Pregenerated sensors for TEFM (Homo sapiens)
Ensembl gene IDs: ENSG00000172171Ensembl transcript IDs: ENST00000306049.9, ENST00000541382.2, ENST00000579183.1, ENST00000580840.1, ENST00000581216.6
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTAGTCCGGGAGTCACCAATCATCAGTTCAAAATGCTTCCCCACTaGATTTCGATTCATGCTCAGCACCTGATGCTGCCCATCCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: TSPGVTNHQFKMLPH*ISIHAQHLMLPILG Trigger: GCCCAGGATGGGCAGCATCAGGTGCTGAGCATGAATCGAAATGCAGTGGGGAAGCATTTTGAACTGATGATTGGTGACTCCCGGACTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| 3UTR GCA 90 bp | AAGAACACCCGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTaGTTCACTAGCTCTTTTCCACTAGTCCGGGAGTCACCAATCATC | + |
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Preference number: 1 (lower is better) Translates to: KNTRGSAFSIESKRN*FTSSFPLVRESPII Trigger: GATGATTGGTGACTCCCGGACTAGTGGAAAAGAGCTAGTGAAGCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCGGGTGTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| 3UTR-3UTR GCA 90 bp | GATGGGAAGAACACCCGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTGCAAAATGCTTCCCCACTaGATTTCGATTCATGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: DGKNTRGSAFSIESKRNCKMLPH*ISIHAQ Trigger: CTGAGCATGAATCGAAATGCAGTGGGGAAGCATTTT...GCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCGGGTGTTCTTCCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| 3UTR-3UTR GCA 90 bp | GATGGGAAGAACACCCGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTGCATCATCAGTTCAAAATaGTTCCCCACTGCATTTCGA | + |
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Preference number: 2 (lower is better) Translates to: DGKNTRGSAFSIESKRNCIISSK*FPTAFR Trigger: TCGAAATGCAGTGGGGAAGCATTTTGAACTGATGAT...GCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCGGGTGTTCTTCCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| 3UTR-3UTR GCA 90 bp | TGGGAAGAACACCCGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTGCTTAGTATCTGCCTTCGATaGATAAGGCATTTCTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: WEEHPRIRLQYRIEEKLLSICLR*IRHFLN Trigger: GTTCAAGAAATGCCTTATGCATCGAAGGCAGATACT...AAGCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCGGGTGTTCTTCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580840.1 |
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| 3UTR-3UTR GCA 90 bp | ACGGTTAGAATAACTAGCAAGAATCAATCACCTCTGCAACTGACTAATCACATCCTGCATTTCGATTCATaGTCAGCACCTGATGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: TVRITSKNQSPLQLTNHILHFDS*SAPDAA Trigger: GGCAGCATCAGGTGCTGAGCATGAATCGAAATGCAG...GATGTGATTAGTCAGTTGCAGAGGTGATTGATTCTTGCTAGTTATTCTAACCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580840.1 |
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| 3UTR-3UTR GCA 90 bp | CGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTGCTTCACTAGCTCTTTTAAAATGCTTCCCCACTaGATTTCGATTCATGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: RGSAFSIESKRNCFTSSFKMLPH*ISIHAQ Trigger: CTGAGCATGAATCGAAATGCAGTGGGGAAGCATTTT...AAAAGAGCTAGTGAAGCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| 3UTR-3UTR TCA 90 bp | AAGAACACCCGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTGCTTCACTAACAGAGATGAGTTCTaGATGGAAAGTCCTGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: KNTRGSAFSIESKRNCFTNRDEF*MESPVF Trigger: AAAAACAGGACTTTCCATTCAGAACTCATCTCTGTT...AGTGAAGCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCGGGTGTTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| 3UTR-3UTR TCA 90 bp | AAGAACACCCGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTGCTTCACTACAGCATGGCTTCCATaGTATGAAAATGTAACAGTA | + |
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Preference number: 2 (lower is better) Translates to: KNTRGSAFSIESKRNCFTTAWLP*YENVTV Trigger: TACTGTTACATTTTCATATCATGGAAGCCATGCTGT...AGTGAAGCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCGGGTGTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| 3UTR CAA 90 bp | ACAACAGCTAAGCTAAGCTGTTTAGTCCTCCTAAGTACCAGTTTCTaGATCTGTACAGTGGACTTCATAATTTCTAAAATATGTATTGGC | + |
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Preference number: 2 (lower is better) Translates to: TTAKLSCLVLLSTSF*ICTVDFIISKICIG Trigger: GCCAATACATATTTTAGAAATTATGAAGTCCACTGTACAGATCAAGAAACTGGTACTTAGGAGGACTAAACAGCTTAGCTTAGCTGTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580840.1 |
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| 3UTR-3UTR GCA 90 bp | TCTTTTCCAATAACATGGATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATAGATTTTCTCAGTATCTaGCTTCGATGCATAAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: SFPITWMFTTVGVTLELIDFLSI*LRCIRH Trigger: ATGCCTTATGCATCGAAGGCAGATACTGAGAAAATC...TATTAGCTCTAACGTAACACCAACTGTTGTGAACATCCATGTTATTGGAAAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580840.1 |
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| 3UTR GCA 72 bp | GGAGTCACCAATCATCAGTTCAAAATGCTTCCCCACTaGATTTCGATTCATGCTCAGCACCTGATGCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: GVTNHQFKMLPH*ISIHAQHLMLP Trigger: GGGCAGCATCAGGTGCTGAGCATGAATCGAAATGCAGTGGGGAAGCATTTTGAACTGATGATTGGTGACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| 3UTR GCA 72 bp | CCACTAGTCCGGGAGTCACCAATCATCAGTTCAAAATaGTTCCCCACTGCATTTCGATTCATGCTCAGCACC | + |
