Pregenerated sensors for TECRL (Homo sapiens)
Ensembl gene IDs: ENSG00000205678Ensembl transcript IDs: ENST00000381210.8, ENST00000507440.5, ENST00000509536.1, ENST00000511356.1, ENST00000513125.5
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAAATGTTCTCCAGTTAATATGGCTTATAATAGCATCAAATGCATaGCTTTCACAGACGGCAAAACTTCTTGGCCAAACCCTGTATTGC | + |
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Preference number: 1 (lower is better) Translates to: RNVLQLIWLIIASNA*LSQTAKLLGQTLYC Trigger: GCAATACAGGGTTTGGCCAAGAAGTTTTGCCGTCTGTGAAAGGCATGCATTTGATGCTATTATAAGCCATATTAACTGGAGAACATTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507440.5 |
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| 3UTR-3UTR TCA 90 bp | GAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTTTACATTCCCACCAGCAGCAGATCTCAAACTTCTaGACTCAAGCAATTCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: ESPCCSPHGCSSLHSHQQQISNF*TQAIPL Trigger: CAGGGGAATTGCTTGAGTTCAGAAGTTTGAGATCTG...CTGCTGGTGGGAATGTAAACTAGAGCAGCCATGTGGAGAACAACATGGACTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| 3UTR-3UTR GCA 90 bp | GAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTTTACATTCCCACCAGCAGCAAGGACCAATCCCATaGAAATACATTCAGAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: ESPCCSPHGCSSLHSHQQQGPIP*KYIQSC Trigger: ACAGCTCTGAATGTATTTGCATGGGATTGGTCCTTG...CTGCTGGTGGGAATGTAAACTAGAGCAGCCATGTGGAGAACAACATGGACTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGAATGTGCCCAAATTACCAATGTACTTTTGCTTTGCAAGTGCATACAATCCCTCAAGCAATTCCCCTaGCTTGGCCTGTCAAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: SECAQITNVLLLCKCIQSLKQFP*LGLSKC Trigger: ACACTTTGACAGGCCAAGGCAGGGGAATTGCTTGAG...GGATTGTATGCACTTGCAAAGCAAAAGTACATTGGTAATTTGGGCACATTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| 3UTR-3UTR GCA 90 bp | CTATTTGTAATTTTTGAAGAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTCTACCTACTGGCATGTaGCACCACGCCCAGCTAATT | + |
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Preference number: 2 (lower is better) Translates to: LFVIFEESPCCSPHGCSSLPTGM*HHAQLI Trigger: AATTAGCTGGGCGTGGTGGCACATGCCAGTAGGTAG...ACTAGAGCAGCCATGTGGAGAACAACATGGACTTTCTTCAAAAATTACAAATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| 3UTR-3UTR GCA 90 bp | CTATTTGTAATTTTTGAAGAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTTCACCCAGGCTGGAGTaGCTTGGTTTAATCATGGCT | + |
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Preference number: 2 (lower is better) Translates to: LFVIFEESPCCSPHGCSSSPRLE*LGLIMA Trigger: AGCCATGATTAAACCAAGGCACTCCAGCCTGGGTGA...ACTAGAGCAGCCATGTGGAGAACAACATGGACTTTCTTCAAAAATTACAAATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGAATGTGCCCAAATTACCAATGTACTTTTGCTTTGCAAGTGCATACAATCCAGAGTCTCAATATGTTaGCCAGATCTCAAACTTCTG | + |
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Preference number: 2 (lower is better) Translates to: SECAQITNVLLLCKCIQSRVSIC*PDLKLL Trigger: CAGAAGTTTGAGATCTGGGCAACATATTGAGACTCT...GGATTGTATGCACTTGCAAAGCAAAAGTACATTGGTAATTTGGGCACATTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGAATGTGCCCAAATTACCAATGTACTTTTGCTTTGCAAGTGCATACAATCCAGCAATTCCCCTGCCTaGGCCTGTCAAAGTGTTAGG | + |
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Preference number: 3 (lower is better) Translates to: SECAQITNVLLLCKCIQSSNSPA*ACQSVR Trigger: CCTAACACTTTGACAGGCCAAGGCAGGGGAATTGCT...GGATTGTATGCACTTGCAAAGCAAAAGTACATTGGTAATTTGGGCACATTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| 3UTR GCA 72 bp | ATTTTTGAAGAAAGTCCATGTTGTTCTCCACATGGCTaGTCTAGTTTACATTCCCACCAGCAGTGTCTAAGA | + |
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Preference number: 3 (lower is better) Translates to: IFEESPCCSPHG*SSLHSHQQCLR Trigger: TCTTAGACACTGCTGGTGGGAATGTAAACTAGAGCAGCCATGTGGAGAACAACATGGACTTTCTTCAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| 3UTR GCA 72 bp | CTCCAGTTAATATGGCTTATAATAGCATCAAATGCATaGCTTTCACAGACGGCAAAACTTCTTGGCCAAACC | + |
