RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TEAD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000074219

Ensembl transcript IDs: ENST00000311227.6, ENST00000377214.8, ENST00000539846.5, ENST00000593945.6, ENST00000596757.1, ENST00000598397.1, ENST00000598810.5, ENST00000598823.5, ENST00000601519.5

Found 457 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCAACTGCATCTGGCGGTTCCACGAAGGCTGAGAACTCTACCAGCTaGAACCGGGCGGTGCCCAGGCCCCGAGCCTGCCAGGCTGGGGGC +
Preference number: 1 (lower is better)
Translates to: STASGGSTKAENSTS*NRAVPRPRACQAGG
Trigger: GCCCCCAGCCTGGCAGGCTCGGGGCCTGGGCACCGCCCGGTTGCAGCTGGTAGAGTTCTCAGCCTTCGTGGAACCGCCAGATGCAGTTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598823.5
3UTR TCA 90 bp GTGCCTCTGGTAAGAATCAACTGCATCTGGCGGTTCCACGAAGGCTaGGAACTCTACCAGCTGCAACCGGGCGGTGCCCAGGCCCCGAGC +
Preference number: 1 (lower is better)
Translates to: VPLVRINCIWRFHEG*ELYQLQPGGAQAPS
Trigger: GCTCGGGGCCTGGGCACCGCCCGGTTGCAGCTGGTAGAGTTCTCAGCCTTCGTGGAACCGCCAGATGCAGTTGATTCTTACCAGAGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598823.5
3UTR TCA 90 bp GGGGGTTGTCTCACTCCTGTCCCCACAATCCCTGATACTCCGGAGTaGTCTGTCCTTTCAGACACCCACTGTGAGGTCCCAATATCGGGG +
Preference number: 1 (lower is better)
Translates to: GGCLTPVPTIPDTPE*SVLSDTHCEVPISG
Trigger: CCCCGATATTGGGACCTCACAGTGGGTGTCTGAAAGGACAGATCACTCCGGAGTATCAGGGATTGTGGGGACAGGAGTGAGACAACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR GCA 90 bp CAGGGCTCACTTAGGAGAGGGATGAGATTAGAAAGTTCAACACACTaGTTGTGCAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTAT +
Preference number: 1 (lower is better)
Translates to: QGSLRRGMRLESSTH*LCSGDKVKTLAPTY
Trigger: ATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGAACTTTCTAATCTCATCCCTCTCCTAAGTGAGCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR GCA 90 bp TCACTTAGGAGAGGGATGAGATTAGAAAGTTCAACACACTGCTTGTaGAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTATAAATAT +
Preference number: 1 (lower is better)
Translates to: SLRRGMRLESSTHCL*SGDKVKTLAPTYKY
Trigger: ATATTTATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGAACTTTCTAATCTCATCCCTCTCCTAAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR TCA 90 bp GATCTGCCGGACGTCCACACTCTCGAGCGGCGGCGCTCCGGGGCTGGGGCAGTGCGGTTCCACGAAGGCTaGGAACTCTACCAGCTGCAA +
Preference number: 2 (lower is better)
Translates to: DLPDVHTLERRRSGAGAVRFHEG*ELYQLQ
Trigger: TTGCAGCTGGTAGAGTTCTCAGCCTTCGTGGAACCG...CACTGCCCCAGCCCCGGAGCGCCGCCGCTCGAGAGTGTGGACGTCCGGCAGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598823.5
3UTR-3UTR CCA 90 bp TCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCACTGGAGGACCCTCCCTaGGAGGAGGGTGTTCTGGGG +
Preference number: 2 (lower is better)
Translates to: SDTHCEVPISGFILSSVPLEDPP*EEGVLG
Trigger: CCCCAGAACACCCTCCTCCCAGGGAGGGTCCTCCAG...TGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR CCA 90 bp CCCACCTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACTGGAGGACCCTCCCTaGGAGGAGGGTGTTCTGGGG +
Preference number: 2 (lower is better)
Translates to: PTWLCSCTERVHLHFVISLEDPP*EEGVLG
Trigger: CCCCAGAACACCCTCCTCCCAGGGAGGGTCCTCCAG...TGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR CCA 90 bp TACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGACCCTCGGGAGGAGGGTGTTCTaGGGGGTGAGCCAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: YITALSPNKKHEVSWRTLGRRVF*GVSQFW
Trigger: CCAAAACTGGCTCACCCCCCAGAACACCCTCCTCCC...GAGGGTCCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR CCA 90 bp CCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGGGGAGGAGGGTGTTCTaGGGGGTGAGCCAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: PLYITALSPNKKHEVSWRGRRVF*GVSQFW
Trigger: CCAAAACTGGCTCACCCCCCAGAACACCCTCCTCCC...CCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR CCA 90 bp CCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGCATGAGGTGAGCTaGAGGACCCTCCCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: PNIGVYPFLSPSLFSSPTKHEVS*RTLPGR
Trigger: CCTCCCAGGGAGGGTCCTCCAGCTCACCTCATGCTT...GGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR CCA 90 bp CCCACCTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCAAGACATGCAGAGGAGTaGGGGTGGCCTGTCAGGGGC +
Preference number: 2 (lower is better)
Translates to: PTWLCSCTERVHLHFVISRHAEE*GWPVRG
Trigger: GCCCCTGACAGGCCACCCCCACTCCTCTGCATGTCT...TGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR CCA 90 bp TTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCGGGAGGAGGGTGTTCTaGGGGGTGAGCCAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: FILSSVPACSALQPSFGGGRRVF*GVSQFW
Trigger: CCAAAACTGGCTCACCCCCCAGAACACCCTCCTCCC...GCCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR CCA 90 bp TGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGAGCTGGAGGACCCTCCCTaGGAGGAGGGTGTTCTGGGG +
Preference number: 2 (lower is better)
Translates to: CSCTERVHLHFVISQVMELEDPP*EEGVLG
Trigger: CCCCAGAACACCCTCCTCCCAGGGAGGGTCCTCCAG...CTCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR CCA 90 bp GCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATCTGGAGGACCCTCCCTaGGAGGAGGGTGTTCTGGGG +
Preference number: 2 (lower is better)
Translates to: ALLLHRKGSSSLCDLTGHLEDPP*EEGVLG
Trigger: CCCCAGAACACCCTCCTCCCAGGGAGGGTCCTCCAG...ATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR CCA 90 bp GTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAAAAGCATGAGGTGAGCTaGAGGACCCTCCCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: VPISGFILSSVPACSALQKHEVS*RTLPGR
Trigger: CCTCCCAGGGAGGGTCCTCCAGCTCACCTCATGCTT...TTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR CCA 90 bp AATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGGGGAGGAGGGTGTTCTaGGGGGTGAGCCAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: NIGVYPFLSPSLFSSPTKGRRVF*GVSQFW
