RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TECPR2 (Homo sapiens)

Ensembl gene IDs: ENSG00000196663

Ensembl transcript IDs: ENST00000359520.12, ENST00000557786.1, ENST00000558678.1, ENST00000559124.1, ENST00000560060.5, ENST00000561099.1, ENST00000561228.1

Found 842 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGCAGAAGGCATGGGCTGCCACTCGGAGCCAGCCCGCAGGTCCCGTaGCCGCCCTGCCAGTCAAGTCTGTGCGGGGATGCCTGCCCCTCT +
Preference number: 1 (lower is better)
Translates to: RRRHGLPLGASPQVP*PPCQSSLCGDACPS
Trigger: AGAGGGGCAGGCATCCCCGCACAGACTTGACTGGCAGGGCGGTCACGGGACCTGCGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 90 bp GTGACCGCCCTGCCAGTCAAGTCTGTGCGGGGATGCCTGCCCCTCTaGGGCTGCAGGCGAGGACAGTGCAGGCTCAGGACAAACCCGGGA +
Preference number: 1 (lower is better)
Translates to: VTALPVKSVRGCLPL*GCRRGQCRLRTNPG
Trigger: TCCCGGGTTTGTCCTGAGCCTGCACTGTCCTCGCCTGCAGCCTCAGAGGGGCAGGCATCCCCGCACAGACTTGACTGGCAGGGCGGTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 90 bp CGCCCCCGCCGCTCCTTAAGCGCATCTGAGATGCCCTCTCCATTCTaGTCCCTCCCTGTGGGCCTTGCTAGCCTGTTGCCTGGCCCTCCG +
Preference number: 1 (lower is better)
Translates to: RPRRSLSASEMPSPF*SLPVGLASLLPGPP
Trigger: CGGAGGGCCAGGCAACAGGCTAGCAAGGCCCACAGGGAGGGAGCAGAATGGAGAGGGCATCTCAGATGCGCTTAAGGAGCGGCGGGGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 90 bp ACGTGGGTAATCGGAGTGCATGCAGCCGGGCAGTCGCCACTGTCCTaGGCTAGGAGGCGCCACTGCTGCAGCAATCACGCCAGCCACGGG +
Preference number: 1 (lower is better)
Translates to: TWVIGVHAAGQSPLS*ARRRHCCSNHASHG
Trigger: CCCGTGGCTGGCGTGATTGCTGCAGCAGTGGCGCCTCCTAGCTCAGGACAGTGGCGACTGCCCGGCTGCATGCACTCCGATTACCCACGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 90 bp AGTGTGCTCTCCAGGAGGCGGGCAGCCTGCGCCGTGTGTGGGCAGTaGGGTGTGGTGTGGTGTGGTGTGGTGAGATGTGGCGAGGTACGG +
Preference number: 1 (lower is better)
Translates to: SVLSRRRAACAVCGQ*GVVWCGVVRCGEVR
Trigger: CCGTACCTCGCCACATCTCACCACACCACACCACACCACACCTCACTGCCCACACACGGCGCAGGCTGCCCGCCTCCTGGAGAGCACACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 90 bp CTCCCTGTGGGCCTTGCTAGCCTGTTGCCTGGCCCTCCGAGGGTCTaGGCCATGCCATTCAATAGAGTGGCCCCTGCTGGGGCTCCACCT +
Preference number: 1 (lower is better)
Translates to: LPVGLASLLPGPPRV*AMPFNRVAPAGAPP
Trigger: AGGTGGAGCCCCAGCAGGGGCCACTCTATTGAATGGCATGGCCCAGACCCTCGGAGGGCCAGGCAACAGGCTAGCAAGGCCCACAGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 90 bp TTCAACCTGTCAAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTaGCACTCGGAGCCAGCCCGCAGGTCCCGTGACCGCCCTGCCAGT +
Preference number: 1 (lower is better)
Translates to: FNLSSVNPYPAEGMG*HSEPARRSRDRPAS
Trigger: ACTGGCAGGGCGGTCACGGGACCTGCGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTTGACAGGTTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 90 bp CAGCTGAAGTGTGCTCTCCAGGAGGCGGGCAGCCTGCGCCGTGTGTaGGCAGTGAGGTGTGGTGTGGTGTGGTGTGGTGAGATGTGGCGA +
Preference number: 1 (lower is better)
Translates to: QLKCALQEAGSLRRV*AVRCGVVWCGEMWR
Trigger: TCGCCACATCTCACCACACCACACCACACCACACCTCACTGCCCACACACGGCGCAGGCTGCCCGCCTCCTGGAGAGCACACTTCAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 90 bp CTGGTTTCAACCTGTCAAGTGTCAACCCATACCCCGCAGAAGGCATaGGCTGCCACTCGGAGCCAGCCCGCAGGTCCCGTGACCGCCCTG +
Preference number: 1 (lower is better)
Translates to: LVSTCQVSTHTPQKA*AATRSQPAGPVTAL
Trigger: CAGGGCGGTCACGGGACCTGCGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTTGACAGGTTGAAACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 90 bp CTGTGGTGGGGCTGGGCTGGCAGGTTCTCCCTTGCACTGCCCTCGTaGGTGTCGGCTGAGGACACTTCTCACAGCTCAGGCACCACACTC +
Preference number: 1 (lower is better)
Translates to: LWWGWAGRFSLALPS*VSAEDTSHSSGTTL
Trigger: GAGTGTGGTGCCTGAGCTGTGAGAAGTGTCCTCAGCCGACACTCACGAGGGCAGTGCAAGGGAGAACCTGCCAGCCCAGCCCCACCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 90 bp TGGGCCTTGCTAGCCTGTTGCCTGGCCCTCCGAGGGTCTGGGCCATaGCATTCAATAGAGTGGCCCCTGCTGGGGCTCCACCTGTCATCA +
Preference number: 1 (lower is better)
Translates to: WALLACCLALRGSGP*HSIEWPLLGLHLSS
Trigger: TGATGACAGGTGGAGCCCCAGCAGGGGCCACTCTATTGAATGGCATGGCCCAGACCCTCGGAGGGCCAGGCAACAGGCTAGCAAGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 90 bp GAAGGAGGCCCTGGGCCAAACCAGCTGCCCGGCTACCCTTGGTTCTaGGAGGCCTCCGGAGACCACTCCCACCAACAAAAGCTGGAGCTA +
Preference number: 1 (lower is better)
Translates to: EGGPGPNQLPGYPWF*EASGDHSHQQKLEL
Trigger: TAGCTCCAGCTTTTGTTGGTGGGAGTGGTCTCCGGAGGCCTCCCAGAACCAAGGGTAGCCGGGCAGCTGGTTTGGCCCAGGGCCTCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 90 bp CTCAGCTCCCCCACGCCCCATGCACCCTCCTGTGCCGTCCCTACCTaGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGG +
Preference number: 1 (lower is better)
Translates to: LSSPTPHAPSCAVPT*DTRAHIQVPFAPIR
Trigger: CCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGACGGCACAGGAGGGTGCATGGGGCGTGGGGGAGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 90 bp CTGGGCTGGCAGGTTCTCCCTTGCACTGCCCTCGTGAGTGTCGGCTaGGGACACTTCTCACAGCTCAGGCACCACACTCGGCCAGGTTTG +
Preference number: 1 (lower is better)
Translates to: LGWQVLPCTALVSVG*GHFSQLRHHTRPGL
Trigger: CAAACCTGGCCGAGTGTGGTGCCTGAGCTGTGAGAAGTGTCCTCAGCCGACACTCACGAGGGCAGTGCAAGGGAGAACCTGCCAGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 90 bp CAGAGAGCTGACCTTTGGCTCCATCTGGCCCTGGGGCTACTAATGTaGAAGGAGGCCCTGGGCCAAACCAGCTGCCCGGCTACCCTTGGT +
Preference number: 1 (lower is better)
Translates to: QRADLWLHLALGLLM*KEALGQTSCPATLG
Trigger: ACCAAGGGTAGCCGGGCAGCTGGTTTGGCCCAGGGCCTCCTTCCACATTAGTAGCCCCAGGGCCAGATGGAGCCAAAGGTCAGCTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 90 bp CCTGGCATGGCCAGCGCTCTCCTCTCAAGCCCGGCCTCAGCTTCCTaGCCAGAGCGTCTGGCATGGAATGTGCTCTGCAGCTTTGTCTCT +
Preference number: 1 (lower is better)
Translates to: PGMASALLSSPASAS*PERLAWNVLCSFVS
Trigger: AGAGACAAAGCTGCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGGCCGGGCTTGAGAGGAGAGCGCTGGCCATGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 90 bp CCCACAGCGTCCTCCTCAGAGGCTACCATGGGGTACAGCCAGCTCTaGAGCGGCCATTCCCCCATAACAGCCACTTGGGCAAACCGGTGT +
Preference number: 1 (lower is better)
Translates to: PTASSSEATMGYSQL*SGHSPITATWANRC
Trigger: ACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATGGCCGCTCCAGAGCTGGCTGTACCCCATGGTAGCCTCTGAGGAGGACGCTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 90 bp AAACCGGTGTGTATTTCAACACCAGCCAGGCCAGGACAGGTCTGCTaGCGCACTCTCCCTGTGGTGGGGCTGGGCTGGCAGGTTCTCCCT +
Preference number: 1 (lower is better)
Translates to: KPVCISTPARPGQVC*RTLPVVGLGWQVLP
Trigger: AGGGAGAACCTGCCAGCCCAGCCCCACCACAGGGAGAGTGCGTCAGCAGACCTGTCCTGGCCTGGCTGGTGTTGAAATACACACCGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 90 bp CAAAGCCATCACCGAGCACATCCCGCGCTGCAGAGAGCTGACCTTTaGCTCCATCTGGCCCTGGGGCTACTAATGTGGAAGGAGGCCCTG +
Preference number: 1 (lower is better)
Translates to: QSHHRAHPALQRADL*LHLALGLLMWKEAL
Trigger: CAGGGCCTCCTTCCACATTAGTAGCCCCAGGGCCAGATGGAGCCAAAGGTCAGCTCTCTGCAGCGCGGGATGTGCTCGGTGATGGCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 90 bp TTTCATGACCATGCCCGGGAACTTCACGCTGGCGCGGTGAGGTCCTaGGCCTCCGCTTCCTGCACACACGTGCTTCTTAATAGCTGCAGG +
Preference number: 1 (lower is better)
Translates to: FHDHARELHAGAVRS*ASASCTHVLLNSCR
Trigger: CCTGCAGCTATTAAGAAGCACGTGTGTGCAGGAAGCGGAGGCGCAGGACCTCACCGCGCCAGCGTGAAGTTCCCGGGCATGGTCATGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 90 bp GGGTACAGCCAGCTCTGGAGCGGCCATTCCCCCATAACAGCCACTTaGGCAAACCGGTGTGTATTTCAACACCAGCCAGGCCAGGACAGG +
Preference number: 1 (lower is better)
Translates to: GYSQLWSGHSPITAT*ANRCVFQHQPGQDR
Trigger: CCTGTCCTGGCCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATGGCCGCTCCAGAGCTGGCTGTACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 90 bp CTCCGGAGACCACTCCCACCAACAAAAGCTGGAGCTATCTGTGGATaGGACCAGGACGGCAGCACGTGGGTAATCGGAGTGCATGCAGCC +
Preference number: 1 (lower is better)
Translates to: LRRPLPPTKAGAICG*DQDGSTWVIGVHAA
Trigger: GGCTGCATGCACTCCGATTACCCACGTGCTGCCGTCCTGGTCTCATCCACAGATAGCTCCAGCTTTTGTTGGTGGGAGTGGTCTCCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 90 bp CACATCCAGGTTCCATTTGCACCCATCAGGCTTTACTGTTTCAGCTaGAGTGTGCTCTCCAGGAGGCGGGCAGCCTGCGCCGTGTGTGGG +
Preference number: 1 (lower is better)
Translates to: HIQVPFAPIRLYCFS*SVLSRRRAACAVCG
Trigger: CCCACACACGGCGCAGGCTGCCCGCCTCCTGGAGAGCACACTTCAGCTGAAACAGTAAAGCCTGATGGGTGCAAATGGAACCTGGATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 90 bp AACCACGCTTTCATGACCATGCCCGGGAACTTCACGCTGGCGCGGTaGGGTCCTGCGCCTCCGCTTCCTGCACACACGTGCTTCTTAATA +
Preference number: 1 (lower is better)
Translates to: NHAFMTMPGNFTLAR*GPAPPLPAHTCFLI
Trigger: TATTAAGAAGCACGTGTGTGCAGGAAGCGGAGGCGCAGGACCTCACCGCGCCAGCGTGAAGTTCCCGGGCATGGTCATGAAAGCGTGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 90 bp AGGTTCCATTTGCACCCATCAGGCTTTACTGTTTCAGCTGAAGTGTaGTCTCCAGGAGGCGGGCAGCCTGCGCCGTGTGTGGGCAGTGAG +
Preference number: 1 (lower is better)
Translates to: RFHLHPSGFTVSAEV*SPGGGQPAPCVGSE
Trigger: CTCACTGCCCACACACGGCGCAGGCTGCCCGCCTCCTGGAGAGCACACTTCAGCTGAAACAGTAAAGCCTGATGGGTGCAAATGGAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 90 bp CGGGAACTTCACGCTGGCGCGGTGAGGTCCTGCGCCTCCGCTTCCTaGACACACGTGCTTCTTAATAGCTGCAGGCTATTTCATGAGAGG +
Preference number: 1 (lower is better)
Translates to: RELHAGAVRSCASAS*THVLLNSCRLFHER
Trigger: CCTCTCATGAAATAGCCTGCAGCTATTAAGAAGCACGTGTGTGCAGGAAGCGGAGGCGCAGGACCTCACCGCGCCAGCGTGAAGTTCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 90 bp GGCGCCGGGCAAGGCACAACAGACACAGAGAGATGCAGCCCGGCCTaGGGCTGCCTCTGCTGCCACCAACTTTTACAAAAGGTTCTAGAA +
Preference number: 1 (lower is better)
Translates to: GAGQGTTDTERCSPA*GCLCCHQLLQKVLE
Trigger: TTCTAGAACCTTTTGTAAAAGTTGGTGGCAGCAGAGGCAGCCCCAGGCCGGGCTGCATCTCTCTGTGTCTGTTGTGCCTTGCCCGGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 90 bp CACGCCCCATGCACCCTCCTGTGCCGTCCCTACCTGGGACACACGTaGACACATCCAGGTTCCATTTGCACCCATCAGGCTTTACTGTTT +
Preference number: 1 (lower is better)
Translates to: HAPCTLLCRPYLGHT*THPGSICTHQALLF
Trigger: AAACAGTAAAGCCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGACGGCACAGGAGGGTGCATGGGGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 90 bp TTCTCTCCCTTTCTCCCTCTGATTTCTTACAGAACCACGCTTTCATaGCCATGCCCGGGAACTTCACGCTGGCGCGGTGAGGTCCTGCGC +
Preference number: 1 (lower is better)
Translates to: FSPFLPLISYRTTLS*PCPGTSRWRGEVLR
Trigger: GCGCAGGACCTCACCGCGCCAGCGTGAAGTTCCCGGGCATGGTCATGAAAGCGTGGTTCTGTAAGAAATCAGAGGGAGAAAGGGAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 90 bp CCGCCAGCAGCATTAGTTAAACACCATTCCAAAGACATTTCTAAGTaGGCGACCCTTGCTCAGCTCCCCCACGCCCCATGCACCCTCCTG +
Preference number: 1 (lower is better)
Translates to: PPAALVKHHSKDISK*ATLAQLPHAPCTLL
Trigger: CAGGAGGGTGCATGGGGCGTGGGGGAGCTGAGCAAGGGTCGCTCACTTAGAAATGTCTTTGGAATGGTGTTTAACTAATGCTGCTGGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 90 bp CGTGTGCTGGTTTCCAGCAGCTCTGGTTTGCGATATGGTTTCGTTTaGTGGCTGAAGATACAGAACCAGGGGCTCGAACCCCTCCAACGC +
Preference number: 1 (lower is better)
Translates to: RVLVSSSSGLRYGFV*WLKIQNQGLEPLQR
Trigger: GCGTTGGAGGGGTTCGAGCCCCTGGTTCTGTATCTTCAGCCAGCAAACGAAACCATATCGCAAACCAGAGCTGCTGGAAACCAGCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 90 bp GTGCTGGTTTCCAGCAGCTCTGGTTTGCGATATGGTTTCGTTTGCTaGCTGAAGATACAGAACCAGGGGCTCGAACCCCTCCAACGCCTG +
Preference number: 1 (lower is better)
Translates to: VLVSSSSGLRYGFVC*LKIQNQGLEPLQRL
Trigger: CAGGCGTTGGAGGGGTTCGAGCCCCTGGTTCTGTATCTTCAGCCAGCAAACGAAACCATATCGCAAACCAGAGCTGCTGGAAACCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 90 bp TGCCGTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTaGACCCATCAGGCTTTACTGTTTCAGCTGAAGTGTGCTCTCCAG +
Preference number: 1 (lower is better)
Translates to: CRPYLGHTCTHPGSI*THQALLFQLKCALQ
Trigger: CTGGAGAGCACACTTCAGCTGAAACAGTAAAGCCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGACGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 90 bp GAGACAGAAACCAACATAGATGAAAGTAAGTGTGCGGGTCCAACCTaGCCAGAGGTGTCTGGACAAGTGTTGAGGCAGCGCGTCCACCAG +
Preference number: 1 (lower is better)
Translates to: ETETNIDESKCAGPT*PEVSGQVLRQRVHQ
Trigger: CTGGTGGACGCGCTGCCTCAACACTTGTCCAGACACCTCTGGCCAGGTTGGACCCGCACACTTACTTTCATCTATGTTGGTTTCTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 90 bp ACTGCTGCAGCAATCACGCCAGCCACGGGTGGAGGCTGTGGGTTCTaGAACGAGACAGAAACCAACATAGATGAAAGTAAGTGTGCGGGT +
Preference number: 1 (lower is better)
Translates to: TAAAITPATGGGCGF*NETETNIDESKCAG
Trigger: ACCCGCACACTTACTTTCATCTATGTTGGTTTCTGTCTCGTTCCAGAACCCACAGCCTCCACCCGTGGCTGGCGTGATTGCTGCAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 90 bp ATGGTGTGTCCTGCTGCTGTGCTGGGCGTCATCTTTTGCGTGTGCTaGTTTCCAGCAGCTCTGGTTTGCGATATGGTTTCGTTTGCTGGC +
Preference number: 1 (lower is better)
Translates to: MVCPAAVLGVIFCVC*FPAALVCDMVSFAG
Trigger: GCCAGCAAACGAAACCATATCGCAAACCAGAGCTGCTGGAAACCAGCACACGCAAAAGATGACGCCCAGCACAGCAGCAGGACACACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 90 bp CTGAGTCTCAAGGGGCTAATGAGACTTCCCCTTGCAGGGCTCTGGTaGGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAAC +
Preference number: 1 (lower is better)
Translates to: LSLKGLMRLPLAGLW*EAHWAQSWAFVGTN
Trigger: GTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGAGCCCTGCAAGGGGAAGTCTCATTAGCCCCTTGAGACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 90 bp CACATGGTGTGTCCTGCTGCTGTGCTGGGCGTCATCTTTTGCGTGTaGTGGTTTCCAGCAGCTCTGGTTTGCGATATGGTTTCGTTTGCT +
Preference number: 1 (lower is better)
Translates to: HMVCPAAVLGVIFCV*WFPAALVCDMVSFA
Trigger: AGCAAACGAAACCATATCGCAAACCAGAGCTGCTGGAAACCAGCACACGCAAAAGATGACGCCCAGCACAGCAGCAGGACACACCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 90 bp CTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTaGGTCCTGTCAGAGAACATATTTTATCACCCTCCACCTGCGGCC +
Preference number: 1 (lower is better)
Translates to: LDLIWTWKTSTYVAG*VLSENIFYHPPPAA
Trigger: GGCCGCAGGTGGAGGGTGATAAAATATGTTCTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 90 bp AACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTTCCAGTCCCAGTaGTGTGTGACCTTGAGCAAGTTACCTAACCTCTCTGAGTCTCAA +
Preference number: 1 (lower is better)
Translates to: NSTGLQFYRAGFQSQ*CVTLSKLPNLSESQ
Trigger: TTGAGACTCAGAGAGGTTAGGTAACTTGCTCAAGGTCACACAGCACTGGGACTGGAAGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 90 bp GTGAAGTCAGATCTGGGATTTCGGCATCTTGACCTCATTTGGACATaGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGAAC +
Preference number: 1 (lower is better)
Translates to: VKSDLGFRHLDLIWT*KTSTYVAGWVLSEN
Trigger: GTTCTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAATCCCAGATCTGACTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 90 bp GGAAGTGTGAAGTCAGATCTGGGATTTCGGCATCTTGACCTCATTTaGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCA +
Preference number: 1 (lower is better)
Translates to: GSVKSDLGFRHLDLI*TWKTSTYVAGWVLS
Trigger: TGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAATCCCAGATCTGACTTCACACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 90 bp TCATCTTTTGCGTGTGCTGGTTTCCAGCAGCTCTGGTTTGCGATATaGTTTCGTTTGCTGGCTGAAGATACAGAACCAGGGGCTCGAACC +
Preference number: 1 (lower is better)
Translates to: SSFACAGFQQLWFAI*FRLLAEDTEPGART
Trigger: GGTTCGAGCCCCTGGTTCTGTATCTTCAGCCAGCAAACGAAACCATATCGCAAACCAGAGCTGCTGGAAACCAGCACACGCAAAAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 90 bp CTGTGCTGGGCGTCATCTTTTGCGTGTGCTGGTTTCCAGCAGCTCTaGTTTGCGATATGGTTTCGTTTGCTGGCTGAAGATACAGAACCA +
Preference number: 1 (lower is better)
Translates to: LCWASSFACAGFQQL*FAIWFRLLAEDTEP
Trigger: TGGTTCTGTATCTTCAGCCAGCAAACGAAACCATATCGCAAACCAGAGCTGCTGGAAACCAGCACACGCAAAAGATGACGCCCAGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 90 bp CAGGGCTCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTaGGTACTAACATTATTCCTCCCTGCCTGCCCCAACAAAACAATC +
Preference number: 1 (lower is better)
Translates to: QGSGEKHIGHSHGHL*VLTLFLPACPNKTI
Trigger: GATTGTTTTGTTGGGGCAGGCAGGGAGGAATAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGAGCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 90 bp CACGAAGCTACAACTTTAAAAGCATCACCTAGACGCGGGTTTAATTaGACTACAGTCCCATGGGTGAGGAGAGCTTTGCCATCCGTGAGG +
Preference number: 1 (lower is better)
Translates to: HEATTLKASPRRGFN*TTVPWVRRALPSVR
Trigger: CCTCACGGATGGCAAAGCTCTCCTCACCCATGGGACTGTAGTGCAATTAAACCCGCGTCTAGGTGATGCTTTTAAAGTTGTAGCTTCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 90 bp TTCGGCATCTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTaGCTGGCTGGGTCCTGTCAGAGAACATATTTTATCACCCTCCAC +
Preference number: 1 (lower is better)
Translates to: FGILTSFGHGKPPPM*LAGSCQRTYFITLH
Trigger: GTGGAGGGTGATAAAATATGTTCTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 90 bp TCTAGAAAAGGGAAGTGTGAAGTCAGATCTGGGATTTCGGCATCTTaGCCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTG +
Preference number: 1 (lower is better)
Translates to: SRKGKCEVRSGISAS*PHLDMENLHLCGWL
Trigger: CAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAATCCCAGATCTGACTTCACACTTCCCTTTTCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp ATGCCCCGCCCCCGCCGCTCCTTAAGCGCATCTGAGATGCCCTCTCCATTCTGCTGCGGTGCGGTGCAGTaGGGTGTGGGGTGTGGTGTG +
Preference number: 2 (lower is better)
Translates to: MPRPRRSLSASEMPSPFCCGAVQ*GVGCGV
Trigger: CACACCACACCCCACACCGCACTGCACCGCACCGCA...GCAGAATGGAGAGGGCATCTCAGATGCGCTTAAGGAGCGGCGGGGGCGGGGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp ATGCCCCGCCCCCGCCGCTCCTTAAGCGCATCTGAGATGCCCTCTCCATTCTGCACCCCGCAGAAGGCATaGGCTGCCACTCGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: MPRPRRSLSASEMPSPFCTPQKA*AATRSQ
Trigger: CTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGT...GCAGAATGGAGAGGGCATCTCAGATGCGCTTAAGGAGCGGCGGGGGCGGGGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CAA 90 bp CTGACGCACTCTCCCTGTGGTGGGGCTGGGCTGGCAGGTTCTCCCTaGCACTGCCCTCGTGAGTGTCGGCTGAGGACACTTCTCACAGCT +
Preference number: 2 (lower is better)
Translates to: LTHSPCGGAGLAGSP*HCPRECRLRTLLTA
Trigger: AGCTGTGAGAAGTGTCCTCAGCCGACACTCACGAGGGCAGTGCAAGGGAGAACCTGCCAGCCCAGCCCCACCACAGGGAGAGTGCGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR TCA 90 bp TGGCACATGGTGTGTCCTGCTGCTGTGCTGGGCGTCATCTTTTGCGTGTGCTGGGGATGCCTGCCCCTCTaGGGCTGCAGGCGAGGACAG +
Preference number: 2 (lower is better)
Translates to: WHMVCPAAVLGVIFCVCWGCLPL*GCRRGQ
Trigger: CTGTCCTCGCCTGCAGCCTCAGAGGGGCAGGCATCC...CCAGCACACGCAAAAGATGACGCCCAGCACAGCAGCAGGACACACCATGTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR TCA 90 bp CAGCTCTGGAGCGGCCATTCCCCCATAACAGCCACTTGGGCAAACCGGTGTGTAAGCCCGCAGGTCCCGTaGCCGCCCTGCCAGTCAAGT +
Preference number: 2 (lower is better)
Translates to: QLWSGHSPITATWANRCVSPQVP*PPCQSS
Trigger: ACTTGACTGGCAGGGCGGTCACGGGACCTGCGGGCT...TACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATGGCCGCTCCAGAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp AAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCCAGCCCGTGCCAGTCAAGTCTGTaGGGGGATGCCTGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: KCQPIPRRRHGLPLGASPCQSSL*GDACPS
Trigger: AGAGGGGCAGGCATCCCCGCACAGACTTGACTGGCA...CGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp ATGCCCCGCCCCCGCCGCTCCTTAAGCGCATCTGAGATGCCCTCTCCATTCTGCCGGTGCAGTGCGGTGTaGGGTGTGGTGTGTTGTGTG +
Preference number: 2 (lower is better)
Translates to: MPRPRRSLSASEMPSPFCRCSAV*GVVCCV
Trigger: CACACAACACACCACACCCCACACCGCACTGCACCG...GCAGAATGGAGAGGGCATCTCAGATGCGCTTAAGGAGCGGCGGGGGCGGGGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR TCA 90 bp ATGCCCCGCCCCCGCCGCTCCTTAAGCGCATCTGAGATGCCCTCTCCATTCTGCTGTGGTGTGGTGTGGTaGGATGTGGCGAGGTACGGT +
Preference number: 2 (lower is better)
Translates to: MPRPRRSLSASEMPSPFCCGVVW*DVARYG
Trigger: ACCGTACCTCGCCACATCTCACCACACCACACCACA...GCAGAATGGAGAGGGCATCTCAGATGCGCTTAAGGAGCGGCGGGGGCGGGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR TCA 90 bp TGGCACATGGTGTGTCCTGCTGCTGTGCTGGGCGTCATCTTTTGCGTGTGCTGGGAGCTTTGCCATCCGTaGGGCGCCGGGCAAGGCACA +
Preference number: 2 (lower is better)
Translates to: WHMVCPAAVLGVIFCVCWELCHP*GAGQGT
Trigger: TGTGCCTTGCCCGGCGCCTCACGGATGGCAAAGCTC...CCAGCACACGCAAAAGATGACGCCCAGCACAGCAGCAGGACACACCATGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR TCA 90 bp ATGCCCCGCCCCCGCCGCTCCTTAAGCGCATCTGAGATGCCCTCTCCATTCTGCCTACAGTCCCATGGGTaGGGAGAGCTTTGCCATCCG +
Preference number: 2 (lower is better)
Translates to: MPRPRRSLSASEMPSPFCLQSHG*GELCHP
Trigger: CGGATGGCAAAGCTCTCCTCACCCATGGGACTGTAG...GCAGAATGGAGAGGGCATCTCAGATGCGCTTAAGGAGCGGCGGGGGCGGGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp ATGCCCCGCCCCCGCCGCTCCTTAAGCGCATCTGAGATGCCCTCTCCATTCTGCCACGGGTGGAGGCTGTaGGTTCTGGAACGAGACAGA +
Preference number: 2 (lower is better)
Translates to: MPRPRRSLSASEMPSPFCHGWRL*VLERDR
Trigger: TCTGTCTCGTTCCAGAACCCACAGCCTCCACCCGTG...GCAGAATGGAGAGGGCATCTCAGATGCGCTTAAGGAGCGGCGGGGGCGGGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp CAGCTCTGGAGCGGCCATTCCCCCATAACAGCCACTTGGGCAAACCGGTGTGTACTGCCCGGCTACCCTTaGTTCTGGGAGGCCTCCGGA +
Preference number: 2 (lower is better)
Translates to: QLWSGHSPITATWANRCVLPGYP*FWEASG
Trigger: TCCGGAGGCCTCCCAGAACCAAGGGTAGCCGGGCAG...TACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATGGCCGCTCCAGAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp CTGTGCCGTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCAGGAGGCGCCACTGCTaGAGCAATCACGCCAGCCAC +
Preference number: 2 (lower is better)
Translates to: LCRPYLGHTCTHPGSICTRRRHC*SNHASH
Trigger: GTGGCTGGCGTGATTGCTGCAGCAGTGGCGCCTCCT...GGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGACGGCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp CTGTGCCGTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCGCTAGGAGGCGCCACTaGTGCAGCAATCACGCCAGC +
Preference number: 2 (lower is better)
Translates to: LCRPYLGHTCTHPGSICTARRRH*CSNHAS
Trigger: GCTGGCGTGATTGCTGCAGCAGTGGCGCCTCCTAGC...GGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGACGGCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp CTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGCTCCCCCACGCCCCATaGACCCTCCTGTGCCGTCCC +
Preference number: 2 (lower is better)
Translates to: LIWTWKTSTYVAGWVLSELPHAP*TLLCRP
Trigger: GGGACGGCACAGGAGGGTGCATGGGGCGTGGGGGAG...CTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CAA 90 bp GGGGTACAGCCAGCTCTGGAGCGGCCATTCCCCCATAACAGCCACTaGGGCAAACCGGTGTGTATTTCAACACCAGCCAGGCCAGGACAG +
Preference number: 2 (lower is better)
Translates to: GVQPALERPFPHNSH*GKPVCISTPARPGQ
Trigger: CTGTCCTGGCCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATGGCCGCTCCAGAGCTGGCTGTACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp CCCTTGCAGGGCTCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGCACGCCAGCCACGGGTaGAGGCTGTGGGTTCTGGAA +
Preference number: 2 (lower is better)
Translates to: PLQGSGEKHIGHSHGHLWHASHG*RLWVLE
Trigger: TTCCAGAACCCACAGCCTCCACCCGTGGCTGGCGTG...CCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGAGCCCTGCAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp CATTCCCCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAACTCTGAAGCCCCTGTaGCCGCCACAGACGCCGGGC +
Preference number: 2 (lower is better)
Translates to: HSPITATWANRCVFQHQPTLKPL*PPQTPG
Trigger: GCCCGGCGTCTGTGGCGGGCACAGGGGCTTCAGAGT...TGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp CAGCTCTGGAGCGGCCATTCCCCCATAACAGCCACTTGGGCAAACCGGTGTGTACTGGGGCTACTAATGTaGAAGGAGGCCCTGGGCCAA +
Preference number: 2 (lower is better)
Translates to: QLWSGHSPITATWANRCVLGLLM*KEALGQ
Trigger: TTGGCCCAGGGCCTCCTTCCACATTAGTAGCCCCAG...TACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATGGCCGCTCCAGAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTGCGTGGGTTCTCTCCTaGCATGGCCAGCGCTCTCCT +
Preference number: 2 (lower is better)
Translates to: GTVRRHQTAQVCSSTELAAWVLS*HGQRSP
Trigger: AGGAGAGCGCTGGCCATGCCAGGAGAGAACCCACGC...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp AGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTTCCAGGCACTCTCCCTGTGGTaGGGCTGGGCTGGCAGGTTC +
Preference number: 2 (lower is better)
Translates to: SEEASNSTGLQFYRAGFQALSLW*GWAGRF
Trigger: GAACCTGCCAGCCCAGCCCCACCACAGGGAGAGTGC...CTGGAAGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CAA 90 bp AGACGCGGGTTTAATTGCACTACAGTCCCATGGGTGAGGAGAGCTTaGCCATCCGTGAGGCGCCGGGCAAGGCACAACAGACACAGAGAG +
Preference number: 2 (lower is better)
Translates to: RRGFNCTTVPWVRRA*PSVRRRARHNRHRE
Trigger: CTCTCTGTGTCTGTTGTGCCTTGCCCGGCGCCTCACGGATGGCAAAGCTCTCCTCACCCATGGGACTGTAGTGCAATTAAACCCGCGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp GTCCTGTCAGAGAACATATTTTATCACCCTCCACCTGCGGCCTGGGGGCTCCCTGTTTCAGCTGAAGTGTaGTCTCCAGGAGGCGGGCAG +
Preference number: 2 (lower is better)
Translates to: VLSENIFYHPPPAAWGLPVSAEV*SPGGGQ
Trigger: CTGCCCGCCTCCTGGAGAGCACACTTCAGCTGAAAC...AGGGAGCCCCCAGGCCGCAGGTGGAGGGTGATAAAATATGTTCTCTGACAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp CCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCAGCTTTGTCTCAGGACGGCAGCACGTaGGTAATCGGAGTGCATGCA +
Preference number: 2 (lower is better)
Translates to: PQLPGQSVWHGMCSAALSQDGST*VIGVHA
Trigger: TGCATGCACTCCGATTACCCACGTGCTGCCGTCCTG...AGACAAAGCTGCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp TTTCGGCATCTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCACACGCAGATGCCAGTaGGCGGGGTGGGCACTGCCC +
Preference number: 2 (lower is better)
Translates to: FRHLDLIWTWKTSTYVAGTRRCQ*AGWALP
Trigger: GGGCAGTGCCCACCCCGCCCACTGGCATCTGCGTGT...GCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp CTTCTCACAGCTCAGGCACCACACTCGGCCAGGTTTGGAAAAAGTCTAGTTTATAGGGGGCGGGATGTGTaGCAGGGCGGCCTAGCCCTC +
Preference number: 2 (lower is better)
Translates to: LLTAQAPHSARFGKSLVYRGRDV*QGGLAL
Trigger: GAGGGCTAGGCCGCCCTGCCACACATCCCGCCCCCT...ATAAACTAGACTTTTTCCAAACCTGGCCGAGTGTGGTGCCTGAGCTGTGAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp TGGCACATGGTGTGTCCTGCTGCTGTGCTGGGCGTCATCTTTTGCGTGTGCTGGCTCCACCTATGTGGCTaGCTGGGTCCTGTCAGAGAA +
Preference number: 2 (lower is better)
Translates to: WHMVCPAAVLGVIFCVCWLHLCG*LGPVRE
Trigger: TTCTCTGACAGGACCCAGCCAGCCACATAGGTGGAG...CCAGCACACGCAAAAGATGACGCCCAGCACAGCAGCAGGACACACCATGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR TCA 90 bp TTTCGGCATCTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCCAGTCGCCACTGTCCTaGGCTAGGAGGCGCCACTGC +
Preference number: 2 (lower is better)
Translates to: FRHLDLIWTWKTSTYVAGQSPLS*ARRRHC
Trigger: GCAGTGGCGCCTCCTAGCTCAGGACAGTGGCGACTG...GCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR TCA 90 bp CCCTTGCAGGGCTCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGCTCTTCACACGGCCTaGGGTTTCTTGCTGAGGTCA +
Preference number: 2 (lower is better)
Translates to: PLQGSGEKHIGHSHGHLWALHTA*GFLLRS
Trigger: TGACCTCAGCAAGAAACCTCAGGCCGTGTGAAGAGC...CCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGAGCCCTGCAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp CTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGGGTAATCGGAGTGCATaGAGCCGGGCAGTCGCCACT +
Preference number: 2 (lower is better)
Translates to: LIWTWKTSTYVAGWVLSEGNRSA*SRAVAT
Trigger: AGTGGCGACTGCCCGGCTGCATGCACTCCGATTACC...CTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp CTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGGAGCACATCCCGCGCTaGAGAGAGCTGACCTTTGGC +
Preference number: 2 (lower is better)
Translates to: LIWTWKTSTYVAGWVLSEEHIPR*RELTFG
Trigger: GCCAAAGGTCAGCTCTCTGCAGCGCGGGATGTGCTC...CTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp GTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGGTTGTGGTGTGCATGTaGGTGGGTTCTCTCCTGGCA +
Preference number: 2 (lower is better)
Translates to: VPTWDTRAHIQVPFAPIRVVVCM*VGSLLA
Trigger: TGCCAGGAGAGAACCCACGCACATGCACACCACAAC...CCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR TCA 90 bp CATTCCCCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCATGTCTGGACAAGTGTTaGGGCAGCGCGTCCACCAGG +
Preference number: 2 (lower is better)
Translates to: HSPITATWANRCVFQHQPCLDKC*GSASTR
Trigger: CCTGGTGGACGCGCTGCCTCAACACTTGTCCAGACA...TGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp CCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGCTTTGTGGTGAGGTATGGTaGAGTGCGGTGTGGTGTGGT +
Preference number: 2 (lower is better)
Translates to: PTWDTRAHIQVPFAPIRLCGEVW*SAVWCG
Trigger: ACCACACCACACCGCACTGCACCATACCTCACCACA...AAGCCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTAGCAGAAGGCATGGGCTaGCACTCGGAGCCAGCCCGC +
Preference number: 2 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLAEGMG*HSEPAR
Trigger: GCGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGC...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTAGGGCGGGGTGGGCACTaGCCATTGTCTGAAGGGGCC +
Preference number: 2 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLGRGGH*PLSEGA
Trigger: GGCCCCTTCAGACAATGGGCAGTGCCCACCCCGCCC...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp CCCTTGCAGGGCTCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGCTGGGCGTCATCTTTTaGGTGTGCTGGTTTCCAGCA +
Preference number: 2 (lower is better)
Translates to: PLQGSGEKHIGHSHGHLWLGVIF*VCWFPA
Trigger: TGCTGGAAACCAGCACACGCAAAAGATGACGCCCAG...CCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGAGCCCTGCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp ATCCCGAATTCCAGTTGTGATGTTGATGAACGAGAGTGTGTAGACCCTGGGGGCATGGCTCCCCGCATTTaGTGGGAGGCCTCTAGAGGC +
Preference number: 2 (lower is better)
Translates to: IPNSSCDVDERECVDPGGMAPRI*WEASRG
Trigger: GCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCAT...GCCCCCAGGGTCTACACACTCTCGTTCATCAACATCACAACTGGAATTCGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
3UTR-3UTR CCA 90 bp CTTCTCACAGCTCAGGCACCACACTCGGCCAGGTTTGGAAAAAGTCTAGTTTATTGTGGAAGGAGGCCCTaGGCCAAACCAGCTGCCCGG +
Preference number: 2 (lower is better)
Translates to: LLTAQAPHSARFGKSLVYCGRRP*AKPAAR
Trigger: CCGGGCAGCTGGTTTGGCCCAGGGCCTCCTTCCACA...ATAAACTAGACTTTTTCCAAACCTGGCCGAGTGTGGTGCCTGAGCTGTGAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp AGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTTCCAGTGTGCCGTCCCTACCTaGGACACACGTGCACACATC +
Preference number: 2 (lower is better)
Translates to: SEEASNSTGLQFYRAGFQCAVPT*DTRAHI
Trigger: GATGTGTGCACGTGTGTCCCAGGTAGGGACGGCACA...CTGGAAGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp CCCTTGCAGGGCTCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGCTGAGGTCATTTCCTaGCACATGGTGTGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: PLQGSGEKHIGHSHGHLWAEVIS*HMVCPA
Trigger: AGCAGGACACACCATGTGCCAGGAAATGACCTCAGC...CCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGAGCCCTGCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CAA 90 bp TTCCTGGCACATGGTGTGTCCTGCTGCTGTGCTGGGCGTCATCTTTaGCGTGTGCTGGTTTCCAGCAGCTCTGGTTTGCGATATGGTTTC +
Preference number: 2 (lower is better)
Translates to: FLAHGVSCCCAGRHL*RVLVSSSSGLRYGF
Trigger: GAAACCATATCGCAAACCAGAGCTGCTGGAAACCAGCACACGCAAAAGATGACGCCCAGCACAGCAGCAGGACACACCATGTGCCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp CATTCCCCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCATGGCAGGTTCTCCCTTaGACTGCCCTCGTGAGTGTC +
Preference number: 2 (lower is better)
Translates to: HSPITATWANRCVFQHQPWQVLP*TALVSV
Trigger: GACACTCACGAGGGCAGTGCAAGGGAGAACCTGCCA...TGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp CTTCTCACAGCTCAGGCACCACACTCGGCCAGGTTTGGAAAAAGTCTAGTTTATAGCCTGCGCCGTGTGTaGGCAGTGAGGTGTGGTGTG +
Preference number: 2 (lower is better)
Translates to: LLTAQAPHSARFGKSLVYSLRRV*AVRCGV
Trigger: CACACCACACCTCACTGCCCACACACGGCGCAGGCT...ATAAACTAGACTTTTTCCAAACCTGGCCGAGTGTGGTGCCTGAGCTGTGAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CAA 90 bp GCTGGGCGTCATCTTTTGCGTGTGCTGGTTTCCAGCAGCTCTGGTTaGCGATATGGTTTCGTTTGCTGGCTGAAGATACAGAACCAGGGG +
Preference number: 2 (lower is better)
Translates to: AGRHLLRVLVSSSSG*RYGFVCWLKIQNQG
Trigger: CCCCTGGTTCTGTATCTTCAGCCAGCAAACGAAACCATATCGCAAACCAGAGCTGCTGGAAACCAGCACACGCAAAAGATGACGCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR TCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTACGCGCTGCAGAGAGCTaGCCTTTGGCTCCATCTGGC +
Preference number: 2 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLRAAES*PLAPSG
Trigger: GCCAGATGGAGCCAAAGGTCAGCTCTCTGCAGCGCG...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp CCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAGGCCAGACCTATGTGGCTGGCTaGGTCCTGTCAGAGAACATA +
Preference number: 2 (lower is better)
Translates to: PITATWANRCVFQHQPGQTYVAG*VLSENI
Trigger: TATGTTCTCTGACAGGACCCAGCCAGCCACATAGGT...CTGGCCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp CCCTTGCAGGGCTCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGGTTTCCAGCAGCTCTaGTTTGCGATATGGTTTCGT +
Preference number: 2 (lower is better)
Translates to: PLQGSGEKHIGHSHGHLWGFQQL*FAIWFR
Trigger: ACGAAACCATATCGCAAACCAGAGCTGCTGGAAACC...CCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGAGCCCTGCAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR TCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTATCACACACAGCTCCATaGGGAGGCAGCCCTGGACCT +
Preference number: 2 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLSHTAP*GGSPGP