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Preference number: 3 (lower is better) Translates to: PLVRESPIISSK*FPTAFRFMLST Trigger: GGTGCTGAGCATGAATCGAAATGCAGTGGGGAAGCATTTTGAACTGATGATTGGTGACTCCCGGACTAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| 3UTR GCA 72 bp | CGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTaGTTCACTAGCTCTTTTCCACTAGTCCGGGAGTCA | + |
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Preference number: 3 (lower is better) Translates to: RGSAFSIESKRN*FTSSFPLVRES Trigger: TGACTCCCGGACTAGTGGAAAAGAGCTAGTGAAGCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| CDS-3UTR TCA 90 bp | GTCCGGGAGTCACCAATCATCAGTTCAAAATGCTTCCCCACTGCATTTCGATTCGGCCCAGTACAGGGATaGCCTCGACGGGGTCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: VRESPIISSKCFPTAFRFGPVQG*PRRGQK Trigger: TTTCTGACCCCGTCGAGGTCATCCCTGTACTGGGCC...GAATCGAAATGCAGTGGGGAAGCATTTTGAACTGATGATTGGTGACTCCCGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| CDS-3UTR TCA 90 bp | TCAGTTCAAAATGCTTCCCCACTGCATTTCGATTCATGCTCAGCACCTGATGCTGGCCCAGTACAGGGATaGCCTCGACGGGGTCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: SVQNASPLHFDSCSAPDAGPVQG*PRRGQK Trigger: TTTCTGACCCCGTCGAGGTCATCCCTGTACTGGGCC...AGCATCAGGTGCTGAGCATGAATCGAAATGCAGTGGGGAAGCATTTTGAACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| CDS-3UTR TCA 90 bp | ACTGATGATGAGTATATTCCTCTCATTAAACTCCAACGGTCACTTTGCTGCCAGACCTCTCTCCCGCCGTaGAGAGGACAGACCCGCTCA | + |
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Preference number: 4 (lower is better) Translates to: TDDEYIPLIKLQRSLCCQTSLPP*RGQTRS Trigger: TGAGCGGGTCTGTCCTCTTCACGGCGGGAGAGAGGT...CTGGCAGCAAAGTGACCGTTGGAGTTTAATGAGAGGAATATACTCATCATCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306049.9 |
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| CDS-3UTR GCA 90 bp | TCAGTTCAAAATGCTTCCCCACTGCATTTCGATTCATGCTCAGCACCTGATGCTCTCCAACGGTCACTTTaGTGCCAGTCCAGCACTGTC | + |
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Preference number: 4 (lower is better) Translates to: SVQNASPLHFDSCSAPDALQRSL*CQSSTV Trigger: GACAGTGCTGGACTGGCAGCAAAGTGACCGTTGGAG...AGCATCAGGTGCTGAGCATGAATCGAAATGCAGTGGGGAAGCATTTTGAACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| CDS-3UTR TCA 90 bp | GATGGGAAGAACACCCGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTGCCGCTCATCTCCAAGTTaGATCAGTAGGTCCAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: DGKNTRGSAFSIESKRNCRSSPS*ISRSSL Trigger: AAGACTGGACCTACTGATTCAACTTGGAGATGAGCG...GCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCGGGTGTTCTTCCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| CDS-3UTR TCA 90 bp | ACGGTTAGAATAACTAGCAAGAATCAATCACCTCTGCAACTGACTAATCACATCACCTCTCTCCCGCCGTaGAGAGGACAGACCCGCTCA | + |
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Preference number: 4 (lower is better) Translates to: TVRITSKNQSPLQLTNHITSLPP*RGQTRS Trigger: TGAGCGGGTCTGTCCTCTTCACGGCGGGAGAGAGGT...GATGTGATTAGTCAGTTGCAGAGGTGATTGATTCTTGCTAGTTATTCTAACCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580840.1 |
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| CDS-3UTR GCA 90 bp | ATGAGTATATTCCTCTCATTAAACTCCAACGGTCACTTTGCTGCCAGTCCAGCACTCCAACGGTCACTTTaGTGCCAGTCCAGCACTGTC | + |
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Preference number: 4 (lower is better) Translates to: MSIFLSLNSNGHFAASPALQRSL*CQSSTV Trigger: GACAGTGCTGGACTGGCAGCAAAGTGACCGTTGGAG...TGCTGGACTGGCAGCAAAGTGACCGTTGGAGTTTAATGAGAGGAATATACTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306049.9 |
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| CDS-3UTR GCA 90 bp | TGGGAAGAACACCCGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTGCTTCTGCATTTCGATTCATaGTCAGCACCTGATGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: WEEHPRIRLQYRIEEKLLLHFDS*SAPDAA Trigger: GGCAGCATCAGGTGCTGAGCATGAATCGAAATGCAG...AAGCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCGGGTGTTCTTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| CDS-3UTR TCA 90 bp | GTCCGGGAGTCACCAATCATCAGTTCAAAATGCTTCCCCACTGCATTTCGATTCAACTTACGATCAAGGTaGGCCCAGGCAATTCTTCGA | + |
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Preference number: 4 (lower is better) Translates to: VRESPIISSKCFPTAFRFNLRSR*AQAILR Trigger: TCGAAGAATTGCCTGGGCTCACCTTGATCGTAAGTT...GAATCGAAATGCAGTGGGGAAGCATTTTGAACTGATGATTGGTGACTCCCGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580840.1 |