Trigger: CCAAAACTGGCTCACCCCCCAGAACACCCTCCTCCC...CTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR CCA 90 bp CTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTAAGCATGAGGTGAGCTaGAGGACCCTCCCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: LALLLHRKGSSSLCDLTGKHEVS*RTLPGR
Trigger: CCTCCCAGGGAGGGTCCTCCAGCTCACCTCATGCTT...ACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR CCA 90 bp TCAACACACTGCTTGTGCAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTATGGGAGGAGGGTGTTCTaGGGGGTGAGCCAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: STHCLCSGDKVKTLAPTYGRRVF*GVSQFW
Trigger: CCAAAACTGGCTCACCCCCCAGAACACCCTCCTCCC...ATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR CCA 90 bp GCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATAAGCATGAGGTGAGCTaGAGGACCCTCCCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: ALLLHRKGSSSLCDLTGHKHEVS*RTLPGR
Trigger: CCTCCCAGGGAGGGTCCTCCAGCTCACCTCATGCTT...ATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR CCA 90 bp CTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTAGCCAGTGCTGTACCTaGGGGGTTGTCTCACTCCTG +
Preference number: 2 (lower is better)
Translates to: LALLLHRKGSSSLCDLTGSQCCT*GVVSLL
Trigger: CAGGAGTGAGACAACCCCCCAGGTACAGCACTGGCT...ACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR CCA 90 bp TCAACACACTGCTTGTGCAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTATTGTCCAGGGCCCACCTaGCTCTGCTCCTGCACAGAA +
Preference number: 2 (lower is better)
Translates to: STHCLCSGDKVKTLAPTYCPGPT*LCSCTE
Trigger: TTCTGTGCAGGAGCAGAGCCAGGTGGGCCCTGGACA...ATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR TCA 90 bp CAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGAGTTGCTTAGGCCTCTaGGGTCAACCCCTTTACATC +
Preference number: 2 (lower is better)
Translates to: QTPTVRSQYRGLSFPQSQSCLGL*GQPLYI
Trigger: GATGTAAAGGGGTTGACCTCAGAGGCCTAAGCAACT...CTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR TCA 90 bp CCCACCTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCATTCAGACACCCACTGTaGGGTCCCAATATCGGGGTT +
Preference number: 2 (lower is better)
Translates to: PTWLCSCTERVHLHFVISFRHPL*GPNIGV
Trigger: AACCCCGATATTGGGACCTCACAGTGGGTGTCTGAA...TGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR CCA 90 bp GAAGGAAACCGTCTAGCTCAGGGCTCACTTAGGAGAGGGATGAGATTAGAAAGTAGCCAGTGCTGTACCTaGGGGGTTGTCTCACTCCTG +
Preference number: 2 (lower is better)
Translates to: EGNRLAQGSLRRGMRLESSQCCT*GVVSLL
Trigger: CAGGAGTGAGACAACCCCCCAGGTACAGCACTGGCT...ACTTTCTAATCTCATCCCTCTCCTAAGTGAGCCCTGAGCTAGACGGTTTCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR CCA 90 bp TGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGAGAGCCAGTGCTGTACCTaGGGGGTTGTCTCACTCCTG +
Preference number: 2 (lower is better)
Translates to: CSCTERVHLHFVISQVMESQCCT*GVVSLL
Trigger: CAGGAGTGAGACAACCCCCCAGGTACAGCACTGGCT...CTCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR TCA 90 bp CCCACCTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCAAGTTGCTTAGGCCTCTaGGGTCAACCCCTTTACATC +
Preference number: 2 (lower is better)
Translates to: PTWLCSCTERVHLHFVISSCLGL*GQPLYI
Trigger: GATGTAAAGGGGTTGACCTCAGAGGCCTAAGCAACT...TGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR TCA 90 bp GTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGAGTTGCTTAGGCCTCTaGGGTCAACCCCTTTACATC +
Preference number: 2 (lower is better)
Translates to: VYPFLSPSLFSSPTKFWGSCLGL*GQPLYI
Trigger: GATGTAAAGGGGTTGACCTCAGAGGCCTAAGCAACT...CCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR TCA 90 bp CTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTTGTCCCCACAATCCCTaGTACTCCGGAGTGATCTGT +
Preference number: 2 (lower is better)
Translates to: LALLLHRKGSSSLCDLTGCPHNP*YSGVIC
Trigger: ACAGATCACTCCGGAGTATCAGGGATTGTGGGGACA...ACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR TCA 90 bp GCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATTGGCCTGTCAGGGGCTaGAAAGAAAAGCCAGTGCTG +
Preference number: 2 (lower is better)
Translates to: ALLLHRKGSSSLCDLTGHWPVRG*KEKPVL
Trigger: CAGCACTGGCTTTTCTTTTCAGCCCCTGACAGGCCA...ATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR TCA 90 bp TGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGAGTGGCCTGTCAGGGGCTaGAAAGAAAAGCCAGTGCTG +
Preference number: 2 (lower is better)
Translates to: CSCTERVHLHFVISQVMEWPVRG*KEKPVL
Trigger: CAGCACTGGCTTTTCTTTTCAGCCCCTGACAGGCCA...CTCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR TCA 90 bp ATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTAGTTGCTTAGGCCTCTaGGGTCAACCCCTTTACATC +
Preference number: 2 (lower is better)
Translates to: IGVYPFLSPSLFSSPTKFSCLGL*GQPLYI
Trigger: GATGTAAAGGGGTTGACCTCAGAGGCCTAAGCAACT...AAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR TCA 90 bp CTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTAGTTGCTTAGGCCTCTaGGGTCAACCCCTTTACATC +
Preference number: 2 (lower is better)
Translates to: LALLLHRKGSSSLCDLTGSCLGL*GQPLYI
Trigger: GATGTAAAGGGGTTGACCTCAGAGGCCTAAGCAACT...ACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR TCA 90 bp TGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGAGCCTGATACTCCGGAGTaGTCTGTCCTTTCAGACACC +
Preference number: 2 (lower is better)
Translates to: CSCTERVHLHFVISQVMEPDTPE*SVLSDT
Trigger: GGTGTCTGAAAGGACAGATCACTCCGGAGTATCAGG...CTCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR TCA 90 bp CTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGACCTGATACTCCGGAGTaGTCTGTCCTTTCAGACACC +
Preference number: 2 (lower is better)
Translates to: LLLHRKGSSSLCDLTGHGPDTPE*SVLSDT
