RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TEAD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000007866

Ensembl transcript IDs: ENST00000338863.13, ENST00000402886.9, ENST00000639578.3

Found 334 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAATACTCCAGGAGCCGCAGCCGGGAGGAGGCAATGGTACGGTCCTaGCACACAGGCACAGAGGCAGCAGCTGAGGGGAGCGGGGCCAGG +
Preference number: 1 (lower is better)
Translates to: EYSRSRSREEAMVRS*HTGTEAAAEGSGAR
Trigger: CCTGGCCCCGCTCCCCTCAGCTGCTGCCTCTGTGCCTGTGTGGCAGGACCGTACCATTGCCTCCTCCCGGCTGCGGCTCCTGGAGTATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR CCA 90 bp CTCGCTGTGCGGAGTCTGAGGACCACACAAGCCATGCAAGGAGTCTaGGCACCAGGCCTGGGACACAAAGGGGCAAGGAAGTGTGGGCCC +
Preference number: 1 (lower is better)
Translates to: LAVRSLRTTQAMQGV*APGLGHKGARKCGP
Trigger: GGGCCCACACTTCCTTGCCCCTTTGTGTCCCAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAGACTCCGCACAGCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR GCA 90 bp GCCTCCAGGGGTGGGTCTGAGAAGGCGGGGTTCGTCTGGCCGATGTaGACAAACAGGTGTTTGCTGTACGTGTCAGGGTCTCGCTGCACC +
Preference number: 1 (lower is better)
Translates to: ASRGGSEKAGFVWPM*TNRCLLYVSGSRCT
Trigger: GGTGCAGCGAGACCCTGACACGTACAGCAAACACCTGTTTGTGCACATCGGCCAGACGAACCCCGCCTTCTCAGACCCACCCCTGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR CCA 90 bp CAGCTCTGCCCACCTCTCCTGTGGGTCCCTCAACTTCCTGGAGCCTaGGCACTTCATCTGAAACCCAGAGACCTACGCTCGCTGTGCGGA +
Preference number: 1 (lower is better)
Translates to: QLCPPLLWVPQLPGA*ALHLKPRDLRSLCG
Trigger: TCCGCACAGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGTGCCCAGGCTCCAGGAAGTTGAGGGACCCACAGGAGAGGTGGGCAGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR TCA 90 bp GTGTTTGCTGTACGTGTCAGGGTCTCGCTGCACCTCCATGAAGGCTaGATACTCCAGGAGCCGCAGCCGGGAGGAGGCAATGGTACGGTC +
Preference number: 1 (lower is better)
Translates to: VFAVRVRVSLHLHEG*ILQEPQPGGGNGTV
Trigger: GACCGTACCATTGCCTCCTCCCGGCTGCGGCTCCTGGAGTATTCAGCCTTCATGGAGGTGCAGCGAGACCCTGACACGTACAGCAAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR CCA 90 bp AGAACTCCAGCTCTGCCCACCTCTCCTGTGGGTCCCTCAACTTCCTaGAGCCTGGGCACTTCATCTGAAACCCAGAGACCTACGCTCGCT +
Preference number: 1 (lower is better)
Translates to: RTPALPTSPVGPSTS*SLGTSSETQRPTLA
Trigger: AGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGTGCCCAGGCTCCAGGAAGTTGAGGGACCCACAGGAGAGGTGGGCAGAGCTGGAGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR CCA 90 bp ACATCTACTGCCTCCAGGGGTGGGTCTGAGAAGGCGGGGTTCGTCTaGCCGATGTGCACAAACAGGTGTTTGCTGTACGTGTCAGGGTCT +
Preference number: 1 (lower is better)
Translates to: TSTASRGGSEKAGFV*PMCTNRCLLYVSGS
Trigger: AGACCCTGACACGTACAGCAAACACCTGTTTGTGCACATCGGCCAGACGAACCCCGCCTTCTCAGACCCACCCCTGGAGGCAGTAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR GCA 90 bp CTGGCTGGCTTGTGGGCTAATGAGGTGCTAATGGGGTCTAGTAGCTaGTGTGCTCCCTTCTTCATGCCCAGTCTGAAACAGGTGCTCCCC +
Preference number: 1 (lower is better)
Translates to: LAGLWANEVLMGSSS*CAPFFMPSLKQVLP
Trigger: GGGGAGCACCTGTTTCAGACTGGGCATGAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGCCCACAAGCCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR TCA 90 bp AGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGCTGGGCAGAGCAGGGTaGTGGTGGGTCAGCGCCCCG +
Preference number: 2 (lower is better)
Translates to: RCSPNPAPLDEAPLHTAELGRAG*WWVSAP
Trigger: CGGGGCGCTGACCCACCATCACCCTGCTCTGCCCAG...CTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR TCA 90 bp GCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGCCTCTCCCCTACCCTGCGCTATCCCCACCTCTCTaGGGTCACGCGAGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: APLDEAPLHTAEPLPYPALSPPL*GHARLG
Trigger: GCCCAGCCTCGCGTGACCTCAGAGAGGTGGGGATAG...CGCAGGGTAGGGGAGAGGCTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR CCA 90 bp GCCCTCACCTGCCCATCATGCTCCCCCAAGGGTGGGTGGGGGTACAGTGGCCACGTGTGCTGGGGTAGGTaGGGAGGCCTCCTGGGTCCT +
Preference number: 2 (lower is better)
Translates to: ALTCPSCSPKGGWGYSGHVCWGR*GGLLGP
Trigger: AGGACCCAGGAGGCCTCCCCACCTACCCCAGCACAC...GTGGCCACTGTACCCCCACCCACCCTTGGGGGAGCATGATGGGCAGGTGAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR CCA 90 bp GCCCTCACCTGCCCATCATGCTCCCCCAAGGGTGGGTGGGGGTACAGTGGCCACCTCCCTCTGGGCCTCTaGTCTGCCCAGAGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: ALTCPSCSPKGGWGYSGHLPLGL*SAQRLG
Trigger: TCCCAGCCTCTGGGCAGACCAGAGGCCCAGAGGGAG...GTGGCCACTGTACCCCCACCCACCCTTGGGGGAGCATGATGGGCAGGTGAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR TCA 90 bp ACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGCCTCTCCCCTACCCTATCCCCACCTCTCTaGGGTCACGCGAGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: TQRPSMRLHSTLQSLSPTLSPPL*GHARLG
Trigger: GCCCAGCCTCGCGTGACCTCAGAGAGGTGGGGATAG...GGTAGGGGAGAGGCTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR CCA 90 bp GCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGCCTCTCCCCTACCCTGCGGAGGTCACGCGAGGCTaGGCAGAGCAGGGTGATGGT +
Preference number: 2 (lower is better)
Translates to: APLDEAPLHTAEPLPYPAEVTRG*AEQGDG
Trigger: ACCATCACCCTGCTCTGCCCAGCCTCGCGTGACCTC...CGCAGGGTAGGGGAGAGGCTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR CCA 90 bp CACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCACCTCTCTGAGGTCACGCGAGGTGGGGAGGCCTCCTaGGTCCTGGGCCTGAGGCCT +
Preference number: 2 (lower is better)
Translates to: HMLEAEGVPYPHLSEVTRGGEAS*VLGLRP
Trigger: AGGCCTCAGGCCCAGGACCCAGGAGGCCTCCCCACC...TCGCGTGACCTCAGAGAGGTGGGGATAGGGGACACCTTCAGCCTCCAGCATGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR TCA 90 bp GCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGCCTCTCCCCTACCCTGCGAGCTGTACTGAGAGCTaGCCCCATAGAAGGCTCCCG +
Preference number: 2 (lower is better)
Translates to: APLDEAPLHTAEPLPYPASCTES*PHRRLP
Trigger: CGGGAGCCTTCTATGGGGTCAGCTCTCAGTACAGCT...CGCAGGGTAGGGGAGAGGCTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR-3UTR GCA 90 bp GTGCGGAGTCTGAGGACCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGTGGTGCTGGGCCCCGTaGTCACTGGTGGAGACTTCG +
Preference number: 2 (lower is better)
Translates to: VRSLRTTQAMQGVWAPGLWCWAP*SLVETS
Trigger: CGAAGTCTCCACCAGTGAGCACGGGGCCCAGCACCA...CAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAGACTCCGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR-3UTR CCA 90 bp GCGCCCGTTCTCCAGCCTGGCATACTCAGTCTCCACCTTCTCTACCACCTGTTTGGTGGGGAGGCCTCCTaGGTCCTGGGCCTGAGGCCT +
Preference number: 2 (lower is better)
Translates to: APVLQPGILSLHLLYHLFGGEAS*VLGLRP
Trigger: AGGCCTCAGGCCCAGGACCCAGGAGGCCTCCCCACC...AAACAGGTGGTAGAGAAGGTGGAGACTGAGTATGCCAGGCTGGAGAACGGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR-3UTR CCA 90 bp CCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGGGACACAAAGGGGCAAGCTCCCGGGCCCTCCTaGATGGTGCTGTTGAGGTCG +
Preference number: 2 (lower is better)
Translates to: PHKPCKESGHQAWDTKGQAPGPS*MVLLRS
Trigger: CGACCTCAACAGCACCATCCAGGAGGGCCCGGGAGC...TTGCCCCTTTGTGTCCCAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR-3UTR TCA 90 bp ACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGCCTCTCCCCTACCCCTTGGTGGAGACGCTaGTGGTCATGCTATCAGCAG +
Preference number: 2 (lower is better)
Translates to: TQRPSMRLHSTLQSLSPTPWWRR*WSCYQQ
Trigger: CTGCTGATAGCATGACCATCAGCGTCTCCACCAAGG...GGTAGGGGAGAGGCTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR-3UTR GCA 90 bp CTTCATGCCCAGTCTGAAACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCACCTGCCCATCATaGTCCCCCAAGGGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: LHAQSETGAPLTQRPSMRLTCPS*SPKGGW
Trigger: CCACCCACCCTTGGGGGAGCATGATGGGCAGGTGAG...CCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTTTCAGACTGGGCATGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR GCA 90 bp GCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGCCTCTCCCCTACCCTGCGAACCTAAGGGAGCAGTaGCCACCAAGGGTTTGTCAG +
Preference number: 2 (lower is better)
Translates to: APLDEAPLHTAEPLPYPANLREQ*PPRVCQ
Trigger: CTGACAAACCCTTGGTGGGCACTGCTCCCTTAGGTT...CGCAGGGTAGGGGAGAGGCTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR CCA 90 bp GTGCGGAGTCTGAGGACCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGTCTGGGCACCAGGCCTaGGACACAAAGGGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: VRSLRTTQAMQGVWAPGLSGHQA*DTKGQG
Trigger: TCCTTGCCCCTTTGTGTCCCAGGCCTGGTGCCCAGA...CAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAGACTCCGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR CCA 90 bp AGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGGCCCGTTCTCCAGCCTaGCATACTCAGTCTCCACCT +
Preference number: 2 (lower is better)
Translates to: RCSPNPAPLDEAPLHTAEARSPA*HTQSPP
Trigger: AGGTGGAGACTGAGTATGCCAGGCTGGAGAACGGGC...CTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR-3UTR TCA 90 bp GCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTTCTTCATGCCCCTGGGCAGAGCAGGGTaGTGGTGGGTCAGCGCCCCG +
Preference number: 2 (lower is better)
Translates to: ANEVLMGSSSCCAPFFMPLGRAG*WWVSAP
Trigger: CGGGGCGCTGACCCACCATCACCCTGCTCTGCCCAG...GGGCATGAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR TCA 90 bp GCGCCCGTTCTCCAGCCTGGCATACTCAGTCTCCACCTTCTCTACCACCTGTTTCTCCAGGGGTGGGTCTaGGAAGGCGGGGTTCGTCTG +
Preference number: 2 (lower is better)
Translates to: APVLQPGILSLHLLYHLFLQGWV*EGGVRL
Trigger: CAGACGAACCCCGCCTTCTCAGACCCACCCCTGGAG...AAACAGGTGGTAGAGAAGGTGGAGACTGAGTATGCCAGGCTGGAGAACGGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR-3UTR GCA 90 bp GTGCGGAGTCTGAGGACCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGGCAATGGTACGGTCCTaGCACACAGGCACAGAGGCA +
Preference number: 2 (lower is better)
Translates to: VRSLRTTQAMQGVWAPGLAMVRS*HTGTEA
Trigger: TGCCTCTGTGCCTGTGTGGCAGGACCGTACCATTGC...CAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAGACTCCGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR-3UTR CCA 90 bp CTGAGGACCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGGGACACAAATCCCCCAAGGGTGGGTaGGGGTACAGTGGCCACACA +
Preference number: 2 (lower is better)
Translates to: LRTTQAMQGVWAPGLGHKSPKGG*GYSGHT
Trigger: TGTGTGGCCACTGTACCCCCACCCACCCTTGGGGGA...TTTGTGTCCCAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR CCA 90 bp CACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCACCTCTCTGAGGTCACGCGACAATCTGGAGGGTGCTaGGGGGTGCCCCATCTTCCT +
Preference number: 2 (lower is better)
Translates to: HMLEAEGVPYPHLSEVTRQSGGC*GVPHLP
Trigger: AGGAAGATGGGGCACCCCCCAGCACCCTCCAGATTG...TCGCGTGACCTCAGAGAGGTGGGGATAGGGGACACCTTCAGCCTCCAGCATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR TCA 90 bp CCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGGGACACAAAGGGGCAAACACATGCTGGAGGCTaGAGGTGTCCCCTATCCCCA +
Preference number: 2 (lower is better)
Translates to: PHKPCKESGHQAWDTKGQTHAGG*RCPLSP
Trigger: TGGGGATAGGGGACACCTTCAGCCTCCAGCATGTGT...TTGCCCCTTTGTGTCCCAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR TCA 90 bp CACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCACCTCTCTGAGGTCACGCGAACAAGCAGCCCTGGATaGGAACTCCAGCTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: HMLEAEGVPYPHLSEVTRTSSPG*ELQLCP
Trigger: TGGGCAGAGCTGGAGTTCTCATCCAGGGCTGCTTGT...TCGCGTGACCTCAGAGAGGTGGGGATAGGGGACACCTTCAGCCTCCAGCATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR TCA 90 bp CCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGGGACACAAAGGGGCAACACCTCCATGAAGGCTaGATACTCCAGGAGCCGCAG +
Preference number: 2 (lower is better)
Translates to: PHKPCKESGHQAWDTKGQHLHEG*ILQEPQ
Trigger: CTGCGGCTCCTGGAGTATTCAGCCTTCATGGAGGTG...TTGCCCCTTTGTGTCCCAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR-3UTR GCA 90 bp GTGCGGAGTCTGAGGACCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGAGGAGATGCTCACCCTaGATCCTTAAGGAGGCGCAG +
Preference number: 2 (lower is better)
Translates to: VRSLRTTQAMQGVWAPGLRRCSP*ILKEAQ
Trigger: CTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCT...CAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAGACTCCGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR GCA 90 bp AACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAAGGAGATGCTCACCCTaGATCCTTAAGGAGGCGCAG +
Preference number: 2 (lower is better)
Translates to: NRCSPNPAPLDEAPLHTARRCSP*ILKEAQ
Trigger: CTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCT...TGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR CCA 90 bp AACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGGTCCCTCAACTTCCTaGAGCCTGGGCACTTCATCT +
Preference number: 2 (lower is better)
Translates to: NRCSPNPAPLDEAPLHTAGPSTS*SLGTSS
Trigger: AGATGAAGTGCCCAGGCTCCAGGAAGTTGAGGGACC...TGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR GCA 90 bp TCAACTTCCTGGAGCCTGGGCACTTCATCTGAAACCCAGAGACCTACGCTCGCTCTCACCTGCCCATCATaGTCCCCCAAGGGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: STSWSLGTSSETQRPTLALTCPS*SPKGGW
Trigger: CCACCCACCCTTGGGGGAGCATGATGGGCAGGTGAG...AGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGTGCCCAGGCTCCAGGAAGTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR GCA 90 bp TCAACTTCCTGGAGCCTGGGCACTTCATCTGAAACCCAGAGACCTACGCTCGCTATACCCACAGGTGGCTaGTGGACAGGCCCAGCTGGC +
Preference number: 2 (lower is better)
Translates to: STSWSLGTSSETQRPTLAIPTGG*WTGPAG
Trigger: GCCAGCTGGGCCTGTCCAGCAGCCACCTGTGGGTAT...AGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGTGCCCAGGCTCCAGGAAGTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR GCA 90 bp CCACACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCACCTCTCTGAGGTCACGGTGTCAGGGTCTCGCTaGACCTCCATGAAGGCTGAA +
Preference number: 2 (lower is better)
Translates to: PHMLEAEGVPYPHLSEVTVSGSR*TSMKAE
