RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TEAD4 (Homo sapiens)

Ensembl gene IDs: ENSG00000197905

Ensembl transcript IDs: ENST00000358409.7, ENST00000359864.8, ENST00000397122.6, ENST00000443986.3, ENST00000536826.2, ENST00000540314.2, ENST00000543035.6, ENST00000544666.1

Found 216 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGGCACTTCAGGGGGCTaGCCCTGCAGGTCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTGTSGG*PCRSPP
Trigger: GGGAGGGGACCTGCAGGGGCAGCCCCCTGAAGTGCC...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
3UTR-3UTR GCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTGGCACTTCAGGGGGCTaGCCCTGCAGGTCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAGTSGG*PCRSPP
Trigger: GGGAGGGGACCTGCAGGGGCAGCCCCCTGAAGTGCC...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
3UTR-3UTR GCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCGGCACTTCAGGGGGCTaGCCCTGCAGGTCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLGTSGG*PCRSPP
Trigger: GGGAGGGGACCTGCAGGGGCAGCCCCCTGAAGTGCC...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
3UTR-3UTR GCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCCACGTCCCCGTTTCCTaGACACACGTCTCTTCCCCC +
Preference number: 2 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLHVPVS*THVSSP
Trigger: GGGGGAAGAGACGTGTGTGCAGGAAACGGGGACGTG...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
3UTR-3UTR GCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCACGTCCCCGTTTCCTaGACACACGTCTCTTCCCCC +
Preference number: 2 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAHVPVS*THVSSP
Trigger: GGGGGAAGAGACGTGTGTGCAGGAAACGGGGACGTG...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
3UTR CCA 72 bp GCCCTGCCATGGGGGTGCCGGGGGCGCAGAGGGCGATaGGGCGGGCCCTGCAGGAGACTCAAACCCTGGCAG +
Preference number: 3 (lower is better)
Translates to: ALPWGCRGRRGR*GGPCRRLKPWQ
Trigger: CTGCCAGGGTTTGAGTCTCCTGCAGGGCCCGCCCCATCGCCCTCTGCGCCCCCGGCACCCCCATGGCAGGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR TCA 90 bp GAGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGAGGGCTTGTCCAGTGCCTaGCTGCCCCCAGAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: ETQTLAEAAEAGQHRFAEGLSSA*LPPEAV
Trigger: CACCGCCTCTGGGGGCAGTCAGGCACTGGACAAGCC...CTCAGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR GCA 90 bp AGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGAGATGGAGCTGGCCACGCTaGGGCCCTGCCATGGGGGTG +
Preference number: 4 (lower is better)
Translates to: RLKPWQRQRRLDSIGLLRWSWPR*GPAMGV
Trigger: CACCCCCATGGCAGGGCCGCAGCGTGGCCAGCTCCA...TCTCAGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR CCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCGGCCCTCCCGCCCCCTaGCCTCGAGTGTGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLGPPAP*PRVCEE
Trigger: CTCCTCGCACACTCGAGGCCAGGGGGCGGGAGGGCC...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR CCA 90 bp CAGGAGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTTCCAGAGCTTGGAGCTaGCCACGCTGCGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: QETQTLAEAAEAGQHRFASRAWS*PRCGPA
Trigger: GGCAGGGCCGCAGCGTGGCCAGCTCCAAGCTCTGGA...AGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR GCA 90 bp AGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGAGAGGACCGGTCCCAGGGTaGGGGAAGGTGGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: RLKPWQRQRRLDSIGLLRGPVPG*GKVGWV
Trigger: CACCCATCCCACCTTCCCGCACCCTGGGACCGGTCC...TCTCAGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR GCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCGGCACTTCAGGGGGCTaGCCCTGCAGGTCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLGTSGG*PCRSPP
Trigger: GGGAGGGGACCTGCAGGGGCAGCCCCCTGAAGTGCC...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTGGCCCTCCCGCCCCCTaGCCTCGAGTGTGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAGPPAP*PRVCEE
Trigger: CTCCTCGCACACTCGAGGCCAGGGGGCGGGAGGGCC...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR CCA 90 bp AGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGAGATGGAGGAGCGCTCGTTaGACCGGTCCCAGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: RLKPWQRQRRLDSIGLLRWRSAR*TGPRVR
Trigger: CCGCACCCTGGGACCGGTCCAACGAGCGCTCCTCCA...TCTCAGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR TCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCGGCTTGTCCAGTGCCTaGCTGCCCCCAGAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLGLSSA*LPPEAV
Trigger: CACCGCCTCTGGGGGCAGTCAGGCACTGGACAAGCC...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR GCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGGACCGGTCCCAGGGTaGGGGAAGGTGGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTGPVPG*GKVGWV
Trigger: CACCCATCCCACCTTCCCGCACCCTGGGACCGGTCC...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR GCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTCCCGGGCGAGGGCCATaGTACTGTGGAAGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTPGRGP*YCGRPW
Trigger: CCACGGCCTTCCACAGTAGCATGGCCCTCGCCCGGG...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCCCCGGGCGAGGGCCATaGTACTGTGGAAGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLPGRGP*YCGRPW
Trigger: CCACGGCCTTCCACAGTAGCATGGCCCTCGCCCGGG...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCTGGAGCTGGCCACGCTaGGGCCCTGCCATGGGGGTG +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLWSWPR*GPAMGV
Trigger: CACCCCCATGGCAGGGCCGCAGCGTGGCCAGCTCCA...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTAGGGCTGGAATGAGATaGGCGCCGCGGCGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTRAGMR*APRREG
Trigger: TCCCTCCCGCCGCGGCGCGCATCTCATTCCAGCCCT...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358409.7
CDS-3UTR GCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCCGACCGGTCCCAGGGTaGGGGAAGGTGGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLRPVPG*GKVGWV
Trigger: CACCCATCCCACCTTCCCGCACCCTGGGACCGGTCG...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397122.6
CDS-3UTR CCA 90 bp CAGGAGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTCAGGGTGCGGGAAGGTaGGATGGGTGCGCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: QETQTLAEAAEAGQHRFAQGAGR*DGCAKP
Trigger: TGGCTTAGCGCACCCATCCCACCTTCCCGCACCCTG...AGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR CCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTTGGAGGAGCGCTCGTTaGACCGGTCCCAGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTWRSAR*TGPRVR
Trigger: CCGCACCCTGGGACCGGTCCAACGAGCGCTCCTCCA...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR CCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCTGGAGGAGCGCTCGTTaGACCGGTCCCAGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLWRSAR*TGPRVR
Trigger: CCGCACCCTGGGACCGGTCCAACGAGCGCTCCTCCA...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR CCA 90 bp GAGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGAGCTCCAAGGCTCCGCTTaGAGGAGCGCTCGTTGGACC +
Preference number: 4 (lower is better)
Translates to: ETQTLAEAAEAGQHRFAELQGSA*RSARWT
Trigger: GGTCCAACGAGCGCTCCTCCAAGCGGAGCCTTGGAG...CTCAGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR CCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTTCCAGAGCTTGGAGCTaGCCACGCTGCGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTSRAWS*PRCGPA