Trigger: GGTGTCTGAAAGGACAGATCACTCCGGAGTATCAGG...TCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR TCA 90 bp GCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATTGTCCCCACAATCCCTaGTACTCCGGAGTGATCTGT +
Preference number: 2 (lower is better)
Translates to: ALLLHRKGSSSLCDLTGHCPHNP*YSGVIC
Trigger: ACAGATCACTCCGGAGTATCAGGGATTGTGGGGACA...ATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR TCA 90 bp TGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGAGTGTCCCCACAATCCCTaGTACTCCGGAGTGATCTGT +
Preference number: 2 (lower is better)
Translates to: CSCTERVHLHFVISQVMECPHNP*YSGVIC
Trigger: ACAGATCACTCCGGAGTATCAGGGATTGTGGGGACA...CTCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR TCA 90 bp TCAACACACTGCTTGTGCAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTATTGTCCCCACAATCCCTaGTACTCCGGAGTGATCTGT +
Preference number: 2 (lower is better)
Translates to: STHCLCSGDKVKTLAPTYCPHNP*YSGVIC
Trigger: ACAGATCACTCCGGAGTATCAGGGATTGTGGGGACA...ATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR GCA 90 bp GAAGGAAACCGTCTAGCTCAGGGCTCACTTAGGAGAGGGATGAGATTAGAAAGTTCAACACACTGCTTGTaGAGCGGAGATAAAGTCAAG +
Preference number: 2 (lower is better)
Translates to: EGNRLAQGSLRRGMRLESSTHCL*SGDKVK
Trigger: CTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA...ACTTTCTAATCTCATCCCTCTCCTAAGTGAGCCCTGAGCTAGACGGTTTCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR CAA 90 bp GGCTCACTTAGGAGAGGGATGAGATTAGAAAGTTCAACACACTGCTaGTGCAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTATAAA +
Preference number: 2 (lower is better)
Translates to: GSLRRGMRLESSTHC*CSGDKVKTLAPTYK
Trigger: TTTATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGAACTTTCTAATCTCATCCCTCTCCTAAGTGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR GCA 72 bp TCTGGCGGTTCCACGAAGGCTGAGAACTCTACCAGCTaGAACCGGGCGGTGCCCAGGCCCCGAGCCTGCCAG +
Preference number: 3 (lower is better)
Translates to: SGGSTKAENSTS*NRAVPRPRACQ
Trigger: CTGGCAGGCTCGGGGCCTGGGCACCGCCCGGTTGCAGCTGGTAGAGTTCTCAGCCTTCGTGGAACCGCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598823.5
3UTR TCA 72 bp GTAAGAATCAACTGCATCTGGCGGTTCCACGAAGGCTaGGAACTCTACCAGCTGCAACCGGGCGGTGCCCAG +
Preference number: 3 (lower is better)
Translates to: VRINCIWRFHEG*ELYQLQPGGAQ
Trigger: CTGGGCACCGCCCGGTTGCAGCTGGTAGAGTTCTCAGCCTTCGTGGAACCGCCAGATGCAGTTGATTCTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598823.5
3UTR-3UTR CAA 90 bp CGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGGATGGCCCCAGTaGCTTAGGCCTCTGAGGTCA +
Preference number: 3 (lower is better)
Translates to: RGLSFPQSQPVQLSNQVLGGWPQ*LRPLRS
Trigger: TGACCTCAGAGGCCTAAGCAACTGGGGCCATCCCCC...CAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR CAA 90 bp GGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGGGATGGCCCCAGTaGCTTAGGCCTCTGAGGTCA +
Preference number: 3 (lower is better)
Translates to: GVYPFLSPSLFSSPTKFWGGWPQ*LRPLRS
Trigger: TGACCTCAGAGGCCTAAGCAACTGGGGCCATCCCCC...CCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR CAA 90 bp TCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGGGGGATGGCCCCAGTaGCTTAGGCCTCTGAGGTCA +
Preference number: 3 (lower is better)
Translates to: SDTHCEVPISGFILSSVPGGWPQ*LRPLRS
Trigger: TGACCTCAGAGGCCTAAGCAACTGGGGCCATCCCCC...TGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR TCA 72 bp CTCACTCCTGTCCCCACAATCCCTGATACTCCGGAGTaGTCTGTCCTTTCAGACACCCACTGTGAGGTCCCA +
Preference number: 3 (lower is better)
Translates to: LTPVPTIPDTPE*SVLSDTHCEVP
Trigger: TGGGACCTCACAGTGGGTGTCTGAAAGGACAGATCACTCCGGAGTATCAGGGATTGTGGGGACAGGAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR CAA 90 bp TCAACACACTGCTTGTGCAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTATGGGGGATGGCCCCAGTaGCTTAGGCCTCTGAGGTCA +
Preference number: 3 (lower is better)
Translates to: STHCLCSGDKVKTLAPTYGGWPQ*LRPLRS
Trigger: TGACCTCAGAGGCCTAAGCAACTGGGGCCATCCCCC...ATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR CAA 90 bp TGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGAGGGGGGATGGCCCCAGTaGCTTAGGCCTCTGAGGTCA +
Preference number: 3 (lower is better)
Translates to: CSCTERVHLHFVISQVMEGGWPQ*LRPLRS
Trigger: TGACCTCAGAGGCCTAAGCAACTGGGGCCATCCCCC...CTCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR CAA 90 bp CTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCTCTCCAACCAAGTTTaGGGGGCCCCTCTAATGGGG +
Preference number: 3 (lower is better)
Translates to: LALLLHRKGSSSLCDLTGLSNQV*GAPLMG
Trigger: CCCCATTAGAGGGGCCCCCAAAACTTGGTTGGAGAG...ACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR-3UTR CAA 90 bp GAAGGAAACCGTCTAGCTCAGGGCTCACTTAGGAGAGGGATGAGATTAGAAAGTCTCTCCAACCAAGTTTaGGGGGCCCCTCTAATGGGG +
Preference number: 3 (lower is better)
Translates to: EGNRLAQGSLRRGMRLESLSNQV*GAPLMG
Trigger: CCCCATTAGAGGGGCCCCCAAAACTTGGTTGGAGAG...ACTTTCTAATCTCATCCCTCTCCTAAGTGAGCCCTGAGCTAGACGGTTTCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
3UTR TCA 72 bp TACTCCGGAGTGATCTGTCCTTTCAGACACCCACTGTaGGGTCCCAATATCGGGGTTTATCCTTTCCTCAGT +
Preference number: 3 (lower is better)
Translates to: YSGVICPFRHPL*GPNIGVYPFLS
Trigger: ACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGAAAGGACAGATCACTCCGGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp ACCAGCTGCAACCGGGCGGTGCCCAGGCCCCGAGCCTGCCAGGCTGGGGGCGATCCGAGCCTGCCAGGCTaGGGGCGATGGGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: TSCNRAVPRPRACQAGGDPSLPG*GRWGRW
Trigger: CCACCTACCCCATCGCCCCCAGCCTGGCAGGCTCGG...ATCGCCCCCAGCCTGGCAGGCTCGGGGCCTGGGCACCGCCCGGTTGCAGCTGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000598823.5
CDS-3UTR GCA 90 bp CCAGCTGCAACCGGGCGGTGCCCAGGCCCCGAGCCTGCCAGGCTGGGGGCGATGGAGAACTCTACCAGCTaGAACCGGGCGGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PAATGRCPGPEPARLGAMENSTS*NRAVPR