Trigger: TTCAGCCTTCATGGAGGTGCAGCGAGACCCTGACAC...CGTGACCTCAGAGAGGTGGGGATAGGGGACACCTTCAGCCTCCAGCATGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR-3UTR CCA 90 bp GCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTTCTTCATGCCCGTGTGCTGGGGTAGGTaGGGAGGCCTCCTGGGTCCT +
Preference number: 2 (lower is better)
Translates to: ANEVLMGSSSCCAPFFMPVCWGR*GGLLGP
Trigger: AGGACCCAGGAGGCCTCCCCACCTACCCCAGCACAC...GGGCATGAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR CCA 90 bp CTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTCAAGCCTCAGGCAAGAGACTCCCTCTGGGCCTCTaGTCTGCCCAGAGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: LREQCPPRVCQIQASGKRLPLGL*SAQRLG
Trigger: TCCCAGCCTCTGGGCAGACCAGAGGCCCAGAGGGAG...TCTCTTGCCTGAGGCTTGAATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR TCA 90 bp ACTTCATCTGAAACCCAGAGACCTACGCTCGCTGTGCGGAGTCTGAGGACCACAAGGGCCTCTGCTCACTaGCTCCCTTGGTCTCCATCC +
Preference number: 2 (lower is better)
Translates to: TSSETQRPTLAVRSLRTTRASAH*LPWSPS
Trigger: GGATGGAGACCAAGGGAGTCAGTGAGCAGAGGCCCT...TGTGGTCCTCAGACTCCGCACAGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR GCA 90 bp CCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGGGACACAAAGGGGCAAGGTGTGGAGAGGAGATaGTCACCCTGCATCCTTAAG +
Preference number: 2 (lower is better)
Translates to: PHKPCKESGHQAWDTKGQGVERR*SPCILK
Trigger: CTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACC...TTGCCCCTTTGTGTCCCAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR GCA 90 bp GCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTTCTTCATGCCCGGCTCCACTCCACACTaGAGAGCCTCTCCCCTACCC +
Preference number: 2 (lower is better)
Translates to: ANEVLMGSSSCCAPFFMPGSTPH*RASPLP
Trigger: GGGTAGGGGAGAGGCTCTGCAGTGTGGAGTGGAGCC...GGGCATGAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR CCA 90 bp TCAACTTCCTGGAGCCTGGGCACTTCATCTGAAACCCAGAGACCTACGCTCGCTTGGGTGGGGGTACAGTaGCCACACATGCTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: STSWSLGTSSETQRPTLAWVGVQ*PHMLEA
Trigger: AGCCTCCAGCATGTGTGGCCACTGTACCCCCACCCA...AGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGTGCCCAGGCTCCAGGAAGTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR CCA 90 bp ACTTCATCTGAAACCCAGAGACCTACGCTCGCTGTGCGGAGTCTGAGGACCACATCTGGGCACCAGGCCTaGGACACAAAGGGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: TSSETQRPTLAVRSLRTTSGHQA*DTKGQG
Trigger: TCCTTGCCCCTTTGTGTCCCAGGCCTGGTGCCCAGA...TGTGGTCCTCAGACTCCGCACAGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR CCA 90 bp CTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTCAAGCCTCAGGCAAGAGAGCCGGGAGGAGGCAATaGTACGGTCCTGCCACACAG +
Preference number: 2 (lower is better)
Translates to: LREQCPPRVCQIQASGKRAGRRQ*YGPATQ
Trigger: CTGTGTGGCAGGACCGTACCATTGCCTCCTCCCGGC...TCTCTTGCCTGAGGCTTGAATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR-3UTR TCA 90 bp TCAACTTCCTGGAGCCTGGGCACTTCATCTGAAACCCAGAGACCTACGCTCGCTACACATGCTGGAGGCTaGAGGTGTCCCCTATCCCCA +
Preference number: 2 (lower is better)
Translates to: STSWSLGTSSETQRPTLATHAGG*RCPLSP
Trigger: TGGGGATAGGGGACACCTTCAGCCTCCAGCATGTGT...AGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGTGCCCAGGCTCCAGGAAGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR TCA 90 bp GCGCCCGTTCTCCAGCCTGGCATACTCAGTCTCCACCTTCTCTACCACCTGTTTCTCGCTGCACCTCCATaGAGGCTGAATACTCCAGGA +
Preference number: 2 (lower is better)
Translates to: APVLQPGILSLHLLYHLFLAAPP*RLNTPG
Trigger: TCCTGGAGTATTCAGCCTTCATGGAGGTGCAGCGAG...AAACAGGTGGTAGAGAAGGTGGAGACTGAGTATGCCAGGCTGGAGAACGGGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR-3UTR GCA 90 bp GCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTTCTTCATGCCCCATCCTGCCCTCACCTaGCCATCATGCTCCCCCAAG +
Preference number: 2 (lower is better)
Translates to: ANEVLMGSSSCCAPFFMPHPALT*PSCSPK
Trigger: CTTGGGGGAGCATGATGGGCAGGTGAGGGCAGGATG...GGGCATGAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR GCA 90 bp CCACACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCACCTCTCTGAGGTCACGGCACAAACAGGTGTTTaGTGTACGTGTCAGGGTCTC +
Preference number: 2 (lower is better)
Translates to: PHMLEAEGVPYPHLSEVTAQTGV*CTCQGL
Trigger: GAGACCCTGACACGTACAGCAAACACCTGTTTGTGC...CGTGACCTCAGAGAGGTGGGGATAGGGGACACCTTCAGCCTCCAGCATGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR-3UTR GCA 90 bp CCACACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCACCTCTCTGAGGTCACGTTCGTCTGGCCGATGTaGACAAACAGGTGTTTGCTG +
Preference number: 2 (lower is better)
Translates to: PHMLEAEGVPYPHLSEVTFVWPM*TNRCLL
Trigger: CAGCAAACACCTGTTTGTGCACATCGGCCAGACGAA...CGTGACCTCAGAGAGGTGGGGATAGGGGACACCTTCAGCCTCCAGCATGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR-3UTR GCA 90 bp TCAACTTCCTGGAGCCTGGGCACTTCATCTGAAACCCAGAGACCTACGCTCGCTCGGCTCGTGACCACCTaGAGGATGGTGAAGTTCTCC +
Preference number: 2 (lower is better)
Translates to: STSWSLGTSSETQRPTLARLVTT*RMVKFS
Trigger: GGAGAACTTCACCATCCTGCAGGTGGTCACGAGCCG...AGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGTGCCCAGGCTCCAGGAAGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR-3UTR CCA 90 bp TCAACTTCCTGGAGCCTGGGCACTTCATCTGAAACCCAGAGACCTACGCTCGCTAGTGGCCACACATGCTaGAGGCTGAAGGTGTCCCCT +
Preference number: 2 (lower is better)
Translates to: STSWSLGTSSETQRPTLASGHTC*RLKVSP
Trigger: AGGGGACACCTTCAGCCTCCAGCATGTGTGGCCACT...AGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGTGCCCAGGCTCCAGGAAGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR CCA 90 bp GCTGGCTTGTGGGCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCGGTCCCTCAACTTCCTaGAGCCTGGGCACTTCATCT +
Preference number: 2 (lower is better)
Translates to: AGLWANEVLMGSSSCCAPGPSTS*SLGTSS
Trigger: AGATGAAGTGCCCAGGCTCCAGGAAGTTGAGGGACC...GGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGCCCACAAGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR CCA 90 bp TCAACTTCCTGGAGCCTGGGCACTTCATCTGAAACCCAGAGACCTACGCTCGCTCACATGGGCGAGCGGTaGATACGGTACACAAAGCGC +
Preference number: 2 (lower is better)
Translates to: STSWSLGTSSETQRPTLAHMGER*IRYTKR
Trigger: GCGCTTTGTGTACCGTATCCACCGCTCGCCCATGTG...AGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGTGCCCAGGCTCCAGGAAGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR-3UTR TCA 90 bp GCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTTCTTCATGCCCGGCCTGGCAGGTAGATaGATCCTCAATCCTGGACCC +
Preference number: 2 (lower is better)
Translates to: ANEVLMGSSSCCAPFFMPGLAGR*ILNPGP
Trigger: GGGTCCAGGATTGAGGATTCATCTACCTGCCAGGCC...GGGCATGAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR GCA 90 bp TCAACTTCCTGGAGCCTGGGCACTTCATCTGAAACCCAGAGACCTACGCTCGCTTACAGTGGCCACACATaGTGGAGGCTGAAGGTGTCC +
Preference number: 2 (lower is better)
Translates to: STSWSLGTSSETQRPTLAYSGHT*WRLKVS
Trigger: GGACACCTTCAGCCTCCAGCATGTGTGGCCACTGTA...AGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGTGCCCAGGCTCCAGGAAGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR GCA 90 bp TTGTGGGCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTTCTTCCATCCTGCCCTCACCTaGCCATCATGCTCCCCCAAG +
Preference number: 2 (lower is better)
Translates to: LWANEVLMGSSSCCAPFFHPALT*PSCSPK
Trigger: CTTGGGGGAGCATGATGGGCAGGTGAGGGCAGGATG...GAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGCCCACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR GCA 90 bp CTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTCAAGCCTCAGGCAAGAGAGGACCACACAAGCCATaGAAGGAGTCTGGGCACCAG +
Preference number: 2 (lower is better)
Translates to: LREQCPPRVCQIQASGKRGPHKP*KESGHQ
Trigger: CTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCC...TCTCTTGCCTGAGGCTTGAATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR CCA 90 bp TTGTGGGCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTTCTTCTGGGTGGGGGTACAGTaGCCACACATGCTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: LWANEVLMGSSSCCAPFFWVGVQ*PHMLEA
Trigger: AGCCTCCAGCATGTGTGGCCACTGTACCCCCACCCA...GAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGCCCACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR CCA 90 bp GCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTTCTTCATGCCCGGGGACAAGCAGCCCTaGATGAGAACTCCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: ANEVLMGSSSCCAPFFMPGDKQP*MRTPAL
Trigger: CAGAGCTGGAGTTCTCATCCAGGGCTGCTTGTCCCC...GGGCATGAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR CCA 90 bp TCAACTTCCTGGAGCCTGGGCACTTCATCTGAAACCCAGAGACCTACGCTCGCTCTTCAGTCCCAGAACTaGGTCTGGGAGCTGCTACTC +
Preference number: 2 (lower is better)
Translates to: STSWSLGTSSETQRPTLALQSQN*VWELLL
Trigger: GAGTAGCAGCTCCCAGACCCAGTTCTGGGACTGAAG...AGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGTGCCCAGGCTCCAGGAAGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR CCA 90 bp ATTGAGGTGGGGAAGAACCTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTTGCCCACCTCTCCTGTaGGTCCCTCAACTTCCTGGA +
Preference number: 2 (lower is better)
Translates to: IEVGKNLREQCPPRVCQICPPLL*VPQLPG
Trigger: TCCAGGAAGTTGAGGGACCCACAGGAGAGGTGGGCA...AATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAGGTTCTTCCCCACCTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR CCA 90 bp ATTGAGGTGGGGAAGAACCTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTAAGGCGGGGTTCGTCTaGCCGATGTGCACAAACAGG +
Preference number: 2 (lower is better)
Translates to: IEVGKNLREQCPPRVCQIKAGFV*PMCTNR
Trigger: CCTGTTTGTGCACATCGGCCAGACGAACCCCGCCTT...AATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAGGTTCTTCCCCACCTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR-3UTR CCA 90 bp CTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTCAAGCCTCAGGCAAGAGATCATGTACTCGCACATaGGCGAGCGGTGGATACGGT +
Preference number: 2 (lower is better)
Translates to: LREQCPPRVCQIQASGKRSCTRT*ASGGYG
Trigger: ACCGTATCCACCGCTCGCCCATGTGCGAGTACATGA...TCTCTTGCCTGAGGCTTGAATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR-3UTR CCA 90 bp TTGTGGGCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTTCTTCGGGCCCCGTGCTCACTaGTGGAGACTTCGAAGACAA +
Preference number: 2 (lower is better)
Translates to: LWANEVLMGSSSCCAPFFGPRAH*WRLRRQ
Trigger: TTGTCTTCGAAGTCTCCACCAGTGAGCACGGGGCCC...GAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGCCCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR-3UTR GCA 90 bp CTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTCAAGCCTCAGGCAAGAGAGGTGTGGAGAGGAGATaGTCACCCTGCATCCTTAAG +
Preference number: 2 (lower is better)
Translates to: LREQCPPRVCQIQASGKRGVERR*SPCILK
Trigger: CTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACC...TCTCTTGCCTGAGGCTTGAATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR GCA 90 bp TCAACTTCCTGGAGCCTGGGCACTTCATCTGAAACCCAGAGACCTACGCTCGCTATGGGGTCTAGTAGCTaGTGTGCTCCCTTCTTCATG +
Preference number: 2 (lower is better)
Translates to: STSWSLGTSSETQRPTLAMGSSS*CAPFFM
Trigger: CATGAAGAAGGGAGCACAGCAGCTACTAGACCCCAT...AGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGTGCCCAGGCTCCAGGAAGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR CCA 90 bp GCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTTCTTCATGCCCTATAAACCTGGGCTCTaGGGACAAGCAGCCCTGGAT +
Preference number: 2 (lower is better)
Translates to: ANEVLMGSSSCCAPFFMPYKPGL*GQAALD
Trigger: ATCCAGGGCTGCTTGTCCCCAGAGCCCAGGTTTATA...GGGCATGAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR GCA 90 bp ATTGAGGTGGGGAAGAACCTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTTCTCTACCACCTGTTTaGCAAAGGAGCACACCTTGG +
Preference number: 2 (lower is better)
Translates to: IEVGKNLREQCPPRVCQISLPPV*QRSTPW
Trigger: CCAAGGTGTGCTCCTTTGGCAAACAGGTGGTAGAGA...AATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAGGTTCTTCCCCACCTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR-3UTR CAA 90 bp GTGCGGAGTCTGAGGACCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGTGCTCACTGACTCCCTaGGTCTCCATCCTGCCCTCA +
Preference number: 3 (lower is better)
Translates to: VRSLRTTQAMQGVWAPGLCSLTP*VSILPS
Trigger: TGAGGGCAGGATGGAGACCAAGGGAGTCAGTGAGCA...CAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAGACTCCGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR TCA 72 bp GATCTGGCGCACATCTACTGCCTCCAGGGGTGGGTCTaGGAAGGCGGGGTTCGTCTGGCCGATGTGCACAAA +
Preference number: 3 (lower is better)
Translates to: DLAHIYCLQGWV*EGGVRLADVHK
Trigger: TTTGTGCACATCGGCCAGACGAACCCCGCCTTCTCAGACCCACCCCTGGAGGCAGTAGATGTGCGCCAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR CCA 72 bp CGGAGTCTGAGGACCACACAAGCCATGCAAGGAGTCTaGGCACCAGGCCTGGGACACAAAGGGGCAAGGAAG +
Preference number: 3 (lower is better)
Translates to: RSLRTTQAMQGV*APGLGHKGARK
Trigger: CTTCCTTGCCCCTTTGTGTCCCAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAGACTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR CCA 72 bp GCCTCCAGGGGTGGGTCTGAGAAGGCGGGGTTCGTCTaGCCGATGTGCACAAACAGGTGTTTGCTGTACGTG +
Preference number: 3 (lower is better)
Translates to: ASRGGSEKAGFV*PMCTNRCLLYV
Trigger: CACGTACAGCAAACACCTGTTTGTGCACATCGGCCAGACGAACCCCGCCTTCTCAGACCCACCCCTGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR-3UTR CAA 90 bp ACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGCCTCTCCCCTACCTTCTCTACCACCTGTTaGCCAAAGGAGCACACCTTG +
Preference number: 3 (lower is better)
Translates to: TQRPSMRLHSTLQSLSPTFSTTC*PKEHTL
Trigger: CAAGGTGTGCTCCTTTGGCAAACAGGTGGTAGAGAA...GGTAGGGGAGAGGCTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR TCA 72 bp CTGAAACCCAGAGACCTACGCTCGCTGTGCGGAGTCTaGGGACCACACAAGCCATGCAAGGAGTCTGGGCAC +
Preference number: 3 (lower is better)
Translates to: LKPRDLRSLCGV*GPHKPCKESGH