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Preference number: 3 (lower is better) Translates to: LQLIWLIIASNA*LSQTAKLLGQT Trigger: GGTTTGGCCAAGAAGTTTTGCCGTCTGTGAAAGGCATGCATTTGATGCTATTATAAGCCATATTAACTGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507440.5 |
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| 3UTR TCA 72 bp | CTTAACATATGCCCTCCAATTCCATCCATGTTGTCCTaGATGACAGGAATTCAGTTTTTATGGCTGCATAGT | + |
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Preference number: 3 (lower is better) Translates to: LNICPPIPSMLS*MTGIQFLWLHS Trigger: ACTATGCAGCCATAAAAACTGAATTCCTGTCATTCAGGACAACATGGATGGAATTGGAGGGCATATGTTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| 3UTR GCA 72 bp | TGTTCTCCAGTTAATATGGCTTATAATAGCATCAAATaGATGCCTTTCACAGACGGCAAAACTTCTTGGCCA | + |
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Preference number: 3 (lower is better) Translates to: CSPVNMAYNSIK*MPFTDGKTSWP Trigger: TGGCCAAGAAGTTTTGCCGTCTGTGAAAGGCATGCATTTGATGCTATTATAAGCCATATTAACTGGAGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507440.5 |
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| 3UTR-3UTR CAA 90 bp | CTATTTGTAATTTTTGAAGAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTTCAGTGTATATACTGTaGCTCATGAATTGTTGGAGT | + |
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Preference number: 3 (lower is better) Translates to: LFVIFEESPCCSPHGCSSSVYIL*LMNCWS Trigger: ACTCCAACAATTCATGAGCAACAGTATATACACTGA...ACTAGAGCAGCCATGTGGAGAACAACATGGACTTTCTTCAAAAATTACAAATAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| 3UTR CCA 72 bp | TGGAATATAATGTTCTTAACTATAGTCGTCCTACAGTaGTATAGAACACCAGAAATTATTCCTCCTACCAAG | + |
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Preference number: 3 (lower is better) Translates to: WNIMFLTIVVLQ*YRTPEIIPPTK Trigger: CTTGGTAGGAGGAATAATTTCTGGTGTTCTATACCACTGTAGGACGACTATAGTTAAGAACATTATATTCCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| 3UTR GCA 72 bp | TATGTAAATGTAATTGAGACACTTACAACTAATCTATaGAGTGTTGAATGCTGCTCCTGCAAAATACTCCAT | + |
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Preference number: 3 (lower is better) Translates to: YVNVIETLTTNL*SVECCSCKILH Trigger: ATGGAGTATTTTGCAGGAGCAGCATTCAACACTGCATAGATTAGTTGTAAGTGTCTCAATTACATTTACATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507440.5 |
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| 3UTR CCA 72 bp | ATAAGTAATAACATGCAATGTTTAACTTTCTGTTCCTaGCTTGTTTCACTTAACATATGCCCTCCAATTCCA | + |
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Preference number: 3 (lower is better) Translates to: ISNNMQCLTFCS*LVSLNICPPIP Trigger: TGGAATTGGAGGGCATATGTTAAGTGAAACAAGCCAGGAACAGAAAGTTAAACATTGCATGTTATTACTTAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR TCA 90 bp | GAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTTTACATTCCCACCAGCAGGTCCAACTGACTTGTTaGCCTAGGTCTGTAGCATAC | + |
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Preference number: 4 (lower is better) Translates to: ESPCCSPHGCSSLHSHQQVQLTC*PRSVAY Trigger: GTATGCTACAGACCTAGGTCAACAAGTCAGTTGGAC...CTGCTGGTGGGAATGTAAACTAGAGCAGCCATGTGGAGAACAACATGGACTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR GCA 90 bp | TCTGAATGTGCCCAAATTACCAATGTACTTTTGCTTTGCAAGTGCATACAATCCCCGCCACATTCTAGCTaGAGACCAACTCGAGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: SECAQITNVLLLCKCIQSPPHSS*RPTREG Trigger: CCCTTCTCGAGTTGGTCTGCAGCTAGAATGTGGCGG...GGATTGTATGCACTTGCAAAGCAAAAGTACATTGGTAATTTGGGCACATTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR GCA 90 bp | GAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTTTACATTCCCACCAGCAGAGAGTCTCAATATGTTaGCCAGATCTCAAACTTCTG | + |