Trigger: CCTGGGCACCGCCCGGTTGCAGCTGGTAGAGTTCTC...CATCGCCCCCAGCCTGGCAGGCTCGGGGCCTGGGCACCGCCCGGTTGCAGCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598823.5
CDS-3UTR CCA 90 bp CCAGCTGCAACCGGGCGGTGCCCAGGCCCCGAGCCTGCCAGGCTGGGGGCGATGGGCGCGGAGATGAGCTaGGCAGAGGACATGGTTGCC +
Preference number: 4 (lower is better)
Translates to: PAATGRCPGPEPARLGAMGAEMS*AEDMVA
Trigger: GGCAACCATGTCCTCTGCCCAGCTCATCTCCGCGCC...CATCGCCCCCAGCCTGGCAGGCTCGGGGCCTGGGCACCGCCCGGTTGCAGCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598823.5
CDS-3UTR CCA 90 bp CCAGCTGCAACCGGGCGGTGCCCAGGCCCCGAGCCTGCCAGGCTGGGGGCGATGCAGTGGGACCCAGTTTaGCCTGCAGAGAAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: PAATGRCPGPEPARLGAMQWDPV*PAEKAR
Trigger: CCGCGCCTTCTCTGCAGGCCAAACTGGGTCCCACTG...CATCGCCCCCAGCCTGGCAGGCTCGGGGCCTGGGCACCGCCCGGTTGCAGCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598823.5
CDS-3UTR TCA 90 bp ATCTGCCGGACGTCCACACTCTCGAGCGGCGGCGCTCCGGGGCTGGGGCAGTGCGAGAAGGCGCGGAGATaGGCTGGGCAGAGGACATGG +
Preference number: 4 (lower is better)
Translates to: ICRTSTLSSGGAPGLGQCEKARR*AGQRTW
Trigger: CCATGTCCTCTGCCCAGCTCATCTCCGCGCCTTCTC...GCACTGCCCCAGCCCCGGAGCGCCGCCGCTCGAGAGTGTGGACGTCCGGCAGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598823.5
CDS-3UTR TCA 90 bp TGTCGTAGATCTGCCGGACGTCCACACTCTCGAGCGGCGGCGCTCCGGGGCTGGGAGGCCTGGACCACCTaGGGACCAGTGGGACCCAGT +
Preference number: 4 (lower is better)
Translates to: CRRSAGRPHSRAAALRGWEAWTT*GPVGPS
Trigger: ACTGGGTCCCACTGGTCCTCAGGTGGTCCAGGCCTC...CCAGCCCCGGAGCGCCGCCGCTCGAGAGTGTGGACGTCCGGCAGATCTACGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598823.5
CDS-3UTR CCA 90 bp GATCTGCCGGACGTCCACACTCTCGAGCGGCGGCGCTCCGGGGCTGGGGCAGTGCCACCTGAGGACCAGTaGGACCCAGTTTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: DLPDVHTLERRRSGAGAVPPEDQ*DPVWPA
Trigger: TGCAGGCCAAACTGGGTCCCACTGGTCCTCAGGTGG...CACTGCCCCAGCCCCGGAGCGCCGCCGCTCGAGAGTGTGGACGTCCGGCAGATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598823.5
CDS-3UTR CCA 90 bp ATCTGCCGGACGTCCACACTCTCGAGCGGCGGCGCTCCGGGGCTGGGGCAGTGCGCTGGGCAGAGGACATaGTTGCCATTGTCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: ICRTSTLSSGGAPGLGQCAGQRT*LPLSGK
Trigger: CTTTCCAGACAATGGCAACCATGTCCTCTGCCCAGC...GCACTGCCCCAGCCCCGGAGCGCCGCCGCTCGAGAGTGTGGACGTCCGGCAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598823.5
CDS-3UTR TCA 90 bp ATCTGCCGGACGTCCACACTCTCGAGCGGCGGCGCTCCGGGGCTGGGGCAGTGCCACAGTCCTAGCCAATaGGACGTTAGGGGAAATCTG +
Preference number: 4 (lower is better)
Translates to: ICRTSTLSSGGAPGLGQCHSPSQ*DVRGNL
Trigger: CAGATTTCCCCTAACGTCTCATTGGCTAGGACTGTG...GCACTGCCCCAGCCCCGGAGCGCCGCCGCTCGAGAGTGTGGACGTCCGGCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598823.5
CDS-3UTR GCA 90 bp AAGGCTGAGAACTCTACCAGCTGCAACCGGGCGGTGCCCAGGCCCCGAGCCTGCCAGTGCTGGCTGATGTaGACGAACAGGTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: KAENSTSCNRAVPRPRACQCWLM*TNRCLW
Trigger: CCAGAGGCACCTGTTCGTGCACATCAGCCAGCACTG...GCAGGCTCGGGGCCTGGGCACCGCCCGGTTGCAGCTGGTAGAGTTCTCAGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598823.5
CDS-3UTR TCA 90 bp AAGGCTGAGAACTCTACCAGCTGCAACCGGGCGGTGCCCAGGCCCCGAGCCTGCCGGTTCCACGAAGGCTaGGAACTCTACCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: KAENSTSCNRAVPRPRACRFHEG*ELYQLQ
Trigger: TTGCAGCTGGTAGAGTTCTCAGCCTTCGTGGAACCG...GCAGGCTCGGGGCCTGGGCACCGCCCGGTTGCAGCTGGTAGAGTTCTCAGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598823.5
CDS-3UTR GCA 90 bp CAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGGGGCGGGCGGGGCGCTaGGAGGGAGAAAGTTGCCGG +
Preference number: 4 (lower is better)
Translates to: QTPTVRSQYRGLSFPQSQGRAGR*EGESCR
Trigger: CCGGCAACTTTCTCCCTCGCAGCGCCCCGCCCGCCC...CTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311227.6
ENST00000539846.5
CDS-3UTR GCA 90 bp CCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGTGCCCGTCCAGCCGCTaGCATCGTCCAGGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: PLYITALSPNKKHEVSWRCPSSR*HRPGRP
Trigger: GGGCCGCCCTGGACGATGGCAGCGGCTGGACGGGCA...CCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp ATCTGCCGGACGTCCACACTCTCGAGCGGCGGCGCTCCGGGGCTGGGGCAGTGCATGGTTGCCATTGTCTaGAAAGCCTTGTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: ICRTSTLSSGGAPGLGQCMVAIV*KALSLE
Trigger: TTCCAAGGACAAGGCTTTCCAGACAATGGCAACCAT...GCACTGCCCCAGCCCCGGAGCGCCGCCGCTCGAGAGTGTGGACGTCCGGCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598823.5
CDS-3UTR CCA 90 bp AAGGCTGAGAACTCTACCAGCTGCAACCGGGCGGTGCCCAGGCCCCGAGCCTGCCCTCCAGACCAAAACTaGAAAAGCTCAGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KAENSTSCNRAVPRPRACPPDQN*KSSEAW
Trigger: CCAGGCCTCTGAGCTTTTCCAGTTTTGGTCTGGAGG...GCAGGCTCGGGGCCTGGGCACCGCCCGGTTGCAGCTGGTAGAGTTCTCAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598823.5
CDS-3UTR GCA 90 bp ACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGGGGCGGGCGGGGCGCTaGGAGGGAGAAAGTTGCCGG +
Preference number: 4 (lower is better)
Translates to: TVRSQYRGLSFPQSQPVQGRAGR*EGESCR
Trigger: CCGGCAACTTTCTCCCTCGCAGCGCCCCGCCCGCCC...CTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311227.6
ENST00000539846.5
CDS-3UTR GCA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGTGCCCGTCCAGCCGCTaGCATCGTCCAGGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: QPLYITALSPNKKHEVSWCPSSR*HRPGRP
Trigger: GGGCCGCCCTGGACGATGGCAGCGGCTGGACGGGCA...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCCCGAGCCTGCCAGGCTaGGGGCGATGGGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: PNIGVYPFLSPSLFSSPTPSLPG*GRWGRW
Trigger: CCACCTACCCCATCGCCCCCAGCCTGGCAGGCTCGG...GGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGCCGAGCCTGCCAGGCTaGGGGCGATGGGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: PLYITALSPNKKHEVSWRPSLPG*GRWGRW