Trigger: AGGTCCAGGGCTGCCTCCTCATGGAGCTGTGTGTGA...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTACTGGGCCAAACCAGCTaGCCGGCTACCCTTGGTTCT +
Preference number: 2 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLLGQTS*PATLGS
Trigger: AGAACCAAGGGTAGCCGGGCAGCTGGTTTGGCCCAG...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTCATCCAGGTTCCATTTaGACCCATCAGGCTTTACTG +
Preference number: 2 (lower is better)
Translates to: GTVRRHQTAQVCSSTELAHPGSI*THQALL
Trigger: CAGTAAAGCCTGATGGGTGCAAATGGAACCTGGATG...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp TGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATAGCCCGGCCTGGGGCTaGCTCTGCTGCCACCAACTT +
Preference number: 2 (lower is better)
Translates to: CRLFHERNLLTLTWLFPNSPAWG*LCCHQL
Trigger: AAGTTGGTGGCAGCAGAGGCAGCCCCAGGCCGGGCT...ATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAATAGCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp TGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATCCGGCCTCAGCTTCCTaGCCAGAGCGTCTGGCATGG +
Preference number: 2 (lower is better)
Translates to: CRLFHERNLLTLTWLFPNPASAS*PERLAW
Trigger: CCATGCCAGACGCTCTGGCCAGGAAGCTGAGGCCGG...ATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAATAGCCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CAA 90 bp TTGCAGGGCTCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTaGTGGGTACTAACATTATTCCTCCCTGCCTGCCCCAACAAAACA +
Preference number: 2 (lower is better)
Translates to: LQGSGEKHIGHSHGH*WVLTLFLPACPNKT
Trigger: TGTTTTGTTGGGGCAGGCAGGGAGGAATAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGAGCCCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTATGTGCGGGTCCAACCTaGCCAGAGGTGTCTGGACAA +
Preference number: 2 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLCAGPT*PEVSGQ
Trigger: TTGTCCAGACACCTCTGGCCAGGTTGGACCCGCACA...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp TGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATATGAGGAGGCAGCCCTaGACCTCACCCCACAGCGTC +
Preference number: 2 (lower is better)
Translates to: CRLFHERNLLTLTWLFPNMRRQP*TSPHSV
Trigger: GACGCTGTGGGGTGAGGTCCAGGGCTGCCTCCTCAT...ATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAATAGCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR TCA 90 bp AAGCCTTTGCCATCCAGAAATCAGACAGTTTTCCCACTGGTTTTAGATTCTTTAACCAGGGAGTCACTCTaGAGCCCCTGTGCCCGCCAC +
Preference number: 2 (lower is better)
Translates to: KPLPSRNQTVFPLVLDSLTRESL*SPCARH
Trigger: GTGGCGGGCACAGGGGCTTCAGAGTGACTCCCTGGT...TAAAGAATCTAAAACCAGTGGGAAAACTGTCTGATTTCTGGATGGCAAAGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR TCA 90 bp TTTCGGCATCTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCCTTTACTGTTTCAGCTaGAGTGTGCTCTCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: FRHLDLIWTWKTSTYVAGLYCFS*SVLSRR
Trigger: CCTCCTGGAGAGCACACTTCAGCTGAAACAGTAAAG...GCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp TTTCGGCATCTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCGTCTGGCATGGAATGTaGTCTGCAGCTTTGTCTCTG +
Preference number: 2 (lower is better)
Translates to: FRHLDLIWTWKTSTYVAGVWHGM*SAALSL
Trigger: CAGAGACAAAGCTGCAGAGCACATTCCATGCCAGAC...GCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp TTTCGGCATCTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTTGTGTGTTGTGGTGTaGATGTGCGTGGGTTCTCTC +
Preference number: 2 (lower is better)
Translates to: FRHLDLIWTWKTSTYVAGLCVVV*MCVGSL
Trigger: GAGAGAACCCACGCACATGCACACCACAACACACAA...GCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp CTTCTCACAGCTCAGGCACCACACTCGGCCAGGTTTGGAAAAAGTCTAGTTTATAAAAAGCAGCCAGCCTaGTGTCCTGTCCTGAAGCTG +
Preference number: 2 (lower is better)
Translates to: LLTAQAPHSARFGKSLVYKKQPA*CPVLKL
Trigger: CAGCTTCAGGACAGGACACCAGGCTGGCTGCTTTTT...ATAAACTAGACTTTTTCCAAACCTGGCCGAGTGTGGTGCCTGAGCTGTGAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp AGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTTCCAGAACATTATTCCTCCCTaGCTGCCCCAACAAAACAAT +
Preference number: 2 (lower is better)
Translates to: SEEASNSTGLQFYRAGFQNIIPP*LPQQNN
Trigger: ATTGTTTTGTTGGGGCAGGCAGGGAGGAATAATGTT...CTGGAAGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp TGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATCTGGCCAGAGGTGTCTaGACAAGTGTTGAGGCAGCG +
Preference number: 2 (lower is better)
Translates to: CRLFHERNLLTLTWLFPNLARGV*TSVEAA
Trigger: CGCTGCCTCAACACTTGTCCAGACACCTCTGGCCAG...ATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAATAGCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp CATTCCCCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCACATCTTGACCTCATTTaGACATGGAAAACCTCCACC +
Preference number: 2 (lower is better)
Translates to: HSPITATWANRCVFQHQPHLDLI*TWKTST
Trigger: GGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATG...TGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTAAGACGCGGGTTTAATTaGACTACAGTCCCATGGGTG +
Preference number: 2 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLRRGFN*TTVPWV
Trigger: CACCCATGGGACTGTAGTGCAATTAAACCCGCGTCT...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp TGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATAAACCTCCACCTATGTaGCTGGCTGGGTCCTGTCAG +
Preference number: 2 (lower is better)
Translates to: CRLFHERNLLTLTWLFPNKPPPM*LAGSCQ
Trigger: CTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTT...ATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAATAGCCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTACCAGCAGCTCTGGTTTaGGATATGGTTTCGTTTGCT +
Preference number: 2 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLPAALV*DMVSFA
Trigger: AGCAAACGAAACCATATCGCAAACCAGAGCTGCTGG...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR TCA 90 bp TGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATAAAGACATTTCTAAGTaGGCGACCCTTGCTCAGCTC +
Preference number: 2 (lower is better)
Translates to: CRLFHERNLLTLTWLFPNKDISK*ATLAQL
Trigger: GAGCTGAGCAAGGGTCGCTCACTTAGAAATGTCTTT...ATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAATAGCCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp TGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATCATTGGGCACAGTCATaGGCATTTGTGGGTACTAAC +
Preference number: 2 (lower is better)
Translates to: CRLFHERNLLTLTWLFPNHWAQS*AFVGTN
Trigger: GTTAGTACCCACAAATGCCCATGACTGTGCCCAATG...ATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAATAGCCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR GCA 90 bp AAGCCTTTGCCATCCAGAAATCAGACAGTTTTCCCACTGGTTTTAGATTCTTTAGTCATCTTTTGCGTGTaGTGGTTTCCAGCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: KPLPSRNQTVFPLVLDSLVIFCV*WFPAAL
Trigger: CAGAGCTGCTGGAAACCAGCACACGCAAAAGATGAC...TAAAGAATCTAAAACCAGTGGGAAAACTGTCTGATTTCTGGATGGCAAAGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp TGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATGACCTCATTTGGACATaGAAAACCTCCACCTATGTG +
Preference number: 2 (lower is better)
Translates to: CRLFHERNLLTLTWLFPNDLIWT*KTSTYV
Trigger: CACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTC...ATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAATAGCCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CCA 90 bp AAGCCTTTGCCATCCAGAAATCAGACAGTTTTCCCACTGGTTTTAGATTCTTTATATGGTTTCGTTTGCTaGCTGAAGATACAGAACCAG +
Preference number: 2 (lower is better)
Translates to: KPLPSRNQTVFPLVLDSLYGFVC*LKIQNQ
Trigger: CTGGTTCTGTATCTTCAGCCAGCAAACGAAACCATA...TAAAGAATCTAAAACCAGTGGGAAAACTGTCTGATTTCTGGATGGCAAAGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 72 bp CATGGGCTGCCACTCGGAGCCAGCCCGCAGGTCCCGTaGCCGCCCTGCCAGTCAAGTCTGTGCGGGGATGCC +
Preference number: 3 (lower is better)
Translates to: HGLPLGASPQVP*PPCQSSLCGDA
Trigger: GGCATCCCCGCACAGACTTGACTGGCAGGGCGGTCACGGGACCTGCGGGCTGGCTCCGAGTGGCAGCCCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 72 bp GGCCAGGACAGGTCTGCTGACGCACTCTCCCTGTGGTaGGGCTGGGCTGGCAGGTTCTCCCTTGCACTGCCC +
Preference number: 3 (lower is better)
Translates to: GQDRSADALSLW*GWAGRFSLALP
Trigger: GGGCAGTGCAAGGGAGAACCTGCCAGCCCAGCCCCACCACAGGGAGAGTGCGTCAGCAGACCTGTCCTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 72 bp ACGTACGGACCGGCTTCCCCAGTAGGGCGGCGCCAATaGGGGGCTCCCAAGCTGCTCCCATCTCACCTCTGC +
Preference number: 3 (lower is better)
Translates to: TYGPASPVGRRQ*GAPKLLPSHLC
Trigger: GCAGAGGTGAGATGGGAGCAGCTTGGGAGCCCCCCATTGGCGCCGCCCTACTGGGGAAGCCGGTCCGTACGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 72 bp TCCAGGAGGCGGGCAGCCTGCGCCGTGTGTGGGCAGTaGGGTGTGGTGTGGTGTGGTGTGGTGAGATGTGGC +
Preference number: 3 (lower is better)
Translates to: SRRRAACAVCGQ*GVVWCGVVRCG
Trigger: GCCACATCTCACCACACCACACCACACCACACCTCACTGCCCACACACGGCGCAGGCTGCCCGCCTCCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 72 bp TCAAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTaGCACTCGGAGCCAGCCCGCAGGTCCCGTGACCGC +
Preference number: 3 (lower is better)
Translates to: SSVNPYPAEGMG*HSEPARRSRDR
Trigger: GCGGTCACGGGACCTGCGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 72 bp TGTGCTCTCCAGGAGGCGGGCAGCCTGCGCCGTGTGTaGGCAGTGAGGTGTGGTGTGGTGTGGTGTGGTGAG +
Preference number: 3 (lower is better)
Translates to: CALQEAGSLRRV*AVRCGVVWCGE
Trigger: CTCACCACACCACACCACACCACACCTCACTGCCCACACACGGCGCAGGCTGCCCGCCTCCTGGAGAGCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 72 bp ATCGGAGTGCATGCAGCCGGGCAGTCGCCACTGTCCTaGGCTAGGAGGCGCCACTGCTGCAGCAATCACGCC +
Preference number: 3 (lower is better)
Translates to: IGVHAAGQSPLS*ARRRHCCSNHA
Trigger: GGCGTGATTGCTGCAGCAGTGGCGCCTCCTAGCTCAGGACAGTGGCGACTGCCCGGCTGCATGCACTCCGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 72 bp TTCATGACCATGCCCGGGAACTTCACGCTGGCGCGGTaGGGTCCTGCGCCTCCGCTTCCTGCACACACGTGC +
Preference number: 3 (lower is better)
Translates to: FMTMPGNFTLAR*GPAPPLPAHTC
Trigger: GCACGTGTGTGCAGGAAGCGGAGGCGCAGGACCTCACCGCGCCAGCGTGAAGTTCCCGGGCATGGTCATGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 72 bp CTAGCCTGTTGCCTGGCCCTCCGAGGGTCTGGGCCATaGCATTCAATAGAGTGGCCCCTGCTGGGGCTCCAC +
Preference number: 3 (lower is better)
Translates to: LACCLALRGSGP*HSIEWPLLGLH
Trigger: GTGGAGCCCCAGCAGGGGCCACTCTATTGAATGGCATGGCCCAGACCCTCGGAGGGCCAGGCAACAGGCTAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 72 bp GCCAGCGCTCTCCTCTCAAGCCCGGCCTCAGCTTCCTaGCCAGAGCGTCTGGCATGGAATGTGCTCTGCAGC +
Preference number: 3 (lower is better)
Translates to: ASALLSSPASAS*PERLAWNVLCS
Trigger: GCTGCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGGCCGGGCTTGAGAGGAGAGCGCTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 72 bp ACCTGTCAAGTGTCAACCCATACCCCGCAGAAGGCATaGGCTGCCACTCGGAGCCAGCCCGCAGGTCCCGTG +
Preference number: 3 (lower is better)
Translates to: TCQVSTHTPQKA*AATRSQPAGPV
Trigger: CACGGGACCTGCGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTTGACAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 72 bp GGCCTTGCTAGCCTGTTGCCTGGCCCTCCGAGGGTCTaGGCCATGCCATTCAATAGAGTGGCCCCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: GLASLLPGPPRV*AMPFNRVAPAG
Trigger: CCCAGCAGGGGCCACTCTATTGAATGGCATGGCCCAGACCCTCGGAGGGCCAGGCAACAGGCTAGCAAGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 72 bp GGCTGGGCTGGCAGGTTCTCCCTTGCACTGCCCTCGTaGGTGTCGGCTGAGGACACTTCTCACAGCTCAGGC +
Preference number: 3 (lower is better)
Translates to: GWAGRFSLALPS*VSAEDTSHSSG
Trigger: GCCTGAGCTGTGAGAAGTGTCCTCAGCCGACACTCACGAGGGCAGTGCAAGGGAGAACCTGCCAGCCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 72 bp CCTGGGCCAAACCAGCTGCCCGGCTACCCTTGGTTCTaGGAGGCCTCCGGAGACCACTCCCACCAACAAAAG +
Preference number: 3 (lower is better)
Translates to: PGPNQLPGYPWF*EASGDHSHQQK
Trigger: CTTTTGTTGGTGGGAGTGGTCTCCGGAGGCCTCCCAGAACCAAGGGTAGCCGGGCAGCTGGTTTGGCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CAA 90 bp ATGCCCCGCCCCCGCCGCTCCTTAAGCGCATCTGAGATGCCCTCTCCATTCTGCGCTGGGCGTCATCTTTaGCGTGTGCTGGTTTCCAGC +
Preference number: 3 (lower is better)
Translates to: MPRPRRSLSASEMPSPFCAGRHL*RVLVSS
Trigger: GCTGGAAACCAGCACACGCAAAAGATGACGCCCAGC...GCAGAATGGAGAGGGCATCTCAGATGCGCTTAAGGAGCGGCGGGGGCGGGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 72 bp TGTATTTCAACACCAGCCAGGCCAGGACAGGTCTGCTaGCGCACTCTCCCTGTGGTGGGGCTGGGCTGGCAG +
Preference number: 3 (lower is better)
Translates to: CISTPARPGQVC*RTLPVVGLGWQ
Trigger: CTGCCAGCCCAGCCCCACCACAGGGAGAGTGCGTCAGCAGACCTGTCCTGGCCTGGCTGGTGTTGAAATACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 72 bp TGTGGTGGGGCTGGGCTGGCAGGTTCTCCCTTGCACTaGCCTCGTGAGTGTCGGCTGAGGACACTTCTCACA +
Preference number: 3 (lower is better)
Translates to: CGGAGLAGSPLH*PRECRLRTLLT
Trigger: TGTGAGAAGTGTCCTCAGCCGACACTCACGAGGGCAGTGCAAGGGAGAACCTGCCAGCCCAGCCCCACCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 72 bp CATGCCCGGGAACTTCACGCTGGCGCGGTGAGGTCCTaGGCCTCCGCTTCCTGCACACACGTGCTTCTTAAT +
Preference number: 3 (lower is better)
Translates to: HARELHAGAVRS*ASASCTHVLLN
Trigger: ATTAAGAAGCACGTGTGTGCAGGAAGCGGAGGCGCAGGACCTCACCGCGCCAGCGTGAAGTTCCCGGGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 72 bp CCCACGCCCCATGCACCCTCCTGTGCCGTCCCTACCTaGGACACACGTGCACACATCCAGGTTCCATTTGCA +
Preference number: 3 (lower is better)
Translates to: PTPHAPSCAVPT*DTRAHIQVPFA
Trigger: TGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGACGGCACAGGAGGGTGCATGGGGCGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 72 bp CAGGTTCTCCCTTGCACTGCCCTCGTGAGTGTCGGCTaGGGACACTTCTCACAGCTCAGGCACCACACTCGG +
Preference number: 3 (lower is better)
Translates to: QVLPCTALVSVG*GHFSQLRHHTR
Trigger: CCGAGTGTGGTGCCTGAGCTGTGAGAAGTGTCCTCAGCCGACACTCACGAGGGCAGTGCAAGGGAGAACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 72 bp TCTCAAGCCCGGCCTCAGCTTCCTGGCCAGAGCGTCTaGCATGGAATGTGCTCTGCAGCTTTGTCTCTGGGG +
Preference number: 3 (lower is better)
Translates to: SQARPQLPGQSV*HGMCSAALSLG
Trigger: CCCCAGAGACAAAGCTGCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGGCCGGGCTTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 72 bp TCCTCCTCAGAGGCTACCATGGGGTACAGCCAGCTCTaGAGCGGCCATTCCCCCATAACAGCCACTTGGGCA +
Preference number: 3 (lower is better)
Translates to: SSSEATMGYSQL*SGHSPITATWA
Trigger: TGCCCAAGTGGCTGTTATGGGGGAATGGCCGCTCCAGAGCTGGCTGTACCCCATGGTAGCCTCTGAGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CAA 90 bp TGGCACATGGTGTGTCCTGCTGCTGTGCTGGGCGTCATCTTTTGCGTGTGCTGGCTGGCAGGTTCTCCCTaGCACTGCCCTCGTGAGTGT +
Preference number: 3 (lower is better)
Translates to: WHMVCPAAVLGVIFCVCWLAGSP*HCPREC
Trigger: ACACTCACGAGGGCAGTGCAAGGGAGAACCTGCCAG...CCAGCACACGCAAAAGATGACGCCCAGCACAGCAGCAGGACACACCATGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 72 bp TGCACCCTCCTGTGCCGTCCCTACCTGGGACACACGTaGACACATCCAGGTTCCATTTGCACCCATCAGGCT +
Preference number: 3 (lower is better)
Translates to: CTLLCRPYLGHT*THPGSICTHQA
Trigger: AGCCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGACGGCACAGGAGGGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 72 bp CGCTCCTTAAGCGCATCTGAGATGCCCTCTCCATTCTaGTCCCTCCCTGTGGGCCTTGCTAGCCTGTTGCCT +
Preference number: 3 (lower is better)
Translates to: RSLSASEMPSPF*SLPVGLASLLP
Trigger: AGGCAACAGGCTAGCAAGGCCCACAGGGAGGGAGCAGAATGGAGAGGGCATCTCAGATGCGCTTAAGGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 72 bp GTTCCATTTGCACCCATCAGGCTTTACTGTTTCAGCTaGAGTGTGCTCTCCAGGAGGCGGGCAGCCTGCGCC +
Preference number: 3 (lower is better)
Translates to: VPFAPIRLYCFS*SVLSRRRAACA
Trigger: GGCGCAGGCTGCCCGCCTCCTGGAGAGCACACTTCAGCTGAAACAGTAAAGCCTGATGGGTGCAAATGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 72 bp TCACCTAGACGCGGGTTTAATTGCACTACAGTCCCATaGGTGAGGAGAGCTTTGCCATCCGTGAGGCGCCGG +
Preference number: 3 (lower is better)
Translates to: SPRRGFNCTTVP*VRRALPSVRRR
Trigger: CCGGCGCCTCACGGATGGCAAAGCTCTCCTCACCCATGGGACTGTAGTGCAATTAAACCCGCGTCTAGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 72 bp CAGCTCTGGAGCGGCCATTCCCCCATAACAGCCACTTaGGCAAACCGGTGTGTATTTCAACACCAGCCAGGC +
Preference number: 3 (lower is better)
Translates to: QLWSGHSPITAT*ANRCVFQHQPG
Trigger: GCCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATGGCCGCTCCAGAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 72 bp CCACTCCCACCAACAAAAGCTGGAGCTATCTGTGGATaGGACCAGGACGGCAGCACGTGGGTAATCGGAGTG +
Preference number: 3 (lower is better)
Translates to: PLPPTKAGAICG*DQDGSTWVIGV
Trigger: CACTCCGATTACCCACGTGCTGCCGTCCTGGTCTCATCCACAGATAGCTCCAGCTTTTGTTGGTGGGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 72 bp TGCTGGGGGTTTGGGCCAGTGTTCCTTCTGCTTTTGTaGAGGGCCCTTACACTCGACTCGAAGTGCTCCTCC +
Preference number: 3 (lower is better)
Translates to: CWGFGPVFLLLL*RALTLDSKCSS
Trigger: GGAGGAGCACTTCGAGTCGAGTGTAAGGGCCCTTCACAAAAGCAGAAGGAACACTGGCCCAAACCCCCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 72 bp GACGGGACAGTGAGGAGGCATCAAACAGCACAGGTCTaGAGTTCTACAGAGCTGGCTTCCAGTCCCAGTGCT +
Preference number: 3 (lower is better)
Translates to: DGTVRRHQTAQV*SSTELASSPSA
Trigger: AGCACTGGGACTGGAAGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 72 bp CTCTCTGAGTCTCAAGGGGCTAATGAGACTTCCCCTTaGAGGGCTCTGGTGAGAAGCACATTGGGCACAGTC +
Preference number: 3 (lower is better)
Translates to: LSESQGANETSP*RALVRSTLGTV
Trigger: GACTGTGCCCAATGTGCTTCTCACCAGAGCCCTGCAAGGGGAAGTCTCATTAGCCCCTTGAGACTCAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 72 bp CCTGCTGCTGTGCTGGGCGTCATCTTTTGCGTGTGCTaGTTTCCAGCAGCTCTGGTTTGCGATATGGTTTCG +
Preference number: 3 (lower is better)
Translates to: PAAVLGVIFCVC*FPAALVCDMVS
Trigger: CGAAACCATATCGCAAACCAGAGCTGCTGGAAACCAGCACACGCAAAAGATGACGCCCAGCACAGCAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 72 bp AAGGGGCTAATGAGACTTCCCCTTGCAGGGCTCTGGTaGGAAGCACATTGGGCACAGTCATGGGCATTTGTG +
Preference number: 3 (lower is better)
Translates to: KGLMRLPLAGLW*EAHWAQSWAFV
Trigger: CACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGAGCCCTGCAAGGGGAAGTCTCATTAGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 72 bp TTTCTCCCTCTGATTTCTTACAGAACCACGCTTTCATaGCCATGCCCGGGAACTTCACGCTGGCGCGGTGAG +
Preference number: 3 (lower is better)
Translates to: FLPLISYRTTLS*PCPGTSRWRGE
Trigger: CTCACCGCGCCAGCGTGAAGTTCCCGGGCATGGTCATGAAAGCGTGGTTCTGTAAGAAATCAGAGGGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 72 bp TGTCCTGCTGCTGTGCTGGGCGTCATCTTTTGCGTGTaGTGGTTTCCAGCAGCTCTGGTTTGCGATATGGTT +
Preference number: 3 (lower is better)
Translates to: CPAAVLGVIFCV*WFPAALVCDMV
Trigger: AACCATATCGCAAACCAGAGCTGCTGGAAACCAGCACACGCAAAAGATGACGCCCAGCACAGCAGCAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 72 bp TCCAGCAGCTCTGGTTTGCGATATGGTTTCGTTTGCTaGCTGAAGATACAGAACCAGGGGCTCGAACCCCTC +
Preference number: 3 (lower is better)
Translates to: SSSSGLRYGFVC*LKIQNQGLEPL
Trigger: GAGGGGTTCGAGCCCCTGGTTCTGTATCTTCAGCCAGCAAACGAAACCATATCGCAAACCAGAGCTGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 72 bp GGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTaGCTTCCAGTCCCAGTGCTGTGTGACCTTGAGCAA +
Preference number: 3 (lower is better)
Translates to: GIKQHRSAVLQS*LPVPVLCDLEQ
Trigger: TTGCTCAAGGTCACACAGCACTGGGACTGGAAGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 72 bp GTTTCCAGCAGCTCTGGTTTGCGATATGGTTTCGTTTaGTGGCTGAAGATACAGAACCAGGGGCTCGAACCC +
Preference number: 3 (lower is better)
Translates to: VSSSSGLRYGFV*WLKIQNQGLEP
Trigger: GGGTTCGAGCCCCTGGTTCTGTATCTTCAGCCAGCAAACGAAACCATATCGCAAACCAGAGCTGCTGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 72 bp GGTCTGCAGTTCTACAGAGCTGGCTTCCAGTCCCAGTaGTGTGTGACCTTGAGCAAGTTACCTAACCTCTCT +
Preference number: 3 (lower is better)
Translates to: GLQFYRAGFQSQ*CVTLSKLPNLS
Trigger: AGAGAGGTTAGGTAACTTGCTCAAGGTCACACAGCACTGGGACTGGAAGCCAGCTCTGTAGAACTGCAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 72 bp GCAATCACGCCAGCCACGGGTGGAGGCTGTGGGTTCTaGAACGAGACAGAAACCAACATAGATGAAAGTAAG +
Preference number: 3 (lower is better)
Translates to: AITPATGGGCGF*NETETNIDESK
Trigger: CTTACTTTCATCTATGTTGGTTTCTGTCTCGTTCCAGAACCCACAGCCTCCACCCGTGGCTGGCGTGATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 72 bp GATCTGGGATTTCGGCATCTTGACCTCATTTGGACATaGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTG +
Preference number: 3 (lower is better)
Translates to: DLGFRHLDLIWT*KTSTYVAGWVL
Trigger: CAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAATCCCAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 72 bp GCGTGTGCTGGTTTCCAGCAGCTCTGGTTTGCGATATaGTTTCGTTTGCTGGCTGAAGATACAGAACCAGGG +
Preference number: 3 (lower is better)
Translates to: ACAGFQQLWFAI*FRLLAEDTEPG
Trigger: CCCTGGTTCTGTATCTTCAGCCAGCAAACGAAACCATATCGCAAACCAGAGCTGCTGGAAACCAGCACACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 72 bp GCATTAGTTAAACACCATTCCAAAGACATTTCTAAGTaGGCGACCCTTGCTCAGCTCCCCCACGCCCCATGC +
Preference number: 3 (lower is better)
Translates to: ALVKHHSKDISK*ATLAQLPHAPC
Trigger: GCATGGGGCGTGGGGGAGCTGAGCAAGGGTCGCTCACTTAGAAATGTCTTTGGAATGGTGTTTAACTAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CAA 90 bp TGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATGTGTCTGGACAAGTGTaGAGGCAGCGCGTCCACCAG +
Preference number: 3 (lower is better)
Translates to: CRLFHERNLLTLTWLFPNVSGQV*RQRVHQ
Trigger: CTGGTGGACGCGCTGCCTCAACACTTGTCCAGACAC...ATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAATAGCCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 72 bp TACCTGGGACACACGTGCACACATCCAGGTTCCATTTaGACCCATCAGGCTTTACTGTTTCAGCTGAAGTGT +
Preference number: 3 (lower is better)
Translates to: YLGHTCTHPGSI*THQALLFQLKC
Trigger: ACACTTCAGCTGAAACAGTAAAGCCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 72 bp GCGTCATCTTTTGCGTGTGCTGGTTTCCAGCAGCTCTaGTTTGCGATATGGTTTCGTTTGCTGGCTGAAGAT +
Preference number: 3 (lower is better)
Translates to: ASSFACAGFQQL*FAIWFRLLAED
Trigger: ATCTTCAGCCAGCAAACGAAACCATATCGCAAACCAGAGCTGCTGGAAACCAGCACACGCAAAAGATGACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CAA 90 bp AAGCCTTTGCCATCCAGAAATCAGACAGTTTTCCCACTGGTTTTAGATTCTTTAGGTGGGCACTGCCCATaGTCTGAAGGGGCCACAGCA +
Preference number: 3 (lower is better)
Translates to: KPLPSRNQTVFPLVLDSLGGHCP*SEGATA
Trigger: TGCTGTGGCCCCTTCAGACAATGGGCAGTGCCCACC...TAAAGAATCTAAAACCAGTGGGAAAACTGTCTGATTTCTGGATGGCAAAGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 72 bp CCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTaGCTGGGTCCTGTCAGAGAACATATTTTATCACCC +
Preference number: 3 (lower is better)
Translates to: PHLDMENLHLCG*LGPVREHILSP
Trigger: GGGTGATAAAATATGTTCTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 72 bp GGGAAGTGTGAAGTCAGATCTGGGATTTCGGCATCTTaGCCTCATTTGGACATGGAAAACCTCCACCTATGT +
Preference number: 3 (lower is better)
Translates to: GKCEVRSGISAS*PHLDMENLHLC
Trigger: ACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAATCCCAGATCTGACTTCACACTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR GCA 72 bp ACAACTTTAAAAGCATCACCTAGACGCGGGTTTAATTaGACTACAGTCCCATGGGTGAGGAGAGCTTTGCCA +
Preference number: 3 (lower is better)
Translates to: TTLKASPRRGFN*TTVPWVRRALP
Trigger: TGGCAAAGCTCTCCTCACCCATGGGACTGTAGTGCAATTAAACCCGCGTCTAGGTGATGCTTTTAAAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 72 bp ATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTaGGTCCTGTCAGAGAACATATTTTATCACCCTCCA +
Preference number: 3 (lower is better)
Translates to: IWTWKTSTYVAG*VLSENIFYHPP
Trigger: TGGAGGGTGATAAAATATGTTCTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 72 bp AGGCATATACTCCAGGCAACCACTATGACCAGCTGCTaGTCACAAGTAGAGAACTTGTTTCTTTTCACCCCT +
Preference number: 3 (lower is better)
Translates to: RHILQATTMTSC*SQVENLFLFTP
Trigger: AGGGGTGAAAAGAAACAAGTTCTCTACTTGTGATCAGCAGCTGGTCATAGTGGTTGCCTGGAGTATATGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CCA 72 bp TTGACCTCATTTGGACATGGAAAACCTCCACCTATGTaGCTGGCTGGGTCCTGTCAGAGAACATATTTTATC +
Preference number: 3 (lower is better)
Translates to: LTSFGHGKPPPM*LAGSCQRTYFI
Trigger: GATAAAATATGTTCTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR-3UTR CAA 90 bp TGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATCTTGTCCTATCACTTTaGAGTTTAGAAAGCCTTTGC +
Preference number: 3 (lower is better)
Translates to: CRLFHERNLLTLTWLFPNLVLSL*SLESLC
Trigger: GCAAAGGCTTTCTAAACTCAAAAGTGATAGGACAAG...ATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAATAGCCTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR TCA 72 bp ATCTCTGTATCGTTGCAATTTTTGTATACATGCTGCTaGAGGGCGCACTCCTCTTATTGTTGTATAGGTTTT +
Preference number: 3 (lower is better)
Translates to: ISVSLQFLYTCC*RAHSSYCCIGF
Trigger: AAAACCTATACAACAATAAGAGGAGTGCGCCCTTCAGCAGCATGTATACAAAAATTGCAACGATACAGAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp CTGTTTCAGCTGAAGTGTGCTCTCCAGGAGGCGGGCAGCCTGCGCCGTGTGTGGAGCCCGCAGGTCCCGTaGCCGCCCTGCCAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: LFQLKCALQEAGSLRRVWSPQVP*PPCQSS
Trigger: ACTTGACTGGCAGGGCGGTCACGGGACCTGCGGGCT...CCACACACGGCGCAGGCTGCCCGCCTCCTGGAGAGCACACTTCAGCTGAAACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CTGTTTCAGCTGAAGTGTGCTCTCCAGGAGGCGGGCAGCCTGCGCCGTGTGTGGCCCACACGGTCCTGGTaGTCAGCGCCAGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LFQLKCALQEAGSLRRVWPTRSW*SAPAGR
Trigger: CCTGCCAGCTGGCGCTGAGCACCAGGACCGTGTGGG...CCACACACGGCGCAGGCTGCCCGCCTCCTGGAGAGCACACTTCAGCTGAAACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CGCCACTGCTGCAGCAATCACGCCAGCCACGGGTGGAGGCTGTGGGTTCTGGAAGCAGAAGGCATGGGCTaGCACTCGGAGCCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: RHCCSNHASHGWRLWVLEAEGMG*HSEPAR
Trigger: GCGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGC...TTCCAGAACCCACAGCCTCCACCCGTGGCTGGCGTGATTGCTGCAGCAGTGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CGCCACTGCTGCAGCAATCACGCCAGCCACGGGTGGAGGCTGTGGGTTCTGGAACCGAAGAGCAGCAGCTaGCTCCGCCGGGGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: RHCCSNHASHGWRLWVLEPKSSS*LRRGLE
Trigger: CTCTAGCCCCCGGCGGAGCCAGCTGCTGCTCTTCGG...TTCCAGAACCCACAGCCTCCACCCGTGGCTGGCGTGATTGCTGCAGCAGTGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp AAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCCAGCCCGACACGCAGATGCCAGTaGGCGGGGTGGGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: KCQPIPRRRHGLPLGASPTRRCQ*AGWALP
Trigger: GGGCAGTGCCCACCCCGCCCACTGGCATCTGCGTGT...CGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CAA 72 bp CACGCAGATGCCAGTGGGCGGGGTGGGCACTGCCCATaGTCTGAAGGGGCCACAGCAGCCGTCCATAGAGGC +
Preference number: 4 (lower is better)
Translates to: HADASGRGGHCP*SEGATAAVHRG
Trigger: GCCTCTATGGACGGCTGCTGTGGCCCCTTCAGACAATGGGCAGTGCCCACCCCGCCCACTGGCATCTGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp GACCCTGGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCACTTCCCTCGCTCCATTaGGCAGCTCCCGCCCATGTG +
Preference number: 4 (lower is better)
Translates to: DPGGMAPRICWEASRGCALPSLH*AAPAHV
Trigger: CACATGGGCGGGAGCTGCTCAATGGAGCGAGGGAAG...TGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCCAGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp GACCCTGGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCACGGAGACCACCAAGCTaGGGATGCCATAGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: DPGGMAPRICWEASRGCARRPPS*GCHSRD
Trigger: GTCCCGGCTATGGCATCCTCAGCTTGGTGGTCTCCG...TGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCCAGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp ATGCCCCGCCCCCGCCGCTCCTTAAGCGCATCTGAGATGCCCTCTCCATTCTGCCAGTCGCCACTGTCCTaGGCTAGGAGGCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: MPRPRRSLSASEMPSPFCQSPLS*ARRRHC
Trigger: GCAGTGGCGCCTCCTAGCTCAGGACAGTGGCGACTG...GCAGAATGGAGAGGGCATCTCAGATGCGCTTAAGGAGCGGCGGGGGCGGGGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp ACCTGGCCAGAGGTGTCTGGACAAGTGTTGAGGCAGCGCGTCCACCAGGGAGTCTTCACGCTGGCGCGGTaGGGTCCTGCGCCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: TWPEVSGQVLRQRVHQGVFTLAR*GPAPPL
Trigger: AAGCGGAGGCGCAGGACCTCACCGCGCCAGCGTGAA...GACTCCCTGGTGGACGCGCTGCCTCAACACTTGTCCAGACACCTCTGGCCAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp TCAAGCCCGGCCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCCCGGGAACTTCACGCTaGCGCGGTGAGGTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: SSPASASWPERLAWNVLCPGTSR*RGEVLR
Trigger: GCGCAGGACCTCACCGCGCCAGCGTGAAGTTCCCGG...GCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGGCCGGGCTTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp CGCCACTGCTGCAGCAATCACGCCAGCCACGGGTGGAGGCTGTGGGTTCTGGAACTTCCCTCGCTCCATTaGGCAGCTCCCGCCCATGTG +
Preference number: 4 (lower is better)
Translates to: RHCCSNHASHGWRLWVLELPSLH*AAPAHV
Trigger: CACATGGGCGGGAGCTGCTCAATGGAGCGAGGGAAG...TTCCAGAACCCACAGCCTCCACCCGTGGCTGGCGTGATTGCTGCAGCAGTGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp CTGTTTCAGCTGAAGTGTGCTCTCCAGGAGGCGGGCAGCCTGCGCCGTGTGTGGCCAGGACAGGTCTGCTaGCGCACTCTCCCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: LFQLKCALQEAGSLRRVWPGQVC*RTLPVV
Trigger: CACCACAGGGAGAGTGCGTCAGCAGACCTGTCCTGG...CCACACACGGCGCAGGCTGCCCGCCTCCTGGAGAGCACACTTCAGCTGAAACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp ATGCCCCGCCCCCGCCGCTCCTTAAGCGCATCTGAGATGCCCTCTCCATTCTGCGCATGCCGATGCTGCTaGCCACCGCGATGTAGTCCC +
Preference number: 4 (lower is better)
Translates to: MPRPRRSLSASEMPSPFCACRCC*PPRCSP
Trigger: GGGACTACATCGCGGTGGGCAGCAGCATCGGCATGC...GCAGAATGGAGAGGGCATCTCAGATGCGCTTAAGGAGCGGCGGGGGCGGGGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp ATGCCCCGCCCCCGCCGCTCCTTAAGCGCATCTGAGATGCCCTCTCCATTCTGCGCATCTTCAAACTTCTaGCAGCGCAGCCCGGCGCCC +
Preference number: 4 (lower is better)
Translates to: MPRPRRSLSASEMPSPFCASSNF*QRSPAP
Trigger: GGGCGCCGGGCTGCGCTGGCAGAAGTTTGAAGATGC...GCAGAATGGAGAGGGCATCTCAGATGCGCTTAAGGAGCGGCGGGGGCGGGGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTGCATCTTCAAACTTCTaGCAGCGCAGCCCGGCGCCC +
Preference number: 4 (lower is better)
Translates to: GGMAPRICWEASRGCADPASSNF*QRSPAP
Trigger: GGGCGCCGGGCTGCGCTGGCAGAAGTTTGAAGATGC...AGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp AAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCCAGCCCGTACAGGAGGGCCCTCTaGTCTGTCAGCGCCCACACC +
Preference number: 4 (lower is better)
Translates to: KCQPIPRRRHGLPLGASPYRRAL*SVSAHT
Trigger: GGTGTGGGCGCTGACAGAGCAGAGGGCCCTCCTGTA...CGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTACAGGAGGGCCCTCTaGTCTGTCAGCGCCCACACC +
Preference number: 4 (lower is better)
Translates to: GGMAPRICWEASRGCADPYRRAL*SVSAHT
Trigger: GGTGTGGGCGCTGACAGAGCAGAGGGCCCTCCTGTA...AGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp GACCCTGGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCACTTCCGGACAGAAGCTaGTCACGCCCTCCCGGTACA +
Preference number: 4 (lower is better)
Translates to: DPGGMAPRICWEASRGCALPDRS*SRPPGT
Trigger: TGTACCGGGAGGGCGTGAGCAGCTTCTGTCCGGAAG...TGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCCAGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp GACCCTGGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCACGCTGCACAGGTCCTTaGTGCTCTGGCACAGCCACA +
Preference number: 4 (lower is better)
Translates to: DPGGMAPRICWEASRGCARCTGP*CSGTAT
Trigger: TGTGGCTGTGCCAGAGCAGCAAGGACCTGTGCAGCG...TGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCCAGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp TGGCACATGGTGTGTCCTGCTGCTGTGCTGGGCGTCATCTTTTGCGTGTGCTGGGGGCCCACACGGTCCTaGTGCTCAGCGCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: WHMVCPAAVLGVIFCVCWGPTRS*CSAPAG
Trigger: GCCAGCTGGCGCTGAGCACCAGGACCGTGTGGGCCC...CCAGCACACGCAAAAGATGACGCCCAGCACAGCAGCAGGACACACCATGTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp ACCTGGCCAGAGGTGTCTGGACAAGTGTTGAGGCAGCGCGTCCACCAGGGAGTCGCCTGGCTGCTCTTCTaGGTGCCGTGCGAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: TWPEVSGQVLRQRVHQGVAWLLF*VPCEWL
Trigger: CAGCCACTCGCACGGCACCCAGAAGAGCAGCCAGGC...GACTCCCTGGTGGACGCGCTGCCTCAACACTTGTCCAGACACCTCTGGCCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp ACCTGGCCAGAGGTGTCTGGACAAGTGTTGAGGCAGCGCGTCCACCAGGGAGTCCCTCAGGGTGGGGCATaGCGGCCTGGCTGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TWPEVSGQVLRQRVHQGVPQGGA*RPGCSS
Trigger: AGAAGAGCAGCCAGGCCGCCATGCCCCACCCTGAGG...GACTCCCTGGTGGACGCGCTGCCTCAACACTTGTCCAGACACCTCTGGCCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp ACCTGGCCAGAGGTGTCTGGACAAGTGTTGAGGCAGCGCGTCCACCAGGGAGTCCCGGCCTCAGCTTCCTaGCCAGAGCGTCTGGCATGG +
Preference number: 4 (lower is better)
Translates to: TWPEVSGQVLRQRVHQGVPASAS*PERLAW
Trigger: CCATGCCAGACGCTCTGGCCAGGAAGCTGAGGCCGG...GACTCCCTGGTGGACGCGCTGCCTCAACACTTGTCCAGACACCTCTGGCCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GACCCTGGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCACAGCTCCCGCCCATGTaGATGGTGACAGTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: DPGGMAPRICWEASRGCAQLPPM*MVTVWH
Trigger: ATGCCACACTGTCACCATGCACATGGGCGGGAGCTG...TGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCCAGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp CTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTGGAGGGCCGCGACTGTaGGCTCTGGGCGCTGACGCT +
Preference number: 4 (lower is better)
Translates to: LPAFAGRPLEAVQILFPSGGPRL*ALGADA
Trigger: AGCGTCAGCGCCCAGAGCGCACAGTCGCGGCCCTCC...ACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp GTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGCTCCCCCACGCCCCATaGACCCTCCTGTGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: VPTWDTRAHIQVPFAPIRLPHAP*TLLCRP