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| CDS-3UTR GCA 90 bp | TGGGAAGAACACCCGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTGCTTGAAGAGCTTGTCAAGTaGATTTTCGGGCTCCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: WEEHPRIRLQYRIEEKLLEELVK*IFGLLC Trigger: GCAAAGGAGCCCGAAAATGCACTTGACAAGCTCTTC...AAGCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCGGGTGTTCTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| CDS-3UTR GCA 90 bp | TGGGAAGAACACCCGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTGCTTTGCAAGATGGAAGCCTaGTGTTCTGAAGAGAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: WEEHPRIRLQYRIEEKLLCKMEA*CSEEKS Trigger: GCTCTTCTCTTCAGAACAGCAGGCTTCCATCTTGCA...AAGCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCGGGTGTTCTTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| CDS-3UTR GCA 90 bp | CCACTAGTCCGGGAGTCACCAATCATCAGTTCAAAATGCTTCCCCACTGCATTTTGCAAGATGGAAGCCTaGTGTTCTGAAGAGAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: PLVRESPIISSKCFPTAFCKMEA*CSEEKS Trigger: GCTCTTCTCTTCAGAACAGCAGGCTTCCATCTTGCA...AAATGCAGTGGGGAAGCATTTTGAACTGATGATTGGTGACTCCCGGACTAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| CDS-3UTR GCA 90 bp | GTCCGGGAGTCACCAATCATCAGTTCAAAATGCTTCCCCACTGCATTTCGATTCGTAGGAATCTGGAGGTaGAACTGCCTTACCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: VRESPIISSKCFPTAFRFVGIWR*NCLTSS Trigger: AGAAGAGGTAAGGCAGTTGCACCTCCAGATTCCTAC...GAATCGAAATGCAGTGGGGAAGCATTTTGAACTGATGATTGGTGACTCCCGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580840.1 |
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| CDS-3UTR TCA 90 bp | GATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATAATTATACTTTAGCACGTACCTCTCTCCCGCCGTaGAGAGGACAGACCCGCTCA | + |
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Preference number: 4 (lower is better) Translates to: DVHNSWCYVRANNYTLARTSLPP*RGQTRS Trigger: TGAGCGGGTCTGTCCTCTTCACGGCGGGAGAGAGGT...ACGTGCTAAAGTATAATTATTAGCTCTAACGTAACACCAACTGTTGTGAACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
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| CDS-3UTR TCA 90 bp | TGGGAAGAACACCCGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTGCTTTTTCTATGTCTGGTTTaGGGAGCTTTCTCAGGAACC | + |
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Preference number: 4 (lower is better) Translates to: WEEHPRIRLQYRIEEKLLFLCLV*GAFSGT Trigger: GGTTCCTGAGAAAGCTCCTCAAACCAGACATAGAAA...AAGCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCGGGTGTTCTTCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| CDS-3UTR TCA 90 bp | GTCCGGGAGTCACCAATCATCAGTTCAAAATGCTTCCCCACTGCATTTCGATTCGTGAACTATTTTATCTaGTGGGAAGAACACCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: VRESPIISSKCFPTAFRFVNYFI*WEEHPR Trigger: CCTCGGGTGTTCTTCCCATCAGATAAAATAGTTCAC...GAATCGAAATGCAGTGGGGAAGCATTTTGAACTGATGATTGGTGACTCCCGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| CDS-3UTR TCA 90 bp | TCTTTTCCAATAACATGGATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATAGGCCCAGTACAGGGATaGCCTCGACGGGGTCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: SFPITWMFTTVGVTLELIGPVQG*PRRGQK Trigger: TTTCTGACCCCGTCGAGGTCATCCCTGTACTGGGCC...TATTAGCTCTAACGTAACACCAACTGTTGTGAACATCCATGTTATTGGAAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
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| CDS-3UTR TCA 90 bp | TCAGTTCAAAATGCTTCCCCACTGCATTTCGATTCATGCTCAGCACCTGATGCTAACTTACGATCAAGGTaGGCCCAGGCAATTCTTAAG | + |
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Preference number: 4 (lower is better) Translates to: SVQNASPLHFDSCSAPDANLRSR*AQAILK Trigger: CTTAAGAATTGCCTGGGCTCACCTTGATCGTAAGTT...AGCATCAGGTGCTGAGCATGAATCGAAATGCAGTGGGGAAGCATTTTGAACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306049.9 |
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| CDS-3UTR GCA 90 bp | ATGAGTATATTCCTCTCATTAAACTCCAACGGTCACTTTGCTGCCAGTCCAGCAGAAGAGCTTGTCAAGTaGATTTTCGGGCTCCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: MSIFLSLNSNGHFAASPAEELVK*IFGLLC Trigger: GCAAAGGAGCCCGAAAATGCACTTGACAAGCTCTTC...TGCTGGACTGGCAGCAAAGTGACCGTTGGAGTTTAATGAGAGGAATATACTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306049.9 |
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| CDS-3UTR GCA 90 bp | AAGAACACCCGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTGCTTCACTGCTGTATTCAACACATaGAAGATGGAAGCCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: KNTRGSAFSIESKRNCFTAVFNT*KMEACC Trigger: ACAGCAGGCTTCCATCTTGCATGTGTTGAATACAGC...AGTGAAGCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCGGGTGTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| CDS-3UTR GCA 90 bp | CTGATGATGAGTATATTCCTCTCATTAAACTCCAACGGTCACTTTGCTGCCAGTCTGCATTTCGATTCATaGTCAGCACCTGATGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: LMMSIFLSLNSNGHFAASLHFDS*SAPDAA Trigger: GGCAGCATCAGGTGCTGAGCATGAATCGAAATGCAG...ACTGGCAGCAAAGTGACCGTTGGAGTTTAATGAGAGGAATATACTCATCATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306049.9 |
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| CDS-3UTR GCA 90 bp | GTCCGGGAGTCACCAATCATCAGTTCAAAATGCTTCCCCACTGCATTTCGATTCAAAATGCTTCCCCACTaGATTTCGATTCATGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: VRESPIISSKCFPTAFRFKMLPH*ISIHAQ Trigger: CTGAGCATGAATCGAAATGCAGTGGGGAAGCATTTT...GAATCGAAATGCAGTGGGGAAGCATTTTGAACTGATGATTGGTGACTCCCGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| CDS-3UTR CCA 90 bp | GATGGGAAGAACACCCGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTGCTTCTCTTTCTATGTCTaGTTTGAGGAGCTTTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: DGKNTRGSAFSIESKRNCFSFYV*FEELSQ Trigger: CTGAGAAAGCTCCTCAAACCAGACATAGAAAGAGAA...GCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCGGGTGTTCTTCCCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| CDS-3UTR TCA 90 bp | CGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTGCTTCACTAGCTCTTTTTGTGCTCTACGATATTaGTGGACCTTCTTCCACGAA | + |