Trigger: GGCAGGGCCGCAGCGTGGCCAGCTCCAAGCTCTGGA...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR TCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTGGCTTGTCCAGTGCCTaGCTGCCCCCAGAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAGLSSA*LPPEAV
Trigger: CACCGCCTCTGGGGGCAGTCAGGCACTGGACAAGCC...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR TCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTTCCTTGCCAAAACCCTaGGACTGCTGGGCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTSLPKP*DCWAAG
Trigger: CCCGGCCGCCCAGCAGTCTCAGGGTTTTGGCAAGGA...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359864.8
ENST00000397122.6
CDS-3UTR TCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCTCCTTGCCAAAACCCTaGGACTGCTGGGCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLSLPKP*DCWAAG
Trigger: CCCGGCCGCCCAGCAGTCTCAGGGTTTTGGCAAGGA...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTGGACCGGTCCCAGGGTaGGGGAAGGTGGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAGPVPG*GKVGWV
Trigger: CACCCATCCCACCTTCCCGCACCCTGGGACCGGTCC...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR GCA 90 bp GAGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGAGGGATCTCGCGAGCTTTaGGACGAGCCAGCACCTGGA +
Preference number: 4 (lower is better)
Translates to: ETQTLAEAAEAGQHRFAEGSREL*DEPAPG
Trigger: TCCAGGTGCTGGCTCGTCGCAAAGCTCGCGAGATCC...CTCAGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR GCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCGCGGCGATCGTTCTaGGGGGACGACAGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAPRRSF*GDDRAS
Trigger: TGACGCCCTGTCGTCCCCGCAGAACGATCGCCGCGG...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397122.6
CDS-3UTR CCA 90 bp AGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGAGATCCCCTCAGGGGAGGTaGGAGAGCTCCACTCGTTGG +
Preference number: 4 (lower is better)
Translates to: RLKPWQRQRRLDSIGLLRSPQGR*ESSTRW
Trigger: CCAACGAGTGGAGCTCTCCCACCTCCCCTGAGGGGA...TCTCAGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR CCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCTCCAGAGCTTGGAGCTaGCCACGCTGCGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLSRAWS*PRCGPA
Trigger: GGCAGGGCCGCAGCGTGGCCAGCTCCAAGCTCTGGA...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTTCCAGAGCTTGGAGCTaGCCACGCTGCGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTASRAWS*PRCGPA
Trigger: GGCAGGGCCGCAGCGTGGCCAGCTCCAAGCTCTGGA...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp AGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGAGACCAACATCCAGAGCTTaGAGCTGGCCACGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: RLKPWQRQRRLDSIGLLRPTSRA*SWPRCG
Trigger: GCCGCAGCGTGGCCAGCTCCAAGCTCTGGATGTTGG...TCTCAGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR CCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCGCGGAATGAGGGCTaGAATGAGATGCGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTARNEG*NEMRAA
Trigger: CGCGGCGCGCATCTCATTCCAGCCCTCATTCCGCGC...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358409.7
CDS-3UTR GCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTCCCTGGCCTCGAGTGTaGGAGGAGGACGCTGGAATG +
Preference number: 4 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTPWPRV*EEDAGM
Trigger: CATTCCAGCGTCCTCCTCGCACACTCGAGGCCAGGG...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR GCA 90 bp CAGGAGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGGAAGGTGGGATGGGTaGGCTAAGCCAGTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: QETQTLAEAAEAGQHRFAGRWDG*AKPVPR
Trigger: CCTTGGAACTGGCTTAGCGCACCCATCCCACCTTCC...AGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR CCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTCAGGGTGCGGGAAGGTaGGATGGGTGCGCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTQGAGR*DGCAKP
Trigger: TGGCTTAGCGCACCCATCCCACCTTCCCGCACCCTG...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCCTCCAAGGCTCCGCTTaGAGGAGCGCTCGTTGGACC +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLLQGSA*RSARWT
Trigger: GGTCCAACGAGCGCTCCTCCAAGCGGAGCCTTGGAG...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR CCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTCTCCAAGGCTCCGCTTaGAGGAGCGCTCGTTGGACC +
Preference number: 4 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTLQGSA*RSARWT
Trigger: GGTCCAACGAGCGCTCCTCCAAGCGGAGCCTTGGAG...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR CCA 90 bp AGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGAGATGGGACGTTCCGGCTTaGCCTGGCAAAGCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: RLKPWQRQRRLDSIGLLRWDVPA*PGKAPC
Trigger: GCAAGGAGCTTTGCCAGGCCAAGCCGGAACGTCCCA...TCTCAGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR CCA 90 bp AGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGAGAAGGAGACTCAAACCCTaGCAGAGGCAGCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RLKPWQRQRRLDSIGLLRRRLKP*QRQRRL
Trigger: CAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCTCCT...TCTCAGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR CCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTCCAACATCCAGAGCTTaGAGCTGGCCACGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTPTSRA*SWPRCG
Trigger: GCCGCAGCGTGGCCAGCTCCAAGCTCTGGATGTTGG...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGTGCGAGGAGGACGCTaGAATGCGCGGAATGAGGGC +
Preference number: 4 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTVRGGR*NARNEG
Trigger: GCCCTCATTCCGCGCATTCCAGCGTCCTCCTCGCAC...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358409.7
CDS-3UTR TCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTCCTCGTCCGACAGGATaGTTTTGCGCCTGCCACAGG +
Preference number: 4 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTPRPTG*FCACHR
Trigger: CCTGTGGCAGGCGCAAAATCATCCTGTCGGACGAGG...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR TCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCAGGCCGTGGCGGAGATaGTCTGTGCAGACGACATGG +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLRPWRR*SVQTTW
Trigger: CCATGTCGTCTGCACAGATCATCTCCGCCACGGCCT...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCCCTGGCCTCGAGTGTaGGAGGAGGACGCTGGAATG +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLPWPRV*EEDAGM
Trigger: CATTCCAGCGTCCTCCTCGCACACTCGAGGCCAGGG...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR GCA 90 bp AGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGAGAGCTCCACACGCCCTCTaGGTCATTGTCGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: RLKPWQRQRRLDSIGLLRAPHAL*VIVDGL
Trigger: AAGCCCATCGACAATGACGCAGAGGGCGTGTGGAGC...TCTCAGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR GCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCAGACCTGCTTCCTGGTaGGGGTCTTCCCTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLRPASW*GSSLSG
Trigger: TCCGGACAGGGAAGACCCGCACCAGGAAGCAGGTCT...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCGGATCTCGCGAGCTTTaGGACGAGCCAGCACCTGGA +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLGSREL*DEPAPG
Trigger: TCCAGGTGCTGGCTCGTCGCAAAGCTCGCGAGATCC...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGGATCTCGCGAGCTTTaGGACGAGCCAGCACCTGGA +