Trigger: GGGACGGCACAGGAGGGTGCATGGGGCGTGGGGGAG...CCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp AAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCCAGCCCGGGTTCTCCCTTGCACTaGCCTCGTGAGTGTCGGCTG +
Preference number: 4 (lower is better)
Translates to: KCQPIPRRRHGLPLGASPGSPLH*PRECRL
Trigger: CAGCCGACACTCACGAGGGCAGTGCAAGGGAGAACC...CGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp ACCTGGCCAGAGGTGTCTGGACAAGTGTTGAGGCAGCGCGTCCACCAGGGAGTCGGCTACCCTTGGTTCTaGGAGGCCTCCGGAGACCAC +
Preference number: 4 (lower is better)
Translates to: TWPEVSGQVLRQRVHQGVGYPWF*EASGDH
Trigger: GTGGTCTCCGGAGGCCTCCCAGAACCAAGGGTAGCC...GACTCCCTGGTGGACGCGCTGCCTCAACACTTGTCCAGACACCTCTGGCCAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp GGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTAGGCTTGGCTGGCACTaGAGCTGCTGGGACCAAAAC +
Preference number: 4 (lower is better)
Translates to: GGMAPRICWEASRGCADPRLGWH*SCWDQN
Trigger: GTTTTGGTCCCAGCAGCTTCAGTGCCAGCCAAGCCT...AGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp GTCCTGTCAGAGAACATATTTTATCACCCTCCACCTGCGGCCTGGGGGCTCCCTCGGGGTTCTTGTCTGTaGCGCCGTACCGCCGGGCGA +
Preference number: 4 (lower is better)
Translates to: VLSENIFYHPPPAAWGLPRGSCL*RRTAGR
Trigger: TCGCCCGGCGGTACGGCGTCACAGACAAGAACCCCG...AGGGAGCCCCCAGGCCGCAGGTGGAGGGTGATAAAATATGTTCTCTGACAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp AAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCCAGCCCGCTCGTGAGTGTCGGCTaGGGACACTTCTCACAGCTC +
Preference number: 4 (lower is better)
Translates to: KCQPIPRRRHGLPLGASPLVSVG*GHFSQL
Trigger: GAGCTGTGAGAAGTGTCCTCAGCCGACACTCACGAG...CGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTAGGGCTTCGTACCAGTaGCGCTTCCCCTTGATGGTG +
Preference number: 4 (lower is better)
Translates to: GGMAPRICWEASRGCADPRASYQ*RFPLMV
Trigger: CACCATCAAGGGGAAGCGGCACTGGTACGAAGCCCT...AGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp CCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGCTTGCTTCGGGAGGCAGCTaGACCGTGGAGGGCCGCGAC +
Preference number: 4 (lower is better)
Translates to: PTWDTRAHIQVPFAPIRLASGGS*TVEGRD
Trigger: GTCGCGGCCCTCCACGGTGCAGCTGCCTCCCGAAGC...AAGCCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GTCCTGTCAGAGAACATATTTTATCACCCTCCACCTGCGGCCTGGGGGCTCCCTGCATGGCGGCCTGGCTaGTCTTCTGGGTGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: VLSENIFYHPPPAAWGLPAWRPG*SSGCRA
Trigger: CGCACGGCACCCAGAAGAGCAGCCAGGCCGCCATGC...AGGGAGCCCCCAGGCCGCAGGTGGAGGGTGATAAAATATGTTCTCTGACAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGGGGCGGGGTGGGCACTaGCCATTGTCTGAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: VPTWDTRAHIQVPFAPIRGRGGH*PLSEGA
Trigger: GGCCCCTTCAGACAATGGGCAGTGCCCACCCCGCCC...CCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp AGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTTCCAGCGGGAGCCTGTTCCCTaGGCAACGGGGCCGGCACCG +
Preference number: 4 (lower is better)
Translates to: SEEASNSTGLQFYRAGFQREPVP*ATGPAP
Trigger: CGGTGCCGGCCCCGTTGCCCAGGGAACAGGCTCCCG...CTGGAAGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp AAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCCAGCCCGTCCTCCAACACCAGCTaGGAGTTACAGAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: KCQPIPRRRHGLPLGASPSSNTS*ELQSPW
Trigger: CCAGGGGCTCTGTAACTCCCAGCTGGTGTTGGAGGA...CGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp ATGCCCCGCCCCCGCCGCTCCTTAAGCGCATCTGAGATGCCCTCTCCATTCTGCTCGTCTCAGAAACTGTaGCCCCTGGCAGCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: MPRPRRSLSASEMPSPFCSSQKL*PLAASP
Trigger: CGGAGAAGCTGCCAGGGGCCACAGTTTCTGAGACGA...GCAGAATGGAGAGGGCATCTCAGATGCGCTTAAGGAGCGGCGGGGGCGGGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTCGTCTCAGAAACTGTaGCCCCTGGCAGCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: GGMAPRICWEASRGCADPSSQKL*PLAASP
Trigger: CGGAGAAGCTGCCAGGGGCCACAGTTTCTGAGACGA...AGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp AAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCCAGCCCGCAATGTCTGATCCCGTaGAGGCTGCTCAAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: KCQPIPRRRHGLPLGASPQCLIP*RLLKPG
Trigger: CCCTGGCTTGAGCAGCCTCCACGGGATCAGACATTG...CGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp ATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCGCGACTGTGCGCTCTaGGCGCTGACGCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: MAPRICWEASRGCADPFSRDCAL*ALTLHR
Trigger: CCTGTGCAGCGTCAGCGCCCAGAGCGCACAGTCGCG...GGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp CGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGGAGGCAGCTGCACCGTaGAGGGCCGCGACTGTGCGC +
Preference number: 4 (lower is better)
Translates to: RICWEASRGCADPFSQYQEAAAP*RAATVR
Trigger: GCGCACAGTCGCGGCCCTCCACGGTGCAGCTGCCTC...CTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp GACCCTGGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCATTTACAGCTCCTAGCTaGGAGAGGTCCAGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: DPGGMAPRICWEASRGCAFTAPS*ERSSLV
Trigger: GACCAGGCTGGACCTCTCCCAGCTAGGAGCTGTAAA...TGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCCAGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp CCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCAGCTTTGTCTGTAGGGCGGCGCCAATaGGGGGCTCCCAAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PQLPGQSVWHGMCSAALSVGRRQ*GAPKLL
Trigger: GAGCAGCTTGGGAGCCCCCCATTGGCGCCGCCCTAC...AGACAAAGCTGCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CAA 72 bp GCGGGTCCAACCTGGCCAGAGGTGTCTGGACAAGTGTaGAGGCAGCGCGTCCACCAGGGAGTCACTCTGAAG +
Preference number: 4 (lower is better)
Translates to: AGPTWPEVSGQV*RQRVHQGVTLK
Trigger: CTTCAGAGTGACTCCCTGGTGGACGCGCTGCCTCAACACTTGTCCAGACACCTCTGGCCAGGTTGGACCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp CCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCAGCTTTGTCTCGCTGTCGGTGGAGTTaGGCGAGCTGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PQLPGQSVWHGMCSAALSRCRWS*ASCSCS
Trigger: GGAGCAGGAGCAGCTCGCTCAACTCCACCGACAGCG...AGACAAAGCTGCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp GACCCTGGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCACGCCCATGTGCATGGTaGCAGTGTGGCATTTCAGTT +
Preference number: 4 (lower is better)
Translates to: DPGGMAPRICWEASRGCARPCAW*QCGISV
Trigger: AACTGAAATGCCACACTGTCACCATGCACATGGGCG...TGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCCAGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp CCCTTGCAGGGCTCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGCAGGCATCTCCTCGGTaGTCCCGGTCCGCACGTGCA +
Preference number: 4 (lower is better)
Translates to: PLQGSGEKHIGHSHGHLWQASPR*SRSARA
Trigger: TGCACGTGCGGACCGGGATCACCGAGGAGATGCCTG...CCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGAGCCCTGCAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp TCAAGCCCGGCCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCTGCCGTGCGAGTGGCTaGACGTCTTTGTCAGCCGTT +
Preference number: 4 (lower is better)
Translates to: SSPASASWPERLAWNVLCCRASG*TSLSAV
Trigger: AACGGCTGACAAAGACGTTCAGCCACTCGCACGGCA...GCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGGCCGGGCTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp AAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCCAGCCCGAGGTGTGCTGTGGTGTaGGGTGAGGTGTGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: KCQPIPRRRHGLPLGASPRCAVV*GEVCCV
Trigger: CACACAACACACCTCACCTCACACCACAGCACACCT...CGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTGGATGCCTGCCCCTCTaGGGCTGCAGGCGAGGACAG +
Preference number: 4 (lower is better)
Translates to: GTVRRHQTAQVCSSTELAGCLPL*GCRRGQ
Trigger: CTGTCCTCGCCTGCAGCCTCAGAGGGGCAGGCATCC...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp TCAAGCCCGGCCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCGATAGAGCATGCCGATaGTGCTGCCCACCGCGATGT +
Preference number: 4 (lower is better)
Translates to: SSPASASWPERLAWNVLCDRACR*CCPPRC
Trigger: ACATCGCGGTGGGCAGCAGCATCGGCATGCTCTATC...GCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGGCCGGGCTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp AACCTGTCAAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCCCTGCCAGAGGCTGTaGCTGCTGCCACCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: NLSSVNPYPAEGMGCHSEPCQRL*LLPPGH
Trigger: ATGACCTGGTGGCAGCAGGCACAGCCTCTGGCAGGG...CTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTTGACAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCGCCCGGCAACGCGCTaGAGAACAGGCCGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: AWLPAFAGRPLEAVQILFRPATR*RTGRLC
Trigger: ACAAAGGCGGCCTGTTCTGCAGCGCGTTGCCGGGCG...AAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp GACCCTGGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAACGCTCAGACCTGTCTaGAAGTATAGGTCCCCACTG +
Preference number: 4 (lower is better)
Translates to: DPGGMAPRICWEASRGCATLRPV*KYRSPL
Trigger: CAGTGGGGACCTATACTTGCAGACAGGTCTGAGCGT...TGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCCAGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp AAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCCAGCCCGCATGCGCAGCTTATCTaGCACCTTTTCTACGGGGGC +
Preference number: 4 (lower is better)
Translates to: KCQPIPRRRHGLPLGASPHAQLI*HLFYGG
Trigger: GCCCCCGTAGAAAAGGTGGCAGATAAGCTGCGCATG...CGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCAGCTTTGTCTTCCAGCCTGGTCCAGTaGATGCCCGTGGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PQLPGQSVWHGMCSAALSSSLVQ*MPVGQL
Trigger: GAGCTGCCCCACGGGCATGCACTGGACCAGGCTGGA...AGACAAAGCTGCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CTGTGCCGTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCTGCAACCCTGGCACATaGTCCCAGGCGGTCCCCACA +
Preference number: 4 (lower is better)
Translates to: LCRPYLGHTCTHPGSICTCNPGT*SQAVPT
Trigger: TGTGGGGACCGCCTGGGAGCATGTGCCAGGGTTGCA...GGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGACGGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CGCCACTGCTGCAGCAATCACGCCAGCCACGGGTGGAGGCTGTGGGTTCTGGAACTCTTCTGGGTGCCGTaGGAGTGGCTGAACGTCTTT +
Preference number: 4 (lower is better)
Translates to: RHCCSNHASHGWRLWVLELFWVP*EWLNVF
Trigger: AAAGACGTTCAGCCACTCGCACGGCACCCAGAAGAG...TTCCAGAACCCACAGCCTCCACCCGTGGCTGGCGTGATTGCTGCAGCAGTGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGTGCGGTGCGGTGCAGTaGGGTGTGGGGTGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: VPTWDTRAHIQVPFAPIRCGAVQ*GVGCGV
Trigger: CACACCACACCCCACACCGCACTGCACCGCACCGCA...CCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp AAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCCAGCCCGCATGGTGTGTCCTGCTaGTGTGCTGGGCGTCATCTT +
Preference number: 4 (lower is better)
Translates to: KCQPIPRRRHGLPLGASPHGVSC*CAGRHL
Trigger: AAGATGACGCCCAGCACAGCAGCAGGACACACCATG...CGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp AAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCCAGCCCGGGCTTCCAGTCCCAGTaGTGTGTGACCTTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: KCQPIPRRRHGLPLGASPGFQSQ*CVTLSK
Trigger: CTTGCTCAAGGTCACACAGCACTGGGACTGGAAGCC...CGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GTCCTGTCAGAGAACATATTTTATCACCCTCCACCTGCGGCCTGGGGGCTCCCTCCTCTGCTTCCGGGGTaGTGGGGGTTTGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: VLSENIFYHPPPAAWGLPPLLPG*WGFGPV
Trigger: CACTGGCCCAAACCCCCAGCACCCCGGAAGCAGAGG...AGGGAGCCCCCAGGCCGCAGGTGGAGGGTGATAAAATATGTTCTCTGACAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTTCATCTAGGGAAACCTaGGGGCTCCCGCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: AWLPAFAGRPLEAVQILFSSRET*GLPRQP
Trigger: GGGCTGCCGCGGGAGCCCCCAGGTTTCCCTAGATGA...AAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp AAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCCAGCCCGTGCAACTTCCACTGTTaGGGGATTCCAGACGCGGGT +
Preference number: 4 (lower is better)
Translates to: KCQPIPRRRHGLPLGASPCNFHC*GIPDAG
Trigger: ACCCGCGTCTGGAATCCCCCAACAGTGGAAGTTGCA...CGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTGCAACTTCCACTGTTaGGGGATTCCAGACGCGGGT +
Preference number: 4 (lower is better)
Translates to: GGMAPRICWEASRGCADPCNFHC*GIPDAG
Trigger: ACCCGCGTCTGGAATCCCCCAACAGTGGAAGTTGCA...AGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp GACCCTGGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCACCAGCAACTGTGGCCTaGTTGACTGTGTCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: DPGGMAPRICWEASRGCAPATVA*LTVSRR
Trigger: TCTCCTAGACACAGTCAACCAGGCCACAGTTGCTGG...TGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCCAGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp GCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTTGCTCCTTGGCTCGCTaGCCACGGAGCTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: AWLPAFAGRPLEAVQILFCSLAR*PRSWPW
Trigger: CCATGGCCAGCTCCGTGGCCAGCGAGCCAAGGAGCA...AAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp TGGCACATGGTGTGTCCTGCTGCTGTGCTGGGCGTCATCTTTTGCGTGTGCTGGAGGATGTCCTGCTCTTaGCTGGGCTCCACGGGGCTG +
Preference number: 4 (lower is better)
Translates to: WHMVCPAAVLGVIFCVCWRMSCS*LGSTGL
Trigger: CAGCCCCGTGGAGCCCAGCCAAGAGCAGGACATCCT...CCAGCACACGCAAAAGATGACGCCCAGCACAGCAGCAGGACACACCATGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CTGTTTCAGCTGAAGTGTGCTCTCCAGGAGGCGGGCAGCCTGCGCCGTGTGTGGTTCTGCAAACTGATCTaGCTTGAGCAGCCCGGCGTC +
Preference number: 4 (lower is better)
Translates to: LFQLKCALQEAGSLRRVWFCKLI*LEQPGV
Trigger: GACGCCGGGCTGCTCAAGCCAGATCAGTTTGCAGAA...CCACACACGGCGCAGGCTGCCCGCCTCCTGGAGAGCACACTTCAGCTGAAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CTGTTTCAGCTGAAGTGTGCTCTCCAGGAGGCGGGCAGCCTGCGCCGTGTGTGGAGGTCCTTGCTGCTCTaGCACAGCCACAGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: LFQLKCALQEAGSLRRVWRSLLL*HSHRKL
Trigger: AAGCTTCCTGTGGCTGTGCCAGAGCAGCAAGGACCT...CCACACACGGCGCAGGCTGCCCGCCTCCTGGAGAGCACACTTCAGCTGAAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTCGCGACTGTGCGCTCTaGGCGCTGACGCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: GTVRRHQTAQVCSSTELARDCAL*ALTLHR
Trigger: CCTGTGCAGCGTCAGCGCCCAGAGCGCACAGTCGCG...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGGAGGCAGCTGCACCGTaGAGGGCCGCGACTGTGCGC +
Preference number: 4 (lower is better)
Translates to: LIWTWKTSTYVAGWVLSEEAAAP*RAATVR
Trigger: GCGCACAGTCGCGGCCCTCCACGGTGCAGCTGCCTC...CTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTGGGAGAGGTCCAGCCTaGTCCAGTGCATGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: AWLPAFAGRPLEAVQILFGRGPA*SSACPW
Trigger: CCACGGGCATGCACTGGACCAGGCTGGACCTCTCCC...AAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp CCCTTGCAGGGCTCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGGCGAGGTCTCCGTTTaGACAGCGGGCCCACACGGT +
Preference number: 4 (lower is better)
Translates to: PLQGSGEKHIGHSHGHLWGEVSV*TAGPHG
Trigger: ACCGTGTGGGCCCGCTGTCCAAACGGAGACCTCGCC...CCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGAGCCCTGCAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp TCAAGCCCGGCCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCCAGGACGGCAGCACGTaGGTAATCGGAGTGCATGCA +
Preference number: 4 (lower is better)
Translates to: SSPASASWPERLAWNVLCQDGST*VIGVHA
Trigger: TGCATGCACTCCGATTACCCACGTGCTGCCGTCCTG...GCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGGCCGGGCTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CAGCTCTGGAGCGGCCATTCCCCCATAACAGCCACTTGGGCAAACCGGTGTGTACTGCTTCCGGGGTGCTaGGGGTTTGGGCCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: QLWSGHSPITATWANRCVLLPGC*GFGPVF
Trigger: GAACACTGGCCCAAACCCCCAGCACCCCGGAAGCAG...TACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATGGCCGCTCCAGAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp CTGTTTCAGCTGAAGTGTGCTCTCCAGGAGGCGGGCAGCCTGCGCCGTGTGTGGACTTCCTCATCTGGTTaGGGTGCCGGCAGTACAGAT +
Preference number: 4 (lower is better)
Translates to: LFQLKCALQEAGSLRRVWTSSSG*GAGSTD
Trigger: ATCTGTACTGCCGGCACCTCAACCAGATGAGGAAGT...CCACACACGGCGCAGGCTGCCCGCCTCCTGGAGAGCACACTTCAGCTGAAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp CGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCGCTGTCGGTGGAGTTaGGCGAGCTGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RICWEASRGCADPFSQYQRCRWS*ASCSCS
Trigger: GGAGCAGGAGCAGCTCGCTCAACTCCACCGACAGCG...CTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp CTGTTTCAGCTGAAGTGTGCTCTCCAGGAGGCGGGCAGCCTGCGCCGTGTGTGGCGCCCATGTGCATGGTaGCAGTGTGGCATTTCAGTT +
Preference number: 4 (lower is better)
Translates to: LFQLKCALQEAGSLRRVWRPCAW*QCGISV
Trigger: AACTGAAATGCCACACTGTCACCATGCACATGGGCG...CCACACACGGCGCAGGCTGCCCGCCTCCTGGAGAGCACACTTCAGCTGAAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp TGGCACATGGTGTGTCCTGCTGCTGTGCTGGGCGTCATCTTTTGCGTGTGCTGGGCCAGAGATTTGTGCTaGGGTGGCCAGAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: WHMVCPAAVLGVIFCVCWARDLC*GGQRPP
Trigger: TGGAGGCCTCTGGCCACCTCAGCACAAATCTCTGGC...CCAGCACACGCAAAAGATGACGCCCAGCACAGCAGCAGGACACACCATGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp GACCCTGGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAACACCACATAGTCCGTaGTGCTCACTTGCCACCAAT +
Preference number: 4 (lower is better)
Translates to: DPGGMAPRICWEASRGCATPHSP*CSLATN
Trigger: ATTGGTGGCAAGTGAGCATCACGGACTATGTGGTGT...TGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCCAGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp AACCTGTCAAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCAGGGCTCCTTCAGATaGCCTCCCACTCGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: NLSSVNPYPAEGMGCHSEQGSFR*PPTRPP
Trigger: TGGAGGACGAGTGGGAGGTCATCTGAAGGAGCCCTG...CTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTTGACAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp AACCTGTCAAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGGGAGCTATCTGTGGATaGGACCAGGACGGCAGCACG +
Preference number: 4 (lower is better)
Translates to: NLSSVNPYPAEGMGCHSEGAICG*DQDGST
Trigger: CGTGCTGCCGTCCTGGTCTCATCCACAGATAGCTCC...CTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTTGACAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp GTCCTGTCAGAGAACATATTTTATCACCCTCCACCTGCGGCCTGGGGGCTCCCTGCACTGCCCATTGTCTaGAGGGGCCACAGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: VLSENIFYHPPPAAWGLPALPIV*RGHSSR
Trigger: ACGGCTGCTGTGGCCCCTTCAGACAATGGGCAGTGC...AGGGAGCCCCCAGGCCGCAGGTGGAGGGTGATAAAATATGTTCTCTGACAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp CCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAGGCCAGGAGCTTTGCCATCCGTaGGGCGCCGGGCAAGGCACA +
Preference number: 4 (lower is better)
Translates to: PITATWANRCVFQHQPGQELCHP*GAGQGT
Trigger: TGTGCCTTGCCCGGCGCCTCACGGATGGCAAAGCTC...CTGGCCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp CGCCACTGCTGCAGCAATCACGCCAGCCACGGGTGGAGGCTGTGGGTTCTGGAATCCAGGCAACCACTATaGCCAGCTGCTGATCACAAG +
Preference number: 4 (lower is better)
Translates to: RHCCSNHASHGWRLWVLESRQPL*PAADHK
Trigger: CTTGTGATCAGCAGCTGGTCATAGTGGTTGCCTGGA...TTCCAGAACCCACAGCCTCCACCCGTGGCTGGCGTGATTGCTGCAGCAGTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCTGCCAGAGGCTGTaGCTGCTGCCACCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: AWLPAFAGRPLEAVQILFPCQRL*LLPPGH
Trigger: ATGACCTGGTGGCAGCAGGCACAGCCTCTGGCAGGG...AAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp GACCCTGGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATTCCAGACGCGGGTaGAGTTCAAAAGGCTTGACT +
Preference number: 4 (lower is better)
Translates to: DPGGMAPRICWEASRGCADSRRG*SSKGLT
Trigger: AGTCAAGCCTTTTGAACTGCACCCGCGTCTGGAATC...TGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCCAGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp ATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCAGCCGGCTCAGGTCCTaGTGGGAGCAACTAGGTCCG +
Preference number: 4 (lower is better)
Translates to: MAPRICWEASRGCADPFSSRLRS*WEQLGP
Trigger: CGGACCTAGTTGCTCCCAGCAGGACCTGAGCCGGCT...GGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp TCAAGCCCGGCCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCGGCGAGACTGCCACCTaGTGGACAGCATCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: SSPASASWPERLAWNVLCGETAT*WTASSN
Trigger: GTTTGAAGATGCTGTCCAGCAGGTGGCAGTCTCGCC...GCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGGCCGGGCTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGCAGGGCCACAAACACTaGCTGGGGCAGGGCTTCGTA +
Preference number: 4 (lower is better)
Translates to: APRICWEASRGCADPFSQQGHKH*LGQGFV
Trigger: TACGAAGCCCTGCCCCAGGCAGTGTTTGTGGCCCTG...CTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp GACCCTGGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCATCCGTGATGCTCACTTaGCACCAATGGTCGTCATCT +
Preference number: 4 (lower is better)
Translates to: DPGGMAPRICWEASRGCASVMLT*HQWSSS
Trigger: AGATGACGACCATTGGTGGCAAGTGAGCATCACGGA...TGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCCAGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp GCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTTACGGGGGCTTGGGCTaGTGTGGCCACCGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: AWLPAFAGRPLEAVQILFYGGLG*CGHRVS
Trigger: ACTCACTCGGTGGCCACAGCAGCCCAAGCCCCCGTA...AAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp TGGCACATGGTGTGTCCTGCTGCTGTGCTGGGCGTCATCTTTTGCGTGTGCTGGCGCTGCACAGGTCCTTaGTGCTCTGGCACAGCCACA +
Preference number: 4 (lower is better)
Translates to: WHMVCPAAVLGVIFCVCWRCTGP*CSGTAT
Trigger: TGTGGCTGTGCCAGAGCAGCAAGGACCTGTGCAGCG...CCAGCACACGCAAAAGATGACGCCCAGCACAGCAGCAGGACACACCATGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGGCCTGGTCCAGTGCATaGCCGTGGGGCAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: RICWEASRGCADPFSQYQAWSSA*PWGSSW
Trigger: CCAAGAGCTGCCCCACGGGCATGCACTGGACCAGGC...CTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp TGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACTCCAGCCTGGTCCAGTaGATGCCCGTGGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: WEASRGCADPFSQYQHPHSSLVQ*MPVGQL
Trigger: GAGCTGCCCCACGGGCATGCACTGGACCAGGCTGGA...GTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTGCCAGCTGGCAGGCCTaGAACCCTGGCACATGCTCC +
Preference number: 4 (lower is better)
Translates to: GTVRRHQTAQVCSSTELAASWQA*NPGTCS
Trigger: GGAGCATGTGCCAGGGTTGCAGGCCTGCCAGCTGGC...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CTGTTTCAGCTGAAGTGTGCTCTCCAGGAGGCGGGCAGCCTGCGCCGTGTGTGGTGCGAGTCATCCTTGTaGAGGGGCCATGCTAATCTC +
Preference number: 4 (lower is better)
Translates to: LFQLKCALQEAGSLRRVWCESSL*RGHANL
Trigger: GAGATTAGCATGGCCCCTGCACAAGGATGACTCGCA...CCACACACGGCGCAGGCTGCCCGCCTCCTGGAGAGCACACTTCAGCTGAAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CGCCACTGCTGCAGCAATCACGCCAGCCACGGGTGGAGGCTGTGGGTTCTGGAATGCGCCTCCGCTTCCTaGACACACGTGCTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: RHCCSNHASHGWRLWVLECASAS*THVLLN
Trigger: ATTAAGAAGCACGTGTGTGCAGGAAGCGGAGGCGCA...TTCCAGAACCCACAGCCTCCACCCGTGGCTGGCGTGATTGCTGCAGCAGTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp AGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTTCCAGGGCGCGGTGAGGTCCTaGGCCTCCGCTTCCTGCACA +
Preference number: 4 (lower is better)
Translates to: SEEASNSTGLQFYRAGFQGAVRS*ASASCT
Trigger: TGTGCAGGAAGCGGAGGCGCAGGACCTCACCGCGCC...CTGGAAGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CTGTTTCAGCTGAAGTGTGCTCTCCAGGAGGCGGGCAGCCTGCGCCGTGTGTGGCTGCACAATGGAAGATaGCTCCTCCAACACCAGCTG +
Preference number: 4 (lower is better)
Translates to: LFQLKCALQEAGSLRRVWLHNGR*LLQHQL
Trigger: CAGCTGGTGTTGGAGGAGCCATCTTCCATTGTGCAG...CCACACACGGCGCAGGCTGCCCGCCTCCTGGAGAGCACACTTCAGCTGAAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp ACCTGGCCAGAGGTGTCTGGACAAGTGTTGAGGCAGCGCGTCCACCAGGGAGTCTGGGGGCCAATGGGTTaGATGTCTTCCCCATCATGC +
Preference number: 4 (lower is better)
Translates to: TWPEVSGQVLRQRVHQGVWGPMG*MSSPSC
Trigger: GCATGATGGGGAAGACATCCAACCCATTGGCCCCCA...GACTCCCTGGTGGACGCGCTGCCTCAACACTTGTCCAGACACCTCTGGCCAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CTGTGCCGTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCGCCACAAACACTGCCTaGGGCAGGGCTTCGTACCAG +
Preference number: 4 (lower is better)
Translates to: LCRPYLGHTCTHPGSICTATNTA*GRASYQ
Trigger: CTGGTACGAAGCCCTGCCCCAGGCAGTGTTTGTGGC...GGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGACGGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCAGCTTTGTCTGTGGTGGGGCTGGGCTaGCAGGTTCTCCCTTGCACT +
Preference number: 4 (lower is better)
Translates to: PQLPGQSVWHGMCSAALSVVGLG*QVLPCT
Trigger: AGTGCAAGGGAGAACCTGCCAGCCCAGCCCCACCAC...AGACAAAGCTGCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GACCCTGGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGCTTACCTGGACAGGTaGCTCAATCATTATCCAGGC +
Preference number: 4 (lower is better)
Translates to: DPGGMAPRICWEASRGCAAYLDR*LNHYPG
Trigger: GCCTGGATAATGATTGAGCCACCTGTCCAGGTAAGC...TGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCCAGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp GGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTCGTTCACTTCACCATTaGAGCTGCTTTCCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: GGMAPRICWEASRGCADPRSLHH*SCFPGL
Trigger: CAGACCAGGAAAGCAGCTTCAATGGTGAAGTGAACG...AGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp GTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGGGCTGGAAGGCACAGTaGGTGAGTTCAGGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: VPTWDTRAHIQVPFAPIRGWKAQ*VSSGGG
Trigger: TCCCCCTCCTGAACTCACTCACTGTGCCTTCCAGCC...CCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp ATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCGGCTGGAAGGCACAGTaGGTGAGTTCAGGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: MAPRICWEASRGCADPFSGWKAQ*VSSGGG
Trigger: TCCCCCTCCTGAACTCACTCACTGTGCCTTCCAGCC...GGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp GCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTTCAAGCCAGGGCTTGTaGGTGCTGGCTGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: AWLPAFAGRPLEAVQILFSSQGL*VLAAKA
Trigger: TGCCTTGGCAGCCAGCACTCACAAGCCCTGGCTTGA...AAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp GCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGCTGGACGTCAATGTCTaGTCCCGTGGAGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: APRICWEASRGCADPFSQLDVNV*SRGGCS
Trigger: TGAGCAGCCTCCACGGGATCAGACATTGACGTCCAG...CTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTCGGAGACCACCAAGCTaGGGATGCCATAGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: GTVRRHQTAQVCSSTELARRPPS*GCHSRD
Trigger: GTCCCGGCTATGGCATCCTCAGCTTGGTGGTCTCCG...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp ATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCGCCCAGAGAGTCTGCTaGTCCCCGAGCGTTATGCAG +
Preference number: 4 (lower is better)
Translates to: MAPRICWEASRGCADPFSAQRVC*SPSVMQ
Trigger: CTGCATAACGCTCGGGGATCAGCAGACTCTCTGGGC...GGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp CTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGACCAGGGAGTCACTCTaGAGCCCCTGTGCCCGCCAC +
Preference number: 4 (lower is better)
Translates to: LIWTWKTSTYVAGWVLSETRESL*SPCARH
Trigger: GTGGCGGGCACAGGGGCTTCAGAGTGACTCCCTGGT...CTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp GTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGCTTGCACTGCCCTCGTaGGTGTCGGCTGAGGACACT +
Preference number: 4 (lower is better)
Translates to: VPTWDTRAHIQVPFAPIRLALPS*VSAEDT
Trigger: AGTGTCCTCAGCCGACACTCACGAGGGCAGTGCAAG...CCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp CCCTTGCAGGGCTCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGTCACACACAGCTCCATaGGGAGGCAGCCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: PLQGSGEKHIGHSHGHLWSHTAP*GGSPGP
Trigger: AGGTCCAGGGCTGCCTCCTCATGGAGCTGTGTGTGA...CCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGAGCCCTGCAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp ACCTGGCCAGAGGTGTCTGGACAAGTGTTGAGGCAGCGCGTCCACCAGGGAGTCCCTAGGACTTGTTCTTaGGGACAGAAGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TWPEVSGQVLRQRVHQGVPRTCS*GQKWRW
Trigger: CCACCTCCACTTCTGTCCTCAAGAACAAGTCCTAGG...GACTCCCTGGTGGACGCGCTGCCTCAACACTTGTCCAGACACCTCTGGCCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CAGCTCTGGAGCGGCCATTCCCCCATAACAGCCACTTGGGCAAACCGGTGTGTAAGAGCATGCCGATGCTaGTGCCCACCGCGATGTAGT +
Preference number: 4 (lower is better)
Translates to: QLWSGHSPITATWANRCVRACRC*CPPRCS
Trigger: ACTACATCGCGGTGGGCAGCAGCATCGGCATGCTCT...TACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATGGCCGCTCCAGAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGGCCAGAGGCTGTGCCTaGTGCCACCAGGTCATCAAA +
Preference number: 4 (lower is better)
Translates to: APRICWEASRGCADPFSQARGCA*CHQVIK
Trigger: TTTGATGACCTGGTGGCAGCAGGCACAGCCTCTGGC...CTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp TGGCACATGGTGTGTCCTGCTGCTGTGCTGGGCGTCATCTTTTGCGTGTGCTGGAGCTTCTCCGCTTGCTaGACGTGGACACGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: WHMVCPAAVLGVIFCVCWSFSAC*TWTRSE
Trigger: CTCAGAGCGTGTCCACGTGCAGCAAGCGGAGAAGCT...CCAGCACACGCAAAAGATGACGCCCAGCACAGCAGCAGGACACACCATGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp ATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCGGCAGCTTCTCCGCTTaGTGCACGTGGACACGCTCT +
Preference number: 4 (lower is better)
Translates to: MAPRICWEASRGCADPFSGSFSA*CTWTRS
Trigger: AGAGCGTGTCCACGTGCAGCAAGCGGAGAAGCTGCC...GGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp AACCTGTCAAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCAGCTCCCGCCCATGTaGATGGTGACAGTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: NLSSVNPYPAEGMGCHSEQLPPM*MVTVWH
Trigger: ATGCCACACTGTCACCATGCACATGGGCGGGAGCTG...CTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTTGACAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp AAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCCAGCCCGATTTGGTCCATCATCTaGAGGACACGGCTCATCTCC +
Preference number: 4 (lower is better)
Translates to: KCQPIPRRRHGLPLGASPIWSII*RTRLIS
Trigger: GGAGATGAGCCGTGTCCTGCAGATGATGGACCAAAT...CGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp AACCTGTCAAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGAGGGCTTCGTACCAGTaGCGCTTCCCCTTGATGGTG +
Preference number: 4 (lower is better)
Translates to: NLSSVNPYPAEGMGCHSERASYQ*RFPLMV
Trigger: CACCATCAAGGGGAAGCGGCACTGGTACGAAGCCCT...CTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTTGACAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp ACCTGGCCAGAGGTGTCTGGACAAGTGTTGAGGCAGCGCGTCCACCAGGGAGTCACGCTCAGACCTGTCTaGAAGTATAGGTCCCCACTG +
Preference number: 4 (lower is better)
Translates to: TWPEVSGQVLRQRVHQGVTLRPV*KYRSPL
Trigger: CAGTGGGGACCTATACTTGCAGACAGGTCTGAGCGT...GACTCCCTGGTGGACGCGCTGCCTCAACACTTGTCCAGACACCTCTGGCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGCTTCCGGACAGAAGCTaGTCACGCCCTCCCGGTACA +
Preference number: 4 (lower is better)
Translates to: VPTWDTRAHIQVPFAPIRLPDRS*SRPPGT
Trigger: TGTACCGGGAGGGCGTGAGCAGCTTCTGTCCGGAAG...CCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp TCAAGCCCGGCCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCATGTCACACTTCCACTaGTCGCCTTCCGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: SSPASASWPERLAWNVLCMSHFH*SPSGQK
Trigger: CTTCTGTCCGGAAGGCGAGCAGTGGAAGTGTGACAT...GCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGGCCGGGCTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGGCCTGGTCCAGTGCATaGCCGTGGGGCAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LIWTWKTSTYVAGWVLSEAWSSA*PWGSSW
Trigger: CCAAGAGCTGCCCCACGGGCATGCACTGGACCAGGC...CTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCAGCTTTGTCTATCCCGGTCCGCACGTaGACGTTCCACCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: PQLPGQSVWHGMCSAALSIPVRT*TFHLLS
Trigger: TGACAGCAGGTGGAACGTGCACGTGCGGACCGGGAT...AGACAAAGCTGCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGCTTAGGAGGCGCCACTGCTaGAGCAATCACGCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PTWDTRAHIQVPFAPIRLRRRHC*SNHASH
Trigger: GTGGCTGGCGTGATTGCTGCAGCAGTGGCGCCTCCT...AAGCCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGCTTGCTAGGAGGCGCCACTaGTGCAGCAATCACGCCAGC +
Preference number: 4 (lower is better)
Translates to: PTWDTRAHIQVPFAPIRLARRRH*CSNHAS
Trigger: GCTGGCGTGATTGCTGCAGCAGTGGCGCCTCCTAGC...AAGCCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGGAGCACATCCCGCGCTaGAGAGAGCTGACCTTTGGC +
Preference number: 4 (lower is better)
Translates to: VPTWDTRAHIQVPFAPIREHIPR*RELTFG
Trigger: GCCAAAGGTCAGCTCTCTGCAGCGCGGGATGTGCTC...CCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp AAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCCAGCCCGTACCTGGGACACACGTaGACACATCCAGGTTCCATT +
Preference number: 4 (lower is better)
Translates to: KCQPIPRRRHGLPLGASPYLGHT*THPGSI
Trigger: AATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTA...CGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTCCATGCACCCTCCTGTaGCGTCCCTACCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: GTVRRHQTAQVCSSTELAPCTLL*RPYLGH