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Preference number: 4 (lower is better) Translates to: RGSAFSIESKRNCFTSSFCALRY*WTFFHE Trigger: TTCGTGGAAGAAGGTCCATCAATATCGTAGAGCACA...AAAAGAGCTAGTGAAGCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| CDS-3UTR TCA 90 bp | ATGAGTATATTCCTCTCATTAAACTCCAACGGTCACTTTGCTGCCAGTCCAGCATTTCTATGTCTGGTTTaGGGAGCTTTCTCAGGAACC | + |
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Preference number: 4 (lower is better) Translates to: MSIFLSLNSNGHFAASPAFLCLV*GAFSGT Trigger: GGTTCCTGAGAAAGCTCCTCAAACCAGACATAGAAA...TGCTGGACTGGCAGCAAAGTGACCGTTGGAGTTTAATGAGAGGAATATACTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306049.9 |
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| CDS-3UTR TCA 90 bp | CTAGTCCGGGAGTCACCAATCATCAGTTCAAAATGCTTCCCCACTGCATTTCGATGCTTTAGGCATCTTTaGAATGATCGAGGAAATCTC | + |
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Preference number: 4 (lower is better) Translates to: LVRESPIISSKCFPTAFRCFRHL*NDRGNL Trigger: GAGATTTCCTCGATCATTTCAAAGATGCCTAAAGCA...TCGAAATGCAGTGGGGAAGCATTTTGAACTGATGATTGGTGACTCCCGGACTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306049.9 |
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| CDS-3UTR TCA 90 bp | GATGGGAAGAACACCCGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTGCAACAGAGATGAGTTCTaGATGGAAAGTCCTGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: DGKNTRGSAFSIESKRNCNRDEF*MESPVF Trigger: AAAAACAGGACTTTCCATTCAGAACTCATCTCTGTT...GCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCGGGTGTTCTTCCCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| CDS-3UTR TCA 90 bp | TCAGTTCAAAATGCTTCCCCACTGCATTTCGATTCATGCTCAGCACCTGATGCTAATCACCTCTGCAACTaGCTAATCACATCAGATGCT | + |
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Preference number: 4 (lower is better) Translates to: SVQNASPLHFDSCSAPDANHLCN*LITSDA Trigger: AGCATCTGATGTGATTAGTCAGTTGCAGAGGTGATT...AGCATCAGGTGCTGAGCATGAATCGAAATGCAGTGGGGAAGCATTTTGAACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580840.1 |
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| CDS-3UTR GCA 90 bp | CGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTGCTTCACTAGCTCTTTTGCTGTATTCAACACATaGAAGATGGAAGCCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: RGSAFSIESKRNCFTSSFAVFNT*KMEACC Trigger: ACAGCAGGCTTCCATCTTGCATGTGTTGAATACAGC...AAAAGAGCTAGTGAAGCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| CDS-3UTR GCA 90 bp | TCAGTTCAAAATGCTTCCCCACTGCATTTCGATTCATGCTCAGCACCTGATGCTAAAATGCTTCCCCACTaGATTTCGATTCATGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: SVQNASPLHFDSCSAPDAKMLPH*ISIHAQ Trigger: CTGAGCATGAATCGAAATGCAGTGGGGAAGCATTTT...AGCATCAGGTGCTGAGCATGAATCGAAATGCAGTGGGGAAGCATTTTGAACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| CDS-3UTR GCA 90 bp | CCACTAGTCCGGGAGTCACCAATCATCAGTTCAAAATGCTTCCCCACTGCATTTGAATCGAAGAGAAACTaGTTCACTAGCTCTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLVRESPIISSKCFPTAFESKRN*FTSSFP Trigger: TGGAAAAGAGCTAGTGAAGCAGTTTCTCTTCGATTC...AAATGCAGTGGGGAAGCATTTTGAACTGATGATTGGTGACTCCCGGACTAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
||
| CDS-3UTR GCA 90 bp | CTAGTCCGGGAGTCACCAATCATCAGTTCAAAATGCTTCCCCACTGCATTTCGAAGTATCTGCCTTCGATaGATAAGGCATTTCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVRESPIISSKCFPTAFRSICLR*IRHFLN Trigger: GTTCAAGAAATGCCTTATGCATCGAAGGCAGATACT...TCGAAATGCAGTGGGGAAGCATTTTGAACTGATGATTGGTGACTCCCGGACTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580840.1 |
||
| CDS-3UTR CCA 90 bp | CGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTGCTTCACTAGCTCTTTTTCAACACATGCAAGATaGAAGCCTGCTGTTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RGSAFSIESKRNCFTSSFSTHAR*KPAVLK Trigger: CTTCAGAACAGCAGGCTTCCATCTTGCATGTGTTGA...AAAAGAGCTAGTGAAGCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
||
| CDS-3UTR TCA 90 bp | CCACTAGTCCGGGAGTCACCAATCATCAGTTCAAAATGCTTCCCCACTGCATTTACAGCATGGCTTCCATaGTATGAAAATGTAACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PLVRESPIISSKCFPTAFTAWLP*YENVTV Trigger: TACTGTTACATTTTCATATCATGGAAGCCATGCTGT...AAATGCAGTGGGGAAGCATTTTGAACTGATGATTGGTGACTCCCGGACTAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
||
| CDS-3UTR GCA 90 bp | GATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATAATTATACTTTAGCACGTCTCCAACGGTCACTTTaGTGCCAGTCCAGCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DVHNSWCYVRANNYTLARLQRSL*CQSSTV Trigger: GACAGTGCTGGACTGGCAGCAAAGTGACCGTTGGAG...ACGTGCTAAAGTATAATTATTAGCTCTAACGTAACACCAACTGTTGTGAACATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
||