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Preference number: 4 (lower is better) Translates to: ESPCCSPHGCSSLHSHQQRVSIC*PDLKLL Trigger: CAGAAGTTTGAGATCTGGGCAACATATTGAGACTCT...CTGCTGGTGGGAATGTAAACTAGAGCAGCCATGTGGAGAACAACATGGACTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR GCA 90 bp | TCTGAATGTGCCCAAATTACCAATGTACTTTTGCTTTGCAAGTGCATACAATCCTCTCTAGTCTCCCTTTaGTGCAGCTTTCCCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SECAQITNVLLLCKCIQSSLVSL*CSFPSL Trigger: CAGGCTGGGAAAGCTGCAGCAAAGGGAGACTAGAGA...GGATTGTATGCACTTGCAAAGCAAAAGTACATTGGTAATTTGGGCACATTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR TCA 90 bp | GAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTTTACATTCCCACCAGCAGTGTGAAACTAATCCATaGTCCAATCTCATAGGTGTA | + |
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Preference number: 4 (lower is better) Translates to: ESPCCSPHGCSSLHSHQQCETNP*SNLIGV Trigger: TACACCTATGAGATTGGATCATGGATTAGTTTCACA...CTGCTGGTGGGAATGTAAACTAGAGCAGCCATGTGGAGAACAACATGGACTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR GCA 90 bp | GAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTTTACATTCCCACCAGCAGGACAATGGAGGAAGCTaGAATACTTTGAATGGTAAT | + |
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Preference number: 4 (lower is better) Translates to: ESPCCSPHGCSSLHSHQQDNGGS*NTLNGN Trigger: ATTACCATTCAAAGTATTGCAGCTTCCTCCATTGTC...CTGCTGGTGGGAATGTAAACTAGAGCAGCCATGTGGAGAACAACATGGACTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR CCA 90 bp | GAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTTTACATTCCCACCAGCAGTGTAAAAATTCCAACTaGCAGTGTTTGTGTCATGAC | + |
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Preference number: 4 (lower is better) Translates to: ESPCCSPHGCSSLHSHQQCKNSN*QCLCHD Trigger: GTCATGACACAAACACTGCCAGTTGGAATTTTTACA...CTGCTGGTGGGAATGTAAACTAGAGCAGCCATGTGGAGAACAACATGGACTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR TCA 90 bp | CTATTTGTAATTTTTGAAGAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTACACTGTGGTCCAACTaGCTTGTTGACCTAGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: LFVIFEESPCCSPHGCSSTLWSN*LVDLGL Trigger: CAGACCTAGGTCAACAAGTCAGTTGGACCACAGTGT...ACTAGAGCAGCCATGTGGAGAACAACATGGACTTTCTTCAAAAATTACAAATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR GCA 90 bp | TCTGAATGTGCCCAAATTACCAATGTACTTTTGCTTTGCAAGTGCATACAATCCAAAGTAATGCTCTCTTaGGTTCCGAAGCGAGGGACT | + |
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Preference number: 4 (lower is better) Translates to: SECAQITNVLLLCKCIQSKVMLS*VPKRGT Trigger: AGTCCCTCGCTTCGGAACGCAAGAGAGCATTACTTT...GGATTGTATGCACTTGCAAAGCAAAAGTACATTGGTAATTTGGGCACATTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR GCA 90 bp | CTATTTGTAATTTTTGAAGAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTCTCAAGCAATTCCCCTaGCTTGGCCTGTCAAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: LFVIFEESPCCSPHGCSSLKQFP*LGLSKC Trigger: ACACTTTGACAGGCCAAGGCAGGGGAATTGCTTGAG...ACTAGAGCAGCCATGTGGAGAACAACATGGACTTTCTTCAAAAATTACAAATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR GCA 90 bp | AGACAATTTTATTCAAGGACCAATCCCATGCAAATACATTCAGAGCTGTTCTTACTACCTACTGGCATGTaGCACCACGCCCAGCTAATT | + |
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Preference number: 4 (lower is better) Translates to: RQFYSRTNPMQIHSELFLLPTGM*HHAQLI Trigger: AATTAGCTGGGCGTGGTGGCACATGCCAGTAGGTAG...TAAGAACAGCTCTGAATGTATTTGCATGGGATTGGTCCTTGAATAAAATTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR GCA 90 bp | AGACAATTTTATTCAAGGACCAATCCCATGCAAATACATTCAGAGCTGTTCTTATCACCCAGGCTGGAGTaGCTTGGTTTAATCATGGCT | + |
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Preference number: 4 (lower is better) Translates to: RQFYSRTNPMQIHSELFLSPRLE*LGLIMA Trigger: AGCCATGATTAAACCAAGGCACTCCAGCCTGGGTGA...TAAGAACAGCTCTGAATGTATTTGCATGGGATTGGTCCTTGAATAAAATTGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR CCA 90 bp | TCTGAATGTGCCCAAATTACCAATGTACTTTTGCTTTGCAAGTGCATACAATCCCCATTCATCTGTTGTTaGACACCTAGGTTGCTCCTA | + |