Trigger: GTGTCCCAGGTAGGGACGGCACAGGAGGGTGCATGG...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CCCTTGCAGGGCTCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGTGCAGGCGAGGACAGTaGAGGCTCAGGACAAACCCG +
Preference number: 4 (lower is better)
Translates to: PLQGSGEKHIGHSHGHLWCRRGQ*RLRTNP
Trigger: CGGGTTTGTCCTGAGCCTGCACTGTCCTCGCCTGCA...CCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGAGCCCTGCAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp TCAAGCCCGGCCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCAATGAGACTTCCCCTTaGAGGGCTCTGGTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SSPASASWPERLAWNVLCNETSP*RALVRS
Trigger: GCTTCTCACCAGAGCCCTGCAAGGGGAAGTCTCATT...GCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGGCCGGGCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp TCAAGCCCGGCCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCTCGCCGAGGCTGGAGTaGAGTGGTGTGATCATAGTT +
Preference number: 4 (lower is better)
Translates to: SSPASASWPERLAWNVLCSPRLE*SGVIIV
Trigger: AACTATGATCACACCACTGCACTCCAGCCTCGGCGA...GCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGGCCGGGCTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTCTCCCATCTCACCTCTaGTTCCGGGGTGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GTVRRHQTAQVCSSTELALPSHL*FRGAGG
Trigger: ACCCCCAGCACCCCGGAAGCAGAGGTGAGATGGGAG...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CCCTTGCAGGGCTCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTGGAGGTGGCGAGATaGAAGGCCTACGTACGGACC +
Preference number: 4 (lower is better)
Translates to: PLQGSGEKHIGHSHGHLWVEVAR*KAYVRT
Trigger: GGTCCGTACGTAGGCCTTGCATCTCGCCACCTCCAC...CCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGAGCCCTGCAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CGCCACTGCTGCAGCAATCACGCCAGCCACGGGTGGAGGCTGTGGGTTCTGGAAGAGCGGAAACCCTTCTaGATCTTTGTCGGAATGGCA +
Preference number: 4 (lower is better)
Translates to: RHCCSNHASHGWRLWVLEERKPF*IFVGMA
Trigger: TGCCATTCCGACAAAGATCCAGAAGGGTTTCCGCTC...TTCCAGAACCCACAGCCTCCACCCGTGGCTGGCGTGATTGCTGCAGCAGTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGCTTCGGCTCAGGTCCTGCTaGGAGCAACTAGGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: PTWDTRAHIQVPFAPIRLRLRSC*EQLGPS
Trigger: GCTCGGACCTAGTTGCTCCCAGCAGGACCTGAGCCG...AAGCCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CGCCACTGCTGCAGCAATCACGCCAGCCACGGGTGGAGGCTGTGGGTTCTGGAAGAGACTGCCACCTGCTaGACAGCATCTTCAAACTTC +
Preference number: 4 (lower is better)
Translates to: RHCCSNHASHGWRLWVLEETATC*TASSNF
Trigger: GAAGTTTGAAGATGCTGTCCAGCAGGTGGCAGTCTC...TTCCAGAACCCACAGCCTCCACCCGTGGCTGGCGTGATTGCTGCAGCAGTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTGCCACAAACACTGCCTaGGGCAGGGCTTCGTACCAG +
Preference number: 4 (lower is better)
Translates to: LPAFAGRPLEAVQILFPSATNTA*GRASYQ
Trigger: CTGGTACGAAGCCCTGCCCCAGGCAGTGTTTGTGGC...ACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp GCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCACCTTTACGGCTCTaGCACAAGGGCGATCCACGC +
Preference number: 4 (lower is better)
Translates to: AWLPAFAGRPLEAVQILFPPLRL*HKGDPR
Trigger: GCGTGGATCGCCCTTGTGCCAGAGCCGTAAAGGTGG...AAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp CCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAGGCCAGGTCCTGATGAACACCTaGCCGAGGCTGTCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PITATWANRCVFQHQPGQVLMNT*PRLSSA
Trigger: GGCGCTGGACAGCCTCGGCCAGGTGTTCATCAGGAC...CTGGCCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGGTCCTGATGAACACCTaGCCGAGGCTGTCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: RICWEASRGCADPFSQYQVLMNT*PRLSSA
Trigger: GGCGCTGGACAGCCTCGGCCAGGTGTTCATCAGGAC...CTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp CAGCTCTGGAGCGGCCATTCCCCCATAACAGCCACTTGGGCAAACCGGTGTGTAGGCGGGCTGGACAGGTaGCTCAATCATTATCCAGGC +
Preference number: 4 (lower is better)
Translates to: QLWSGHSPITATWANRCVGGLDR*LNHYPG
Trigger: GCCTGGATAATGATTGAGCCACCTGTCCAGCCCGCC...TACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATGGCCGCTCCAGAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp TGGCACATGGTGTGTCCTGCTGCTGTGCTGGGCGTCATCTTTTGCGTGTGCTGGTGTGCGGGTCCAACCTaGCCAGAGGTGTCTGGACAA +
Preference number: 4 (lower is better)
Translates to: WHMVCPAAVLGVIFCVCWCAGPT*PEVSGQ
Trigger: TTGTCCAGACACCTCTGGCCAGGTTGGACCCGCACA...CCAGCACACGCAAAAGATGACGCCCAGCACAGCAGCAGGACACACCATGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp AACCTGTCAAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCACGGGTGGAGGCTGTaGGTTCTGGAACGAGACAGA +
Preference number: 4 (lower is better)
Translates to: NLSSVNPYPAEGMGCHSEHGWRL*VLERDR
Trigger: TCTGTCTCGTTCCAGAACCCACAGCCTCCACCCGTG...CTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTTGACAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAGGCCAGCACGCCAGCCACGGGTaGAGGCTGTGGGTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: PITATWANRCVFQHQPGQHASHG*RLWVLE
Trigger: TTCCAGAACCCACAGCCTCCACCCGTGGCTGGCGTG...CTGGCCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp TTTCGGCATCTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCAGGGGGCGGGATGTGTaGCAGGGCGGCCTAGCCCTC +
Preference number: 4 (lower is better)
Translates to: FRHLDLIWTWKTSTYVAGRGRDV*QGGLAL
Trigger: GAGGGCTAGGCCGCCCTGCCACACATCCCGCCCCCT...GCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAGGCCAGTCCCTGTGGTGGGGCTaGGCTGGCAGGTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PITATWANRCVFQHQPGQSLWWG*AGRFSL
Trigger: AAGGGAGAACCTGCCAGCCCAGCCCCACCACAGGGA...CTGGCCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGGGGTACAGCCAGCTCTaGAGCGGCCATTCCCCCATA +
Preference number: 4 (lower is better)
Translates to: VPTWDTRAHIQVPFAPIRGYSQL*SGHSPI
Trigger: TATGGGGGAATGGCCGCTCCAGAGCTGGCTGTACCC...CCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp ATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCACGTGGACACGCTCTaGGCATCCAGACATCTCCAG +
Preference number: 4 (lower is better)
Translates to: MAPRICWEASRGCADPFSHVDTL*ASRHLQ
Trigger: CTGGAGATGTCTGGATGCTCAGAGCGTGTCCACGTG...GGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp GCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGGACTCTGCACTTAACTaGTCCACGCTACTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: APRICWEASRGCADPFSQDSALN*STLLPR
Trigger: CCTGGGCAGTAGCGTGGATCAGTTAAGTGCAGAGTC...CTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp TGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACGCCAGAGATTTGTGCTaGGGTGGCCAGAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: WEASRGCADPFSQYQHPHARDLC*GGQRPP
Trigger: TGGAGGCCTCTGGCCACCTCAGCACAAATCTCTGGC...GTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp CCCTTGCAGGGCTCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGCTGGACGTCAATGTCTaGTCCCGTGGAGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PLQGSGEKHIGHSHGHLWLDVNV*SRGGCS
Trigger: TGAGCAGCCTCCACGGGATCAGACATTGACGTCCAG...CCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGAGCCCTGCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp GTCCTGTCAGAGAACATATTTTATCACCCTCCACCTGCGGCCTGGGGGCTCCCTAGGCTTGGCTGGCACTaGAGCTGCTGGGACCAAAAC +
Preference number: 4 (lower is better)
Translates to: VLSENIFYHPPPAAWGLPRLGWH*SCWDQN
Trigger: GTTTTGGTCCCAGCAGCTTCAGTGCCAGCCAAGCCT...AGGGAGCCCCCAGGCCGCAGGTGGAGGGTGATAAAATATGTTCTCTGACAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp TTTCGGCATCTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCGTGCGCTCTGGGCGCTaGCGCTGCACAGGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: FRHLDLIWTWKTSTYVAGVRSGR*RCTGPC
Trigger: GCAAGGACCTGTGCAGCGTCAGCGCCCAGAGCGCAC...GCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp ATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCAGAGCATGCCGATGCTaGTGCCCACCGCGATGTAGT +
Preference number: 4 (lower is better)
Translates to: MAPRICWEASRGCADPFSRACRC*CPPRCS
Trigger: ACTACATCGCGGTGGGCAGCAGCATCGGCATGCTCT...GGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp CTGTGCCGTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCAGTACAGATAGAGCATaGCGATGCTGCTGCCCACCG +
Preference number: 4 (lower is better)
Translates to: LCRPYLGHTCTHPGSICTSTDRA*RCCCPP
Trigger: CGGTGGGCAGCAGCATCGGCATGCTCTATCTGTACT...GGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGACGGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp AACCTGTCAAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGGCCTCTCAGGTAAGCTaGAACTTCCACTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: NLSSVNPYPAEGMGCHSEASQVS*NFHCWG
Trigger: CCCCCAACAGTGGAAGTTGCAGCTTACCTGAGAGGC...CTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTTGACAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTGGCAGCTTCTCCGCTTaGTGCACGTGGACACGCTCT +
Preference number: 4 (lower is better)
Translates to: GTVRRHQTAQVCSSTELAGSFSA*CTWTRS
Trigger: AGAGCGTGTCCACGTGCAGCAAGCGGAGAAGCTGCC...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGGGCGAGACTGCCACCTaGTGGACAGCATCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: APRICWEASRGCADPFSQGETAT*WTASSN
Trigger: GTTTGAAGATGCTGTCCAGCAGGTGGCAGTCTCGCC...CTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTCAGGGCCACAAACACTaGCTGGGGCAGGGCTTCGTA +
Preference number: 4 (lower is better)
Translates to: GTVRRHQTAQVCSSTELAQGHKH*LGQGFV
Trigger: TACGAAGCCCTGCCCCAGGCAGTGTTTGTGGCCCTG...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGCGTGCACGTTCCACCTaGTGTCAAGCACCCACAGCA +
Preference number: 4 (lower is better)
Translates to: VPTWDTRAHIQVPFAPIRRARST*CQAPTA
Trigger: TGCTGTGGGTGCTTGACAGCAGGTGGAACGTGCACG...CCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGCTTTGCCAGTCAAGTCTGTaGGGGGATGCCTGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PTWDTRAHIQVPFAPIRLCQSSL*GDACPS
Trigger: AGAGGGGCAGGCATCCCCGCACAGACTTGACTGGCA...AAGCCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp ACCTGGCCAGAGGTGTCTGGACAAGTGTTGAGGCAGCGCGTCCACCAGGGAGTCAGCTGGGACTATAACTaGACATCACTGTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TWPEVSGQVLRQRVHQGVSWDYN*TSLCPA
Trigger: TGCTGGGCACAGTGATGTGCAGTTATAGTCCCAGCT...GACTCCCTGGTGGACGCGCTGCCTCAACACTTGTCCAGACACCTCTGGCCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CTGTTTCAGCTGAAGTGTGCTCTCCAGGAGGCGGGCAGCCTGCGCCGTGTGTGGGAGTTACAGAGCCCCTaGTCTAGATCCAGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LFQLKCALQEAGSLRRVWELQSP*SRSREE
Trigger: TTCTTCTCTGGATCTAGACCAGGGGCTCTGTAACTC...CCACACACGGCGCAGGCTGCCCGCCTCCTGGAGAGCACACTTCAGCTGAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTTCCTCCAACACCAGCTaGGAGTTACAGAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: AWLPAFAGRPLEAVQILFSSNTS*ELQSPW
Trigger: CCAGGGGCTCTGTAACTCCCAGCTGGTGTTGGAGGA...AAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp GCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTTCCGCTTGCTGCACGTaGACACGCTCTGAGCATCCA +
Preference number: 4 (lower is better)
Translates to: AWLPAFAGRPLEAVQILFSACCT*TRSEHP
Trigger: TGGATGCTCAGAGCGTGTCCACGTGCAGCAAGCGGA...AAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp GGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTGAGCTGTCCTGTTCTTaGAAGGGTAACTGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: GGMAPRICWEASRGCADPELSCS*KGNCVL
Trigger: TAGCACACAGTTACCCTTCCAAGAACAGGACAGCTC...AGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp GCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTGGGGGCCAATGGGTTaGATGTCTTCCCCATCATGC +
Preference number: 4 (lower is better)
Translates to: APRICWEASRGCADPFSQWGPMG*MSSPSC
Trigger: GCATGATGGGGAAGACATCCAACCCATTGGCCCCCA...CTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp CAGCTCTGGAGCGGCCATTCCCCCATAACAGCCACTTGGGCAAACCGGTGTGTAAGATTTGTGCTGAGGTaGCCAGAGGCCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: QLWSGHSPITATWANRCVRFVLR*PEASML
Trigger: CAGCATGGAGGCCTCTGGCCACCTCAGCACAAATCT...TACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATGGCCGCTCCAGAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGAGATTTGTGCTGAGGTaGCCAGAGGCCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: APRICWEASRGCADPFSQRFVLR*PEASML
Trigger: CAGCATGGAGGCCTCTGGCCACCTCAGCACAAATCT...CTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp GCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCAATGTCTGATCCCGTaGAGGCTGCTCAAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: AWLPAFAGRPLEAVQILFQCLIP*RLLKPG
Trigger: CCCTGGCTTGAGCAGCCTCCACGGGATCAGACATTG...AAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp TGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACTTTTCTACGGGGGCTTaGGCTGCTGTGGCCACCGAG +
Preference number: 4 (lower is better)
Translates to: WEASRGCADPFSQYQHPHFSTGA*AAVATE
Trigger: CTCGGTGGCCACAGCAGCCCAAGCCCCCGTAGAAAA...GTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp CGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGGACCCCGAGAAGGCTTaGCTGGCACTGAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RICWEASRGCADPFSQYQDPEKA*LALKLL
Trigger: CAGCAGCTTCAGTGCCAGCCAAGCCTTCTCGGGGTC...CTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp TCAAGCCCGGCCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCCTTCCCTTAGCGACGTaGAATTCATTCTTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: SSPASASWPERLAWNVLCLPLAT*NSFLPE
Trigger: CTCGGGCAAGAATGAATTCCACGTCGCTAAGGGAAG...GCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGGCCGGGCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp TGGCACATGGTGTGTCCTGCTGCTGTGCTGGGCGTCATCTTTTGCGTGTGCTGGTTTACAGCTCCTAGCTaGGAGAGGTCCAGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: WHMVCPAAVLGVIFCVCWFTAPS*ERSSLV
Trigger: GACCAGGCTGGACCTCTCCCAGCTAGGAGCTGTAAA...CCAGCACACGCAAAAGATGACGCCCAGCACAGCAGCAGGACACACCATGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAGGCCAGCTGACCCCGGCGGGCTaGACAGGTGGCTCAATCATT +
Preference number: 4 (lower is better)
Translates to: PITATWANRCVFQHQPGQLTPAG*TGGSII
Trigger: AATGATTGAGCCACCTGTCCAGCCCGCCGGGGTCAG...CTGGCCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CCCTTGCAGGGCTCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGCTGGGGCTACTAATGTaGAAGGAGGCCCTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: PLQGSGEKHIGHSHGHLWLGLLM*KEALGQ
Trigger: TTGGCCCAGGGCCTCCTTCCACATTAGTAGCCCCAG...CCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGAGCCCTGCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAGGCCAGCGGTGCAGTGCGGTGTaGGGTGTGGTGTGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: PITATWANRCVFQHQPGQRCSAV*GVVCCV
Trigger: CACACAACACACCACACCCCACACCGCACTGCACCG...CTGGCCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CAGCTCTGGAGCGGCCATTCCCCCATAACAGCCACTTGGGCAAACCGGTGTGTAAAACCTCCACCTATGTaGCTGGCTGGGTCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: QLWSGHSPITATWANRCVKPPPM*LAGSCQ
Trigger: CTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTT...TACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATGGCCGCTCCAGAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGCCTCAGAGGCTACCATaGGGTACAGCCAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: VPTWDTRAHIQVPFAPIRPQRLP*GTASSG
Trigger: TCCAGAGCTGGCTGTACCCCATGGTAGCCTCTGAGG...CCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGGCTCCCCGCATTTGCTaGGAGGCCTCTAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: RICWEASRGCADPFSQYQAPRIC*EASRGC
Trigger: ACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGC...CTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
3UTR CAA 72 bp CCAGCTCTGGAGCGGCCATTCCCCCATAACAGCCACTaGGGCAAACCGGTGTGTATTTCAACACCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PALERPFPHNSH*GKPVCISTPAR
Trigger: CCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATGGCCGCTCCAGAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTCACGTGGACACGCTCTaGGCATCCAGACATCTCCAG +
Preference number: 4 (lower is better)
Translates to: GTVRRHQTAQVCSSTELAHVDTL*ASRHLQ
Trigger: CTGGAGATGTCTGGATGCTCAGAGCGTGTCCACGTG...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp CTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTCCATGGAAGAGCCTCTaGGCCTCGTCTCAGAAACTG +
Preference number: 4 (lower is better)
Translates to: LPAFAGRPLEAVQILFPSPWKSL*ASSQKL
Trigger: CAGTTTCTGAGACGAGGCTCAGAGGCTCTTCCATGG...ACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp CCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAGGCCAGCATCTCCGAGTCCCGTaGCATCACTGCCTCCCACAT +
Preference number: 4 (lower is better)
Translates to: PITATWANRCVFQHQPGQHLRVP*HHCLPH
Trigger: ATGTGGGAGGCAGTGATGTCACGGGACTCGGAGATG...CTGGCCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp TGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACCATCTCCGAGTCCCGTaGCATCACTGCCTCCCACAT +
Preference number: 4 (lower is better)
Translates to: WEASRGCADPFSQYQHPHHLRVP*HHCLPH
Trigger: ATGTGGGAGGCAGTGATGTCACGGGACTCGGAGATG...GTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp AGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTTCCAGTCAAGCCAGGGCTTGTaGGTGCTGGCTGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: SEEASNSTGLQFYRAGFQSSQGL*VLAAKA
Trigger: TGCCTTGGCAGCCAGCACTCACAAGCCCTGGCTTGA...CTGGAAGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp AGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTTCCAGGCCCAGAGAGTCTGCTaGTCCCCGAGCGTTATGCAG +
Preference number: 4 (lower is better)
Translates to: SEEASNSTGLQFYRAGFQAQRVC*SPSVMQ
Trigger: CTGCATAACGCTCGGGGATCAGCAGACTCTCTGGGC...CTGGAAGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp GAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTAGTGCGCTCTGGGCGCTaGCGCTGCACAGGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: EAVQILFPSTSILTVSVLVRSGR*RCTGPC
Trigger: GCAAGGACCTGTGCAGCGTCAGCGCCCAGAGCGCAC...TAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp GTCCTGTCAGAGAACATATTTTATCACCCTCCACCTGCGGCCTGGGGGCTCCCTGCTCTTCACACGGCCTaGGGTTTCTTGCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: VLSENIFYHPPPAAWGLPALHTA*GFLLRS
Trigger: TGACCTCAGCAAGAAACCTCAGGCCGTGTGAAGAGC...AGGGAGCCCCCAGGCCGCAGGTGGAGGGTGATAAAATATGTTCTCTGACAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp AAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCCAGCCCGATCCCAGTGGGGATTTaGACTGAAATCAAGCTACAC +
Preference number: 4 (lower is better)
Translates to: KCQPIPRRRHGLPLGASPIPVGI*TEIKLH
Trigger: GTGTAGCTTGATTTCAGTTCAAATCCCCACTGGGAT...CGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp ATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATGCATGCCGATGCTGCTaGCCACCGCGATGTAGTCCC +
Preference number: 4 (lower is better)
Translates to: ICWEASRGCADPFSQYQHACRCC*PPRCSP
Trigger: GGGACTACATCGCGGTGGGCAGCAGCATCGGCATGC...ATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp CTGTTTCAGCTGAAGTGTGCTCTCCAGGAGGCGGGCAGCCTGCGCCGTGTGTGGTACAAGTTGAAAAACTaGAACCCTGCCAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LFQLKCALQEAGSLRRVWYKLKN*NPARGC
Trigger: ACAGCCTCTGGCAGGGTTGCAGTTTTTCAACTTGTA...CCACACACGGCGCAGGCTGCCCGCCTCCTGGAGAGCACACTTCAGCTGAAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGATGTCTTCCCCATCATaGGCCCCAGGAGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: RICWEASRGCADPFSQYQMSSPS*APGELS
Trigger: GGACAGCTCTCCTGGGGCGCATGATGGGGAAGACAT...CTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp ACCTGGCCAGAGGTGTCTGGACAAGTGTTGAGGCAGCGCGTCCACCAGGGAGTCTCATCAGTGACAGCATaGCAGAGATTTGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TWPEVSGQVLRQRVHQGVSSVTA*QRFVLR
Trigger: CCTCAGCACAAATCTCTGGCATGCTGTCACTGATGA...GACTCCCTGGTGGACGCGCTGCCTCAACACTTGTCCAGACACCTCTGGCCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CCCTTGCAGGGCTCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGGGACCAAAACGCCATaGGCAGCTTATCTGCCACCT +
Preference number: 4 (lower is better)
Translates to: PLQGSGEKHIGHSHGHLWGTKTP*AAYLPP
Trigger: AGGTGGCAGATAAGCTGCGCATGGCGTTTTGGTCCC...CCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGAGCCCTGCAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTGGGACCAAAACGCCATaGGCAGCTTATCTGCCACCT +
Preference number: 4 (lower is better)
Translates to: AWLPAFAGRPLEAVQILFGTKTP*AAYLPP
Trigger: AGGTGGCAGATAAGCTGCGCATGGCGTTTTGGTCCC...AAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp GCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACTGAAGAGGCTTCGGGAGGCAGCTaGACCGTGGAGGGCCGCGAC +
Preference number: 4 (lower is better)
Translates to: ADPFSQYQHPHSFCLTEEASGGS*TVEGRD
Trigger: GTCGCGGCCCTCCACGGTGCAGCTGCCTCCCGAAGC...CTCTTCAGTAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp CTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGCTGGGCCAAACCAGCTaGCCGGCTACCCTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: LIWTWKTSTYVAGWVLSELGQTS*PATLGS
Trigger: AGAACCAAGGGTAGCCGGGCAGCTGGTTTGGCCCAG...CTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAGGCCAGGTTTCAGCTGAAGTGTaGTCTCCAGGAGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: PITATWANRCVFQHQPGQVSAEV*SPGGGQ
Trigger: CTGCCCGCCTCCTGGAGAGCACACTTCAGCTGAAAC...CTGGCCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp TCAAGCCCGGCCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCCCAGCAGCTCTGGTTTaGGATATGGTTTCGTTTGCT +
Preference number: 4 (lower is better)
Translates to: SSPASASWPERLAWNVLCPAALV*DMVSFA
Trigger: AGCAAACGAAACCATATCGCAAACCAGAGCTGCTGG...GCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGGCCGGGCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp TGGCACATGGTGTGTCCTGCTGCTGTGCTGGGCGTCATCTTTTGCGTGTGCTGGCTGGGCGTCATCTTTTaGGTGTGCTGGTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: WHMVCPAAVLGVIFCVCWLGVIF*VCWFPA
Trigger: TGCTGGAAACCAGCACACGCAAAAGATGACGCCCAG...CCAGCACACGCAAAAGATGACGCCCAGCACAGCAGCAGGACACACCATGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTATGCCCTCTCCATTCTaGTCCCTCCCTGTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: GTVRRHQTAQVCSSTELAMPSPF*SLPVGL
Trigger: AAGGCCCACAGGGAGGGAGCAGAATGGAGAGGGCAT...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CGCCACTGCTGCAGCAATCACGCCAGCCACGGGTGGAGGCTGTGGGTTCTGGAAAACTGCACATCACTGTaGCCAGCAGCATTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: RHCCSNHASHGWRLWVLENCTSL*PAAFLY
Trigger: ATACAGAAATGCTGCTGGGCACAGTGATGTGCAGTT...TTCCAGAACCCACAGCCTCCACCCGTGGCTGGCGTGATTGCTGCAGCAGTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp TCAAGCCCGGCCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCAATCCAGCTGCACAATaGAAGATGGCTCCTCCAACA +
Preference number: 4 (lower is better)
Translates to: SSPASASWPERLAWNVLCNPAAQ*KMAPPT
Trigger: TGTTGGAGGAGCCATCTTCCATTGTGCAGCTGGATT...GCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGGCCGGGCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp ATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATTGTCCTGCTCTTGGCTaGGCTCCACGGGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: ICWEASRGCADPFSQYQHCPALG*APRGCL
Trigger: AAGGCAGCCCCGTGGAGCCCAGCCAAGAGCAGGACA...ATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp ATCCCGAATTCCAGTTGTGATGTTGATGAACGAGAGTGTGTAGACCCTGGGGGCAGGATGTCCTGCTCTTaGCTGGGCTCCACGGGGCTG +
Preference number: 4 (lower is better)
Translates to: IPNSSCDVDERECVDPGGRMSCS*LGSTGL
Trigger: CAGCCCCGTGGAGCCCAGCCAAGAGCAGGACATCCT...GCCCCCAGGGTCTACACACTCTCGTTCATCAACATCACAACTGGAATTCGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp AGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTTCCAGAGGGCTTGTGAGTGCTaGCTGCCAAGGCAGAGACCG +
Preference number: 4 (lower is better)
Translates to: SEEASNSTGLQFYRAGFQRACEC*LPRQRP
Trigger: CGGTCTCTGCCTTGGCAGCCAGCACTCACAAGCCCT...CTGGAAGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCTCACTTGCCACCAATaGTCGTCATCTCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: AWLPAFAGRPLEAVQILFLTCHQ*SSSPWG
Trigger: GCCCCAAGGAGATGACGACCATTGGTGGCAAGTGAG...AAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp CTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGTTTTCTACGGGGGCTTaGGCTGCTGTGGCCACCGAG +
Preference number: 4 (lower is better)
Translates to: LIWTWKTSTYVAGWVLSEFSTGA*AAVATE
Trigger: CTCGGTGGCCACAGCAGCCCAAGCCCCCGTAGAAAA...CTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp TTTCGGCATCTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCGGGAGAGGTCCAGCCTaGTCCAGTGCATGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: FRHLDLIWTWKTSTYVAGGRGPA*SSACPW
Trigger: CCACGGGCATGCACTGGACCAGGCTGGACCTCTCCC...GCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CTTCTCACAGCTCAGGCACCACACTCGGCCAGGTTTGGAAAAAGTCTAGTTTATTGGGGCATGGCGGCCTaGCTGCTCTTCTGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: LLTAQAPHSARFGKSLVYWGMAA*LLFWVP
Trigger: CGGCACCCAGAAGAGCAGCCAGGCCGCCATGCCCCA...ATAAACTAGACTTTTTCCAAACCTGGCCGAGTGTGGTGCCTGAGCTGTGAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTCTGGCCAGAGGTGTCTaGACAAGTGTTGAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GTVRRHQTAQVCSSTELALARGV*TSVEAA
Trigger: CGCTGCCTCAACACTTGTCCAGACACCTCTGGCCAG...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp TTTCGGCATCTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCCTGCCCGGCTACCCTTaGTTCTGGGAGGCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: FRHLDLIWTWKTSTYVAGLPGYP*FWEASG
Trigger: TCCGGAGGCCTCCCAGAACCAAGGGTAGCCGGGCAG...GCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CATTCCCCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAATGAGGAGGCAGCCCTaGACCTCACCCCACAGCGTC +
Preference number: 4 (lower is better)
Translates to: HSPITATWANRCVFQHQPMRRQP*TSPHSV
Trigger: GACGCTGTGGGGTGAGGTCCAGGGCTGCCTCCTCAT...TGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp TGGCACATGGTGTGTCCTGCTGCTGTGCTGGGCGTCATCTTTTGCGTGTGCTGGGCTGAGGTCATTTCCTaGCACATGGTGTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: WHMVCPAAVLGVIFCVCWAEVIS*HMVCPA
Trigger: AGCAGGACACACCATGTGCCAGGAAATGACCTCAGC...CCAGCACACGCAAAAGATGACGCCCAGCACAGCAGCAGGACACACCATGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGCTTGGACAGAAGTGGAGGTaGCGAGATGCAAGGCCTACG +
Preference number: 4 (lower is better)
Translates to: PTWDTRAHIQVPFAPIRLGQKWR*RDARPT
Trigger: CGTAGGCCTTGCATCTCGCCACCTCCACTTCTGTCC...AAGCCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CAA 72 bp CATGGTGTGTCCTGCTGCTGTGCTGGGCGTCATCTTTaGCGTGTGCTGGTTTCCAGCAGCTCTGGTTTGCGA +
Preference number: 4 (lower is better)
Translates to: HGVSCCCAGRHL*RVLVSSSSGLR
Trigger: TCGCAAACCAGAGCTGCTGGAAACCAGCACACGCAAAAGATGACGCCCAGCACAGCAGCAGGACACACCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp GACCCTGGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCATTTTGTGAATACCAGTaGCATCAAATCTCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: DPGGMAPRICWEASRGCAFCEYQ*HQISEA
Trigger: AGCTTCGGAGATTTGATGTCACTGGTATTCACAAAA...TGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCCAGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTCCATGGAAGAGCCTCTaGGCCTCGTCTCAGAAACTG +
Preference number: 4 (lower is better)
Translates to: GTVRRHQTAQVCSSTELAPWKSL*ASSQKL
Trigger: CAGTTTCTGAGACGAGGCTCAGAGGCTCTTCCATGG...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp CCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGCTTGACTCTGCACTTAACTaGTCCACGCTACTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PTWDTRAHIQVPFAPIRLDSALN*STLLPR
Trigger: CCTGGGCAGTAGCGTGGATCAGTTAAGTGCAGAGTC...AAGCCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp ATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCAAACTGATCTGGCTTaGGCAGCCCGGCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ICWEASRGCADPFSQYQHQTDLA*AARRPL
Trigger: CAGAGGACGCCGGGCTGCTCAAGCCAGATCAGTTTG...ATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp CGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCAGCTTTCTGCAAACTaGTCTGGCTTGAGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: RICWEASRGCADPFSQYQQLSAN*SGLSSP
Trigger: CGGGCTGCTCAAGCCAGATCAGTTTGCAGAAAGCTG...CTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp AACCTGTCAAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGACACCACATAGTCCGTaGTGCTCACTTGCCACCAAT +
Preference number: 4 (lower is better)
Translates to: NLSSVNPYPAEGMGCHSETPHSP*CSLATN
Trigger: ATTGGTGGCAAGTGAGCATCACGGACTATGTGGTGT...CTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTTGACAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp TGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGACACCGCTGTTATTaGCCCCGAGAAGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: WEASRGCADPFSQYQHPHRHRCY*PREGLA
Trigger: AGCCAAGCCTTCTCGGGGTCAATAACAGCGGTGTCT...GTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp CCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCAGCTTTGTCTCAGGCCCAGATGTGCTaGTTTCCACATGCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: PQLPGQSVWHGMCSAALSQAQMC*FPHAKL
Trigger: AAGCTTGGCATGTGGAAATCAGCACATCTGGGCCTG...AGACAAAGCTGCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp CCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCAGCTTTGTCTAGCCCACAGCTCATCTaGCGCAGTCACTGTGAAACA +
Preference number: 4 (lower is better)
Translates to: PQLPGQSVWHGMCSAALSSPQLI*RSHCET
Trigger: TGTTTCACAGTGACTGCGTCAGATGAGCTGTGGGCT...AGACAAAGCTGCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp CTGTGCCGTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCTTTACTGTTTCAGCTaGAGTGTGCTCTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LCRPYLGHTCTHPGSICTLYCFS*SVLSRR
Trigger: CCTCCTGGAGAGCACACTTCAGCTGAAACAGTAAAG...GGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGACGGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGAGAGGCTGTGCCTGCTaGCACCAGGTCATCAAAGCA +
Preference number: 4 (lower is better)
Translates to: RICWEASRGCADPFSQYQRGCAC*HQVIKA
Trigger: TGCTTTGATGACCTGGTGGCAGCAGGCACAGCCTCT...CTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp CTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACTGATCCACGCTACTaGCCAGGACACTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LPAFAGRPLEAVQILFPSTDPRY*PGHLRS
Trigger: TGACCTCAAGTGTCCTGGGCAGTAGCGTGGATCAGT...ACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp TTTCGGCATCTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCAGCCGGCTCAGGTCCTaGTGGGAGCAACTAGGTCCG +
Preference number: 4 (lower is better)
Translates to: FRHLDLIWTWKTSTYVAGSRLRS*WEQLGP
Trigger: CGGACCTAGTTGCTCCCAGCAGGACCTGAGCCGGCT...GCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTCGTCTGAAATAAGCTaGACTGGTCAAACACCACAT +
Preference number: 4 (lower is better)
Translates to: GGMAPRICWEASRGCADPSSEIS*TGQTPH
Trigger: ATGTGGTGTTTGACCAGTGCAGCTTATTTCAGACGA...AGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp CCCTTGCAGGGCTCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGTTCCTTCGTGGGAGCTaGAGAAGCCAACACAAAGGC +
Preference number: 4 (lower is better)
Translates to: PLQGSGEKHIGHSHGHLWFLRGS*RSQHKG
Trigger: GCCTTTGTGTTGGCTTCTGCAGCTCCCACGAAGGAA...CCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGAGCCCTGCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp ATGCCCCGCCCCCGCCGCTCCTTAAGCGCATCTGAGATGCCCTCTCCATTCTGCAACATTATTCCTCCCTaGCTGCCCCAACAAAACAAT +
Preference number: 4 (lower is better)
Translates to: MPRPRRSLSASEMPSPFCNIIPP*LPQQNN
Trigger: ATTGTTTTGTTGGGGCAGGCAGGGAGGAATAATGTT...GCAGAATGGAGAGGGCATCTCAGATGCGCTTAAGGAGCGGCGGGGGCGGGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CTGTGCCGTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCGGCCAGTGTTCCTTCTaGTTTTGTGAAGGGCCCTTA +
Preference number: 4 (lower is better)
Translates to: LCRPYLGHTCTHPGSICTGQCSF*FCEGPL
Trigger: TAAGGGCCCTTCACAAAAGCAGAAGGAACACTGGCC...GGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGACGGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp AAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCCAGCCCGCCCAGTACTTTTCCTTaGTTGTGTTCCAATTTGCCT +
Preference number: 4 (lower is better)
Translates to: KCQPIPRRRHGLPLGASPPSTFP*LCSNLP
Trigger: AGGCAAATTGGAACACAACCAAGGAAAAGTACTGGG...CGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGTCCGCTTGCTGCACGTaGACACGCTCTGAGCATCCA +
Preference number: 4 (lower is better)
Translates to: LIWTWKTSTYVAGWVLSESACCT*TRSEHP
Trigger: TGGATGCTCAGAGCGTGTCCACGTGCAGCAAGCGGA...CTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGAGAAACTGTGGCCCCTaGCAGCTTCTCCGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LIWTWKTSTYVAGWVLSERNCGP*QLLRLL
Trigger: CAGCAAGCGGAGAAGCTGCCAGGGGCCACAGTTTCT...CTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTTGTCCTCCTCATCGCTaGACGTCAATGTCTGATCCC +
Preference number: 4 (lower is better)
Translates to: LPAFAGRPLEAVQILFPSCPPHR*TSMSDP
Trigger: GGGATCAGACATTGACGTCCAGCGATGAGGAGGACA...ACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp TGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACTTCTGCAAACTGATCTaGCTTGAGCAGCCCGGCGTC +
Preference number: 4 (lower is better)
Translates to: WEASRGCADPFSQYQHPHFCKLI*LEQPGV
Trigger: GACGCCGGGCTGCTCAAGCCAGATCAGTTTGCAGAA...GTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp CATTCCCCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCACCACCTTTACGGCTCTaGCACAAGGGCGATCCACGC +
Preference number: 4 (lower is better)
Translates to: HSPITATWANRCVFQHQPPPLRL*HKGDPR
