAGGAGATCCAGGTCAAAGAGAACAC...ATCATCCAGGGCATTATGGCTCTGCTGACCCGTACCTTGGAGGAGGCTTCCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CCA 90 bp GAGCGGTTCATCCGAATCTGCTCGGAAGCCTCCTCCAAGGTACGGGTCAGCAGATTCCCCATCCCGAAGTaGGATGGATTTCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: ERFIRICSEASSKVRVSRFPIPK*DGFPHL
Trigger: CAGATGAGGAAATCCATCCCACTTCGGGATGGGGAA...TCTGCTGACCCGTACCTTGGAGGAGGCTTCCGAGCAGATTCGGATGAACCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CCA 90 bp CTGGCAGTGTTGCAACTAGAAGCTAGGTCTCCTGAGCCCCACACCGTCAGCTGTCAGCAGCTTCACACATaGGAGGGTGCTGAGATGGTA +
Preference number: 4 (lower is better)
Translates to: LAVLQLEARSPEPHTVSCQQLHT*EGAEMV
Trigger: TACCATCTCAGCACCCTCCCATGTGTGAAGCTGCTG...ACAGCTGACGGTGTGGGGCTCAGGAGACCTAGCTTCTAGTTGCAACACTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR CAA 72 bp ACCAGGGCTTTCAGCATCAGGGAGTTGTTCCGCTGCTaGTCAGCCTTCTCCACATTGGTGCTGGAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: TRAFSIRELFRC*SAFSTLVLEKS
Trigger: GGACTTCTCCAGCACCAATGTGGAGAAGGCTGACAAGCAGCGGAACAACTCCCTGATGCTGAAAGCCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR TCA 90 bp AGATCATTGGCTGTCTGGGACAGGATTCGATCCACCAGGGCTTTCAGCATCAGGATGACCTTGGCCAGATaGTCAGCCAGCTTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: RSLAVWDRIRSTRAFSIRMTLAR*SASLSL
Trigger: CAGGGACAAGCTGGCTGATCATCTGGCCAAGGTCAT...CCTGATGCTGAAAGCCCTGGTGGATCGAATCCTGTCCCAGACAGCCAATGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR TCA 90 bp CTAGACAGCCAGATTCAGGGAACAGCAAGGACAGGAAGAGTTCCAGACGATATAGTCTCCAAGCGCGTATaGGCCACCTTGGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LDSQIQGTARTGRVPDDIVSKRV*ATLAGP
Trigger: AGGGCCAGCCAAGGTGGCTCATACGCGCTTGGAGAC...TATATCGTCTGGAACTCTTCCTGTCCTTGCTGTTCCCTGAATCTGGCTGTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR TCA 90 bp GCAGCTCAGCGGAAGGCAGCCTCCCACAAGTTGAACTCTTTTTGGAAAAGAAACGCCTCCCTCCTTGATTaGGGCATGGGAAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: AAQRKAASHKLNSFWKRNASLLD*GMGRAV
Trigger: CACAGCCCTTCCCATGCCTCAATCAAGGAGGGAGGC...GTTTCTTTTCCAAAAAGAGTTCAACTTGTGGGAGGCTGCCTTCCGCTGAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp TGGCCTCAAAGGGGGTTTCTCCATCCCAGATTGGGAACATCCCTTTCTGATGGCCGTGCACCAGGTCAATaGCAATGCGCTTCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: WPQRGFLHPRLGTSLSDGRAPGQ*QCASPC
Trigger: ACAGGGAGAAGCGCATTGGCATTGACCTGGTGCACG...GCCATCAGAAAGGGATGTTCCCAATCTGGGATGGAGAAACCCCCTTTGAGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp CTGGCAGTGTTGCAACTAGAAGCTAGGTCTCCTGAGCCCCACACCGTCAGCTGTCCTTCTCCACATTGGTaGTGGAGAAGTCCAACCAGT +
Preference number: 4 (lower is better)
Translates to: LAVLQLEARSPEPHTVSCPSPHW*WRSPTS
Trigger: ACTGGTTGGACTTCTCCAGCACCAATGTGGAGAAGG...ACAGCTGACGGTGTGGGGCTCAGGAGACCTAGCTTCTAGTTGCAACACTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp TTTCTGATGGCAAAGAGTCTCTGGACCAAGGAGCACCTAGATTGCAAAGCTCCCTGCCAGCCAAGAGGTTaGAGCAGGCTGGCTAGAGGC +
Preference number: 4 (lower is better)
Translates to: FLMAKSLWTKEHLDCKAPCQPRG*SRLARG
Trigger: GCCTCTAGCCAGCCTGCTGCAACCTCTTGGCTGGCA...GGGAGCTTTGCAATCTAGGTGCTCCTTGGTCCAGAGACTCTTTGCCATCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp ATCACATCTCCCTGCAGAGCCTGGGATCTGAATCCACCACTGAGGCTGGCTGCCGTGAGTGGGGACTATTaGAGGTCCTATACTCAGATG +
Preference number: 4 (lower is better)
Translates to: ITSPCRAWDLNPPLRLAAVSGDY*RSYTQM
Trigger: CATCTGAGTATAGGACCTCCAATAGTCCCCACTCAC...GGCAGCCAGCCTCAGTGGTGGATTCAGATCCCAGGCTCTGCAGGGAGATGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp GCCTGGGATCTGAATCCACCACTGAGGCTGGCTGCCTCTGAGAGCTGTATTCACGGAGACGTTCAGCACTaGGGTGGCATAGATCAGAAT +
Preference number: 4 (lower is better)
Translates to: AWDLNPPLRLAASESCIHGDVQH*GGIDQN
Trigger: ATTCTGATCTATGCCACCCCAGTGCTGAACGTCTCC...GTGAATACAGCTCTCAGAGGCAGCCAGCCTCAGTGGTGGATTCAGATCCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp CGCCCCTATAGCCCTGTGAGTGGGGACTATTGGAGGTCCTATACTCAGATGGCACTGGGAAGGCTTATTTaGACTCTTCCGAGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: RPYSPVSGDYWRSYTQMALGRLI*TLPSQS
Trigger: GCTCTGGCTCGGAAGAGTCCAAATAAGCCTTCCCAG...TGCCATCTGAGTATAGGACCTCCAATAGTCCCCACTCACAGGGCTATAGGGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR CAA 72 bp AGGATTCGATCCACCAGGGCTTTCAGCATCAGGGAGTaGTTCCGCTGCTTGTCAGCCTTCTCCACATTGGTG +
Preference number: 4 (lower is better)
Translates to: RIRSTRAFSIRE*FRCLSAFSTLV
Trigger: CACCAATGTGGAGAAGGCTGACAAGCAGCGGAACAACTCCCTGATGCTGAAAGCCCTGGTGGATCGAATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR TCA 90 bp CCCTTTCTGATGGCAAAGAGTCTCTGGACCAAGGAGCACCTAGATTGCAAAGCTAGCAATGTGCCACTCTaGGGGCAGGAACTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PFLMAKSLWTKEHLDCKASNVPL*GQELGW
Trigger: CCACCCAAGTTCCTGCCCTCAGAGTGGCACATTGCT...AGCTTTGCAATCTAGGTGCTCCTTGGTCCAGAGACTCTTTGCCATCAGAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR TCA 90 bp ATCACATCTCCCTGCAGAGCCTGGGATCTGAATCCACCACTGAGGCTGGCTGCCTTGTGGGTGATCTCTTaGACCTCCTTCATTAGCCTA +
Preference number: 4 (lower is better)
Translates to: ITSPCRAWDLNPPLRLAALWVIS*TSFISL
Trigger: TAGGCTAATGAAGGAGGTTCAAGAGATCACCCACAA...GGCAGCCAGCCTCAGTGGTGGATTCAGATCCCAGGCTCTGCAGGGAGATGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR TCA 90 bp GATCCACCAGCTGATCTGAATCACATCTCCCTGCAGAGCCTGGGATCTGAATCCCCCGCCAGCCTGAAATaGGAGCTCTGTACTACTGTA +
Preference number: 4 (lower is better)
Translates to: DPPADLNHISLQSLGSESPASLK*ELCTTV
Trigger: TACAGTAGTACAGAGCTCTCATTTCAGGCTGGCGGG...GGATTCAGATCCCAGGCTCTGCAGGGAGATGTGATTCAGATCAGCTGGTGGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR TCA 90 bp TGGGAGGGTGCTGAGATGGTAAGCCTCGTCCATGGAAAGTGTTCCTTCAATGTTACCCACATAGATCTCTaGCCTGCTGCAGCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: WEGAEMVSLVHGKCSFNVTHIDL*PAAAQR
Trigger: CCGCTGAGCTGCAGCAGGTCAGAGATCTATGTGGGT...AACATTGAAGGAACACTTTCCATGGACGAGGCTTACCATCTCAGCACCCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp ATCACATCTCCCTGCAGAGCCTGGGATCTGAATCCACCACTGAGGCTGGCTGCCTCATTAAACACTCACTaGCCCATGATACAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: ITSPCRAWDLNPPLRLAASLNTH*PMIQAQ
Trigger: CTGAGCCTGTATCATGGGGCAGTGAGTGTTTAATGA...GGCAGCCAGCCTCAGTGGTGGATTCAGATCCCAGGCTCTGCAGGGAGATGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp TGGGACAGACCTCAAAACCCTGCTAAGTTAGCAGAAACTCTGAGGTCTGCCCAGCATAGATCTCTGACCTaGTGCAGCTCAGCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: WDRPQNPAKLAETLRSAQHRSLT*CSSAEG
Trigger: GCCTTCCGCTGAGCTGCAGCAGGTCAGAGATCTATG...CTGGGCAGACCTCAGAGTTTCTGCTAACTTAGCAGGGTTTTGAGGTCTGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp TTCAGCCCATTCTTGAATGCCGTGTCCACCACATCACACTGCTTGCGCAGATCACCTCCTTACCCCAACTaGAGCTTCCAGCTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: FSPFLNAVSTTSHCLRRSPPYPN*SFQLLQ
Trigger: CTGCAAGAGCTGGAAGCTCCAGTTGGGGTAAGGAGG...TGATCTGCGCAAGCAGTGTGATGTGGTGGACACGGCATTCAAGAATGGGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CCA 90 bp ATCACATCTCCCTGCAGAGCCTGGGATCTGAATCCACCACTGAGGCTGGCTGCCTCTCAAGATTGTACTTaGCAGAGCGGTTCATCCGAA +
Preference number: 4 (lower is better)
Translates to: ITSPCRAWDLNPPLRLAASQDCT*QSGSSE
Trigger: TTCGGATGAACCGCTCTGCCAAGTACAATCTTGAGA...GGCAGCCAGCCTCAGTGGTGGATTCAGATCCCAGGCTCTGCAGGGAGATGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp AGATCATTGGCTGTCTGGGACAGGATTCGATCCACCAGGGCTTTCAGCATCAGGCAGACTCACGGAGTTTaGCTCAATCCTCACGGCGTT +
Preference number: 4 (lower is better)
Translates to: RSLAVWDRIRSTRAFSIRQTHGV*LNPHGV
Trigger: AACGCCGTGAGGATTGAGCCAAACTCCGTGAGTCTG...CCTGATGCTGAAAGCCCTGGTGGATCGAATCCTGTCCCAGACAGCCAATGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CCA 90 bp CCCTTTCTGATGGCAAAGAGTCTCTGGACCAAGGAGCACCTAGATTGCAAAGCTCCCCCTGAGCAGGCTTaGAATGCCAGCCAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: PFLMAKSLWTKEHLDCKAPPEQA*NASQEV
Trigger: AACCTCTTGGCTGGCATTCCAAGCCTGCTCAGGGGG...AGCTTTGCAATCTAGGTGCTCCTTGGTCCAGAGACTCTTTGCCATCAGAAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp ATTTGGACTCTTCCGAGCCAGAGCAGAAAAGCACCCAGAGGCTTCCCAGTGAGCGGTCCTATACTCAGATaGCAGACTCCGGAACCTACA +
Preference number: 4 (lower is better)
Translates to: IWTLPSQSRKAPRGFPVSGPILR*QTPEPT
Trigger: TGTAGGTTCCGGAGTCTGCCATCTGAGTATAGGACC...GCTCACTGGGAAGCCTCTGGGTGCTTTTCTGCTCTGGCTCGGAAGAGTCCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR CAA 72 bp GATGGCAAAGAGTCTCTGGACCAAGGAGCACCTAGATaGCAAAGCTCCCAGGAATTAGGCCCACACTCTGCA +
Preference number: 4 (lower is better)
Translates to: DGKESLDQGAPR*QSSQELGPHSA
Trigger: TGCAGAGTGTGGGCCTAATTCCTGGGAGCTTTGCAATCTAGGTGCTCCTTGGTCCAGAGACTCTTTGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR CAA 72 bp TTGTCCCTGGCATCCTTTGTATCCTTCAGCCCATTCTaGAATGCCGTGTCCACCACATCACACTGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: LSLASFVSFSPF*NAVSTTSHCLR
Trigger: GCGCAAGCAGTGTGATGTGGTGGACACGGCATTCAAGAATGGGCTGAAGGATACAAAGGATGCCAGGGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR TCA 90 bp TTCAGCCCATTCTTGAATGCCGTGTCCACCACATCACACTGCTTGCGCAGATCACCTTTCAGCTCTGCCTaGGCTTGGGCTAAAGTTTCC +
Preference number: 4 (lower is better)
Translates to: FSPFLNAVSTTSHCLRRSPFSSA*AWAKVS
Trigger: GGAAACTTTAGCCCAAGCTCAGGCAGAGCTGAAAGG...TGATCTGCGCAAGCAGTGTGATGTGGTGGACACGGCATTCAAGAATGGGCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR TCA 90 bp TGGCTGTCTGGGACAGGATTCGATCCACCAGGGCTTTCAGCATCAGGGAGTTGTAAATGGTGTTCTCTTTaGCCTGGATCTCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: WLSGTGFDPPGLSASGSCKWCSL*PGSPPA
Trigger: TGCAGGAGGAGATCCAGGTCAAAGAGAACACCATTT...ACAACTCCCTGATGCTGAAAGCCCTGGTGGATCGAATCCTGTCCCAGACAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR TCA 90 bp GCAGCTCAGCGGAAGGCAGCCTCCCACAAGTTGAACTCTTTTTGGAAAAGAAACGGGCCCCAAGTCCTGTaGTATTGTAAGAGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: AAQRKAASHKLNSFWKRNGPQVL*YCKSGL
Trigger: CAGGCCACTCTTACAATATCACAGGACTTGGGGCCC...GTTTCTTTTCCAAAAAGAGTTCAACTTGTGGGAGGCTGCCTTCCGCTGAGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR TCA 90 bp CAGTCTTCCAGACTCACGGAGTTTGGCTCAATCCTCACGGCGTTCTCAGAATATGGGCCCCAAGTCCTGTaGTATTGTAAGAGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: QSSRLTEFGSILTAFSEYGPQVL*YCKSGL
Trigger: CAGGCCACTCTTACAATATCACAGGACTTGGGGCCC...ATATTCTGAGAACGCCGTGAGGATTGAGCCAAACTCCGTGAGTCTGGAAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR GCA 90 bp CCACATCACACTGCTTGCGCAGATCATTGGCTGTCTGGGACAGGATTCGATCCAGGACCTTTGAGCGTCTaGTCTGTGGTACTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: PHHTACADHWLSGTGFDPGPLSV*SVVLVL
Trigger: AAGAACCAGTACCACAGAGCAGACGCTCAAAGGTCC...TGGATCGAATCCTGTCCCAGACAGCCAATGATCTGCGCAAGCAGTGTGATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR GCA 90 bp TGGCCTCAAAGGGGGTTTCTCCATCCCAGATTGGGAACATCCCTTTCTGATGGCTCCTTTATCAGCTCATaGTCCACTGTGTCGTGCACC +
Preference number: 4 (lower is better)
Translates to: WPQRGFLHPRLGTSLSDGSFISS*STVSCT
Trigger: GGTGCACGACACAGTGGAGCATGAGCTGATAAAGGA...GCCATCAGAAAGGGATGTTCCCAATCTGGGATGGAGAAACCCCCTTTGAGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp TGTCTGGATGAGTACTGGCCTGCCATGAACTTGTCTTGTGCCTTGGGGCAAGAAAGGGAGTTGTTCCGCTaGTTGTCAGCCTTCTCCACA +
Preference number: 4 (lower is better)
Translates to: CLDEYWPAMNLSCALGQERELFR*LSAFST
Trigger: TGTGGAGAAGGCTGACAAGCAGCGGAACAACTCCCT...TTCTTGCCCCAAGGCACAAGACAAGTTCATGGCAGGCCAGTACTCATCCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS-3UTR GCA 90 bp CTTCCCCATCCCGAAGTGGGATGGATTTCCTCATCTGCATACACAGCACTTCGTAGGGAGTTGTTCCGCTaGTTGTCAGCCTTCTCCACA +
Preference number: 4 (lower is better)
Translates to: LPHPEVGWISSSAYTALRRELFR*LSAFST
Trigger: TGTGGAGAAGGCTGACAAGCAGCGGAACAACTCCCT...ACGAAGTGCTGTGTATGCAGATGAGGAAATCCATCCCACTTCGGGATGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR GCA 90 bp AGGCCCCGCCAGCCTGAAATGAGAGCTCTGTACTACTGTAACTACTGTTTACAAACCTGGATCTCCTCCTaGAGGGCAAGCTGTCTGCGA +
Preference number: 4 (lower is better)
Translates to: RPRQPEMRALYYCNYCLQTWISS*RASCLR
Trigger: TCGCAGACAGCTTGCCCTGCAGGAGGAGATCCAGGT...TTGTAAACAGTAGTTACAGTAGTACAGAGCTCTCATTTCAGGCTGGCGGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338694.7
ENST00000575592.1
CDS-3UTR CCA 90 bp CTAGACAGCCAGATTCAGGGAACAGCAAGGACAGGAAGAGTTCCAGACGATATATACGCAAGCTCGGGATaGGAGCCTCCTTACCCCAAC +
Preference number: 4 (lower is better)
Translates to: LDSQIQGTARTGRVPDDIYASSG*EPPYPN
Trigger: GTTGGGGTAAGGAGGCTCCCATCCCGAGCTTGCGTA...TATATCGTCTGGAACTCTTCCTGTCCTTGCTGTTCCCTGAATCTGGCTGTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp GCCAAGAGAAAGGTTAGCATCCCATCTCATGAGCAAGAGGGGCATGGTCTACACATGAGCCACCTTGGCTaGCCCTTCTTGGTCAAGGAT +