| CDS-3UTR GCA 90 bp | TCAGTTCAAAATGCTTCCCCACTGCATTTCGATTCATGCTCAGCACCTGATGCTATCATCAGTTCAAAATaGTTCCCCACTGCATTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SVQNASPLHFDSCSAPDAIISSK*FPTAFR Trigger: TCGAAATGCAGTGGGGAAGCATTTTGAACTGATGAT...AGCATCAGGTGCTGAGCATGAATCGAAATGCAGTGGGGAAGCATTTTGAACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
||
| CDS-3UTR CCA 90 bp | AAGAACACCCGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTGCTTCACTTTCTCTTTCTATGTCTaGTTTGAGGAGCTTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KNTRGSAFSIESKRNCFTFSFYV*FEELSQ Trigger: CTGAGAAAGCTCCTCAAACCAGACATAGAAAGAGAA...AGTGAAGCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCGGGTGTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
||
| CDS-3UTR TCA 90 bp | TCAGTTCAAAATGCTTCCCCACTGCATTTCGATTCATGCTCAGCACCTGATGCTAACAGAGATGAGTTCTaGATGGAAAGTCCTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVQNASPLHFDSCSAPDANRDEF*MESPVF Trigger: AAAAACAGGACTTTCCATTCAGAACTCATCTCTGTT...AGCATCAGGTGCTGAGCATGAATCGAAATGCAGTGGGGAAGCATTTTGAACTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
||
| CDS-3UTR TCA 90 bp | TCAGTTCAAAATGCTTCCCCACTGCATTTCGATTCATGCTCAGCACCTGATGCTACAGCATGGCTTCCATaGTATGAAAATGTAACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SVQNASPLHFDSCSAPDATAWLP*YENVTV Trigger: TACTGTTACATTTTCATATCATGGAAGCCATGCTGT...AGCATCAGGTGCTGAGCATGAATCGAAATGCAGTGGGGAAGCATTTTGAACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
||
| CDS-3UTR GCA 90 bp | CGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTGCTTCACTAGCTCTTTTATCATCAGTTCAAAATaGTTCCCCACTGCATTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RGSAFSIESKRNCFTSSFIISSK*FPTAFR Trigger: TCGAAATGCAGTGGGGAAGCATTTTGAACTGATGAT...AAAAGAGCTAGTGAAGCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
||
| CDS-3UTR CCA 90 bp | CCACTAGTCCGGGAGTCACCAATCATCAGTTCAAAATGCTTCCCCACTGCATTTTCTTTGGACAAAGTATaGAGTTACAAACTTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PLVRESPIISSKCFPTAFSLDKV*SYKLEL Trigger: CAGTTCAAGTTTGTAACTCCATACTTTGTCCAAAGA...AAATGCAGTGGGGAAGCATTTTGAACTGATGATTGGTGACTCCCGGACTAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
||
| CDS-3UTR CCA 90 bp | CTAGTCCGGGAGTCACCAATCATCAGTTCAAAATGCTTCCCCACTGCATTTCGATCTTTTCCAATAACATaGATGTTCACAACAGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVRESPIISSKCFPTAFRSFPIT*MFTTVG Trigger: ACCAACTGTTGTGAACATCCATGTTATTGGAAAAGA...TCGAAATGCAGTGGGGAAGCATTTTGAACTGATGATTGGTGACTCCCGGACTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
||
| CDS-3UTR GCA 90 bp | GATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATAATTATACTTTAGCACGTCTGCATTTCGATTCATaGTCAGCACCTGATGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: DVHNSWCYVRANNYTLARLHFDS*SAPDAA Trigger: GGCAGCATCAGGTGCTGAGCATGAATCGAAATGCAG...ACGTGCTAAAGTATAATTATTAGCTCTAACGTAACACCAACTGTTGTGAACATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
||
| CDS-3UTR GCA 90 bp | ACTGATGATGAGTATATTCCTCTCATTAAACTCCAACGGTCACTTTGCTGCCAGGAATCGAAGAGAAACTaGTTCACTAGCTCTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TDDEYIPLIKLQRSLCCQESKRN*FTSSFP Trigger: TGGAAAAGAGCTAGTGAAGCAGTTTCTCTTCGATTC...CTGGCAGCAAAGTGACCGTTGGAGTTTAATGAGAGGAATATACTCATCATCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306049.9 |
||
| CDS-3UTR TCA 90 bp | TCTTTTCCAATAACATGGATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATACGCTCATCTCCAAGTTaGATCAGTAGGTCCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFPITWMFTTVGVTLELIRSSPS*ISRSSL Trigger: AAGACTGGACCTACTGATTCAACTTGGAGATGAGCG...TATTAGCTCTAACGTAACACCAACTGTTGTGAACATCCATGTTATTGGAAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
||
| CDS-3UTR TCA 90 bp | TCTTTTCCAATAACATGGATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATAAACTTACGATCAAGGTaGGCCCAGGCAATTCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SFPITWMFTTVGVTLELINLRSR*AQAILR Trigger: TCGAAGAATTGCCTGGGCTCACCTTGATCGTAAGTT...TATTAGCTCTAACGTAACACCAACTGTTGTGAACATCCATGTTATTGGAAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000580840.1 ENST00000581216.6 |
||
| CDS-3UTR GCA 90 bp | GATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATAATTATACTTTAGCACGTGAAGAGCTTGTCAAGTaGATTTTCGGGCTCCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: DVHNSWCYVRANNYTLAREELVK*IFGLLC Trigger: GCAAAGGAGCCCGAAAATGCACTTGACAAGCTCTTC...ACGTGCTAAAGTATAATTATTAGCTCTAACGTAACACCAACTGTTGTGAACATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
||
| CDS-3UTR TCA 90 bp | TCTTTTCCAATAACATGGATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATATGTGCTCTACGATATTaGTGGACCTTCTTCCACGAA | + |
|
Preference number: 4 (lower is better) Translates to: SFPITWMFTTVGVTLELICALRY*WTFFHE Trigger: TTCGTGGAAGAAGGTCCATCAATATCGTAGAGCACA...TATTAGCTCTAACGTAACACCAACTGTTGTGAACATCCATGTTATTGGAAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
||
| CDS-3UTR TCA 90 bp | GATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATAATTATACTTTAGCACGTTTTCTATGTCTGGTTTaGGGAGCTTTCTCAGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: DVHNSWCYVRANNYTLARFLCLV*GAFSGT Trigger: GGTTCCTGAGAAAGCTCCTCAAACCAGACATAGAAA...ACGTGCTAAAGTATAATTATTAGCTCTAACGTAACACCAACTGTTGTGAACATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
||