Trigger: GTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAGACTCCGCACAGCGAGCGTAGGTCTCTGGGTTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR TCA 72 bp GCATCCTTAAGGAGGCGCAGAGGGCACCCTAGTCTTTaGCGAGCTTGTAGACATGGTGCTGGGCCCCGTGCT +
Preference number: 3 (lower is better)
Translates to: ASLRRRRGHPSL*RACRHGAGPRA
Trigger: AGCACGGGGCCCAGCACCATGTCTACAAGCTCGTCAAAGACTAGGGTGCCCTCTGCGCCTCCTTAAGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR-3UTR CAA 90 bp CTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTCAAGCCTCAGGCAAGAGAGGGCCCCTGGCTGGCTaGTGGGCTAATGAGGTGCTA +
Preference number: 3 (lower is better)
Translates to: LREQCPPRVCQIQASGKRGPLAG*WANEVL
Trigger: TAGCACCTCATTAGCCCACAAGCCAGCCAGGGGCCC...TCTCTTGCCTGAGGCTTGAATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR-3UTR CAA 90 bp AACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCATGCACAAACAGGTGTTaGCTGTACGTGTCAGGGTCT +
Preference number: 3 (lower is better)
Translates to: NRCSPNPAPLDEAPLHTACTNRC*LYVSGS
Trigger: AGACCCTGACACGTACAGCAAACACCTGTTTGTGCA...TGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR TCA 72 bp GCTCTGGGGGCCTGGGTGTTAAGAAGGGACAGCAGGTaGAGGGTTAACCTTCAGTCCCAGAACTGGGTCTGG +
Preference number: 3 (lower is better)
Translates to: ALGAWVLRRDSR*RVNLQSQNWVW
Trigger: CCAGACCCAGTTCTGGGACTGAAGGTTAACCCTTCACCTGCTGTCCCTTCTTAACACCCAGGCCCCCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
3UTR GCA 72 bp GGTGGGTCTGAGAAGGCGGGGTTCGTCTGGCCGATGTaGACAAACAGGTGTTTGCTGTACGTGTCAGGGTCT +
Preference number: 3 (lower is better)
Translates to: GGSEKAGFVWPM*TNRCLLYVSGS
Trigger: AGACCCTGACACGTACAGCAAACACCTGTTTGTGCACATCGGCCAGACGAACCCCGCCTTCTCAGACCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR GCA 72 bp ACAAACAGGTGTTTGCTGTACGTGTCAGGGTCTCGCTaGACCTCCATGAAGGCTGAATACTCCAGGAGCCGC +
Preference number: 3 (lower is better)
Translates to: TNRCLLYVSGSR*TSMKAEYSRSR
Trigger: GCGGCTCCTGGAGTATTCAGCCTTCATGGAGGTGCAGCGAGACCCTGACACGTACAGCAAACACCTGTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR CCA 72 bp GGTGGATACGGTACACAAAGCGCCCGTTCTCCAGCCTaGCATACTCAGTCTCCACCTTCTCTACCACCTGTT +
Preference number: 3 (lower is better)
Translates to: GGYGTQSARSPA*HTQSPPSLPPV
Trigger: AACAGGTGGTAGAGAAGGTGGAGACTGAGTATGCCAGGCTGGAGAACGGGCGCTTTGTGTACCGTATCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR TCA 72 bp CCTGTTTGCCAAAGGAGCACACCTTGGTGGAGACGCTaGTGGTCATGCTATCAGCAGAGCTGTACTGAGAGC +
Preference number: 3 (lower is better)
Translates to: PVCQRSTPWWRR*WSCYQQSCTES
Trigger: GCTCTCAGTACAGCTCTGCTGATAGCATGACCATCAGCGTCTCCACCAAGGTGTGCTCCTTTGGCAAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402886.9
3UTR GCA 72 bp TTGTGGGCTAATGAGGTGCTAATGGGGTCTAGTAGCTaGTGTGCTCCCTTCTTCATGCCCAGTCTGAAACAG +
Preference number: 3 (lower is better)
Translates to: LWANEVLMGSSS*CAPFFMPSLKQ
Trigger: CTGTTTCAGACTGGGCATGAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGCCCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp GTGCGGAGTCTGAGGACCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGAGCCCACTGGGCGGCTaGGCCTGGTCCGAGCTCGCG +
Preference number: 4 (lower is better)
Translates to: VRSLRTTQAMQGVWAPGLSPLGG*AWSELA
Trigger: CGCGAGCTCGGACCAGGCTCAGCCGCCCAGTGGGCT...CAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAGACTCCGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp GGGTGGGGGTACAGTGGCCACACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCGGGGCTCATAACTGCTaGGCGTCGGCGGCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: GWGYSGHTCWRLKVSPIPGAHNC*ASAAGA
Trigger: CGCCCCTGCCGCCGACGCTCAGCAGTTATGAGCCCC...GGGGATAGGGGACACCTTCAGCCTCCAGCATGTGTGGCCACTGTACCCCCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp GCCCTCACCTGCCCATCATGCTCCCCCAAGGGTGGGTGGGGGTACAGTGGCCACCTCCAGGGGTGGGTCTaGGAAGGCGGGGTTCGTCTG +
Preference number: 4 (lower is better)
Translates to: ALTCPSCSPKGGWGYSGHLQGWV*EGGVRL
Trigger: CAGACGAACCCCGCCTTCTCAGACCCACCCCTGGAG...GTGGCCACTGTACCCCCACCCACCCTTGGGGGAGCATGATGGGCAGGTGAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp ACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGCCTCTCCCCTACCCCTCCCCGGGGCTGCTaGTGGCGTTCCAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: TQRPSMRLHSTLQSLSPTPPRGC*WRSSCW
Trigger: CCAACAGCTGGAACGCCAGCAGCAGCCCCGGGGAGG...GGTAGGGGAGAGGCTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp GCCCTCACCTGCCCATCATGCTCCCCCAAGGGTGGGTGGGGGTACAGTGGCCACGCTCCCGGGCCCTCCTaGATGGTGCTGTTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: ALTCPSCSPKGGWGYSGHAPGPS*MVLLRS
Trigger: CGACCTCAACAGCACCATCCAGGAGGGCCCGGGAGC...GTGGCCACTGTACCCCCACCCACCCTTGGGGGAGCATGATGGGCAGGTGAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACAGCCCACTGGGCGGCTaGGCCTGGTCCGAGCTCGCG +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHSPLGG*AWSELA
Trigger: CGCGAGCTCGGACCAGGCTCAGCCGCCCAGTGGGCT...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR TCA 90 bp AGATCTGGCGCACATCTACTGCCTCCAGGGGTGGGTCTGAGAAGGCGGGGTTCGCTGGGCAGAGCAGGGTaGTGGTGGGTCAGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: RSGAHLLPPGVGLRRRGSLGRAG*WWVSAP
Trigger: CGGGGCGCTGACCCACCATCACCCTGCTCTGCCCAG...CGAACCCCGCCTTCTCAGACCCACCCCTGGAGGCAGTAGATGTGCGCCAGATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402886.9
CDS-3UTR CCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCGGAATGAGCCGGGCTaGAGCGGGAGGCGCCGAGCG +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGRNEPG*SGRRRA
Trigger: CGCTCGGCGCCTCCCGCTCCAGCCCGGCTCATTCCG...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000639578.3
CDS-3UTR CCA 90 bp GCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGCCTCTCCCCTACCCTGCGGCCGGGAGGAGGCAATaGTACGGTCCTGCCACACAG +
Preference number: 4 (lower is better)
Translates to: APLDEAPLHTAEPLPYPAAGRRQ*YGPATQ
Trigger: CTGTGTGGCAGGACCGTACCATTGCCTCCTCCCGGC...CGCAGGGTAGGGGAGAGGCTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp ACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGCCTCTCCCCTACCGCTCCCGGGCCCTCCTaGATGGTGCTGTTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: TQRPSMRLHSTLQSLSPTAPGPS*MVLLRS
Trigger: CGACCTCAACAGCACCATCCAGGAGGGCCCGGGAGC...GGTAGGGGAGAGGCTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp GCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGCCTCTCCCCTACCCTGCGTCCCCCAAGGGTGGGTaGGGGTACAGTGGCCACACA +
Preference number: 4 (lower is better)
Translates to: APLDEAPLHTAEPLPYPASPKGG*GYSGHT
Trigger: TGTGTGGCCACTGTACCCCCACCCACCCTTGGGGGA...CGCAGGGTAGGGGAGAGGCTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp CTGAGGACCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGGGACACAAAAGCCCACTGGGCGGCTaGGCCTGGTCCGAGCTCGCG +
Preference number: 4 (lower is better)
Translates to: LRTTQAMQGVWAPGLGHKSPLGG*AWSELA
Trigger: CGCGAGCTCGGACCAGGCTCAGCCGCCCAGTGGGCT...TTTGTGTCCCAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACGGGGCTCATAACTGCTaGGCGTCGGCGGCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHGAHNC*ASAAGA
Trigger: CGCCCCTGCCGCCGACGCTCAGCAGTTATGAGCCCC...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR TCA 90 bp CCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGGGACACAAAGGGGCAACTGGGCAGAGCAGGGTaGTGGTGGGTCAGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: PHKPCKESGHQAWDTKGQLGRAG*WWVSAP
Trigger: CGGGGCGCTGACCCACCATCACCCTGCTCTGCCCAG...TTGCCCCTTTGTGTCCCAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp AACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCACAGGAGCTGGGCCTTTaGGGGCCCCTGCTCCAACCC +
Preference number: 4 (lower is better)
Translates to: NRCSPNPAPLDEAPLHTAQELGL*GPLLQP
Trigger: GGGTTGGAGCAGGGGCCCTCAAAGGCCCAGCTCCTG...TGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp GCCCTCACCTGCCCATCATGCTCCCCCAAGGGTGGGTGGGGGTACAGTGGCCACTTGTGCTGGTTGCTCTaGGCTCTGGGCCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: ALTCPSCSPKGGWGYSGHLCWLL*ALGLSP
Trigger: TGGGCTCAGGCCCAGAGCCCAGAGCAACCAGCACAA...GTGGCCACTGTACCCCCACCCACCCTTGGGGGAGCATGATGGGCAGGTGAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGGGTGGGGAGGCCTCCTaGGTCCTGGGCCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGGGEAS*VLGLRP
Trigger: AGGCCTCAGGCCCAGGACCCAGGAGGCCTCCCCACC...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR TCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACCCGGAATGTGCGGAATaGGCCGGGCTGGAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHPECAE*AGLERE
Trigger: CTCCCGCTCCAGCCCGGCTCATTCCGCACATTCCGG...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000639578.3
CDS-3UTR TCA 90 bp AACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCACTATCCCCACCTCTCTaGGGTCACGCGAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: NRCSPNPAPLDEAPLHTALSPPL*GHARLG
Trigger: GCCCAGCCTCGCGTGACCTCAGAGAGGTGGGGATAG...TGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp ACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGCCTCTCCCCTACCAGGGCCTCTGCTCACTaGCTCCCTTGGTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: TQRPSMRLHSTLQSLSPTRASAH*LPWSPS
Trigger: GGATGGAGACCAAGGGAGTCAGTGAGCAGAGGCCCT...GGTAGGGGAGAGGCTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp AACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGGGCTGGCCGGAATGTaGGGAATGAGCCGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: NRCSPNPAPLDEAPLHTAGLAGM*GMSRAG
Trigger: TCCAGCCCGGCTCATTCCGCACATTCCGGCCAGCCC...TGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338863.13
CDS-3UTR GCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACCCTCCCCGGGGCTGCTaGTGGCGTTCCAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHPPRGC*WRSSCW
Trigger: CCAACAGCTGGAACGCCAGCAGCAGCCCCGGGGAGG...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR GCA 90 bp AGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGTGGTGCTGGGCCCCGTaGTCACTGGTGGAGACTTCG +
Preference number: 4 (lower is better)
Translates to: RCSPNPAPLDEAPLHTAEWCWAP*SLVETS
Trigger: CGAAGTCTCCACCAGTGAGCACGGGGCCCAGCACCA...CTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp GCCCTCACCTGCCCATCATGCTCCCCCAAGGGTGGGTGGGGGTACAGTGGCCACGGACCACACAAGCCATaGAAGGAGTCTGGGCACCAG +
Preference number: 4 (lower is better)
Translates to: ALTCPSCSPKGGWGYSGHGPHKP*KESGHQ
Trigger: CTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCC...GTGGCCACTGTACCCCCACCCACCCTTGGGGGAGCATGATGGGCAGGTGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp GGGTGGGGGTACAGTGGCCACACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCGGCTCCACTCCACACTaGAGAGCCTCTCCCCTACCC +
Preference number: 4 (lower is better)
Translates to: GWGYSGHTCWRLKVSPIPGSTPH*RASPLP
Trigger: GGGTAGGGGAGAGGCTCTGCAGTGTGGAGTGGAGCC...GGGGATAGGGGACACCTTCAGCCTCCAGCATGTGTGGCCACTGTACCCCCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp CACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCACCTCTCTGAGGTCACGCGACCCCGGGGCTGCTGCTaGCGTTCCAGCTGTTGGACG +
Preference number: 4 (lower is better)
Translates to: HMLEAEGVPYPHLSEVTRPRGCC*RSSCWT
Trigger: CGTCCAACAGCTGGAACGCCAGCAGCAGCCCCGGGG...TCGCGTGACCTCAGAGAGGTGGGGATAGGGGACACCTTCAGCCTCCAGCATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCCCCGGGGCTGCTGCTaGCGTTCCAGCTGTTGGACG +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGPRGCC*RSSCWT
Trigger: CGTCCAACAGCTGGAACGCCAGCAGCAGCCCCGGGG...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CCA 90 bp AACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGCAGGGGCGGCTGGATaGGGTAGGCTGGCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: NRCSPNPAPLDEAPLHTAAGAAG*GRLAVQ
Trigger: TTGCACAGCCAGCCTACCCCATCCAGCCGCCCCTGC...TGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp AGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGGCCGGGAGGAGGCAATaGTACGGTCCTGCCACACAG +
Preference number: 4 (lower is better)
Translates to: RCSPNPAPLDEAPLHTAEAGRRQ*YGPATQ
Trigger: CTGTGTGGCAGGACCGTACCATTGCCTCCTCCCGGC...CTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp ACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGCCTCTCCCCTACCTCTGGGCACCAGGCCTaGGACACAAAGGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: TQRPSMRLHSTLQSLSPTSGHQA*DTKGQG
Trigger: TCCTTGCCCCTTTGTGTCCCAGGCCTGGTGCCCAGA...GGTAGGGGAGAGGCTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp GCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGCCTCTCCCCTACCCTGCGTGCCCACCTCTCCTGTaGGTCCCTCAACTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: APLDEAPLHTAEPLPYPACPPLL*VPQLPG
Trigger: TCCAGGAAGTTGAGGGACCCACAGGAGAGGTGGGCA...CGCAGGGTAGGGGAGAGGCTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCCTCGTCTGACAGGATaGTCTTCCGCCGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGPRLTG*SSAGRR
Trigger: CCTGCGGCCGGCGGAAGATCATCCTGTCAGACGAGG...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR TCA 90 bp CACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCACCTCTCTGAGGTCACGCGACTCCAGGGGTGGGTCTaGGAAGGCGGGGTTCGTCTG +
Preference number: 4 (lower is better)
Translates to: HMLEAEGVPYPHLSEVTRLQGWV*EGGVRL
Trigger: CAGACGAACCCCGCCTTCTCAGACCCACCCCTGGAG...TCGCGTGACCTCAGAGAGGTGGGGATAGGGGACACCTTCAGCCTCCAGCATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCTCCAGGGGTGGGTCTaGGAAGGCGGGGTTCGTCTG +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGLQGWV*EGGVRL
Trigger: CAGACGAACCCCGCCTTCTCAGACCCACCCCTGGAG...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR TCA 90 bp GGGTGGGGGTACAGTGGCCACACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCAGGGCCTCTGCTCACTaGCTCCCTTGGTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: GWGYSGHTCWRLKVSPIPRASAH*LPWSPS