Preference number: 4 (lower is better)
Translates to: AKRKVSIPSHEQEGHGLHMSHLG*PFLVKD
Trigger: ATCCTTGACCAAGAAGGGCCAGCCAAGGTGGCTCAT...GTGTAGACCATGCCCCTCTTGCTCATGAGATGGGATGCTAACCTTTCTCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp CCCTTTCTGATGGCAAAGAGTCTCTGGACCAAGGAGCACCTAGATTGCAAAGCTGCGTATGAGCCACCTTaGCTGGCCCTTCTTGGTCAA +
Preference number: 4 (lower is better)
Translates to: PFLMAKSLWTKEHLDCKAAYEPP*LALLGQ
Trigger: TTGACCAAGAAGGGCCAGCCAAGGTGGCTCATACGC...AGCTTTGCAATCTAGGTGCTCCTTGGTCCAGAGACTCTTTGCCATCAGAAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp CGCCCCTATAGCCCTGTGAGTGGGGACTATTGGAGGTCCTATACTCAGATGGCATATGTTGGTATAGGGTaGGACTGCTCACAATGGCTC +
Preference number: 4 (lower is better)
Translates to: RPYSPVSGDYWRSYTQMAYVGIG*DCSQWL
Trigger: GAGCCATTGTGAGCAGTCCCACCCTATACCAACATA...TGCCATCTGAGTATAGGACCTCCAATAGTCCCCACTCACAGGGCTATAGGGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp TTTCTGATGGCAAAGAGTCTCTGGACCAAGGAGCACCTAGATTGCAAAGCTCCCGCCAGCCACATCCTCTaGGACAGACCTCAAAACCCT +
Preference number: 4 (lower is better)
Translates to: FLMAKSLWTKEHLDCKAPASHIL*DRPQNP
Trigger: AGGGTTTTGAGGTCTGTCCCAGAGGATGTGGCTGGC...GGGAGCTTTGCAATCTAGGTGCTCCTTGGTCCAGAGACTCTTTGCCATCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp CCCTTTCTGATGGCAAAGAGTCTCTGGACCAAGGAGCACCTAGATTGCAAAGCTTCTCCCTGCAGAGCCTaGGATCTGAATCCACCACTG +
Preference number: 4 (lower is better)
Translates to: PFLMAKSLWTKEHLDCKASPCRA*DLNPPL
Trigger: CAGTGGTGGATTCAGATCCCAGGCTCTGCAGGGAGA...AGCTTTGCAATCTAGGTGCTCCTTGGTCCAGAGACTCTTTGCCATCAGAAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR TCA 90 bp TTTGGCTCAATCCTCACGGCGTTCTCAGAATATCTGATGTTTGGTGAGTTGTTGTGCGACCAGGCGTTCTaGTCGGGACCTTTGAGCGTC +
Preference number: 4 (lower is better)
Translates to: FGSILTAFSEYLMFGELLCDQAF*SGPLSV
Trigger: GACGCTCAAAGGTCCCGATCAGAACGCCTGGTCGCA...CAACAACTCACCAAACATCAGATATTCTGAGAACGCCGTGAGGATTGAGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR TCA 90 bp CCACATCACACTGCTTGCGCAGATCATTGGCTGTCTGGGACAGGATTCGATCCAAAGCAATCTCTTCCATaGCCTTGGCCAGATGATCAG +
Preference number: 4 (lower is better)
Translates to: PHHTACADHWLSGTGFDPKQSLP*PWPDDQ
Trigger: CTGATCATCTGGCCAAGGTCATGGAAGAGATTGCTT...TGGATCGAATCCTGTCCCAGACAGCCAATGATCTGCGCAAGCAGTGTGATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR TCA 90 bp CTGGCAGTGTTGCAACTAGAAGCTAGGTCTCCTGAGCCCCACACCGTCAGCTGTCAGCCTCCCACAAGTTaGACTCTTTTTGGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: LAVLQLEARSPEPHTVSCQPPTS*TLFGKE
Trigger: TTCTTTTCCAAAAAGAGTTCAACTTGTGGGAGGCTG...ACAGCTGACGGTGTGGGGCTCAGGAGACCTAGCTTCTAGTTGCAACACTGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp ACAGGATTCGATCCACCAGGGCTTTCAGCATCAGGGAGTTGTTCCGCTGCTTGTTTCTTGTTAGCAATGTaGCACTCTGAGGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: TGFDPPGLSASGSCSAACFLLAM*HSEGRN
Trigger: GTTCCTGCCCTCAGAGTGGCACATTGCTAACAAGAA...ACAAGCAGCGGAACAACTCCCTGATGCTGAAAGCCCTGGTGGATCGAATCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR GCA 90 bp CCATTCTTGAATGCCGTGTCCACCACATCACACTGCTTGCGCAGATCATTGGCTTCCACCACATCACACTaGTTGCGCAGATCATTGGCT +
Preference number: 4 (lower is better)
Translates to: PFLNAVSTTSHCLRRSLASTTSH*LRRSLA
Trigger: AGCCAATGATCTGCGCAAGCAGTGTGATGTGGTGGA...AGCCAATGATCTGCGCAAGCAGTGTGATGTGGTGGACACGGCATTCAAGAATGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR GCA 90 bp TTCAAATCCTTCTCAAGATTGTACTTGGCAGAGCGGTTCATCCGAATCTGCTCGGCAGGGCAAGCTGTCTaGGATGCAGCCCTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: FKSFSRLYLAERFIRICSAGQAV*DAALSA
Trigger: AGCTGAAAGGGCTGCATCGCAGACAGCTTGCCCTGC...CGAGCAGATTCGGATGAACCGCTCTGCCAAGTACAATCTTGAGAAGGATTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CCA 90 bp GATCCACCAGCTGATCTGAATCACATCTCCCTGCAGAGCCTGGGATCTGAATCCAGAGCCATAATGCCCTaGATGATCTCAGCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: DPPADLNHISLQSLGSESRAIMP*MISASF
Trigger: AAAGGAGGCTGAGATCATCCAGGGCATTATGGCTCT...GGATTCAGATCCCAGGCTCTGCAGGGAGATGTGATTCAGATCAGCTGGTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp CCCTTTCTGATGGCAAAGAGTCTCTGGACCAAGGAGCACCTAGATTGCAAAGCTCAGACTCACGGAGTTTaGCTCAATCCTCACGGCGTT +
Preference number: 4 (lower is better)
Translates to: PFLMAKSLWTKEHLDCKAQTHGV*LNPHGV
Trigger: AACGCCGTGAGGATTGAGCCAAACTCCGTGAGTCTG...AGCTTTGCAATCTAGGTGCTCCTTGGTCCAGAGACTCTTTGCCATCAGAAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp CTTCCCCATCCCGAAGTGGGATGGATTTCCTCATCTGCATACACAGCACTTCGTCAGCCAGCTTGTCCCTaGCATCCTTTGTATCCTTCA +
Preference number: 4 (lower is better)
Translates to: LPHPEVGWISSSAYTALRQPACP*HPLYPS
Trigger: TGAAGGATACAAAGGATGCCAGGGACAAGCTGGCTG...ACGAAGTGCTGTGTATGCAGATGAGGAAATCCATCCCACTTCGGGATGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CCA 90 bp TCCTTTCCTTACTTTACAGGTGGTCCTAAAGAAGGAGAGAAACTTTCCTGGCAGTCGGCCGGTGTGTCCTaGTCTCCAAGCGCGTATGAG +
Preference number: 4 (lower is better)
Translates to: SFPYFTGGPKEGEKLSWQSAGVS*SPSAYE
Trigger: CTCATACGCGCTTGGAGACCAGGACACACCGGCCGA...CTGCCAGGAAAGTTTCTCTCCTTCTTTAGGACCACCTGTAAAGTAAGGAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp TTTGGCTCAATCCTCACGGCGTTCTCAGAATATCTGATGTTTGGTGAGTTGTTGTCGGCCGGTGTGTCCTaGTCTCCAAGCGCGTATGAG +
Preference number: 4 (lower is better)
Translates to: FGSILTAFSEYLMFGELLSAGVS*SPSAYE
Trigger: CTCATACGCGCTTGGAGACCAGGACACACCGGCCGA...CAACAACTCACCAAACATCAGATATTCTGAGAACGCCGTGAGGATTGAGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CCA 90 bp CGCCCCTATAGCCCTGTGAGTGGGGACTATTGGAGGTCCTATACTCAGATGGCATTCTCCATCCCAGATTaGGAACATCCCTTTCTGATG +
Preference number: 4 (lower is better)
Translates to: RPYSPVSGDYWRSYTQMAFSIPD*EHPFLM
Trigger: CATCAGAAAGGGATGTTCCCAATCTGGGATGGAGAA...TGCCATCTGAGTATAGGACCTCCAATAGTCCCCACTCACAGGGCTATAGGGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR CAA 72 bp AGCTCCCAGGAATTAGGCCCACACTCTGCATTATCATaGTGCCCTATGACACCGTATGTGCAGCTAGACAGC +
Preference number: 4 (lower is better)
Translates to: SSQELGPHSALS*CPMTPYVQLDS
Trigger: GCTGTCTAGCTGCACATACGGTGTCATAGGGCACAATGATAATGCAGAGTGTGGGCCTAATTCCTGGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR TCA 90 bp TTTGGCTCAATCCTCACGGCGTTCTCAGAATATCTGATGTTTGGTGAGTTGTTGAGCAATGTGCCACTCTaGGGGCAGGAACTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: FGSILTAFSEYLMFGELLSNVPL*GQELGW
Trigger: CCACCCAAGTTCCTGCCCTCAGAGTGGCACATTGCT...CAACAACTCACCAAACATCAGATATTCTGAGAACGCCGTGAGGATTGAGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR TCA 90 bp CGGGTCTGTGATGTTGAACATAGATGTGAATGGCCAAGTTTGATGGCCCCAAACCCTTCAGCCCATTCTTaGATGCCGTGTCCACCACAT +
Preference number: 4 (lower is better)
Translates to: RVCDVEHRCEWPSLMAPNPSAHS*MPCPPH
Trigger: ATGTGGTGGACACGGCATTCAAGAATGGGCTGAAGG...GTTTGGGGCCATCAAACTTGGCCATTCACATCTATGTTCAACATCACAGACCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS-3UTR TCA 90 bp TTCACAAGGAAGGATTTTGCCCAGTGTCTTCACACCCTGCCAGCCACATCCTCTCATGGTCTACACAGGTaGTCCAGCCCAACTACTTTA +
Preference number: 4 (lower is better)
Translates to: FTRKDFAQCLHTLPATSSHGLHR*SSPTTL
Trigger: TAAAGTAGTTGGGCTGGATCACCTGTGTAGACCATG...AGAGGATGTGGCTGGCAGGGTGTGAAGACACTGGGCAAAATCCTTCCTTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp CCCTTTCTGATGGCAAAGAGTCTCTGGACCAAGGAGCACCTAGATTGCAAAGCTGGACCTTTGAGCGTCTaGTCTGTGGTACTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: PFLMAKSLWTKEHLDCKAGPLSV*SVVLVL
Trigger: AAGAACCAGTACCACAGAGCAGACGCTCAAAGGTCC...AGCTTTGCAATCTAGGTGCTCCTTGGTCCAGAGACTCTTTGCCATCAGAAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp ATTTGGACTCTTCCGAGCCAGAGCAGAAAAGCACCCAGAGGCTTCCCAGTGAGCTCTGCATTATCATTGTaGCCTATGACACCGTATGTG +
Preference number: 4 (lower is better)
Translates to: IWTLPSQSRKAPRGFPVSSALSL*PMTPYV
Trigger: CACATACGGTGTCATAGGGCACAATGATAATGCAGA...GCTCACTGGGAAGCCTCTGGGTGCTTTTCTGCTCTGGCTCGGAAGAGTCCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp GCCAAGAGAAAGGTTAGCATCCCATCTCATGAGCAAGAGGGGCATGGTCTACACTCCTTCTTCCAGAACTaGACTTCCTCGAGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: AKRKVSIPSHEQEGHGLHSFFQN*TSSSLC
Trigger: ACAGAGACTCGAGGAAGTCCAGTTCTGGAAGAAGGA...GTGTAGACCATGCCCCTCTTGCTCATGAGATGGGATGCTAACCTTTCTCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp GAATTAGGCCCACACTCTGCATTATCATTGTGCCCTATGACACCGTATGTGCAGCAGCCTTCTCCACATTaGTGCTGGAGAAGTCCAACC +
Preference number: 4 (lower is better)
Translates to: ELGPHSALSLCPMTPYVQQPSPH*CWRSPT
Trigger: GGTTGGACTTCTCCAGCACCAATGTGGAGAAGGCTG...CTGCACATACGGTGTCATAGGGCACAATGATAATGCAGAGTGTGGGCCTAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp TGGGAGGGTGCTGAGATGGTAAGCCTCGTCCATGGAAAGTGTTCCTTCAATGTTAGATCATTGGCTGTCTaGGACAGGATTCGATCCACC +
Preference number: 4 (lower is better)
Translates to: WEGAEMVSLVHGKCSFNVRSLAV*DRIRST
Trigger: GGTGGATCGAATCCTGTCCCAGACAGCCAATGATCT...AACATTGAAGGAACACTTTCCATGGACGAGGCTTACCATCTCAGCACCCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp CGGAAGGCAGCCTCCCACAAGTTGAACTCTTTTTGGAAAAGAAACAGTAAGTATCCAGCCCAGACCCCATaGTCTTCCCCATCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: RKAASHKLNSFWKRNSKYPAQTP*SSPSRS
Trigger: ACTTCGGGATGGGGAAGACCATGGGGTCTGGGCTGG...ATACTTACTGTTTCTTTTCCAAAAAGAGTTCAACTTGTGGGAGGCTGCCTTCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp TGTCTGGATGAGTACTGGCCTGCCATGAACTTGTCTTGTGCCTTGGGGCAAGAAAGTTTCAGCTTCTCTTaGCCAGATGATCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: CLDEYWPAMNLSCALGQESFSFS*PDDQPA
Trigger: AGCTGGCTGATCATCTGGCCAAGAGAAGCTGAAACT...TTCTTGCCCCAAGGCACAAGACAAGTTCATGGCAGGCCAGTACTCATCCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS-3UTR CCA 90 bp TGTCTGGATGAGTACTGGCCTGCCATGAACTTGTCTTGTGCCTTGGGGCAAGAATGTCTGGATGAGTACTaGCCTGCCATGAACTTGTCT +
Preference number: 4 (lower is better)
Translates to: CLDEYWPAMNLSCALGQECLDEY*PAMNLS
Trigger: AGACAAGTTCATGGCAGGCCAGTACTCATCCAGACA...TTCTTGCCCCAAGGCACAAGACAAGTTCATGGCAGGCCAGTACTCATCCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571744.1
3UTR CAA 72 bp TGCTTTTGGCCTCAAAGGGGGTTTCTCCATCCCAGATaGGGAACATCCCTTTCTGATGGCAAAGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: CFWPQRGFLHPR*GTSLSDGKESL
Trigger: CAGAGACTCTTTGCCATCAGAAAGGGATGTTCCCAATCTGGGATGGAGAAACCCCCTTTGAGGCCAAAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR TCA 90 bp ATGTTTGGTGAGTTGTTGTTGAGCGAGAAGCAGATATCATCTATGGTCAGGGCCCCTTCAGCCCATTCTTaGATGCCGTGTCCACCACAT +
Preference number: 4 (lower is better)
Translates to: MFGELLLSEKQISSMVRAPSAHS*MPCPPH
Trigger: ATGTGGTGGACACGGCATTCAAGAATGGGCTGAAGG...GGCCCTGACCATAGATGATATCTGCTTCTCGCTCAACAACAACTCACCAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTAAAATATGGAGTTGAATTGTTAGGCAAACACCACACCAGCATAGAGGCCCCGCCAGCCTaGAATGAGAGCTCTGTACTA +
Preference number: 4 (lower is better)
Translates to: WPVLKYGVELLGKHHTSIEAPPA*NESSVL
Trigger: TAGTACAGAGCTCTCATTTCAGGCTGGCGGGGCCTC...TATGCTGGTGTGGTGTTTGCCTAACAATTCAACTCCATATTTTAGCACAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338694.7
ENST00000575592.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTAAAATATGGAGTTGAATTGTTAGGCAAACACCACACCAGCATACCAAAATCAGCCCCCTaGGCAGGCTTGGAATGCCAG +
Preference number: 4 (lower is better)
Translates to: WPVLKYGVELLGKHHTSIPKSAP*AGLECQ
Trigger: CTGGCATTCCAAGCCTGCTCAGGGGGCTGATTTTGG...TATGCTGGTGTGGTGTTTGCCTAACAATTCAACTCCATATTTTAGCACAGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338694.7
ENST00000575592.1
CDS-3UTR TCA 90 bp CTGGCAGTGTTGCAACTAGAAGCTAGGTCTCCTGAGCCCCACACCGTCAGCTGTGCTAAAATATGGAGTTaGATTGTTAGGCAAACACCA +
Preference number: 4 (lower is better)
Translates to: LAVLQLEARSPEPHTVSCAKIWS*IVRQTP
Trigger: TGGTGTTTGCCTAACAATTCAACTCCATATTTTAGC...ACAGCTGACGGTGTGGGGCTCAGGAGACCTAGCTTCTAGTTGCAACACTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR TCA 90 bp GAATTGGAACTAGCCCTACTATTAGCAGACAGCATCAGGGCGGAGGCCCCCAGCGCTAAAATATGGAGTTaGATTGTTAGGCAAACACCA +
Preference number: 4 (lower is better)
Translates to: ELELALLLADSIRAEAPSAKIWS*IVRQTP
Trigger: TGGTGTTTGCCTAACAATTCAACTCCATATTTTAGC...GCTGGGGGCCTCCGCCCTGATGCTGTCTGCTAATAGTAGGGCTAGTTCCAATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR TCA 90 bp AGGCCCCGCCAGCCTGAAATGAGAGCTCTGTACTACTGTAACTACTGTTTACAAGGGAACATCCCTTTCTaGTGGCAAAGAGTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: RPRQPEMRALYYCNYCLQGNIPF*WQRVSG
Trigger: TCCAGAGACTCTTTGCCATCAGAAAGGGATGTTCCC...TTGTAAACAGTAGTTACAGTAGTACAGAGCTCTCATTTCAGGCTGGCGGGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR TCA 90 bp TGGGAGGGTGCTGAGATGGTAAGCCTCGTCCATGGAAAGTGTTCCTTCAATGTTTACAGATTAGGCAACTaGAGCTCGGGGAAGTTGAGT +