Trigger: GCGTGGATCGCCCTTGTGCCAGAGCCGTAAAGGTGG...TGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTCTCACTTGCCACCAATaGTCGTCATCTCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: GTVRRHQTAQVCSSTELALTCHQ*SSSPWG
Trigger: GCCCCAAGGAGATGACGACCATTGGTGGCAAGTGAG...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp ATGCCCCGCCCCCGCCGCTCCTTAAGCGCATCTGAGATGCCCTCTCCATTCTGCAATCATTATCCAGGCTaGAAGCATGAGACTGGGATT +
Preference number: 4 (lower is better)
Translates to: MPRPRRSLSASEMPSPFCNHYPG*KHETGI
Trigger: AATCCCAGTCTCATGCTTCCAGCCTGGATAATGATT...GCAGAATGGAGAGGGCATCTCAGATGCGCTTAAGGAGCGGCGGGGGCGGGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTAGTGCTCAGCGCCAGCTaGCAGGCCTGCAACCCTGGC +
Preference number: 4 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLVLSAS*QACNPG
Trigger: GCCAGGGTTGCAGGCCTGCCAGCTGGCGCTGAGCAC...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCAGCTTTGTCTATACCCTCCAACGTTTaGGTTGTCTCCCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: PQLPGQSVWHGMCSAALSIPSNV*VVSLPL
Trigger: AAGGGGGAGGGAGACAACCCAAACGTTGGAGGGTAT...AGACAAAGCTGCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CAA 72 bp TTTAATTGCACTACAGTCCCATGGGTGAGGAGAGCTTaGCCATCCGTGAGGCGCCGGGCAAGGCACAACAGA +
Preference number: 4 (lower is better)
Translates to: FNCTTVPWVRRA*PSVRRRARHNR
Trigger: TCTGTTGTGCCTTGCCCGGCGCCTCACGGATGGCAAAGCTCTCCTCACCCATGGGACTGTAGTGCAATTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp GCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGGAATGTAACAGGCTCTaGTATCGATGCCATGGCCAA +
Preference number: 4 (lower is better)
Translates to: APRICWEASRGCADPFSQECNRL*YRCHGQ
Trigger: TTGGCCATGGCATCGATATCAGAGCCTGTTACATTC...CTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp CTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTTTGTCGGAATGGCATTaGGGAGATAGTACAACGGGC +
Preference number: 4 (lower is better)
Translates to: LPAFAGRPLEAVQILFPSLSEWH*GDSTTG
Trigger: GCCCGTTGTACTATCTCCTCAATGCCATTCCGACAA...ACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp AACCTGTCAAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGAAGATAAACGTGGCTTaGACAGTCCCGTGGACATCA +
Preference number: 4 (lower is better)
Translates to: NLSSVNPYPAEGMGCHSEKINVA*TVPWTS
Trigger: TGATGTCCACGGGACTGTTCAAGCCACGTTTATCTT...CTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTTGACAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp AAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCCAGCCCGTCCTTCAGGCCTGCTTaGAATTCTTATAATGTTCCT +
Preference number: 4 (lower is better)
Translates to: KCQPIPRRRHGLPLGASPSFRPA*NSYNVP
Trigger: AGGAACATTATAAGAATTTCAAGCAGGCCTGAAGGA...CGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp GCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGCTGTGTCATCATCAGTaGCAGCATGCCAGAGATTTG +
Preference number: 4 (lower is better)
Translates to: APRICWEASRGCADPFSQLCHHQ*QHARDL
Trigger: CAAATCTCTGGCATGCTGTCACTGATGATGACACAG...CTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp TGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACCAGGCCCAGATGTGCTaGTTTCCACATGCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: WEASRGCADPFSQYQHPHQAQMC*FPHAKL
Trigger: AAGCTTGGCATGTGGAAATCAGCACATCTGGGCCTG...GTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp CTTCTCACAGCTCAGGCACCACACTCGGCCAGGTTTGGAAAAAGTCTAGTTTATCGCGCTGCAGAGAGCTaGCCTTTGGCTCCATCTGGC +
Preference number: 4 (lower is better)
Translates to: LLTAQAPHSARFGKSLVYRAAES*PLAPSG
Trigger: GCCAGATGGAGCCAAAGGTCAGCTCTCTGCAGCGCG...ATAAACTAGACTTTTTCCAAACCTGGCCGAGTGTGGTGCCTGAGCTGTGAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp CCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAGGCCAGCTCCTTAAGCGCATCTaGGATGCCCTCTCCATTCTG +
Preference number: 4 (lower is better)
Translates to: PITATWANRCVFQHQPGQLLKRI*DALSIL
Trigger: CAGAATGGAGAGGGCATCTCAGATGCGCTTAAGGAG...CTGGCCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CATTCCCCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAGCCAGAGGCTGTGCCTaGTGCCACCAGGTCATCAAA +
Preference number: 4 (lower is better)
Translates to: HSPITATWANRCVFQHQPARGCA*CHQVIK
Trigger: TTTGATGACCTGGTGGCAGCAGGCACAGCCTCTGGC...TGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp ATCCCGAATTCCAGTTGTGATGTTGATGAACGAGAGTGTGTAGACCCTGGGGGCAGCTTCTCCGCTTGCTaGACGTGGACACGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: IPNSSCDVDERECVDPGGSFSAC*TWTRSE
Trigger: CTCAGAGCGTGTCCACGTGCAGCAAGCGGAGAAGCT...GCCCCCAGGGTCTACACACTCTCGTTCATCAACATCACAACTGGAATTCGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp CCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAGGCCAGACTGATCCACGCTACTaGCCAGGACACTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: PITATWANRCVFQHQPGQTDPRY*PGHLRS
Trigger: TGACCTCAAGTGTCCTGGGCAGTAGCGTGGATCAGT...CTGGCCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTACGCCCGGCAACGCGCTaGAGAACAGGCCGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLRPATR*RTGRLC
Trigger: ACAAAGGCGGCCTGTTCTGCAGCGCGTTGCCGGGCG...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp ATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCGATCCCCGAGCGTTATaGAGACGGGTTCTAAAGCTT +
Preference number: 4 (lower is better)
Translates to: MAPRICWEASRGCADPFSDPRAL*RRVLKL
Trigger: AAGCTTTAGAACCCGTCTGCATAACGCTCGGGGATC...GGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp CCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCAGCTTTGTCTTCCGTGATGCTCACTTaGCACCAATGGTCGTCATCT +
Preference number: 4 (lower is better)
Translates to: PQLPGQSVWHGMCSAALSSVMLT*HQWSSS
Trigger: AGATGACGACCATTGGTGGCAAGTGAGCATCACGGA...AGACAAAGCTGCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CTTCTCACAGCTCAGGCACCACACTCGGCCAGGTTTGGAAAAAGTCTAGTTTATTACGGGGGCTTGGGCTaGTGTGGCCACCGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: LLTAQAPHSARFGKSLVYYGGLG*CGHRVS
Trigger: ACTCACTCGGTGGCCACAGCAGCCCAAGCCCCCGTA...ATAAACTAGACTTTTTCCAAACCTGGCCGAGTGTGGTGCCTGAGCTGTGAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp TGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATGGAGGGCCGCGACTGTaGGCTCTGGGCGCTGACGCT +
Preference number: 4 (lower is better)
Translates to: CRLFHERNLLTLTWLFPNGGPRL*ALGADA
Trigger: AGCGTCAGCGCCCAGAGCGCACAGTCGCGGCCCTCC...ATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAATAGCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp AGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTTCCAGTGTGGTGAGGTATGGTaGAGTGCGGTGTGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: SEEASNSTGLQFYRAGFQCGEVW*SAVWCG
Trigger: ACCACACCACACCGCACTGCACCATACCTCACCACA...CTGGAAGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp AACCTGTCAAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCTGATATCGATGCCATaGCCAAGGTTTCCACAGACT +
Preference number: 4 (lower is better)
Translates to: NLSSVNPYPAEGMGCHSELISMP*PRFPQT
Trigger: AGTCTGTGGAAACCTTGGCCATGGCATCGATATCAG...CTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTTGACAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp ATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATAGAAACTGTGGCCCCTaGCAGCTTCTCCGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: ICWEASRGCADPFSQYQHRNCGP*QLLRLL
Trigger: CAGCAAGCGGAGAAGCTGCCAGGGGCCACAGTTTCT...ATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp CCCTTGCAGGGCTCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGTTCACGACAAGCTCCTaGTCAAAGTCCTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: PLQGSGEKHIGHSHGHLWFTTSS*SKSSEL
Trigger: CAGCTCAGAGGACTTTGACCAGGAGCTTGTCGTGAA...CCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGAGCCCTGCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTTGAAGCTGCTTTCCTaGTCTGGAGACTCTGCACTT +
Preference number: 4 (lower is better)
Translates to: APRICWEASRGCADPFSQLKLLS*SGDSAL
Trigger: AAGTGCAGAGTCTCCAGACCAGGAAAGCAGCTTCAA...CTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp GAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACGGCTCAGGTCCTGCTaGGAGCAACTAGGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: EAVQILFPSTSILTVSVLRLRSC*EQLGPS
Trigger: GCTCGGACCTAGTTGCTCCCAGCAGGACCTGAGCCG...TAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp GTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGTGGCCACCGAGTGAGTaGCATGGATTATCGTCTGAA +
Preference number: 4 (lower is better)
Translates to: VPTWDTRAHIQVPFAPIRWPPSE*HGLSSE
Trigger: TTCAGACGATAATCCATGCCACTCACTCGGTGGCCA...CCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp TTTCGGCATCTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCGACCCCGAGAAGGCTTaGCTGGCACTGAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FRHLDLIWTWKTSTYVAGDPEKA*LALKLL
Trigger: CAGCAGCTTCAGTGCCAGCCAAGCCTTCTCGGGGTC...GCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCTTCCCTTAGCGACGTaGAATTCATTCTTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: AWLPAFAGRPLEAVQILFLPLAT*NSFLPE
Trigger: CTCGGGCAAGAATGAATTCCACGTCGCTAAGGGAAG...AAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp CGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGAGCTTCCTTCCTTCGTaGGAGCTGCAGAAGCCAACA +
Preference number: 4 (lower is better)
Translates to: RICWEASRGCADPFSQYQSFLPS*ELQKPT
Trigger: TGTTGGCTTCTGCAGCTCCCACGAAGGAAGGAAGCT...CTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTAGCAGGCCTGCAACCCTaGCACATGCTCCCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLAGLQP*HMLPGG
Trigger: ACCGCCTGGGAGCATGTGCCAGGGTTGCAGGCCTGC...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CATTCCCCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCATGGGTGCCGTGCGAGTaGCTGAACGTCTTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: HSPITATWANRCVFQHQPWVPCE*LNVFVS
Trigger: GCTGACAAAGACGTTCAGCCACTCGCACGGCACCCA...TGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTATGTGGAAGGAGGCCCTaGGCCAAACCAGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLCGRRP*AKPAAR
Trigger: CCGGGCAGCTGGTTTGGCCCAGGGCCTCCTTCCACA...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CTTCTCACAGCTCAGGCACCACACTCGGCCAGGTTTGGAAAAAGTCTAGTTTATGCGTGGGTTCTCTCCTaGCATGGCCAGCGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LLTAQAPHSARFGKSLVYAWVLS*HGQRSP
Trigger: AGGAGAGCGCTGGCCATGCCAGGAGAGAACCCACGC...ATAAACTAGACTTTTTCCAAACCTGGCCGAGTGTGGTGCCTGAGCTGTGAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp AGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTTCCAGGTCCTGCTGCTGTGCTaGGCGTCATCTTTTGCGTGT +
Preference number: 4 (lower is better)
Translates to: SEEASNSTGLQFYRAGFQVLLLC*ASSFAC
Trigger: ACACGCAAAAGATGACGCCCAGCACAGCAGCAGGAC...CTGGAAGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGGCAGTTCTACAGAGCTaGCTTCCAGTCCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LIWTWKTSTYVAGWVLSEAVLQS*LPVPVL
Trigger: CAGCACTGGGACTGGAAGCCAGCTCTGTAGAACTGC...CTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp GTCCTGTCAGAGAACATATTTTATCACCCTCCACCTGCGGCCTGGGGGCTCCCTGAATGTAACAGGCTCTaGTATCGATGCCATGGCCAA +
Preference number: 4 (lower is better)
Translates to: VLSENIFYHPPPAAWGLPECNRL*YRCHGQ
Trigger: TTGGCCATGGCATCGATATCAGAGCCTGTTACATTC...AGGGAGCCCCCAGGCCGCAGGTGGAGGGTGATAAAATATGTTCTCTGACAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp GGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTATTTCTCCCTGGCAATaGAGATACAAGTTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: GGMAPRICWEASRGCADPISPWQ*RYKLKN
Trigger: GTTTTTCAACTTGTATCTTCATTGCCAGGGAGAAAT...AGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp CAGCTCTGGAGCGGCCATTCCCCCATAACAGCCACTTGGGCAAACCGGTGTGTAAGCACCCAGCCTTCTTaGAAGAAACATGAAACAAGC +
Preference number: 4 (lower is better)
Translates to: QLWSGHSPITATWANRCVSTQPS*KKHETS
Trigger: GCTTGTTTCATGTTTCTTTCAAGAAGGCTGGGTGCT...TACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATGGCCGCTCCAGAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTCAACTGTGGCCTGGTTaGCTGTGTCTAGGAGATAGA +
Preference number: 4 (lower is better)
Translates to: GTVRRHQTAQVCSSTELAQLWPG*LCLGDR
Trigger: TCTATCTCCTAGACACAGTCAACCAGGCCACAGTTG...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp CCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAGGCCAGCGTTCACTTCACCATTaGAGCTGCTTTCCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: PITATWANRCVFQHQPGQRSLHH*SCFPGL
Trigger: CAGACCAGGAAAGCAGCTTCAATGGTGAAGTGAACG...CTGGCCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp AGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACCATTGTTCCGGGCTGTaGTCTGGGACAGCGGGTAGG +
Preference number: 4 (lower is better)
Translates to: RLCRSFFPVPASSQFLSYHCSGL*SGTAGR
Trigger: CCTACCCGCTGTCCCAGATCACAGCCCGGAACAATG...GTAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp GGTGGAGGCTGTGGGTTCTGGAACGAGACAGAAACCAACATAGATGAAAGTAAGCTGACGCAGTCACTGTaGAACACGACACGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: GGGCGFWNETETNIDESKLTQSL*NTTRCR
Trigger: CCGGCAGCGTGTCGTGTTTCACAGTGACTGCGTCAG...CTTACTTTCATCTATGTTGGTTTCTGTCTCGTTCCAGAACCCACAGCCTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp GGTGGAGGCTGTGGGTTCTGGAACGAGACAGAAACCAACATAGATGAAAGTAAGTGTCTGGACAAGTGTTaGGGCAGCGCGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: GGGCGFWNETETNIDESKCLDKC*GSASTR
Trigger: CCTGGTGGACGCGCTGCCTCAACACTTGTCCAGACA...CTTACTTTCATCTATGTTGGTTTCTGTCTCGTTCCAGAACCCACAGCCTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp TTTCGGCATCTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGTGGTGTGGTGTGGTaGGATGTGGCGAGGTACGGT +
Preference number: 4 (lower is better)
Translates to: FRHLDLIWTWKTSTYVAGCGVVW*DVARYG
Trigger: ACCGTACCTCGCCACATCTCACCACACCACACCACA...GCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTAGCCGTGTGTGGGCAGTaGGGTGTGGTGTGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLAVCGQ*GVVWCG
Trigger: ACCACACCACACCACACCTCACTGCCCACACACGGC...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp CCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGCTTTTCCTTCTGCTTTTGTaGAGGGCCCTTACACTCGAC +
Preference number: 4 (lower is better)
Translates to: PTWDTRAHIQVPFAPIRLFLLLL*RALTLD
Trigger: GTCGAGTGTAAGGGCCCTTCACAAAAGCAGAAGGAA...AAGCCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp CTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGAGAACCACGCTTTCATaGCCATGCCCGGGAACTTCA +
Preference number: 4 (lower is better)
Translates to: LIWTWKTSTYVAGWVLSERTTLS*PCPGTS
Trigger: TGAAGTTCCCGGGCATGGTCATGAAAGCGTGGTTCT...CTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp CTGTGCCGTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCACTATGACCAGCTGCTaGTCACAAGTAGAGAACTTG +
Preference number: 4 (lower is better)
Translates to: LCRPYLGHTCTHPGSICTTMTSC*SQVENL
Trigger: CAAGTTCTCTACTTGTGATCAGCAGCTGGTCATAGT...GGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGACGGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGCTTGATTCCAGACGCGGGTaGAGTTCAAAAGGCTTGACT +
Preference number: 4 (lower is better)
Translates to: PTWDTRAHIQVPFAPIRLDSRRG*SSKGLT
Trigger: AGTCAAGCCTTTTGAACTGCACCCGCGTCTGGAATC...AAGCCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGATTTGGTCCATCATCTaGAGGACACGGCTCATCTCC +
Preference number: 4 (lower is better)
Translates to: RICWEASRGCADPFSQYQIWSII*RTRLIS
Trigger: GGAGATGAGCCGTGTCCTGCAGATGATGGACCAAAT...CTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp TTTCGGCATCTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCATGTCTTCCCCATCATaGGCCCCAGGAGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: FRHLDLIWTWKTSTYVAGMSSPS*APGELS
Trigger: GGACAGCTCTCCTGGGGCGCATGATGGGGAAGACAT...GCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCAGCTTTGTCTGGACTTCACAAAAAGTaGTTTGGGGGCCAATGGGTT +
Preference number: 4 (lower is better)
Translates to: PQLPGQSVWHGMCSAALSGLHKK*FGGQWV
Trigger: AACCCATTGGCCCCCAAAGCACTTTTTGTGAAGTCC...AGACAAAGCTGCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp ATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCATGCGCAGCTTATCTaGCACCTTTTCTACGGGGGC +
Preference number: 4 (lower is better)
Translates to: ICWEASRGCADPFSQYQHHAQLI*HLFYGG
Trigger: GCCCCCGTAGAAAAGGTGGCAGATAAGCTGCGCATG...ATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp CGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCGTGGAATTCATTCTTaGCCGAGGAGATCCAGACAC +
Preference number: 4 (lower is better)
Translates to: RICWEASRGCADPFSQYQRGIHS*PRRSRH
Trigger: GTGTCTGGATCTCCTCGGGCAAGAATGAATTCCACG...CTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp CTTCTCACAGCTCAGGCACCACACTCGGCCAGGTTTGGAAAAAGTCTAGTTTATGGTAATCGGAGTGCATaGAGCCGGGCAGTCGCCACT +
Preference number: 4 (lower is better)
Translates to: LLTAQAPHSARFGKSLVYGNRSA*SRAVAT
Trigger: AGTGGCGACTGCCCGGCTGCATGCACTCCGATTACC...ATAAACTAGACTTTTTCCAAACCTGGCCGAGTGTGGTGCCTGAGCTGTGAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAGGCCAGTTGTGTGTTGTGGTGTaGATGTGCGTGGGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: PITATWANRCVFQHQPGQLCVVV*MCVGSL
Trigger: GAGAGAACCCACGCACATGCACACCACAACACACAA...CTGGCCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GTCCTGTCAGAGAACATATTTTATCACCCTCCACCTGCGGCCTGGGGGCTCCCTCATCCAGGTTCCATTTaGACCCATCAGGCTTTACTG +
Preference number: 4 (lower is better)
Translates to: VLSENIFYHPPPAAWGLPHPGSI*THQALL
Trigger: CAGTAAAGCCTGATGGGTGCAAATGGAACCTGGATG...AGGGAGCCCCCAGGCCGCAGGTGGAGGGTGATAAAATATGTTCTCTGACAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAGGCCAGCTTCCTGCACACACGTaGTTCTTAATAGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PITATWANRCVFQHQPGQLPAHT*FLIAAG
Trigger: GCCTGCAGCTATTAAGAAGCACGTGTGTGCAGGAAG...CTGGCCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp TGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACGAGCGGAAACCCTTCTaGATCTTTGTCGGAATGGCA +
Preference number: 4 (lower is better)
Translates to: WEASRGCADPFSQYQHPHERKPF*IFVGMA
Trigger: TGCCATTCCGACAAAGATCCAGAAGGGTTTCCGCTC...GTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp GCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTACAATTTCATTCCATTaGGGCTCCAAGCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: AWLPAFAGRPLEAVQILFTISFH*GSKPEL
Trigger: CAGCTCTGGCTTGGAGCCCCAATGGAATGAAATTGT...AAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp ATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCGAGTTACAGAGCCCCTaGTCTAGATCCAGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: MAPRICWEASRGCADPFSELQSP*SRSREE
Trigger: TTCTTCTCTGGATCTAGACCAGGGGCTCTGTAACTC...GGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp CTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTAATCCAGCTGCACAATaGAAGATGGCTCCTCCAACA +
Preference number: 4 (lower is better)
Translates to: LPAFAGRPLEAVQILFPSNPAAQ*KMAPPT
Trigger: TGTTGGAGGAGCCATCTTCCATTGTGCAGCTGGATT...ACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp CCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGCTTTCTGTGTTCAAGGACTaGGGACTGTCCCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: PTWDTRAHIQVPFAPIRLSVFKD*GLSPGN
Trigger: ATTTCCTGGGGACAGTCCCCAGTCCTTGAACACAGA...AAGCCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTGTCAGTATTTTCCTGTaGGACACCGTTCACTTCACC +
Preference number: 4 (lower is better)
Translates to: LPAFAGRPLEAVQILFPSVSIFL*DTVHFT
Trigger: GGTGAAGTGAACGGTGTCCCACAGGAAAATACTGAC...ACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp AGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACAGGGCTTGTGAGTGCTaGCTGCCAAGGCAGAGACCG +
Preference number: 4 (lower is better)
Translates to: RLCRSFFPVPASSQFLSYRACEC*LPRQRP
Trigger: CGGTCTCTGCCTTGGCAGCCAGCACTCACAAGCCCT...GTAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp AGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTTCCAGTGTCCTCCTCATCGCTaGACGTCAATGTCTGATCCC +
Preference number: 4 (lower is better)
Translates to: SEEASNSTGLQFYRAGFQCPPHR*TSMSDP
Trigger: GGGATCAGACATTGACGTCCAGCGATGAGGAGGACA...CTGGAAGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTAGGGCTTGGGCTGCTGTaGCCACCGAGTGAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLGLGLL*PPSEWH
Trigger: ATGCCACTCACTCGGTGGCCACAGCAGCCCAAGCCC...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACTGAAGAGGGGCTTGGGCTGCTGTaGCCACCGAGTGAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: ADPFSQYQHPHSFCLTEEGLGLL*PPSEWH
Trigger: ATGCCACTCACTCGGTGGCCACAGCAGCCCAAGCCC...CTCTTCAGTAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp ATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATAGGTCCTTGCTGCTCTaGCACAGCCACAGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: ICWEASRGCADPFSQYQHRSLLL*HSHRKL
Trigger: AAGCTTCCTGTGGCTGTGCCAGAGCAGCAAGGACCT...ATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp TTTCGGCATCTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTCGTTGGGGCTGGAATaGACGCTGACCAAGCTGACC +
Preference number: 4 (lower is better)
Translates to: FRHLDLIWTWKTSTYVAGSLGLE*TLTKLT
Trigger: GGTCAGCTTGGTCAGCGTCCATTCCAGCCCCAACGA...GCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp TGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATTCCAGGTCCTCAGGGTaGGGCATGGCGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CRLFHERNLLTLTWLFPNSRSSG*GMAAWL
Trigger: CAGCCAGGCCGCCATGCCCCACCCTGAGGACCTGGA...ATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAATAGCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGGGAGGCTGTGGGTTCTaGAACGAGACAGAAACCAAC +
Preference number: 4 (lower is better)
Translates to: LIWTWKTSTYVAGWVLSEGGCGF*NETETN
Trigger: GTTGGTTTCTGTCTCGTTCCAGAACCCACAGCCTCC...CTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp TTTCGGCATCTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGTGCCGTCCCTACCTaGGACACACGTGCACACATC +
Preference number: 4 (lower is better)
Translates to: FRHLDLIWTWKTSTYVAGCAVPT*DTRAHI
Trigger: GATGTGTGCACGTGTGTCCCAGGTAGGGACGGCACA...GCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp TTTCGGCATCTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCGGCCCTCCGAGGGTCTaGGCCATGCCATTCAATAGA +
Preference number: 4 (lower is better)
Translates to: FRHLDLIWTWKTSTYVAGGPPRV*AMPFNR
Trigger: TCTATTGAATGGCATGGCCCAGACCCTCGGAGGGCC...GCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CAA 72 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTaGTGGGTACTAACATTATTCCTCCCTGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SGEKHIGHSHGH*WVLTLFLPACP
Trigger: GGGGCAGGCAGGGAGGAATAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CAA 72 bp TACAGAGCTGGCTTCCAGTCCCAGTGCTGTGTGACCTaGAGCAAGTTACCTAACCTCTCTGAGTCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: YRAGFQSQCCVT*SKLPNLSESQG
Trigger: CCCTTGAGACTCAGAGAGGTTAGGTAACTTGCTCAAGGTCACACAGCACTGGGACTGGAAGCCAGCTCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp AGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTTCCAGTTGTCGGAATGGCATTaGGGAGATAGTACAACGGGC +
Preference number: 4 (lower is better)
Translates to: SEEASNSTGLQFYRAGFQLSEWH*GDSTTG
Trigger: GCCCGTTGTACTATCTCCTCAATGCCATTCCGACAA...CTGGAAGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp CCCTTGCAGGGCTCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGTTCTTGAAAGAAACATaGAACAAGCCCCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PLQGSGEKHIGHSHGHLWFLKET*NKPQVP
Trigger: AGGCACCTGGGGCTTGTTTCATGTTTCTTTCAAGAA...CCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGAGCCCTGCAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp ATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCTTCTTGAAAGAAACATaGAACAAGCCCCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: MAPRICWEASRGCADPFSFLKET*NKPQVP
Trigger: AGGCACCTGGGGCTTGTTTCATGTTTCTTTCAAGAA...GGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTACAAACTGATCTGGCTTaGGCAGCCCGGCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLQTDLA*AARRPL
Trigger: CAGAGGACGCCGGGCTGCTCAAGCCAGATCAGTTTG...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTAAAGACATTTCTAAGTaGGCGACCCTTGCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: GTVRRHQTAQVCSSTELAKDISK*ATLAQL
Trigger: GAGCTGAGCAAGGGTCGCTCACTTAGAAATGTCTTT...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp CTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGCCTGAGGTTTCTTGCTaGGGTCATTTCCTGGCACAT +
Preference number: 4 (lower is better)
Translates to: LIWTWKTSTYVAGWVLSEPEVSC*GHFLAH
Trigger: ATGTGCCAGGAAATGACCTCAGCAAGAAACCTCAGG...CTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp GGTGGAGGCTGTGGGTTCTGGAACGAGACAGAAACCAACATAGATGAAAGTAAGCTTGCAGGGCTCTGGTaGGAAGCACATTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: GGGCGFWNETETNIDESKLAGLW*EAHWAQ
Trigger: CTGTGCCCAATGTGCTTCTCACCAGAGCCCTGCAAG...CTTACTTTCATCTATGTTGGTTTCTGTCTCGTTCCAGAACCCACAGCCTCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp ATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATATGTCACACTTCCACTaGTCGCCTTCCGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: ICWEASRGCADPFSQYQHMSHFH*SPSGQK
Trigger: CTTCTGTCCGGAAGGCGAGCAGTGGAAGTGTGACAT...ATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp CTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACGGGTTCTAAAGCTTaGCTTTCGCTGACAATGTCA +
Preference number: 4 (lower is better)
Translates to: LPAFAGRPLEAVQILFPSTGSKA*LSLTMS
Trigger: TGACATTGTCAGCGAAAGGCAAGCTTTAGAACCCGT...ACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp CTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGGATCCCCGAGCGTTATaGAGACGGGTTCTAAAGCTT +
Preference number: 4 (lower is better)
Translates to: LIWTWKTSTYVAGWVLSEDPRAL*RRVLKL
Trigger: AAGCTTTAGAACCCGTCTGCATAACGCTCGGGGATC...CTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp AGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTTCCAGAGACGCGGGTTTAATTaGACTACAGTCCCATGGGTG +
Preference number: 4 (lower is better)
Translates to: SEEASNSTGLQFYRAGFQRRGFN*TTVPWV
Trigger: CACCCATGGGACTGTAGTGCAATTAAACCCGCGTCT...CTGGAAGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CTGTTTCAGCTGAAGTGTGCTCTCCAGGAGGCGGGCAGCCTGCGCCGTGTGTGGAAAAGTCTAGTTTATTaGACTGACTCAAAGCACAAC +
Preference number: 4 (lower is better)
Translates to: LFQLKCALQEAGSLRRVWKSLVY*TDSKHN
Trigger: GTTGTGCTTTGAGTCAGTGCAATAAACTAGACTTTT...CCACACACGGCGCAGGCTGCCCGCCTCCTGGAGAGCACACTTCAGCTGAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTTTATTCCTCCCTGCCTaGCCCAACAAAACAATCCCA +
Preference number: 4 (lower is better)
Translates to: GTVRRHQTAQVCSSTELALFLPA*PNKTIP
Trigger: TGGGATTGTTTTGTTGGGGCAGGCAGGGAGGAATAA...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CTGTGCCGTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCACACTCGACTCGAAGTaGTCCTCCTATTGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: LCRPYLGHTCTHPGSICTTLDSK*SSYWFL
Trigger: TAAAAACCAATAGGAGGAGCACTTCGAGTCGAGTGT...GGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGACGGCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp AACCTGTCAAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGATGGCTGTTCCCAAATaGCAGGCTGTTTTAAGTGTT +
Preference number: 4 (lower is better)
Translates to: NLSSVNPYPAEGMGCHSEMAVPK*QAVLSV
Trigger: AACACTTAAAACAGCCTGGCATTTGGGAACAGCCAT...CTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTTGACAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp ATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCTGCACAATGGAAGATaGCTCCTCCAACACCAGCTG +
Preference number: 4 (lower is better)
Translates to: ICWEASRGCADPFSQYQHLHNGR*LLQHQL
Trigger: CAGCTGGTGTTGGAGGAGCCATCTTCCATTGTGCAG...ATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp TGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATTGCTCCTTGGCTCGCTaGCCACGGAGCTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: CRLFHERNLLTLTWLFPNCSLAR*PRSWPW
Trigger: CCATGGCCAGCTCCGTGGCCAGCGAGCCAAGGAGCA...ATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAATAGCCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTTTGAAGCTGCTTTCCTaGTCTGGAGACTCTGCACTT +
Preference number: 4 (lower is better)
Translates to: GTVRRHQTAQVCSSTELALKLLS*SGDSAL
Trigger: AAGTGCAGAGTCTCCAGACCAGGAAAGCAGCTTCAA...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTGAGCTGTCCTGTTCTTaGAAGGGTAACTGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: GTVRRHQTAQVCSSTELAELSCS*KGNCVL
Trigger: TAGCACACAGTTACCCTTCCAAGAACAGGACAGCTC...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp ATCCCGAATTCCAGTTGTGATGTTGATGAACGAGAGTGTGTAGACCCTGGGGGCTGCTTTGGGGGCCAATaGGTTGGATGTCTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: IPNSSCDVDERECVDPGGCFGGQ*VGCLPH
Trigger: ATGGGGAAGACATCCAACCCATTGGCCCCCAAAGCA...GCCCCCAGGGTCTACACACTCTCGTTCATCAACATCACAACTGGAATTCGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTTCACAAAAAGTGCTTTaGGGGCCAATGGGTTGGATG +
Preference number: 4 (lower is better)
Translates to: GTVRRHQTAQVCSSTELASQKVL*GPMGWM
Trigger: CATCCAACCCATTGGCCCCCAAAGCACTTTTTGTGA...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CTTCTCACAGCTCAGGCACCACACTCGGCCAGGTTTGGAAAAAGTCTAGTTTATAGCACCCACAGCATCTaGTCGTTGGGGCTGGAATGG +
Preference number: 4 (lower is better)
Translates to: LLTAQAPHSARFGKSLVYSTHSI*SLGLEW
Trigger: CCATTCCAGCCCCAACGACCAGATGCTGTGGGTGCT...ATAAACTAGACTTTTTCCAAACCTGGCCGAGTGTGGTGCCTGAGCTGTGAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAGGCCAGCCCACCAACAAAAGCTaGAGCTATCTGTGGATGAGA +
Preference number: 4 (lower is better)
Translates to: PITATWANRCVFQHQPGQPTNKS*SYLWMR
Trigger: TCTCATCCACAGATAGCTCCAGCTTTTGTTGGTGGG...CTGGCCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CTTCTCACAGCTCAGGCACCACACTCGGCCAGGTTTGGAAAAAGTCTAGTTTATCCTGGCCAGAGCGTCTaGCATGGAATGTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LLTAQAPHSARFGKSLVYPGQSV*HGMCSA
Trigger: TGCAGAGCACATTCCATGCCAGACGCTCTGGCCAGG...ATAAACTAGACTTTTTCCAAACCTGGCCGAGTGTGGTGCCTGAGCTGTGAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCAGCTTTGTCTGACCTCATTTGGACATaGAAAACCTCCACCTATGTG +
Preference number: 4 (lower is better)
Translates to: PQLPGQSVWHGMCSAALSDLIWT*KTSTYV
Trigger: CACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTC...AGACAAAGCTGCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GTCCTGTCAGAGAACATATTTTATCACCCTCCACCTGCGGCCTGGGGGCTCCCTCATCTTGACCTCATTTaGACATGGAAAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: VLSENIFYHPPPAAWGLPHLDLI*TWKTST
Trigger: GGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATG...AGGGAGCCCCCAGGCCGCAGGTGGAGGGTGATAAAATATGTTCTCTGACAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp TGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATGCACTCTCCCTGTGGTaGGGCTGGGCTGGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: CRLFHERNLLTLTWLFPNALSLW*GWAGRF
Trigger: GAACCTGCCAGCCCAGCCCCACCACAGGGAGAGTGC...ATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAATAGCCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAGGCCAGGGTTTCCAGCAGCTCTaGTTTGCGATATGGTTTCGT +
Preference number: 4 (lower is better)
Translates to: PITATWANRCVFQHQPGQGFQQL*FAIWFR
Trigger: ACGAAACCATATCGCAAACCAGAGCTGCTGGAAACC...CTGGCCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAGGCCAGATCTTTTGCGTGTGCTaGTTTCCAGCAGCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: PITATWANRCVFQHQPGQIFCVC*FPAALV
Trigger: AACCAGAGCTGCTGGAAACCAGCACACGCAAAAGAT...CTGGCCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACTGAAGAGAGAGTGTGTAGACCCTaGGGGCATGGCTCCCCGCAT +
Preference number: 4 (lower is better)
Translates to: ADPFSQYQHPHSFCLTEERVCRP*GHGSPH
Trigger: ATGCGGGGAGCCATGCCCCCAGGGTCTACACACTCT...CTCTTCAGTAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp GCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTCCTTCAGGCCTGCTTaGAATTCTTATAATGTTCCT +
Preference number: 4 (lower is better)
Translates to: APRICWEASRGCADPFSQSFRPA*NSYNVP
Trigger: AGGAACATTATAAGAATTTCAAGCAGGCCTGAAGGA...CTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp ATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCTGGTCAAAGTCCTCTaGGCTGATGGCGTTGAATCT +
Preference number: 4 (lower is better)
Translates to: ICWEASRGCADPFSQYQHLVKVL*ADGVES
Trigger: AGATTCAACGCCATCAGCTCAGAGGACTTTGACCAG...ATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp GGTGGAGGCTGTGGGTTCTGGAACGAGACAGAAACCAACATAGATGAAAGTAAGCAGCTTTCTGCAAACTaGTCTGGCTTGAGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: GGGCGFWNETETNIDESKQLSAN*SGLSSP
Trigger: CGGGCTGCTCAAGCCAGATCAGTTTGCAGAAAGCTG...CTTACTTTCATCTATGTTGGTTTCTGTCTCGTTCCAGAACCCACAGCCTCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp CCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGCTTGCATGGATTATCGTCTaGAATAAGCTGCACTGGTCA +
Preference number: 4 (lower is better)
Translates to: PTWDTRAHIQVPFAPIRLAWIIV*NKLHWS
Trigger: TGACCAGTGCAGCTTATTTCAGACGATAATCCATGC...AAGCCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp TGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACGCATGGATTATCGTCTaGAATAAGCTGCACTGGTCA +
Preference number: 4 (lower is better)
Translates to: WEASRGCADPFSQYQHPHAWIIV*NKLHWS
Trigger: TGACCAGTGCAGCTTATTTCAGACGATAATCCATGC...GTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp CTTCTCACAGCTCAGGCACCACACTCGGCCAGGTTTGGAAAAAGTCTAGTTTATAGACACCGCTGTTATTaGCCCCGAGAAGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LLTAQAPHSARFGKSLVYRHRCY*PREGLA