Trigger: GGATGGAGACCAAGGGAGTCAGTGAGCAGAGGCCCT...GGGGATAGGGGACACCTTCAGCCTCCAGCATGTGTGGCCACTGTACCCCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp GCCCTCACCTGCCCATCATGCTCCCCCAAGGGTGGGTGGGGGTACAGTGGCCACCCTGGGCACTTCATCTaGAACCCAGAGACCTACGCT +
Preference number: 4 (lower is better)
Translates to: ALTCPSCSPKGGWGYSGHPGHFI*NPETYA
Trigger: AGCGTAGGTCTCTGGGTTTCAGATGAAGTGCCCAGG...GTGGCCACTGTACCCCCACCCACCCTTGGGGGAGCATGATGGGCAGGTGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGGGGCTGGCCGGAATGTaGGGAATGAGCCGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGGLAGM*GMSRAG
Trigger: TCCAGCCCGGCTCATTCCGCACATTCCGGCCAGCCC...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000639578.3
CDS-3UTR GCA 90 bp AACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCACTCACCTGCCCATCATaGTCCCCCAAGGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: NRCSPNPAPLDEAPLHTALTCPS*SPKGGW
Trigger: CCACCCACCCTTGGGGGAGCATGATGGGCAGGTGAG...TGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp GGGTGGGGGTACAGTGGCCACACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCTTGTGCTGGTTGCTCTaGGCTCTGGGCCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GWGYSGHTCWRLKVSPIPLCWLL*ALGLSP
Trigger: TGGGCTCAGGCCCAGAGCCCAGAGCAACCAGCACAA...GGGGATAGGGGACACCTTCAGCCTCCAGCATGTGTGGCCACTGTACCCCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp AGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGCTGGCAGAGACGATCTaGGCAGAGGACATGGACGCC +
Preference number: 4 (lower is better)
Translates to: RCSPNPAPLDEAPLHTAELAETI*AEDMDA
Trigger: GGCGTCCATGTCCTCTGCCCAGATCGTCTCTGCCAG...CTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp CTTCATGCCCAGTCTGAAACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGGCAGGGGCGGCTGGATaGGGTAGGCTGGCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: LHAQSETGAPLTQRPSMRAGAAG*GRLAVQ
Trigger: TTGCACAGCCAGCCTACCCCATCCAGCCGCCCCTGC...CCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTTTCAGACTGGGCATGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACGCAGGGGCGGCTGGATaGGGTAGGCTGGCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHAGAAG*GRLAVQ
Trigger: TTGCACAGCCAGCCTACCCCATCCAGCCGCCCCTGC...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACGCTCCCGGGCCCTCCTaGATGGTGCTGTTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHAPGPS*MVLLRS
Trigger: CGACCTCAACAGCACCATCCAGGAGGGCCCGGGAGC...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CCA 90 bp GTGCGGAGTCTGAGGACCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGACAAGCAGGGTCTCCTaGGAGTCCCGGCTCGTGACC +
Preference number: 4 (lower is better)
Translates to: VRSLRTTQAMQGVWAPGLTSRVS*ESRLVT
Trigger: GGTCACGAGCCGGGACTCCCAGGAGACCCTGCTTGT...CAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAGACTCCGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACGTGTGCTGGGGTAGGTaGGGAGGCCTCCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHVCWGR*GGLLGP
Trigger: AGGACCCAGGAGGCCTCCCCACCTACCCCAGCACAC...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CCA 90 bp GGGTGGGGGTACAGTGGCCACACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCTGGGTGGGGGTACAGTaGCCACACATGCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GWGYSGHTCWRLKVSPIPWVGVQ*PHMLEA
Trigger: AGCCTCCAGCATGTGTGGCCACTGTACCCCCACCCA...GGGGATAGGGGACACCTTCAGCCTCCAGCATGTGTGGCCACTGTACCCCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp GGGTGGGGGTACAGTGGCCACACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCCAATCTGGAGGGTGCTaGGGGGTGCCCCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: GWGYSGHTCWRLKVSPIPQSGGC*GVPHLP
Trigger: AGGAAGATGGGGCACCCCCCAGCACCCTCCAGATTG...GGGGATAGGGGACACCTTCAGCCTCCAGCATGTGTGGCCACTGTACCCCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp CTTCATGCCCAGTCTGAAACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCCTCTGGGCCTCTaGTCTGCCCAGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LHAQSETGAPLTQRPSMRLPLGL*SAQRLG
Trigger: TCCCAGCCTCTGGGCAGACCAGAGGCCCAGAGGGAG...CCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTTTCAGACTGGGCATGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp GGGTGGGGGTACAGTGGCCACACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCAGCTGTACTGAGAGCTaGCCCCATAGAAGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: GWGYSGHTCWRLKVSPIPSCTES*PHRRLP
Trigger: CGGGAGCCTTCTATGGGGTCAGCTCTCAGTACAGCT...GGGGATAGGGGACACCTTCAGCCTCCAGCATGTGTGGCCACTGTACCCCCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp CTGAGGACCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGGGACACAAACTATCCCCACCTCTCTaGGGTCACGCGAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LRTTQAMQGVWAPGLGHKLSPPL*GHARLG
Trigger: GCCCAGCCTCGCGTGACCTCAGAGAGGTGGGGATAG...TTTGTGTCCCAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp GCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGCCTCTCCCCTACCCTGCGAGAAGGGACAGCAGGTaGAGGGTTAACCTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: APLDEAPLHTAEPLPYPARRDSR*RVNLQS
Trigger: GGACTGAAGGTTAACCCTTCACCTGCTGTCCCTTCT...CGCAGGGTAGGGGAGAGGCTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGTGGTGCTGGGCCCCGTaGTCACTGGTGGAGACTTCG +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGWCWAP*SLVETS
Trigger: CGAAGTCTCCACCAGTGAGCACGGGGCCCAGCACCA...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR GCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCTCACCTGCCCATCATaGTCCCCCAAGGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGLTCPS*SPKGGW
Trigger: CCACCCACCCTTGGGGGAGCATGATGGGCAGGTGAG...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp GCCCTCACCTGCCCATCATGCTCCCCCAAGGGTGGGTGGGGGTACAGTGGCCACAACCTAAGGGAGCAGTaGCCACCAAGGGTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: ALTCPSCSPKGGWGYSGHNLREQ*PPRVCQ
Trigger: CTGACAAACCCTTGGTGGGCACTGCTCCCTTAGGTT...GTGGCCACTGTACCCCCACCCACCCTTGGGGGAGCATGATGGGCAGGTGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp CCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGGGACACAAAGGGGCAAATACCCACAGGTGGCTaGTGGACAGGCCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: PHKPCKESGHQAWDTKGQIPTGG*WTGPAG
Trigger: GCCAGCTGGGCCTGTCCAGCAGCCACCTGTGGGTAT...TTGCCCCTTTGTGTCCCAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp ACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGCCTCTCCCCTACCTGTTCTGCAGGACACTaGCAGAGACGATCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: TQRPSMRLHSTLQSLSPTCSAGH*QRRSGQ
Trigger: CTGCCCAGATCGTCTCTGCCAGTGTCCTGCAGAACA...GGTAGGGGAGAGGCTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGGCCGGGAGGAGGCAATaGTACGGTCCTGCCACACAG +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGAGRRQ*YGPATQ
Trigger: CTGTGTGGCAGGACCGTACCATTGCCTCCTCCCGGC...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CCA 90 bp CTTCATGCCCAGTCTGAAACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGACAAGCAGGGTCTCCTaGGAGTCCCGGCTCGTGACC +
Preference number: 4 (lower is better)
Translates to: LHAQSETGAPLTQRPSMRTSRVS*ESRLVT
Trigger: GGTCACGAGCCGGGACTCCCAGGAGACCCTGCTTGT...CCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTTTCAGACTGGGCATGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGACAAGCAGGGTCTCCTaGGAGTCCCGGCTCGTGACC +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGTSRVS*ESRLVT
Trigger: GGTCACGAGCCGGGACTCCCAGGAGACCCTGCTTGT...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CCA 90 bp CACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCACCTCTCTGAGGTCACGCGAGAGGTCACGCGAGGCTaGGCAGAGCAGGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: HMLEAEGVPYPHLSEVTREVTRG*AEQGDG
Trigger: ACCATCACCCTGCTCTGCCCAGCCTCGCGTGACCTC...TCGCGTGACCTCAGAGAGGTGGGGATAGGGGACACCTTCAGCCTCCAGCATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp AGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGAGTGGCCACACATGCTaGAGGCTGAAGGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: RCSPNPAPLDEAPLHTAESGHTC*RLKVSP
Trigger: AGGGGACACCTTCAGCCTCCAGCATGTGTGGCCACT...CTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp CCACACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCACCTCTCTGAGGTCACGTCCCCCAAGGGTGGGTaGGGGTACAGTGGCCACACA +
Preference number: 4 (lower is better)
Translates to: PHMLEAEGVPYPHLSEVTSPKGG*GYSGHT
Trigger: TGTGTGGCCACTGTACCCCCACCCACCCTTGGGGGA...CGTGACCTCAGAGAGGTGGGGATAGGGGACACCTTCAGCCTCCAGCATGTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp CTGAGGACCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGGGACACAAACTCCCTCTGGGCCTCTaGTCTGCCCAGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LRTTQAMQGVWAPGLGHKLPLGL*SAQRLG
Trigger: TCCCAGCCTCTGGGCAGACCAGAGGCCCAGAGGGAG...TTTGTGTCCCAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp ACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGCCTCTCCCCTACCCTTCAGTCCCAGAACTaGGTCTGGGAGCTGCTACTC +
Preference number: 4 (lower is better)
Translates to: TQRPSMRLHSTLQSLSPTLQSQN*VWELLL
Trigger: GAGTAGCAGCTCCCAGACCCAGTTCTGGGACTGAAG...GGTAGGGGAGAGGCTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp AGATCTGGCGCACATCTACTGCCTCCAGGGGTGGGTCTGAGAAGGCGGGGTTCGCTGGCTCTGGGGGCCTaGGTGTTAAGAAGGGACAGC +
Preference number: 4 (lower is better)
Translates to: RSGAHLLPPGVGLRRRGSLALGA*VLRRDS
Trigger: GCTGTCCCTTCTTAACACCCAGGCCCCCAGAGCCAG...CGAACCCCGCCTTCTCAGACCCACCCCTGGAGGCAGTAGATGTGCGCCAGATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000402886.9
CDS-3UTR TCA 90 bp ACTTCATCTGAAACCCAGAGACCTACGCTCGCTGTGCGGAGTCTGAGGACCACACCGGAATGTGCGGAATaGGCCGGGCTGGAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: TSSETQRPTLAVRSLRTTPECAE*AGLERE
Trigger: CTCCCGCTCCAGCCCGGCTCATTCCGCACATTCCGG...TGTGGTCCTCAGACTCCGCACAGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338863.13
CDS-3UTR TCA 90 bp CTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTCAAGCCTCAGGCAAGAGAGGGGCTCATAACTGCTaGGCGTCGGCGGCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: LREQCPPRVCQIQASGKRGAHNC*ASAAGA
Trigger: CGCCCCTGCCGCCGACGCTCAGCAGTTATGAGCCCC...TCTCTTGCCTGAGGCTTGAATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp AACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGGCCTGGCAGGTAGATaGATCCTCAATCCTGGACCC +
Preference number: 4 (lower is better)
Translates to: NRCSPNPAPLDEAPLHTAGLAGR*ILNPGP
Trigger: GGGTCCAGGATTGAGGATTCATCTACCTGCCAGGCC...TGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp GTGCGGAGTCTGAGGACCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGGGGGTAGGCTGGCTGTaGAAAGGGCTTGATGTCCTG +
Preference number: 4 (lower is better)
Translates to: VRSLRTTQAMQGVWAPGLGVGWL*KGLDVL
Trigger: CAGGACATCAAGCCCTTTGCACAGCCAGCCTACCCC...CAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAGACTCCGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp AACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGCAATGGTACGGTCCTaGCACACAGGCACAGAGGCA +
Preference number: 4 (lower is better)
Translates to: NRCSPNPAPLDEAPLHTAAMVRS*HTGTEA
Trigger: TGCCTCTGTGCCTGTGTGGCAGGACCGTACCATTGC...TGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp TTGTGGGCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTTCTTCCGGAATGAGCCGGGCTaGAGCGGGAGGCGCCGAGCG +
Preference number: 4 (lower is better)
Translates to: LWANEVLMGSSSCCAPFFRNEPG*SGRRRA
Trigger: CGCTCGGCGCCTCCCGCTCCAGCCCGGCTCATTCCG...GAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGCCCACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338863.13
CDS-3UTR CCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGTTGTGCTGGTTGCTCTaGGCTCTGGGCCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGLCWLL*ALGLSP
Trigger: TGGGCTCAGGCCCAGAGCCCAGAGCAACCAGCACAA...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CCA 90 bp ACTTCATCTGAAACCCAGAGACCTACGCTCGCTGTGCGGAGTCTGAGGACCACACCCCGGGGCTGCTGCTaGCGTTCCAGCTGTTGGACG +
Preference number: 4 (lower is better)
Translates to: TSSETQRPTLAVRSLRTTPRGCC*RSSCWT
Trigger: CGTCCAACAGCTGGAACGCCAGCAGCAGCCCCGGGG...TGTGGTCCTCAGACTCCGCACAGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACCTGGCAGAGACGATCTaGGCAGAGGACATGGACGCC +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHLAETI*AEDMDA
Trigger: GGCGTCCATGTCCTCTGCCCAGATCGTCTCTGCCAG...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGAGAACCGCGAGGAAGTaGAGAAGACGGCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGRTARK*RRRPGA
Trigger: TGCCCCAGGCCGTCTTCTCCACTTCCTCGCGGTTCT...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CCA 90 bp AACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCACACATGGGCGAGCGGTaGATACGGTACACAAAGCGC +
Preference number: 4 (lower is better)
Translates to: NRCSPNPAPLDEAPLHTAHMGER*IRYTKR
Trigger: GCGCTTTGTGTACCGTATCCACCGCTCGCCCATGTG...TGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp CACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCACCTCTCTGAGGTCACGCGATCTGGGCACCAGGCCTaGGACACAAAGGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: HMLEAEGVPYPHLSEVTRSGHQA*DTKGQG
Trigger: TCCTTGCCCCTTTGTGTCCCAGGCCTGGTGCCCAGA...TCGCGTGACCTCAGAGAGGTGGGGATAGGGGACACCTTCAGCCTCCAGCATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp GGGTGGGGGTACAGTGGCCACACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCCTTCAGTCCCAGAACTaGGTCTGGGAGCTGCTACTC +
Preference number: 4 (lower is better)
Translates to: GWGYSGHTCWRLKVSPIPLQSQN*VWELLL
Trigger: GAGTAGCAGCTCCCAGACCCAGTTCTGGGACTGAAG...GGGGATAGGGGACACCTTCAGCCTCCAGCATGTGTGGCCACTGTACCCCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCTGGCTCTGGGGGCCTaGGTGTTAAGAAGGGACAGC +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGLALGA*VLRRDS