Preference number: 4 (lower is better)
Translates to: WEGAEMVSLVHGKCSFNVYRLGN*SSGKLS
Trigger: ACTCAACTTCCCCGAGCTTCAGTTGCCTAATCTGTA...AACATTGAAGGAACACTTTCCATGGACGAGGCTTACCATCTCAGCACCCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp TTCAGCCCATTCTTGAATGCCGTGTCCACCACATCACACTGCTTGCGCAGATCAATGGATTTCCTCATCTaGATACACAGCACTTCGTCG +
Preference number: 4 (lower is better)
Translates to: FSPFLNAVSTTSHCLRRSMDFLI*IHSTSS
Trigger: CGACGAAGTGCTGTGTATGCAGATGAGGAAATCCAT...TGATCTGCGCAAGCAGTGTGATGTGGTGGACACGGCATTCAAGAATGGGCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR GCA 90 bp TGGCCTCAAAGGGGGTTTCTCCATCCCAGATTGGGAACATCCCTTTCTGATGGCATTAGGCCCACACTCTaGATTATCATTGTGCCCTAT +
Preference number: 4 (lower is better)
Translates to: WPQRGFLHPRLGTSLSDGIRPTL*IIIVPY
Trigger: ATAGGGCACAATGATAATGCAGAGTGTGGGCCTAAT...GCCATCAGAAAGGGATGTTCCCAATCTGGGATGGAGAAACCCCCTTTGAGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp CTTCCCCATCCCGAAGTGGGATGGATTTCCTCATCTGCATACACAGCACTTCGTTCTCAAGATTGTACTTaGCAGAGCGGTTCATCCGAA +
Preference number: 4 (lower is better)
Translates to: LPHPEVGWISSSAYTALRSQDCT*QSGSSE
Trigger: TTCGGATGAACCGCTCTGCCAAGTACAATCTTGAGA...ACGAAGTGCTGTGTATGCAGATGAGGAAATCCATCCCACTTCGGGATGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CCA 90 bp TTTCTGATGGCAAAGAGTCTCTGGACCAAGGAGCACCTAGATTGCAAAGCTCCCTCTCCACATTGGTGCTaGAGAAGTCCAACCAGTCTT +
Preference number: 4 (lower is better)
Translates to: FLMAKSLWTKEHLDCKAPSPHWC*RSPTSL
Trigger: AAGACTGGTTGGACTTCTCCAGCACCAATGTGGAGA...GGGAGCTTTGCAATCTAGGTGCTCCTTGGTCCAGAGACTCTTTGCCATCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp CCTTACTTTACAGGTGGTCCTAAAGAAGGAGAGAAACTTTCCTGGCAGTGTTGCGCTTGCGCAGATCATTaGCTGTCTGGGACAGGATTC +
Preference number: 4 (lower is better)
Translates to: PYFTGGPKEGEKLSWQCCACADH*LSGTGF
Trigger: GAATCCTGTCCCAGACAGCCAATGATCTGCGCAAGC...GCAACACTGCCAGGAAAGTTTCTCTCCTTCTTTAGGACCACCTGTAAAGTAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp TGTGATGTTGAACATAGATGTGAATGGCCAAGTTTGATGGCCCCAAACCTGGCTGCTTGCGCAGATCATTaGCTGTCTGGGACAGGATTC +
Preference number: 4 (lower is better)
Translates to: CDVEHRCEWPSLMAPNLAACADH*LSGTGF
Trigger: GAATCCTGTCCCAGACAGCCAATGATCTGCGCAAGC...AGCCAGGTTTGGGGCCATCAAACTTGGCCATTCACATCTATGTTCAACATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS-3UTR CCA 90 bp GAATTAGGCCCACACTCTGCATTATCATTGTGCCCTATGACACCGTATGTGCAGTTGGCTGGCCCTTCTTaGTCAAGGATGGCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: ELGPHSALSLCPMTPYVQLAGPS*SRMAFS
Trigger: TGAAAAGGCCATCCTTGACCAAGAAGGGCCAGCCAA...CTGCACATACGGTGTCATAGGGCACAATGATAATGCAGAGTGTGGGCCTAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp GAATTAGGCCCACACTCTGCATTATCATTGTGCCCTATGACACCGTATGTGCAGTTCCCCATCCCGAAGTaGGATGGATTTCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: ELGPHSALSLCPMTPYVQFPIPK*DGFPHL
Trigger: CAGATGAGGAAATCCATCCCACTTCGGGATGGGGAA...CTGCACATACGGTGTCATAGGGCACAATGATAATGCAGAGTGTGGGCCTAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp GGATGGATTTCCTCATCTGCATACACAGCACTTCGTCGATATAAATGGTGTTCTCCCCCTGAGCAGGCTTaGAATGCCAGCCAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GWISSSAYTALRRYKWCSPPEQA*NASQEV
Trigger: AACCTCTTGGCTGGCATTCCAAGCCTGCTCAGGGGG...AGAACACCATTTATATCGACGAAGTGCTGTGTATGCAGATGAGGAAATCCATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CCA 90 bp TTTCTGATGGCAAAGAGTCTCTGGACCAAGGAGCACCTAGATTGCAAAGCTCCCTCCTTGATTGAGGCATaGGAAGGGCTGTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: FLMAKSLWTKEHLDCKAPSLIEA*EGLCIC
Trigger: GCAAATACACAGCCCTTCCCATGCCTCAATCAAGGA...GGGAGCTTTGCAATCTAGGTGCTCCTTGGTCCAGAGACTCTTTGCCATCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR CAA 72 bp AGGGCCACAAACTTGTCCTTCAAATCCTTCTCAAGATaGTACTTGGCAGAGCGGTTCATCCGAATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: RATNLSFKSFSR*YLAERFIRICS
Trigger: CGAGCAGATTCGGATGAACCGCTCTGCCAAGTACAATCTTGAGAAGGATTTGAAGGACAAGTTTGTGGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR TCA 90 bp GATCCACCAGCTGATCTGAATCACATCTCCCTGCAGAGCCTGGGATCTGAATCCCGTTCTCAGAATATCTaGTGTTTGGTGAGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: DPPADLNHISLQSLGSESRSQNI*CLVSCC
Trigger: ACAACAACTCACCAAACATCAGATATTCTGAGAACG...GGATTCAGATCCCAGGCTCTGCAGGGAGATGTGATTCAGATCAGCTGGTGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR TCA 90 bp GTAAGCCTCGTCCATGGAAAGTGTTCCTTCAATGTTAGCGGAATAAGGAACAAAATGACCTTGGCCAGATaGTCAGCCAGCTTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: VSLVHGKCSFNVSGIRNKMTLAR*SASLSL
Trigger: CAGGGACAAGCTGGCTGATCATCTGGCCAAGGTCAT...TTTGTTCCTTATTCCGCTAACATTGAAGGAACACTTTCCATGGACGAGGCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR TCA 90 bp GAATTAGGCCCACACTCTGCATTATCATTGTGCCCTATGACACCGTATGTGCAGAAGCAATCTCTTCCATaGCCTTGGCCAGATGATCAG +
Preference number: 4 (lower is better)
Translates to: ELGPHSALSLCPMTPYVQKQSLP*PWPDDQ
Trigger: CTGATCATCTGGCCAAGGTCATGGAAGAGATTGCTT...CTGCACATACGGTGTCATAGGGCACAATGATAATGCAGAGTGTGGGCCTAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR TCA 90 bp TTTCCTTACTTTACAGGTGGTCCTAAAGAAGGAGAGAAACTTTCCTGGCAGTGTCTGAGGTCTGCCCAGTaGGCTGGGAAGGCTTATTTG +
Preference number: 4 (lower is better)
Translates to: FPYFTGGPKEGEKLSWQCLRSAQ*AGKAYL
Trigger: CAAATAAGCCTTCCCAGCTCACTGGGCAGACCTCAG...ACACTGCCAGGAAAGTTTCTCTCCTTCTTTAGGACCACCTGTAAAGTAAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR TCA 90 bp TTTCCTGTGTCTCCTTTATTTTTCCACAAATATGCTGAGACCGGGTCTGTGATGCTTCTCTTGGCCAGATaGTCAGCCAGCTTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: FPVSPLFFHKYAETGSVMLLLAR*SASLSL
Trigger: CAGGGACAAGCTGGCTGATCATCTGGCCAAGAGAAG...CATCACAGACCCGGTCTCAGCATATTTGTGGAAAAATAAAGGAGACACAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS-3UTR TCA 90 bp CACAAATATGCTGAGACCGGGTCTGTGATGTTGAACATAGATGTGAATGGCCAAGTGAATGGCCAAGTTTaGTGGCCCCAAACCTGGCTT +
Preference number: 4 (lower is better)
Translates to: HKYAETGSVMLNIDVNGQVNGQV*WPQTWL
Trigger: AAGCCAGGTTTGGGGCCATCAAACTTGGCCATTCAC...TTGGCCATTCACATCTATGTTCAACATCACAGACCCGGTCTCAGCATATTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS-3UTR TCA 90 bp GACCGGGTCTGTGATGTTGAACATAGATGTGAATGGCCAAGTTTGATGGCCCCATTTCCACAAATATGCTaGGACCGGGTCTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: DRVCDVEHRCEWPSLMAPFPQIC*DRVCDV
Trigger: AACATCACAGACCCGGTCTCAGCATATTTGTGGAAA...TGGGGCCATCAAACTTGGCCATTCACATCTATGTTCAACATCACAGACCCGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS-3UTR GCA 90 bp GGTCCTATACTCAGATGGCAGACTCCGGAACCTACAGTCTTAACCATTGACTTGTTCTTGTTAGCAATGTaGCACTCTGAGGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GPILRWQTPEPTVLTIDLFLLAM*HSEGRN
Trigger: GTTCCTGCCCTCAGAGTGGCACATTGCTAACAAGAA...CAAGTCAATGGTTAAGACTGTAGGTTCCGGAGTCTGCCATCTGAGTATAGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp GGTCCTATACTCAGATGGCAGACTCCGGAACCTACAGTCTTAACCATTGACTTGCATGTCTCAGTGATGTaGAAGGGCTCTTTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: GPILRWQTPEPTVLTIDLHVSVM*KGSFKV
Trigger: GACCTTGAAAGAGCCCTTGCACATCACTGAGACATG...CAAGTCAATGGTTAAGACTGTAGGTTCCGGAGTCTGCCATCTGAGTATAGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp AGGCCCCGCCAGCCTGAAATGAGAGCTCTGTACTACTGTAACTACTGTTTACAAACAGAATTAAGCCAGTaGTTTTGGCCTCAAAGGGGG +
Preference number: 4 (lower is better)
Translates to: RPRQPEMRALYYCNYCLQTELSQ*FWPQRG
Trigger: CCCCCTTTGAGGCCAAAAGCACTGGCTTAATTCTGT...TTGTAAACAGTAGTTACAGTAGTACAGAGCTCTCATTTCAGGCTGGCGGGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp GTAAGCCTCGTCCATGGAAAGTGTTCCTTCAATGTTAGCGGAATAAGGAACAAAAGTGTCTTCACACCCTaGCAGCCACATCCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: VSLVHGKCSFNVSGIRNKSVFTP*QPHPLG
Trigger: TCCCAGAGGATGTGGCTGGCAGGGTGTGAAGACACT...TTTGTTCCTTATTCCGCTAACATTGAAGGAACACTTTCCATGGACGAGGCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp CGGAAGGCAGCCTCCCACAAGTTGAACTCTTTTTGGAAAAGAAACAGTAAGTATTCATCCACAAGCCTCTaGCTTTCTGCGACCAGGCGT +
Preference number: 4 (lower is better)
Translates to: RKAASHKLNSFWKRNSKYSSTSL*LSATRR
Trigger: ACGCCTGGTCGCAGAAAGCCAGAGGCTTGTGGATGA...ATACTTACTGTTTCTTTTCCAAAAAGAGTTCAACTTGTGGGAGGCTGCCTTCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp CCATTCTTGAATGCCGTGTCCACCACATCACACTGCTTGCGCAGATCATTGGCTAGCAGATATCATCTATaGTCAGGGCCACAAACTTGT +
Preference number: 4 (lower is better)
Translates to: PFLNAVSTTSHCLRRSLASRYHL*SGPQTC
Trigger: ACAAGTTTGTGGCCCTGACCATAGATGATATCTGCT...AGCCAATGATCTGCGCAAGCAGTGTGATGTGGTGGACACGGCATTCAAGAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CCA 90 bp TGTGATGTTGAACATAGATGTGAATGGCCAAGTTTGATGGCCCCAAACCTGGCTAGATCATTGGCTGTCTaGGACAGGATTCGATCCACC +
Preference number: 4 (lower is better)
Translates to: CDVEHRCEWPSLMAPNLARSLAV*DRIRST
Trigger: GGTGGATCGAATCCTGTCCCAGACAGCCAATGATCT...AGCCAGGTTTGGGGCCATCAAACTTGGCCATTCACATCTATGTTCAACATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS-3UTR CCA 90 bp CTAGACAGCCAGATTCAGGGAACAGCAAGGACAGGAAGAGTTCCAGACGATATACATCCCGAAGTGGGATaGATTTCCTCATCTGCATAC +
Preference number: 4 (lower is better)
Translates to: LDSQIQGTARTGRVPDDIHPEVG*ISSSAY
Trigger: GTATGCAGATGAGGAAATCCATCCCACTTCGGGATG...TATATCGTCTGGAACTCTTCCTGTCCTTGCTGTTCCCTGAATCTGGCTGTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp TTCACAAGGAAGGATTTTGCCCAGTGTCTTCACACCCTGCCAGCCACATCCTCTTGGGACTGCTCACAATaGCTCACATTCATTAAACAC +
Preference number: 4 (lower is better)
Translates to: FTRKDFAQCLHTLPATSSWDCSQ*LTFIKH
Trigger: GTGTTTAATGAATGTGAGCCATTGTGAGCAGTCCCA...AGAGGATGTGGCTGGCAGGGTGTGAAGACACTGGGCAAAATCCTTCCTTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp TTTCTGATGGCAAAGAGTCTCTGGACCAAGGAGCACCTAGATTGCAAAGCTCCCGTGCAGAAATTATGTTaGTATAGGGTGGGACTGCTC +
Preference number: 4 (lower is better)
Translates to: FLMAKSLWTKEHLDCKAPVQKLC*YRVGLL
Trigger: GAGCAGTCCCACCCTATACCAACATAATTTCTGCAC...GGGAGCTTTGCAATCTAGGTGCTCCTTGGTCCAGAGACTCTTTGCCATCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp TTTCTGATGGCAAAGAGTCTCTGGACCAAGGAGCACCTAGATTGCAAAGCTCCCCGTTCAGCACTGGGGTaGCATAGATCAGAATTAACA +
Preference number: 4 (lower is better)
Translates to: FLMAKSLWTKEHLDCKAPRSALG*HRSELT
Trigger: TGTTAATTCTGATCTATGCCACCCCAGTGCTGAACG...GGGAGCTTTGCAATCTAGGTGCTCCTTGGTCCAGAGACTCTTTGCCATCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp GACCGGGTCTGTGATGTTGAACATAGATGTGAATGGCCAAGTTTGATGGCCCCAACTTGTCTTGTGCCTTaGGGCAAGAATTTAACCTCC +
Preference number: 4 (lower is better)
Translates to: DRVCDVEHRCEWPSLMAPTCLVP*GKNLTS
Trigger: GGAGGTTAAATTCTTGCCCCAAGGCACAAGACAAGT...TGGGGCCATCAAACTTGGCCATTCACATCTATGTTCAACATCACAGACCCGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTAAAATATGGAGTTGAATTGTTAGGCAAACACCACACCAGCATACCAGGCATGTCTCAGTaGTGTGCAAGGGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: WPVLKYGVELLGKHHTSIPGMSQ*CARALS
Trigger: TGAAAGAGCCCTTGCACATCACTGAGACATGCCTGG...TATGCTGGTGTGGTGTTTGCCTAACAATTCAACTCCATATTTTAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR TCA 90 bp TGGCCTGTGCTAAAATATGGAGTTGAATTGTTAGGCAAACACCACACCAGCATACCTTTCAGCTCTGCCTaGGCTTGGGCTAAAGTTTCC +
Preference number: 4 (lower is better)
Translates to: WPVLKYGVELLGKHHTSIPFSSA*AWAKVS
Trigger: GGAAACTTTAGCCCAAGCTCAGGCAGAGCTGAAAGG...TATGCTGGTGTGGTGTTTGCCTAACAATTCAACTCCATATTTTAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338694.7
ENST00000575592.1
CDS-3UTR TCA 90 bp AGAGCTCTGTACTACTGTAACTACTGTTTACAATGTGGTTTAATGAGAATTGGAAGGGGCCTCCCTCCTTaGTTGAGGCATGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: RALYYCNYCLQCGLMRIGRGLPP*LRHGKG
Trigger: GCCCTTCCCATGCCTCAATCAAGGAGGGAGGCCCCT...TCCAATTCTCATTAAACCACATTGTAAACAGTAGTTACAGTAGTACAGAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp TGGCCTGTGCTAAAATATGGAGTTGAATTGTTAGGCAAACACCACACCAGCATAGCGCTTCTCCCTGTATaGCAGGCATGTCTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: WPVLKYGVELLGKHHTSIALLPV*QACLSD
Trigger: ATCACTGAGACATGCCTGGCATACAGGGAGAAGCGC...TATGCTGGTGTGGTGTTTGCCTAACAATTCAACTCCATATTTTAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp CGGAAGGCAGCCTCCCACAAGTTGAACTCTTTTTGGAAAAGAAACAGTAAGTATTGCTCCACTGTGTCGTaGACCAGGTCAATGCCAATG +
Preference number: 4 (lower is better)
Translates to: RKAASHKLNSFWKRNSKYCSTVS*TRSMPM
Trigger: CATTGGCATTGACCTGGTGCACGACACAGTGGAGCA...ATACTTACTGTTTCTTTTCCAAAAAGAGTTCAACTTGTGGGAGGCTGCCTTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp CCTCATCTGCATACACAGCACTTCGTCGATATAAATGGTGTTCTCTTTGACCTGTCCTTTATCAGCTCATaGTCCACTGTGTCGTGCACC +
Preference number: 4 (lower is better)
Translates to: PHLHTQHFVDINGVLFDLSFISS*STVSCT