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Preference number: 4 (lower is better) Translates to: SECAQITNVLLLCKCIQSPFICC*TPRLLL Trigger: TAGGAGCAACCTAGGTGTCCAACAACAGATGAATGG...GGATTGTATGCACTTGCAAAGCAAAAGTACATTGGTAATTTGGGCACATTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR TCA 90 bp | TCTGAATGTGCCCAAATTACCAATGTACTTTTGCTTTGCAAGTGCATACAATCCGGGACTTGTGCCTTTTaGACATTGTGTGAACTAAGA | + |
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Preference number: 4 (lower is better) Translates to: SECAQITNVLLLCKCIQSGTCAF*TLCELR Trigger: TCTTAGTTCACACAATGTTCAAAAGGCACAAGTCCC...GGATTGTATGCACTTGCAAAGCAAAAGTACATTGGTAATTTGGGCACATTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR CCA 90 bp | TCTGAATGTGCCCAAATTACCAATGTACTTTTGCTTTGCAAGTGCATACAATCCAACCGTGTAGCTCTTTaGGAAAGTAATGCTCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: SECAQITNVLLLCKCIQSNRVAL*ESNALL Trigger: CAAGAGAGCATTACTTTCCCAAAGAGCTACACGGTT...GGATTGTATGCACTTGCAAAGCAAAAGTACATTGGTAATTTGGGCACATTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR CCA 90 bp | TCTGAATGTGCCCAAATTACCAATGTACTTTTGCTTTGCAAGTGCATACAATCCGCCCACAAAGACATCTaGATACTCATCAGAAGTGTA | + |
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Preference number: 4 (lower is better) Translates to: SECAQITNVLLLCKCIQSAHKDI*ILIRSV Trigger: TACACTTCTGATGAGTATCCAGATGTCTTTGTGGGC...GGATTGTATGCACTTGCAAAGCAAAAGTACATTGGTAATTTGGGCACATTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR TCA 90 bp | CTATTTGTAATTTTTGAAGAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTGGTGTAGTTAGGACATaGAACCAGGAAAAACATCCA | + |
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Preference number: 4 (lower is better) Translates to: LFVIFEESPCCSPHGCSSGVVRT*NQEKHP Trigger: TGGATGTTTTTCCTGGTTTCATGTCCTAACTACACC...ACTAGAGCAGCCATGTGGAGAACAACATGGACTTTCTTCAAAAATTACAAATAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR GCA 90 bp | CTATTTGTAATTTTTGAAGAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTCAAGGACCAATCCCATaGAAATACATTCAGAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LFVIFEESPCCSPHGCSSQGPIP*KYIQSC Trigger: ACAGCTCTGAATGTATTTGCATGGGATTGGTCCTTG...ACTAGAGCAGCCATGTGGAGAACAACATGGACTTTCTTCAAAAATTACAAATAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR TCA 90 bp | CTATTTGTAATTTTTGAAGAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTGGAAAAACATCCATGTaGAGGGGTTATAATTTGGAC | + |
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Preference number: 4 (lower is better) Translates to: LFVIFEESPCCSPHGCSSGKTSM*RGYNLD Trigger: GTCCAAATTATAACCCCTTCACATGGATGTTTTTCC...ACTAGAGCAGCCATGTGGAGAACAACATGGACTTTCTTCAAAAATTACAAATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR TCA 90 bp | AGACAATTTTATTCAAGGACCAATCCCATGCAAATACATTCAGAGCTGTTCTTATTAGGATTACAGATATaGACCACCACGGCTGTCATA | + |
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Preference number: 4 (lower is better) Translates to: RQFYSRTNPMQIHSELFLLGLQI*TTTAVI Trigger: TATGACAGCCGTGGTGGTTCATATCTGTAATCCTAA...TAAGAACAGCTCTGAATGTATTTGCATGGGATTGGTCCTTGAATAAAATTGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR GCA 90 bp | CTATTTGTAATTTTTGAAGAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTCAAAGGTGTGTGTCCTaGAGAAACTTTGTGAACAAA | + |
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Preference number: 4 (lower is better) Translates to: LFVIFEESPCCSPHGCSSQRCVS*RNFVNK Trigger: TTTGTTCACAAAGTTTCTGCAGGACACACACCTTTG...ACTAGAGCAGCCATGTGGAGAACAACATGGACTTTCTTCAAAAATTACAAATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR GCA 90 bp | CTATTTGTAATTTTTGAAGAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTGCAGATACTGTGATTTaGCTGTTTCCAAATGATGGT | + |