Trigger: GCTGTCCCTTCTTAACACCCAGGCCCCCAGAGCCAG...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp ACTTCATCTGAAACCCAGAGACCTACGCTCGCTGTGCGGAGTCTGAGGACCACACCTCGTCTGACAGGATaGTCTTCCGCCGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: TSSETQRPTLAVRSLRTTPRLTG*SSAGRR
Trigger: CCTGCGGCCGGCGGAAGATCATCCTGTCAGACGAGG...TGTGGTCCTCAGACTCCGCACAGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp ACTTCGAAGACAAAAGCAATGACAAGCAGGGTCTCCTGGGAGTCCCGGCTCGTGCCTCGTCTGACAGGATaGTCTTCCGCCGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: TSKTKAMTSRVSWESRLVPRLTG*SSAGRR
Trigger: CCTGCGGCCGGCGGAAGATCATCCTGTCAGACGAGG...CACGAGCCGGGACTCCCAGGAGACCCTGCTTGTCATTGCTTTTGTCTTCGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402886.9
CDS-3UTR TCA 90 bp CTTCATGCCCAGTCTGAAACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGGAGGGGAAGGTGGGCTaGACTTGTTCTGCAGGACAC +
Preference number: 4 (lower is better)
Translates to: LHAQSETGAPLTQRPSMREGKVG*TCSAGH
Trigger: GTGTCCTGCAGAACAAGTTCAGCCCACCTTCCCCTC...CCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTTTCAGACTGGGCATGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACGAGGGGAAGGTGGGCTaGACTTGTTCTGCAGGACAC +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHEGKVG*TCSAGH
Trigger: GTGTCCTGCAGAACAAGTTCAGCCCACCTTCCCCTC...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR TCA 90 bp CCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGGGACACAAAGGGGCAAAAGGGCTTGATGTCCTaGGAGGGTCCAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PHKPCKESGHQAWDTKGQKGLMS*EGPGCC
Trigger: ACAGCAGCCTGGACCCTCTCAGGACATCAAGCCCTT...TTGCCCCTTTGTGTCCCAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGAAGGGCTTGATGTCCTaGGAGGGTCCAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGKGLMS*EGPGCC
Trigger: ACAGCAGCCTGGACCCTCTCAGGACATCAAGCCCTT...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR TCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACCACCTCCATGAAGGCTaGATACTCCAGGAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHHLHEG*ILQEPQ
Trigger: CTGCGGCTCCTGGAGTATTCAGCCTTCATGGAGGTG...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR TCA 90 bp GTGCGGAGTCTGAGGACCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGCTCGCTGCACCTCCATaGAGGCTGAATACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VRSLRTTQAMQGVWAPGLLAAPP*RLNTPG
Trigger: TCCTGGAGTATTCAGCCTTCATGGAGGTGCAGCGAG...CAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAGACTCCGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGAGCTGTACTGAGAGCTaGCCCCATAGAAGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGSCTES*PHRRLP
Trigger: CGGGAGCCTTCTATGGGGTCAGCTCTCAGTACAGCT...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR TCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGGGCCTGGCAGGTAGATaGATCCTCAATCCTGGACCC +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGGLAGR*ILNPGP
Trigger: GGGTCCAGGATTGAGGATTCATCTACCTGCCAGGCC...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR TCA 90 bp CACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCACCTCTCTGAGGTCACGCGAACACATGCTGGAGGCTaGAGGTGTCCCCTATCCCCA +
Preference number: 4 (lower is better)
Translates to: HMLEAEGVPYPHLSEVTRTHAGG*RCPLSP
Trigger: TGGGGATAGGGGACACCTTCAGCCTCCAGCATGTGT...TCGCGTGACCTCAGAGAGGTGGGGATAGGGGACACCTTCAGCCTCCAGCATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGACAAGCAGCCCTGGATaGGAACTCCAGCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGTSSPG*ELQLCP
Trigger: TGGGCAGAGCTGGAGTTCTCATCCAGGGCTGCTTGT...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp CCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGGGACACAAAGGGGCAAGGGGTAGGCTGGCTGTaGAAAGGGCTTGATGTCCTG +
Preference number: 4 (lower is better)
Translates to: PHKPCKESGHQAWDTKGQGVGWL*KGLDVL
Trigger: CAGGACATCAAGCCCTTTGCACAGCCAGCCTACCCC...TTGCCCCTTTGTGTCCCAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACGGGGTAGGCTGGCTGTaGAAAGGGCTTGATGTCCTG +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHGVGWL*KGLDVL
Trigger: CAGGACATCAAGCCCTTTGCACAGCCAGCCTACCCC...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR GCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGGCAATGGTACGGTCCTaGCACACAGGCACAGAGGCA +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGAMVRS*HTGTEA
Trigger: TGCCTCTGTGCCTGTGTGGCAGGACCGTACCATTGC...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR GCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCGGCTCGTGACCACCTaGAGGATGGTGAAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGRLVTT*RMVKFS
Trigger: GGAGAACTTCACCATCCTGCAGGTGGTCACGAGCCG...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR GCA 90 bp AGATCTGGCGCACATCTACTGCCTCCAGGGGTGGGTCTGAGAAGGCGGGGTTCGAGGAGATGCTCACCCTaGATCCTTAAGGAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: RSGAHLLPPGVGLRRRGSRRCSP*ILKEAQ
Trigger: CTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCT...CGAACCCCGCCTTCTCAGACCCACCCCTGGAGGCAGTAGATGTGCGCCAGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402886.9
CDS-3UTR GCA 90 bp AACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCATACAGTGGCCACACATaGTGGAGGCTGAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: NRCSPNPAPLDEAPLHTAYSGHT*WRLKVS
Trigger: GGACACCTTCAGCCTCCAGCATGTGTGGCCACTGTA...TGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp CTTCATGCCCAGTCTGAAACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGTGGACGCTATTGTGCTaGTTGCTCTGGGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LHAQSETGAPLTQRPSMRWTLLC*LLWALG
Trigger: GCCCAGAGCCCAGAGCAACCAGCACAATAGCGTCCA...CCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTTTCAGACTGGGCATGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACTGGACGCTATTGTGCTaGTTGCTCTGGGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHWTLLC*LLWALG
Trigger: GCCCAGAGCCCAGAGCAACCAGCACAATAGCGTCCA...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CCA 90 bp CTTCATGCCCAGTCTGAAACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGAAGGCGGGGTTCGTCTaGCCGATGTGCACAAACAGG +
Preference number: 4 (lower is better)
Translates to: LHAQSETGAPLTQRPSMRKAGFV*PMCTNR
Trigger: CCTGTTTGTGCACATCGGCCAGACGAACCCCGCCTT...CCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTTTCAGACTGGGCATGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGAAGGCGGGGTTCGTCTaGCCGATGTGCACAAACAGG +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGKAGFV*PMCTNR
Trigger: CCTGTTTGTGCACATCGGCCAGACGAACCCCGCCTT...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CCA 90 bp CCACACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCACCTCTCTGAGGTCACGGCCCGTTCTCCAGCCTaGCATACTCAGTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: PHMLEAEGVPYPHLSEVTARSPA*HTQSPP
Trigger: AGGTGGAGACTGAGTATGCCAGGCTGGAGAACGGGC...CGTGACCTCAGAGAGGTGGGGATAGGGGACACCTTCAGCCTCCAGCATGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACGCCCGTTCTCCAGCCTaGCATACTCAGTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHARSPA*HTQSPP
Trigger: AGGTGGAGACTGAGTATGCCAGGCTGGAGAACGGGC...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACCACATGGGCGAGCGGTaGATACGGTACACAAAGCGC +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHHMGER*IRYTKR
Trigger: GCGCTTTGTGTACCGTATCCACCGCTCGCCCATGTG...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGGGGCCCCGTGCTCACTaGTGGAGACTTCGAAGACAA +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGGPRAH*WRLRRQ
Trigger: TTGTCTTCGAAGTCTCCACCAGTGAGCACGGGGCCC...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CCA 90 bp CTTCATGCCCAGTCTGAAACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGAGTGGCCACACATGCTaGAGGCTGAAGGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: LHAQSETGAPLTQRPSMRSGHTC*RLKVSP
Trigger: AGGGGACACCTTCAGCCTCCAGCATGTGTGGCCACT...CCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTTTCAGACTGGGCATGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp GTGCGGAGTCTGAGGACCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGGGTCCCTCAACTTCCTaGAGCCTGGGCACTTCATCT +
Preference number: 4 (lower is better)
Translates to: VRSLRTTQAMQGVWAPGLGPSTS*SLGTSS
Trigger: AGATGAAGTGCCCAGGCTCCAGGAAGTTGAGGGACC...CAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAGACTCCGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp GGGTGGGGGTACAGTGGCCACACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCTATAAACCTGGGCTCTaGGGACAAGCAGCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: GWGYSGHTCWRLKVSPIPYKPGL*GQAALD
Trigger: ATCCAGGGCTGCTTGTCCCCAGAGCCCAGGTTTATA...GGGGATAGGGGACACCTTCAGCCTCCAGCATGTGTGGCCACTGTACCCCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp CACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCACCTCTCTGAGGTCACGCGAGGTCTGCCCAGAGGCTaGGACTCCTTCCTCTACCTT +
Preference number: 4 (lower is better)
Translates to: HMLEAEGVPYPHLSEVTRGLPRG*DSFLYL
Trigger: AAGGTAGAGGAAGGAGTCCCAGCCTCTGGGCAGACC...TCGCGTGACCTCAGAGAGGTGGGGATAGGGGACACCTTCAGCCTCCAGCATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp CCACACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCACCTCTCTGAGGTCACGGGTCTGCCCAGAGGCTaGGACTCCTTCCTCTACCTT +
Preference number: 4 (lower is better)
Translates to: PHMLEAEGVPYPHLSEVTGLPRG*DSFLYL
Trigger: AAGGTAGAGGAAGGAGTCCCAGCCTCTGGGCAGACC...CGTGACCTCAGAGAGGTGGGGATAGGGGACACCTTCAGCCTCCAGCATGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGATGGACGCCATGCTCTaGAGGGCTTTGTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGMDAML*RALSLE
Trigger: CTCCAAGGACAAAGCCCTTCAGAGCATGGCGTCCAT...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR TCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCTCGCTGCACCTCCATaGAGGCTGAATACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGLAAPP*RLNTPG
Trigger: TCCTGGAGTATTCAGCCTTCATGGAGGTGCAGCGAG...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR TCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACCCTTGGTGGAGACGCTaGTGGTCATGCTATCAGCAG +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHPWWRR*WSCYQQ
Trigger: CTGCTGATAGCATGACCATCAGCGTCTCCACCAAGG...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR TCA 90 bp CACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCACCTCTCTGAGGTCACGCGACCTTGGTGGAGACGCTaGTGGTCATGCTATCAGCAG +
Preference number: 4 (lower is better)
Translates to: HMLEAEGVPYPHLSEVTRPWWRR*WSCYQQ
Trigger: CTGCTGATAGCATGACCATCAGCGTCTCCACCAAGG...TCGCGTGACCTCAGAGAGGTGGGGATAGGGGACACCTTCAGCCTCCAGCATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp GTGCGGAGTCTGAGGACCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGGGGCACCCTAGTCTTTaGCGAGCTTGTAGACATGGT +
Preference number: 4 (lower is better)
Translates to: VRSLRTTQAMQGVWAPGLGHPSL*RACRHG
Trigger: ACCATGTCTACAAGCTCGTCAAAGACTAGGGTGCCC...CAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAGACTCCGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp AACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAAGAAGGGACAGCAGGTaGAGGGTTAACCTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: NRCSPNPAPLDEAPLHTARRDSR*RVNLQS
Trigger: GGACTGAAGGTTAACCCTTCACCTGCTGTCCCTTCT...TGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACGGGCTGAACTTGTTCTaGAGGACACTGGCAGAGACG +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHGLNLF*RTLAET
Trigger: CGTCTCTGCCAGTGTCCTGCAGAACAAGTTCAGCCC...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR GCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGGTGTCAGGGTCTCGCTaGACCTCCATGAAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGVSGSR*TSMKAE
Trigger: TTCAGCCTTCATGGAGGTGCAGCGAGACCCTGACAC...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR GCA 90 bp ACTTCATCTGAAACCCAGAGACCTACGCTCGCTGTGCGGAGTCTGAGGACCACATGGTGCTGGGCCCCGTaGTCACTGGTGGAGACTTCG +
Preference number: 4 (lower is better)
Translates to: TSSETQRPTLAVRSLRTTWCWAP*SLVETS
Trigger: CGAAGTCTCCACCAGTGAGCACGGGGCCCAGCACCA...TGTGGTCCTCAGACTCCGCACAGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp CTTCATGCCCAGTCTGAAACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGAGGAGATGCTCACCCTaGATCCTTAAGGAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: LHAQSETGAPLTQRPSMRRRCSP*ILKEAQ
Trigger: CTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCT...CCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTTTCAGACTGGGCATGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACAGGAGATGCTCACCCTaGATCCTTAAGGAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHRRCSP*ILKEAQ
Trigger: CTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCT...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACTGTTCTGCAGGACACTaGCAGAGACGATCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHCSAGH*QRRSGQ
Trigger: CTGCCCAGATCGTCTCTGCCAGTGTCCTGCAGAACA...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CCA 90 bp GCTGGCTTGTGGGCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCAGAACCGCGAGGAAGTaGAGAAGACGGCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: AGLWANEVLMGSSSCCAPRTARK*RRRPGA
Trigger: TGCCCCAGGCCGTCTTCTCCACTTCCTCGCGGTTCT...GGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGCCCACAAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACTCATGTACTCGCACATaGGCGAGCGGTGGATACGGT +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHSCTRT*ASGGYG
Trigger: ACCGTATCCACCGCTCGCCCATGTGCGAGTACATGA...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CCA 90 bp CTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTCAAGCCTCAGGCAAGAGAGTGTGCTGGGGTAGGTaGGGAGGCCTCCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LREQCPPRVCQIQASGKRVCWGR*GGLLGP