Trigger: GGTGCACGACACAGTGGAGCATGAGCTGATAAAGGA...CAGGTCAAAGAGAACACCATTTATATCGACGAAGTGCTGTGTATGCAGATGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR GCA 90 bp TGGCCTGTGCTAAAATATGGAGTTGAATTGTTAGGCAAACACCACACCAGCATAAGGGAGTTGTTCCGCTaGTTGTCAGCCTTCTCCACA +
Preference number: 4 (lower is better)
Translates to: WPVLKYGVELLGKHHTSIRELFR*LSAFST
Trigger: TGTGGAGAAGGCTGACAAGCAGCGGAACAACTCCCT...TATGCTGGTGTGGTGTTTGCCTAACAATTCAACTCCATATTTTAGCACAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338694.7
ENST00000575592.1
CDS-3UTR GCA 90 bp GATGTTGAACATAGATGTGAATGGCCAAGTTTGATGGCCCCAAACCTGGCTTTTCCACATCACACTGCTTaGGCAGATCATTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: DVEHRCEWPSLMAPNLAFPHHTA*ADHWLS
Trigger: AGACAGCCAATGATCTGCGCAAGCAGTGTGATGTGG...AAAAGCCAGGTTTGGGGCCATCAAACTTGGCCATTCACATCTATGTTCAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS-3UTR GCA 90 bp TTTGGCTCAATCCTCACGGCGTTCTCAGAATATCTGATGTTTGGTGAGTTGTTGCCACATCACACTGCTTaGGCAGATCATTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: FGSILTAFSEYLMFGELLPHHTA*ADHWLS
Trigger: AGACAGCCAATGATCTGCGCAAGCAGTGTGATGTGG...CAACAACTCACCAAACATCAGATATTCTGAGAACGCCGTGAGGATTGAGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR GCA 90 bp CACAAATATGCTGAGACCGGGTCTGTGATGTTGAACATAGATGTGAATGGCCAATCCACCACATCACACTaGTTGCGCAGATCATTGGCT +
Preference number: 4 (lower is better)
Translates to: HKYAETGSVMLNIDVNGQSTTSH*LRRSLA
Trigger: AGCCAATGATCTGCGCAAGCAGTGTGATGTGGTGGA...TTGGCCATTCACATCTATGTTCAACATCACAGACCCGGTCTCAGCATATTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS-3UTR CCA 90 bp GAGTTGTTGTTGAGCGAGAAGCAGATATCATCTATGGTCAGGGCCACAAACTTGAGAGCCATAATGCCCTaGATGATCTCAGCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: ELLLSEKQISSMVRATNLRAIMP*MISASF
Trigger: AAAGGAGGCTGAGATCATCCAGGGCATTATGGCTCT...CAAGTTTGTGGCCCTGACCATAGATGATATCTGCTTCTCGCTCAACAACAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CCA 90 bp TTTGGCTCAATCCTCACGGCGTTCTCAGAATATCTGATGTTTGGTGAGTTGTTGAGATCATTGGCTGTCTaGGACAGGATTCGATCCACC +
Preference number: 4 (lower is better)
Translates to: FGSILTAFSEYLMFGELLRSLAV*DRIRST
Trigger: GGTGGATCGAATCCTGTCCCAGACAGCCAATGATCT...CAACAACTCACCAAACATCAGATATTCTGAGAACGCCGTGAGGATTGAGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CCA 90 bp GATGTTGAACATAGATGTGAATGGCCAAGTTTGATGGCCCCAAACCTGGCTTTTCAGCCAGCTTGTCCCTaGCATCCTTTGTATCCTTCA +
Preference number: 4 (lower is better)
Translates to: DVEHRCEWPSLMAPNLAFQPACP*HPLYPS
Trigger: TGAAGGATACAAAGGATGCCAGGGACAAGCTGGCTG...AAAAGCCAGGTTTGGGGCCATCAAACTTGGCCATTCACATCTATGTTCAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS-3UTR CCA 90 bp CGGAAGGCAGCCTCCCACAAGTTGAACTCTTTTTGGAAAAGAAACAGTAAGTATGTGTTCTCTTTGACCTaGATCTCCTCCTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: RKAASHKLNSFWKRNSKYVFSLT*ISSCRA
Trigger: TGCCCTGCAGGAGGAGATCCAGGTCAAAGAGAACAC...ATACTTACTGTTTCTTTTCCAAAAAGAGTTCAACTTGTGGGAGGCTGCCTTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp TGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGACAGCCAGCCCAGACCCCATaGTCTTCCCCATCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: CLQCGLMRIGTSPTISRQPAQTP*SSPSRS
Trigger: ACTTCGGGATGGGGAAGACCATGGGGTCTGGGCTGG...CTGTCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR CCA 90 bp AGGCCCCGCCAGCCTGAAATGAGAGCTCTGTACTACTGTAACTACTGTTTACAAGGTAAGCCTCGTCCATaGAAAGTGTTCCTTCAATGT +
Preference number: 4 (lower is better)
Translates to: RPRQPEMRALYYCNYCLQGKPRP*KVFLQC
Trigger: ACATTGAAGGAACACTTTCCATGGACGAGGCTTACC...TTGTAAACAGTAGTTACAGTAGTACAGAGCTCTCATTTCAGGCTGGCGGGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR CAA 72 bp ACAAACTTGTCCTTCAAATCCTTCTCAAGATTGTACTaGGCAGAGCGGTTCATCCGAATCTGCTCGGAAGCC +
Preference number: 4 (lower is better)
Translates to: TNLSFKSFSRLY*AERFIRICSEA
Trigger: GGCTTCCGAGCAGATTCGGATGAACCGCTCTGCCAAGTACAATCTTGAGAAGGATTTGAAGGACAAGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR TCA 90 bp CTTCCCCATCCCGAAGTGGGATGGATTTCCTCATCTGCATACACAGCACTTCGTAATAGTTTAGCCATTTaGGGTTTCCAAATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LPHPEVGWISSSAYTALRNSLAI*GFQIPQ
Trigger: CTGAGGAATTTGGAAACCTCAAATGGCTAAACTATT...ACGAAGTGCTGTGTATGCAGATGAGGAAATCCATCCCACTTCGGGATGGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR TCA 90 bp ACCAGTCTTCCAGACTCACGGAGTTTGGCTCAATCCTCACGGCGTTCTCAGAATTTGTTCACATCGCTTTaGGATTTTCTTGTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: TSLPDSRSLAQSSRRSQNLFTSL*DFLVVF
Trigger: AAAGACCACAAGAAAATCTCAAAGCGATGTGAACAA...ATTCTGAGAACGCCGTGAGGATTGAGCCAAACTCCGTGAGTCTGGAAGACTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR TCA 90 bp CTAGACAGCCAGATTCAGGGAACAGCAAGGACAGGAAGAGTTCCAGACGATATATTGGTGAGTTGTTGTTaGGCGAGAAGCAGATATCAT +
Preference number: 4 (lower is better)
Translates to: LDSQIQGTARTGRVPDDILVSCC*ARSRYH
Trigger: ATGATATCTGCTTCTCGCTCAACAACAACTCACCAA...TATATCGTCTGGAACTCTTCCTGTCCTTGCTGTTCCCTGAATCTGGCTGTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR TCA 90 bp CAGTCTTCCAGACTCACGGAGTTTGGCTCAATCCTCACGGCGTTCTCAGAATATCGTTCTCAGAATATCTaGTGTTTGGTGAGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: QSSRLTEFGSILTAFSEYRSQNI*CLVSCC
Trigger: ACAACAACTCACCAAACATCAGATATTCTGAGAACG...ATATTCTGAGAACGCCGTGAGGATTGAGCCAAACTCCGTGAGTCTGGAAGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR TCA 90 bp CCTCATCTGCATACACAGCACTTCGTCGATATAAATGGTGTTCTCTTTGACCTGTTGCGACATTGTGGGTaGTCTCTTGAACCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PHLHTQHFVDINGVLFDLLRHCG*SLEPPS
Trigger: TGAAGGAGGTTCAAGAGATCACCCACAATGTCGCAA...CAGGTCAAAGAGAACACCATTTATATCGACGAAGTGCTGTGTATGCAGATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR TCA 90 bp TCCTTTCCTTACTTTACAGGTGGTCCTAAAGAAGGAGAGAAACTTTCCTGGCAGAAATGGTGTTCTCTTTaGCCTGGATCTCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SFPYFTGGPKEGEKLSWQKWCSL*PGSPPA
Trigger: TGCAGGAGGAGATCCAGGTCAAAGAGAACACCATTT...CTGCCAGGAAAGTTTCTCTCCTTCTTTAGGACCACCTGTAAAGTAAGGAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR TCA 90 bp AGGCCCCGCCAGCCTGAAATGAGAGCTCTGTACTACTGTAACTACTGTTTACAAGGAATAAGGAACAAATaGGCAGTTTCCCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: RPRQPEMRALYYCNYCLQGIRNK*AVSHSK
Trigger: TTTGCTGTGGGAAACTGCTCATTTGTTCCTTATTCC...TTGTAAACAGTAGTTACAGTAGTACAGAGCTCTCATTTCAGGCTGGCGGGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp GCCAAGAGAAAGGTTAGCATCCCATCTCATGAGCAAGAGGGGCATGGTCTACACGTTACATTCACAAGCTaGTCAAGTTTGTCATCTAAC +
Preference number: 4 (lower is better)
Translates to: AKRKVSIPSHEQEGHGLHVTFTS*SSLSSN
Trigger: GTTAGATGACAAACTTGAGCAGCTTGTGAATGTAAC...GTGTAGACCATGCCCCTCTTGCTCATGAGATGGGATGCTAACCTTTCTCTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp AGGCCCCGCCAGCCTGAAATGAGAGCTCTGTACTACTGTAACTACTGTTTACAAAGCAGATATCATCTATaGTCAGGGCCACAAACTTGT +
Preference number: 4 (lower is better)
Translates to: RPRQPEMRALYYCNYCLQSRYHL*SGPQTC
Trigger: ACAAGTTTGTGGCCCTGACCATAGATGATATCTGCT...TTGTAAACAGTAGTTACAGTAGTACAGAGCTCTCATTTCAGGCTGGCGGGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338694.7
ENST00000575592.1
CDS-3UTR CCA 90 bp CAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGACAGCATCAGCAGCCTTCTCCACATTaGTGCTGGAGAAGTCCAACC +
Preference number: 4 (lower is better)
Translates to: QCGLMRIGTSPTISRQHQQPSPH*CWRSPT
Trigger: GGTTGGACTTCTCCAGCACCAATGTGGAGAAGGCTG...CTGATGCTGTCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CCA 90 bp CAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGACAGCATCAGGCTTGCGCAGATCATTaGCTGTCTGGGACAGGATTC +
Preference number: 4 (lower is better)
Translates to: QCGLMRIGTSPTISRQHQACADH*LSGTGF
Trigger: GAATCCTGTCCCAGACAGCCAATGATCTGCGCAAGC...CTGATGCTGTCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
3UTR CAA 72 bp CCTGCTGCAGCTCAGCGGAAGGCAGCCTCCCACAAGTaGAACTCTTTTTGGAAAAGAAACAGTAAGTATATA +
Preference number: 4 (lower is better)
Translates to: PAAAQRKAASHK*NSFWKRNSKYI
Trigger: TATATACTTACTGTTTCTTTTCCAAAAAGAGTTCAACTTGTGGGAGGCTGCCTTCCGCTGAGCTGCAGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR CAA 72 bp GCGTTCTCAGAATATCTGATGTTTGGTGAGTTGTTGTaGAGCGAGAAGCAGATATCATCTATGGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: AFSEYLMFGELL*SEKQISSMVRA
Trigger: GGCCCTGACCATAGATGATATCTGCTTCTCGCTCAACAACAACTCACCAAACATCAGATATTCTGAGAACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTAAAATATGGAGTTGAATTGTTAGGCAAACACCACACCAGCATACATGGTCTACACAGGTaGTCCAGCCCAACTACTTTA +
Preference number: 4 (lower is better)
Translates to: WPVLKYGVELLGKHHTSIHGLHR*SSPTTL
Trigger: TAAAGTAGTTGGGCTGGATCACCTGTGTAGACCATG...TATGCTGGTGTGGTGTTTGCCTAACAATTCAACTCCATATTTTAGCACAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338694.7
ENST00000575592.1
CDS-3UTR TCA 90 bp AGAGCTCTGTACTACTGTAACTACTGTTTACAATGTGGTTTAATGAGAATTGGAACCGTCAGCTGTCCATaGGCACCGGGGAACCAAATG +
Preference number: 4 (lower is better)
Translates to: RALYYCNYCLQCGLMRIGTVSCP*APGNQM
Trigger: CATTTGGTTCCCCGGTGCTCATGGACAGCTGACGGT...TCCAATTCTCATTAAACCACATTGTAAACAGTAGTTACAGTAGTACAGAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR TCA 90 bp TCCTTTCCTTACTTTACAGGTGGTCCTAAAGAAGGAGAGAAACTTTCCTGGCAGTTCCAGACACTGTGTTaGGAGTCTTCCACACGTTAT +
Preference number: 4 (lower is better)
Translates to: SFPYFTGGPKEGEKLSWQFQTLC*ESSTRY
Trigger: ATAACGTGTGGAAGACTCTCAACACAGTGTCTGGAA...CTGCCAGGAAAGTTTCTCTCCTTCTTTAGGACCACCTGTAAAGTAAGGAAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp AAAGAAATTTTGAGAGCCAAGAGAAAGGTTAGCATCCCATCTCATGAGCAAGAGTCCACCACATCACACTaGTTGCGCAGATCATTGGCT +
Preference number: 4 (lower is better)
Translates to: KEILRAKRKVSIPSHEQESTTSH*LRRSLA
Trigger: AGCCAATGATCTGCGCAAGCAGTGTGATGTGGTGGA...CTCTTGCTCATGAGATGGGATGCTAACCTTTCTCTTGGCTCTCAAAATTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp TACTGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGAGCAAGCTGTCTGCGATaGAGCCCTTTCAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: YCLQCGLMRIGTSPTISRASCLR*SPFSSA
Trigger: GGCAGAGCTGAAAGGGCTGCATCGCAGACAGCTTGC...TCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR GCA 90 bp TACTGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGAGCAGGGCAAGCTGTCTaGGATGCAGCCCTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: YCLQCGLMRIGTSPTISRAGQAV*DAALSA
Trigger: AGCTGAAAGGGCTGCATCGCAGACAGCTTGCCCTGC...TCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR GCA 90 bp TACTGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGAACCTGGATCTCCTCCTaGAGGGCAAGCTGTCTGCGA +
Preference number: 4 (lower is better)
Translates to: YCLQCGLMRIGTSPTISRTWISS*RASCLR
Trigger: TCGCAGACAGCTTGCCCTGCAGGAGGAGATCCAGGT...TCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR CCA 90 bp GGATGGATTTCCTCATCTGCATACACAGCACTTCGTCGATATAAATGGTGTTCTTCTCCACATTGGTGCTaGAGAAGTCCAACCAGTCTT +
Preference number: 4 (lower is better)
Translates to: GWISSSAYTALRRYKWCSSPHWC*RSPTSL
Trigger: AAGACTGGTTGGACTTCTCCAGCACCAATGTGGAGA...AGAACACCATTTATATCGACGAAGTGCTGTGTATGCAGATGAGGAAATCCATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CCA 90 bp GTAAGCCTCGTCCATGGAAAGTGTTCCTTCAATGTTAGCGGAATAAGGAACAAAATGGCAAAGAGTCTCTaGACCAAGGAGCACCTAGAT +
Preference number: 4 (lower is better)
Translates to: VSLVHGKCSFNVSGIRNKMAKSL*TKEHLD
Trigger: ATCTAGGTGCTCCTTGGTCCAGAGACTCTTTGCCAT...TTTGTTCCTTATTCCGCTAACATTGAAGGAACACTTTCCATGGACGAGGCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp TGGCCTGTGCTAAAATATGGAGTTGAATTGTTAGGCAAACACCACACCAGCATATTAAGCCAGTGCTTTTaGCCTCAAAGGGGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: WPVLKYGVELLGKHHTSILSQCF*PQRGFL
Trigger: GAGAAACCCCCTTTGAGGCCAAAAGCACTGGCTTAA...TATGCTGGTGTGGTGTTTGCCTAACAATTCAACTCCATATTTTAGCACAGGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338694.7
3UTR CAA 72 bp ACGGCGTTCTCAGAATATCTGATGTTTGGTGAGTTGTaGTTGAGCGAGAAGCAGATATCATCTATGGTCAGG +
Preference number: 4 (lower is better)
Translates to: TAFSEYLMFGEL*LSEKQISSMVR
Trigger: CCTGACCATAGATGATATCTGCTTCTCGCTCAACAACAACTCACCAAACATCAGATATTCTGAGAACGCCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR TCA 90 bp AGGCCCCGCCAGCCTGAAATGAGAGCTCTGTACTACTGTAACTACTGTTTACAAAATAGTTTAGCCATTTaGGGTTTCCAAATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RPRQPEMRALYYCNYCLQNSLAI*GFQIPQ
Trigger: CTGAGGAATTTGGAAACCTCAAATGGCTAAACTATT...TTGTAAACAGTAGTTACAGTAGTACAGAGCTCTCATTTCAGGCTGGCGGGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338694.7
ENST00000575592.1
CDS-3UTR TCA 90 bp AGAGCTCTGTACTACTGTAACTACTGTTTACAATGTGGTTTAATGAGAATTGGATCTGATCGGGACCTTTaGGCGTCTGCTCTGTGGTAC +
Preference number: 4 (lower is better)