Trigger: AGCCAAGCCTTCTCGGGGTCAATAACAGCGGTGTCT...ATAAACTAGACTTTTTCCAAACCTGGCCGAGTGTGGTGCCTGAGCTGTGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTACTACAGTCCCATGGGTaGGGAGAGCTTTGCCATCCG +
Preference number: 4 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLLQSHG*GELCHP
Trigger: CGGATGGCAAAGCTCTCCTCACCCATGGGACTGTAG...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTAGGAGTGACGGGACAGTaGGGAGGCATCAAACAGCAC +
Preference number: 4 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLGVTGQ*GGIKQH
Trigger: GTGCTGTTTGATGCCTCCTCACTGTCCCGTCACTCC...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTATTTTGCCCAGAGAATaGAGCAGTGGCCACATTAGT +
Preference number: 4 (lower is better)
Translates to: GTVRRHQTAQVCSSTELAILPRE*SSGHIS
Trigger: ACTAATGTGGCCACTGCTTCATTCTCTGGGCAAAAT...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp CCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAGGCCAGTCCTCCCCGGAGTTATaGAAAATTTCAAACCTGCCA +
Preference number: 4 (lower is better)
Translates to: PITATWANRCVFQHQPGQSSPEL*KISNLP
Trigger: TGGCAGGTTTGAAATTTTTCATAACTCCGGGGAGGA...CTGGCCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTAAGTACAGATAGAGCATaGCGATGCTGCTGCCCACCG +
Preference number: 4 (lower is better)
Translates to: EAVQILFPSTSILTVSVLSTDRA*RCCCPP
Trigger: CGGTGGGCAGCAGCATCGGCATGCTCTATCTGTACT...TAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp ATCCCGAATTCCAGTTGTGATGTTGATGAACGAGAGTGTGTAGACCCTGGGGGCTGTGACAGGTGCTCCTaGTTCCACCTTCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: IPNSSCDVDERECVDPGGCDRCS*FHLLSS
Trigger: AGAAGACAGAAGGTGGAAGCAGGAGCACCTGTCACA...GCCCCCAGGGTCTACACACTCTCGTTCATCAACATCACAACTGGAATTCGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp CCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAGGCCAGGGAAGGGTAACTGTGTaGTATTTGGTCCATCATCTG +
Preference number: 4 (lower is better)
Translates to: PITATWANRCVFQHQPGQGRVTV*YLVHHL
Trigger: CAGATGATGGACCAAATAGCACACAGTTACCCTTCC...CTGGCCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp ATCCCGAATTCCAGTTGTGATGTTGATGAACGAGAGTGTGTAGACCCTGGGGGCGCCCATCCAGCTTTCTaGAAACTGATCTGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: IPNSSCDVDERECVDPGGAHPAF*KLIWLE
Trigger: CTCAAGCCAGATCAGTTTGCAGAAAGCTGGATGGGC...GCCCCCAGGGTCTACACACTCTCGTTCATCAACATCACAACTGGAATTCGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp AAGCCTTTGCCATCCAGAAATCAGACAGTTTTCCCACTGGTTTTAGATTCTTTAACTCTGAAGCCCCTGTaGCCGCCACAGACGCCGGGC +
Preference number: 4 (lower is better)
Translates to: KPLPSRNQTVFPLVLDSLTLKPL*PPQTPG
Trigger: GCCCGGCGTCTGTGGCGGGCACAGGGGCTTCAGAGT...TAAAGAATCTAAAACCAGTGGGAAAACTGTCTGATTTCTGGATGGCAAAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp AAGCCTTTGCCATCCAGAAATCAGACAGTTTTCCCACTGGTTTTAGATTCTTTAGCCCTCACACGCAGATaGCAGTGGGCGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: KPLPSRNQTVFPLVLDSLALTRR*QWAGWA
Trigger: TGCCCACCCCGCCCACTGGCATCTGCGTGTGAGGGC...TAAAGAATCTAAAACCAGTGGGAAAACTGTCTGATTTCTGGATGGCAAAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTACGAGGGTCTGGGCCATaGCATTCAATAGAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLRGSGP*HSIEWP
Trigger: GGGCCACTCTATTGAATGGCATGGCCCAGACCCTCG...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CATTCCCCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCATTGTACTTCCTCATCTaGTTGAGGTGCCGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: HSPITATWANRCVFQHQPLYFLI*LRCRQY
Trigger: GTACTGCCGGCACCTCAACCAGATGAGGAAGTACAA...TGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp ATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATTTGTACTTCCTCATCTaGTTGAGGTGCCGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: ICWEASRGCADPFSQYQHLYFLI*LRCRQY
Trigger: GTACTGCCGGCACCTCAACCAGATGAGGAAGTACAA...ATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp CTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTCCCAGTACTTTTCCTTaGTTGTGTTCCAATTTGCCT +
Preference number: 4 (lower is better)
Translates to: LPAFAGRPLEAVQILFPSPSTFP*LCSNLP
Trigger: AGGCAAATTGGAACACAACCAAGGAAAAGTACTGGG...ACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp ATCCCGAATTCCAGTTGTGATGTTGATGAACGAGAGTGTGTAGACCCTGGGGGCTTCACGACAAGCTCCTaGTCAAAGTCCTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: IPNSSCDVDERECVDPGGFTTSS*SKSSEL
Trigger: CAGCTCAGAGGACTTTGACCAGGAGCTTGTCGTGAA...GCCCCCAGGGTCTACACACTCTCGTTCATCAACATCACAACTGGAATTCGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp ATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCTGCATGGTGACAGTGTaGCATTTCAGTTCTAATGTC +
Preference number: 4 (lower is better)
Translates to: MAPRICWEASRGCADPFSCMVTV*HFSSNV
Trigger: GACATTAGAACTGAAATGCCACACTGTCACCATGCA...GGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp AACCTGTCAAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGAGACACGTTCAGAAATaGGTATTTCTTTCTGACCTG +
Preference number: 4 (lower is better)
Translates to: NLSSVNPYPAEGMGCHSERHVQK*VFLSDL
Trigger: CAGGTCAGAAAGAAATACCCATTTCTGAACGTGTCT...CTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTTGACAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp ATCCCGAATTCCAGTTGTGATGTTGATGAACGAGAGTGTGTAGACCCTGGGGGCGAGACTGCCACCTGCTaGACAGCATCTTCAAACTTC +
Preference number: 4 (lower is better)
Translates to: IPNSSCDVDERECVDPGGETATC*TASSNF
Trigger: GAAGTTTGAAGATGCTGTCCAGCAGGTGGCAGTCTC...GCCCCCAGGGTCTACACACTCTCGTTCATCAACATCACAACTGGAATTCGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp GCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTAATCATTATCCAGGCTaGAAGCATGAGACTGGGATT +
Preference number: 4 (lower is better)
Translates to: AWLPAFAGRPLEAVQILFNHYPG*KHETGI
Trigger: AATCCCAGTCTCATGCTTCCAGCCTGGATAATGATT...AAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp AAGCCTTTGCCATCCAGAAATCAGACAGTTTTCCCACTGGTTTTAGATTCTTTAAGATGCAGCCCGGCCTaGGGCTGCCTCTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: KPLPSRNQTVFPLVLDSLRCSPA*GCLCCH
Trigger: GTGGCAGCAGAGGCAGCCCCAGGCCGGGCTGCATCT...TAAAGAATCTAAAACCAGTGGGAAAACTGTCTGATTTCTGGATGGCAAAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CTGTGCCGTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCACACTCGGCCAGGTTTaGAAAAAGTCTAGTTTATTG +
Preference number: 4 (lower is better)
Translates to: LCRPYLGHTCTHPGSICTTLGQV*KKSSLL
Trigger: CAATAAACTAGACTTTTTCCAAACCTGGCCGAGTGT...GGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGACGGCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGCATTGGGCACAGTCATaGGCATTTGTGGGTACTAAC +
Preference number: 4 (lower is better)
Translates to: LIWTWKTSTYVAGWVLSEHWAQS*AFVGTN
Trigger: GTTAGTACCCACAAATGCCCATGACTGTGCCCAATG...CTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CAA 72 bp CTACCTGGGACACACGTGCACACATCCAGGTTCCATTaGCACCCATCAGGCTTTACTGTTTCAGCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: LPGTHVHTSRFH*HPSGFTVSAEV
Trigger: CACTTCAGCTGAAACAGTAAAGCCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp TGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATCATTGTTCCGGGCTGTaGTCTGGGACAGCGGGTAGG +
Preference number: 4 (lower is better)
Translates to: CRLFHERNLLTLTWLFPNHCSGL*SGTAGR
Trigger: CCTACCCGCTGTCCCAGATCACAGCCCGGAACAATG...ATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAATAGCCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp CATTCCCCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAGGGATTTCGGCATCTTaGCCTCATTTGGACATGGAA +
Preference number: 4 (lower is better)
Translates to: HSPITATWANRCVFQHQPGISAS*PHLDME
Trigger: TTCCATGTCCAAATGAGGTCAAGATGCCGAAATCCC...TGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp AACCTGTCAAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGTTATGGAAAGCTTTATaGATTTGCGAGTCATCCTTG +
Preference number: 4 (lower is better)
Translates to: NLSSVNPYPAEGMGCHSELWKAL*ICESSL
Trigger: CAAGGATGACTCGCAAATTCATAAAGCTTTCCATAA...CTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTTGACAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTAAGAGGCTGTGCCTGCTaGCACCAGGTCATCAAAGCA +
Preference number: 4 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLRGCAC*HQVIKA
Trigger: TGCTTTGATGACCTGGTGGCAGCAGGCACAGCCTCT...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp GCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACTGAAGAGGCCTCTCAGGTAAGCTaGAACTTCCACTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: ADPFSQYQHPHSFCLTEEASQVS*NFHCWG
Trigger: CCCCCAACAGTGGAAGTTGCAGCTTACCTGAGAGGC...CTCTTCAGTAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp ATCCCGAATTCCAGTTGTGATGTTGATGAACGAGAGTGTGTAGACCCTGGGGGCGGACTTCACAAAAAGTaGTTTGGGGGCCAATGGGTT +
Preference number: 4 (lower is better)
Translates to: IPNSSCDVDERECVDPGGGLHKK*FGGQWV
Trigger: AACCCATTGGCCCCCAAAGCACTTTTTGTGAAGTCC...GCCCCCAGGGTCTACACACTCTCGTTCATCAACATCACAACTGGAATTCGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp TTTCGGCATCTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCCGTGGAATTCATTCTTaGCCGAGGAGATCCAGACAC +
Preference number: 4 (lower is better)
Translates to: FRHLDLIWTWKTSTYVAGRGIHS*PRRSRH
Trigger: GTGTCTGGATCTCCTCGGGCAAGAATGAATTCCACG...GCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp AGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACTTCCTTCGTGGGAGCTaGAGAAGCCAACACAAAGGC +
Preference number: 4 (lower is better)
Translates to: RLCRSFFPVPASSQFLSYFLRGS*RSQHKG
Trigger: GCCTTTGTGTTGGCTTCTGCAGCTCCCACGAAGGAA...GTAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp CCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCAGCTTTGTCTAGTTTAGAAAGCCTTTaGCATCCAGAAATCAGACAG +
Preference number: 4 (lower is better)
Translates to: PQLPGQSVWHGMCSAALSSLESL*HPEIRQ
Trigger: CTGTCTGATTTCTGGATGGCAAAGGCTTTCTAAACT...AGACAAAGCTGCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp AGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACCCACCAGCTAACTTCTaGTTACCTGGACAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: RLCRSFFPVPASSQFLSYPPANF*LPGQVA
Trigger: AGCCACCTGTCCAGGTAAGCAGAAGTTAGCTGGTGG...GTAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp AAGCCTTTGCCATCCAGAAATCAGACAGTTTTCCCACTGGTTTTAGATTCTTTATCATCTAGGGAAACCTaGGGGCTCCCGCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: KPLPSRNQTVFPLVLDSLSSRET*GLPRQP
Trigger: GGGCTGCCGCGGGAGCCCCCAGGTTTCCCTAGATGA...TAAAGAATCTAAAACCAGTGGGAAAACTGTCTGATTTCTGGATGGCAAAGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GGTGGAGGCTGTGGGTTCTGGAACGAGACAGAAACCAACATAGATGAAAGTAAGTGCTTTGGGGGCCAATaGGTTGGATGTCTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: GGGCGFWNETETNIDESKCFGGQ*VGCLPH
Trigger: ATGGGGAAGACATCCAACCCATTGGCCCCCAAAGCA...CTTACTTTCATCTATGTTGGTTTCTGTCTCGTTCCAGAACCCACAGCCTCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CTTCTCACAGCTCAGGCACCACACTCGGCCAGGTTTGGAAAAAGTCTAGTTTATCAGAGGCCTCCATGCTaGTTAGGATGTCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: LLTAQAPHSARFGKSLVYQRPPC*LGCPAL
Trigger: AAGAGCAGGACATCCTAACCAGCATGGAGGCCTCTG...ATAAACTAGACTTTTTCCAAACCTGGCCGAGTGTGGTGCCTGAGCTGTGAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACAGAGGCCTCCATGCTaGTTAGGATGTCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: EAVQILFPSTSILTVSVLQRPPC*LGCPAL
Trigger: AAGAGCAGGACATCCTAACCAGCATGGAGGCCTCTG...TAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp CTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTAGACACGTTCAGAAATaGGTATTTCTTTCTGACCTG +
Preference number: 4 (lower is better)
Translates to: LPAFAGRPLEAVQILFPSRHVQK*VFLSDL
Trigger: CAGGTCAGAAAGAAATACCCATTTCTGAACGTGTCT...ACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp GGTGGAGGCTGTGGGTTCTGGAACGAGACAGAAACCAACATAGATGAAAGTAAGCCAGAGCGTCTGGCATaGAATGTGCTCTGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: GGGCGFWNETETNIDESKPERLA*NVLCSF
Trigger: AAAGCTGCAGAGCACATTCCATGCCAGACGCTCTGG...CTTACTTTCATCTATGTTGGTTTCTGTCTCGTTCCAGAACCCACAGCCTCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp AAGCCTTTGCCATCCAGAAATCAGACAGTTTTCCCACTGGTTTTAGATTCTTTAACCCCGCAGAAGGCATaGGCTGCCACTCGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: KPLPSRNQTVFPLVLDSLTPQKA*AATRSQ
Trigger: CTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGT...TAAAGAATCTAAAACCAGTGGGAAAACTGTCTGATTTCTGGATGGCAAAGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CATTCCCCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCACCCATAACAGCCACTTaGGCAAACCGGTGTGTATTT +
Preference number: 4 (lower is better)
Translates to: HSPITATWANRCVFQHQPPITAT*ANRCVF
Trigger: AAATACACACCGGTTTGCCCAAGTGGCTGTTATGGG...TGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp AGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTTCCAGCTCTGGTTTGCGATATaGTTTCGTTTGCTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: SEEASNSTGLQFYRAGFQLWFAI*FRLLAE
Trigger: TTCAGCCAGCAAACGAAACCATATCGCAAACCAGAG...CTGGAAGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp AGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACCAACTGTGGCCTGGTTaGCTGTGTCTAGGAGATAGA +
Preference number: 4 (lower is better)
Translates to: RLCRSFFPVPASSQFLSYQLWPG*LCLGDR
Trigger: TCTATCTCCTAGACACAGTCAACCAGGCCACAGTTG...GTAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp GGTGGAGGCTGTGGGTTCTGGAACGAGACAGAAACCAACATAGATGAAAGTAAGCTGGTCAAAGTCCTCTaGGCTGATGGCGTTGAATCT +
Preference number: 4 (lower is better)
Translates to: GGGCGFWNETETNIDESKLVKVL*ADGVES
Trigger: AGATTCAACGCCATCAGCTCAGAGGACTTTGACCAG...CTTACTTTCATCTATGTTGGTTTCTGTCTCGTTCCAGAACCCACAGCCTCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp TTTCGGCATCTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCCTGTGTCATCATCAGTaGCAGCATGCCAGAGATTTG +
Preference number: 4 (lower is better)
Translates to: FRHLDLIWTWKTSTYVAGLCHHQ*QHARDL
Trigger: CAAATCTCTGGCATGCTGTCACTGATGATGACACAG...GCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp CCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCAGCTTTGTCTAAGGTTAGATCACTTTaGTTACAGAGTCCTGGTATA +
Preference number: 4 (lower is better)
Translates to: PQLPGQSVWHGMCSAALSKVRSL*LQSPGI
Trigger: TATACCAGGACTCTGTAAGCAAAGTGATCTAACCTT...AGACAAAGCTGCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp ATCCCGAATTCCAGTTGTGATGTTGATGAACGAGAGTGTGTAGACCCTGGGGGCGGAAGGGTAACTGTGTaGTATTTGGTCCATCATCTG +
Preference number: 4 (lower is better)
Translates to: IPNSSCDVDERECVDPGGGRVTV*YLVHHL
Trigger: CAGATGATGGACCAAATAGCACACAGTTACCCTTCC...GCCCCCAGGGTCTACACACTCTCGTTCATCAACATCACAACTGGAATTCGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp AAGCCTTTGCCATCCAGAAATCAGACAGTTTTCCCACTGGTTTTAGATTCTTTAGCCTTGCTAGCCTGTTaGCTGGCCCTCCGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: KPLPSRNQTVFPLVLDSLALLAC*LALRGS
Trigger: AGACCCTCGGAGGGCCAGGCAACAGGCTAGCAAGGC...TAAAGAATCTAAAACCAGTGGGAAAACTGTCTGATTTCTGGATGGCAAAGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTACCAGCAACTGTGGCCTaGTTGACTGTGTCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLPATVA*LTVSRR
Trigger: TCTCCTAGACACAGTCAACCAGGCCACAGTTGCTGG...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp AGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACTCTGTGTTCAAGGACTaGGGACTGTCCCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: RLCRSFFPVPASSQFLSYSVFKD*GLSPGN
Trigger: ATTTCCTGGGGACAGTCCCCAGTCCTTGAACACAGA...GTAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp CTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGTGCATGGTGACAGTGTaGCATTTCAGTTCTAATGTC +
Preference number: 4 (lower is better)
Translates to: LIWTWKTSTYVAGWVLSECMVTV*HFSSNV
Trigger: GACATTAGAACTGAAATGCCACACTGTCACCATGCA...CTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp AAGCCTTTGCCATCCAGAAATCAGACAGTTTTCCCACTGGTTTTAGATTCTTTATGTCCTGCTCTTGGCTaGGCTCCACGGGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: KPLPSRNQTVFPLVLDSLCPALG*APRGCL
Trigger: AAGGCAGCCCCGTGGAGCCCAGCCAAGAGCAGGACA...TAAAGAATCTAAAACCAGTGGGAAAACTGTCTGATTTCTGGATGGCAAAGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTAAGCTTCCTTCCTTCGTaGGAGCTGCAGAAGCCAACA +
Preference number: 4 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLSFLPS*ELQKPT
Trigger: TGTTGGCTTCTGCAGCTCCCACGAAGGAAGGAAGCT...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGTATGGTTTCGTTTGCTaGCTGAAGATACAGAACCAG +
Preference number: 4 (lower is better)
Translates to: LIWTWKTSTYVAGWVLSEYGFVC*LKIQNQ
Trigger: CTGGTTCTGTATCTTCAGCCAGCAAACGAAACCATA...CTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGTCCTTTTATGCCTTCTaGAAAGCTTTGCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LIWTWKTSTYVAGWVLSESFYAF*KALLLF
Trigger: GAAGAGCAGCAAAGCTTTCCAGAAGGCATAAAAGGA...CTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGACAAAACAATCCCAGTaGGGATTTGAACTGAAATCA +
Preference number: 4 (lower is better)
Translates to: VPTWDTRAHIQVPFAPIRTKQSQ*GFELKS
Trigger: TGATTTCAGTTCAAATCCCCACTGGGATTGTTTTGT...CCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGCTTAGTCATGGGCATTTGTaGGTACTAACATTATTCCTC +
Preference number: 4 (lower is better)
Translates to: PTWDTRAHIQVPFAPIRLSHGHL*VLTLFL
Trigger: GAGGAATAATGTTAGTACCCACAAATGCCCATGACT...AAGCCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
3UTR CAA 72 bp CATCTTTTGCGTGTGCTGGTTTCCAGCAGCTCTGGTTaGCGATATGGTTTCGTTTGCTGGCTGAAGATACAG +
Preference number: 4 (lower is better)
Translates to: HLLRVLVSSSSG*RYGFVCWLKIQ
Trigger: CTGTATCTTCAGCCAGCAAACGAAACCATATCGCAAACCAGAGCTGCTGGAAACCAGCACACGCAAAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp AGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTTCCAGAGTGGGGATTTGAACTaGAATCAAGCTACACCTATA +
Preference number: 4 (lower is better)
Translates to: SEEASNSTGLQFYRAGFQSGDLN*NQATPI
Trigger: TATAGGTGTAGCTTGATTTCAGTTCAAATCCCCACT...CTGGAAGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTACTCCCTTTCTCCCTCTaGTTTCTTACAGAACCACGC +
Preference number: 4 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLLPFSL*FLTEPR
Trigger: GCGTGGTTCTGTAAGAAATCAGAGGGAGAAAGGGAG...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp TGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACAAGGTTAGATCACTTTaGTTACAGAGTCCTGGTATA +
Preference number: 4 (lower is better)
Translates to: WEASRGCADPFSQYQHPHKVRSL*LQSPGI
Trigger: TATACCAGGACTCTGTAAGCAAAGTGATCTAACCTT...GTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTATGTGACAGGTGCTCCTaGTTCCACCTTCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLCDRCS*FHLLSS
Trigger: AGAAGACAGAAGGTGGAAGCAGGAGCACCTGTCACA...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp AGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACTCATCAGTGACAGCATaGCAGAGATTTGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RLCRSFFPVPASSQFLSYSSVTA*QRFVLR
Trigger: CCTCAGCACAAATCTCTGGCATGCTGTCACTGATGA...GTAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp TGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATGTTGTGGTGTGCATGTaGGTGGGTTCTCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: CRLFHERNLLTLTWLFPNVVVCM*VGSLLA
Trigger: TGCCAGGAGAGAACCCACGCACATGCACACCACAAC...ATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAATAGCCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTAGTCATCTTTTGCGTGTaGTGGTTTCCAGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLVIFCV*WFPAAL
Trigger: CAGAGCTGCTGGAAACCAGCACACGCAAAAGATGAC...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp CTTCTCACAGCTCAGGCACCACACTCGGCCAGGTTTGGAAAAAGTCTAGTTTATACAATTTCATTCCATTaGGGCTCCAAGCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LLTAQAPHSARFGKSLVYTISFH*GSKPEL
Trigger: CAGCTCTGGCTTGGAGCCCCAATGGAATGAAATTGT...ATAAACTAGACTTTTTCCAAACCTGGCCGAGTGTGGTGCCTGAGCTGTGAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GGTGGAGGCTGTGGGTTCTGGAACGAGACAGAAACCAACATAGATGAAAGTAAGGTCAGTATTTTCCTGTaGGACACCGTTCACTTCACC +
Preference number: 4 (lower is better)
Translates to: GGGCGFWNETETNIDESKVSIFL*DTVHFT
Trigger: GGTGAAGTGAACGGTGTCCCACAGGAAAATACTGAC...CTTACTTTCATCTATGTTGGTTTCTGTCTCGTTCCAGAACCCACAGCCTCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACTGAAGAGTGGCCACCGAGTGAGTaGCATGGATTATCGTCTGAA +
Preference number: 4 (lower is better)
Translates to: ADPFSQYQHPHSFCLTEEWPPSE*HGLSSE
Trigger: TTCAGACGATAATCCATGCCACTCACTCGGTGGCCA...CTCTTCAGTAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp TGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATCTCCACCTATGTGGCTaGCTGGGTCCTGTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: CRLFHERNLLTLTWLFPNLHLCG*LGPVRE
Trigger: TTCTCTGACAGGACCCAGCCAGCCACATAGGTGGAG...ATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAATAGCCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp CTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGATTTCTCCCTGGCAATaGAGATACAAGTTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: LIWTWKTSTYVAGWVLSEISPWQ*RYKLKN
Trigger: GTTTTTCAACTTGTATCTTCATTGCCAGGGAGAAAT...CTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp GCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACTGAAGAGAAGATAAACGTGGCTTaGACAGTCCCGTGGACATCA +
Preference number: 4 (lower is better)
Translates to: ADPFSQYQHPHSFCLTEEKINVA*TVPWTS
Trigger: TGATGTCCACGGGACTGTTCAAGCCACGTTTATCTT...CTCTTCAGTAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp AGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACAGCACCCAGCCTTCTTaGAAGAAACATGAAACAAGC +
Preference number: 4 (lower is better)
Translates to: RLCRSFFPVPASSQFLSYSTQPS*KKHETS
Trigger: GCTTGTTTCATGTTTCTTTCAAGAAGGCTGGGTGCT...GTAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR TCA 90 bp AGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTTCCAGAACCTGCCAAAAGTTTaGAGTTTACAACAAATACCC +
Preference number: 4 (lower is better)
Translates to: SEEASNSTGLQFYRAGFQNLPKV*SLQQIP
Trigger: GGGTATTTGTTGTAAACTTCAAACTTTTGGCAGGTT...CTGGAAGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp GCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACTGAAGAGCAGTTTCTGTCTTACTaGAGAGTGAGTTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: ADPFSQYQHPHSFCLTEEQFLSY*RVSSTS
Trigger: GCTGGTGGAACTCACTCTTCAGTAAGACAGAAACTG...CTCTTCAGTAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp GAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTATACAAGTTGAAAAACTaGAACCCTGCCAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: EAVQILFPSTSILTVSVLYKLKN*NPARGC
Trigger: ACAGCCTCTGGCAGGGTTGCAGTTTTTCAACTTGTA...TAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp AAGCCTTTGCCATCCAGAAATCAGACAGTTTTCCCACTGGTTTTAGATTCTTTATGGCAGGTTCTCCCTTaGACTGCCCTCGTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: KPLPSRNQTVFPLVLDSLWQVLP*TALVSV
Trigger: GACACTCACGAGGGCAGTGCAAGGGAGAACCTGCCA...TAAAGAATCTAAAACCAGTGGGAAAACTGTCTGATTTCTGGATGGCAAAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp GCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACTGAAGAGTCACAAAAAGTGCTTTaGGGGCCAATGGGTTGGATG +
Preference number: 4 (lower is better)
Translates to: ADPFSQYQHPHSFCLTEESQKVL*GPMGWM
Trigger: CATCCAACCCATTGGCCCCCAAAGCACTTTTTGTGA...CTCTTCAGTAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CCA 90 bp AAGCCTTTGCCATCCAGAAATCAGACAGTTTTCCCACTGGTTTTAGATTCTTTATGCCATTCAATAGAGTaGCCCCTGCTGGGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: KPLPSRNQTVFPLVLDSLCHSIE*PLLGLH
Trigger: GTGGAGCCCCAGCAGGGGCCACTCTATTGAATGGCA...TAAAGAATCTAAAACCAGTGGGAAAACTGTCTGATTTCTGGATGGCAAAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp GCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACTGAAGAGTGTCTTACTGAAGAGTaGGTTCCACCAGCTAACTTC +
Preference number: 4 (lower is better)
Translates to: ADPFSQYQHPHSFCLTEECLTEE*VPPANF
Trigger: GAAGTTAGCTGGTGGAACTCACTCTTCAGTAAGACA...CTCTTCAGTAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp TGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATGCCCATCCAGCTTTCTaGAAACTGATCTGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: CRLFHERNLLTLTWLFPNAHPAF*KLIWLE
Trigger: CTCAAGCCAGATCAGTTTGCAGAAAGCTGGATGGGC...ATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAATAGCCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp AAGCCTTTGCCATCCAGAAATCAGACAGTTTTCCCACTGGTTTTAGATTCTTTAGCCTGGGGCTGCCTCTaGTGCCACCAACTTTTACAA +
Preference number: 4 (lower is better)
Translates to: KPLPSRNQTVFPLVLDSLAWGCL*CHQLLQ
Trigger: TTGTAAAAGTTGGTGGCAGCAGAGGCAGCCCCAGGC...TAAAGAATCTAAAACCAGTGGGAAAACTGTCTGATTTCTGGATGGCAAAGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR TCA 90 bp GGTGGAGGCTGTGGGTTCTGGAACGAGACAGAAACCAACATAGATGAAAGTAAGTTTTGTGAATACCAGTaGCATCAAATCTCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: GGGCGFWNETETNIDESKFCEYQ*HQISEA
Trigger: AGCTTCGGAGATTTGATGTCACTGGTATTCACAAAA...CTTACTTTCATCTATGTTGGTTTCTGTCTCGTTCCAGAACCCACAGCCTCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp AGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACGTGCTGATTTCCACATaGCAAGCTTGTCAATTTTAC +
Preference number: 4 (lower is better)
Translates to: RLCRSFFPVPASSQFLSYVLIST*QACQFY
Trigger: GTAAAATTGACAAGCTTGGCATGTGGAAATCAGCAC...GTAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR GCA 90 bp TGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATGTGATCATAGTTCATTaGAGCCTCAAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CRLFHERNLLTLTWLFPNVIIVH*SLKLLG
Trigger: GCCCAGGAGTTTGAGGCTGCAATGAACTATGATCAC...ATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAATAGCCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp TGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATTTGCTCACGTTAACATaGCTGTTCCCAAATGCCAGG +
Preference number: 4 (lower is better)
Translates to: CRLFHERNLLTLTWLFPNLLTLT*LFPNAR
Trigger: CCTGGCATTTGGGAACAGCCATGTTAACGTGAGCAA...ATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAATAGCCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp AAGCCTTTGCCATCCAGAAATCAGACAGTTTTCCCACTGGTTTTAGATTCTTTAGTCTGGCATGGAATGTaGTCTGCAGCTTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: KPLPSRNQTVFPLVLDSLVWHGM*SAALSL
Trigger: CAGAGACAAAGCTGCAGAGCACATTCCATGCCAGAC...TAAAGAATCTAAAACCAGTGGGAAAACTGTCTGATTTCTGGATGGCAAAGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp TGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATTCGTCTGAAATAAGCTaGACTGGTCAAACACCACAT +
Preference number: 4 (lower is better)
Translates to: CRLFHERNLLTLTWLFPNSSEIS*TGQTPH
Trigger: ATGTGGTGTTTGACCAGTGCAGCTTATTTCAGACGA...ATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAATAGCCTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp TGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATGTGCTTCTTAATAGCTaGAGGCTATTTCATGAGAGG +
Preference number: 4 (lower is better)
Translates to: CRLFHERNLLTLTWLFPNVLLNS*RLFHER
Trigger: CCTCTCATGAAATAGCCTGCAGCTATTAAGAAGCAC...ATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAATAGCCTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CCA 90 bp TCTGGTGAGAAGCACATTGGGCACAGTCATGGGCATTTGTGGGTACTAACATTACTCCATCCAGGAATGTaGAACATATCTTCCTTTATT +
Preference number: 4 (lower is better)
Translates to: SGEKHIGHSHGHLWVLTLLHPGM*NISSFI
Trigger: AATAAAGGAAGATATGTTCCACATTCCTGGATGGAG...TAATGTTAGTACCCACAAATGCCCATGACTGTGCCCAATGTGCTTCTCACCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp AAGCCTTTGCCATCCAGAAATCAGACAGTTTTCCCACTGGTTTTAGATTCTTTAACGGGTTCTAAAGCTTaGCTTTCGCTGACAATGTCA +
Preference number: 4 (lower is better)
Translates to: KPLPSRNQTVFPLVLDSLTGSKA*LSLTMS
Trigger: TGACATTGTCAGCGAAAGGCAAGCTTTAGAACCCGT...TAAAGAATCTAAAACCAGTGGGAAAACTGTCTGATTTCTGGATGGCAAAGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR GCA 90 bp AAGCCTTTGCCATCCAGAAATCAGACAGTTTTCCCACTGGTTTTAGATTCTTTAGTGCTGATTTCCACATaGCAAGCTTGTCAATTTTAC +
Preference number: 4 (lower is better)
Translates to: KPLPSRNQTVFPLVLDSLVLIST*QACQFY
Trigger: GTAAAATTGACAAGCTTGGCATGTGGAAATCAGCAC...TAAAGAATCTAAAACCAGTGGGAAAACTGTCTGATTTCTGGATGGCAAAGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS TCA 90 bp CCTGGAGCCCAGGGGGCAGGAGCCCGGAGCCGCTGTCGGTGGAGTTaGGCGAGCTGCTCCTGCTCCTTGGCTCGCTGGCCACGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PGAQGAGARSRCRWS*ASCSCSLARWPRSW
Trigger: CCAGCTCCGTGGCCAGCGAGCCAAGGAGCAGGAGCAGCTCGCTCAACTCCACCGACAGCGGCTCCGGGCTCCTGCCCCCTGGGCTCCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS GCA 90 bp GCCGGGCGAGGTCTCCGTTTGGACAGCGGGCCCACACGGTCCTGGTaGTCAGCGCCAGCTGGCAGGCCTGCAACCCTGGCACATGCTCCC +
Preference number: 5 (lower is better)
Translates to: AGRGLRLDSGPTRSW*SAPAGRPATLAHAP
Trigger: GGGAGCATGTGCCAGGGTTGCAGGCCTGCCAGCTGGCGCTGAGCACCAGGACCGTGTGGGCCCGCTGTCCAAACGGAGACCTCGCCCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000561099.1
CDS GCA 90 bp GCCGGGCGAGGTCTCCGTTTGGACAGCGGGCCCACACGGTCCTGGTaGTCAGCGCCAGCTGGCAGGCCTGCAACCCTGTGGGCAGACAGG +
Preference number: 5 (lower is better)
Translates to: AGRGLRLDSGPTRSW*SAPAGRPATLWADR
Trigger: CCTGTCTGCCCACAGGGTTGCAGGCCTGCCAGCTGGCGCTGAGCACCAGGACCGTGTGGGCCCGCTGTCCAAACGGAGACCTCGCCCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559124.1
CDS CCA 90 bp ACCGCCGGGCGAGGTCTCCGTTTGGACAGCGGGCCCACACGGTCCTaGTGCTCAGCGCCAGCTGGCAGGCCTGCAACCCTGTGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: TAGRGLRLDSGPTRS*CSAPAGRPATLWAD
Trigger: GTCTGCCCACAGGGTTGCAGGCCTGCCAGCTGGCGCTGAGCACCAGGACCGTGTGGGCCCGCTGTCCAAACGGAGACCTCGCCCGGCGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559124.1
CDS CCA 90 bp GCTTCGGGAGGCAGCTGCACCGTGGAGGGCCGCGACTGTGCGCTCTaGGCGCTGACGCTGCACAGGTCCTTGCTGCTCTGGCACAGCCAC +
Preference number: 5 (lower is better)
Translates to: ASGGSCTVEGRDCAL*ALTLHRSLLLWHSH
Trigger: GTGGCTGTGCCAGAGCAGCAAGGACCTGTGCAGCGTCAGCGCCCAGAGCGCACAGTCGCGGCCCTCCACGGTGCAGCTGCCTCCCGAAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 90 bp ACCGCCGGGCGAGGTCTCCGTTTGGACAGCGGGCCCACACGGTCCTaGTGCTCAGCGCCAGCTGGCAGGCCTGCAACCCTGGCACATGCT +
Preference number: 5 (lower is better)
Translates to: TAGRGLRLDSGPTRS*CSAPAGRPATLAHA
Trigger: AGCATGTGCCAGGGTTGCAGGCCTGCCAGCTGGCGCTGAGCACCAGGACCGTGTGGGCCCGCTGTCCAAACGGAGACCTCGCCCGGCGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000561099.1
CDS TCA 90 bp GGGGCATGGCGGCCTGGCTGCTCTTCTGGGTGCCGTGCGAGTGGCTaGACGTCTTTGTCAGCCGTTGGAGGAGGTAGCCGGGCGGGCCCA +
Preference number: 5 (lower is better)
Translates to: GAWRPGCSSGCRASG*TSLSAVGGGSRAGP
Trigger: TGGGCCCGCCCGGCTACCTCCTCCAACGGCTGACAAAGACGTTCAGCCACTCGCACGGCACCCAGAAGAGCAGCCAGGCCGCCATGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000559124.1
ENST00000561099.1
CDS GCA 90 bp CATCTCGGCTTCGGGAGGCAGCTGCACCGTGGAGGGCCGCGACTGTaGGCTCTGGGCGCTGACGCTGCACAGGTCCTTGCTGCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: HLGFGRQLHRGGPRL*ALGADAAQVLAALA
Trigger: TGCCAGAGCAGCAAGGACCTGTGCAGCGTCAGCGCCCAGAGCGCACAGTCGCGGCCCTCCACGGTGCAGCTGCCTCCCGAAGCCGAGATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 90 bp GGGGTTCTTGTCTGTGACGCCGTACCGCCGGGCGAGGTCTCCGTTTaGACAGCGGGCCCACACGGTCCTGGTGCTCAGCGCCAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: GVLVCDAVPPGEVSV*TAGPHGPGAQRQLA
Trigger: TGCCAGCTGGCGCTGAGCACCAGGACCGTGTGGGCCCGCTGTCCAAACGGAGACCTCGCCCGGCGGTACGGCGTCACAGACAAGAACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000559124.1
ENST00000561099.1
CDS CCA 90 bp CCCGGAGCCGCTGTCGGTGGAGTTGAGCGAGCTGCTCCTGCTCCTTaGCTCGCTGGCCACGGAGCTGGCCATGGAAGAGCCTCTGAGCCT +
Preference number: 5 (lower is better)
Translates to: PGAAVGGVERAAPAP*LAGHGAGHGRASEP
Trigger: AGGCTCAGAGGCTCTTCCATGGCCAGCTCCGTGGCCAGCGAGCCAAGGAGCAGGAGCAGCTCGCTCAACTCCACCGACAGCGGCTCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 90 bp TGCATGCCCGTGGGGCAGCTCTTGGAGAGCGTCCTGATGAACACCTaGCCGAGGCTGTCCAGCGCCCACAGCGCATCCTGGCAGGCGGCA +
Preference number: 5 (lower is better)
Translates to: CMPVGQLLESVLMNT*PRLSSAHSASWQAA
Trigger: TGCCGCCTGCCAGGATGCGCTGTGGGCGCTGGACAGCCTCGGCCAGGTGTTCATCAGGACGCTCTCCAAGAGCTGCCCCACGGGCATGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS TCA 90 bp ACCCTGGCACATGCTCCCAGGCGGTCCCCACAGGCATCTCCTCGGTaGTCCCGGTCCGCACGTGCACGTTCCACCTGCTGTCAAGCACCC +
Preference number: 5 (lower is better)
Translates to: TLAHAPRRSPQASPR*SRSARARSTCCQAP
Trigger: GGGTGCTTGACAGCAGGTGGAACGTGCACGTGCGGACCGGGATCACCGAGGAGATGCCTGTGGGGACCGCCTGGGAGCATGTGCCAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000561099.1
CDS GCA 90 bp GGCTTGAGCAGCCCGGCGTCCTCTGCACCCAGCCGGCTCAGGTCCTaGTGGGAGCAACTAGGTCCGAGCTCTGTCACACTCGTCTCTGAG +
Preference number: 5 (lower is better)
Translates to: GLSSPASSAPSRLRS*WEQLGPSSVTLVSE
Trigger: CTCAGAGACGAGTGTGACAGAGCTCGGACCTAGTTGCTCCCAGCAGGACCTGAGCCGGCTGGGTGCAGAGGACGCCGGGCTGCTCAAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 90 bp CACCTGCTGTCAAGCACCCACAGCATCTGGTCGTTGGGGCTGGAATaGACGCTGACCAAGCTGACCCCGGCGGGCTGGAAGCGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: HLLSSTHSIWSLGLE*TLTKLTPAGWKREG
Trigger: CCCTTCCCGCTTCCAGCCCGCCGGGGTCAGCTTGGTCAGCGTCCATTCCAGCCCCAACGACCAGATGCTGTGGGTGCTTGACAGCAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561099.1
CDS-3UTR CAA 90 bp TCAAGCCCGGCCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCCCCTCCCTGTGGGCCTaGCTAGCCTGTTGCCTGGCC +
Preference number: 5 (lower is better)
Translates to: SSPASASWPERLAWNVLCPSLWA*LACCLA