Trigger: AGGACCCAGGAGGCCTCCCCACCTACCCCAGCACAC...TCTCTTGCCTGAGGCTTGAATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp GCGCCCGTTCTCCAGCCTGGCATACTCAGTCTCCACCTTCTCTACCACCTGTTTTGGGTGGGGGTACAGTaGCCACACATGCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: APVLQPGILSLHLLYHLFWVGVQ*PHMLEA
Trigger: AGCCTCCAGCATGTGTGGCCACTGTACCCCCACCCA...AAACAGGTGGTAGAGAAGGTGGAGACTGAGTATGCCAGGCTGGAGAACGGGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402886.9
CDS-3UTR CCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACGGTCCCTCAACTTCCTaGAGCCTGGGCACTTCATCT +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHGPSTS*SLGTSS
Trigger: AGATGAAGTGCCCAGGCTCCAGGAAGTTGAGGGACC...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp CTTCATGCCCAGTCTGAAACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCCCCTGGCTGGCTTGTaGGCTAATGAGGTGCTAATG +
Preference number: 4 (lower is better)
Translates to: LHAQSETGAPLTQRPSMRPLAGL*ANEVLM
Trigger: CATTAGCACCTCATTAGCCCACAAGCCAGCCAGGGG...CCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTTTCAGACTGGGCATGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp CCACACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCACCTCTCTGAGGTCACGATAAATACCCACAGGTaGCTGCTGGACAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PHMLEAEGVPYPHLSEVTINTHR*LLDRPS
Trigger: GCTGGGCCTGTCCAGCAGCCACCTGTGGGTATTTAT...CGTGACCTCAGAGAGGTGGGGATAGGGGACACCTTCAGCCTCCAGCATGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGATAAATACCCACAGGTaGCTGCTGGACAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGINTHR*LLDRPS
Trigger: GCTGGGCCTGTCCAGCAGCCACCTGTGGGTATTTAT...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCCCGAGATTTCCGCCTaGCTAGAACTTGCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGPEISA*LELASG
Trigger: GCCACTTGCAAGTTCTAGCCAGGCGGAAATCTCGGG...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639578.3
CDS-3UTR TCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGGGGCACCCTAGTCTTTaGCGAGCTTGTAGACATGGT +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGGHPSL*RACRHG
Trigger: ACCATGTCTACAAGCTCGTCAAAGACTAGGGTGCCC...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR TCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACGGGCACCCTAGTCTTTaGCGAGCTTGTAGACATGGT +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHGHPSL*RACRHG
Trigger: ACCATGTCTACAAGCTCGTCAAAGACTAGGGTGCCC...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR TCA 90 bp GCTGGCTTGTGGGCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCACAAGCAGCCCTGGATaGGAACTCCAGCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: AGLWANEVLMGSSSCCAPTSSPG*ELQLCP
Trigger: TGGGCAGAGCTGGAGTTCTCATCCAGGGCTGCTTGT...GGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGCCCACAAGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACGCCTTCAGCTTAGACTaGATCTCCCGAGATTTCCGC +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHAFSLD*ISRDFR
Trigger: GCGGAAATCTCGGGAGATTCAGTCTAAGCTGAAGGC...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639578.3
CDS-3UTR GCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACAGGACATGGACGCCATaGTCTGAAGGGCTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHRTWTP*SEGLCP
Trigger: AGGACAAAGCCCTTCAGAGCATGGCGTCCATGTCCT...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR GCA 90 bp AACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCATTCGTCTGGCCGATGTaGACAAACAGGTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: NRCSPNPAPLDEAPLHTAFVWPM*TNRCLL
Trigger: CAGCAAACACCTGTTTGTGCACATCGGCCAGACGAA...TGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGGGTGTGGAGAGGAGATaGTCACCCTGCATCCTTAAG +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGGVERR*SPCILK
Trigger: CTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACC...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR GCA 90 bp TCAACTTCCTGGAGCCTGGGCACTTCATCTGAAACCCAGAGACCTACGCTCGCTCATCCTGCCCTCACCTaGCCATCATGCTCCCCCAAG +
Preference number: 4 (lower is better)
Translates to: STSWSLGTSSETQRPTLAHPALT*PSCSPK
Trigger: CTTGGGGGAGCATGATGGGCAGGTGAGGGCAGGATG...AGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGTGCCCAGGCTCCAGGAAGTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp GTGCGGAGTCTGAGGACCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGATGGGGTCTAGTAGCTaGTGTGCTCCCTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: VRSLRTTQAMQGVWAPGLMGSSS*CAPFFM
Trigger: CATGAAGAAGGGAGCACAGCAGCTACTAGACCCCAT...CAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAGACTCCGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCGCCTGGCTAGAACTTaGAAGTGGCTAGAGACCTGT +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGRLART*KWLETC
Trigger: ACAGGTCTCTAGCCACTTGCAAGTTCTAGCCAGGCG...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639578.3
CDS-3UTR CCA 90 bp CACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCACCTCTCTGAGGTCACGCGATGGCGTTCCAGCTGTTaGACGCTATTGTGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: HMLEAEGVPYPHLSEVTRWRSSC*TLLCWL
Trigger: CAACCAGCACAATAGCGTCCAACAGCTGGAACGCCA...TCGCGTGACCTCAGAGAGGTGGGGATAGGGGACACCTTCAGCCTCCAGCATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACTGGCGTTCCAGCTGTTaGACGCTATTGTGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHWRSSC*TLLCWL
Trigger: CAACCAGCACAATAGCGTCCAACAGCTGGAACGCCA...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGGAAGGGCTTTGTCCTTaGAGACCTGGTCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGEGLCP*RPGPGS
Trigger: TGAACCTGGACCAGGTCTCCAAGGACAAAGCCCTTC...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CCA 90 bp GCGCCCGTTCTCCAGCCTGGCATACTCAGTCTCCACCTTCTCTACCACCTGTTTGGGGACAAGCAGCCCTaGATGAGAACTCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: APVLQPGILSLHLLYHLFGDKQP*MRTPAL
Trigger: CAGAGCTGGAGTTCTCATCCAGGGCTGCTTGTCCCC...AAACAGGTGGTAGAGAAGGTGGAGACTGAGTATGCCAGGCTGGAGAACGGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402886.9
CDS-3UTR CCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACTTGTCCTTGGAGACCTaGTCCAGGTTCATGGCCTTC +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHLSLET*SRFMAF
Trigger: GAAGGCCATGAACCTGGACCAGGTCTCCAAGGACAA...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639578.3
CDS-3UTR TCA 90 bp GCTGGCTTGTGGGCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCATGGACGCCATGCTCTaGAGGGCTTTGTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: AGLWANEVLMGSSSCCAPMDAML*RALSLE
Trigger: CTCCAAGGACAAAGCCCTTCAGAGCATGGCGTCCAT...GGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGCCCACAAGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp TCAACTTCCTGGAGCCTGGGCACTTCATCTGAAACCCAGAGACCTACGCTCGCTAGCTGTACTGAGAGCTaGCCCCATAGAAGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: STSWSLGTSSETQRPTLASCTES*PHRRLP
Trigger: CGGGAGCCTTCTATGGGGTCAGCTCTCAGTACAGCT...AGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGTGCCCAGGCTCCAGGAAGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp ACTTCGAAGACAAAAGCAATGACAAGCAGGGTCTCCTGGGAGTCCCGGCTCGTGGGCCTGGCAGGTAGATaGATCCTCAATCCTGGACCC +
Preference number: 4 (lower is better)
Translates to: TSKTKAMTSRVSWESRLVGLAGR*ILNPGP
Trigger: GGGTCCAGGATTGAGGATTCATCTACCTGCCAGGCC...CACGAGCCGGGACTCCCAGGAGACCCTGCTTGTCATTGCTTTTGTCTTCGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402886.9
CDS-3UTR GCA 90 bp CTGAGGACCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGGGACACAAAAGGACATGGACGCCATaGTCTGAAGGGCTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LRTTQAMQGVWAPGLGHKRTWTP*SEGLCP
Trigger: AGGACAAAGCCCTTCAGAGCATGGCGTCCATGTCCT...TTTGTGTCCCAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp TCAACTTCCTGGAGCCTGGGCACTTCATCTGAAACCCAGAGACCTACGCTCGCTGCAATGGTACGGTCCTaGCACACAGGCACAGAGGCA +
Preference number: 4 (lower is better)
Translates to: STSWSLGTSSETQRPTLAAMVRS*HTGTEA
Trigger: TGCCTCTGTGCCTGTGTGGCAGGACCGTACCATTGC...AGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGTGCCCAGGCTCCAGGAAGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACGCACAAACAGGTGTTTaGTGTACGTGTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHAQTGV*CTCQGL
Trigger: GAGACCCTGACACGTACAGCAAACACCTGTTTGTGC...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR GCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACTTCGTCTGGCCGATGTaGACAAACAGGTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHFVWPM*TNRCLL
Trigger: CAGCAAACACCTGTTTGTGCACATCGGCCAGACGAA...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR GCA 90 bp CTTCATGCCCAGTCTGAAACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGTCTCTACCACCTGTTTaGCAAAGGAGCACACCTTGG +
Preference number: 4 (lower is better)
Translates to: LHAQSETGAPLTQRPSMRSLPPV*QRSTPW
Trigger: CCAAGGTGTGCTCCTTTGGCAAACAGGTGGTAGAGA...CCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTTTCAGACTGGGCATGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGTCTCTACCACCTGTTTaGCAAAGGAGCACACCTTGG +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGSLPPV*QRSTPW
Trigger: CCAAGGTGTGCTCCTTTGGCAAACAGGTGGTAGAGA...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR GCA 90 bp GCTGATGGTCATGCTATCAGCAGAGCTGTACTGAGAGCTGACCCCATAGAAGGCCATCCTGCCCTCACCTaGCCATCATGCTCCCCCAAG +
Preference number: 4 (lower is better)
Translates to: ADGHAISRAVLRADPIEGHPALT*PSCSPK
Trigger: CTTGGGGGAGCATGATGGGCAGGTGAGGGCAGGATG...GCCTTCTATGGGGTCAGCTCTCAGTACAGCTCTGCTGATAGCATGACCATCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402886.9
CDS-3UTR GCA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACATGGGGTCTAGTAGCTaGTGTGCTCCCTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHMGSSS*CAPFFM
Trigger: CATGAAGAAGGGAGCACAGCAGCTACTAGACCCCAT...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp AACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAAAATCAAAAGCCTTCTaGTACTCTCTCCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: NRCSPNPAPLDEAPLHTAKSKAF*YSLPLG
Trigger: GCCCAGAGGGAGAGAGTAGCAGAAGGCTTTTGATTT...TGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp GTGCGGAGTCTGAGGACCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGAAATCAAAAGCCTTCTaGTACTCTCTCCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: VRSLRTTQAMQGVWAPGLKSKAF*YSLPLG
Trigger: GCCCAGAGGGAGAGAGTAGCAGAAGGCTTTTGATTT...CAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAGACTCCGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp TTGTGGGCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTTCTTCATACCCACAGGTGGCTaGTGGACAGGCCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LWANEVLMGSSSCCAPFFIPTGG*WTGPAG
Trigger: GCCAGCTGGGCCTGTCCAGCAGCCACCTGTGGGTAT...GAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGCCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp ACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGCCTCTCCCCTACCGCTCCAACCCCAAGCTaGATTTATGATATAACCCAT +
Preference number: 4 (lower is better)
Translates to: TQRPSMRLHSTLQSLSPTAPTPS*IYDITH
Trigger: ATGGGTTATATCATAAATGCAGCTTGGGGTTGGAGC...GGTAGGGGAGAGGCTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGGAACCTGTATGTGGCTaGACACCTGTTTTCTCGTCC +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGEPVCG*TPVFSS
Trigger: GGACGAGAAAACAGGTGTCCAGCCACATACAGGTTC...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338863.13
CDS-3UTR CCA 90 bp GTGCGGAGTCTGAGGACCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGGCTAGAACCTGTATGTaGCTGGACACCTGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: VRSLRTTQAMQGVWAPGLARTCM*LDTCFL
Trigger: GAGAAAACAGGTGTCCAGCCACATACAGGTTCTAGC...CAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAGACTCCGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338863.13
CDS-3UTR CCA 90 bp TCAACTTCCTGGAGCCTGGGCACTTCATCTGAAACCCAGAGACCTACGCTCGCTAAGGCGGGGTTCGTCTaGCCGATGTGCACAAACAGG +
Preference number: 4 (lower is better)
Translates to: STSWSLGTSSETQRPTLAKAGFV*PMCTNR
Trigger: CCTGTTTGTGCACATCGGCCAGACGAACCCCGCCTT...AGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGTGCCCAGGCTCCAGGAAGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp ACTTCATCTGAAACCCAGAGACCTACGCTCGCTGTGCGGAGTCTGAGGACCACACACATGGGCGAGCGGTaGATACGGTACACAAAGCGC +
Preference number: 4 (lower is better)
Translates to: TSSETQRPTLAVRSLRTTHMGER*IRYTKR
Trigger: GCGCTTTGTGTACCGTATCCACCGCTCGCCCATGTG...TGTGGTCCTCAGACTCCGCACAGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp ATTGAGGTGGGGAAGAACCTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTGAGGTCACGCGAGGCTaGGCAGAGCAGGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: IEVGKNLREQCPPRVCQIEVTRG*AEQGDG
Trigger: ACCATCACCCTGCTCTGCCCAGCCTCGCGTGACCTC...AATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAGGTTCTTCCCCACCTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp ACTTCATCTGAAACCCAGAGACCTACGCTCGCTGTGCGGAGTCTGAGGACCACAGGGGACAAGCAGCCCTaGATGAGAACTCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TSSETQRPTLAVRSLRTTGDKQP*MRTPAL
Trigger: CAGAGCTGGAGTTCTCATCCAGGGCTGCTTGTCCCC...TGTGGTCCTCAGACTCCGCACAGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp GCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTTCTTCATGCCCCAATCTGGAGGGTGCTaGGGGGTGCCCCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: ANEVLMGSSSCCAPFFMPQSGGC*GVPHLP
Trigger: AGGAAGATGGGGCACCCCCCAGCACCCTCCAGATTG...GGGCATGAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp GCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTTCTTCATGCCCAAGGGCTTGATGTCCTaGGAGGGTCCAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ANEVLMGSSSCCAPFFMPKGLMS*EGPGCC