Translates to: RALYYCNYCLQCGLMRIGSDRDL*ASALWY
Trigger: GTACCACAGAGCAGACGCTCAAAGGTCCCGATCAGA...TCCAATTCTCATTAAACCACATTGTAAACAGTAGTTACAGTAGTACAGAGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338694.7
ENST00000575592.1
CDS-3UTR TCA 90 bp TGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGACAGCCTTCAGCCCATTCTTaGATGCCGTGTCCACCACAT +
Preference number: 4 (lower is better)
Translates to: CLQCGLMRIGTSPTISRQPSAHS*MPCPPH
Trigger: ATGTGGTGGACACGGCATTCAAGAATGGGCTGAAGG...CTGTCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR TCA 90 bp AAAGAAATTTTGAGAGCCAAGAGAAAGGTTAGCATCCCATCTCATGAGCAAGAGTTGCGACATTGTGGGTaGTCTCTTGAACCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: KEILRAKRKVSIPSHEQELRHCG*SLEPPS
Trigger: TGAAGGAGGTTCAAGAGATCACCCACAATGTCGCAA...CTCTTGCTCATGAGATGGGATGCTAACCTTTCTCTTGGCTCTCAAAATTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR TCA 90 bp TGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGACAGCCCGCCAGCCTGAAATaGGAGCTCTGTACTACTGTA +
Preference number: 4 (lower is better)
Translates to: CLQCGLMRIGTSPTISRQPASLK*ELCTTV
Trigger: TACAGTAGTACAGAGCTCTCATTTCAGGCTGGCGGG...CTGTCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR GCA 90 bp GTAAGCCTCGTCCATGGAAAGTGTTCCTTCAATGTTAGCGGAATAAGGAACAAAATGGATTTCCTCATCTaGATACACAGCACTTCGTCG +
Preference number: 4 (lower is better)
Translates to: VSLVHGKCSFNVSGIRNKMDFLI*IHSTSS
Trigger: CGACGAAGTGCTGTGTATGCAGATGAGGAAATCCAT...TTTGTTCCTTATTCCGCTAACATTGAAGGAACACTTTCCATGGACGAGGCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp TTTCTGATGGCAAAGAGTCTCTGGACCAAGGAGCACCTAGATTGCAAAGCTCCCCTGAAATTGAGTTTATaGCATGAGTACAATTGTGCA +
Preference number: 4 (lower is better)
Translates to: FLMAKSLWTKEHLDCKAPLKLSL*HEYNCA
Trigger: TGCACAATTGTACTCATGGCATAAACTCAATTTCAG...GGGAGCTTTGCAATCTAGGTGCTCCTTGGTCCAGAGACTCTTTGCCATCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CCA 90 bp AAATATGCTGAGACCGGGTCTGTGATGTTGAACATAGATGTGAATGGCCAAGTTGAACATAGATGTGAATaGCCAAGTTTGATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: KYAETGSVMLNIDVNGQVEHRCE*PSLMAP
Trigger: TGGGGCCATCAAACTTGGCCATTCACATCTATGTTC...AACTTGGCCATTCACATCTATGTTCAACATCACAGACCCGGTCTCAGCATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571744.1
3UTR CAA 72 bp GAGAAGCAGATATCATCTATGGTCAGGGCCACAAACTaGTCCTTCAAATCCTTCTCAAGATTGTACTTGGCA +
Preference number: 4 (lower is better)
Translates to: EKQISSMVRATN*SFKSFSRLYLA
Trigger: TGCCAAGTACAATCTTGAGAAGGATTTGAAGGACAAGTTTGTGGCCCTGACCATAGATGATATCTGCTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR TCA 90 bp TGGCCTGTGCTAAAATATGGAGTTGAATTGTTAGGCAAACACCACACCAGCATATTGGTGAGTTGTTGTTaGGCGAGAAGCAGATATCAT +
Preference number: 4 (lower is better)
Translates to: WPVLKYGVELLGKHHTSILVSCC*ARSRYH
Trigger: ATGATATCTGCTTCTCGCTCAACAACAACTCACCAA...TATGCTGGTGTGGTGTTTGCCTAACAATTCAACTCCATATTTTAGCACAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338694.7
ENST00000575592.1
CDS-3UTR TCA 90 bp TACTGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGACCTTTCAGCTCTGCCTaGGCTTGGGCTAAAGTTTCC +
Preference number: 4 (lower is better)
Translates to: YCLQCGLMRIGTSPTISRPFSSA*AWAKVS
Trigger: GGAAACTTTAGCCCAAGCTCAGGCAGAGCTGAAAGG...TCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR GCA 90 bp AGAGCTCTGTACTACTGTAACTACTGTTTACAATGTGGTTTAATGAGAATTGGACCAGGTCAATGCCAATaGGCTTCTCCCTGTATGCCA +
Preference number: 4 (lower is better)
Translates to: RALYYCNYCLQCGLMRIGPGQCQ*ASPCMP
Trigger: TGGCATACAGGGAGAAGCGCATTGGCATTGACCTGG...TCCAATTCTCATTAAACCACATTGTAAACAGTAGTTACAGTAGTACAGAGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR GCA 90 bp TACTGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGATGCTCCACTGTGTCGTaGACCAGGTCAATGCCAATG +
Preference number: 4 (lower is better)
Translates to: YCLQCGLMRIGTSPTISRCSTVS*TRSMPM
Trigger: CATTGGCATTGACCTGGTGCACGACACAGTGGAGCA...TCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR GCA 90 bp TACTGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGAAGGGAGTTGTTCCGCTaGTTGTCAGCCTTCTCCACA +
Preference number: 4 (lower is better)
Translates to: YCLQCGLMRIGTSPTISRRELFR*LSAFST
Trigger: TGTGGAGAAGGCTGACAAGCAGCGGAACAACTCCCT...TCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR CCA 90 bp TACTGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGACAGCCTTCTCCACATTaGTGCTGGAGAAGTCCAACC +
Preference number: 4 (lower is better)
Translates to: YCLQCGLMRIGTSPTISRQPSPH*CWRSPT
Trigger: GGTTGGACTTCTCCAGCACCAATGTGGAGAAGGCTG...TCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR CCA 90 bp TACTGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGAGCTTGCGCAGATCATTaGCTGTCTGGGACAGGATTC +
Preference number: 4 (lower is better)
Translates to: YCLQCGLMRIGTSPTISRACADH*LSGTGF
Trigger: GAATCCTGTCCCAGACAGCCAATGATCTGCGCAAGC...TCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR CCA 90 bp TGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGACAGCAGCCAGCTTGTCCCTaGCATCCTTTGTATCCTTCA +
Preference number: 4 (lower is better)
Translates to: CLQCGLMRIGTSPTISRQQPACP*HPLYPS
Trigger: TGAAGGATACAAAGGATGCCAGGGACAAGCTGGCTG...CTGTCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR CCA 90 bp TGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGACAGTTGGCTGGCCCTTCTTaGTCAAGGATGGCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: CLQCGLMRIGTSPTISRQLAGPS*SRMAFS
Trigger: TGAAAAGGCCATCCTTGACCAAGAAGGGCCAGCCAA...CTGTCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CCA 90 bp TACTGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGAATGAGCCACCTTGGCTaGCCCTTCTTGGTCAAGGAT +
Preference number: 4 (lower is better)
Translates to: YCLQCGLMRIGTSPTISRMSHLG*PFLVKD
Trigger: ATCCTTGACCAAGAAGGGCCAGCCAAGGTGGCTCAT...TCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CCA 90 bp TACTGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGAGTGTTCTCTTTGACCTaGATCTCCTCCTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: YCLQCGLMRIGTSPTISRVFSLT*ISSCRA
Trigger: TGCCCTGCAGGAGGAGATCCAGGTCAAAGAGAACAC...TCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR CCA 90 bp TGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGACAGTTCCCCATCCCGAAGTaGGATGGATTTCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: CLQCGLMRIGTSPTISRQFPIPK*DGFPHL
Trigger: CAGATGAGGAAATCCATCCCACTTCGGGATGGGGAA...CTGTCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR TCA 90 bp TCCTTTCCTTACTTTACAGGTGGTCCTAAAGAAGGAGAGAAACTTTCCTGGCAGTTGTTCACATCGCTTTaGGATTTTCTTGTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: SFPYFTGGPKEGEKLSWQLFTSL*DFLVVF
Trigger: AAAGACCACAAGAAAATCTCAAAGCGATGTGAACAA...CTGCCAGGAAAGTTTCTCTCCTTCTTTAGGACCACCTGTAAAGTAAGGAAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR TCA 90 bp TGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGACAGAAATGGTGTTCTCTTTaGCCTGGATCTCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: CLQCGLMRIGTSPTISRQKWCSL*PGSPPA
Trigger: TGCAGGAGGAGATCCAGGTCAAAGAGAACACCATTT...CTGTCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR GCA 90 bp TACTGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGACCTTCTCCACATTGGTaGTGGAGAAGTCCAACCAGT +
Preference number: 4 (lower is better)
Translates to: YCLQCGLMRIGTSPTISRPSPHW*WRSPTS
Trigger: ACTGGTTGGACTTCTCCAGCACCAATGTGGAGAAGG...TCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR GCA 90 bp TACTGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGACCACATCACACTGCTTaGGCAGATCATTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: YCLQCGLMRIGTSPTISRPHHTA*ADHWLS
Trigger: AGACAGCCAATGATCTGCGCAAGCAGTGTGATGTGG...TCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR GCA 90 bp TACTGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGATCCACCACATCACACTaGTTGCGCAGATCATTGGCT +
Preference number: 4 (lower is better)
Translates to: YCLQCGLMRIGTSPTISRSTTSH*LRRSLA
Trigger: AGCCAATGATCTGCGCAAGCAGTGTGATGTGGTGGA...TCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR CCA 90 bp TGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGACAGTCTCCACATTGGTGCTaGAGAAGTCCAACCAGTCTT +
Preference number: 4 (lower is better)
Translates to: CLQCGLMRIGTSPTISRQSPHWC*RSPTSL
Trigger: AAGACTGGTTGGACTTCTCCAGCACCAATGTGGAGA...CTGTCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR CCA 90 bp TACTGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGAAGATCATTGGCTGTCTaGGACAGGATTCGATCCACC +
Preference number: 4 (lower is better)
Translates to: YCLQCGLMRIGTSPTISRRSLAV*DRIRST
Trigger: GGTGGATCGAATCCTGTCCCAGACAGCCAATGATCT...TCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR CCA 90 bp AGAGCTCTGTACTACTGTAACTACTGTTTACAATGTGGTTTAATGAGAATTGGACAGCCAGCTTGTCCCTaGCATCCTTTGTATCCTTCA +
Preference number: 4 (lower is better)
Translates to: RALYYCNYCLQCGLMRIGQPACP*HPLYPS
Trigger: TGAAGGATACAAAGGATGCCAGGGACAAGCTGGCTG...TCCAATTCTCATTAAACCACATTGTAAACAGTAGTTACAGTAGTACAGAGCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338694.7
ENST00000575592.1
CDS-3UTR TCA 90 bp TGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGACAGTTGTGGGTGATCTCTTaGACCTCCTTCATTAGCCTA +
Preference number: 4 (lower is better)
Translates to: CLQCGLMRIGTSPTISRQLWVIS*TSFISL
Trigger: TAGGCTAATGAAGGAGGTTCAAGAGATCACCCACAA...CTGTCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CCA 90 bp TACTGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGACATCCCGAAGTGGGATaGATTTCCTCATCTGCATAC +
Preference number: 4 (lower is better)
Translates to: YCLQCGLMRIGTSPTISRHPEVG*ISSSAY
Trigger: GTATGCAGATGAGGAAATCCATCCCACTTCGGGATG...TCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR CCA 90 bp AGAGCTCTGTACTACTGTAACTACTGTTTACAATGTGGTTTAATGAGAATTGGACATCCCGAAGTGGGATaGATTTCCTCATCTGCATAC +
Preference number: 4 (lower is better)
Translates to: RALYYCNYCLQCGLMRIGHPEVG*ISSSAY
Trigger: GTATGCAGATGAGGAAATCCATCCCACTTCGGGATG...TCCAATTCTCATTAAACCACATTGTAAACAGTAGTTACAGTAGTACAGAGCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338694.7
ENST00000575592.1
CDS-3UTR CCA 90 bp TGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGACAGAGTTTCCTTCAATCTTaGCCAGATGATCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: CLQCGLMRIGTSPTISRQSFLQS*PDDQPA
Trigger: AGCTGGCTGATCATCTGGCCAAGATTGAAGGAAACT...CTGTCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572291.1
CDS-3UTR GCA 90 bp TACTGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGAATGGATTTCCTCATCTaGATACACAGCACTTCGTCG +
Preference number: 4 (lower is better)
Translates to: YCLQCGLMRIGTSPTISRMDFLI*IHSTSS
Trigger: CGACGAAGTGCTGTGTATGCAGATGAGGAAATCCAT...TCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR CCA 90 bp AGAGCTCTGTACTACTGTAACTACTGTTTACAATGTGGTTTAATGAGAATTGGATCTGCTCTGTGGTACTaGTTCTTGTTAGCAATGTGC +
Preference number: 4 (lower is better)
Translates to: RALYYCNYCLQCGLMRIGSALWY*FLLAMC
Trigger: GCACATTGCTAACAAGAACCAGTACCACAGAGCAGA...TCCAATTCTCATTAAACCACATTGTAAACAGTAGTTACAGTAGTACAGAGCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338694.7
ENST00000575592.1
CDS GCA 90 bp CACTTCCAAGCTCTCAGCCAGCTGCAAGGACGAGCCGCTAGGTCTTaGCTATCTGAGAAGCACTGGGTCACCCGCGAGGAGGAAGACGGC +
Preference number: 5 (lower is better)
Translates to: HFQALSQLQGRAARS*LSEKHWVTREEEDG
Trigger: GCCGTCTTCCTCCTCGCGGGTGACCCAGTGCTTCTCAGATAGGCAAGACCTAGCGGCTCGTCCTTGCAGCTGGCTGAGAGCTTGGAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573966.1
CDS CCA 90 bp CAGCTGCAAGGACGAGCCGCTAGGTCTTGCCTATCTGAGAAGCACTaGGTCACCCGCGAGGAGGAAGACGGCAAGGCCCACTCACTTTGG +
Preference number: 5 (lower is better)
Translates to: QLQGRAARSCLSEKH*VTREEEDGKAHSLW
Trigger: CCAAAGTGAGTGGGCCTTGCCGTCTTCCTCCTCGCGGGTGACCCAGTGCTTCTCAGATAGGCAAGACCTAGCGGCTCGTCCTTGCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573966.1
CDS GCA 90 bp TGCTGCCTTTGCCCCAAGCCCACCACTTCCAAGCTCTCAGCCAGCTaGAAGGACGAGCCGCTAGGTCTTGCCTATCTGAGAAGCACTGGG +
Preference number: 5 (lower is better)
Translates to: CCLCPKPTTSKLSAS*KDEPLGLAYLRSTG
Trigger: CCCAGTGCTTCTCAGATAGGCAAGACCTAGCGGCTCGTCCTTGCAGCTGGCTGAGAGCTTGGAAGTGGTGGGCTTGGGGCAAAGGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573966.1
CDS GCA 90 bp GGAGCCTCTGGGCCCAATGTCAAGGTCACCATTCAATGCTGCCTTTaGCCCAAGCCCACCACTTCCAAGCTCTCAGCCAGCTGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: GASGPNVKVTIQCCL*PKPTTSKLSASCKD
Trigger: GTCCTTGCAGCTGGCTGAGAGCTTGGAAGTGGTGGGCTTGGGGCAAAGGCAGCATTGAATGGTGACCTTGACATTGGGCCCAGAGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573966.1