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Preference number: 4 (lower is better) Translates to: LFVIFEESPCCSPHGCSSADTVI*LFPNDG Trigger: ACCATCATTTGGAAACAGGCAAATCACAGTATCTGC...ACTAGAGCAGCCATGTGGAGAACAACATGGACTTTCTTCAAAAATTACAAATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR GCA 90 bp | TCTGAATGTGCCCAAATTACCAATGTACTTTTGCTTTGCAAGTGCATACAATCCCTTATGTTTCTTTTGTaGCCACAAAGACATCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: SECAQITNVLLLCKCIQSLMFLL*PQRHLD Trigger: ATCCAGATGTCTTTGTGGGCACAAAAGAAACATAAG...GGATTGTATGCACTTGCAAAGCAAAAGTACATTGGTAATTTGGGCACATTCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR CCA 90 bp | CTATTTGTAATTTTTGAAGAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTAGAAGGGTACCACTTTaGACATGCTTTGTGAAACTT | + |
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Preference number: 4 (lower is better) Translates to: LFVIFEESPCCSPHGCSSRRVPL*TCFVKL Trigger: AAGTTTCACAAAGCATGTCCAAAGTGGTACCCTTCT...ACTAGAGCAGCCATGTGGAGAACAACATGGACTTTCTTCAAAAATTACAAATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR CCA 90 bp | CTATTTGTAATTTTTGAAGAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTGAAGGGGTTATAATTTaGACTTGGGAAACAGGCATT | + |
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Preference number: 4 (lower is better) Translates to: LFVIFEESPCCSPHGCSSEGVII*TWETGI Trigger: AATGCCTGTTTCCCAAGTCCAAATTATAACCCCTTC...ACTAGAGCAGCCATGTGGAGAACAACATGGACTTTCTTCAAAAATTACAAATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR CCA 90 bp | TCTGAATGTGCCCAAATTACCAATGTACTTTTGCTTTGCAAGTGCATACAATCCGTATATGTCTTCCTTTaGGAAATGTCTGTTCAGATC | + |
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Preference number: 4 (lower is better) Translates to: SECAQITNVLLLCKCIQSVYVFL*EMSVQI Trigger: GATCTGAACAGACATTTCCCAAAGGAAGACATATAC...GGATTGTATGCACTTGCAAAGCAAAAGTACATTGGTAATTTGGGCACATTCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| 3UTR CAA 72 bp | AACACCAGAAATTATTCCTCCTACCAAGCTGTAACTTaGTATCCTTTAACAAATCTCTCTCTAGTCTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: NTRNYSSYQAVT*YPLTNLSLVSL Trigger: AAGGGAGACTAGAGAGAGATTTGTTAAAGGATACAAAGTTACAGCTTGGTAGGAGGAATAATTTCTGGTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR TCA 90 bp | AGACAATTTTATTCAAGGACCAATCCCATGCAAATACATTCAGAGCTGTTCTTAAAAGTGAGTCGTTTTTaGATGTTTGACTGCTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: RQFYSRTNPMQIHSELFLKVSRF*MFDCWS Trigger: ACTCCAGCAGTCAAACATTCAAAAACGACTCACTTT...TAAGAACAGCTCTGAATGTATTTGCATGGGATTGGTCCTTGAATAAAATTGTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR TCA 90 bp | CTATTTGTAATTTTTGAAGAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTATCATGAATAGTAGATaGTTGTGTCACCTTATCCAG | + |
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Preference number: 4 (lower is better) Translates to: LFVIFEESPCCSPHGCSSIMNSR*LCHLIQ Trigger: CTGGATAAGGTGACACAATCATCTACTATTCATGAT...ACTAGAGCAGCCATGTGGAGAACAACATGGACTTTCTTCAAAAATTACAAATAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR TCA 90 bp | CTATTTGTAATTTTTGAAGAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTCCTGCAGAAACTTTGTaGACAAATAAGGTTTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: LFVIFEESPCCSPHGCSSPAETL*TNKVSK Trigger: TTTGGAAACCTTATTTGTTCACAAAGTTTCTGCAGG...ACTAGAGCAGCCATGTGGAGAACAACATGGACTTTCTTCAAAAATTACAAATAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR TCA 90 bp | CTATTTGTAATTTTTGAAGAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTGAGCGACATAAGAATTaGACATATTTGGGAGATACA | + |
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Preference number: 4 (lower is better) Translates to: LFVIFEESPCCSPHGCSSERHKN*TYLGDT Trigger: TGTATCTCCCAAATATGTTCAATTCTTATGTCGCTC...ACTAGAGCAGCCATGTGGAGAACAACATGGACTTTCTTCAAAAATTACAAATAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR GCA 90 bp | AGACAATTTTATTCAAGGACCAATCCCATGCAAATACATTCAGAGCTGTTCTTAGCATCAGTTAAATACTaGTGGAGAACCTTTGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: RQFYSRTNPMQIHSELFLASVKY*WRTFER Trigger: CCTTTCAAAGGTTCTCCAGCAGTATTTAACTGATGC...TAAGAACAGCTCTGAATGTATTTGCATGGGATTGGTCCTTGAATAAAATTGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR CCA 90 bp | CTATTTGTAATTTTTGAAGAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTTGTTTCCTGTGTGATTaGGATGAGACAACATTACAT | + |