Preference number: 4 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTGSREL*DEPAPG
Trigger: TCCAGGTGCTGGCTCGTCGCAAAGCTCGCGAGATCC...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCAGGGTGCGGGAAGGTaGGATGGGTGCGCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLQGAGR*DGCAKP
Trigger: TGGCTTAGCGCACCCATCCCACCTTCCCGCACCCTG...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCTCCCCTCAGGGGAGGTaGGAGAGCTCCACTCGTTGG +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLSPQGR*ESSTRW
Trigger: CCAACGAGTGGAGCTCTCCCACCTCCCCTGAGGGGA...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR CCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCGCACCTGGATGTGGCTaGAGACCTGCTTCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLAPGCG*RPASWC
Trigger: GCACCAGGAAGCAGGTCTCCAGCCACATCCAGGTGC...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCAGGGCCATGCTACTGTaGAAGGCCGTGGCGGAGATG +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLRAMLL*KAVAEM
Trigger: CATCTCCGCCACGGCCTTCCACAGTAGCATGGCCCT...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GAGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGAGCGTTCCGGCTTGGCCTaGCAAAGCTCCTTGCCAAAA +
Preference number: 4 (lower is better)
Translates to: ETQTLAEAAEAGQHRFAERSGLA*QSSLPK
Trigger: TTTTGGCAAGGAGCTTTGCCAGGCCAAGCCGGAACG...CTCAGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR CCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCTGGGACGTTCCGGCTTaGCCTGGCAAAGCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLWDVPA*PGKAPC
Trigger: GCAAGGAGCTTTGCCAGGCCAAGCCGGAACGTCCCA...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTTGGGACGTTCCGGCTTaGCCTGGCAAAGCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTWDVPA*PGKAPC
Trigger: GCAAGGAGCTTTGCCAGGCCAAGCCGGAACGTCCCA...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCAACATCCAGAGCTTaGAGCTGGCCACGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAPTSRA*SWPRCG
Trigger: GCCGCAGCGTGGCCAGCTCCAAGCTCTGGATGTTGG...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCGGGGTCGCTGTAGCTTaGGCTGGACTGGCCAATGTG +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLGVAVA*AGLANV
Trigger: CACATTGGCCAGTCCAGCCCAAGCTACAGCGACCCC...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCTCCTCTCAGCTCTCTTaGCACTTCAGGGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLSSQLS*HFRGLP
Trigger: GGGCAGCCCCCTGAAGTGCCAAGAGAGCTGAGAGGA...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR TCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCCTCGTCCGACAGGATaGTTTTGCGCCTGCCACAGG +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLPRPTG*FCACHR
Trigger: CCTGTGGCAGGCGCAAAATCATCCTGTCGGACGAGG...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR TCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCTCCCTGTCCGGAGCTTaGTGTAGCGGGCAATCAGCT +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLSLSGA*CSGQSA
Trigger: AGCTGATTGCCCGCTACATCAAGCTCCGGACAGGGA...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR TCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCAGGCCGTGGCGGAGATaGTCTGTGCAGACGACATGG +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLRPWRR*SVQTTW
Trigger: CCATGTCGTCTGCACAGATCATCTCCGCCACGGCCT...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359864.8
ENST00000397122.6
CDS-3UTR TCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCCCCGTGCTCACTGGCTaGCACCTCAAAGACATAGGC +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLPVLTG*HLKDIG
Trigger: GCCTATGTCTTTGAGGTGTCAGCCAGTGAGCACGGG...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCACACGCCCTCTaGGTCATTGTCGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTAPHAL*VIVDGL
Trigger: AAGCCCATCGACAATGACGCAGAGGGCGTGTGGAGC...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR GCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCATGTGGCTGGAGACCTaGTTCCTGGTGCGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLMWLET*FLVRVF
Trigger: GAAGACCCGCACCAGGAAGCAGGTCTCCAGCCACAT...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTGGATCTCGCGAGCTTTaGGACGAGCCAGCACCTGGA +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAGSREL*DEPAPG
Trigger: TCCAGGTGCTGGCTCGTCGCAAAGCTCGCGAGATCC...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTTACGTGTCCGGGTCCTaGTGCTGCTCCAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAYVSGS*CCSRKA
Trigger: TGCCTTCCTGGAGCAGCAGCAGGACCCGGACACGTA...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCTACGTGTCCGGGTCCTaGTGCTGCTCCAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLYVSGS*CCSRKA
Trigger: TGCCTTCCTGGAGCAGCAGCAGGACCCGGACACGTA...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCGCGGGGACCGGTGGATaGGGTAAGAGTAGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLAGTGG*GKSSVH
Trigger: ATGGACACTACTCTTACCGCATCCACCGGTCCCCGC...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCACGTCCCCGTTTCCTaGACACACGTCTCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLHVPVS*THVSSP
Trigger: GGGGGAAGAGACGTGTGTGCAGGAAACGGGGACGTG...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp AGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGAGACTGCGTCATTGTCGATaGGCTTGTCCAGTGCCTGAC +
Preference number: 4 (lower is better)
Translates to: RLKPWQRQRRLDSIGLLRLRHCR*ACPVPD
Trigger: GTCAGGCACTGGACAAGCCCATCGACAATGACGCAG...TCTCAGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR CCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTGCACCTGGATGTGGCTaGAGACCTGCTTCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAAPGCG*RPASWC
Trigger: GCACCAGGAAGCAGGTCTCCAGCCACATCCAGGTGC...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCAGGGCCATGCTACTGTaGAAGGCCGTGGCGGAGATG +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLRAMLL*KAVAEM
Trigger: CATCTCCGCCACGGCCTTCCACAGTAGCATGGCCCT...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTAGGAGACTCAAACCCTaGCAGAGGCAGCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTARRLKP*QRQRRL
Trigger: CAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCTCCT...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCAGGAGACTCAAACCCTaGCAGAGGCAGCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLRRLKP*QRQRRL
Trigger: CAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCTCCT...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCCGCTGTAGCTTGGGCTaGACTGGCCAATGTGCACGA +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLRCSLG*TGQCAR
Trigger: TCGTGCACATTGGCCAGTCCAGCCCAAGCTACAGCG...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCTCCTCTCAGCTCTCTTaGCACTTCAGGGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLSSQLS*HFRGLP
Trigger: GGGCAGCCCCCTGAAGTGCCAAGAGAGCTGAGAGGA...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp AGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGAGAGCACCTGGATGTGGCTaGAGACCATACATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: RLKPWQRQRRLDSIGLLRAPGCG*RPYILP
Trigger: GGGCAAGATGTATGGTCTCCAGCCACATCCAGGTGC...TCTCAGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR TCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCTCCCTGTCCGGAGCTTaGTGTAGCGGGCAATCAGCT +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLSLSGA*CSGQSA