CDS GCA 90 bp GAATCAGGAGCCTCTGGGCCCAATGTCAAGGTCACCATTCAATGCTaGCTTTGCCCCAAGCCCACCACTTCCAAGCTCTCAGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: ESGASGPNVKVTIQC*LCPKPTTSKLSASC
Trigger: GCAGCTGGCTGAGAGCTTGGAAGTGGTGGGCTTGGGGCAAAGGCAGCATTGAATGGTGACCTTGACATTGGGCCCAGAGGCTCCTGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573966.1
CDS GCA 90 bp GGAGAATCAGGAGCCTCTGGGCCCAATGTCAAGGTCACCATTCAATaGTGCCTTTGCCCCAAGCCCACCACTTCCAAGCTCTCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: GESGASGPNVKVTIQ*CLCPKPTTSKLSAS
Trigger: GCTGGCTGAGAGCTTGGAAGTGGTGGGCTTGGGGCAAAGGCAGCATTGAATGGTGACCTTGACATTGGGCCCAGAGGCTCCTGATTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573966.1
CDS-3UTR CAA 90 bp GATCCACCAGCTGATCTGAATCACATCTCCCTGCAGAGCCTGGGATCTGAATCCGAGGGGCCTCCCTCCTaGATTGAGGCATGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: DPPADLNHISLQSLGSESEGPPS*IEAWEG
Trigger: CCCTTCCCATGCCTCAATCAAGGAGGGAGGCCCCTC...GGATTCAGATCCCAGGCTCTGCAGGGAGATGTGATTCAGATCAGCTGGTGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS CCA 90 bp TCCAAATTCCTCAGCGCCACACAGAACCACTACGCAAGCTCGGGATaGGAGCCTCCTTACCCCAACTGGAGCTTCCAGCTCTTGCAGAAC +
Preference number: 5 (lower is better)
Translates to: SKFLSATQNHYASSG*EPPYPNWSFQLLQN
Trigger: GTTCTGCAAGAGCTGGAAGCTCCAGTTGGGGTAAGGAGGCTCCCATCCCGAGCTTGCGTAGTGGTTCTGTGTGGCGCTGAGGAATTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338694.7
ENST00000573966.1
ENST00000575592.1
CDS CCA 90 bp CAGAACCACTACGCAAGCTCGGGATGGGAGCCTCCTTACCCCAACTaGAGCTTCCAGCTCTTGCAGAACAGAGAGGTAAACAACGCGGTC +
Preference number: 5 (lower is better)
Translates to: QNHYASSGWEPPYPN*SFQLLQNREVNNAV
Trigger: GACCGCGTTGTTTACCTCTCTGTTCTGCAAGAGCTGGAAGCTCCAGTTGGGGTAAGGAGGCTCCCATCCCGAGCTTGCGTAGTGGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573966.1
ENST00000575592.1
CDS-3UTR CAA 90 bp GCCTGGGATCTGAATCCACCACTGAGGCTGGCTGCCTCTGAGAGCTGTATTCACTGCTTGCGCAGATCATaGGCTGTCTGGGACAGGATT +
Preference number: 5 (lower is better)
Translates to: AWDLNPPLRLAASESCIHCLRRS*AVWDRI
Trigger: AATCCTGTCCCAGACAGCCAATGATCTGCGCAAGCA...GTGAATACAGCTCTCAGAGGCAGCCAGCCTCAGTGGTGGATTCAGATCCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp AATCTGCTCGGAAGCCTCCTCCAAGGTACGGGTCAGCAGAGCCATAATGCCCTGTCCTTCAGCCCATTCTaGAATGCCGTGTCCACCACA +
Preference number: 5 (lower is better)
Translates to: NLLGSLLQGTGQQSHNALSFSPF*NAVSTT
Trigger: TGTGGTGGACACGGCATTCAAGAATGGGCTGAAGGA...CAGGGCATTATGGCTCTGCTGACCCGTACCTTGGAGGAGGCTTCCGAGCAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CAA 90 bp GAGCGGTTCATCCGAATCTGCTCGGAAGCCTCCTCCAAGGTACGGGTCAGCAGATGTCCCTGGCATCCTTaGTATCCTTCAGCCCATTCT +
Preference number: 5 (lower is better)
Translates to: ERFIRICSEASSKVRVSRCPWHP*YPSAHS
Trigger: AGAATGGGCTGAAGGATACAAAGGATGCCAGGGACA...TCTGCTGACCCGTACCTTGGAGGAGGCTTCCGAGCAGATTCGGATGAACCGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS TCA 90 bp ACAAGCCTCTGGCTTTCTGCGACCAGGCGTTCTGATCGGGACCTTTaGGCGTCTGCTCTGTGGTACTGGTTCTTGTTAGCAATGTGCCAC +
Preference number: 5 (lower is better)
Translates to: TSLWLSATRRSDRDL*ASALWYWFLLAMCH
Trigger: GTGGCACATTGCTAACAAGAACCAGTACCACAGAGCAGACGCTCAAAGGTCCCGATCAGAACGCCTGGTCGCAGAAAGCCAGAGGCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338694.7
ENST00000573966.1
ENST00000575592.1
CDS TCA 90 bp TCCTGCAGGGCAAGCTGTCTGCGATGCAGCCCTTTCAGCTCTGCCTaGGCTTGGGCTAAAGTTTCCTTCAATCTTGGCCAGATGATCAGC +
Preference number: 5 (lower is better)
Translates to: SCRASCLRCSPFSSA*AWAKVSFNLGQMIS
Trigger: GCTGATCATCTGGCCAAGATTGAAGGAAACTTTAGCCCAAGCTCAGGCAGAGCTGAAAGGGCTGCATCGCAGACAGCTTGCCCTGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572291.1
CDS-3UTR CAA 90 bp GCCTGGGATCTGAATCCACCACTGAGGCTGGCTGCCTCTGAGAGCTGTATTCACTCTGAGGGCAGGAACTaGGGTGGAGGTTGTAATAGT +
Preference number: 5 (lower is better)
Translates to: AWDLNPPLRLAASESCIHSEGRN*GGGCNS
Trigger: ACTATTACAACCTCCACCCAAGTTCCTGCCCTCAGA...GTGAATACAGCTCTCAGAGGCAGCCAGCCTCAGTGGTGGATTCAGATCCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp ATCACATCTCCCTGCAGAGCCTGGGATCTGAATCCACCACTGAGGCTGGCTGCCTTCTCAAGATTGTACTaGGCAGAGCGGTTCATCCGA +
Preference number: 5 (lower is better)
Translates to: ITSPCRAWDLNPPLRLAAFSRLY*AERFIR
Trigger: TCGGATGAACCGCTCTGCCAAGTACAATCTTGAGAA...GGCAGCCAGCCTCAGTGGTGGATTCAGATCCCAGGCTCTGCAGGGAGATGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp GCCCAGACCCCATGGTCTTCCCCATCCCGAAGTGGGATGGATTTCCTCATCTGCTTCTCAAGATTGTACTaGGCAGAGCGGTTCATCCGA +
Preference number: 5 (lower is better)
Translates to: AQTPWSSPSRSGMDFLICFSRLY*AERFIR
Trigger: TCGGATGAACCGCTCTGCCAAGTACAATCTTGAGAA...GCAGATGAGGAAATCCATCCCACTTCGGGATGGGGAAGACCATGGGGTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CAA 90 bp TCTCCACATTGGTGCTGGAGAAGTCCAACCAGTCTTCCAGACTCACGGAGTTTGCCAGACTCACGGAGTTaGGCTCAATCCTCACGGCGT +
Preference number: 5 (lower is better)
Translates to: SPHWCWRSPTSLPDSRSLPDSRS*AQSSRR
Trigger: ACGCCGTGAGGATTGAGCCAAACTCCGTGAGTCTGG...CAAACTCCGTGAGTCTGGAAGACTGGTTGGACTTCTCCAGCACCAATGTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CAA 90 bp TGGCTGTCTGGGACAGGATTCGATCCACCAGGGCTTTCAGCATCAGGGAGTTGTTCAGCCTTCTCCACATaGGTGCTGGAGAAGTCCAAC +
Preference number: 5 (lower is better)
Translates to: WLSGTGFDPPGLSASGSCSAFST*VLEKSN
Trigger: GTTGGACTTCTCCAGCACCAATGTGGAGAAGGCTGA...ACAACTCCCTGATGCTGAAAGCCCTGGTGGATCGAATCCTGTCCCAGACAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CAA 90 bp CGCCCCTATAGCCCTGTGAGTGGGGACTATTGGAGGTCCTATACTCAGATGGCAGGAAGGGCTGTGTATTaGCTGAGCACTCTGAGAGGA +
Preference number: 5 (lower is better)
Translates to: RPYSPVSGDYWRSYTQMAGRAVY*LSTLRG
Trigger: TCCTCTCAGAGTGCTCAGCAAATACACAGCCCTTCC...TGCCATCTGAGTATAGGACCTCCAATAGTCCCCACTCACAGGGCTATAGGGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp TCGGAAGCCTCCTCCAAGGTACGGGTCAGCAGAGCCATAATGCCCTGGATGATCCTGTGGTACTGGTTCTaGTTAGCAATGTGCCACTCT +
Preference number: 5 (lower is better)
Translates to: SEASSKVRVSRAIMPWMILWYWF*LAMCHS
Trigger: AGAGTGGCACATTGCTAACAAGAACCAGTACCACAG...GATCATCCAGGGCATTATGGCTCTGCTGACCCGTACCTTGGAGGAGGCTTCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CAA 90 bp TTCACAAGGAAGGATTTTGCCCAGTGTCTTCACACCCTGCCAGCCACATCCTCTTTCAGCATCAGGGAGTaGTTCCGCTGCTTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: FTRKDFAQCLHTLPATSSFSIRE*FRCLSA
Trigger: GGCTGACAAGCAGCGGAACAACTCCCTGATGCTGAA...AGAGGATGTGGCTGGCAGGGTGTGAAGACACTGGGCAAAATCCTTCCTTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp ACAGGATTCGATCCACCAGGGCTTTCAGCATCAGGGAGTTGTTCCGCTGCTTGTACCACATCACACTGCTaGCGCAGATCATTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: TGFDPPGLSASGSCSAACTTSHC*RRSLAV
Trigger: GACAGCCAATGATCTGCGCAAGCAGTGTGATGTGGT...ACAAGCAGCGGAACAACTCCCTGATGCTGAAAGCCCTGGTGGATCGAATCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CAA 90 bp GCTGGGAAGGCTTATTTGGACTCTTCCGAGCCAGAGCAGAAAAGCACCCAGAGGTCACAAGGAAGGATTTaGCCCAGTGTCTTCACACCC +
Preference number: 5 (lower is better)
Translates to: AGKAYLDSSEPEQKSTQRSQGRI*PSVFTP
Trigger: GGGTGTGAAGACACTGGGCAAAATCCTTCCTTGTGA...CCTCTGGGTGCTTTTCTGCTCTGGCTCGGAAGAGTCCAAATAAGCCTTCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp TTGGCAGAGCGGTTCATCCGAATCTGCTCGGAAGCCTCCTCCAAGGTACGGGTCATGTTTGGTGAGTTGTaGTTGAGCGAGAAGCAGATA +
Preference number: 5 (lower is better)
Translates to: LAERFIRICSEASSKVRVMFGEL*LSEKQI
Trigger: TATCTGCTTCTCGCTCAACAACAACTCACCAAACAT...GACCCGTACCTTGGAGGAGGCTTCCGAGCAGATTCGGATGAACCGCTCTGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CAA 90 bp ATTTGGACTCTTCCGAGCCAGAGCAGAAAAGCACCCAGAGGCTTCCCAGTGAGCCTGATGTTTGGTGAGTaGTTGTTGAGCGAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: IWTLPSQSRKAPRGFPVSLMFGE*LLSEKQ
Trigger: CTGCTTCTCGCTCAACAACAACTCACCAAACATCAG...GCTCACTGGGAAGCCTCTGGGTGCTTTTCTGCTCTGGCTCGGAAGAGTCCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp CCATTCTTGAATGCCGTGTCCACCACATCACACTGCTTGCGCAGATCATTGGCTGAGTTGTTCCGCTGCTaGTCAGCCTTCTCCACATTG +
Preference number: 5 (lower is better)
Translates to: PFLNAVSTTSHCLRRSLAELFRC*SAFSTL
Trigger: CAATGTGGAGAAGGCTGACAAGCAGCGGAACAACTC...AGCCAATGATCTGCGCAAGCAGTGTGATGTGGTGGACACGGCATTCAAGAATGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CAA 90 bp CTGGATGAGTACTGGCCTGCCATGAACTTGTCTTGTGCCTTGGGGCAAGAATTTTTCAGCATCAGGGAGTaGTTCCGCTGCTTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: LDEYWPAMNLSCALGQEFFSIRE*FRCLSA
Trigger: GGCTGACAAGCAGCGGAACAACTCCCTGATGCTGAA...AAATTCTTGCCCCAAGGCACAAGACAAGTTCATGGCAGGCCAGTACTCATCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS-3UTR CAA 90 bp GCTGGGAAGGCTTATTTGGACTCTTCCGAGCCAGAGCAGAAAAGCACCCAGAGGCAAGGAGCACCTAGATaGCAAAGCTCCCAGGAATTA +
Preference number: 5 (lower is better)
Translates to: AGKAYLDSSEPEQKSTQRQGAPR*QSSQEL
Trigger: TAATTCCTGGGAGCTTTGCAATCTAGGTGCTCCTTG...CCTCTGGGTGCTTTTCTGCTCTGGCTCGGAAGAGTCCAAATAAGCCTTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS TCA 90 bp TTCAATTTCATCCACAAGCCTCTGGCTTTCTGCGACCAGGCGTTCTaGTCGGGACCTTTGAGCGTCTGCTCTGTGGTACTGGTTCTTGTT +
Preference number: 5 (lower is better)
Translates to: FNFIHKPLAFCDQAF*SGPLSVCSVVLVLV
Trigger: AACAAGAACCAGTACCACAGAGCAGACGCTCAAAGGTCCCGATCAGAACGCCTGGTCGCAGAAAGCCAGAGGCTTGTGGATGAAATTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338694.7
ENST00000573966.1
ENST00000575592.1
CDS GCA 90 bp ATGCCAATGCGCTTCTCCCTGTATGCCAGGCATGTCTCAGTGATGTaGAAGGGCTCTTTCAAGGTCTCCAGGGCTTTTTCCAATCTGATC +
Preference number: 5 (lower is better)
Translates to: MPMRFSLYARHVSVM*KGSFKVSRAFSNLI
Trigger: GATCAGATTGGAAAAAGCCCTGGAGACCTTGAAAGAGCCCTTGCACATCACTGAGACATGCCTGGCATACAGGGAGAAGCGCATTGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp GCAGCTCAGCGGAAGGCAGCCTCCCACAAGTTGAACTCTTTTTGGAAAAGAAACACCACATCACACTGCTaGCGCAGATCATTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: AAQRKAASHKLNSFWKRNTTSHC*RRSLAV
Trigger: GACAGCCAATGATCTGCGCAAGCAGTGTGATGTGGT...GTTTCTTTTCCAAAAAGAGTTCAACTTGTGGGAGGCTGCCTTCCGCTGAGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp CCCTTTCTGATGGCAAAGAGTCTCTGGACCAAGGAGCACCTAGATTGCAAAGCTTCCTTCAGCCCATTCTaGAATGCCGTGTCCACCACA +
Preference number: 5 (lower is better)
Translates to: PFLMAKSLWTKEHLDCKASFSPF*NAVSTT
Trigger: TGTGGTGGACACGGCATTCAAGAATGGGCTGAAGGA...AGCTTTGCAATCTAGGTGCTCCTTGGTCCAGAGACTCTTTGCCATCAGAAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp CTGGATGAGTACTGGCCTGCCATGAACTTGTCTTGTGCCTTGGGGCAAGAATTTTCCTTCAGCCCATTCTaGAATGCCGTGTCCACCACA +
Preference number: 5 (lower is better)
Translates to: LDEYWPAMNLSCALGQEFSFSPF*NAVSTT
Trigger: TGTGGTGGACACGGCATTCAAGAATGGGCTGAAGGA...AAATTCTTGCCCCAAGGCACAAGACAAGTTCATGGCAGGCCAGTACTCATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS-3UTR CAA 90 bp GCCCAGACCCCATGGTCTTCCCCATCCCGAAGTGGGATGGATTTCCTCATCTGCAAATATGGAGTTGAATaGTTAGGCAAACACCACACC +
Preference number: 5 (lower is better)
Translates to: AQTPWSSPSRSGMDFLICKYGVE*LGKHHT
Trigger: GGTGTGGTGTTTGCCTAACAATTCAACTCCATATTT...GCAGATGAGGAAATCCATCCCACTTCGGGATGGGGAAGACCATGGGGTCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CAA 90 bp CGCCCCTATAGCCCTGTGAGTGGGGACTATTGGAGGTCCTATACTCAGATGGCACACTCTGCATTATCATaGTGCCCTATGACACCGTAT +
Preference number: 5 (lower is better)
Translates to: RPYSPVSGDYWRSYTQMAHSALS*CPMTPY
Trigger: ATACGGTGTCATAGGGCACAATGATAATGCAGAGTG...TGCCATCTGAGTATAGGACCTCCAATAGTCCCCACTCACAGGGCTATAGGGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp CTAGACAGCCAGATTCAGGGAACAGCAAGGACAGGAAGAGTTCCAGACGATATAGCTGGGAAGGCTTATTaGGACTCTTCCGAGCCAGAG +
Preference number: 5 (lower is better)
Translates to: LDSQIQGTARTGRVPDDIAGKAY*DSSEPE
Trigger: CTCTGGCTCGGAAGAGTCCAAATAAGCCTTCCCAGC...TATATCGTCTGGAACTCTTCCTGTCCTTGCTGTTCCCTGAATCTGGCTGTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp GATCCACCAGCTGATCTGAATCACATCTCCCTGCAGAGCCTGGGATCTGAATCCGTTCCAGACACTGTGTaGAGAGTCTTCCACACGTTA +
Preference number: 5 (lower is better)
Translates to: DPPADLNHISLQSLGSESVPDTV*RVFHTL
Trigger: TAACGTGTGGAAGACTCTCAACACAGTGTCTGGAAC...GGATTCAGATCCCAGGCTCTGCAGGGAGATGTGATTCAGATCAGCTGGTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp TGTGATGTTGAACATAGATGTGAATGGCCAAGTTTGATGGCCCCAAACCTGGCTCCCCAAACCTGGCTTTaGGAGCCAGGTGTCTGGATG +
Preference number: 5 (lower is better)
Translates to: CDVEHRCEWPSLMAPNLAPQTWL*EPGVWM
Trigger: CATCCAGACACCTGGCTCCAAAAGCCAGGTTTGGGG...AGCCAGGTTTGGGGCCATCAAACTTGGCCATTCACATCTATGTTCAACATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS-3UTR CAA 90 bp GAGTACTGGCCTGCCATGAACTTGTCTTGTGCCTTGGGGCAAGAATTTAACCTCTGTGAATGGCCAAGTTaGATGGCCCCAAACCTGGCT +
Preference number: 5 (lower is better)
Translates to: EYWPAMNLSCALGQEFNLCEWPS*MAPNLA