Trigger: ACAGCAGCCTGGACCCTCTCAGGACATCAAGCCCTT...GGGCATGAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp GCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTTCTTCATGCCCCACCTCCATGAAGGCTaGATACTCCAGGAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: ANEVLMGSSSCCAPFFMPHLHEG*ILQEPQ
Trigger: CTGCGGCTCCTGGAGTATTCAGCCTTCATGGAGGTG...GGGCATGAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp ACTTCATCTGAAACCCAGAGACCTACGCTCGCTGTGCGGAGTCTGAGGACCACACTCGCTGCACCTCCATaGAGGCTGAATACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TSSETQRPTLAVRSLRTTLAAPP*RLNTPG
Trigger: TCCTGGAGTATTCAGCCTTCATGGAGGTGCAGCGAG...TGTGGTCCTCAGACTCCGCACAGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp GCTGGCTTGTGGGCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTCTTCATGCCCAGTCTaGAACAGGTGCTCCCCTAAC +
Preference number: 4 (lower is better)
Translates to: AGLWANEVLMGSSSCCAPSSCPV*NRCSPN
Trigger: GTTAGGGGAGCACCTGTTTCAGACTGGGCATGAAGA...GGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGCCCACAAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp GCGCCCGTTCTCCAGCCTGGCATACTCAGTCTCCACCTTCTCTACCACCTGTTTTCTTCATGCCCAGTCTaGAACAGGTGCTCCCCTAAC +
Preference number: 4 (lower is better)
Translates to: APVLQPGILSLHLLYHLFSSCPV*NRCSPN
Trigger: GTTAGGGGAGCACCTGTTTCAGACTGGGCATGAAGA...AAACAGGTGGTAGAGAAGGTGGAGACTGAGTATGCCAGGCTGGAGAACGGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402886.9
CDS-3UTR GCA 90 bp ACTTCGAAGACAAAAGCAATGACAAGCAGGGTCTCCTGGGAGTCCCGGCTCGTGGGGCTGAACTTGTTCTaGAGGACACTGGCAGAGACG +
Preference number: 4 (lower is better)
Translates to: TSKTKAMTSRVSWESRLVGLNLF*RTLAET
Trigger: CGTCTCTGCCAGTGTCCTGCAGAACAAGTTCAGCCC...CACGAGCCGGGACTCCCAGGAGACCCTGCTTGTCATTGCTTTTGTCTTCGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402886.9
CDS-3UTR GCA 90 bp CTGAGGACCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGGGACACAAAGCACAAACAGGTGTTTaGTGTACGTGTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: LRTTQAMQGVWAPGLGHKAQTGV*CTCQGL
Trigger: GAGACCCTGACACGTACAGCAAACACCTGTTTGTGC...TTTGTGTCCCAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp ACTTCATCTGAAACCCAGAGACCTACGCTCGCTGTGCGGAGTCTGAGGACCACAGCCTTGATGCCAACCTaGTACTCCCGCACCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TSSETQRPTLAVRSLRTTALMPT*YSRTFF
Trigger: GAAGAAGGTGCGGGAGTACCAGGTTGGCATCAAGGC...TGTGGTCCTCAGACTCCGCACAGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338863.13
CDS-3UTR CCA 90 bp ATTGAGGTGGGGAAGAACCTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTAGAACCGCGAGGAAGTaGAGAAGACGGCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: IEVGKNLREQCPPRVCQIRTARK*RRRPGA
Trigger: TGCCCCAGGCCGTCTTCTCCACTTCCTCGCGGTTCT...AATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAGGTTCTTCCCCACCTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp CTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTCAAGCCTCAGGCAAGAGAGGGCCCCGTGCTCACTaGTGGAGACTTCGAAGACAA +
Preference number: 4 (lower is better)
Translates to: LREQCPPRVCQIQASGKRGPRAH*WRLRRQ
Trigger: TTGTCTTCGAAGTCTCCACCAGTGAGCACGGGGCCC...TCTCTTGCCTGAGGCTTGAATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp ACTTCATCTGAAACCCAGAGACCTACGCTCGCTGTGCGGAGTCTGAGGACCACACCCCTGGCTGGCTTGTaGGCTAATGAGGTGCTAATG +
Preference number: 4 (lower is better)
Translates to: TSSETQRPTLAVRSLRTTPLAGL*ANEVLM
Trigger: CATTAGCACCTCATTAGCCCACAAGCCAGCCAGGGG...TGTGGTCCTCAGACTCCGCACAGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp ATTGAGGTGGGGAAGAACCTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTCCAGGTTCATGGCCTTaGTGCCAACCTGGTACTCCC +
Preference number: 4 (lower is better)
Translates to: IEVGKNLREQCPPRVCQIPGSWP*CQPGTP
Trigger: GGGAGTACCAGGTTGGCATCAAGGCCATGAACCTGG...AATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAGGTTCTTCCCCACCTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338863.13
CDS-3UTR TCA 90 bp CTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTCAAGCCTCAGGCAAGAGAATGGACGCCATGCTCTaGAGGGCTTTGTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LREQCPPRVCQIQASGKRMDAML*RALSLE
Trigger: CTCCAAGGACAAAGCCCTTCAGAGCATGGCGTCCAT...TCTCTTGCCTGAGGCTTGAATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp TTGTGGGCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTTCTTCACACATGCTGGAGGCTaGAGGTGTCCCCTATCCCCA +
Preference number: 4 (lower is better)
Translates to: LWANEVLMGSSSCCAPFFTHAGG*RCPLSP
Trigger: TGGGGATAGGGGACACCTTCAGCCTCCAGCATGTGT...GAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGCCCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR TCA 90 bp CTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTCAAGCCTCAGGCAAGAGACCTGGGCACTTCATCTaGAACCCAGAGACCTACGCT +
Preference number: 4 (lower is better)
Translates to: LREQCPPRVCQIQASGKRPGHFI*NPETYA
Trigger: AGCGTAGGTCTCTGGGTTTCAGATGAAGTGCCCAGG...TCTCTTGCCTGAGGCTTGAATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp TCAACTTCCTGGAGCCTGGGCACTTCATCTGAAACCCAGAGACCTACGCTCGCTAGGACATGGACGCCATaGTCTGAAGGGCTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: STSWSLGTSSETQRPTLARTWTP*SEGLCP
Trigger: AGGACAAAGCCCTTCAGAGCATGGCGTCCATGTCCT...AGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGTGCCCAGGCTCCAGGAAGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp CTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTCAAGCCTCAGGCAAGAGAGGGCTGAACTTGTTCTaGAGGACACTGGCAGAGACG +
Preference number: 4 (lower is better)
Translates to: LREQCPPRVCQIQASGKRGLNLF*RTLAET
Trigger: CGTCTCTGCCAGTGTCCTGCAGAACAAGTTCAGCCC...TCTCTTGCCTGAGGCTTGAATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp CTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTCAAGCCTCAGGCAAGAGAGTGTCAGGGTCTCGCTaGACCTCCATGAAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LREQCPPRVCQIQASGKRVSGSR*TSMKAE
Trigger: TTCAGCCTTCATGGAGGTGCAGCGAGACCCTGACAC...TCTCTTGCCTGAGGCTTGAATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp ATTGAGGTGGGGAAGAACCTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTCGGCTCGTGACCACCTaGAGGATGGTGAAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: IEVGKNLREQCPPRVCQIRLVTT*RMVKFS
Trigger: GGAGAACTTCACCATCCTGCAGGTGGTCACGAGCCG...AATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAGGTTCTTCCCCACCTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp GCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTTCTTCATGCCCTACAGTGGCCACACATaGTGGAGGCTGAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: ANEVLMGSSSCCAPFFMPYSGHT*WRLKVS
Trigger: GGACACCTTCAGCCTCCAGCATGTGTGGCCACTGTA...GGGCATGAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp TTGTGGGCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTTCTTCTGGACGCTATTGTGCTaGTTGCTCTGGGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LWANEVLMGSSSCCAPFFWTLLC*LLWALG
Trigger: GCCCAGAGCCCAGAGCAACCAGCACAATAGCGTCCA...GAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGCCCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp ACTTCATCTGAAACCCAGAGACCTACGCTCGCTGTGCGGAGTCTGAGGACCACAGAAGGGCTTTGTCCTTaGAGACCTGGTCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: TSSETQRPTLAVRSLRTTEGLCP*RPGPGS
Trigger: TGAACCTGGACCAGGTCTCCAAGGACAAAGCCCTTC...TGTGGTCCTCAGACTCCGCACAGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp TTGTGGGCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTTCTTCGCCCGTTCTCCAGCCTaGCATACTCAGTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: LWANEVLMGSSSCCAPFFARSPA*HTQSPP
Trigger: AGGTGGAGACTGAGTATGCCAGGCTGGAGAACGGGC...GAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGCCCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp GCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTTCTTCATGCCCTCATGTACTCGCACATaGGCGAGCGGTGGATACGGT +
Preference number: 4 (lower is better)
Translates to: ANEVLMGSSSCCAPFFMPSCTRT*ASGGYG
Trigger: ACCGTATCCACCGCTCGCCCATGTGCGAGTACATGA...GGGCATGAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp TCAACTTCCTGGAGCCTGGGCACTTCATCTGAAACCCAGAGACCTACGCTCGCTTATAAACCTGGGCTCTaGGGACAAGCAGCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: STSWSLGTSSETQRPTLAYKPGL*GQAALD
Trigger: ATCCAGGGCTGCTTGTCCCCAGAGCCCAGGTTTATA...AGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGTGCCCAGGCTCCAGGAAGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp TCAACTTCCTGGAGCCTGGGCACTTCATCTGAAACCCAGAGACCTACGCTCGCTTTGTCCTTGGAGACCTaGTCCAGGTTCATGGCCGTA +
Preference number: 4 (lower is better)
Translates to: STSWSLGTSSETQRPTLALSLET*SRFMAV
Trigger: TACGGCCATGAACCTGGACCAGGTCTCCAAGGACAA...AGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGTGCCCAGGCTCCAGGAAGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402886.9
CDS-3UTR CCA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGGCTAGAACTTGCAAGTaGCTAGAGACCTGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGARTCK*LETCFL
Trigger: GAGAAAACAGGTCTCTAGCCACTTGCAAGTTCTAGC...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639578.3
CDS-3UTR GCA 90 bp TCAACTTCCTGGAGCCTGGGCACTTCATCTGAAACCCAGAGACCTACGCTCGCTTCTCTACCACCTGTTTaGCAAAGGAGCACACCTTGG +
Preference number: 4 (lower is better)
Translates to: STSWSLGTSSETQRPTLASLPPV*QRSTPW
Trigger: CCAAGGTGTGCTCCTTTGGCAAACAGGTGGTAGAGA...AGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGTGCCCAGGCTCCAGGAAGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp CTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTCAAGCCTCAGGCAAGAGATTGTCCTTGGAGACCTaGTCCAGGTTCATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LREQCPPRVCQIQASGKRLSLET*SRFMAL
Trigger: CAAGGCCATGAACCTGGACCAGGTCTCCAAGGACAA...TCTCTTGCCTGAGGCTTGAATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338863.13
CDS-3UTR CCA 90 bp TTGTGGGCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTTCTTCTGTTCTGCAGGACACTaGCAGAGACGATCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LWANEVLMGSSSCCAPFFCSAGH*QRRSGQ
Trigger: CTGCCCAGATCGTCTCTGCCAGTGTCCTGCAGAACA...GAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGCCCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp CCACACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCACCTCTCTGAGGTCACGCAGTTTAATATAGCGTaGAATCAACTCATTTCGGCC +
Preference number: 4 (lower is better)
Translates to: PHMLEAEGVPYPHLSEVTQFNIA*NQLISA
Trigger: GGCCGAAATGAGTTGATTGCACGCTATATTAAACTG...CGTGACCTCAGAGAGGTGGGGATAGGGGACACCTTCAGCCTCCAGCATGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338863.13
CDS-3UTR GCA 90 bp TTGTGGGCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTTCTTCGGTGTGGAGAGGAGATaGTCACCCTGCATCCTTAAG +
Preference number: 4 (lower is better)
Translates to: LWANEVLMGSSSCCAPFFGVERR*SPCILK
Trigger: CTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACC...GAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGCCCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CCA 90 bp TTGTGGGCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTTCTTCGAAGGGCTTTGTCCTTaGAGACCTGGTCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: LWANEVLMGSSSCCAPFFEGLCP*RPGPGS
Trigger: TGAACCTGGACCAGGTCTCCAAGGACAAAGCCCTTC...GAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGCCCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp ATTGAGGTGGGGAAGAACCTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTGCACAAACAGGTGTTTaGTGTACGTGTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: IEVGKNLREQCPPRVCQIAQTGV*CTCQGL
Trigger: GAGACCCTGACACGTACAGCAAACACCTGTTTGTGC...AATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAGGTTCTTCCCCACCTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp ATTGAGGTGGGGAAGAACCTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTTTCGTCTGGCCGATGTaGACAAACAGGTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: IEVGKNLREQCPPRVCQIFVWPM*TNRCLL
Trigger: CAGCAAACACCTGTTTGTGCACATCGGCCAGACGAA...AATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAGGTTCTTCCCCACCTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR GCA 90 bp CTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTCAAGCCTCAGGCAAGAGAGCTCCAACCCCAAGCTaGATTTATGATATAACCCAT +
Preference number: 4 (lower is better)
Translates to: LREQCPPRVCQIQASGKRAPTPS*IYDITH
Trigger: ATGGGTTATATCATAAATGCAGCTTGGGGTTGGAGC...TCTCTTGCCTGAGGCTTGAATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS GCA 90 bp CCTTGTCCAGGCCCTCGGGCCCATCCTCCCGGGCCTCCCCGGGGCTaGTGCTGGCGTTCCAGCTGTTGGACGCTATTGTGCTGGTTGCTC +
Preference number: 5 (lower is better)
Translates to: PCPGPRAHPPGPPRG*CWRSSCWTLLCWLL
Trigger: GAGCAACCAGCACAATAGCGTCCAACAGCTGGAACGCCAGCAGCAGCCCCGGGGAGGCCCGGGAGGATGGGCCCGAGGGCCTGGACAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS CCA 90 bp CATCCTCCCGGGCCTCCCCGGGGCTGCTGCTGGCGTTCCAGCTGTTaGACGCTATTGTGCTGGTTGCTCTGGGCTCTGGGCCTGAGCCCA +
Preference number: 5 (lower is better)
Translates to: HPPGPPRGCCWRSSC*TLLCWLLWALGLSP
Trigger: TGGGCTCAGGCCCAGAGCCCAGAGCAACCAGCACAATAGCGTCCAACAGCTGGAACGCCAGCAGCAGCCCCGGGGAGGCCCGGGAGGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CAA 90 bp GTGCGGAGTCTGAGGACCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGTCGTTGTCCAGCCCCTaGTCCAGGCCCTCGGGCCCA +
Preference number: 5 (lower is better)
Translates to: VRSLRTTQAMQGVWAPGLSLSSP*SRPSGP
Trigger: TGGGCCCGAGGGCCTGGACAAGGGGCTGGACAACGA...CAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAGACTCCGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CAA 90 bp AGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGACGCCCTCCGCATCGTaGTCCAGCCCCTTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: RCSPNPAPLDEAPLHTAETPSAS*SSPLSR
Trigger: CCTGGACAAGGGGCTGGACAACGATGCGGAGGGCGT...CTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CAA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGTCGTTGTCCAGCCCCTaGTCCAGGCCCTCGGGCCCA +