Trigger: AGCTGATTGCCCGCTACATCAAGCTCCGGACAGGGA...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR TCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTTCCCTGTCCGGAGCTTaGTGTAGCGGGCAATCAGCT +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTASLSGA*CSGQSA
Trigger: AGCTGATTGCCCGCTACATCAAGCTCCGGACAGGGA...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR TCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCCCGTGCTCACTGGCTaGCACCTCAAAGACATAGGC +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLPVLTG*HLKDIG
Trigger: GCCTATGTCTTTGAGGTGTCAGCCAGTGAGCACGGG...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR TCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCCGTGCTCACTGGCTaGCACCTCAAAGACATAGGC +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAPVLTG*HLKDIG
Trigger: GCCTATGTCTTTGAGGTGTCAGCCAGTGAGCACGGG...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTGGAAGGTGGGATGGGTaGGCTAAGCCAGTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAGRWDG*AKPVPR
Trigger: CCTTGGAACTGGCTTAGCGCACCCATCCCACCTTCC...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCGGAAGGTGGGATGGGTaGGCTAAGCCAGTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLGRWDG*AKPVPR
Trigger: CCTTGGAACTGGCTTAGCGCACCCATCCCACCTTCC...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCGCTCCACACGCCCTCTaGGTCATTGTCGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLAPHAL*VIVDGL
Trigger: AAGCCCATCGACAATGACGCAGAGGGCGTGTGGAGC...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR GCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCATGTGGCTGGAGACCTaGTTCCTGGTGCGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLMWLET*FLVRVF
Trigger: GAAGACCCGCACCAGGAAGCAGGTCTCCAGCCACAT...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTATGTGGCTGGAGACCTaGTTCCTGGTGCGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAMWLET*FLVRVF
Trigger: GAAGACCCGCACCAGGAAGCAGGTCTCCAGCCACAT...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCGCGGGGACCGGTGGATaGGGTAAGAGTAGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLAGTGG*GKSSVH
Trigger: ATGGACACTACTCTTACCGCATCCACCGGTCCCCGC...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCCTGCGTCATTGTCGATaGGCTTGTCCAGTGCCTGAC +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLLRHCR*ACPVPD
Trigger: GTCAGGCACTGGACAAGCCCATCGACAATGACGCAG...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR CCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTCGTTCCGGCTTGGCCTaGCAAAGCTCCTTGCCAAAA +
Preference number: 4 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTRSGLA*QSSLPK
Trigger: TTTTGGCAAGGAGCTTTGCCAGGCCAAGCCGGAACG...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp AGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGAGAAAAGGCTTCACATCATaGGACGTTCCGGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: RLKPWQRQRRLDSIGLLRKGFTS*DVPAWP
Trigger: AGGCCAAGCCGGAACGTCCCATGATGTGAAGCCTTT...TCTCAGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR CCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCGCTGTAGCTTGGGCTaGACTGGCCAATGTGCACGA +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTARCSLG*TGQCAR
Trigger: TCGTGCACATTGGCCAGTCCAGCCCAAGCTACAGCG...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGAGCCCCGTGCTCACTaGCTGACACCTCAAAGACAT +
Preference number: 4 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTEPRAH*LTPQRH
Trigger: ATGTCTTTGAGGTGTCAGCCAGTGAGCACGGGGCTC...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GAGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGAGAACTTTAGCTTGGCCTaGATCTCGCGAGCTTTGCGA +
Preference number: 4 (lower is better)
Translates to: ETQTLAEAAEAGQHRFAENFSLA*ISRALR
Trigger: TCGCAAAGCTCGCGAGATCCAGGCCAAGCTAAAGTT...CTCAGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR CCA 90 bp CAGGAGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGCCAAAACTTTAGCTTaGCCTGGATCTCGCGAGCTT +
Preference number: 4 (lower is better)
Translates to: QETQTLAEAAEAGQHRFAAKTLA*PGSREL
Trigger: AAGCTCGCGAGATCCAGGCCAAGCTAAAGTTTTGGC...AGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR TCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTCCTCGATGTTGGTGTTaGGGTCTGCCCAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTPRCWC*GLPRTS
Trigger: TGAAGTTCTGGGCAGACCTCAACACCAACATCGAGG...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCATGTGCACGAACAGGTaGTTGTTGTACGTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLMCTNR*LLYVSG
Trigger: CCCGGACACGTACAACAAGCACCTGTTCGTGCACAT...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTCTGGACTGGCCAATGTaGACGAACAGGTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTLDWPM*TNRCLL
Trigger: CAACAAGCACCTGTTCGTGCACATTGGCCAGTCCAG...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCCTGTTGGTGACCACCTaGAGGATGGTGAAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLLLVTT*RMVKFS
Trigger: GGAGAACTTCACCATCCTGCAGGTGGTCACCAACAG...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp AGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGAGACCTGGCAAAGCTCCTTaGCAAAACTTTAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: RLKPWQRQRRLDSIGLLRPGKAP*QNFSLA
Trigger: GGCCAAGCTAAAGTTTTGGCAAGGAGCTTTGCCAGG...TCTCAGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR CCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCTGCGTCATTGTCGATaGGCTTGTCCAGTGCCTGAC +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTALRHCR*ACPVPD
Trigger: GTCAGGCACTGGACAAGCCCATCGACAATGACGCAG...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR CCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCTCCTTTAGCTTGGCCTaGATCTCGCGAGCTTTGCGA +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLSFSLA*ISRALR
Trigger: TCGCAAAGCTCGCGAGATCCAGGCCAAGCTAAAGGA...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTGGTCCTTTAGCTTaGCCTGGATCTCGCGAGCTT +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAPGPLA*PGSREL
Trigger: AAGCTCGCGAGATCCAGGCCAAGCTAAAGGACCAGG...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTTTGTCCTTAGCTGCCTaGTCCTTTAGCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTLSLAA*SFSLAW
Trigger: CCAGGCCAAGCTAAAGGACCAGGCAGCTAAGGACAA...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCGTTCCGGCTTGGCCTaGCAAAGCTCCTTGCCAAAA +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTARSGLA*QSSLPK
Trigger: TTTTGGCAAGGAGCTTTGCCAGGCCAAGCCGGAACG...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCAAAGGCTTCACATCATaGGACGTTCCGGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLKGFTS*DVPAWP
Trigger: AGGCCAAGCCGGAACGTCCCATGATGTGAAGCCTTT...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCGGCTCTCATACTGGCTaGAGACCCCATAGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLGSHTG*RPHRRS
Trigger: GCTCCTTCTATGGGGTCTCCAGCCAGTATGAGAGCC...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTGGCTCTCATACTGGCTaGAGACCCCATAGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAGSHTG*RPHRRS
Trigger: GCTCCTTCTATGGGGTCTCCAGCCAGTATGAGAGCC...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTGAGCCCCGTGCTCACTaGCTGACACCTCAAAGACAT +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAEPRAH*LTPQRH
Trigger: ATGTCTTTGAGGTGTCAGCCAGTGAGCACGGGGCTC...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCGGGTTTATTTGGGGTTaGGCACCTCAGGTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLGFIWG*APQVQA