Trigger: AGCCAGGTTTGGGGCCATCAAACTTGGCCATTCACA...GAGGTTAAATTCTTGCCCCAAGGCACAAGACAAGTTCATGGCAGGCCAGTACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS TCA 90 bp GGGCAAGAATTTAACCTCCTTGAGTTTCAGCTTCTCTTGGCCAGATaGTCAGCCAGCTTGTCCCTGGCATCCTTTGTATCCTTCAGCCCA +
Preference number: 5 (lower is better)
Translates to: GQEFNLLEFQLLLAR*SASLSLASFVSFSP
Trigger: TGGGCTGAAGGATACAAAGGATGCCAGGGACAAGCTGGCTGATCATCTGGCCAAGAGAAGCTGAAACTCAAGGAGGTTAAATTCTTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS CCA 90 bp GTGCCTTGGGGCAAGAATTTAACCTCCTTGAGTTTCAGCTTCTCTTaGCCAGATGATCAGCCAGCTTGTCCCTGGCATCCTTTGTATCCT +
Preference number: 5 (lower is better)
Translates to: VPWGKNLTSLSFSFS*PDDQPACPWHPLYP
Trigger: AGGATACAAAGGATGCCAGGGACAAGCTGGCTGATCATCTGGCCAAGAGAAGCTGAAACTCAAGGAGGTTAAATTCTTGCCCCAAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS-3UTR CAA 90 bp TTTCTGATGGCAAAGAGTCTCTGGACCAAGGAGCACCTAGATTGCAAAGCTCCCCTGTGGTACTGGTTCTaGTTAGCAATGTGCCACTCT +
Preference number: 5 (lower is better)
Translates to: FLMAKSLWTKEHLDCKAPLWYWF*LAMCHS
Trigger: AGAGTGGCACATTGCTAACAAGAACCAGTACCACAG...GGGAGCTTTGCAATCTAGGTGCTCCTTGGTCCAGAGACTCTTTGCCATCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp CCACATCACACTGCTTGCGCAGATCATTGGCTGTCTGGGACAGGATTCGATCCATTTGGTGAGTTGTTGTaGAGCGAGAAGCAGATATCA +
Preference number: 5 (lower is better)
Translates to: PHHTACADHWLSGTGFDPFGELL*SEKQIS
Trigger: TGATATCTGCTTCTCGCTCAACAACAACTCACCAAA...TGGATCGAATCCTGTCCCAGACAGCCAATGATCTGCGCAAGCAGTGTGATGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CAA 90 bp TGTGATGTTGAACATAGATGTGAATGGCCAAGTTTGATGGCCCCAAACCTGGCTGAGTTGTTCCGCTGCTaGTCAGCCTTCTCCACATTG +
Preference number: 5 (lower is better)
Translates to: CDVEHRCEWPSLMAPNLAELFRC*SAFSTL
Trigger: CAATGTGGAGAAGGCTGACAAGCAGCGGAACAACTC...AGCCAGGTTTGGGGCCATCAAACTTGGCCATTCACATCTATGTTCAACATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS-3UTR CAA 90 bp TTTGGCTCAATCCTCACGGCGTTCTCAGAATATCTGATGTTTGGTGAGTTGTTGTTCAGCATCAGGGAGTaGTTCCGCTGCTTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: FGSILTAFSEYLMFGELLFSIRE*FRCLSA
Trigger: GGCTGACAAGCAGCGGAACAACTCCCTGATGCTGAA...CAACAACTCACCAAACATCAGATATTCTGAGAACGCCGTGAGGATTGAGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CAA 90 bp ATGTTTGGTGAGTTGTTGTTGAGCGAGAAGCAGATATCATCTATGGTCAGGGCCTGCTTGCGCAGATCATaGGCTGTCTGGGACAGGATT +
Preference number: 5 (lower is better)
Translates to: MFGELLLSEKQISSMVRACLRRS*AVWDRI
Trigger: AATCCTGTCCCAGACAGCCAATGATCTGCGCAAGCA...GGCCCTGACCATAGATGATATCTGCTTCTCGCTCAACAACAACTCACCAAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CAA 90 bp GCCAAGAGAAAGGTTAGCATCCCATCTCATGAGCAAGAGGGGCATGGTCTACACGCAGCCTCCCACAAGTaGAACTCTTTTTGGAAAAGA +
Preference number: 5 (lower is better)
Translates to: AKRKVSIPSHEQEGHGLHAASHK*NSFWKR
Trigger: TCTTTTCCAAAAAGAGTTCAACTTGTGGGAGGCTGC...GTGTAGACCATGCCCCTCTTGCTCATGAGATGGGATGCTAACCTTTCTCTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp TGGCCTCAAAGGGGGTTTCTCCATCCCAGATTGGGAACATCCCTTTCTGATGGCAGCAAATGTCTTCCTTaGACAGTCACCCACATAGAT +
Preference number: 5 (lower is better)
Translates to: WPQRGFLHPRLGTSLSDGSKCLP*TVTHID
Trigger: ATCTATGTGGGTGACTGTCAAAGGAAGACATTTGCT...GCCATCAGAAAGGGATGTTCCCAATCTGGGATGGAGAAACCCCCTTTGAGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp CTGGCAGTGTTGCAACTAGAAGCTAGGTCTCCTGAGCCCCACACCGTCAGCTGTTTTTATGTCTACATGTaGAGAAATGGCCTCAACCAT +
Preference number: 5 (lower is better)
Translates to: LAVLQLEARSPEPHTVSCFYVYM*RNGLNH
Trigger: ATGGTTGAGGCCATTTCTCAACATGTAGACATAAAA...ACAGCTGACGGTGTGGGGCTCAGGAGACCTAGCTTCTAGTTGCAACACTGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp CCCTTTCTGATGGCAAAGAGTCTCTGGACCAAGGAGCACCTAGATTGCAAAGCTAAATCCTTCTCAAGATaGTACTTGGCAGAGCGGTTC +
Preference number: 5 (lower is better)
Translates to: PFLMAKSLWTKEHLDCKAKSFSR*YLAERF
Trigger: GAACCGCTCTGCCAAGTACAATCTTGAGAAGGATTT...AGCTTTGCAATCTAGGTGCTCCTTGGTCCAGAGACTCTTTGCCATCAGAAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp AAAGAAATTTTGAGAGCCAAGAGAAAGGTTAGCATCCCATCTCATGAGCAAGAGCCAGACTCACGGAGTTaGGCTCAATCCTCACGGCGT +
Preference number: 5 (lower is better)
Translates to: KEILRAKRKVSIPSHEQEPDSRS*AQSSRR
Trigger: ACGCCGTGAGGATTGAGCCAAACTCCGTGAGTCTGG...CTCTTGCTCATGAGATGGGATGCTAACCTTTCTCTTGGCTCTCAAAATTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp TCCTTTCCTTACTTTACAGGTGGTCCTAAAGAAGGAGAGAAACTTTCCTGGCAGTCAGCCTTCTCCACATaGGTGCTGGAGAAGTCCAAC +
Preference number: 5 (lower is better)
Translates to: SFPYFTGGPKEGEKLSWQSAFST*VLEKSN
Trigger: GTTGGACTTCTCCAGCACCAATGTGGAGAAGGCTGA...CTGCCAGGAAAGTTTCTCTCCTTCTTTAGGACCACCTGTAAAGTAAGGAAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp TCCTTTCCTTACTTTACAGGTGGTCCTAAAGAAGGAGAGAAACTTTCCTGGCAGGAGTTGTTCCGCTGCTaGTCAGCCTTCTCCACATTG +
Preference number: 5 (lower is better)
Translates to: SFPYFTGGPKEGEKLSWQELFRC*SAFSTL
Trigger: CAATGTGGAGAAGGCTGACAAGCAGCGGAACAACTC...CTGCCAGGAAAGTTTCTCTCCTTCTTTAGGACCACCTGTAAAGTAAGGAAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp GATGTTGAACATAGATGTGAATGGCCAAGTTTGATGGCCCCAAACCTGGCTTTTTGCTTGCGCAGATCATaGGCTGTCTGGGACAGGATT +
Preference number: 5 (lower is better)
Translates to: DVEHRCEWPSLMAPNLAFCLRRS*AVWDRI
Trigger: AATCCTGTCCCAGACAGCCAATGATCTGCGCAAGCA...AAAAGCCAGGTTTGGGGCCATCAAACTTGGCCATTCACATCTATGTTCAACATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS-3UTR CAA 90 bp TGTGATGTTGAACATAGATGTGAATGGCCAAGTTTGATGGCCCCAAACCTGGCTTGTCCCTGGCATCCTTaGTATCCTTCAGCCCATTCT +
Preference number: 5 (lower is better)
Translates to: CDVEHRCEWPSLMAPNLACPWHP*YPSAHS
Trigger: AGAATGGGCTGAAGGATACAAAGGATGCCAGGGACA...AGCCAGGTTTGGGGCCATCAAACTTGGCCATTCACATCTATGTTCAACATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS-3UTR CAA 90 bp AAATATGCTGAGACCGGGTCTGTGATGTTGAACATAGATGTGAATGGCCAAGTTTGGCCTGCCATGAACTaGTCTTGTGCCTTGGGGCAA +
Preference number: 5 (lower is better)
Translates to: KYAETGSVMLNIDVNGQVWPAMN*SCALGQ
Trigger: TTGCCCCAAGGCACAAGACAAGTTCATGGCAGGCCA...AACTTGGCCATTCACATCTATGTTCAACATCACAGACCCGGTCTCAGCATATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS TCA 90 bp CTTTGGCTCAATCCTCACGGCGTTCTCAGAATATCTGATGTTTGGTaGGTTGTTGTTGAGCGAGAAGCAGATATCATCTATGGTCAGGGC +
Preference number: 5 (lower is better)
Translates to: LWLNPHGVLRISDVW*VVVEREADIIYGQG
Trigger: GCCCTGACCATAGATGATATCTGCTTCTCGCTCAACAACAACTCACCAAACATCAGATATTCTGAGAACGCCGTGAGGATTGAGCCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573966.1
CDS-3UTR CAA 90 bp TGGGAGGGTGCTGAGATGGTAAGCCTCGTCCATGGAAAGTGTTCCTTCAATGTTACAAGCTGCTCAAGTTaGTCATCTAACTCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: WEGAEMVSLVHGKCSFNVTSCSS*SSNSFF
Trigger: GAAGAAGGAGTTAGATGACAAACTTGAGCAGCTTGT...AACATTGAAGGAACACTTTCCATGGACGAGGCTTACCATCTCAGCACCCTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp GAGTTGTTGTTGAGCGAGAAGCAGATATCATCTATGGTCAGGGCCACAAACTTGGTCAGGGCCACAAACTaGTCCTTCAAATCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: ELLLSEKQISSMVRATNLVRATN*SFKSFS
Trigger: TGAGAAGGATTTGAAGGACAAGTTTGTGGCCCTGAC...CAAGTTTGTGGCCCTGACCATAGATGATATCTGCTTCTCGCTCAACAACAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CAA 90 bp CCTTACTTTACAGGTGGTCCTAAAGAAGGAGAGAAACTTTCCTGGCAGTGTTGCACTTTCCTGGCAGTGTaGCAACTAGAAGCTAGGTCT +
Preference number: 5 (lower is better)
Translates to: PYFTGGPKEGEKLSWQCCTFLAV*QLEARS
Trigger: AGACCTAGCTTCTAGTTGCAACACTGCCAGGAAAGT...GCAACACTGCCAGGAAAGTTTCTCTCCTTCTTTAGGACCACCTGTAAAGTAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp TGGCCTGTGCTAAAATATGGAGTTGAATTGTTAGGCAAACACCACACCAGCATATCTGAGGGCAGGAACTaGGGTGGAGGTTGTAATAGT +
Preference number: 5 (lower is better)
Translates to: WPVLKYGVELLGKHHTSISEGRN*GGGCNS
Trigger: ACTATTACAACCTCCACCCAAGTTCCTGCCCTCAGA...TATGCTGGTGTGGTGTTTGCCTAACAATTCAACTCCATATTTTAGCACAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338694.7
ENST00000575592.1
CDS-3UTR CAA 90 bp TTTCTGATGGCAAAGAGTCTCTGGACCAAGGAGCACCTAGATTGCAAAGCTCCCCTTGTTCACATCGCTTaGAGATTTTCTTGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: FLMAKSLWTKEHLDCKAPLVHIA*RFSCGL
Trigger: AAGACCACAAGAAAATCTCAAAGCGATGTGAACAAG...GGGAGCTTTGCAATCTAGGTGCTCCTTGGTCCAGAGACTCTTTGCCATCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp GAATTAGGCCCACACTCTGCATTATCATTGTGCCCTATGACACCGTATGTGCAGTTTGGTGAGTTGTTGTaGAGCGAGAAGCAGATATCA +
Preference number: 5 (lower is better)
Translates to: ELGPHSALSLCPMTPYVQFGELL*SEKQIS
Trigger: TGATATCTGCTTCTCGCTCAACAACAACTCACCAAA...CTGCACATACGGTGTCATAGGGCACAATGATAATGCAGAGTGTGGGCCTAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp GAATTAGGCCCACACTCTGCATTATCATTGTGCCCTATGACACCGTATGTGCAGATGTTTGGTGAGTTGTaGTTGAGCGAGAAGCAGATA +
Preference number: 5 (lower is better)
Translates to: ELGPHSALSLCPMTPYVQMFGEL*LSEKQI
Trigger: TATCTGCTTCTCGCTCAACAACAACTCACCAAACAT...CTGCACATACGGTGTCATAGGGCACAATGATAATGCAGAGTGTGGGCCTAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp GCAGCTCAGCGGAAGGCAGCCTCCCACAAGTTGAACTCTTTTTGGAAAAGAAACAAATATGGAGTTGAATaGTTAGGCAAACACCACACC +
Preference number: 5 (lower is better)
Translates to: AAQRKAASHKLNSFWKRNKYGVE*LGKHHT
Trigger: GGTGTGGTGTTTGCCTAACAATTCAACTCCATATTT...GTTTCTTTTCCAAAAAGAGTTCAACTTGTGGGAGGCTGCCTTCCGCTGAGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp TGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGACAGTTCAGCATCAGGGAGTaGTTCCGCTGCTTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: CLQCGLMRIGTSPTISRQFSIRE*FRCLSA
Trigger: GGCTGACAAGCAGCGGAACAACTCCCTGATGCTGAA...CTGTCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR CAA 90 bp TCTCCTTTATTTTTCCACAAATATGCTGAGACCGGGTCTGTGATGTTGAACATAACCACATCACACTGCTaGCGCAGATCATTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: SPLFFHKYAETGSVMLNITTSHC*RRSLAV
Trigger: GACAGCCAATGATCTGCGCAAGCAGTGTGATGTGGT...TATGTTCAACATCACAGACCCGGTCTCAGCATATTTGTGGAAAAATAAAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS-3UTR CAA 90 bp AAAGAAATTTTGAGAGCCAAGAGAAAGGTTAGCATCCCATCTCATGAGCAAGAGTGTCCCTGGCATCCTTaGTATCCTTCAGCCCATTCT +
Preference number: 5 (lower is better)
Translates to: KEILRAKRKVSIPSHEQECPWHP*YPSAHS
Trigger: AGAATGGGCTGAAGGATACAAAGGATGCCAGGGACA...CTCTTGCTCATGAGATGGGATGCTAACCTTTCTCTTGGCTCTCAAAATTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp CGGAAGGCAGCCTCCCACAAGTTGAACTCTTTTTGGAAAAGAAACAGTAAGTATTGTGAGTGGGGACTATaGGAGGTCCTATACTCAGAT +
Preference number: 5 (lower is better)
Translates to: RKAASHKLNSFWKRNSKYCEWGL*EVLYSD
Trigger: ATCTGAGTATAGGACCTCCAATAGTCCCCACTCACA...ATACTTACTGTTTCTTTTCCAAAAAGAGTTCAACTTGTGGGAGGCTGCCTTCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp TGGCCTGTGCTAAAATATGGAGTTGAATTGTTAGGCAAACACCACACCAGCATAATTAAGCCAGTGCTTTaGGCCTCAAAGGGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: WPVLKYGVELLGKHHTSIIKPVL*ASKGVS
Trigger: AGAAACCCCCTTTGAGGCCAAAAGCACTGGCTTAAT...TATGCTGGTGTGGTGTTTGCCTAACAATTCAACTCCATATTTTAGCACAGGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp AAATATGCTGAGACCGGGTCTGTGATGTTGAACATAGATGTGAATGGCCAAGTTACCGGGTCTGTGATGTaGAACATAGATGTGAATGGC +
Preference number: 5 (lower is better)
Translates to: KYAETGSVMLNIDVNGQVTGSVM*NIDVNG
Trigger: GCCATTCACATCTATGTTCAACATCACAGACCCGGT...AACTTGGCCATTCACATCTATGTTCAACATCACAGACCCGGTCTCAGCATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS TCA 90 bp GTCAATGCCAATGCGCTTCTCCCTAGTTTCTTGTTCACATCGCTTTaGGATTTTCTTGTGGTCTTTTCAATTTCATCCACAAGCCTCTGG +
Preference number: 5 (lower is better)
Translates to: VNANALLPSFLFTSL*DFLVVFSISSTSLW
Trigger: CCAGAGGCTTGTGGATGAAATTGAAAAGACCACAAGAAAATCTCAAAGCGATGTGAACAAGAAACTAGGGAGAAGCGCATTGGCATTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573966.1
ENST00000575592.1
CDS CCA 90 bp TTCACAAGCTGCTCAAGTTTGTCATCTAACTCCTTCTTCCAGAACTaGACTTCCTCGAGTCTCTGTTCTAGTTTCTTGTTCACATCGCTT +
Preference number: 5 (lower is better)
Translates to: FTSCSSLSSNSFFQN*TSSSLCSSFLFTSL
Trigger: AAGCGATGTGAACAAGAAACTAGAACAGAGACTCGAGGAAGTCCAGTTCTGGAAGAAGGAGTTAGATGACAAACTTGAGCAGCTTGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp AAAGAAATTTTGAGAGCCAAGAGAAAGGTTAGCATCCCATCTCATGAGCAAGAGGTCAGGGCCACAAACTaGTCCTTCAAATCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: KEILRAKRKVSIPSHEQEVRATN*SFKSFS
Trigger: TGAGAAGGATTTGAAGGACAAGTTTGTGGCCCTGAC...CTCTTGCTCATGAGATGGGATGCTAACCTTTCTCTTGGCTCTCAAAATTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp CAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGACAGCATCAGCTGATGTTTGGTGAGTaGTTGTTGAGCGAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: QCGLMRIGTSPTISRQHQLMFGE*LLSEKQ