| CDS-3UTR TCA 90 bp | GATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATAATTATACTTTAGCACGTGTGAACTATTTTATCTaGTGGGAAGAACACCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DVHNSWCYVRANNYTLARVNYFI*WEEHPR Trigger: CCTCGGGTGTTCTTCCCATCAGATAAAATAGTTCAC...ACGTGCTAAAGTATAATTATTAGCTCTAACGTAACACCAACTGTTGTGAACATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
||
| CDS-3UTR TCA 90 bp | TCTTTTCCAATAACATGGATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATAGTGAACTATTTTATCTaGTGGGAAGAACACCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFPITWMFTTVGVTLELIVNYFI*WEEHPR Trigger: CCTCGGGTGTTCTTCCCATCAGATAAAATAGTTCAC...TATTAGCTCTAACGTAACACCAACTGTTGTGAACATCCATGTTATTGGAAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
||
| CDS-3UTR TCA 90 bp | GTCCTCCTAAGTACCAGTTTCTTGATCTGTACAGTGGACTTCATAATTTCTAAAGAAAAAGCCATTTTATaGGCAGTCTGGTTCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLLSTSFLICTVDFIISKEKAIL*AVWFWS Trigger: TGACCAGAACCAGACTGCTCATAAAATGGCTTTTTC...TTTAGAAATTATGAAGTCCACTGTACAGATCAAGAAACTGGTACTTAGGAGGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000580840.1 |
||
| CDS-3UTR GCA 90 bp | GATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATAATTATACTTTAGCACGTGCTGTATTCAACACATaGAAGATGGAAGCCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DVHNSWCYVRANNYTLARAVFNT*KMEACC Trigger: ACAGCAGGCTTCCATCTTGCATGTGTTGAATACAGC...ACGTGCTAAAGTATAATTATTAGCTCTAACGTAACACCAACTGTTGTGAACATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
||
| CDS-3UTR GCA 90 bp | GAGCATACGGTTAGAATAACTAGCAAGAATCAATCACCTCTGCAACTGACTAATCCAAAGTTTTCTCTGTaGTCTACGATATTGATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: EHTVRITSKNQSPLQLTNPKFSL*STILMD Trigger: GTCCATCAATATCGTAGAGCACAGAGAAAACTTTGG...ATTAGTCAGTTGCAGAGGTGATTGATTCTTGCTAGTTATTCTAACCGTATGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580840.1 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCCAATAACATGGATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATATCAACACATGCAAGATaGAAGCCTGCTGTTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFPITWMFTTVGVTLELISTHAR*KPAVLK Trigger: CTTCAGAACAGCAGGCTTCCATCTTGCATGTGTTGA...TATTAGCTCTAACGTAACACCAACTGTTGTGAACATCCATGTTATTGGAAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
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| CDS-3UTR TCA 90 bp | ACGGTTAGAATAACTAGCAAGAATCAATCACCTCTGCAACTGACTAATCACATCTGCTTTAGGCATCTTTaGAATGATCGAGGAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TVRITSKNQSPLQLTNHICFRHL*NDRGNL Trigger: AAGATTTCCTCGATCATTTCAAAGATGCCTAAAGCA...GATGTGATTAGTCAGTTGCAGAGGTGATTGATTCTTGCTAGTTATTCTAACCGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580840.1 |
||
| CDS-3UTR GCA 90 bp | GATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATAATTATACTTTAGCACGTAAAATGCTTCCCCACTaGATTTCGATTCATGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DVHNSWCYVRANNYTLARKMLPH*ISIHAQ Trigger: CTGAGCATGAATCGAAATGCAGTGGGGAAGCATTTT...ACGTGCTAAAGTATAATTATTAGCTCTAACGTAACACCAACTGTTGTGAACATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
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| CDS-3UTR TCA 90 bp | TCTTTTCCAATAACATGGATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATATGCTTTAGGCATCTTTaGAATGATCGAGGAAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SFPITWMFTTVGVTLELICFRHL*NDRGNL Trigger: GAGATTTCCTCGATCATTTCAAAGATGCCTAAAGCA...TATTAGCTCTAACGTAACACCAACTGTTGTGAACATCCATGTTATTGGAAAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000581216.6 |
||
| CDS-3UTR GCA 90 bp | TCTTTTCCAATAACATGGATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATACCAAAGTTTTCTCTGTaGTCTACGATATTGATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SFPITWMFTTVGVTLELIPKFSL*STILMD Trigger: GTCCATCAATATCGTAGAGCACAGAGAAAACTTTGG...TATTAGCTCTAACGTAACACCAACTGTTGTGAACATCCATGTTATTGGAAAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
||
| CDS-3UTR GCA 90 bp | GATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATAATTATACTTTAGCACGTCCAAAGTTTTCTCTGTaGTCTACGATATTGATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: DVHNSWCYVRANNYTLARPKFSL*STILMD Trigger: GTCCATCAATATCGTAGAGCACAGAGAAAACTTTGG...ACGTGCTAAAGTATAATTATTAGCTCTAACGTAACACCAACTGTTGTGAACATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
||
| CDS-3UTR GCA 90 bp | GATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATAATTATACTTTAGCACGTATCATCAGTTCAAAATaGTTCCCCACTGCATTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: DVHNSWCYVRANNYTLARIISSK*FPTAFR Trigger: TCGAAATGCAGTGGGGAAGCATTTTGAACTGATGAT...ACGTGCTAAAGTATAATTATTAGCTCTAACGTAACACCAACTGTTGTGAACATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
||
| CDS-3UTR GCA 90 bp | TCTTTTCCAATAACATGGATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATAGAATCGAAGAGAAACTaGTTCACTAGCTCTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFPITWMFTTVGVTLELIESKRN*FTSSFP Trigger: TGGAAAAGAGCTAGTGAAGCAGTTTCTCTTCGATTC...TATTAGCTCTAACGTAACACCAACTGTTGTGAACATCCATGTTATTGGAAAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCCAATAACATGGATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATATTCTCTTTCTATGTCTaGTTTGAGGAGCTTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFPITWMFTTVGVTLELIFSFYV*FEELSQ Trigger: CTGAGAAAGCTCCTCAAACCAGACATAGAAAGAGAA...TATTAGCTCTAACGTAACACCAACTGTTGTGAACATCCATGTTATTGGAAAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