Trigger: TGCCTGAACCTGAGGTGCCCAACCCCAAATAAACCC...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR TCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGTTCGAAGAGATCCTTaGGTCCACCCTTTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTVRRDP*VHPFSP
Trigger: CGGAGAAAAAGGGTGGACTCAAGGATCTCTTCGAAC...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR TCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCCTCGATGTTGGTGTTaGGGTCTGCCCAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLPRCWC*GLPRTS
Trigger: TGAAGTTCTGGGCAGACCTCAACACCAACATCGAGG...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCCTGGCAAAGCTCCTTaGCAAAACCCTGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLPGKAP*QNPETA
Trigger: AGCAGTCTCAGGGTTTTGGCAAGGAGCTTTGCCAGG...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTATGTGCACGAACAGGTaGTTGTTGTACGTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAMCTNR*LLYVSG
Trigger: CCCGGACACGTACAACAAGCACCTGTTCGTGCACAT...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTGTTGGTGACCACCTaGAGGATGGTGAAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLLLVTT*RMVKFS
Trigger: GGAGAACTTCACCATCCTGCAGGTGGTCACCAACAG...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCTGTTGGTGACCACCTaGAGGATGGTGAAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTALLVTT*RMVKFS
Trigger: GGAGAACTTCACCATCCTGCAGGTGGTCACCAACAG...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCCCTGGCAAAGCTCCTTaGCAAAACTTTAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLPGKAP*QNFSLA
Trigger: GGCCAAGCTAAAGTTTTGGCAAGGAGCTTTGCCAGG...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358409.7
CDS-3UTR CCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTTCCTTTAGCTTGGCCTaGATCTCGCGAGCTTTGCGA +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTASFSLA*ISRALR
Trigger: TCGCAAAGCTCGCGAGATCCAGGCCAAGCTAAAGGA...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTTTGTCCTTAGCTGCCTaGTCCTTTAGCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTALSLAA*SFSLAW
Trigger: CCAGGCCAAGCTAAAGGACCAGGCAGCTAAGGACAA...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTAAAGGCTTCACATCATaGGACGTTCCGGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAKGFTS*DVPAWP
Trigger: AGGCCAAGCCGGAACGTCCCATGATGTGAAGCCTTT...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCGGGTTTATTTGGGGTTaGGCACCTCAGGTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLGFIWG*APQVQA
Trigger: TGCCTGAACCTGAGGTGCCCAACCCCAAATAAACCC...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTGGGTTTATTTGGGGTTaGGCACCTCAGGTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAGFIWG*APQVQA
Trigger: TGCCTGAACCTGAGGTGCCCAACCCCAAATAAACCC...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTAACTTTAGCTTGGCCTaGATCTCGCGAGCTTTGCGA +
Preference number: 4 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTNFSLA*ISRALR
Trigger: TCGCAAAGCTCGCGAGATCCAGGCCAAGCTAAAGTT...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358409.7
CDS-3UTR TCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCGTTCGAAGAGATCCTTaGGTCCACCCTTTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLVRRDP*VHPFSP
Trigger: CGGAGAAAAAGGGTGGACTCAAGGATCTCTTCGAAC...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTCATCTTGGGTTTATTTaGGGTTGGGCACCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTHLGFI*GWAPQV
Trigger: AACCTGAGGTGCCCAACCCCAAATAAACCCAAGATG...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTGCCAAAACTTTAGCTTaGCCTGGATCTCGCGAGCTT +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAAKTLA*PGSREL
Trigger: AAGCTCGCGAGATCCAGGCCAAGCTAAAGTTTTGGC...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358409.7
CDS-3UTR GCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCAAAGACATAGGCAATaGACAGCAAGGTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAQRHRQ*TARSPV
Trigger: CACAGGAGACCTTGCTGTGCATTGCCTATGTCTTTG...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR GCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCAAAGACATAGGCAATaGACAGCAAGGTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLQRHRQ*TARSPV
Trigger: CACAGGAGACCTTGCTGTGCATTGCCTATGTCTTTG...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCATCTTGGGTTTATTTaGGGTTGGGCACCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAHLGFI*GWAPQV
Trigger: AACCTGAGGTGCCCAACCCCAAATAAACCCAAGATG...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCATCTTGGGTTTATTTaGGGTTGGGCACCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLHLGFI*GWAPQV
Trigger: AACCTGAGGTGCCCAACCCCAAATAAACCCAAGATG...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCAAATACACAGCATCTTaGGTTTATTTGGGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLKYTAS*VYLGLG
Trigger: GCCCAACCCCAAATAAACCCAAGATGCTGTGTATTT...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CCA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTAAATACACAGCATCTTaGGTTTATTTGGGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAKYTAS*VYLGLG
Trigger: GCCCAACCCCAAATAAACCCAAGATGCTGTGTATTT...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359864.8
ENST00000397122.6
CDS GCA 90 bp GGAGTCCGCCCCGAGCGCCAACTCTTCCGGCCGCGGCGATCGTTCTaGGGGGACGACAGGGCGTCAGCGCGCAGAGCCGGGCTCCGGCCG +
Preference number: 5 (lower is better)
Translates to: GVRPERQLFRPRRSF*GDDRASARRAGLRP
Trigger: CGGCCGGAGCCCGGCTCTGCGCGCTGACGCCCTGTCGTCCCCGCAGAACGATCGCCGCGGCCGGAAGAGTTGGCGCTCGGGGCGGACTCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543035.6
CDS CCA 90 bp TCTGGCGGGACGCGGCGGCGCCGGAGCTGCGGCCCTCCCGCCCCCTaGCCTCGAGTGTGCGAGGAGGACGCTGGAATGCGCGGAATGAGG +
Preference number: 5 (lower is better)
Translates to: SGGTRRRRSCGPPAP*PRVCEEDAGMRGMR
Trigger: CCTCATTCCGCGCATTCCAGCGTCCTCCTCGCACACTCGAGGCCAGGGGGCGGGAGGGCCGCAGCTCCGGCGCCGCCGCGTCCCGCCAGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358409.7
CDS GCA 90 bp CGGCGGCGCCGGAGCTGCGGCCCTCCCGCCCCCTGGCCTCGAGTGTaGGAGGAGGACGCTGGAATGCGCGGAATGAGGGCTGGAATGAGA +
Preference number: 5 (lower is better)
Translates to: RRRRSCGPPAPWPRV*EEDAGMRGMRAGMR
Trigger: TCTCATTCCAGCCCTCATTCCGCGCATTCCAGCGTCCTCCTCGCACACTCGAGGCCAGGGGGCGGGAGGGCCGCAGCTCCGGCGCCGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358409.7
CDS GCA 90 bp TGGAGCCGCTTCGCCTCCAGCAGCCTCAGTCGCGCCGCCTCCACGTaGCTCGCTCTTCCCAGTCTCGTCCCGGGAGGGAGCTCCGCACGC +
Preference number: 5 (lower is better)
Translates to: WSRFASSSLSRAAST*LALPSLVPGGSSAR
Trigger: GCGTGCGGAGCTCCCTCCCGGGACGAGACTGGGAAGAGCGAGGCACGTGGAGGCGGCGCGACTGAGGCTGCTGGAGGCGAAGCGGCTCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536826.2
ENST00000540314.2
CDS CCA 90 bp CTGCGGCCCTCCCGCCCCCTGGCCTCGAGTGTGCGAGGAGGACGCTaGAATGCGCGGAATGAGGGCTGGAATGAGATGCGCGCCGCGGCG +
Preference number: 5 (lower is better)
Translates to: LRPSRPLASSVRGGR*NARNEGWNEMRAAA
Trigger: CGCCGCGGCGCGCATCTCATTCCAGCCCTCATTCCGCGCATTCCAGCGTCCTCCTCGCACACTCGAGGCCAGGGGGCGGGAGGGCCGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358409.7
CDS GCA 90 bp CAGTCTCGTCCCGGGAGGGAGCTCCGCACGCACCGCGCAGACTCCTaGCCTCCGGCAAAGTCCTACCAAGTCCCCGCGCCCCAGCCTTAC +
Preference number: 5 (lower is better)
Translates to: QSRPGRELRTHRADS*PPAKSYQVPAPQPY