Trigger: CTGCTTCTCGCTCAACAACAACTCACCAAACATCAG...CTGATGCTGTCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CAA 90 bp TGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGACAGTCAGCCTTCTCCACATaGGTGCTGGAGAAGTCCAAC +
Preference number: 5 (lower is better)
Translates to: CLQCGLMRIGTSPTISRQSAFST*VLEKSN
Trigger: GTTGGACTTCTCCAGCACCAATGTGGAGAAGGCTGA...CTGTCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR CAA 90 bp TGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGACAGTCCTTCAGCCCATTCTaGAATGCCGTGTCCACCACA +
Preference number: 5 (lower is better)
Translates to: CLQCGLMRIGTSPTISRQSFSPF*NAVSTT
Trigger: TGTGGTGGACACGGCATTCAAGAATGGGCTGAAGGA...CTGTCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR CAA 90 bp CGGAAGGCAGCCTCCCACAAGTTGAACTCTTTTTGGAAAAGAAACAGTAAGTATTTTCTCCATCCCAGATaGGGAACATCCCTTTCTGAT +
Preference number: 5 (lower is better)
Translates to: RKAASHKLNSFWKRNSKYFLHPR*GTSLSD
Trigger: ATCAGAAAGGGATGTTCCCAATCTGGGATGGAGAAA...ATACTTACTGTTTCTTTTCCAAAAAGAGTTCAACTTGTGGGAGGCTGCCTTCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS TCA 90 bp TGGACTTCCTCGAGTCTCTGTTCTAGTTTCTTGTTCACATCGCTTTaGGATTTTCTTGTGGTCTTTTCAATTTCATCCACAAGCCTCTGG +
Preference number: 5 (lower is better)
Translates to: WTSSSLCSSFLFTSL*DFLVVFSISSTSLW
Trigger: CCAGAGGCTTGTGGATGAAATTGAAAAGACCACAAGAAAATCTCAAAGCGATGTGAACAAGAAACTAGAACAGAGACTCGAGGAAGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS-3UTR CAA 90 bp CAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGACAGCATCAGAAATCCTTCTCAAGATaGTACTTGGCAGAGCGGTTC +
Preference number: 5 (lower is better)
Translates to: QCGLMRIGTSPTISRQHQKSFSR*YLAERF
Trigger: GAACCGCTCTGCCAAGTACAATCTTGAGAAGGATTT...CTGATGCTGTCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575592.1
CDS-3UTR CAA 90 bp TACTGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGAGAGTTGTTCCGCTGCTaGTCAGCCTTCTCCACATTG +
Preference number: 5 (lower is better)
Translates to: YCLQCGLMRIGTSPTISRELFRC*SAFSTL
Trigger: CAATGTGGAGAAGGCTGACAAGCAGCGGAACAACTC...TCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR CAA 90 bp TACTGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGATGCTTGCGCAGATCATaGGCTGTCTGGGACAGGATT +
Preference number: 5 (lower is better)
Translates to: YCLQCGLMRIGTSPTISRCLRRS*AVWDRI
Trigger: AATCCTGTCCCAGACAGCCAATGATCTGCGCAAGCA...TCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR CAA 90 bp TACTGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGAACCACATCACACTGCTaGCGCAGATCATTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: YCLQCGLMRIGTSPTISRTTSHC*RRSLAV
Trigger: GACAGCCAATGATCTGCGCAAGCAGTGTGATGTGGT...TCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS-3UTR CAA 90 bp TGTTTACAATGTGGTTTAATGAGAATTGGAACTAGCCCTACTATTAGCAGACAGTGTCCCTGGCATCCTTaGTATCCTTCAGCCCATTCT +
Preference number: 5 (lower is better)
Translates to: CLQCGLMRIGTSPTISRQCPWHP*YPSAHS
Trigger: AGAATGGGCTGAAGGATACAAAGGATGCCAGGGACA...CTGTCTGCTAATAGTAGGGCTAGTTCCAATTCTCATTAAACCACATTGTAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572291.1
ENST00000575592.1
CDS GCA 90 bp AATCTGATCTTATATATGAGTAGATCATCAGTTACATTCACAAGCTaGTCAAGTTTGTCATCTAACTCCTTCTTCCAGAACTGGACTTCC +
Preference number: 5 (lower is better)
Translates to: NLILYMSRSSVTFTS*SSLSSNSFFQNWTS
Trigger: GGAAGTCCAGTTCTGGAAGAAGGAGTTAGATGACAAACTTGAGCAGCTTGTGAATGTAACTGATGATCTACTCATATATAAGATCAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS CCA 72 bp GGACGAGCCGCTAGGTCTTGCCTATCTGAGAAGCACTaGGTCACCCGCGAGGAGGAAGACGGCAAGGCCCAC +
Preference number: 6 (lower is better)
Translates to: GRAARSCLSEKH*VTREEEDGKAH
Trigger: GTGGGCCTTGCCGTCTTCCTCCTCGCGGGTGACCCAGTGCTTCTCAGATAGGCAAGACCTAGCGGCTCGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573966.1
CDS GCA 72 bp GCTCTCAGCCAGCTGCAAGGACGAGCCGCTAGGTCTTaGCTATCTGAGAAGCACTGGGTCACCCGCGAGGAG +
Preference number: 6 (lower is better)
Translates to: ALSQLQGRAARS*LSEKHWVTREE
Trigger: CTCCTCGCGGGTGACCCAGTGCTTCTCAGATAGGCAAGACCTAGCGGCTCGTCCTTGCAGCTGGCTGAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573966.1
CDS CCA 72 bp CTCAGCGCCACACAGAACCACTACGCAAGCTCGGGATaGGAGCCTCCTTACCCCAACTGGAGCTTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: LSATQNHYASSG*EPPYPNWSFQL
Trigger: GAGCTGGAAGCTCCAGTTGGGGTAAGGAGGCTCCCATCCCGAGCTTGCGTAGTGGTTCTGTGTGGCGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338694.7
ENST00000573966.1
ENST00000575592.1
CDS CAA 90 bp AGGAGCCTCTGGGCCCAATGTCAAGGTCACCATTCAATGCTGCCTTaGCCCCAAGCCCACCACTTCCAAGCTCTCAGCCAGCTGCAAGGA +
Preference number: 6 (lower is better)
Translates to: RSLWAQCQGHHSMLP*PQAHHFQALSQLQG
Trigger: TCCTTGCAGCTGGCTGAGAGCTTGGAAGTGGTGGGCTTGGGGCAAAGGCAGCATTGAATGGTGACCTTGACATTGGGCCCAGAGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573966.1
CDS TCA 72 bp ATCCACAAGCCTCTGGCTTTCTGCGACCAGGCGTTCTaGTCGGGACCTTTGAGCGTCTGCTCTGTGGTACTG +
Preference number: 6 (lower is better)
Translates to: IHKPLAFCDQAF*SGPLSVCSVVL
Trigger: CAGTACCACAGAGCAGACGCTCAAAGGTCCCGATCAGAACGCCTGGTCGCAGAAAGCCAGAGGCTTGTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338694.7
ENST00000573966.1
ENST00000575592.1
CDS CCA 72 bp TACGCAAGCTCGGGATGGGAGCCTCCTTACCCCAACTaGAGCTTCCAGCTCTTGCAGAACAGAGAGGTAAAC +
Preference number: 6 (lower is better)
Translates to: YASSGWEPPYPN*SFQLLQNREVN
Trigger: GTTTACCTCTCTGTTCTGCAAGAGCTGGAAGCTCCAGTTGGGGTAAGGAGGCTCCCATCCCGAGCTTGCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573966.1
ENST00000575592.1
CDS CCA 72 bp ACCCGCGAGGAGGAAGACGGCAAGGCCCACTCACTTTaGCTCAATCCTCACGGCGTTCTCAGAATATCTGAT +
Preference number: 6 (lower is better)
Translates to: TREEEDGKAHSL*LNPHGVLRISD
Trigger: ATCAGATATTCTGAGAACGCCGTGAGGATTGAGCCAAAGTGAGTGGGCCTTGCCGTCTTCCTCCTCGCGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573966.1
CDS TCA 72 bp TGGCTTTCTGCGACCAGGCGTTCTGATCGGGACCTTTaGGCGTCTGCTCTGTGGTACTGGTTCTTGTTAGCA +
Preference number: 6 (lower is better)
Translates to: WLSATRRSDRDL*ASALWYWFLLA
Trigger: TGCTAACAAGAACCAGTACCACAGAGCAGACGCTCAAAGGTCCCGATCAGAACGCCTGGTCGCAGAAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338694.7
ENST00000573966.1
ENST00000575592.1
CDS TCA 72 bp CAATGCGCTTCTCCCTGTATGCCAGGCATGTCTCAGTaGTGTGCAAGGGCTCTTTCAAGGTCTCCAGGGCTT +
Preference number: 6 (lower is better)
Translates to: QCASPCMPGMSQ*CARALSRSPGL
Trigger: AAGCCCTGGAGACCTTGAAAGAGCCCTTGCACATCACTGAGACATGCCTGGCATACAGGGAGAAGCGCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS TCA 72 bp GCAAGCTGTCTGCGATGCAGCCCTTTCAGCTCTGCCTaGGCTTGGGCTAAAGTTTCCTTCAATCTTGGCCAG +
Preference number: 6 (lower is better)
Translates to: ASCLRCSPFSSA*AWAKVSFNLGQ
Trigger: CTGGCCAAGATTGAAGGAAACTTTAGCCCAAGCTCAGGCAGAGCTGAAAGGGCTGCATCGCAGACAGCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572291.1
CDS GCA 72 bp GCGTCTGCTCTGTGGTACTGGTTCTTGTTAGCAATGTaGCACTCTGAGGGCAGGAACTTGGGTGGAGGTTGT +
Preference number: 6 (lower is better)
Translates to: ASALWYWFLLAM*HSEGRNLGGGC
Trigger: ACAACCTCCACCCAAGTTCCTGCCCTCAGAGTGGCACATTGCTAACAAGAACCAGTACCACAGAGCAGACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338694.7
ENST00000573966.1
ENST00000575592.1
CDS GCA 72 bp CGCTTCTCCCTGTATGCCAGGCATGTCTCAGTGATGTaGAAGGGCTCTTTCAAGGTCTCCAGGGCTTTTTCC +
Preference number: 6 (lower is better)
Translates to: RFSLYARHVSVM*KGSFKVSRAFS
Trigger: GGAAAAAGCCCTGGAGACCTTGAAAGAGCCCTTGCACATCACTGAGACATGCCTGGCATACAGGGAGAAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS GCA 72 bp TCAGCCTCCTTTATCAGCTCATGCTCCACTGTGTCGTaGACCAGGTCAATGCCAATGCGCTTCTCCCTGTAT +
Preference number: 6 (lower is better)
Translates to: SASFISSCSTVS*TRSMPMRFSLY
Trigger: ATACAGGGAGAAGCGCATTGGCATTGACCTGGTGCACGACACAGTGGAGCATGAGCTGATAAAGGAGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS GCA 72 bp TCAGCCTCCTTTATCAGCTCATGCTCCACTGTGTCGTaGACCAGGTCAATGCCAATGCGCTTCTCCCTAGTT +
Preference number: 6 (lower is better)
Translates to: SASFISSCSTVS*TRSMPMRFSLV
Trigger: AACTAGGGAGAAGCGCATTGGCATTGACCTGGTGCACGACACAGTGGAGCATGAGCTGATAAAGGAGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573966.1
ENST00000575592.1
CDS CAA 90 bp AGGTGTCTGGATGAGTACTGGCCTGCCATGAACTTGTCTTGTGCCTaGGGGCAAGAATTTAACCTCCTTGAGTTTCAGCTTCTCTTGGCC +
Preference number: 6 (lower is better)
Translates to: RCLDEYWPAMNLSCA*GQEFNLLEFQLLLA
Trigger: GGCCAAGAGAAGCTGAAACTCAAGGAGGTTAAATTCTTGCCCCAAGGCACAAGACAAGTTCATGGCAGGCCAGTACTCATCCAGACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS CAA 90 bp GCTTTTGGAGCCAGGTGTCTGGATGAGTACTGGCCTGCCATGAACTaGTCTTGTGCCTTGGGGCAAGAATTTAACCTCCTTGAGTTTCAG +
Preference number: 6 (lower is better)
Translates to: AFGARCLDEYWPAMN*SCALGQEFNLLEFQ
Trigger: CTGAAACTCAAGGAGGTTAAATTCTTGCCCCAAGGCACAAGACAAGTTCATGGCAGGCCAGTACTCATCCAGACACCTGGCTCCAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS TCA 72 bp TTTAACCTCCTTGAGTTTCAGCTTCTCTTGGCCAGATaGTCAGCCAGCTTGTCCCTGGCATCCTTTGTATCC +
Preference number: 6 (lower is better)
Translates to: FNLLEFQLLLAR*SASLSLASFVS
Trigger: GGATACAAAGGATGCCAGGGACAAGCTGGCTGATCATCTGGCCAAGAGAAGCTGAAACTCAAGGAGGTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS CCA 72 bp TTTCTTGTGGTCTTTTCAATTTCATCCACAAGCCTCTaGCTTTCTGCGACCAGGCGTTCTGATCGGGACCTT +
Preference number: 6 (lower is better)
Translates to: FLVVFSISSTSL*LSATRRSDRDL
Trigger: AAGGTCCCGATCAGAACGCCTGGTCGCAGAAAGCCAGAGGCTTGTGGATGAAATTGAAAAGACCACAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338694.7
ENST00000573966.1
ENST00000575592.1
CDS CAA 72 bp ACTTGTCTTGTGCCTTGGGGCAAGAATTTAACCTCCTaGAGTTTCAGCTTCTCTTGGCCAGATGATCAGCCA +
Preference number: 6 (lower is better)
Translates to: TCLVPWGKNLTS*SFSFSWPDDQP
Trigger: TGGCTGATCATCTGGCCAAGAGAAGCTGAAACTCAAGGAGGTTAAATTCTTGCCCCAAGGCACAAGACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS CAA 72 bp GATGAGTACTGGCCTGCCATGAACTTGTCTTGTGCCTaGGGGCAAGAATTTAACCTCCTTGAGTTTCAGCTT +
Preference number: 6 (lower is better)
Translates to: DEYWPAMNLSCA*GQEFNLLEFQL
Trigger: AAGCTGAAACTCAAGGAGGTTAAATTCTTGCCCCAAGGCACAAGACAAGTTCATGGCAGGCCAGTACTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571744.1
CDS TCA 72 bp AGGAACTTGGGTGGAGGTTGTAATAGTTTAGCCATTTaGGGTTTCCAAATTCCTCAGCGCCACACAGAACCA +
Preference number: 6 (lower is better)
Translates to: RNLGGGCNSLAI*GFQIPQRHTEP
Trigger: TGGTTCTGTGTGGCGCTGAGGAATTTGGAAACCTCAAATGGCTAAACTATTACAACCTCCACCCAAGTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338694.7
ENST00000573966.1
ENST00000575592.1
CDS CAA 90 bp ATGCGCTTCTCCCTAGTTTCTTGTTCACATCGCTTTGAGATTTTCTaGTGGTCTTTTCAATTTCATCCACAAGCCTCTGGCTTTCTGCGA +
Preference number: 6 (lower is better)
Translates to: MRFSLVSCSHRFEIF*WSFQFHPQASGFLR
Trigger: TCGCAGAAAGCCAGAGGCTTGTGGATGAAATTGAAAAGACCACAAGAAAATCTCAAAGCGATGTGAACAAGAAACTAGGGAGAAGCGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573966.1
ENST00000575592.1
CDS CCA 72 bp TGCTCAAGTTTGTCATCTAACTCCTTCTTCCAGAACTaGACTTCCTCGAGTCTCTGTTCTAGTTTCTTGTTC +
Preference number: 6 (lower is better)
Translates to: CSSLSSNSFFQN*TSSSLCSSFLF
Trigger: GAACAAGAAACTAGAACAGAGACTCGAGGAAGTCCAGTTCTGGAAGAAGGAGTTAGATGACAAACTTGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS CAA 90 bp CGAGTCTCTGTTCTAGTTTCTTGTTCACATCGCTTTGAGATTTTCTaGTGGTCTTTTCAATTTCATCCACAAGCCTCTGGCTTTCTGCGA +
Preference number: 6 (lower is better)
Translates to: RVSVLVSCSHRFEIF*WSFQFHPQASGFLR
Trigger: TCGCAGAAAGCCAGAGGCTTGTGGATGAAATTGAAAAGACCACAAGAAAATCTCAAAGCGATGTGAACAAGAAACTAGAACAGAGACTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS CAA 72 bp TCCCTAGTTTCTTGTTCACATCGCTTTGAGATTTTCTaGTGGTCTTTTCAATTTCATCCACAAGCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: SLVSCSHRFEIF*WSFQFHPQASG
Trigger: GCCAGAGGCTTGTGGATGAAATTGAAAAGACCACAAGAAAATCTCAAAGCGATGTGAACAAGAAACTAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573966.1
ENST00000575592.1
CDS CAA 72 bp GTTCTAGTTTCTTGTTCACATCGCTTTGAGATTTTCTaGTGGTCTTTTCAATTTCATCCACAAGCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: VLVSCSHRFEIF*WSFQFHPQASG
Trigger: GCCAGAGGCTTGTGGATGAAATTGAAAAGACCACAAGAAAATCTCAAAGCGATGTGAACAAGAAACTAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338694.7
CDS GCA 72 bp TTATATATGAGTAGATCATCAGTTACATTCACAAGCTaGTCAAGTTTGTCATCTAACTCCTTCTTCCAGAAC +
Preference number: 6 (lower is better)
Translates to: LYMSRSSVTFTS*SSLSSNSFFQN
Trigger: GTTCTGGAAGAAGGAGTTAGATGACAAACTTGAGCAGCTTGTGAATGTAACTGATGATCTACTCATATATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338694.7