Trigger: GGCCAGGCAACAGGCTAGCAAGGCCCACAGGGAGGG...GCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGGCCGGGCTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS GCA 90 bp TCCGGACAGAAGCTGCTCACGCCCTCCCGGTACAGGAGGGCCCTCTaGTCTGTCAGCGCCCACACCACATTGTTCCGGGCTGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: SGQKLLTPSRYRRAL*SVSAHTTLFRAVIW
Trigger: CCAGATCACAGCCCGGAACAATGTGGTGTGGGCGCTGACAGAGCAGAGGGCCCTCCTGTACCGGGAGGGCGTGAGCAGCTTCTGTCCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000557786.1
ENST00000558678.1
CDS GCA 90 bp CAGGCGGTCCCCACAGGCATCTCCTCGGTGATCCCGGTCCGCACGTaGACGTTCCACCTGCTGTCAAGCACCCACAGCATCTGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: QAVPTGISSVIPVRT*TFHLLSSTHSIWSL
Trigger: CAACGACCAGATGCTGTGGGTGCTTGACAGCAGGTGGAACGTGCACGTGCGGACCGGGATCACCGAGGAGATGCCTGTGGGGACCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000561099.1
CDS CCA 90 bp CACCTGCTGTCAAGCACCCACAGCATCTGGTCGTTGGGGCTGGAATaGACGCTGACCAAGCTGACCCCGGCGGGCTGGACAGGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: HLLSSTHSIWSLGLE*TLTKLTPAGWTGGS
Trigger: TGAGCCACCTGTCCAGCCCGCCGGGGTCAGCTTGGTCAGCGTCCATTCCAGCCCCAACGACCAGATGCTGTGGGTGCTTGACAGCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS CCA 90 bp GTCCGCACGTGCACGTTCCACCTGCTGTCAAGCACCCACAGCATCTaGTCGTTGGGGCTGGAATGGACGCTGACCAAGCTGACCCCGGCG +
Preference number: 5 (lower is better)
Translates to: VRTCTFHLLSSTHSI*SLGLEWTLTKLTPA
Trigger: CGCCGGGGTCAGCTTGGTCAGCGTCCATTCCAGCCCCAACGACCAGATGCTGTGGGTGCTTGACAGCAGGTGGAACGTGCACGTGCGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000561099.1
CDS-3UTR CAA 90 bp GACCCTGGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAAGCGCCCACACCACATaGTTCCGGGCTGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: DPGGMAPRICWEASRGCASAHTT*FRAVIW
Trigger: CCAGATCACAGCCCGGAACAATGTGGTGTGGGCGCT...TGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCCAGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp CAGCTCTGGAGCGGCCATTCCCCCATAACAGCCACTTGGGCAAACCGGTGTGTAGCTGCCCGGCTACCCTaGGTTCTGGGAGGCCTCCGG +
Preference number: 5 (lower is better)
Translates to: QLWSGHSPITATWANRCVAARLP*VLGGLR
Trigger: CCGGAGGCCTCCCAGAACCAAGGGTAGCCGGGCAGC...TACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATGGCCGCTCCAGAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS TCA 90 bp TGCTCCTTGGCTCGCTGGCCACGGAGCTGGCCATGGAAGAGCCTCTaGGCCTCGTCTCAGAAACTGTGGCCCCTGGCAGCTTCTCCGCTT +
Preference number: 5 (lower is better)
Translates to: CSLARWPRSWPWKSL*ASSQKLWPLAASPL
Trigger: AAGCGGAGAAGCTGCCAGGGGCCACAGTTTCTGAGACGAGGCTCAGAGGCTCTTCCATGGCCAGCTCCGTGGCCAGCGAGCCAAGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS TCA 90 bp GGGCCCTCTGCTCTGTCAGCGCCCACACCACATTGTTCCGGGCTGTaGTCTGGGACAGCGGGTAGGGACAGTCCACCTTTACGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: GPSALSAPTPHCSGL*SGTAGRDSPPLRLW
Trigger: CCAGAGCCGTAAAGGTGGACTGTCCCTACCCGCTGTCCCAGATCACAGCCCGGAACAATGTGGTGTGGGCGCTGACAGAGCAGAGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000557786.1
ENST00000558678.1
CDS GCA 90 bp CCAGCTTTCTGCAAACTGATCTGGCTTGAGCAGCCCGGCGTCCTCTaGACCCAGCCGGCTCAGGTCCTGCTGGGAGCAACTAGGTCCGAG +
Preference number: 5 (lower is better)
Translates to: PAFCKLIWLEQPGVL*TQPAQVLLGATRSE
Trigger: CTCGGACCTAGTTGCTCCCAGCAGGACCTGAGCCGGCTGGGTGCAGAGGACGCCGGGCTGCTCAAGCCAGATCAGTTTGCAGAAAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000558678.1
ENST00000560060.5
CDS CCA 90 bp TCAATCTTCCAGAGAAGGGCTCCTGAGGGCGAGACTGCCACCTGCTaGACAGCATCTTCAAACTTCTGCCAGCGCAGCCCGGCGCCCGGC +
Preference number: 5 (lower is better)
Translates to: SIFQRRAPEGETATC*TASSNFCQRSPAPG
Trigger: GCCGGGCGCCGGGCTGCGCTGGCAGAAGTTTGAAGATGCTGTCCAGCAGGTGGCAGTCTCGCCCTCAGGAGCCCTTCTCTGGAAGATTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000558678.1
ENST00000560060.5
CDS CCA 90 bp TCGTTGGGGCTGGAATGGACGCTGACCAAGCTGACCCCGGCGGGCTaGAAGCGGGAAGGGACTTTCAGGGAAGGCAGGAGTTGGGTGACA +
Preference number: 5 (lower is better)
Translates to: SLGLEWTLTKLTPAG*KREGTFREGRSWVT
Trigger: TGTCACCCAACTCCTGCCTTCCCTGAAAGTCCCTTCCCGCTTCCAGCCCGCCGGGGTCAGCTTGGTCAGCGTCCATTCCAGCCCCAACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561099.1
CDS-3UTR CAA 90 bp AACCTGTCAAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGAGCTGCTCCTGCTCCTaGGCTCGCTGGCCACGGAGC +
Preference number: 5 (lower is better)
Translates to: NLSSVNPYPAEGMGCHSESCSCS*ARWPRS
Trigger: GCTCCGTGGCCAGCGAGCCAAGGAGCAGGAGCAGCT...CTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTTGACAGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp GCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGAGCTGCTCCTGCTCCTaGGCTCGCTGGCCACGGAGC +
Preference number: 5 (lower is better)
Translates to: APRICWEASRGCADPFSQSCSCS*ARWPRS
Trigger: GCTCCGTGGCCAGCGAGCCAAGGAGCAGGAGCAGCT...CTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp CTGTTTCAGCTGAAGTGTGCTCTCCAGGAGGCGGGCAGCCTGCGCCGTGTGTGGCACAGCATCTGGTCGTaGGGGCTGGAATGGACGCTG +
Preference number: 5 (lower is better)
Translates to: LFQLKCALQEAGSLRRVWHSIWS*GLEWTL
Trigger: CAGCGTCCATTCCAGCCCCAACGACCAGATGCTGTG...CCACACACGGCGCAGGCTGCCCGCCTCCTGGAGAGCACACTTCAGCTGAAACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS GCA 90 bp GGTCCTGATGATCCAGGCCGTGTCATCGCTCAGGGCCACAAACACTaGCTGGGGCAGGGCTTCGTACCAGTGCCGCTTCCCCTTGATGGT +
Preference number: 5 (lower is better)
Translates to: GPDDPGRVIAQGHKH*LGQGFVPVPLPLDG
Trigger: ACCATCAAGGGGAAGCGGCACTGGTACGAAGCCCTGCCCCAGGCAGTGTTTGTGGCCCTGAGCGATGACACGGCCTGGATCATCAGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359520.12
ENST00000557786.1
ENST00000558678.1
ENST00000560060.5
CDS CCA 90 bp GACTGTGCGCTCTGGGCGCTGACGCTGCACAGGTCCTTGCTGCTCTaGCACAGCCACAGGAAGCTTCCTTCCTTCGTGGGAGCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: DCALWALTLHRSLLL*HSHRKLPSFVGAAE
Trigger: TTCTGCAGCTCCCACGAAGGAAGGAAGCTTCCTGTGGCTGTGCCAGAGCAGCAAGGACCTGTGCAGCGTCAGCGCCCAGAGCGCACAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS-3UTR CAA 90 bp CCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCAGCTTTGTCTTCCCCGGCGGGGTTCTaGTCTGTGACGCCGTACCGC +
Preference number: 5 (lower is better)
Translates to: PQLPGQSVWHGMCSAALSSPAGF*SVTPYR
Trigger: GCGGTACGGCGTCACAGACAAGAACCCCGCCGGGGA...AGACAAAGCTGCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp CGCCACTGCTGCAGCAATCACGCCAGCCACGGGTGGAGGCTGTGGGTTCTGGAAGCTGGGCGTCATCTTTaGCGTGTGCTGGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: RHCCSNHASHGWRLWVLEAGRHL*RVLVSS
Trigger: GCTGGAAACCAGCACACGCAAAAGATGACGCCCAGC...TTCCAGAACCCACAGCCTCCACCCGTGGCTGGCGTGATTGCTGCAGCAGTGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS GCA 90 bp TTTGTGCTGAGGTGGCCAGAGGCCTCCATGCTGGTTAGGATGTCCTaGTCTTGGCTGGGCTCCACGGGGCTGCCTTCATCAGCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: FVLRWPEASMLVRMS*SWLGSTGLPSSALV
Trigger: GACCAGAGCTGATGAAGGCAGCCCCGTGGAGCCCAGCCAAGAGCAGGACATCCTAACCAGCATGGAGGCCTCTGGCCACCTCAGCACAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 90 bp CTGATGATCCAGGCCGTGTCATCGCTCAGGGCCACAAACACTGCCTaGGGCAGGGCTTCGTACCAGTGCCGCTTCCCCTTGATGGTGACT +
Preference number: 5 (lower is better)
Translates to: LMIQAVSSLRATNTA*GRASYQCRFPLMVT
Trigger: AGTCACCATCAAGGGGAAGCGGCACTGGTACGAAGCCCTGCCCCAGGCAGTGTTTGTGGCCCTGAGCGATGACACGGCCTGGATCATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359520.12
ENST00000557786.1
ENST00000558678.1
ENST00000560060.5
CDS-3UTR CAA 90 bp ATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCCGCTGTCGGTGGAGTaGAGCGAGCTGCTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: MAPRICWEASRGCADPFSPLSVE*SELLLL
Trigger: GAGCAGGAGCAGCTCGCTCAACTCCACCGACAGCGG...GGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp GACCCTGGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCATACTGCCCAGGACACTaGAGGTCATCGACAGCAAGT +
Preference number: 5 (lower is better)
Translates to: DPGGMAPRICWEASRGCAYCPGH*RSSTAS
Trigger: ACTTGCTGTCGATGACCTCAAGTGTCCTGGGCAGTA...TGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCCAGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp GGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTGTCCGTGATGCTCACTaGCCACCAATGGTCGTCATC +
Preference number: 5 (lower is better)
Translates to: GGMAPRICWEASRGCADPVRDAH*PPMVVI
Trigger: GATGACGACCATTGGTGGCAAGTGAGCATCACGGAC...AGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp CCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCAGCTTTGTCTTGGGTGAGGAGAGCTTaGCCATCCGTGAGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: PQLPGQSVWHGMCSAALSWVRRA*PSVRRR
Trigger: CCGGCGCCTCACGGATGGCAAAGCTCTCCTCACCCA...AGACAAAGCTGCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp AAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCCAGCCCGAATACCCTCCAACGTTaGGGTTGTCTCCCTCCCCCT +
Preference number: 5 (lower is better)
Translates to: KCQPIPRRRHGLPLGASPNTLQR*GCLPPP
Trigger: AGGGGGAGGGAGACAACCCAAACGTTGGAGGGTATT...CGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS GCA 90 bp CTGAGCCTCGTCTCAGAAACTGTGGCCCCTGGCAGCTTCTCCGCTTaGTGCACGTGGACACGCTCTGAGCATCCAGACATCTCCAGACCA +
Preference number: 5 (lower is better)
Translates to: LSLVSETVAPGSFSA*CTWTRSEHPDISRP
Trigger: TGGTCTGGAGATGTCTGGATGCTCAGAGCGTGTCCACGTGCAGCAAGCGGAGAAGCTGCCAGGGGCCACAGTTTCTGAGACGAGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS GCA 90 bp CATCTTCAAACTTCTGCCAGCGCAGCCCGGCGCCCGGCAACGCGCTaGAGAACAGGCCGCCTTTGTAGTCCAGGCACCAGATATACTTCT +
Preference number: 5 (lower is better)
Translates to: HLQTSASAARRPATR*RTGRLCSPGTRYTS
Trigger: AGAAGTATATCTGGTGCCTGGACTACAAAGGCGGCCTGTTCTGCAGCGCGTTGCCGGGCGCCGGGCTGCGCTGGCAGAAGTTTGAAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000558678.1
ENST00000560060.5
CDS-3UTR CAA 90 bp GCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGCTGCAACTTCCACTGTaGGGGGATTCCAGACGCGGG +
Preference number: 5 (lower is better)
Translates to: APRICWEASRGCADPFSQLQLPL*GDSRRG
Trigger: CCCGCGTCTGGAATCCCCCAACAGTGGAAGTTGCAG...CTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTCCGCTGTCGGTGGAGTaGAGCGAGCTGCTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: GTVRRHQTAQVCSSTELAPLSVE*SELLLL
Trigger: GAGCAGGAGCAGCTCGCTCAACTCCACCGACAGCGG...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp AAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCCAGCCCGTACTGCCCAGGACACTaGAGGTCATCGACAGCAAGT +
Preference number: 5 (lower is better)
Translates to: KCQPIPRRRHGLPLGASPYCPGH*RSSTAS
Trigger: ACTTGCTGTCGATGACCTCAAGTGTCCTGGGCAGTA...CGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp CAGCTCTGGAGCGGCCATTCCCCCATAACAGCCACTTGGGCAAACCGGTGTGTACTGGCAGGTTCTCCCTaGCACTGCCCTCGTGAGTGT +
Preference number: 5 (lower is better)
Translates to: QLWSGHSPITATWANRCVLAGSP*HCPREC
Trigger: ACACTCACGAGGGCAGTGCAAGGGAGAACCTGCCAG...TACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATGGCCGCTCCAGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS GCA 90 bp AGCCTCGTCTCAGAAACTGTGGCCCCTGGCAGCTTCTCCGCTTGCTaGACGTGGACACGCTCTGAGCATCCAGACATCTCCAGACCATCT +
Preference number: 5 (lower is better)
Translates to: SLVSETVAPGSFSAC*TWTRSEHPDISRPS
Trigger: AGATGGTCTGGAGATGTCTGGATGCTCAGAGCGTGTCCACGTGCAGCAAGCGGAGAAGCTGCCAGGGGCCACAGTTTCTGAGACGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS GCA 90 bp GTCAATTTTACAGCTCCTAGCTGGGAGAGGTCCAGCCTGGTCCAGTaGATGCCCGTGGGGCAGCTCTTGGAGAGCGTCCTGATGAACACC +
Preference number: 5 (lower is better)
Translates to: VNFTAPSWERSSLVQ*MPVGQLLESVLMNT
Trigger: GGTGTTCATCAGGACGCTCTCCAAGAGCTGCCCCACGGGCATGCACTGGACCAGGCTGGACCTCTCCCAGCTAGGAGCTGTAAAATTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 90 bp GCTGACCCCGGCGGGCTGGACAGGTGGCTCAATCATTATCCAGGCTaGAAGCATGAGACTGGGATTGAGAGGCTGAGTCCCTACACGGAA +
Preference number: 5 (lower is better)
Translates to: ADPGGLDRWLNHYPG*KHETGIERLSPYTE
Trigger: TTCCGTGTAGGGACTCAGCCTCTCAATCCCAGTCTCATGCTTCCAGCCTGGATAATGATTGAGCCACCTGTCCAGCCCGCCGGGGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTCTTTTCTACGGGGGCTaGGGCTGCTGTGGCCACCGA +
Preference number: 5 (lower is better)
Translates to: GTVRRHQTAQVCSSTELALFYGG*GCCGHR
Trigger: TCGGTGGCCACAGCAGCCCAAGCCCCCGTAGAAAAG...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp GCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGCAGACACCGCTGTTATaGACCCCGAGAAGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: APRICWEASRGCADPFSQQTPLL*TPRRLG
Trigger: GCCAAGCCTTCTCGGGGTCAATAACAGCGGTGTCTG...CTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp CCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGCTTGGTGGGCACTGCCCATaGTCTGAAGGGGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: PTWDTRAHIQVPFAPIRLGGHCP*SEGATA
Trigger: TGCTGTGGCCCCTTCAGACAATGGGCAGTGCCCACC...AAGCCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp CTGTGCCGTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCCTCCAACGTTTGGGTaGTCTCCCTCCCCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: LCRPYLGHTCTHPGSICTPPTFG*SPSPFS
Trigger: AGAGAAGGGGGAGGGAGACAACCCAAACGTTGGAGG...GGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGACGGCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS TCA 90 bp ATCCAGACACCGCTGTTATTGACCCCGAGAAGGCTTGGCTGGCACTaGAGCTGCTGGGACCAAAACGCCATGCGCAGCTTATCTGCCACC +
Preference number: 5 (lower is better)
Translates to: IQTPLLLTPRRLGWH*SCWDQNAMRSLSAT
Trigger: GGTGGCAGATAAGCTGCGCATGGCGTTTTGGTCCCAGCAGCTTCAGTGCCAGCCAAGCCTTCTCGGGGTCAATAACAGCGGTGTCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 90 bp GTCTCAGAAACTGTGGCCCCTGGCAGCTTCTCCGCTTGCTGCACGTaGACACGCTCTGAGCATCCAGACATCTCCAGACCATCTCTCACT +
Preference number: 5 (lower is better)
Translates to: VSETVAPGSFSACCT*TRSEHPDISRPSLT
Trigger: AGTGAGAGATGGTCTGGAGATGTCTGGATGCTCAGAGCGTGTCCACGTGCAGCAAGCGGAGAAGCTGCCAGGGGCCACAGTTTCTGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 90 bp AGGATGAAGAAGGAAGCCCGTGGGCATAGATGTCCTCCTCATCGCTaGACGTCAATGTCTGATCCCGTGGAGGCTGCTCAAGCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: RMKKEARGHRCPPHR*TSMSDPVEAAQARA
Trigger: AGCCCTGGCTTGAGCAGCCTCCACGGGATCAGACATTGACGTCCAGCGATGAGGAGGACATCTATGCCCACGGGCTTCCTTCTTCATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS-3UTR CAA 90 bp CTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGTGGCAGCTTCTCCGCTaGCTGCACGTGGACACGCTC +
Preference number: 5 (lower is better)
Translates to: LIWTWKTSTYVAGWVLSEWQLLR*LHVDTL
Trigger: GAGCGTGTCCACGTGCAGCAAGCGGAGAAGCTGCCA...CTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp GGGGGCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTGTAACTGTGTGCTATTaGGTCCATCATCTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: GGMAPRICWEASRGCADPVTVCY*VHHLQD
Trigger: GTCCTGCAGATGATGGACCAAATAGCACACAGTTAC...AGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp AACCTGTCAAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGGTCCGTGATGCTCACTaGCCACCAATGGTCGTCATC +
Preference number: 5 (lower is better)
Translates to: NLSSVNPYPAEGMGCHSEVRDAH*PPMVVI
Trigger: GATGACGACCATTGGTGGCAAGTGAGCATCACGGAC...CTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTTGACAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp TCAAGCCCGGCCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCACGTGGAATTCATTCTaGCCCGAGGAGATCCAGACA +
Preference number: 5 (lower is better)
Translates to: SSPASASWPERLAWNVLCTWNSF*PEEIQT
Trigger: TGTCTGGATCTCCTCGGGCAAGAATGAATTCCACGT...GCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGGCCGGGCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp CTGTTTCAGCTGAAGTGTGCTCTCCAGGAGGCGGGCAGCCTGCGCCGTGTGTGGTGTGATCATAGTTCATaGCAGCCTCAAACTCCTGGG +
Preference number: 5 (lower is better)
Translates to: LFQLKCALQEAGSLRRVWCDHSS*QPQTPG
Trigger: CCCAGGAGTTTGAGGCTGCAATGAACTATGATCACA...CCACACACGGCGCAGGCTGCCCGCCTCCTGGAGAGCACACTTCAGCTGAAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS CCA 90 bp CCCAGGACACTTGAGGTCATCGACAGCAAGTCTGTGTTCAAGGACTaGGGACTGTCCCCAGGAAATTCGGAGCAGGGTGTCGATTCCAGG +
Preference number: 5 (lower is better)
Translates to: PRTLEVIDSKSVFKD*GLSPGNSEQGVDSR
Trigger: CCTGGAATCGACACCCTGCTCCGAATTTCCTGGGGACAGTCCCCAGTCCTTGAACACAGACTTGCTGTCGATGACCTCAAGTGTCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS-3UTR CAA 90 bp CTGTGCCGTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCTACTTCCTCATCTGGTaGAGGTGCCGGCAGTACAGA +
Preference number: 5 (lower is better)
Translates to: LCRPYLGHTCTHPGSICTYFLIW*RCRQYR
Trigger: TCTGTACTGCCGGCACCTCAACCAGATGAGGAAGTA...GGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGACGGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp CCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCAGCTTTGTCTTCTGAGCTGATGGCGTaGAATCTCTGTGACAGGGGC +
Preference number: 5 (lower is better)
Translates to: PQLPGQSVWHGMCSAALSSELMA*NLCDRG
Trigger: GCCCCTGTCACAGAGATTCAACGCCATCAGCTCAGA...AGACAAAGCTGCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp CTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTTTGGGGGCCAATGGGTaGGATGTCTTCCCCATCATG +
Preference number: 5 (lower is better)
Translates to: LPAFAGRPLEAVQILFPSLGANG*DVFPIM
Trigger: CATGATGGGGAAGACATCCAACCCATTGGCCCCCAA...ACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp TTTCGGCATCTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCCGTCTTTGTCAGCCGTaGGAGGAGGTAGCCGGGCGG +
Preference number: 5 (lower is better)
Translates to: FRHLDLIWTWKTSTYVAGRLCQP*EEVAGR
Trigger: CCGCCCGGCTACCTCCTCCAACGGCTGACAAAGACG...GCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp CTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGGTGTCTGGACAAGTGTaGAGGCAGCGCGTCCACCAG +
Preference number: 5 (lower is better)
Translates to: LIWTWKTSTYVAGWVLSEVSGQV*RQRVHQ
Trigger: CTGGTGGACGCGCTGCCTCAACACTTGTCCAGACAC...CTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp TTTCGGCATCTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCCTAAGTGAGCGACCCTaGCTCAGCTCCCCCACGCCC +
Preference number: 5 (lower is better)
Translates to: FRHLDLIWTWKTSTYVAGLSERP*LSSPTP
Trigger: GGGCGTGGGGGAGCTGAGCAAGGGTCGCTCACTTAG...GCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS TCA 90 bp CTTTGTAGTCCAGGCACCAGATATACTTCTCGGAGACCACCAAGCTaGGGATGCCATAGCCGGGACCCGAGTAGCCCATCCAGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: LCSPGTRYTSRRPPS*GCHSRDPSSPSSFL
Trigger: CAGAAAGCTGGATGGGCTACTCGGGTCCCGGCTATGGCATCCTCAGCTTGGTGGTCTCCGAGAAGTATATCTGGTGCCTGGACTACAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000558678.1
ENST00000560060.5
CDS GCA 90 bp CATGCGCCCCAGGAGAGCTGTCCTGTTCTTGGAAGGGTAACTGTGTaGTATTTGGTCCATCATCTGCAGGACACGGCTCATCTCCGAGTC +
Preference number: 5 (lower is better)
Translates to: HAPQESCPVLGRVTV*YLVHHLQDTAHLRV
Trigger: GACTCGGAGATGAGCCGTGTCCTGCAGATGATGGACCAAATAGCACACAGTTACCCTTCCAAGAACAGGACAGCTCTCCTGGGGCGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 90 bp TGCGCAGCTTATCTGCCACCTTTTCTACGGGGGCTTGGGCTGCTGTaGCCACCGAGTGAGTGGCATGGATTATCGTCTGAAATAAGCTGC +
Preference number: 5 (lower is better)
Translates to: CAAYLPPFLRGLGLL*PPSEWHGLSSEISC
Trigger: GCAGCTTATTTCAGACGATAATCCATGCCACTCACTCGGTGGCCACAGCAGCCCAAGCCCCCGTAGAAAAGGTGGCAGATAAGCTGCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS-3UTR CAA 90 bp TGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACTCTGAGCTGATGGCGTaGAATCTCTGTGACAGGGGC +
Preference number: 5 (lower is better)
Translates to: WEASRGCADPFSQYQHPHSELMA*NLCDRG
Trigger: GCCCCTGTCACAGAGATTCAACGCCATCAGCTCAGA...GTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp CCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGCTTCAGTGCCGCTTCCCCTaGATGGTGACTTTCCCACAA +
Preference number: 5 (lower is better)
Translates to: PTWDTRAHIQVPFAPIRLQCRFP*MVTFPQ
Trigger: TTGTGGGAAAGTCACCATCAAGGGGAAGCGGCACTG...AAGCCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp CGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCAGTGCCGCTTCCCCTaGATGGTGACTTTCCCACAA +
Preference number: 5 (lower is better)
Translates to: RICWEASRGCADPFSQYQQCRFP*MVTFPQ
Trigger: TTGTGGGAAAGTCACCATCAAGGGGAAGCGGCACTG...CTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp CTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGCAGACACCGCTGTTATaGACCCCGAGAAGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: LIWTWKTSTYVAGWVLSEQTPLL*TPRRLG
Trigger: GCCAAGCCTTCTCGGGGTCAATAACAGCGGTGTCTG...CTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp ATGCCCCGCCCCCGCCGCTCCTTAAGCGCATCTGAGATGCCCTCTCCATTCTGCTTCCACATGCCAAGCTaGTCAATTTTACAGCTCCTA +
Preference number: 5 (lower is better)
Translates to: MPRPRRSLSASEMPSPFCFHMPS*SILQLL
Trigger: TAGGAGCTGTAAAATTGACAAGCTTGGCATGTGGAA...GCAGAATGGAGAGGGCATCTCAGATGCGCTTAAGGAGCGGCGGGGGCGGGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp TGGCACATGGTGTGTCCTGCTGCTGTGCTGGGCGTCATCTTTTGCGTGTGCTGGATTTGCGAGTCATCCTaGTGCAGGGGCCATGCTAAT +
Preference number: 5 (lower is better)
Translates to: WHMVCPAAVLGVIFCVCWICESS*CRGHAN
Trigger: ATTAGCATGGCCCCTGCACAAGGATGACTCGCAAAT...CCAGCACACGCAAAAGATGACGCCCAGCACAGCAGCAGGACACACCATGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp AAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGCCAGCCCGTTTCATGAGAGGAATTaGCTCACGTTAACATGGCTG +
Preference number: 5 (lower is better)
Translates to: KCQPIPRRRHGLPLGASPFHERN*LTLTWL
Trigger: CAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAA...CGGGCTGGCTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS GCA 90 bp GCCTCCCACATCTTCCCTCGCTCCATTGAGCAGCTCCCGCCCATGTaGATGGTGACAGTGTGGCATTTCAGTTCTAATGTCATCTTCCTC +
Preference number: 5 (lower is better)
Translates to: ASHIFPRSIEQLPPM*MVTVWHFSSNVIFL
Trigger: GAGGAAGATGACATTAGAACTGAAATGCCACACTGTCACCATGCACATGGGCGGGAGCTGCTCAATGGAGCGAGGGAAGATGTGGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 90 bp CCACCTTTTCTACGGGGGCTTGGGCTGCTGTGGCCACCGAGTGAGTaGCATGGATTATCGTCTGAAATAAGCTGCACTGGTCAAACACCA +
Preference number: 5 (lower is better)
Translates to: PPFLRGLGLLWPPSE*HGLSSEISCTGQTP
Trigger: TGGTGTTTGACCAGTGCAGCTTATTTCAGACGATAATCCATGCCACTCACTCGGTGGCCACAGCAGCCCAAGCCCCCGTAGAAAAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS-3UTR CAA 90 bp CTGTGCCGTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCGTCTTCCCCTCAAAGTaGTACTTCCTCATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: LCRPYLGHTCTHPGSICTVFPSK*YFLIWL
Trigger: CAACCAGATGAGGAAGTACAACTTTGAGGGGAAGAC...GGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGACGGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp AACCTGTCAAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGAAAGAGCAGACTTCTTaGCAGAGTAGAGACCAGCAG +
Preference number: 5 (lower is better)
Translates to: NLSSVNPYPAEGMGCHSEKEQTS*QSRDQQ
Trigger: CTGCTGGTCTCTACTCTGCAAAGAAGTCTGCTCTTT...CTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTTGACAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp AGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACTGGCAGCTTCTCCGCTaGCTGCACGTGGACACGCTC +
Preference number: 5 (lower is better)
Translates to: RLCRSFFPVPASSQFLSYWQLLR*LHVDTL
Trigger: GAGCGTGTCCACGTGCAGCAAGCGGAGAAGCTGCCA...GTAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp TTTCGGCATCTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTCTTCCCTCGCTCCATaGAGCAGCTCCCGCCCATGT +
Preference number: 5 (lower is better)
Translates to: FRHLDLIWTWKTSTYVAGSSLAP*SSSRPC
Trigger: ACATGGGCGGGAGCTGCTCAATGGAGCGAGGGAAGA...GCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp CTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACGTGGAATTCATTCTaGCCCGAGGAGATCCAGACA +
Preference number: 5 (lower is better)
Translates to: LPAFAGRPLEAVQILFPSTWNSF*PEEIQT
Trigger: TGTCTGGATCTCCTCGGGCAAGAATGAATTCCACGT...ACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp CCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGCTTCTGGTGAGAAGCACATaGGGCACAGTCATGGGCATT +
Preference number: 5 (lower is better)
Translates to: PTWDTRAHIQVPFAPIRLLVRST*GTVMGI
Trigger: AATGCCCATGACTGTGCCCAATGTGCTTCTCACCAG...AAGCCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp GTCCTGTCAGAGAACATATTTTATCACCCTCCACCTGCGGCCTGGGGGCTCCCTCAGTGCTGTGTGACCTaGAGCAAGTTACCTAACCTC +
Preference number: 5 (lower is better)
Translates to: VLSENIFYHPPPAAWGLPQCCVT*SKLPNL
Trigger: GAGGTTAGGTAACTTGCTCAAGGTCACACAGCACTG...AGGGAGCCCCCAGGCCGCAGGTGGAGGGTGATAAAATATGTTCTCTGACAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp ACCTGGCCAGAGGTGTCTGGACAAGTGTTGAGGCAGCGCGTCCACCAGGGAGTCGGCGCACTCCTCTTATaGTTGTATAGGTTTTTAAGG +
Preference number: 5 (lower is better)
Translates to: TWPEVSGQVLRQRVHQGVGALLL*LYRFLR
Trigger: CCTTAAAAACCTATACAACAATAAGAGGAGTGCGCC...GACTCCCTGGTGGACGCGCTGCCTCAACACTTGTCCAGACACCTCTGGCCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS CCA 90 bp CCTCGCTCCATTGAGCAGCTCCCGCCCATGTGCATGGTGACAGTGTaGCATTTCAGTTCTAATGTCATCTTCCTCAGCCAGAGAATCAGG +
Preference number: 5 (lower is better)
Translates to: PRSIEQLPPMCMVTV*HFSSNVIFLSQRIR
Trigger: CCTGATTCTCTGGCTGAGGAAGATGACATTAGAACTGAAATGCCACACTGTCACCATGCACATGGGCGGGAGCTGCTCAATGGAGCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 90 bp TGGATGTCTTCCCCATCATGCGCCCCAGGAGAGCTGTCCTGTTCTTaGAAGGGTAACTGTGTGCTATTTGGTCCATCATCTGCAGGACAC +
Preference number: 5 (lower is better)
Translates to: WMSSPSCAPGELSCS*KGNCVLFGPSSAGH
Trigger: GTGTCCTGCAGATGATGGACCAAATAGCACACAGTTACCCTTCCAAGAACAGGACAGCTCTCCTGGGGCGCATGATGGGGAAGACATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS-3UTR CAA 90 bp CTTCTCACAGCTCAGGCACCACACTCGGCCAGGTTTGGAAAAAGTCTAGTTTATCTGCAACTTCCACTGTaGGGGGATTCCAGACGCGGG +
Preference number: 5 (lower is better)
Translates to: LLTAQAPHSARFGKSLVYLQLPL*GDSRRG
Trigger: CCCGCGTCTGGAATCCCCCAACAGTGGAAGTTGCAG...ATAAACTAGACTTTTTCCAAACCTGGCCGAGTGTGGTGCCTGAGCTGTGAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp GTCCCTACCTGGGACACACGTGCACACATCCAGGTTCCATTTGCACCCATCAGGGACCATCTCTCACTGTaGATGTTAATCCTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: VPTWDTRAHIQVPFAPIRDHLSL*MLILQA
Trigger: GGCCTGAAGGATTAACATCAACAGTGAGAGATGGTC...CCTGATGGGTGCAAATGGAACCTGGATGTGTGCACGTGTGTCCCAGGTAGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp GAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTATCTTCCCTCGCTCCATaGAGCAGCTCCCGCCCATGT +
Preference number: 5 (lower is better)
Translates to: EAVQILFPSTSILTVSVLSSLAP*SSSRPC
Trigger: ACATGGGCGGGAGCTGCTCAATGGAGCGAGGGAAGA...TAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp CTTCTCACAGCTCAGGCACCACACTCGGCCAGGTTTGGAAAAAGTCTAGTTTATAGCGCCCACACCACATaGTTCCGGGCTGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: LLTAQAPHSARFGKSLVYSAHTT*FRAVIW
Trigger: CCAGATCACAGCCCGGAACAATGTGGTGTGGGCGCT...ATAAACTAGACTTTTTCCAAACCTGGCCGAGTGTGGTGCCTGAGCTGTGAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp GCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACTGAAGAGCTTTTCTACGGGGGCTaGGGCTGCTGTGGCCACCGA +
Preference number: 5 (lower is better)
Translates to: ADPFSQYQHPHSFCLTEELFYGG*GCCGHR
Trigger: TCGGTGGCCACAGCAGCCCAAGCCCCCGTAGAAAAG...CTCTTCAGTAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp AGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTTCCAGCCCCATAACAGCCACTaGGGCAAACCGGTGTGTATT +
Preference number: 5 (lower is better)
Translates to: SEEASNSTGLQFYRAGFQPHNSH*GKPVCI
Trigger: AATACACACCGGTTTGCCCAAGTGGCTGTTATGGGG...CTGGAAGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS TCA 90 bp TCACCATTGAAGCTGCTTTCCTGGTCTGGAGACTCTGCACTTAACTaGTCCACGCTACTGCCCAGGACACTTGAGGTCATCGACAGCAAG +
Preference number: 5 (lower is better)
Translates to: SPLKLLSWSGDSALN*STLLPRTLEVIDSK
Trigger: CTTGCTGTCGATGACCTCAAGTGTCCTGGGCAGTAGCGTGGATCAGTTAAGTGCAGAGTCTCCAGACCAGGAAAGCAGCTTCAATGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS TCA 90 bp ACATCTTCCCTCGCTCCATTGAGCAGCTCCCGCCCATGTGCATGGTaGCAGTGTGGCATTTCAGTTCTAATGTCATCTTCCTCAGCCAGA +
Preference number: 5 (lower is better)
Translates to: TSSLAPLSSSRPCAW*QCGISVLMSSSSAR
Trigger: TCTGGCTGAGGAAGATGACATTAGAACTGAAATGCCACACTGTCACCATGCACATGGGCGGGAGCTGCTCAATGGAGCGAGGGAAGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS GCA 90 bp TGCTTTCCTGGTCTGGAGACTCTGCACTTAACTGATCCACGCTACTaGCCAGGACACTTGAGGTCATCGACAGCAAGTCTGTGTTCAAGG +
Preference number: 5 (lower is better)
Translates to: CFPGLETLHLTDPRY*PGHLRSSTASLCSR
Trigger: CCTTGAACACAGACTTGCTGTCGATGACCTCAAGTGTCCTGGGCAGTAGCGTGGATCAGTTAAGTGCAGAGTCTCCAGACCAGGAAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS-3UTR CAA 90 bp TCAAGCCCGGCCTCAGCTTCCTGGCCAGAGCGTCTGGCATGGAATGTGCTCTGCAAAAGGAATGTTTATTaGTCATCTAGGGAAACCTGG +
Preference number: 5 (lower is better)
Translates to: SSPASASWPERLAWNVLCKRNVY*SSRETW
Trigger: CCAGGTTTCCCTAGATGACAAATAAACATTCCTTTT...GCAGAGCACATTCCATGCCAGACGCTCTGGCCAGGAAGCTGAGGCCGGGCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp GCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTTCCCAGTACTTTTCCTaGGTTGTGTTCCAATTTGCC +
Preference number: 5 (lower is better)
Translates to: AWLPAFAGRPLEAVQILFSQYFS*VVFQFA
Trigger: GGCAAATTGGAACACAACCAAGGAAAAGTACTGGGA...AAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp CGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTACCAGGACCATCTCTCACTGTaGATGTTAATCCTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: RICWEASRGCADPFSQYQDHLSL*MLILQA
Trigger: GGCCTGAAGGATTAACATCAACAGTGAGAGATGGTC...CTGGTACTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp AACCTGTCAAGTGTCAACCCATACCCCGCAGAAGGCATGGGCTGCCACTCGGAGTTCTTCCTTTTCACTTaGATAGGCTTCACGACAAGC +
Preference number: 5 (lower is better)
Translates to: NLSSVNPYPAEGMGCHSEFFLFT*IGFTTS
Trigger: GCTTGTCGTGAAGCCTATCAAAGTGAAAAGGAAGAA...CTCCGAGTGGCAGCCCATGCCTTCTGCGGGGTATGGGTTGACACTTGACAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp GCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCCAGTTCTTCCTTTTCACTTaGATAGGCTTCACGACAAGC +
Preference number: 5 (lower is better)
Translates to: APRICWEASRGCADPFSQFFLFT*IGFTTS
Trigger: GCTTGTCGTGAAGCCTATCAAAGTGAAAAGGAAGAA...CTGGGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp CCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAGGCCAGGTAACTGTGTGCTATTaGGTCCATCATCTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: PITATWANRCVFQHQPGQVTVCY*VHHLQD
Trigger: GTCCTGCAGATGATGGACCAAATAGCACACAGTTAC...CTGGCCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp GCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTATGGTCGTCATCTCCTaGGGGCTTCTTGGAAATAAT +
Preference number: 5 (lower is better)
Translates to: AWLPAFAGRPLEAVQILFMVVIS*GLLGNN
Trigger: ATTATTTCCAAGAAGCCCCAAGGAGATGACGACCAT...AAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp AAGCCTTTGCCATCCAGAAATCAGACAGTTTTCCCACTGGTTTTAGATTCTTTAGGGCGAGGTCTCCGTTaGGACAGCGGGCCCACACGG +
Preference number: 5 (lower is better)
Translates to: KPLPSRNQTVFPLVLDSLGRGLR*DSGPTR
Trigger: CCGTGTGGGCCCGCTGTCCAAACGGAGACCTCGCCC...TAAAGAATCTAAAACCAGTGGGAAAACTGTCTGATTTCTGGATGGCAAAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp GGGACAGTGAGGAGGCATCAAACAGCACAGGTCTGCAGTTCTACAGAGCTGGCTTGGGATTTCGGCATCTaGACCTCATTTGGACATGGA +
Preference number: 5 (lower is better)
Translates to: GTVRRHQTAQVCSSTELAWDFGI*TSFGHG
Trigger: TCCATGTCCAAATGAGGTCAAGATGCCGAAATCCCA...AGCCAGCTCTGTAGAACTGCAGACCTGTGCTGTTTGATGCCTCCTCACTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp CTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGGTCCTGTCAGAGTCCAGCAGCTCTGGTTaGCGATATGGTTTCGTTTGC +
Preference number: 5 (lower is better)
Translates to: LIWTWKTSTYVAGWVLSESSSSG*RYGFVC
Trigger: GCAAACGAAACCATATCGCAAACCAGAGCTGCTGGA...CTCTGACAGGACCCAGCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS GCA 90 bp CAGGAAATTCGGAGCAGGGTGTCGATTCCAGGGAGCTGTGACAGGTaGTCCTGCTTCCACCTTCTGTCTTCTTCTTCTTCTTCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: QEIRSRVSIPGSCDR*SCFHLLSSSSSSSF
Trigger: AAAGGAAGAAGAAGAAGAAGAAGACAGAAGGTGGAAGCAGGAGCACCTGTCACAGCTCCCTGGAATCGACACCCTGCTCCGAATTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 90 bp CTAACTTCTGCTTACCTGGACAGGTGGCTCAATCATTATCCAGGCTaGAAGCATGAGACTGGGATTGAGAGGCTGAGTCCCTACACGGAA +
Preference number: 5 (lower is better)
Translates to: LTSAYLDRWLNHYPG*KHETGIERLSPYTE
Trigger: TTCCGTGTAGGGACTCAGCCTCTCAATCCCAGTCTCATGCTTCCAGCCTGGATAATGATTGAGCCACCTGTCCAGGTAAGCAGAAGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp GCATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTTTCCACATGCCAAGCTaGTCAATTTTACAGCTCCTA +
Preference number: 5 (lower is better)
Translates to: AWLPAFAGRPLEAVQILFFHMPS*SILQLL
Trigger: TAGGAGCTGTAAAATTGACAAGCTTGGCATGTGGAA...AAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCATGC
51% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp CAGCTCTGGAGCGGCCATTCCCCCATAACAGCCACTTGGGCAAACCGGTGTGTACTTGTCCTATCACTTTaGAGTTTAGAAAGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: QLWSGHSPITATWANRCVLVLSL*SLESLC
Trigger: GCAAAGGCTTTCTAAACTCAAAAGTGATAGGACAAG...TACACACCGGTTTGCCCAAGTGGCTGTTATGGGGGAATGGCCGCTCCAGAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS TCA 90 bp AATCTCCGAAGCTGTTTATTTCTCCCTGGCAATGAAGATACAAGTTaGAAAACTGCAACCCTGCCAGAGGCTGTGCCTGCTGCCACCAGG +
Preference number: 5 (lower is better)
Translates to: NLRSCLFLPGNEDTS*KTATLPEAVPAATR