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Preference number: 4 (lower is better) Translates to: LFVIFEESPCCSPHGCSSCFLCD*DETTLH Trigger: ATGTAATGTTGTCTCATCCCAATCACACAGGAAACA...ACTAGAGCAGCCATGTGGAGAACAACATGGACTTTCTTCAAAAATTACAAATAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR CCA 90 bp | CTATTTGTAATTTTTGAAGAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTGTTATAATTTGGACTTaGGAAACAGGCATTGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LFVIFEESPCCSPHGCSSVIIWT*ETGIVS Trigger: GGAAACAATGCCTGTTTCCCAAGTCCAAATTATAAC...ACTAGAGCAGCCATGTGGAGAACAACATGGACTTTCTTCAAAAATTACAAATAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR GCA 90 bp | AGACAATTTTATTCAAGGACCAATCCCATGCAAATACATTCAGAGCTGTTCTTAGTACCACTTTGGACATaGTTTGTGAAACTTTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: RQFYSRTNPMQIHSELFLVPLWT*FVKLLL Trigger: AAGCAAAAGTTTCACAAAGCATGTCCAAAGTGGTAC...TAAGAACAGCTCTGAATGTATTTGCATGGGATTGGTCCTTGAATAAAATTGTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| 3UTR CAA 72 bp | CATGGCTGCTACAGGATTATACCTGTAGCATTAATATaGACAACAAGATGGTGTAAATTTGTCAGGCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: HGCYRIIPVALI*TTRWCKFVRLF Trigger: AAAAAGCCTGACAAATTTACACCATCTTGTTGTCAATATTAATGCTACAGGTATAATCCTGTAGCAGCCATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507440.5 |
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| CDS-3UTR CAA 90 bp | GAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTTTACATTCCCACCAGCAGGAGAAGGGTACCACTTaGGACATGCTTTGTGAAACT | + |
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Preference number: 5 (lower is better) Translates to: ESPCCSPHGCSSLHSHQQEKGTT*DMLCET Trigger: AGTTTCACAAAGCATGTCCAAAGTGGTACCCTTCTC...CTGCTGGTGGGAATGTAAACTAGAGCAGCCATGTGGAGAACAACATGGACTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS TCA 90 bp | AAAGTAATGCTCTCTTGCGTTCCGAAGCGAGGGACTTGTGCCTTTTaGACATTGTGTGAACTAAGAGGAGGGTCTGTCATGTCAAAAGTA | + |
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Preference number: 5 (lower is better) Translates to: KVMLSCVPKRGTCAF*TLCELRGGSVMSKV Trigger: TACTTTTGACATGACAGACCCTCCTCTTAGTTCACACAATGTTCAAAAGGCACAAGTCCCTCGCTTCGGAACGCAAGAGAGCATTACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000381210.8 ENST00000507440.5 ENST00000509536.1 ENST00000511356.1 |
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| CDS-3UTR CAA 90 bp | GAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTTTACATTCCCACCAGCAGTGTATATGTCTTCCTTaGGGAAATGTCTGTTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: ESPCCSPHGCSSLHSHQQCICLP*GNVCSD Trigger: ATCTGAACAGACATTTCCCAAAGGAAGACATATACA...CTGCTGGTGGGAATGTAAACTAGAGCAGCCATGTGGAGAACAACATGGACTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR CAA 90 bp | CTATTTGTAATTTTTGAAGAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTAGCAATTCCCCTGCCTaGGCCTGTCAAAGTGTTAGG | + |
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Preference number: 5 (lower is better) Translates to: LFVIFEESPCCSPHGCSSSNSPA*ACQSVR Trigger: CCTAACACTTTGACAGGCCAAGGCAGGGGAATTGCT...ACTAGAGCAGCCATGTGGAGAACAACATGGACTTTCTTCAAAAATTACAAATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR CAA 90 bp | AGACAATTTTATTCAAGGACCAATCCCATGCAAATACATTCAGAGCTGTTCTTACTCTCTAGTCTCCCTTaGCTGCAGCTTTCCCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: RQFYSRTNPMQIHSELFLLSSLP*LQLSQP Trigger: AGGCTGGGAAAGCTGCAGCAAAGGGAGACTAGAGAG...TAAGAACAGCTCTGAATGTATTTGCATGGGATTGGTCCTTGAATAAAATTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS TCA 90 bp | GAGCATCAAATATTTCAATCTCAAAGTGAGTCGTTTTTGAATGTTTaGCTGCTGGAGTTGGTCTTAGAGGGCCCGCTGAGAGTACAAGTT | + |