Trigger: CCACCTACCCCATCGCCCCCAGCCTGGCAGGCTCGG...CCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp GTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAAGCTCCACACCCCCTCTaGATCCGGGCCCCCGTCACC +
Preference number: 4 (lower is better)
Translates to: VPISGFILSSVPACSALQAPHPL*IRAPVT
Trigger: GGTGACGGGGGCCCGGATGCAGAGGGGGTGTGGAGC...TTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp ACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGGCTGCCACCGGCCCCTaGCTCCTCACCACTTGGGCC +
Preference number: 4 (lower is better)
Translates to: TVRSQYRGLSFPQSQPVQAATGP*LLTTWA
Trigger: GGCCCAAGTGGTGAGGAGGCAGGGGCCGGTGGCAGC...CTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp ACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCCGAGCCTGCCAGGCTaGGGGCGATGGGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: TVRSQYRGLSFPQSQPVQPSLPG*GRWGRW
Trigger: CCACCTACCCCATCGCCCCCAGCCTGGCAGGCTCGG...CTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp TTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCCCGAGCCTGCCAGGCTaGGGGCGATGGGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: FILSSVPACSALQPSFGGPSLPG*GRWGRW
Trigger: CCACCTACCCCATCGCCCCCAGCCTGGCAGGCTCGG...GCCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCTGCCGTCCTCCAGCTaGGCCCGTTCCGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: QTPTVRSQYRGLSFPQSQLPSSS*ARSVST
Trigger: GGTGGAGACGGAACGGGCCCAGCTGGAGGACGGCAG...CTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCCTGCCGTCCTCCAGCTaGGCCCGTTCCGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: PNIGVYPFLSPSLFSSPTLPSSS*ARSVST
Trigger: GGTGGAGACGGAACGGGCCCAGCTGGAGGACGGCAG...GGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp GAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCTGCCGTCCTCCAGCTaGGCCCGTTCCGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: EVPISGFILSSVPACSALLPSSS*ARSVST
Trigger: GGTGGAGACGGAACGGGCCCAGCTGGAGGACGGCAG...GAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp GAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCAGAAGCCACCACTGCTaGTGCTGCCACCGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: EVPISGFILSSVPACSALRSHHC*CCHRPL
Trigger: CAGGGGCCGGTGGCAGCATCAGCAGTGGTGGCTTCT...GAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp TACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGACCCTCAGAAGCCACCACTGCTaGTGCTGCCACCGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: YITALSPNKKHEVSWRTLRSHHC*CCHRPL
Trigger: CAGGGGCCGGTGGCAGCATCAGCAGTGGTGGCTTCT...GAGGGTCCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCCTGGACTCCTGGGTCTaGGGGAAGAGGAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PNIGVYPFLSPSLFSSPTLDSWV*GKRSWG
Trigger: CCCCCAGCTCCTCTTCCCTCAGACCCAGGAGTCCAG...GGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377214.8
CDS-3UTR GCA 90 bp AATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGGCTCCACACCCCCTCTaGATCCGGGCCCCCGTCACC +
Preference number: 4 (lower is better)
Translates to: NIGVYPFLSPSLFSSPTKAPHPL*IRAPVT
Trigger: GGTGACGGGGGCCCGGATGCAGAGGGGGTGTGGAGC...CTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp CTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTGCTGCCACCGGCCCCTaGCTCCTCACCACTTGGGCC +
Preference number: 4 (lower is better)
Translates to: LALLLHRKGSSSLCDLTGAATGP*LLTTWA
Trigger: GGCCCAAGTGGTGAGGAGGCAGGGGCCGGTGGCAGC...ACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp TTTCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCCGAGCCTGCCAGGCTaGGGGCGATGGGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: FQTPTVRSQYRGLSFPQSPSLPG*GRWGRW
Trigger: CCACCTACCCCATCGCCCCCAGCCTGGCAGGCTCGG...GGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp TTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCCTGCCGTCCTCCAGCTaGGCCCGTTCCGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: FILSSVPACSALQPSFGGLPSSS*ARSVST
Trigger: GGTGGAGACGGAACGGGCCCAGCTGGAGGACGGCAG...GCCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CCCACCTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACTGCCGTCCTCCAGCTaGGCCCGTTCCGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: PTWLCSCTERVHLHFVISLPSSS*ARSVST
Trigger: GGTGGAGACGGAACGGGCCCAGCTGGAGGACGGCAG...TGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCAGGTACTCGCACATaGGCGAGCGCAGCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: QTPTVRSQYRGLSFPQSQPGTRT*ASAAGG
Trigger: ACCGCCTGCTGCGCTCGCCCATGTGCGAGTACCTGG...CTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp GAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCTGGAGGACCCTCCCTaGGAGGAGGGTGTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: EVPISGFILSSVPACSALLEDPP*EEGVLG
Trigger: CCCCAGAACACCCTCCTCCCAGGGAGGGTCCTCCAG...GAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCCTGGAGGACCCTCCCTaGGAGGAGGGTGTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PNIGVYPFLSPSLFSSPTLEDPP*EEGVLG
Trigger: CCCCAGAACACCCTCCTCCCAGGGAGGGTCCTCCAG...GGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp GAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCGAGAAGGCGCGGAGATaGGCTGGGCAGAGGACATGG +
Preference number: 4 (lower is better)
Translates to: EVPISGFILSSVPACSALEKARR*AGQRTW
Trigger: CCATGTCCTCTGCCCAGCTCATCTCCGCGCCTTCTC...GAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp TACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGACCCTCGAGAAGGCGCGGAGATaGGCTGGGCAGAGGACATGG +
Preference number: 4 (lower is better)
Translates to: YITALSPNKKHEVSWRTLEKARR*AGQRTW
Trigger: CCATGTCCTCTGCCCAGCTCATCTCCGCGCCTTCTC...GAGGGTCCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CCCACCTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCAAGAAGCCACCACTGCTaGTGCTGCCACCGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: PTWLCSCTERVHLHFVISRSHHC*CCHRPL