Trigger: CCTGGTGGCAGCAGGCACAGCCTCTGGCAGGGTTGCAGTTTTTCAACTTGTATCTTCATTGCCAGGGAGAAATAAACAGCTTCGGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000558678.1
ENST00000561228.1
CDS GCA 90 bp TATTTCTCCCTGGCAATGAAGATACAAGTTGAAAAACTGCAACCCTaGCAGAGGCTGTGCCTGCTGCCACCAGGTCATCAAAGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: YFSLAMKIQVEKLQP*QRLCLLPPGHQSSS
Trigger: TGAGCTGCTTTGATGACCTGGTGGCAGCAGGCACAGCCTCTGGCAGGGTTGCAGTTTTTCAACTTGTATCTTCATTGCCAGGGAGAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000558678.1
ENST00000561228.1
CDS GCA 90 bp ATTCGGAGCAGGGTGTCGATTCCAGGGAGCTGTGACAGGTGCTCCTaGTTCCACCTTCTGTCTTCTTCTTCTTCTTCTTCCTTTTCACTT +
Preference number: 5 (lower is better)
Translates to: IRSRVSIPGSCDRCS*FHLLSSSSSSSFSL
Trigger: AAGTGAAAAGGAAGAAGAAGAAGAAGAAGACAGAAGGTGGAAGCAGGAGCACCTGTCACAGCTCCCTGGAATCGACACCCTGCTCCGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 90 bp CTGAAGAGTGAGTTCCACCAGCTAACTTCTGCTTACCTGGACAGGTaGCTCAATCATTATCCAGGCTGGAAGCATGAGACTGGGATTGAG +
Preference number: 5 (lower is better)
Translates to: LKSEFHQLTSAYLDR*LNHYPGWKHETGIE
Trigger: CTCAATCCCAGTCTCATGCTTCCAGCCTGGATAATGATTGAGCCACCTGTCCAGGTAAGCAGAAGTTAGCTGGTGGAACTCACTCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp AGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACTACTTCCTCATCTGGTaGAGGTGCCGGCAGTACAGA +
Preference number: 5 (lower is better)
Translates to: RLCRSFFPVPASSQFLSYYFLIW*RCRQYR
Trigger: TCTGTACTGCCGGCACCTCAACCAGATGAGGAAGTA...GTAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp CCCATAACAGCCACTTGGGCAAACCGGTGTGTATTTCAACACCAGCCAGGCCAGGAGTTTAGAAAGCCTTaGCCATCCAGAAATCAGACA +
Preference number: 5 (lower is better)
Translates to: PITATWANRCVFQHQPGQEFRKP*PSRNQT
Trigger: TGTCTGATTTCTGGATGGCAAAGGCTTTCTAAACTC...CTGGCCTGGCTGGTGTTGAAATACACACCGGTTTGCCCAAGTGGCTGTTATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS TCA 90 bp GAGGAGATAGTACAACGGGCAGAACTCTCTGAATGTAACAGGCTCTaGTATCGATGCCATGGCCAAGGTTTCCACAGACTATCTTCACGC +
Preference number: 5 (lower is better)
Translates to: EEIVQRAELSECNRL*YRCHGQGFHRLSSR
Trigger: GCGTGAAGATAGTCTGTGGAAACCTTGGCCATGGCATCGATATCAGAGCCTGTTACATTCAGAGAGTTCTGCCCGTTGTACTATCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000558678.1
ENST00000561228.1
CDS TCA 90 bp TTTCGGGGTCAGTATTTTCCTGTGGGACACCGTTCACTTCACCATTaGAGCTGCTTTCCTGGTCTGGAGACTCTGCACTTAACTGATCCA +
Preference number: 5 (lower is better)
Translates to: FRGQYFPVGHRSLHH*SCFPGLETLHLTDP
Trigger: TGGATCAGTTAAGTGCAGAGTCTCCAGACCAGGAAAGCAGCTTCAATGGTGAAGTGAACGGTGTCCCACAGGAAAATACTGACCCCGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS GCA 90 bp CATAGCCGGAGCCCGGGCCGTGACGCATACAAGGTTAGATCACTTTaGTTACAGAGTCCTGGTATAAAACAAGCACCAAATTTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: HSRSPGRDAYKVRSL*LQSPGIKQAPNFPV
Trigger: TACTGGGAAATTTGGTGCTTGTTTTATACCAGGACTCTGTAAGCAAAGTGATCTAACCTTGTATGCGTCACGGCCCGGGCTCCGGCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS-3UTR CAA 90 bp ATGGCTCCCCGCATTTGCTGGGAGGCCTCTAGAGGCTGTGCAGATCCTTTTTCCAAAAGGAATGTTTATTaGTCATCTAGGGAAACCTGG +
Preference number: 5 (lower is better)
Translates to: MAPRICWEASRGCADPFSKRNVY*SSRETW
Trigger: CCAGGTTTCCCTAGATGACAAATAAACATTCCTTTT...GGAAAAAGGATCTGCACAGCCTCTAGAGGCCTCCCAGCAAATGCGGGGAGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS TCA 90 bp TTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACTGAAGAGTaGGTTCCACCAGCTAACTTCTGCTTACCTGGACAGGTGGCTCAA +
Preference number: 5 (lower is better)
Translates to: FSQYQHPHSFCLTEE*VPPANFCLPGQVAQ
Trigger: TTGAGCCACCTGTCCAGGTAAGCAGAAGTTAGCTGGTGGAACTCACTCTTCAGTAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp AGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTACAACAATTTCATTCCATaGGGGCTCCAAGCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: RLCRSFFPVPASSQFLSYNNFIP*GLQARA
Trigger: AGCTCTGGCTTGGAGCCCCAATGGAATGAAATTGTT...GTAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp GAGGCTGTGCAGATCCTTTTTCCCAGTACCAGCATCCTCACAGTTTCTGTCTTAAAAGAGCAGACTTCTTaGCAGAGTAGAGACCAGCAG +
Preference number: 5 (lower is better)
Translates to: EAVQILFPSTSILTVSVLKEQTS*QSRDQQ
Trigger: CTGCTGGTCTCTACTCTGCAAAGAAGTCTGCTCTTT...TAAGACAGAAACTGTGAGGATGCTGGTACTGGGAAAAAGGATCTGCACAGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp TGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATTTGGGGGCCAATGGGTaGGATGTCTTCCCCATCATG +
Preference number: 5 (lower is better)
Translates to: CRLFHERNLLTLTWLFPNLGANG*DVFPIM
Trigger: CATGATGGGGAAGACATCCAACCCATTGGCCCCCAA...ATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAATAGCCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS CCA 90 bp TTCTTCTTCTTCCTTTTCACTTTGATAGGCTTCACGACAAGCTCCTaGTCAAAGTCCTCTGAGCTGATGGCGTTGAATCTCTGTGACAGG +
Preference number: 5 (lower is better)
Translates to: FFFFLFTLIGFTTSS*SKSSELMALNLCDR
Trigger: CCTGTCACAGAGATTCAACGCCATCAGCTCAGAGGACTTTGACCAGGAGCTTGTCGTGAAGCCTATCAAAGTGAAAAGGAAGAAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS-3UTR CAA 90 bp ATCCCGAATTCCAGTTGTGATGTTGATGAACGAGAGTGTGTAGACCCTGGGGGCTGGTTGTGTTCCAATTaGCCTTACAGACTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: IPNSSCDVDERECVDPGGWLCSN*PYRLFF
Trigger: GAAGAAAAGTCTGTAAGGCAAATTGGAACACAACCA...GCCCCCAGGGTCTACACACTCTCGTTCATCAACATCACAACTGGAATTCGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS-3UTR CAA 90 bp GGTGGAGGCTGTGGGTTCTGGAACGAGACAGAAACCAACATAGATGAAAGTAAGTCCCAGTACTTTTCCTaGGTTGTGTTCCAATTTGCC +
Preference number: 5 (lower is better)
Translates to: GGGCGFWNETETNIDESKSQYFS*VVFQFA
Trigger: GGCAAATTGGAACACAACCAAGGAAAAGTACTGGGA...CTTACTTTCATCTATGTTGGTTTCTGTCTCGTTCCAGAACCCACAGCCTCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp TTTCGGCATCTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTGGTTGTGTTCCAATTaGCCTTACAGACTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: FRHLDLIWTWKTSTYVAGWLCSN*PYRLFF
Trigger: GAAGAAAAGTCTGTAAGGCAAATTGGAACACAACCA...GCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp CTTCTCACAGCTCAGGCACCACACTCGGCCAGGTTTGGAAAAAGTCTAGTTTATCACAGTCATGGGCATTaGTGGGTACTAACATTATTC +
Preference number: 5 (lower is better)
Translates to: LLTAQAPHSARFGKSLVYHSHGH*WVLTLF
Trigger: GAATAATGTTAGTACCCACAAATGCCCATGACTGTG...ATAAACTAGACTTTTTCCAAACCTGGCCGAGTGTGGTGCCTGAGCTGTGAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp TTTCGGCATCTTGACCTCATTTGGACATGGAAAACCTCCACCTATGTGGCTGGCTCACAAGTAGAGAACTaGTTTCTTTTCACCCCTCTT +
Preference number: 5 (lower is better)
Translates to: FRHLDLIWTWKTSTYVAGSQVEN*FLFTPL
Trigger: AAGAGGGGTGAAAAGAAACAAGTTCTCTACTTGTGA...GCCAGCCACATAGGTGGAGGTTTTCCATGTCCAAATGAGGTCAAGATGCCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS-3UTR CAA 90 bp TGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATATGGTCGTCATCTCCTaGGGGCTTCTTGGAAATAAT +
Preference number: 5 (lower is better)
Translates to: CRLFHERNLLTLTWLFPNMVVIS*GLLGNN
Trigger: ATTATTTCCAAGAAGCCCCAAGGAGATGACGACCAT...ATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATGAAATAGCCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS TCA 90 bp TTCATTCCATTGGGGCTCCAAGCCAGAGCTGTAATGCTATTTTTGTaGATACCAGTGACATCAAATCTCCGAAGCTGTTTATTTCTCCCT +
Preference number: 5 (lower is better)
Translates to: FIPLGLQARAVMLFL*IPVTSNLRSCLFLP
Trigger: AGGGAGAAATAAACAGCTTCGGAGATTTGATGTCACTGGTATTCACAAAAATAGCATTACAGCTCTGGCTTGGAGCCCCAATGGAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000558678.1
ENST00000561228.1
CDS-3UTR CAA 90 bp AAGCCTTTGCCATCCAGAAATCAGACAGTTTTCCCACTGGTTTTAGATTCTTTAAACAATTTCATTCCATaGGGGCTCCAAGCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: KPLPSRNQTVFPLVLDSLNNFIP*GLQARA
Trigger: AGCTCTGGCTTGGAGCCCCAATGGAATGAAATTGTT...TAAAGAATCTAAAACCAGTGGGAAAACTGTCTGATTTCTGGATGGCAAAGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS GCA 72 bp CCGGAGGAGGCGGGATGGACTCCGGGCCGCGGGGGCTaGCGGGAGCCTGTTCCCTGGGCAACGGGGCCGGCA +
Preference number: 6 (lower is better)
Translates to: PEEAGWTPGRGG*REPVPWATGPA
Trigger: TGCCGGCCCCGTTGCCCAGGGAACAGGCTCCCGGCAGCCCCCGCGGCCCGGAGTCCATCCCGCCTCCTCCGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS CAA 90 bp GCCTGGAGCCCAGGGGGCAGGAGCCCGGAGCCGCTGTCGGTGGAGTaGAGCGAGCTGCTCCTGCTCCTTGGCTCGCTGGCCACGGAGCTG +
Preference number: 6 (lower is better)
Translates to: AWSPGGRSPEPLSVE*SELLLLLGSLATEL
Trigger: CAGCTCCGTGGCCAGCGAGCCAAGGAGCAGGAGCAGCTCGCTCAACTCCACCGACAGCGGCTCCGGGCTCCTGCCCCCTGGGCTCCAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CAA 72 bp CCAGGGGGCAGGAGCCCGGAGCCGCTGTCGGTGGAGTaGAGCGAGCTGCTCCTGCTCCTTGGCTCGCTGGCC +
Preference number: 6 (lower is better)
Translates to: PGGRSPEPLSVE*SELLLLLGSLA
Trigger: GGCCAGCGAGCCAAGGAGCAGGAGCAGCTCGCTCAACTCCACCGACAGCGGCTCCGGGCTCCTGCCCCCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS TCA 72 bp CAGGGGGCAGGAGCCCGGAGCCGCTGTCGGTGGAGTTaGGCGAGCTGCTCCTGCTCCTTGGCTCGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: QGAGARSRCRWS*ASCSCSLARWP
Trigger: TGGCCAGCGAGCCAAGGAGCAGGAGCAGCTCGCTCAACTCCACCGACAGCGGCTCCGGGCTCCTGCCCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 72 bp GGCAGCTGCACCGTGGAGGGCCGCGACTGTGCGCTCTaGGCGCTGACGCTGCACAGGTCCTTGCTGCTCTGG +
Preference number: 6 (lower is better)
Translates to: GSCTVEGRDCAL*ALTLHRSLLLW
Trigger: CCAGAGCAGCAAGGACCTGTGCAGCGTCAGCGCCCAGAGCGCACAGTCGCGGCCCTCCACGGTGCAGCTGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 72 bp GTCTGTGACGCCGTACCGCCGGGCGAGGTCTCCGTTTaGACAGCGGGCCCACACGGTCCTGGTGCTCAGCGC +
Preference number: 6 (lower is better)
Translates to: VCDAVPPGEVSV*TAGPHGPGAQR
Trigger: GCGCTGAGCACCAGGACCGTGTGGGCCCGCTGTCCAAACGGAGACCTCGCCCGGCGGTACGGCGTCACAGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000559124.1
ENST00000561099.1
CDS GCA 72 bp TTCGGGAGGCAGCTGCACCGTGGAGGGCCGCGACTGTaGGCTCTGGGCGCTGACGCTGCACAGGTCCTTGCT +
Preference number: 6 (lower is better)
Translates to: FGRQLHRGGPRL*ALGADAAQVLA
Trigger: AGCAAGGACCTGTGCAGCGTCAGCGCCCAGAGCGCACAGTCGCGGCCCTCCACGGTGCAGCTGCCTCCCGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS GCA 72 bp GGTCTCCGTTTGGACAGCGGGCCCACACGGTCCTGGTaGTCAGCGCCAGCTGGCAGGCCTGCAACCCTGGCA +
Preference number: 6 (lower is better)
Translates to: GLRLDSGPTRSW*SAPAGRPATLA
Trigger: TGCCAGGGTTGCAGGCCTGCCAGCTGGCGCTGAGCACCAGGACCGTGTGGGCCCGCTGTCCAAACGGAGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000561099.1
CDS GCA 72 bp GGTCTCCGTTTGGACAGCGGGCCCACACGGTCCTGGTaGTCAGCGCCAGCTGGCAGGCCTGCAACCCTGTGG +
Preference number: 6 (lower is better)
Translates to: GLRLDSGPTRSW*SAPAGRPATLW
Trigger: CCACAGGGTTGCAGGCCTGCCAGCTGGCGCTGAGCACCAGGACCGTGTGGGCCCGCTGTCCAAACGGAGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559124.1
CDS CCA 72 bp CGAGGTCTCCGTTTGGACAGCGGGCCCACACGGTCCTaGTGCTCAGCGCCAGCTGGCAGGCCTGCAACCCTG +
Preference number: 6 (lower is better)
Translates to: RGLRLDSGPTRS*CSAPAGRPATL
Trigger: CAGGGTTGCAGGCCTGCCAGCTGGCGCTGAGCACCAGGACCGTGTGGGCCCGCTGTCCAAACGGAGACCTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000559124.1
ENST00000561099.1
CDS GCA 72 bp ACTTCTGCCAGCGCAGCCCGGCGCCCGGCAACGCGCTaGAGAACAGGCCGCCTTTGTAGTCCAGGCACCAGA +
Preference number: 6 (lower is better)
Translates to: TSASAARRPATR*RTGRLCSPGTR
Trigger: TCTGGTGCCTGGACTACAAAGGCGGCCTGTTCTGCAGCGCGTTGCCGGGCGCCGGGCTGCGCTGGCAGAAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000558678.1
ENST00000560060.5
CDS CAA 72 bp GGTGCCGTGCGAGTGGCTGAACGTCTTTGTCAGCCGTaGGAGGAGGTAGCCGGGCGGGCCCACAGCCCACAG +
Preference number: 6 (lower is better)
Translates to: GAVRVAERLCQP*EEVAGRAHSPQ
Trigger: CTGTGGGCTGTGGGCCCGCCCGGCTACCTCCTCCAACGGCTGACAAAGACGTTCAGCCACTCGCACGGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000559124.1
ENST00000561099.1
CDS TCA 72 bp CATGCTCCCAGGCGGTCCCCACAGGCATCTCCTCGGTaGTCCCGGTCCGCACGTGCACGTTCCACCTGCTGT +
Preference number: 6 (lower is better)
Translates to: HAPRRSPQASPR*SRSARARSTCC
Trigger: ACAGCAGGTGGAACGTGCACGTGCGGACCGGGATCACCGAGGAGATGCCTGTGGGGACCGCCTGGGAGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000561099.1
CDS GCA 72 bp AGCCCGGCGTCCTCTGCACCCAGCCGGCTCAGGTCCTaGTGGGAGCAACTAGGTCCGAGCTCTGTCACACTC +
Preference number: 6 (lower is better)
Translates to: SPASSAPSRLRS*WEQLGPSSVTL
Trigger: GAGTGTGACAGAGCTCGGACCTAGTTGCTCCCAGCAGGACCTGAGCCGGCTGGGTGCAGAGGACGCCGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000558678.1
ENST00000560060.5
CDS CCA 72 bp GTGGGGCAGCTCTTGGAGAGCGTCCTGATGAACACCTaGCCGAGGCTGTCCAGCGCCCACAGCGCATCCTGG +
Preference number: 6 (lower is better)
Translates to: VGQLLESVLMNT*PRLSSAHSASW
Trigger: CCAGGATGCGCTGTGGGCGCTGGACAGCCTCGGCCAGGTGTTCATCAGGACGCTCTCCAAGAGCTGCCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CAA 90 bp GAGGGCCGCGACTGTGCGCTCTGGGCGCTGACGCTGCACAGGTCCTaGCTGCTCTGGCACAGCCACAGGAAGCTTCCTTCCTTCGTGGGA +
Preference number: 6 (lower is better)
Translates to: EGRDCALWALTLHRS*LLWHSHRKLPSFVG
Trigger: TCCCACGAAGGAAGGAAGCTTCCTGTGGCTGTGCCAGAGCAGCAAGGACCTGTGCAGCGTCAGCGCCCAGAGCGCACAGTCGCGGCCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS TCA 72 bp CGGCCTGGCTGCTCTTCTGGGTGCCGTGCGAGTGGCTaGACGTCTTTGTCAGCCGTTGGAGGAGGTAGCCGG +
Preference number: 6 (lower is better)
Translates to: RPGCSSGCRASG*TSLSAVGGGSR
Trigger: CCGGCTACCTCCTCCAACGGCTGACAAAGACGTTCAGCCACTCGCACGGCACCCAGAAGAGCAGCCAGGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000559124.1
ENST00000561099.1
CDS GCA 72 bp GATCCAGGCCGTGTCATCGCTCAGGGCCACAAACACTaGCTGGGGCAGGGCTTCGTACCAGTGCCGCTTCCC +
Preference number: 6 (lower is better)
Translates to: DPGRVIAQGHKH*LGQGFVPVPLP
Trigger: GGGAAGCGGCACTGGTACGAAGCCCTGCCCCAGGCAGTGTTTGTGGCCCTGAGCGATGACACGGCCTGGATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359520.12
ENST00000557786.1
ENST00000558678.1
ENST00000560060.5
CDS GCA 72 bp AAGCTGCTCACGCCCTCCCGGTACAGGAGGGCCCTCTaGTCTGTCAGCGCCCACACCACATTGTTCCGGGCT +
Preference number: 6 (lower is better)
Translates to: KLLTPSRYRRAL*SVSAHTTLFRA
Trigger: AGCCCGGAACAATGTGGTGTGGGCGCTGACAGAGCAGAGGGCCCTCCTGTACCGGGAGGGCGTGAGCAGCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000557786.1
ENST00000558678.1
CDS GCA 72 bp TGGGGCATGGCGGCCTGGCTGCTCTTCTGGGTGCCGTaGGAGTGGCTGAACGTCTTTGTCAGCCGTTGGAGG +
Preference number: 6 (lower is better)
Translates to: WGMAAWLLFWVP*EWLNVFVSRWR
Trigger: CCTCCAACGGCTGACAAAGACGTTCAGCCACTCGCACGGCACCCAGAAGAGCAGCCAGGCCGCCATGCCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000559124.1
ENST00000561099.1
CDS CCA 72 bp CAGGCCGTGTCATCGCTCAGGGCCACAAACACTGCCTaGGGCAGGGCTTCGTACCAGTGCCGCTTCCCCTTG +
Preference number: 6 (lower is better)
Translates to: QAVSSLRATNTA*GRASYQCRFPL
Trigger: CAAGGGGAAGCGGCACTGGTACGAAGCCCTGCCCCAGGCAGTGTTTGTGGCCCTGAGCGATGACACGGCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359520.12
ENST00000557786.1
ENST00000558678.1
ENST00000560060.5
CDS CAA 90 bp ACGTGCACGTTCCACCTGCTGTCAAGCACCCACAGCATCTGGTCGTaGGGGCTGGAATGGACGCTGACCAAGCTGACCCCGGCGGGCTGG +
Preference number: 6 (lower is better)
Translates to: TCTFHLLSSTHSIWS*GLEWTLTKLTPAGW
Trigger: CCAGCCCGCCGGGGTCAGCTTGGTCAGCGTCCATTCCAGCCCCAACGACCAGATGCTGTGGGTGCTTGACAGCAGGTGGAACGTGCACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000561099.1
CDS GCA 72 bp GGTGCCGGCAGTACAGATAGAGCATGCCGATGCTGCTaGCCACCGCGATGTAGTCCCCGTTGGTGTCGAGGG +
Preference number: 6 (lower is better)
Translates to: GAGSTDRACRCC*PPRCSPRWCRG
Trigger: CCCTCGACACCAACGGGGACTACATCGCGGTGGGCAGCAGCATCGGCATGCTCTATCTGTACTGCCGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000558678.1
ENST00000561228.1
CDS GCA 72 bp TGCAAACTGATCTGGCTTGAGCAGCCCGGCGTCCTCTaGACCCAGCCGGCTCAGGTCCTGCTGGGAGCAACT +
Preference number: 6 (lower is better)
Translates to: CKLIWLEQPGVL*TQPAQVLLGAT
Trigger: AGTTGCTCCCAGCAGGACCTGAGCCGGCTGGGTGCAGAGGACGCCGGGCTGCTCAAGCCAGATCAGTTTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000558678.1
ENST00000560060.5
CDS GCA 72 bp TGTCACACTTCCACTGCTCGCCTTCCGGACAGAAGCTaGTCACGCCCTCCCGGTACAGGAGGGCCCTCTGCT +
Preference number: 6 (lower is better)
Translates to: CHTSTARLPDRS*SRPPGTGGPSA
Trigger: AGCAGAGGGCCCTCCTGTACCGGGAGGGCGTGAGCAGCTTCTGTCCGGAAGGCGAGCAGTGGAAGTGTGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000557786.1
ENST00000558678.1
CDS GCA 72 bp CCCACAGGCATCTCCTCGGTGATCCCGGTCCGCACGTaGACGTTCCACCTGCTGTCAAGCACCCACAGCATC +
Preference number: 6 (lower is better)
Translates to: PTGISSVIPVRT*TFHLLSSTHSI
Trigger: GATGCTGTGGGTGCTTGACAGCAGGTGGAACGTGCACGTGCGGACCGGGATCACCGAGGAGATGCCTGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000561099.1
CDS CCA 72 bp TCAAGCACCCACAGCATCTGGTCGTTGGGGCTGGAATaGACGCTGACCAAGCTGACCCCGGCGGGCTGGACA +
Preference number: 6 (lower is better)
Translates to: SSTHSIWSLGLE*TLTKLTPAGWT
Trigger: TGTCCAGCCCGCCGGGGTCAGCTTGGTCAGCGTCCATTCCAGCCCCAACGACCAGATGCTGTGGGTGCTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS CCA 72 bp CTGGAATGGACGCTGACCAAGCTGACCCCGGCGGGCTaGAAGCGGGAAGGGACTTTCAGGGAAGGCAGGAGT +
Preference number: 6 (lower is better)
Translates to: LEWTLTKLTPAG*KREGTFREGRS
Trigger: ACTCCTGCCTTCCCTGAAAGTCCCTTCCCGCTTCCAGCCCGCCGGGGTCAGCTTGGTCAGCGTCCATTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561099.1
CDS CCA 72 bp TCAAGCACCCACAGCATCTGGTCGTTGGGGCTGGAATaGACGCTGACCAAGCTGACCCCGGCGGGCTGGAAG +
Preference number: 6 (lower is better)
Translates to: SSTHSIWSLGLE*TLTKLTPAGWK
Trigger: CTTCCAGCCCGCCGGGGTCAGCTTGGTCAGCGTCCATTCCAGCCCCAACGACCAGATGCTGTGGGTGCTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561099.1
CDS CCA 72 bp AGAGCCTCTGAGCCTCGTCTCAGAAACTGTGGCCCCTaGCAGCTTCTCCGCTTGCTGCACGTGGACACGCTC +
Preference number: 6 (lower is better)
Translates to: RASEPRLRNCGP*QLLRLLHVDTL
Trigger: GAGCGTGTCCACGTGCAGCAAGCGGAGAAGCTGCCAGGGGCCACAGTTTCTGAGACGAGGCTCAGAGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 72 bp AGGCCTCCATGCTGGTTAGGATGTCCTGCTCTTGGCTaGGCTCCACGGGGCTGCCTTCATCAGCTCTGGTCC +
Preference number: 6 (lower is better)
Translates to: RPPCWLGCPALG*APRGCLHQLWS
Trigger: GGACCAGAGCTGATGAAGGCAGCCCCGTGGAGCCCAGCCAAGAGCAGGACATCCTAACCAGCATGGAGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 72 bp CCAGAGGCCTCCATGCTGGTTAGGATGTCCTGCTCTTaGCTGGGCTCCACGGGGCTGCCTTCATCAGCTCTG +
Preference number: 6 (lower is better)
Translates to: PEASMLVRMSCS*LGSTGLPSSAL
Trigger: CAGAGCTGATGAAGGCAGCCCCGTGGAGCCCAGCCAAGAGCAGGACATCCTAACCAGCATGGAGGCCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 72 bp GGGACAGCGGGTAGGGACAGTCCACCTTTACGGCTCTaGCACAAGGGCGATCCACGCTCAGACCTGTCTGCA +
Preference number: 6 (lower is better)
Translates to: GTAGRDSPPLRL*HKGDPRSDLSA
Trigger: TGCAGACAGGTCTGAGCGTGGATCGCCCTTGTGCCAGAGCCGTAAAGGTGGACTGTCCCTACCCGCTGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000557786.1
ENST00000558678.1
CDS CCA 72 bp CTCTGGGCGCTGACGCTGCACAGGTCCTTGCTGCTCTaGCACAGCCACAGGAAGCTTCCTTCCTTCGTGGGA +
Preference number: 6 (lower is better)
Translates to: LWALTLHRSLLL*HSHRKLPSFVG
Trigger: TCCCACGAAGGAAGGAAGCTTCCTGTGGCTGTGCCAGAGCAGCAAGGACCTGTGCAGCGTCAGCGCCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 72 bp ACTGTGGCCCCTGGCAGCTTCTCCGCTTGCTGCACGTaGACACGCTCTGAGCATCCAGACATCTCCAGACCA +
Preference number: 6 (lower is better)
Translates to: TVAPGSFSACCT*TRSEHPDISRP
Trigger: TGGTCTGGAGATGTCTGGATGCTCAGAGCGTGTCCACGTGCAGCAAGCGGAGAAGCTGCCAGGGGCCACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CAA 72 bp TTCCACCTGCTGTCAAGCACCCACAGCATCTGGTCGTaGGGGCTGGAATGGACGCTGACCAAGCTGACCCCG +
Preference number: 6 (lower is better)
Translates to: FHLLSSTHSIWS*GLEWTLTKLTP
Trigger: CGGGGTCAGCTTGGTCAGCGTCCATTCCAGCCCCAACGACCAGATGCTGTGGGTGCTTGACAGCAGGTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000561099.1
CDS TCA 72 bp CCAGGCACCAGATATACTTCTCGGAGACCACCAAGCTaGGGATGCCATAGCCGGGACCCGAGTAGCCCATCC +
Preference number: 6 (lower is better)
Translates to: PGTRYTSRRPPS*GCHSRDPSSPS
Trigger: GGATGGGCTACTCGGGTCCCGGCTATGGCATCCTCAGCTTGGTGGTCTCCGAGAAGTATATCTGGTGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000558678.1
ENST00000560060.5
CDS TCA 72 bp GCTCTGTCAGCGCCCACACCACATTGTTCCGGGCTGTaGTCTGGGACAGCGGGTAGGGACAGTCCACCTTTA +
Preference number: 6 (lower is better)
Translates to: ALSAPTPHCSGL*SGTAGRDSPPL
Trigger: TAAAGGTGGACTGTCCCTACCCGCTGTCCCAGATCACAGCCCGGAACAATGTGGTGTGGGCGCTGACAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000557786.1
ENST00000558678.1
CDS GCA 72 bp TTCCAGAGAAGGGCTCCTGAGGGCGAGACTGCCACCTaGTGGACAGCATCTTCAAACTTCTGCCAGCGCAGC +
Preference number: 6 (lower is better)
Translates to: FQRRAPEGETAT*WTASSNFCQRS
Trigger: GCTGCGCTGGCAGAAGTTTGAAGATGCTGTCCAGCAGGTGGCAGTCTCGCCCTCAGGAGCCCTTCTCTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000558678.1
ENST00000560060.5
CDS GCA 72 bp GCCACAAACACTGCCTGGGGCAGGGCTTCGTACCAGTaGCGCTTCCCCTTGATGGTGACTTTCCCACAAGCA +
Preference number: 6 (lower is better)
Translates to: ATNTAWGRASYQ*RFPLMVTFPQA
Trigger: TGCTTGTGGGAAAGTCACCATCAAGGGGAAGCGGCACTGGTACGAAGCCCTGCCCCAGGCAGTGTTTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359520.12
ENST00000557786.1
ENST00000558678.1
ENST00000560060.5
CDS CCA 72 bp TGCACGTTCCACCTGCTGTCAAGCACCCACAGCATCTaGTCGTTGGGGCTGGAATGGACGCTGACCAAGCTG +
Preference number: 6 (lower is better)
Translates to: CTFHLLSSTHSI*SLGLEWTLTKL
Trigger: CAGCTTGGTCAGCGTCCATTCCAGCCCCAACGACCAGATGCTGTGGGTGCTTGACAGCAGGTGGAACGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000561099.1
CDS CAA 72 bp CATGCGCAGCTTATCTGCCACCTTTTCTACGGGGGCTaGGGCTGCTGTGGCCACCGAGTGAGTGGCATGGAT +
Preference number: 6 (lower is better)
Translates to: HAQLICHLFYGG*GCCGHRVSGMD
Trigger: ATCCATGCCACTCACTCGGTGGCCACAGCAGCCCAAGCCCCCGTAGAAAAGGTGGCAGATAAGCTGCGCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS TCA 72 bp CCGCTGTTATTGACCCCGAGAAGGCTTGGCTGGCACTaGAGCTGCTGGGACCAAAACGCCATGCGCAGCTTA +
Preference number: 6 (lower is better)
Translates to: PLLLTPRRLGWH*SCWDQNAMRSL
Trigger: TAAGCTGCGCATGGCGTTTTGGTCCCAGCAGCTTCAGTGCCAGCCAAGCCTTCTCGGGGTCAATAACAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 72 bp GGCGGGCTGGACAGGTGGCTCAATCATTATCCAGGCTaGAAGCATGAGACTGGGATTGAGAGGCTGAGTCCC +
Preference number: 6 (lower is better)
Translates to: GGLDRWLNHYPG*KHETGIERLSP
Trigger: GGGACTCAGCCTCTCAATCCCAGTCTCATGCTTCCAGCCTGGATAATGATTGAGCCACCTGTCCAGCCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359520.12
CDS CAA 72 bp CCCAGGTGCCTCTCAGGTAAGCTGCAACTTCCACTGTaGGGGGATTCCAGACGCGGGTGCAGTTCAAAAGGC +
Preference number: 6 (lower is better)
Translates to: PRCLSGKLQLPL*GDSRRGCSSKG
Trigger: GCCTTTTGAACTGCACCCGCGTCTGGAATCCCCCAACAGTGGAAGTTGCAGCTTACCTGAGAGGCACCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000558678.1
ENST00000561228.1
CDS CAA 72 bp ACAAGCTCCTGGTCAAAGTCCTCTGAGCTGATGGCGTaGAATCTCTGTGACAGGGGCTGGCTGCCCTTGCCC +
Preference number: 6 (lower is better)
Translates to: TSSWSKSSELMA*NLCDRGWLPLP
Trigger: GGGCAAGGGCAGCCAGCCCCTGTCACAGAGATTCAACGCCATCAGCTCAGAGGACTTTGACCAGGAGCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS TCA 72 bp TGGCAGCTTCTCCGCTTGCTGCACGTGGACACGCTCTaGGCATCCAGACATCTCCAGACCATCTCTCACTGT +
Preference number: 6 (lower is better)
Translates to: WQLLRLLHVDTL*ASRHLQTISHC
Trigger: ACAGTGAGAGATGGTCTGGAGATGTCTGGATGCTCAGAGCGTGTCCACGTGCAGCAAGCGGAGAAGCTGCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS TCA 72 bp AGGTTCCCATGGATGTCCAGGGCCCAGAGAGTCTGCTaGTCCCCGAGCGTTATGCAGACGGGTTCTAAAGCT +
Preference number: 6 (lower is better)
Translates to: RFPWMSRAQRVC*SPSVMQTGSKA
Trigger: AGCTTTAGAACCCGTCTGCATAACGCTCGGGGATCAGCAGACTCTCTGGGCCCTGGACATCCATGGGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS TCA 72 bp CATTCTTGCCCGAGGAGATCCAGACACCGCTGTTATTaGCCCCGAGAAGGCTTGGCTGGCACTGAAGCTGCT +
Preference number: 6 (lower is better)
Translates to: HSCPRRSRHRCY*PREGLAGTEAA
Trigger: AGCAGCTTCAGTGCCAGCCAAGCCTTCTCGGGGTCAATAACAGCGGTGTCTGGATCTCCTCGGGCAAGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS GCA 72 bp AAAGCTTGCCTTTCGCTGACAATGTCACACTTCCACTaGTCGCCTTCCGGACAGAAGCTGCTCACGCCCTCC +
Preference number: 6 (lower is better)
Translates to: KACLSLTMSHFH*SPSGQKLLTPS
Trigger: GGAGGGCGTGAGCAGCTTCTGTCCGGAAGGCGAGCAGTGGAAGTGTGACATTGTCAGCGAAAGGCAAGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000557786.1
ENST00000558678.1
CDS GCA 72 bp CAGCTTATCTGCCACCTTTTCTACGGGGGCTTGGGCTaGTGTGGCCACCGAGTGAGTGGCATGGATTATCGT +
Preference number: 6 (lower is better)
Translates to: QLICHLFYGGLG*CGHRVSGMDYR
Trigger: ACGATAATCCATGCCACTCACTCGGTGGCCACAGCAGCCCAAGCCCCCGTAGAAAAGGTGGCAGATAAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 72 bp CCAGGTGCCTCTCAGGTAAGCTGCAACTTCCACTGTTaGGGGATTCCAGACGCGGGTGCAGTTCAAAAGGCT +
Preference number: 6 (lower is better)
Translates to: PGASQVSCNFHC*GIPDAGAVQKA
Trigger: AGCCTTTTGAACTGCACCCGCGTCTGGAATCCCCCAACAGTGGAAGTTGCAGCTTACCTGAGAGGCACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000558678.1
ENST00000561228.1
CDS CCA 72 bp AAGGAAGCCCGTGGGCATAGATGTCCTCCTCATCGCTaGACGTCAATGTCTGATCCCGTGGAGGCTGCTCAA +
Preference number: 6 (lower is better)
Translates to: KEARGHRCPPHR*TSMSDPVEAAQ
Trigger: TTGAGCAGCCTCCACGGGATCAGACATTGACGTCCAGCGATGAGGAGGACATCTATGCCCACGGGCTTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 72 bp CTACGGGGGCTTGGGCTGCTGTGGCCACCGAGTGAGTaGCATGGATTATCGTCTGAAATAAGCTGCACTGGT +
Preference number: 6 (lower is better)
Translates to: LRGLGLLWPPSE*HGLSSEISCTG
Trigger: ACCAGTGCAGCTTATTTCAGACGATAATCCATGCCACTCACTCGGTGGCCACAGCAGCCCAAGCCCCCGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 72 bp TCATCAGTGACAGCATGCCAGAGATTTGTGCTGAGGTaGCCAGAGGCCTCCATGCTGGTTAGGATGTCCTGC +
Preference number: 6 (lower is better)
Translates to: SSVTACQRFVLR*PEASMLVRMSC
Trigger: GCAGGACATCCTAACCAGCATGGAGGCCTCTGGCCACCTCAGCACAAATCTCTGGCATGCTGTCACTGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000558678.1
ENST00000560060.5
CDS CCA 72 bp TATCTGCCACCTTTTCTACGGGGGCTTGGGCTGCTGTaGCCACCGAGTGAGTGGCATGGATTATCGTCTGAA +
Preference number: 6 (lower is better)
Translates to: YLPPFLRGLGLL*PPSEWHGLSSE
Trigger: TTCAGACGATAATCCATGCCACTCACTCGGTGGCCACAGCAGCCCAAGCCCCCGTAGAAAAGGTGGCAGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS GCA 72 bp AAGTTGAAAAACTGCAACCCTGCCAGAGGCTGTGCCTaGTGCCACCAGGTCATCAAAGCAGCTCAGCAGCTT +
Preference number: 6 (lower is better)
Translates to: KLKNCNPARGCA*CHQVIKAAQQL
Trigger: AAGCTGCTGAGCTGCTTTGATGACCTGGTGGCAGCAGGCACAGCCTCTGGCAGGGTTGCAGTTTTTCAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000558678.1
ENST00000561228.1
CDS CCA 72 bp AGCTGCACAATGGAAGATGGCTCCTCCAACACCAGCTaGGAGTTACAGAGCCCCTGGTCTAGATCCAGAGAA +
Preference number: 6 (lower is better)
Translates to: SCTMEDGSSNTS*ELQSPWSRSRE
Trigger: TTCTCTGGATCTAGACCAGGGGCTCTGTAACTCCCAGCTGGTGTTGGAGGAGCCATCTTCCATTGTGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000558678.1
ENST00000561228.1
CDS CCA 72 bp GCTTACCTGGACAGGTGGCTCAATCATTATCCAGGCTaGAAGCATGAGACTGGGATTGAGAGGCTGAGTCCC +
Preference number: 6 (lower is better)
Translates to: AYLDRWLNHYPG*KHETGIERLSP
Trigger: GGGACTCAGCCTCTCAATCCCAGTCTCATGCTTCCAGCCTGGATAATGATTGAGCCACCTGTCCAGGTAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS CAA 90 bp CTGGAGACTCTGCACTTAACTGATCCACGCTACTGCCCAGGACACTaGAGGTCATCGACAGCAAGTCTGTGTTCAAGGACTGGGGACTGT +
Preference number: 6 (lower is better)
Translates to: LETLHLTDPRYCPGH*RSSTASLCSRTGDC
Trigger: ACAGTCCCCAGTCCTTGAACACAGACTTGCTGTCGATGACCTCAAGTGTCCTGGGCAGTAGCGTGGATCAGTTAAGTGCAGAGTCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS TCA 72 bp AAGCTGCTTTCCTGGTCTGGAGACTCTGCACTTAACTaGTCCACGCTACTGCCCAGGACACTTGAGGTCATC +
Preference number: 6 (lower is better)
Translates to: KLLSWSGDSALN*STLLPRTLEVI
Trigger: GATGACCTCAAGTGTCCTGGGCAGTAGCGTGGATCAGTTAAGTGCAGAGTCTCCAGACCAGGAAAGCAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS GCA 72 bp AGGGTGTCGATTCCAGGGAGCTGTGACAGGTGCTCCTaGTTCCACCTTCTGTCTTCTTCTTCTTCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: RVSIPGSCDRCS*FHLLSSSSSSS
Trigger: GGAAGAAGAAGAAGAAGAAGACAGAAGGTGGAAGCAGGAGCACCTGTCACAGCTCCCTGGAATCGACACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 72 bp CCAGCAGCACTTTCTGGCTATAATCCAGCTGCACAATaGAAGATGGCTCCTCCAACACCAGCTGGGAGTTAC +
Preference number: 6 (lower is better)
Translates to: PAALSGYNPAAQ*KMAPPTPAGSY
Trigger: GTAACTCCCAGCTGGTGTTGGAGGAGCCATCTTCCATTGTGCAGCTGGATTATAGCCAGAAAGTGCTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000558678.1
ENST00000561228.1
CDS CAA 90 bp CACATAGTCCGTGATGCTCACTTGCCACCAATGGTCGTCATCTCCTaGGGGCTTCTTGGAAATAATGCCAGTTCTGAACCACAGGTTCCC +
Preference number: 6 (lower is better)
Translates to: HIVRDAHLPPMVVIS*GLLGNNASSEPQVP
Trigger: GGGAACCTGTGGTTCAGAACTGGCATTATTTCCAAGAAGCCCCAAGGAGATGACGACCATTGGTGGCAAGTGAGCATCACGGACTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS GCA 72 bp CAGGAGAGCTGTCCTGTTCTTGGAAGGGTAACTGTGTaGTATTTGGTCCATCATCTGCAGGACACGGCTCAT +
Preference number: 6 (lower is better)
Translates to: QESCPVLGRVTV*YLVHHLQDTAH
Trigger: ATGAGCCGTGTCCTGCAGATGATGGACCAAATAGCACACAGTTACCCTTCCAAGAACAGGACAGCTCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CAA 72 bp CACAGACTATCTTCACGCAGGAAAAGGAATGTTTATTaGTCATCTAGGGAAACCTGGGGGCTCCCGCGGCAG +
Preference number: 6 (lower is better)
Translates to: HRLSSRRKRNVY*SSRETWGLPRQ
Trigger: CTGCCGCGGGAGCCCCCAGGTTTCCCTAGATGACAAATAAACATTCCTTTTCCTGCGTGAAGATAGTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000558678.1
ENST00000561228.1
CDS CAA 72 bp CCTATGAGACTTCCCTTAGCGACGTGGAATTCATTCTaGCCCGAGGAGATCCAGACACCGCTGTTATTGACC +
Preference number: 6 (lower is better)
Translates to: PMRLPLATWNSF*PEEIQTPLLLT
Trigger: GGTCAATAACAGCGGTGTCTGGATCTCCTCGGGCAAGAATGAATTCCACGTCGCTAAGGGAAGTCTCATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CAA 72 bp CACAGGCCCAGATGTGCTGATTTCCACATGCCAAGCTaGTCAATTTTACAGCTCCTAGCTGGGAGAGGTCCA +
Preference number: 6 (lower is better)
Translates to: HRPRCADFHMPS*SILQLLAGRGP
Trigger: TGGACCTCTCCCAGCTAGGAGCTGTAAAATTGACAAGCTTGGCATGTGGAAATCAGCACATCTGGGCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 72 bp GTGATGCTCACTTGCCACCAATGGTCGTCATCTCCTTaGGGCTTCTTGGAAATAATGCCAGTTCTGAACCAC +
Preference number: 6 (lower is better)
Translates to: VMLTCHQWSSSP*GFLEIMPVLNH
Trigger: GTGGTTCAGAACTGGCATTATTTCCAAGAAGCCCCAAGGAGATGACGACCATTGGTGGCAAGTGAGCATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 72 bp GAGTTCCACCAGCTAACTTCTGCTTACCTGGACAGGTaGCTCAATCATTATCCAGGCTGGAAGCATGAGACT +
Preference number: 6 (lower is better)
Translates to: EFHQLTSAYLDR*LNHYPGWKHET
Trigger: AGTCTCATGCTTCCAGCCTGGATAATGATTGAGCCACCTGTCCAGGTAAGCAGAAGTTAGCTGGTGGAACTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS CAA 72 bp CGTGATGCTCACTTGCCACCAATGGTCGTCATCTCCTaGGGGCTTCTTGGAAATAATGCCAGTTCTGAACCA +
Preference number: 6 (lower is better)
Translates to: RDAHLPPMVVIS*GLLGNNASSEP
Trigger: TGGTTCAGAACTGGCATTATTTCCAAGAAGCCCCAAGGAGATGACGACCATTGGTGGCAAGTGAGCATCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS TCA 72 bp GTACAACGGGCAGAACTCTCTGAATGTAACAGGCTCTaGTATCGATGCCATGGCCAAGGTTTCCACAGACTA +
Preference number: 6 (lower is better)
Translates to: VQRAELSECNRL*YRCHGQGFHRL
Trigger: TAGTCTGTGGAAACCTTGGCCATGGCATCGATATCAGAGCCTGTTACATTCAGAGAGTTCTGCCCGTTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000558678.1
ENST00000561228.1
CDS TCA 72 bp CAGTATTTTCCTGTGGGACACCGTTCACTTCACCATTaGAGCTGCTTTCCTGGTCTGGAGACTCTGCACTTA +
Preference number: 6 (lower is better)
Translates to: QYFPVGHRSLHH*SCFPGLETLHL
Trigger: TAAGTGCAGAGTCTCCAGACCAGGAAAGCAGCTTCAATGGTGAAGTGAACGGTGTCCCACAGGAAAATACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS GCA 72 bp AGCCCGGGCCGTGACGCATACAAGGTTAGATCACTTTaGTTACAGAGTCCTTTTCCTTGGTTGTGTTCCAAT +
Preference number: 6 (lower is better)
Translates to: SPGRDAYKVRSL*LQSPFPWLCSN
Trigger: ATTGGAACACAACCAAGGAAAAGGACTCTGTAAGCAAAGTGATCTAACCTTGTATGCGTCACGGCCCGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561228.1
CDS TCA 72 bp AGCTGTTTATTTCTCCCTGGCAATGAAGATACAAGTTaGAAAACTGCAACCCTGCCAGAGGCTGTGCCTGCT +
Preference number: 6 (lower is better)
Translates to: SCLFLPGNEDTS*KTATLPEAVPA
Trigger: AGCAGGCACAGCCTCTGGCAGGGTTGCAGTTTTTCAACTTGTATCTTCATTGCCAGGGAGAAATAAACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359520.12
ENST00000558678.1
ENST00000561228.1
CDS TCA 72 bp TACCAGCATCCTCACAGTTTCTGTCTTACTGAAGAGTaGGTTCCACCAGCTAACTTCTGCTTACCTGGACAG +
Preference number: 6 (lower is better)
Translates to: YQHPHSFCLTEE*VPPANFCLPGQ
Trigger: CTGTCCAGGTAAGCAGAAGTTAGCTGGTGGAACTCACTCTTCAGTAAGACAGAAACTGTGAGGATGCTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558678.1
CDS CCA 72 bp TTCCTTTTCACTTTGATAGGCTTCACGACAAGCTCCTaGTCAAAGTCCTCTGAGCTGATGGCGTTGAATCTC +
Preference number: 6 (lower is better)
Translates to: FLFTLIGFTTSS*SKSSELMALNL
Trigger: GAGATTCAACGCCATCAGCTCAGAGGACTTTGACCAGGAGCTTGTCGTGAAGCCTATCAAAGTGAAAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1
CDS CCA 72 bp CAGGACATTAAACGTTTCGGGGTCAGTATTTTCCTGTaGGACACCGTTCACTTCACCATTGAAGCTGCTTTC +
Preference number: 6 (lower is better)
Translates to: QDIKRFGVSIFL*DTVHFTIEAAF
Trigger: GAAAGCAGCTTCAATGGTGAAGTGAACGGTGTCCCACAGGAAAATACTGACCCCGAAACGTTTAATGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359520.12
ENST00000558678.1