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Preference number: 5 (lower is better) Translates to: EHQIFQSQSESFLNV*LLELVLEGPLRVQV Trigger: AACTTGTACTCTCAGCGGGCCCTCTAAGACCAACTCCAGCAGTCAAACATTCAAAAACGACTCACTTTGAGATTGAAATATTTGATGCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000381210.8 ENST00000507440.5 ENST00000509536.1 ENST00000511356.1 |
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| CDS-3UTR CAA 90 bp | AGACAATTTTATTCAAGGACCAATCCCATGCAAATACATTCAGAGCTGTTCTTAGAAAGTAATGCTCTCTaGCGTTCCGAAGCGAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: RQFYSRTNPMQIHSELFLESNAL*RSEARD Trigger: GTCCCTCGCTTCGGAACGCAAGAGAGCATTACTTTC...TAAGAACAGCTCTGAATGTATTTGCATGGGATTGGTCCTTGAATAAAATTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR CAA 90 bp | AGACAATTTTATTCAAGGACCAATCCCATGCAAATACATTCAGAGCTGTTCTTATCCGAAGCGAGGGACTaGTGCCTTTTGAACATTGTG | + |
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Preference number: 5 (lower is better) Translates to: RQFYSRTNPMQIHSELFLSEARD*CLLNIV Trigger: CACAATGTTCAAAAGGCACAAGTCCCTCGCTTCGGA...TAAGAACAGCTCTGAATGTATTTGCATGGGATTGGTCCTTGAATAAAATTGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR CAA 90 bp | TCTGAATGTGCCCAAATTACCAATGTACTTTTGCTTTGCAAGTGCATACAATCCTGTTGGACACCTAGGTaGCTCCTATATCTTGGCTAT | + |
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Preference number: 5 (lower is better) Translates to: SECAQITNVLLLCKCIQSCWTPR*LLYLGY Trigger: ATAGCCAAGATATAGGAGCAACCTAGGTGTCCAACA...GGATTGTATGCACTTGCAAAGCAAAAGTACATTGGTAATTTGGGCACATTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR CAA 90 bp | TCTGAATGTGCCCAAATTACCAATGTACTTTTGCTTTGCAAGTGCATACAATCCGGTTATAATTTGGACTaGGGAAACAGGCATTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: SECAQITNVLLLCKCIQSGYNLD*GNRHCF Trigger: GAAACAATGCCTGTTTCCCAAGTCCAAATTATAACC...GGATTGTATGCACTTGCAAAGCAAAAGTACATTGGTAATTTGGGCACATTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR CAA 90 bp | AGACAATTTTATTCAAGGACCAATCCCATGCAAATACATTCAGAGCTGTTCTTATCCAACTGGCAGTGTTaGTGTCATGACTGTGAAACT | + |
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Preference number: 5 (lower is better) Translates to: RQFYSRTNPMQIHSELFLSNWQC*CHDCET Trigger: AGTTTCACAGTCATGACACAAACACTGCCAGTTGGA...TAAGAACAGCTCTGAATGTATTTGCATGGGATTGGTCCTTGAATAAAATTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR CAA 90 bp | CTATTTGTAATTTTTGAAGAAAGTCCATGTTGTTCTCCACATGGCTGCTCTAGTCTTTCTGTTCCTGGCTaGTTTCACTTAACATATGCC | + |
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Preference number: 5 (lower is better) Translates to: LFVIFEESPCCSPHGCSSLSVPG*FHLTYA Trigger: GGCATATGTTAAGTGAAACAAGCCAGGAACAGAAAG...ACTAGAGCAGCCATGTGGAGAACAACATGGACTTTCTTCAAAAATTACAAATAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR CAA 90 bp | AGACAATTTTATTCAAGGACCAATCCCATGCAAATACATTCAGAGCTGTTCTTAGGTTGCTCCTATATCTaGGCTATTGTGAATAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: RQFYSRTNPMQIHSELFLGCSYI*AIVNSA Trigger: AGCACTATTCACAATAGCCAAGATATAGGAGCAACC...TAAGAACAGCTCTGAATGTATTTGCATGGGATTGGTCCTTGAATAAAATTGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS CCA 90 bp | CTTCCACATATAAGTAATAACATGCAATGTTTAACTTTCTGTTCCTaGCTTGTTTCACTTAACATATGCCCTCCAATTCCATCCATGTTG | + |
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Preference number: 5 (lower is better) Translates to: LPHISNNMQCLTFCS*LVSLNICPPIPSML Trigger: CAACATGGATGGAATTGGAGGGCATATGTTAAGTGAAACAAGCCAGGAACAGAAAGTTAAACATTGCATGTTATTACTTATATGTGGAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR CAA 90 bp | AGACAATTTTATTCAAGGACCAATCCCATGCAAATACATTCAGAGCTGTTCTTAGCAAGTGTGTTCCTTTaGCATCAGTTAAATACTGCT | + |
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Preference number: 5 (lower is better) Translates to: RQFYSRTNPMQIHSELFLASVFL*HQLNTA Trigger: AGCAGTATTTAACTGATGCAAAAGGAACACACTTGC...TAAGAACAGCTCTGAATGTATTTGCATGGGATTGGTCCTTGAATAAAATTGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR CAA 90 bp | AGACAATTTTATTCAAGGACCAATCCCATGCAAATACATTCAGAGCTGTTCTTAGGAAGCTGCAATACTTaGAATGGTAATGTAGTCCTT | + |