Trigger: CAGGGGCCGGTGGCAGCATCAGCAGTGGTGGCTTCT...TGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp GGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGAGAAGCCACCACTGCTaGTGCTGCCACCGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GVYPFLSPSLFSSPTKFWRSHHC*CCHRPL
Trigger: CAGGGGCCGGTGGCAGCATCAGCAGTGGTGGCTTCT...CCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp TTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCAGAAGCCACCACTGCTaGTGCTGCCACCGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: FILSSVPACSALQPSFGGRSHHC*CCHRPL
Trigger: CAGGGGCCGGTGGCAGCATCAGCAGTGGTGGCTTCT...GCCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp TCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAAGAAGCCACCACTGCTaGTGCTGCCACCGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SDTHCEVPISGFILSSVPRSHHC*CCHRPL
Trigger: CAGGGGCCGGTGGCAGCATCAGCAGTGGTGGCTTCT...TGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp GGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGAGGCCTGGACCACCTaGGGACCAGTGGGACCCAGT +
Preference number: 4 (lower is better)
Translates to: GVYPFLSPSLFSSPTKFWEAWTT*GPVGPS
Trigger: ACTGGGTCCCACTGGTCCTCAGGTGGTCCAGGCCTC...CCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377214.8
ENST00000539846.5
ENST00000601519.5
CDS-3UTR GCA 90 bp CAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCACTGCCTTCCTCACTaGCCGTCCAGCCGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: QTPTVRSQYRGLSFPQSQHCLPH*PSSRCH
Trigger: ATGGCAGCGGCTGGACGGGCAGTGAGGAAGGCAGTG...CTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp CCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCCGGTACCCTCCTCACTaGCTTCCTCACTGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: PNIGVYPFLSPSLFSSPTRYPPH*LPHCPS
Trigger: GGACGGGCAGTGAGGAAGGCAGTGAGGAGGGTACCG...GGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGAGGCTCCACACCCCCTCTaGATCCGGGCCCCCGTCACC +
Preference number: 4 (lower is better)
Translates to: CSCTERVHLHFVISQVMEAPHPL*IRAPVT
Trigger: GGTGACGGGGGCCCGGATGCAGAGGGGGTGTGGAGC...CTCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TCAACACACTGCTTGTGCAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTATGCTCCACACCCCCTCTaGATCCGGGCCCCCGTCACC +
Preference number: 4 (lower is better)
Translates to: STHCLCSGDKVKTLAPTYAPHPL*IRAPVT
Trigger: GGTGACGGGGGCCCGGATGCAGAGGGGGTGTGGAGC...ATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp CAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGGAGAACTCTACCAGCTaGAACCGGGCGGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QTPTVRSQYRGLSFPQSQENSTS*NRAVPR
Trigger: CCTGGGCACCGCCCGGTTGCAGCTGGTAGAGTTCTC...CTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TCAACACACTGCTTGTGCAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTATGCTGCCACCGGCCCCTaGCTCCTCACCACTTGGGCC +
Preference number: 4 (lower is better)
Translates to: STHCLCSGDKVKTLAPTYAATGP*LLTTWA
Trigger: GGCCCAAGTGGTGAGGAGGCAGGGGCCGGTGGCAGC...ATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGACCCTCGGCGGTACACAAATCTaGCGTCCTCCAGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: YITALSPNKKHEVSWRTLGGTQI*RPPAGP
Trigger: GGGCCCAGCTGGAGGACGGCAGATTTGTGTACCGCC...GAGGGTCCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGACCCTCGCGCTCTCCAAGACATaGAGAGGAGTGGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: YITALSPNKKHEVSWRTLALSKT*RGVGVA
Trigger: GGCCACCCCCACTCCTCTGCATGTCTTGGAGAGCGC...GAGGGTCCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp GAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCGCGCTCTCCAAGACATaGAGAGGAGTGGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: EVPISGFILSSVPACSALALSKT*RGVGVA
Trigger: GGCCACCCCCACTCCTCTGCATGTCTTGGAGAGCGC...GAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp TACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGACCCTCCAGTGGGACCCAGTTTaGCCTGCAGAGAAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: YITALSPNKKHEVSWRTLQWDPV*PAEKAR
Trigger: CCGCGCCTTCTCTGCAGGCCAAACTGGGTCCCACTG...GAGGGTCCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGCAGTGGGACCCAGTTTaGCCTGCAGAGAAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: PLYITALSPNKKHEVSWRQWDPV*PAEKAR
Trigger: CCGCGCCTTCTCTGCAGGCCAAACTGGGTCCCACTG...CCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCAGTGGGACCCAGTTTaGCCTGCAGAGAAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: QTPTVRSQYRGLSFPQSQQWDPV*PAEKAR
Trigger: CCGCGCCTTCTCTGCAGGCCAAACTGGGTCCCACTG...CTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp GCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATCCGAGCCTGCCAGGCTaGGGGCGATGGGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: ALLLHRKGSSSLCDLTGHPSLPG*GRWGRW
Trigger: CCACCTACCCCATCGCCCCCAGCCTGGCAGGCTCGG...ATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCGGGCTGGGGCAGTGCTaGCTGATGTGCACGAACAGG +
Preference number: 4 (lower is better)
Translates to: PNIGVYPFLSPSLFSSPTGLGQC*LMCTNR
Trigger: CCTGTTCGTGCACATCAGCCAGCACTGCCCCAGCCC...GGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp GGTGCCTCTGGTAAGAATCAACTGCATCTGGCGGTTCCACGAAGGCTGAGAACTGGGCTGGGGCAGTGCTaGCTGATGTGCACGAACAGG +
Preference number: 4 (lower is better)
Translates to: GASGKNQLHLAVPRRLRTGLGQC*LMCTNR
Trigger: CCTGTTCGTGCACATCAGCCAGCACTGCCCCAGCCC...AGTTCTCAGCCTTCGTGGAACCGCCAGATGCAGTTGATTCTTACCAGAGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598823.5
CDS-3UTR CCA 90 bp CAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGGGGCTGGGGCAGTGCTaGCTGATGTGCACGAACAGG +
Preference number: 4 (lower is better)