Trigger: GTAAGGCTGGGGCGCGGGGACTTGGTAGGACTTTGCCGGAGGGCAGGAGTCTGCGCGGTGCGTGCGGAGCTCCCTCCCGGGACGAGACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536826.2
ENST00000540314.2
CDS CCA 90 bp GAGACTGCTGGGCGGCCGGGGCCCCGGGCGAGGGCCATGCTACTGTaGAAGGCCGTGGCGGAGATGATCTGTGCAGACGACATGGCAGCC +
Preference number: 5 (lower is better)
Translates to: ETAGRPGPRARAMLL*KAVAEMICADDMAA
Trigger: GGCTGCCATGTCGTCTGCACAGATCATCTCCGCCACGGCCTTCCACAGTAGCATGGCCCTCGCCCGGGGCCCCGGCCGCCCAGCAGTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359864.8
ENST00000397122.6
ENST00000543035.6
ENST00000544666.1
CDS CCA 90 bp CCTGCTGCTGCTCCAGGAAGGCAGAGAACTCCAACATCCAGAGCTTaGAGCTGGCCACGCTGCGGCCCTGCCATGGGGGTGCCGGGGGCG +
Preference number: 5 (lower is better)
Translates to: PAAAPGRQRTPTSRA*SWPRCGPAMGVPGA
Trigger: CGCCCCCGGCACCCCCATGGCAGGGCCGCAGCGTGGCCAGCTCCAAGCTCTGGATGTTGGAGTTCTCTGCCTTCCTGGAGCAGCAGCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
ENST00000544666.1
CDS-3UTR CAA 90 bp AGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGAGATTGGAGGAGCGCTCGTaGGACCGGTCCCAGGGTGCG +
Preference number: 5 (lower is better)
Translates to: RLKPWQRQRRLDSIGLLRLEERS*DRSQGA
Trigger: CGCACCCTGGGACCGGTCCAACGAGCGCTCCTCCAA...TCTCAGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS GCA 90 bp GAGGCATGGGTGCTGGGTCTCTTCTGTTGCCGATGCTCTCGGTTCTaGCTCTCCGGTCCTTTCCACACCGGCCTCCCTTTCCCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: EAWVLGLFCCRCSRF*LSGPFHTGLPFPQS
Trigger: ACTTTGGGGGAAAGGGAGGCCGGTGTGGAAAGGACCGGAGAGGCAGAACCGAGAGCATCGGCAACAGAAGAGACCCAGCACCCATGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540314.2
CDS GCA 90 bp CCCAGCAGAAAAGAGGCATGGGTGCTGGGTCTCTTCTGTTGCCGATaGTCTCGGTTCTGCCTCTCCGGTCCTTTCCACACCGGCCTCCCT +
Preference number: 5 (lower is better)
Translates to: PSRKEAWVLGLFCCR*SRFCLSGPFHTGLP
Trigger: AGGGAGGCCGGTGTGGAAAGGACCGGAGAGGCAGAACCGAGAGCATCGGCAACAGAAGAGACCCAGCACCCATGCCTCTTTTCTGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540314.2
CDS-3UTR CAA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTTTGGAGGAGCGCTCGTaGGACCGGTCCCAGGGTGCG +
Preference number: 5 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTLEERS*DRSQGA
Trigger: CGCACCCTGGGACCGGTCCAACGAGCGCTCCTCCAA...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR CAA 90 bp CAGGAGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGGAGAGCTCCACTCGTaGGAGGTAATGGTGCCGGCC +
Preference number: 5 (lower is better)
Translates to: QETQTLAEAAEAGQHRFAGELHS*EVMVPA
Trigger: GGCCGGCACCATTACCTCCAACGAGTGGAGCTCTCC...AGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR CAA 90 bp CAGGAGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTTGGATCTCGCGAGCTTaGCGACGAGCCAGCACCTGG +
Preference number: 5 (lower is better)
Translates to: QETQTLAEAAEAGQHRFAWISRA*RRASTW
Trigger: CCAGGTGCTGGCTCGTCGCAAAGCTCGCGAGATCCA...AGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS GCA 90 bp AAAGGGCCCAGCAGAAAAGAGGCATGGGTGCTGGGTCTCTTCTGTTaGCGATGCTCTCGGTTCTGCCTCTCCGGTCCTTTCCACACCGGC +
Preference number: 5 (lower is better)
Translates to: KGPSRKEAWVLGLFC*RCSRFCLSGPFHTG
Trigger: GCCGGTGTGGAAAGGACCGGAGAGGCAGAACCGAGAGCATCGGCAACAGAAGAGACCCAGCACCCATGCCTCTTTTCTGCTGGGCCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540314.2
CDS GCA 90 bp CTCCCTTCCAGGCTCGAAAAGGGCCCAGCAGAAAAGAGGCATGGGTaGTGGGTCTCTTCTGTTGCCGATGCTCTCGGTTCTGCCTCTCCG +
Preference number: 5 (lower is better)
Translates to: LPSRLEKGPAEKRHG*WVSSVADALGSASP
Trigger: CGGAGAGGCAGAACCGAGAGCATCGGCAACAGAAGAGACCCAGCACCCATGCCTCTTTTCTGCTGGGCCCTTTTCGAGCCTGGAAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540314.2
CDS-3UTR CAA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTTTGGAGGAGCGCTCGTaGGACCGGTCCCAGGGTGCG +
Preference number: 5 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTALEERS*DRSQGA
Trigger: CGCACCCTGGGACCGGTCCAACGAGCGCTCCTCCAA...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR CAA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCCTCCAAGGCTCCGCTaGGAGGAGCGCTCGTTGGAC +
Preference number: 5 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLPPRLR*EERSLD
Trigger: GTCCAACGAGCGCTCCTCCAAGCGGAGCCTTGGAGG...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR CAA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCCAAGGCTCCGCTaGGAGGAGCGCTCGTTGGAC +
Preference number: 5 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAPPRLR*EERSLD
Trigger: GTCCAACGAGCGCTCCTCCAAGCGGAGCCTTGGAGG...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR CAA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCGGAGAGCTCCACTCGTaGGAGGTAATGGTGCCGGCC +
Preference number: 5 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLGELHS*EVMVPA
Trigger: GGCCGGCACCATTACCTCCAACGAGTGGAGCTCTCC...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR CAA 90 bp GAGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGAGACGCCCTCTGCGTCATaGTCGATGGGCTTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: ETQTLAEAAEAGQHRFAETPSAS*SMGLSS
Trigger: ACTGGACAAGCCCATCGACAATGACGCAGAGGGCGT...CTCAGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR CAA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTTGGATCTCGCGAGCTTaGCGACGAGCCAGCACCTGG +
Preference number: 5 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTWISRA*RRASTW
Trigger: CCAGGTGCTGGCTCGTCGCAAAGCTCGCGAGATCCA...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp AGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGAGAATGGGACGTTCCGGCTaGGCCTGGCAAAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: RLKPWQRQRRLDSIGLLRMGRSG*AWQSSL
Trigger: CAAGGAGCTTTGCCAGGCCAAGCCGGAACGTCCCAT...TCTCAGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR CAA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCTGGATCTCGCGAGCTTaGCGACGAGCCAGCACCTGG +
Preference number: 5 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLWISRA*RRASTW
Trigger: CCAGGTGCTGGCTCGTCGCAAAGCTCGCGAGATCCA...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCGCCTGGTCCTTTAGCTaGGCCTGGATCTCGCGAGCT +
Preference number: 5 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLAWSFS*AWISRA
Trigger: AGCTCGCGAGATCCAGGCCAAGCTAAAGGACCAGGC...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTATGCTCTGCAGGGCCTaGTCCTTAGCTGCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTMLCRA*SLAAWS
Trigger: GGACCAGGCAGCTAAGGACAAGGCCCTGCAGAGCAT...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTATGGGACGTTCCGGCTaGGCCTGGCAAAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTMGRSG*AWQSSL
Trigger: CAAGGAGCTTTGCCAGGCCAAGCCGGAACGTCCCAT...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCTCCTCTCAGCTCTCTaGGCACTTCAGGGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTALLSAL*ALQGAA
Trigger: GGCAGCCCCCTGAAGTGCCAAGAGAGCTGAGAGGAG...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp GAGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGAGTGGAGACCATACATCTaGCCCTCGTCCGACAGGATG +
Preference number: 5 (lower is better)
Translates to: ETQTLAEAAEAGQHRFAEWRPYI*PSSDRM
Trigger: CATCCTGTCGGACGAGGGCAAGATGTATGGTCTCCA...CTCAGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR CAA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTATGCTCTGCAGGGCCTaGTCCTTAGCTGCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAMLCRA*SLAAWS