Preference number: 5 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGSLSSP*SRPSGP
Trigger: TGGGCCCGAGGGCCTGGACAAGGGGCTGGACAACGA...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CAA 90 bp AACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAACGCCCTCCGCATCGTaGTCCAGCCCCTTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: NRCSPNPAPLDEAPLHTATPSAS*SSPLSR
Trigger: CCTGGACAAGGGGCTGGACAACGATGCGGAGGGCGT...TGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CAA 90 bp GCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGCCTCTCCCCTACCCTGCGTGCTCACTGACTCCCTaGGTCTCCATCCTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: APLDEAPLHTAEPLPYPACSLTP*VSILPS
Trigger: TGAGGGCAGGATGGAGACCAAGGGAGTCAGTGAGCA...CGCAGGGTAGGGGAGAGGCTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CAA 90 bp AGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGGGGCCCCTGGCTGGCTaGTGGGCTAATGAGGTGCTA +
Preference number: 5 (lower is better)
Translates to: RCSPNPAPLDEAPLHTAEGPLAG*WANEVL
Trigger: TAGCACCTCATTAGCCCACAAGCCAGCCAGGGGCCC...CTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CAA 90 bp GCCCTCACCTGCCCATCATGCTCCCCCAAGGGTGGGTGGGGGTACAGTGGCCACAGCTGTTGGACGCTATaGTGCTGGTTGCTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: ALTCPSCSPKGGWGYSGHSCWTL*CWLLWA
Trigger: AGCCCAGAGCAACCAGCACAATAGCGTCCAACAGCT...GTGGCCACTGTACCCCCACCCACCCTTGGGGGAGCATGATGGGCAGGTGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CAA 90 bp CTGAGGACCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGGGACACAAATCGTTGTCCAGCCCCTaGTCCAGGCCCTCGGGCCCA +
Preference number: 5 (lower is better)
Translates to: LRTTQAMQGVWAPGLGHKSLSSP*SRPSGP
Trigger: TGGGCCCGAGGGCCTGGACAAGGGGCTGGACAACGA...TTTGTGTCCCAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CAA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGACGCCCTCCGCATCGTaGTCCAGCCCCTTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGTPSAS*SSPLSR
Trigger: CCTGGACAAGGGGCTGGACAACGATGCGGAGGGCGT...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CAA 90 bp ACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGCCTCTCCCCTACCCCAAAGGAGCACACCTaGGTGGAGACGCTGATGGTC +
Preference number: 5 (lower is better)
Translates to: TQRPSMRLHSTLQSLSPTPKEHT*VETLMV
Trigger: GACCATCAGCGTCTCCACCAAGGTGTGCTCCTTTGG...GGTAGGGGAGAGGCTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CAA 90 bp CCACACATGCTGGAGGCTGAAGGTGTCCCCTATCCCCACCTCTCTGAGGTCACGGGGCCCCTGGCTGGCTaGTGGGCTAATGAGGTGCTA +
Preference number: 5 (lower is better)
Translates to: PHMLEAEGVPYPHLSEVTGPLAG*WANEVL
Trigger: TAGCACCTCATTAGCCCACAAGCCAGCCAGGGGCCC...CGTGACCTCAGAGAGGTGGGGATAGGGGACACCTTCAGCCTCCAGCATGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CAA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACACGCTATTGTGCTGGTaGCTCTGGGCTCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHTLLCW*LWALGL
Trigger: CAGGCCCAGAGCCCAGAGCAACCAGCACAATAGCGT...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CAA 90 bp AGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGTTTCGGCCGTACATCTaGCCCTCGTCTGACAGGATG +
Preference number: 5 (lower is better)
Translates to: RCSPNPAPLDEAPLHTAEFRPYI*PSSDRM
Trigger: CATCCTGTCAGACGAGGGCAAGATGTACGGCCGAAA...CTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338863.13
CDS-3UTR CAA 90 bp AGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCAGAGGAAGGTGGGCTGAACTaGTTCTGCAGGACACTGGCA +
Preference number: 5 (lower is better)
Translates to: RCSPNPAPLDEAPLHTAEEGGLN*FCRTLA
Trigger: TGCCAGTGTCCTGCAGAACAAGTTCAGCCCACCTTC...CTCTGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CAA 90 bp GCCCTCACCTGCCCATCATGCTCCCCCAAGGGTGGGTGGGGGTACAGTGGCCACTGCACAAACAGGTGTTaGCTGTACGTGTCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: ALTCPSCSPKGGWGYSGHCTNRC*LYVSGS
Trigger: AGACCCTGACACGTACAGCAAACACCTGTTTGTGCA...GTGGCCACTGTACCCCCACCCACCCTTGGGGGAGCATGATGGGCAGGTGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CAA 90 bp CTGAGGACCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGGGACACAAAACGCTATTGTGCTGGTaGCTCTGGGCTCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: LRTTQAMQGVWAPGLGHKTLLCW*LWALGL
Trigger: CAGGCCCAGAGCCCAGAGCAACCAGCACAATAGCGT...TTTGTGTCCCAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CAA 90 bp CTTCATGCCCAGTCTGAAACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCCAAAGGAGCACACCTaGGTGGAGACGCTGATGGTC +
Preference number: 5 (lower is better)
Translates to: LHAQSETGAPLTQRPSMRPKEHT*VETLMV
Trigger: GACCATCAGCGTCTCCACCAAGGTGTGCTCCTTTGG...CCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTTTCAGACTGGGCATGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CAA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCCAAAGGAGCACACCTaGGTGGAGACGCTGATGGTC +
Preference number: 5 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGPKEHT*VETLMV
Trigger: GACCATCAGCGTCTCCACCAAGGTGTGCTCCTTTGG...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CAA 90 bp AACAGGTGCTCCCCTAACCCAGCGCCCCTCGATGAGGCTCCACTCCACACTGCATCATGGCCGTACATCTaGCCCTCGTCTGACAGGATG +
Preference number: 5 (lower is better)
Translates to: NRCSPNPAPLDEAPLHTASWPYI*PSSDRM
Trigger: CATCCTGTCAGACGAGGGCAAGATGTACGGCCATGA...TGCAGTGTGGAGTGGAGCCTCATCGAGGGGCGCTGGGTTAGGGGAGCACCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402886.9
CDS-3UTR CAA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACAGCTGTTGGACGCTATaGTGCTGGTTGCTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHSCWTL*CWLLWA
Trigger: AGCCCAGAGCAACCAGCACAATAGCGTCCAACAGCT...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CAA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACCTGGCGTTCCAGCTGTaGGACGCTATTGTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHLAFQL*DAIVLV
Trigger: AACCAGCACAATAGCGTCCAACAGCTGGAACGCCAG...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CAA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACTTTCGGCCGTACATCTaGCCCTCGTCTGACAGGATG +
Preference number: 5 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHFRPYI*PSSDRM
Trigger: CATCCTGTCAGACGAGGGCAAGATGTACGGCCGAAA...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000639578.3
CDS-3UTR CAA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGGAAGGTGGGCTGAACTaGTTCTGCAGGACACTGGCA +
Preference number: 5 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGEGGLN*FCRTLA
Trigger: TGCCAGTGTCCTGCAGAACAAGTTCAGCCCACCTTC...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CAA 90 bp CTGAGGACCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGGGACACAAAGTGCCCACCAAGGGTTaGTCAGATTCAAGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: LRTTQAMQGVWAPGLGHKVPTKG*SDSSLR
Trigger: CCTGAGGCTTGAATCTGACAAACCCTTGGTGGGCAC...TTTGTGTCCCAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGGTCCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CAA 90 bp GCTGGCTTGTGGGCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTCCAGGTTCATGGCCTaGATGCCAACCTGGTACTCC +
Preference number: 5 (lower is better)
Translates to: AGLWANEVLMGSSSCCAPSRFMA*MPTWYS
Trigger: GGAGTACCAGGTTGGCATCAAGGCCATGAACCTGGA...GGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGCCCACAAGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338863.13
CDS-3UTR CAA 90 bp CCACACAAGCCATGCAAGGAGTCTGGGCACCAGGCCTGGGACACAAAGGGGCAATGCACAAACAGGTGTTaGCTGTACGTGTCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: PHKPCKESGHQAWDTKGQCTNRC*LYVSGS
Trigger: AGACCCTGACACGTACAGCAAACACCTGTTTGTGCA...TTGCCCCTTTGTGTCCCAGGCCTGGTGCCCAGACTCCTTGCATGGCTTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CAA 90 bp CAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGCACTGCACAAACAGGTGTTaGCTGTACGTGTCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: QVWRGDAHPASLRRRRGHCTNRC*LYVSGS
Trigger: AGACCCTGACACGTACAGCAAACACCTGTTTGTGCA...GTGCCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CAA 90 bp AGGCAGGTGTGGAGAGGAGATGCTCACCCTGCATCCTTAAGGAGGCGCAGAGGGTTCTCTACCACCTGTTaGCCAAAGGAGCACACCTTG +
Preference number: 5 (lower is better)
Translates to: RQVWRGDAHPASLRRRRGFSTTC*PKEHTL
Trigger: CAAGGTGTGCTCCTTTGGCAAACAGGTGGTAGAGAA...CCCTCTGCGCCTCCTTAAGGATGCAGGGTGAGCATCTCCTCTCCACACCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS-3UTR CAA 90 bp ATTGAGGTGGGGAAGAACCTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTACGCTATTGTGCTGGTaGCTCTGGGCTCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: IEVGKNLREQCPPRVCQITLLCW*LWALGL
Trigger: CAGGCCCAGAGCCCAGAGCAACCAGCACAATAGCGT...AATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAGGTTCTTCCCCACCTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CAA 90 bp ACTTCATCTGAAACCCAGAGACCTACGCTCGCTGTGCGGAGTCTGAGGACCACACTGGCGTTCCAGCTGTaGGACGCTATTGTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: TSSETQRPTLAVRSLRTTLAFQL*DAIVLV
Trigger: AACCAGCACAATAGCGTCCAACAGCTGGAACGCCAG...TGTGGTCCTCAGACTCCGCACAGCGAGCGTAGGTCTCTGGGTTTCAGATGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CAA 90 bp ACTTCGAAGACAAAAGCAATGACAAGCAGGGTCTCCTGGGAGTCCCGGCTCGTGGTGCCCACCAAGGGTTaGTCAGATTCAAGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: TSKTKAMTSRVSWESRLVVPTKG*SDSSLR
Trigger: CCTGAGGCTTGAATCTGACAAACCCTTGGTGGGCAC...CACGAGCCGGGACTCCCAGGAGACCCTGCTTGTCATTGCTTTTGTCTTCGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402886.9
CDS-3UTR CAA 90 bp GCTAATGAGGTGCTAATGGGGTCTAGTAGCTGCTGTGCTCCCTTCTTCATGCCCCTGGCGTTCCAGCTGTaGGACGCTATTGTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: ANEVLMGSSSCCAPFFMPLAFQL*DAIVLV
Trigger: AACCAGCACAATAGCGTCCAACAGCTGGAACGCCAG...GGGCATGAAGAAGGGAGCACAGCAGCTACTAGACCCCATTAGCACCTCATTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS-3UTR CAA 90 bp GCGCCCGTTCTCCAGCCTGGCATACTCAGTCTCCACCTTCTCTACCACCTGTTTTTCTCTACCACCTGTTaGCCAAAGGAGCACACCTTG +
Preference number: 5 (lower is better)
Translates to: APVLQPGILSLHLLYHLFFSTTC*PKEHTL
Trigger: CAAGGTGTGCTCCTTTGGCAAACAGGTGGTAGAGAA...AAACAGGTGGTAGAGAAGGTGGAGACTGAGTATGCCAGGCTGGAGAACGGGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402886.9
CDS-3UTR CAA 90 bp ATTGAGGTGGGGAAGAACCTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTTGCTCACTGACTCCCTaGGTCTCCATCCTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: IEVGKNLREQCPPRVCQICSLTP*VSILPS
Trigger: TGAGGGCAGGATGGAGACCAAGGGAGTCAGTGAGCA...AATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAGGTTCTTCCCCACCTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS TCA 90 bp TTGTCCTTGGAGACCTGGTCCAGGTTCATGGCCTTCAGCTTAGACTaGATCTCCCGAGATTTCCGCCTGGCTAGAACTTGCAAGTGGCTA +
Preference number: 5 (lower is better)
Translates to: LSLETWSRFMAFSLD*ISRDFRLARTCKWL
Trigger: TAGCCACTTGCAAGTTCTAGCCAGGCGGAAATCTCGGGAGATTCAGTCTAAGCTGAAGGCCATGAACCTGGACCAGGTCTCCAAGGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639578.3
CDS-3UTR CAA 90 bp CTAAGGGAGCAGTGCCCACCAAGGGTTTGTCAGATTCAAGCCTCAGGCAAGAGATTCTCTACCACCTGTTaGCCAAAGGAGCACACCTTG +
Preference number: 5 (lower is better)
Translates to: LREQCPPRVCQIQASGKRFSTTC*PKEHTL
Trigger: CAAGGTGTGCTCCTTTGGCAAACAGGTGGTAGAGAA...TCTCTTGCCTGAGGCTTGAATCTGACAAACCCTTGGTGGGCACTGCTCCCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338863.13
ENST00000402886.9
CDS CAA 90 bp CCATCCTCCCGGGCCTCCCCGGGGCTGCTGCTGGCGTTCCAGCTGTaGGACGCTATTGTGCTGGTTGCTCTGGGCTCTGGGCCTGAGCCC +
Preference number: 6 (lower is better)
Translates to: PSSRASPGLLLAFQL*DAIVLVALGSGPEP
Trigger: GGGCTCAGGCCCAGAGCCCAGAGCAACCAGCACAATAGCGTCCAACAGCTGGAACGCCAGCAGCAGCCCCGGGGAGGCCCGGGAGGATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS TCA 72 bp GGACGCTATTGTGCTGGTTGCTCTGGGCTCTGGGCCTaGGCCCACTGGGCGGCTGAGCCTGGTCCGAGCTCG +
Preference number: 6 (lower is better)
Translates to: GRYCAGCSGLWA*AHWAAEPGPSS
Trigger: CGAGCTCGGACCAGGCTCAGCCGCCCAGTGGGCTCAGGCCCAGAGCCCAGAGCAACCAGCACAATAGCGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS CAA 72 bp CGGGGCTGCTGCTGGCGTTCCAGCTGTTGGACGCTATaGTGCTGGTTGCTCTGGGCTCTGGGCCTGAGCCCA +
Preference number: 6 (lower is better)
Translates to: RGCCWRSSCWTL*CWLLWALGLSP
Trigger: TGGGCTCAGGCCCAGAGCCCAGAGCAACCAGCACAATAGCGTCCAACAGCTGGAACGCCAGCAGCAGCCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS GCA 72 bp GGCTGCTGCTGGCGTTCCAGCTGTTGGACGCTATTGTaGTGGTTGCTCTGGGCTCTGGGCCTGAGCCCACTG +
Preference number: 6 (lower is better)
Translates to: GCCWRSSCWTLL*WLLWALGLSPL
Trigger: CAGTGGGCTCAGGCCCAGAGCCCAGAGCAACCAGCACAATAGCGTCCAACAGCTGGAACGCCAGCAGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS CCA 72 bp TGCTGCTGGCGTTCCAGCTGTTGGACGCTATTGTGCTaGTTGCTCTGGGCTCTGGGCCTGAGCCCACTGGGC +
Preference number: 6 (lower is better)
Translates to: CCWRSSCWTLLC*LLWALGLSPLG
Trigger: GCCCAGTGGGCTCAGGCCCAGAGCCCAGAGCAACCAGCACAATAGCGTCCAACAGCTGGAACGCCAGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338863.13
ENST00000402886.9
ENST00000639578.3
CDS CCA 72 bp GAGACCTGGTCCAGGTTCATGGCCTTGATGCCAACCTaGTACTCCCGCACCTTCTTCCGAGCTAGAACCTGT +
Preference number: 6 (lower is better)
Translates to: ETWSRFMALMPT*YSRTFFRARTC
Trigger: ACAGGTTCTAGCTCGGAAGAAGGTGCGGGAGTACCAGGTTGGCATCAAGGCCATGAACCTGGACCAGGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338863.13
CDS TCA 72 bp GAGACCTGGTCCAGGTTCATGGCCTTCAGCTTAGACTaGATCTCCCGAGATTTCCGCCTGGCTAGAACTTGC +
Preference number: 6 (lower is better)
Translates to: ETWSRFMAFSLD*ISRDFRLARTC
Trigger: GCAAGTTCTAGCCAGGCGGAAATCTCGGGAGATTCAGTCTAAGCTGAAGGCCATGAACCTGGACCAGGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639578.3