||
| CDS-3UTR TCA 90 bp | TCTTTTCCAATAACATGGATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATAAACAGAGATGAGTTCTaGATGGAAAGTCCTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFPITWMFTTVGVTLELINRDEF*MESPVF Trigger: AAAAACAGGACTTTCCATTCAGAACTCATCTCTGTT...TATTAGCTCTAACGTAACACCAACTGTTGTGAACATCCATGTTATTGGAAAAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
||
| CDS-3UTR TCA 90 bp | GATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATAATTATACTTTAGCACGTACAGCATGGCTTCCATaGTATGAAAATGTAACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: DVHNSWCYVRANNYTLARTAWLP*YENVTV Trigger: TACTGTTACATTTTCATATCATGGAAGCCATGCTGT...ACGTGCTAAAGTATAATTATTAGCTCTAACGTAACACCAACTGTTGTGAACATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
||
| 3UTR CAA 72 bp | AAGCTAAGCTGTTTAGTCCTCCTAAGTACCAGTTTCTaGATCTGTACAGTGGACTTCATAATTTCTAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: KLSCLVLLSTSF*ICTVDFIISKI Trigger: TATTTTAGAAATTATGAAGTCCACTGTACAGATCAAGAAACTGGTACTTAGGAGGACTAAACAGCTTAGCTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580840.1 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCCAATAACATGGATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATATCTTTGGACAAAGTATaGAGTTACAAACTTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SFPITWMFTTVGVTLELISLDKV*SYKLEL Trigger: CAGTTCAAGTTTGTAACTCCATACTTTGTCCAAAGA...TATTAGCTCTAACGTAACACCAACTGTTGTGAACATCCATGTTATTGGAAAAGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
||
| CDS-3UTR CCA 90 bp | GATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATAATTATACTTTAGCACGTTCTTTGGACAAAGTATaGAGTTACAAACTTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: DVHNSWCYVRANNYTLARSLDKV*SYKLEL Trigger: CAGTTCAAGTTTGTAACTCCATACTTTGTCCAAAGA...ACGTGCTAAAGTATAATTATTAGCTCTAACGTAACACCAACTGTTGTGAACATC 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
||
| CDS-3UTR CCA 90 bp | GATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATAATTATACTTTAGCACGTTCTTTTCCAATAACATaGATGTTCACAACAGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DVHNSWCYVRANNYTLARSFPIT*MFTTVG Trigger: ACCAACTGTTGTGAACATCCATGTTATTGGAAAAGA...ACGTGCTAAAGTATAATTATTAGCTCTAACGTAACACCAACTGTTGTGAACATC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
||
| CDS-3UTR CAA 90 bp | AAGAACACCCGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTGCTTCACTACTCCAACGGTCACTTaGCTGCCAGTCCAGCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: KNTRGSAFSIESKRNCFTTPTVT*LPVQHC Trigger: ACAGTGCTGGACTGGCAGCAAAGTGACCGTTGGAGT...AGTGAAGCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCGGGTGTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
||
| CDS-3UTR CAA 90 bp | GATGGGAAGAACACCCGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTGCCTGTGCTCTACGATATaGATGGACCTTCTTCCACGA | + |
|
Preference number: 5 (lower is better) Translates to: DGKNTRGSAFSIESKRNCLCSTI*MDLLPR Trigger: TCGTGGAAGAAGGTCCATCAATATCGTAGAGCACAG...GCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCGGGTGTTCTTCCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
||
| CDS-3UTR CAA 90 bp | GATGGGAAGAACACCCGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTGCTTTCCCGTCCAGTCTTaGGACAAAGTATGGAGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: DGKNTRGSAFSIESKRNCFPVQS*DKVWSY Trigger: GTAACTCCATACTTTGTCCAAAGACTGGACGGGAAA...GCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCGGGTGTTCTTCCCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
||
| CDS TCA 90 bp | CGGTCACTTTGCTGCCAGTCCAGCACTGTCAACTTACGATCAAGGTaGGCCCAGGCAATTCTTCGAGTACCAAAAACGATAGATATGATA | + |
|
Preference number: 5 (lower is better) Translates to: RSLCCQSSTVNLRSR*AQAILRVPKTIDMI Trigger: TATCATATCTATCGTTTTTGGTACTCGAAGAATTGCCTGGGCTCACCTTGATCGTAAGTTGACAGTGCTGGACTGGCAGCAAAGTGACCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000580840.1 ENST00000581216.6 |
||
| CDS-3UTR CAA 90 bp | TCAGTTCAAAATGCTTCCCCACTGCATTTCGATTCATGCTCAGCACCTGATGCTCTGTGCTCTACGATATaGATGGACCTTCTTCCACGA | + |
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Preference number: 5 (lower is better) Translates to: SVQNASPLHFDSCSAPDALCSTI*MDLLPR Trigger: TCGTGGAAGAAGGTCCATCAATATCGTAGAGCACAG...AGCATCAGGTGCTGAGCATGAATCGAAATGCAGTGGGGAAGCATTTTGAACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| CDS-3UTR CAA 90 bp | TGGGAAGAACACCCGAGGATCCGCCTTCAGTATAGAATCGAAGAGAAACTGCTTTTTCCCGTCCAGTCTTaGGACAAAGTATGGAGTTAC | + |
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Preference number: 5 (lower is better) Translates to: WEEHPRIRLQYRIEEKLLFPVQS*DKVWSY Trigger: GTAACTCCATACTTTGTCCAAAGACTGGACGGGAAA...AAGCAGTTTCTCTTCGATTCTATACTGAAGGCGGATCCTCGGGTGTTCTTCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306049.9 ENST00000580840.1 |
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| CDS-3UTR CAA 90 bp | TCTTTTCCAATAACATGGATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATAACTCCAACGGTCACTTaGCTGCCAGTCCAGCACTGT | + |