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Preference number: 5 (lower is better) Translates to: RQFYSRTNPMQIHSELFLGSCNT*NGNVVL Trigger: AAGGACTACATTACCATTCAAAGTATTGCAGCTTCC...TAAGAACAGCTCTGAATGTATTTGCATGGGATTGGTCCTTGAATAAAATTGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS-3UTR CAA 90 bp | AGACAATTTTATTCAAGGACCAATCCCATGCAAATACATTCAGAGCTGTTCTTAAATCTTATGTTTCTTTaGTGCCCACAAAGACATCTG | + |
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Preference number: 5 (lower is better) Translates to: RQFYSRTNPMQIHSELFLNLMFL*CPQRHL Trigger: CAGATGTCTTTGTGGGCACAAAAGAAACATAAGATT...TAAGAACAGCTCTGAATGTATTTGCATGGGATTGGTCCTTGAATAAAATTGTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381210.8 |
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| CDS TCA 72 bp | CTCTCTTGCGTTCCGAAGCGAGGGACTTGTGCCTTTTaGACATTGTGTGAACTAAGAGGAGGGTCTGTCATG | + |
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Preference number: 6 (lower is better) Translates to: LSCVPKRGTCAF*TLCELRGGSVM Trigger: CATGACAGACCCTCCTCTTAGTTCACACAATGTTCAAAAGGCACAAGTCCCTCGCTTCGGAACGCAAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000381210.8 ENST00000507440.5 ENST00000509536.1 ENST00000511356.1 |
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| CDS CAA 72 bp | ATGAACCGTGTAGCTCTTTGGGAAAGTAATGCTCTCTaGCGTTCCGAAGCGAGGGACTTGTGCCTTTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: MNRVALWESNAL*RSEARDLCLLN Trigger: GTTCAAAAGGCACAAGTCCCTCGCTTCGGAACGCAAGAGAGCATTACTTTCCCAAAGAGCTACACGGTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000381210.8 ENST00000507440.5 ENST00000509536.1 ENST00000511356.1 |
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| CDS CCA 72 bp | CTCATATCATCCTTCAGTATGAACCGTGTAGCTCTTTaGGAAAGTAATGCTCTCTTGCGTTCCGAAGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: LISSFSMNRVAL*ESNALLRSEAR Trigger: CCTCGCTTCGGAACGCAAGAGAGCATTACTTTCCCAAAGAGCTACACGGTTCATACTGAAGGATGATATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000381210.8 ENST00000507440.5 ENST00000509536.1 ENST00000511356.1 |
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| CDS TCA 72 bp | TATTCAGCCAAAAACACTGTGGTCCAACTGACTTGTTaGCCTAGGTCTGTAGCATACAGTGTGACAATGGAG | + |
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Preference number: 6 (lower is better) Translates to: YSAKNTVVQLTC*PRSVAYSVTME Trigger: CTCCATTGTCACACTGTATGCTACAGACCTAGGTCAACAAGTCAGTTGGACCACAGTGTTTTTGGCTGAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000381210.8 ENST00000507440.5 ENST00000511356.1 |
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| CDS CCA 72 bp | GCAAGAGAGGGTCATGTGAGAGCTCCTTACAAAGTGTaGCAGGTGATTTATGACCAGAAAATTGATAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: AREGHVRAPYKV*QVIYDQKIDSR Trigger: TCTGCTATCAATTTTCTGGTCATAAATCACCTGCCACACTTTGTAAGGAGCTCTCACATGACCCTCTCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513125.5 |
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| CDS CCA 72 bp | TGCAAGTGTGTTCCTTTTGCATCAGTTAAATACTGCTaGAGAACCTTTGAAAGGTCAAATGGTATGCCATTC | + |
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Preference number: 6 (lower is better) Translates to: CKCVPFASVKYC*RTFERSNGMPF Trigger: GAATGGCATACCATTTGACCTTTCAAAGGTTCTCCAGCAGTATTTAACTGATGCAAAAGGAACACACTTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507440.5 |
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| CDS GCA 72 bp | AATTGCAAGTGTGTTCCTTTTGCATCAGTTAAATACTaGTGGAGAACCTTTGAAAGGTCAAATGGTATGCCA | + |
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Preference number: 6 (lower is better) Translates to: NCKCVPFASVKY*WRTFERSNGMP Trigger: TGGCATACCATTTGACCTTTCAAAGGTTCTCCAGCAGTATTTAACTGATGCAAAAGGAACACACTTGCAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507440.5 |
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