Trigger: GGACCAGGCAGCTAAGGACAAGGCCCTGCAGAGCAT...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTTGCACGAACAGGTGCTaGTTGTACGTGTCCGGGTCC +
Preference number: 5 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTCTNRC*LYVSGS
Trigger: GGACCCGGACACGTACAACAAGCACCTGTTCGTGCA...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCTGCACGAACAGGTGCTaGTTGTACGTGTCCGGGTCC +
Preference number: 5 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLCTNRC*LYVSGS
Trigger: GGACCCGGACACGTACAACAAGCACCTGTTCGTGCA...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCAGGGGTCGCTGTAGCTaGGGCTGGACTGGCCAATGT +
Preference number: 5 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLRGRCS*GWTGQC
Trigger: ACATTGGCCAGTCCAGCCCAAGCTACAGCGACCCCT...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTAGGGGTCGCTGTAGCTaGGGCTGGACTGGCCAATGT +
Preference number: 5 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTARGRCS*GWTGQC
Trigger: ACATTGGCCAGTCCAGCCCAAGCTACAGCGACCCCT...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp GAGACTCAAACCCTGGCAGAGGCAGCGGAGGCTGGACAGCATAGGTTTGCTGAGTGCCAAAACTTTAGCTaGGCCTGGATCTCGCGAGCT +
Preference number: 5 (lower is better)
Translates to: ETQTLAEAAEAGQHRFAECQNFS*AWISRA
Trigger: AGCTCGCGAGATCCAGGCCAAGCTAAAGTTTTGGCA...CTCAGCAAACCTATGCTGTCCAGCCTCCGCTGCCTCTGCCAGGGTTTGAGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR CAA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTACGCCCTCTGCGTCATaGTCGATGGGCTTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTATPSAS*SMGLSS
Trigger: ACTGGACAAGCCCATCGACAATGACGCAGAGGGCGT...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR CAA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCACGCCCTCTGCGTCATaGTCGATGGGCTTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLTPSAS*SMGLSS
Trigger: ACTGGACAAGCCCATCGACAATGACGCAGAGGGCGT...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR CAA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTCCTTCATCCTCGATGTaGGTGTTGAGGTCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTPSSSM*VLRSAQ
Trigger: CTGGGCAGACCTCAACACCAACATCGAGGATGAAGG...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTTCCTGTGTGTCTCTGTaGGTGACCACCTGCAGGATG +
Preference number: 5 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTSCVSL*VTTCRM
Trigger: CATCCTGCAGGTGGTCACCAACAGAGACACACAGGA...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTTGGGTTTATTTGGGGTaGGGCACCTCAGGTTCAGGC +
Preference number: 5 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTWVYLG*GTSGSG
Trigger: GCCTGAACCTGAGGTGCCCAACCCCAAATAAACCCA...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCTGGGTTTATTTGGGGTaGGGCACCTCAGGTTCAGGC +
Preference number: 5 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLWVYLG*GTSGSG
Trigger: GCCTGAACCTGAGGTGCCCAACCCCAAATAAACCCA...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS GCA 90 bp AAGCTCCTTGCCAAAACTTTAGCTTGGCCTGGATCTCGCGAGCTTTaGGACGAGCCAGCACCTGGATGTGGCTGGAGACCATACATCTTG +
Preference number: 5 (lower is better)
Translates to: KLLAKTLAWPGSREL*DEPAPGCGWRPYIL
Trigger: CAAGATGTATGGTCTCCAGCCACATCCAGGTGCTGGCTCGTCGCAAAGCTCGCGAGATCCAGGCCAAGCTAAAGTTTTGGCAAGGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS-3UTR CAA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCTTCCGACCATACATCTaGCCCTCGTCCGACAGGATG +
Preference number: 5 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLFRPYI*PSSDRM
Trigger: CATCCTGTCGGACGAGGGCAAGATGTATGGTCGGAA...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR CAA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTTTCCGACCATACATCTaGCCCTCGTCCGACAGGATG +
Preference number: 5 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAFRPYI*PSSDRM
Trigger: CATCCTGTCGGACGAGGGCAAGATGTATGGTCGGAA...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS-3UTR CAA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCCTTCATCCTCGATGTaGGTGTTGAGGTCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLPSSSM*VLRSAQ
Trigger: CTGGGCAGACCTCAACACCAACATCGAGGATGAAGG...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTTCATCCTCGATGTaGGTGTTGAGGTCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAPSSSM*VLRSAQ
Trigger: CTGGGCAGACCTCAACACCAACATCGAGGATGAAGG...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCTCCTGTGTGTCTCTGTaGGTGACCACCTGCAGGATG +
Preference number: 5 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLSCVSL*VTTCRM
Trigger: CATCCTGCAGGTGGTCACCAACAGAGACACACAGGA...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTTGGGTTTATTTGGGGTaGGGCACCTCAGGTTCAGGC +
Preference number: 5 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAWVYLG*GTSGSG
Trigger: GCCTGAACCTGAGGTGCCCAACCCCAAATAAACCCA...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCGCATCTTGGGTTTATTaGGGGTTGGGCACCTCAGGT +
Preference number: 5 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLASWVY*GLGTSG
Trigger: ACCTGAGGTGCCCAACCCCAAATAAACCCAAGATGC...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTTGCCAAAACTTTAGCTaGGCCTGGATCTCGCGAGCT +
Preference number: 5 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTCQNFS*AWISRA
Trigger: AGCTCGCGAGATCCAGGCCAAGCTAAAGTTTTGGCA...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358409.7
CDS-3UTR CAA 90 bp GGGGTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTCGTTCGAAGAGATCCTaGAGTCCACCCTTTTTCTCC +
Preference number: 5 (lower is better)
Translates to: GVGHLRFRHSLFLGRVTTRSKRS*SPPFFS
Trigger: GGAGAAAAAGGGTGGACTCAAGGATCTCTTCGAACG...AGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAACCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTTCCTCGATGTTGGTGTaGAGGTCTGCCCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTASSMLV*RSAQNF
Trigger: GAAGTTCTGGGCAGACCTCAACACCAACATCGAGGA...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCAGGTTCAGGCACAGTTaGTTCCTGGGTAGAGTCACA +
Preference number: 5 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLRFRHS*FLGRVT
Trigger: TGTGACTCTACCCAGGAACAAACTGTGCCTGAACCT...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTGCATCTTGGGTTTATTaGGGGTTGGGCACCTCAGGT +
Preference number: 5 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTAASWVY*GLGTSG
Trigger: ACCTGAGGTGCCCAACCCCAAATAAACCCAAGATGC...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCGCATCTTGGGTTTATTaGGGGTTGGGCACCTCAGGT +
Preference number: 5 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLASWVY*GLGTSG
Trigger: ACCTGAGGTGCCCAACCCCAAATAAACCCAAGATGC...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCGAATTTGTCATAGATTaGGCGGATGTCCACGGCTTC +
Preference number: 5 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLEFVID*ADVHGF
Trigger: GAAGCCGTGGACATCCGCCAAATCTATGACAAATTC...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCGTTCGAAGAGATCCTaGAGTCCACCCTTTTTCTCC +
Preference number: 5 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLRSKRS*SPPFFS
Trigger: GGAGAAAAAGGGTGGACTCAAGGATCTCTTCGAACG...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCGTTCGAAGAGATCCTaGAGTCCACCCTTTTTCTCC +
Preference number: 5 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTARSKRS*SPPFFS