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Preference number: 5 (lower is better) Translates to: SFPITWMFTTVGVTLELITPTVT*LPVQHC Trigger: ACAGTGCTGGACTGGCAGCAAAGTGACCGTTGGAGT...TATTAGCTCTAACGTAACACCAACTGTTGTGAACATCCATGTTATTGGAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
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| CDS TCA 90 bp | CTAAATTCTGAAATGGCCCAAAGTTTTCTCTGTGCTCTACGATATTaGTGGACCTTCTTCCACGAAGCAATCGGAAAGCTTCAAGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: LNSEMAQSFLCALRY*WTFFHEAIGKLQVL Trigger: AAGAACTTGAAGCTTTCCGATTGCTTCGTGGAAGAAGGTCCATCAATATCGTAGAGCACAGAGAAAACTTTGGGCCATTTCAGAATTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000306049.9 ENST00000541382.2 ENST00000580840.1 ENST00000581216.6 |
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| CDS-3UTR CAA 90 bp | GATGTTCACAACAGTTGGTGTTACGTTAGAGCTAATAATTATACTTTAGCACGTCTGTGCTCTACGATATaGATGGACCTTCTTCCACGA | + |
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Preference number: 5 (lower is better) Translates to: DVHNSWCYVRANNYTLARLCSTI*MDLLPR Trigger: TCGTGGAAGAAGGTCCATCAATATCGTAGAGCACAG...ACGTGCTAAAGTATAATTATTAGCTCTAACGTAACACCAACTGTTGTGAACATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
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| CDS TCA 90 bp | CTTTTATACTTAAACAAGGGCACATTCATTAAACTCTCTAAATTCTaGAATGGCCCAAAGTTTTCTCTGTGCTCTACGATATTGATGGAC | + |
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Preference number: 5 (lower is better) Translates to: LLYLNKGTFIKLSKF*NGPKFSLCSTILMD Trigger: GTCCATCAATATCGTAGAGCACAGAGAAAACTTTGGGCCATTTCAGAATTTAGAGAGTTTAATGAATGTGCCCTTGTTTAAGTATAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000306049.9 ENST00000541382.2 ENST00000580840.1 ENST00000581216.6 |
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| CDS TCA 72 bp | TGCTGCCAGTCCAGCACTGTCAACTTACGATCAAGGTaGGCCCAGGCAATTCTTCGAGTACCAAAAACGATA | + |
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Preference number: 6 (lower is better) Translates to: CCQSSTVNLRSR*AQAILRVPKTI Trigger: TATCGTTTTTGGTACTCGAAGAATTGCCTGGGCTCACCTTGATCGTAAGTTGACAGTGCTGGACTGGCAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000580840.1 ENST00000581216.6 |
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| CDS TCA 72 bp | TGCTGCCAGTCCAGCACTGTCAACTTACGATCAAGGTaGGCCCAGGCAATTCTTAAGTCTTTCTCTTTCTAT | + |
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Preference number: 6 (lower is better) Translates to: CCQSSTVNLRSR*AQAILKSFSFY Trigger: ATAGAAAGAGAAAGACTTAAGAATTGCCTGGGCTCACCTTGATCGTAAGTTGACAGTGCTGGACTGGCAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306049.9 |
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| CDS GCA 72 bp | GAGTATATTCCTCTCATTAAACTCCAACGGTCACTTTaGTGCCAGTCCAGCACTGTCAACTTACGATCAAGG | + |
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Preference number: 6 (lower is better) Translates to: EYIPLIKLQRSL*CQSSTVNLRSR Trigger: CCTTGATCGTAAGTTGACAGTGCTGGACTGGCAGCAAAGTGACCGTTGGAGTTTAATGAGAGGAATATACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306049.9 ENST00000580840.1 ENST00000581216.6 |
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| CDS CAA 72 bp | TGCAAGATGGAAGCCTGCTGTTCTGAAGAGAAGAGCTaGTCAAGTGCATTTTCGGGCTCCTTTGCATTTTCA | + |
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Preference number: 6 (lower is better) Translates to: CKMEACCSEEKS*SSAFSGSFAFS Trigger: TGAAAATGCAAAGGAGCCCGAAAATGCACTTGACAAGCTCTTCTCTTCAGAACAGCAGGCTTCCATCTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000306049.9 ENST00000541382.2 ENST00000580840.1 ENST00000581216.6 |
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| CDS GCA 72 bp | ACGAAGCAATCGGAAAGCTTCAAGTTCTTTAGTAGATaGTGTATTCAACACATGCAAGATGGAAGCCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: TKQSESFKFFSR*CIQHMQDGSLL Trigger: CAGCAGGCTTCCATCTTGCATGTGTTGAATACAGCATCTACTAAAGAACTTGAAGCTTTCCGATTGCTTCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000306049.9 ENST00000541382.2 ENST00000580840.1 ENST00000581216.6 |
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| CDS CAA 90 bp | TTCAACACATGCAAGATGGAAGCCTGCTGTTCTGAAGAGAAGAGCTaGTCAAGTGCATTTTCGGGCTCCTTTGCATTTTCATCACAAAAA | + |
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Preference number: 6 (lower is better) Translates to: FNTCKMEACCSEEKS*SSAFSGSFAFSSQK Trigger: TTTTTGTGATGAAAATGCAAAGGAGCCCGAAAATGCACTTGACAAGCTCTTCTCTTCAGAACAGCAGGCTTCCATCTTGCATGTGTTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000306049.9 ENST00000541382.2 ENST00000580840.1 ENST00000581216.6 |
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| CDS CAA 72 bp | GTAGCTGGCAGGCATGCACCAATGATATTTAATACTTaGACATCAAAGAGACTTAGGTTCATAAAGAAGATA | + |
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Preference number: 6 (lower is better) Translates to: VAGRHAPMIFNT*TSKRLRFIKKI Trigger: TATCTTCTTTATGAACCTAAGTCTCTTTGATGTCAAAGTATTAAATATCATTGGTGCATGCCTGCCAGCTAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579183.1 |
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