Translates to: QTPTVRSQYRGLSFPQSQGLGQC*LMCTNR
Trigger: CCTGTTCGTGCACATCAGCCAGCACTGCCCCAGCCC...CTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGCCAGGTACTCGCACATaGGCGAGCGCAGCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: QPLYITALSPNKKHEVSWPGTRT*ASAAGG
Trigger: ACCGCCTGCTGCGCTCGCCCATGTGCGAGTACCTGG...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGCTGGAGGACCCTCCCTaGGAGGAGGGTGTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: RGLSFPQSQPVQLSNQVLLEDPP*EEGVLG
Trigger: CCCCAGAACACCCTCCTCCCAGGGAGGGTCCTCCAG...CAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGAGACATGCAGAGGAGTaGGGGTGGCCTGTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PLYITALSPNKKHEVSWRRHAEE*GWPVRG
Trigger: GCCCCTGACAGGCCACCCCCACTCCTCTGCATGTCT...CCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGCACAGAACCACAAGCTaGGGGACAGGGGCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: QPLYITALSPNKKHEVSWHRTTS*GTGAPC
Trigger: GCAGGGCGCCCCTGTCCCCCAGCTTGTGGTTCTGTG...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000598810.5
CDS-3UTR TCA 90 bp GTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGGAGAAGGCGCGGAGATaGGCTGGGCAGAGGACATGG +
Preference number: 4 (lower is better)
Translates to: VYPFLSPSLFSSPTKFWGEKARR*AGQRTW
Trigger: CCATGTCCTCTGCCCAGCTCATCTCCGCGCCTTCTC...CCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGAGAAGGCGCGGAGATaGGCTGGGCAGAGGACATGG +
Preference number: 4 (lower is better)
Translates to: RGLSFPQSQPVQLSNQVLEKARR*AGQRTW
Trigger: CCATGTCCTCTGCCCAGCTCATCTCCGCGCCTTCTC...CAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp TTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCGAGAAGGCGCGGAGATaGGCTGGGCAGAGGACATGG +
Preference number: 4 (lower is better)
Translates to: FILSSVPACSALQPSFGGEKARR*AGQRTW
Trigger: CCATGTCCTCTGCCCAGCTCATCTCCGCGCCTTCTC...GCCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGGGAGGATCTGGGGCCTaGACTCCTGAGTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: PLYITALSPNKKHEVSWRGGSGA*TPESEG
Trigger: TCCCTCAGACTCAGGAGTTCAGGCCCCAGATCCTCC...CCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000377214.8
CDS-3UTR TCA 90 bp ACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGGGGTATTCCTGGGTCTaGGGGAGGAGGATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TVRSQYRGLSFPQSQPVQGYSWV*GRRIWG
Trigger: GCCCCAGATCCTCCTCCCTCAGACCCAGGAATACCC...CTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000377214.8
CDS-3UTR TCA 90 bp TTTCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCGAGGCCTGGACCACCTaGGGACCAGTGGGACCCAGT +
Preference number: 4 (lower is better)
Translates to: FQTPTVRSQYRGLSFPQSEAWTT*GPVGPS
Trigger: ACTGGGTCCCACTGGTCCTCAGGTGGTCCAGGCCTC...GGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377214.8
ENST00000601519.5
CDS-3UTR TCA 90 bp ATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTGAGGCCTGGACCACCTaGGGACCAGTGGGACCCAGT +
Preference number: 4 (lower is better)
Translates to: IGVYPFLSPSLFSSPTKFEAWTT*GPVGPS
Trigger: ACTGGGTCCCACTGGTCCTCAGGTGGTCCAGGCCTC...AAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377214.8
ENST00000539846.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCCGGTACCCTCCTCACTaGCTTCCTCACTGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: FILSSVPACSALQPSFGGRYPPH*LPHCPS
Trigger: GGACGGGCAGTGAGGAAGGCAGTGAGGAGGGTACCG...GCCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp GTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGGAGAACTCTACCAGCTaGAACCGGGCGGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VYPFLSPSLFSSPTKFWGENSTS*NRAVPR
Trigger: CCTGGGCACCGCCCGGTTGCAGCTGGTAGAGTTCTC...CCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp GTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAAGAGAACTCTACCAGCTaGAACCGGGCGGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VPISGFILSSVPACSALQENSTS*NRAVPR
Trigger: CCTGGGCACCGCCCGGTTGCAGCTGGTAGAGTTCTC...TTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp ACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGGAGAACTCTACCAGCTaGAACCGGGCGGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TVRSQYRGLSFPQSQPVQENSTS*NRAVPR
Trigger: CCTGGGCACCGCCCGGTTGCAGCTGGTAGAGTTCTC...CTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGACCCTCGGGCCCACCTGGCTCTaGTCCTGCACAGAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: YITALSPNKKHEVSWRTLGPTWL*SCTERV
Trigger: AACCCTTTCTGTGCAGGAGCAGAGCCAGGTGGGCCC...GAGGGTCCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp GGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGCGCGGAGATGAGCTaGGCAGAGGACATGGTTGCC +
Preference number: 4 (lower is better)
Translates to: GVYPFLSPSLFSSPTKFWGAEMS*AEDMVA
Trigger: GGCAACCATGTCCTCTGCCCAGCTCATCTCCGCGCC...CCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGCGCGGAGATGAGCTaGGCAGAGGACATGGTTGCC +
Preference number: 4 (lower is better)
Translates to: RGLSFPQSQPVQLSNQVLGAEMS*AEDMVA
Trigger: GGCAACCATGTCCTCTGCCCAGCTCATCTCCGCGCC...CAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp ACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGGGCGCGGAGATGAGCTaGGCAGAGGACATGGTTGCC +
Preference number: 4 (lower is better)
Translates to: TVRSQYRGLSFPQSQPVQGAEMS*AEDMVA
Trigger: GGCAACCATGTCCTCTGCCCAGCTCATCTCCGCGCC...CTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGCAGTGGGACCCAGTTTaGCCTGCAGAGAAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: QPLYITALSPNKKHEVSWQWDPV*PAEKAR
Trigger: CCGCGCCTTCTCTGCAGGCCAAACTGGGTCCCACTG...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGGGGCTGGGGCAGTGCTaGCTGATGTGCACGAACAGG +
Preference number: 4 (lower is better)
Translates to: QPLYITALSPNKKHEVSWGLGQC*LMCTNR