Trigger: GGAGAAAAAGGGTGGACTCAAGGATCTCTTCGAACG...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCAGGTTCAGGCACAGTTaGTTCCTGGGTAGAGTCACA +
Preference number: 5 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLRFRHS*FLGRVT
Trigger: TGTGACTCTACCCAGGAACAAACTGTGCCTGAACCT...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp GTTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTAGGTTCAGGCACAGTTaGTTCCTGGGTAGAGTCACA +
Preference number: 5 (lower is better)
Translates to: VGHLRFRHSLFLGRVTTARFRHS*FLGRVT
Trigger: TGTGACTCTACCCAGGAACAAACTGTGCCTGAACCT...AGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCGAATTTGTCATAGATTaGGCGGATGTCCACGGCTTC +
Preference number: 5 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLEFVID*ADVHGF
Trigger: GAAGCCGTGGACATCCGCCAAATCTATGACAAATTC...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp GGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCCTCAAAATACACAGCATCTaGGGTTTATTTGGGGTTGGG +
Preference number: 5 (lower is better)
Translates to: GTSGSGTVCSWVESQLLLKIHSI*GLFGVG
Trigger: CCCAACCCCAAATAAACCCAAGATGCTGTGTATTTT...GAGGAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359864.8
ENST00000397122.6
CDS-3UTR CAA 90 bp TTGGGCACCTCAGGTTCAGGCACAGTTTGTTCCTGGGTAGAGTCACAACTGCTCAAAATACACAGCATCTaGGGTTTATTTGGGGTTGGG +
Preference number: 5 (lower is better)
Translates to: LGTSGSGTVCSWVESQLLKIHSI*GLFGVG
Trigger: CCCAACCCCAAATAAACCCAAGATGCTGTGTATTTT...GAGCAGTTGTGACTCTACCCAGGAACAAACTGTGCCTGAACCTGAGGTGCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359864.8
ENST00000397122.6
CDS GCA 72 bp GGCGATCGTTCTGGCGGGACGCGGCGGCGCCGGAGCTaGGGCCCTCCCGCCCCCTGGCCTCGAGTGTGCGAG +
Preference number: 6 (lower is better)
Translates to: GDRSGGTRRRRS*GPPAPWPRVCE
Trigger: CTCGCACACTCGAGGCCAGGGGGCGGGAGGGCCGCAGCTCCGGCGCCGCCGCGTCCCGCCAGAACGATCGCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000536826.2
ENST00000540314.2
CDS CCA 72 bp ACGCGGCGGCGCCGGAGCTGCGGCCCTCCCGCCCCCTaGCCTCGAGTGTGCGAGGAGGACGCTGGAATGCGC +
Preference number: 6 (lower is better)
Translates to: TRRRRSCGPPAP*PRVCEEDAGMR
Trigger: GCGCATTCCAGCGTCCTCCTCGCACACTCGAGGCCAGGGGGCGGGAGGGCCGCAGCTCCGGCGCCGCCGCGT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358409.7
ENST00000359864.8
CDS GCA 72 bp CCCGAGCGCCAACTCTTCCGGCCGCGGCGATCGTTCTaGGGGGACGACAGGGCGTCAGCGCGCAGAGCCGGG +
Preference number: 6 (lower is better)
Translates to: PERQLFRPRRSF*GDDRASARRAG
Trigger: CCCGGCTCTGCGCGCTGACGCCCTGTCGTCCCCGCAGAACGATCGCCGCGGCCGGAAGAGTTGGCGCTCGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543035.6
CDS GCA 72 bp CCCGGGAGGGAGCTCCGCACGCACCGCGCAGACTCCTaGCCTCCGGCAAAGTCCTACCAAGTCCCCGCGCCC +
Preference number: 6 (lower is better)
Translates to: PGRELRTHRADS*PPAKSYQVPAP
Trigger: GGGCGCGGGGACTTGGTAGGACTTTGCCGGAGGGCAGGAGTCTGCGCGGTGCGTGCGGAGCTCCCTCCCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536826.2
ENST00000540314.2
CDS GCA 72 bp CGGAGCTGCGGCCCTCCCGCCCCCTGGCCTCGAGTGTaGGAGGAGGACGCTGGAATGCGCGGAATGAGGGCT +
Preference number: 6 (lower is better)
Translates to: RSCGPPAPWPRV*EEDAGMRGMRA
Trigger: AGCCCTCATTCCGCGCATTCCAGCGTCCTCCTCGCACACTCGAGGCCAGGGGGCGGGAGGGCCGCAGCTCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358409.7
CDS CCA 72 bp GGGCGGCCGGGGCCCCGGGCGAGGGCCATGCTACTGTaGAAGGCCGTGGCGGAGATGATCTGTGCAGACGAC +
Preference number: 6 (lower is better)
Translates to: GRPGPRARAMLL*KAVAEMICADD
Trigger: GTCGTCTGCACAGATCATCTCCGCCACGGCCTTCCACAGTAGCATGGCCCTCGCCCGGGGCCCCGGCCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359864.8
ENST00000397122.6
ENST00000543035.6
ENST00000544666.1
CDS CCA 72 bp GGTAATGGTGCCGGCCGTGCCCTCCAAGGCTCCGCTTaGAGGAGCGCTCGTTGGACCCGCCCCTGGAGCCGC +
Preference number: 6 (lower is better)
Translates to: GNGAGRALQGSA*RSARWTRPWSR
Trigger: GCGGCTCCAGGGGCGGGTCCAACGAGCGCTCCTCCAAGCGGAGCCTTGGAGGGCACGGCCGGCACCATTACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536826.2
CDS CCA 72 bp GGTAATGGTGCCGGCCGTGCCCTCCAAGGCTCCGCTTaGAGGAGCGCTCGTTGGACCGGTCCCAGGGTGCGG +
Preference number: 6 (lower is better)
Translates to: GNGAGRALQGSA*RSARWTGPRVR
Trigger: CCGCACCCTGGGACCGGTCCAACGAGCGCTCCTCCAAGCGGAGCCTTGGAGGGCACGGCCGGCACCATTACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358409.7
ENST00000359864.8
ENST00000443986.3
ENST00000543035.6
CDS CCA 72 bp GTGCGAGGAGGACGCTGGAATGCGCGGAATGAGGGCTaGAATGAGATGCGCGCCGCGGCGGGAGGGAGGGAG +
Preference number: 6 (lower is better)
Translates to: VRGGRWNARNEG*NEMRAAAGGRE
Trigger: CTCCCTCCCTCCCGCCGCGGCGCGCATCTCATTCCAGCCCTCATTCCGCGCATTCCAGCGTCCTCCTCGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358409.7
CDS CCA 72 bp TCCCGCCCCCTGGCCTCGAGTGTGCGAGGAGGACGCTaGAATGCGCGGAATGAGGGCTGGAATGAGATGCGC +
Preference number: 6 (lower is better)
Translates to: SRPLASSVRGGR*NARNEGWNEMR
Trigger: GCGCATCTCATTCCAGCCCTCATTCCGCGCATTCCAGCGTCCTCCTCGCACACTCGAGGCCAGGGGGCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358409.7
CDS CCA 72 bp GGTAATGGTGCCGGCCGTGCCCTCCAAGGCTCCGCTTaGAGGAGCGCTCGTTGGACCTCCAGGTCTCTCCCT +
Preference number: 6 (lower is better)
Translates to: GNGAGRALQGSA*RSARWTSRSLP
Trigger: AGGGAGAGACCTGGAGGTCCAACGAGCGCTCCTCCAAGCGGAGCCTTGGAGGGCACGGCCGGCACCATTACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540314.2
CDS CCA 72 bp GCCTGGATCTCGCGAGCTTTGCGACGAGCCAGCACCTaGATGTGGCTGGAGACCATACATCTTGCCCTCGTC +
Preference number: 6 (lower is better)
Translates to: AWISRALRRAST*MWLETIHLALV
Trigger: GACGAGGGCAAGATGTATGGTCTCCAGCCACATCCAGGTGCTGGCTCGTCGCAAAGCTCGCGAGATCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443986.3
CDS GCA 72 bp AAAGAGGCATGGGTGCTGGGTCTCTTCTGTTGCCGATaGTCTCGGTTCTGCCTCTCCGGTCCTTTCCACACC +
Preference number: 6 (lower is better)
Translates to: KEAWVLGLFCCR*SRFCLSGPFHT
Trigger: GGTGTGGAAAGGACCGGAGAGGCAGAACCGAGAGCATCGGCAACAGAAGAGACCCAGCACCCATGCCTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540314.2
CDS GCA 72 bp AGCAGAAAAGAGGCATGGGTGCTGGGTCTCTTCTGTTaGCGATGCTCTCGGTTCTGCCTCTCCGGTCCTTTC +
Preference number: 6 (lower is better)
Translates to: SRKEAWVLGLFC*RCSRFCLSGPF
Trigger: GAAAGGACCGGAGAGGCAGAACCGAGAGCATCGGCAACAGAAGAGACCCAGCACCCATGCCTCTTTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540314.2
CDS GCA 72 bp AGGCTCGAAAAGGGCCCAGCAGAAAAGAGGCATGGGTaGTGGGTCTCTTCTGTTGCCGATGCTCTCGGTTCT +
Preference number: 6 (lower is better)
Translates to: RLEKGPAEKRHG*WVSSVADALGS
Trigger: AGAACCGAGAGCATCGGCAACAGAAGAGACCCAGCACCCATGCCTCTTTTCTGCTGGGCCCTTTTCGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540314.2
CDS CAA 72 bp CAGCAGAAAAGAGGCATGGGTGCTGGGTCTCTTCTGTaGCCGATGCTCTCGGTTCTGCCTCTCCGGTCCTTT +
Preference number: 6 (lower is better)
Translates to: QQKRGMGAGSLL*PMLSVLPLRSF
Trigger: AAAGGACCGGAGAGGCAGAACCGAGAGCATCGGCAACAGAAGAGACCCAGCACCCATGCCTCTTTTCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540314.2
CDS CAA 90 bp AAAGCTCCTTGCCAAAACTTTAGCTTGGCCTGGATCTCGCGAGCTTaGCGACGAGCCAGCACCTGGATGTGGCTGGAGACCATACATCTT +
Preference number: 6 (lower is better)
Translates to: KAPCQNFSLAWISRA*RRASTWMWLETIHL
Trigger: AAGATGTATGGTCTCCAGCCACATCCAGGTGCTGGCTCGTCGCAAAGCTCGCGAGATCCAGGCCAAGCTAAAGTTTTGGCAAGGAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443986.3