Trigger: CCTGTTCGTGCACATCAGCCAGCACTGCCCCAGCCC...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp GTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGGGGCTGGGGCAGTGCTaGCTGATGTGCACGAACAGG +
Preference number: 4 (lower is better)
Translates to: VYPFLSPSLFSSPTKFWGGLGQC*LMCTNR
Trigger: CCTGTTCGTGCACATCAGCCAGCACTGCCCCAGCCC...CCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAAC
57% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp TCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGGGCTGGGGCAGTGCTaGCTGATGTGCACGAACAGG +
Preference number: 4 (lower is better)
Translates to: SDTHCEVPISGFILSSVPGLGQC*LMCTNR
Trigger: CCTGTTCGTGCACATCAGCCAGCACTGCCCCAGCCC...TGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGTGCCTCCTCACCACTTaGGCCCCAGTTCAGGTCCGC +
Preference number: 4 (lower is better)
Translates to: QPLYITALSPNKKHEVSWCLLTT*APVQVR
Trigger: GCGGACCTGAACTGGGGCCCAAGTGGTGAGGAGGCA...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp TTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCTGCCTCCTCACCACTTaGGCCCCAGTTCAGGTCCGC +
Preference number: 4 (lower is better)
Translates to: FILSSVPACSALQPSFGGCLLTT*APVQVR
Trigger: GCGGACCTGAACTGGGGCCCAAGTGGTGAGGAGGCA...GCCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp GGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGTGCCTCCTCACCACTTaGGCCCCAGTTCAGGTCCGC +
Preference number: 4 (lower is better)
Translates to: GVYPFLSPSLFSSPTKFWCLLTT*APVQVR
Trigger: GCGGACCTGAACTGGGGCCCAAGTGGTGAGGAGGCA...CCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp ACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGTGCCTCCTCACCACTTaGGCCCCAGTTCAGGTCCGC +
Preference number: 4 (lower is better)
Translates to: TVRSQYRGLSFPQSQPVQCLLTT*APVQVR
Trigger: GCGGACCTGAACTGGGGCCCAAGTGGTGAGGAGGCA...CTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGACTGCCGTCCTCCAGCTaGGCCCGTTCCGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: LLLHRKGSSSLCDLTGHGLPSSS*ARSVST
Trigger: GGTGGAGACGGAACGGGCCCAGCTGGAGGACGGCAG...TCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp ACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGGGGCCCCACGCTCGCTaGTGGAGACCTCGAAGACAT +
Preference number: 4 (lower is better)
Translates to: TVRSQYRGLSFPQSQPVQGPHAR*WRPRRH
Trigger: ATGTCTTCGAGGTCTCCACCAGCGAGCGTGGGGCCC...CTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGCCCCACGCTCGCTaGTGGAGACCTCGAAGACAT +
Preference number: 4 (lower is better)
Translates to: RGLSFPQSQPVQLSNQVLGPHAR*WRPRRH
Trigger: ATGTCTTCGAGGTCTCCACCAGCGAGCGTGGGGCCC...CAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp GTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAAGGGCCCCACGCTCGCTaGTGGAGACCTCGAAGACAT +
Preference number: 4 (lower is better)
Translates to: VPISGFILSSVPACSALQGPHAR*WRPRRH
Trigger: ATGTCTTCGAGGTCTCCACCAGCGAGCGTGGGGCCC...TTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCGGGAGGAGGGTGTTCTaGGGGGTGAGCCAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: PNIGVYPFLSPSLFSSPTGRRVF*GVSQFW
Trigger: CCAAAACTGGCTCACCCCCCAGAACACCCTCCTCCC...GGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp GAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCGGGAGGAGGGTGTTCTaGGGGGTGAGCCAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: EVPISGFILSSVPACSALGRRVF*GVSQFW
Trigger: CCAAAACTGGCTCACCCCCCAGAACACCCTCCTCCC...GAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp ATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTCTGGAGGACCCTCCCTaGGAGGAGGGTGTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: IGVYPFLSPSLFSSPTKFLEDPP*EEGVLG
Trigger: CCCCAGAACACCCTCCTCCCAGGGAGGGTCCTCCAG...AAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGAAGCATGAGGTGAGCTaGAGGACCCTCCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: QTPTVRSQYRGLSFPQSQKHEVS*RTLPGR
Trigger: CCTCCCAGGGAGGGTCCTCCAGCTCACCTCATGCTT...CTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGAGACATGCAGAGGAGTaGGGGTGGCCTGTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RGLSFPQSQPVQLSNQVLRHAEE*GWPVRG
Trigger: GCCCCTGACAGGCCACCCCCACTCCTCTGCATGTCT...CAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCCGGGGTTCCCCCATCTaGGCCTGGAGGAACACAGAA +
Preference number: 4 (lower is better)
Translates to: PNIGVYPFLSPSLFSSPTRGSPI*AWRNTE
Trigger: TTCTGTGTTCCTCCAGGCCCAGATGGGGGAACCCCG...GGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377214.8
CDS-3UTR TCA 90 bp CCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGAAAAGCTCAGAGGCCTaGGGACCAGTGGGACCCAGT +
Preference number: 4 (lower is better)
Translates to: PLYITALSPNKKHEVSWRKSSEA*GPVGPS
Trigger: ACTGGGTCCCACTGGTCCTCAGGCCTCTGAGCTTTT...CCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311227.6
ENST00000593945.6
ENST00000598810.5
CDS-3UTR TCA 90 bp CCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCCCTTGGAGGAACAGGTaGGGGTCATGTGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PNIGVYPFLSPSLFSSPTPWRNR*GSCVPG
Trigger: GCCTGGAACACATGACCCTCACCTGTTCCTCCAAGG...GGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTTGGAGGAACAGGTaGGGGTCATGTGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: QTPTVRSQYRGLSFPQSQPWRNR*GSCVPG
Trigger: GCCTGGAACACATGACCCTCACCTGTTCCTCCAAGG...CTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp AATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGCACTGCCTTCCTCACTaGCCGTCCAGCCGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: NIGVYPFLSPSLFSSPTKHCLPH*PSSRCH
Trigger: ATGGCAGCGGCTGGACGGGCAGTGAGGAAGGCAGTG...CTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TTTCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCACTGCCTTCCTCACTaGCCGTCCAGCCGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: FQTPTVRSQYRGLSFPQSHCLPH*PSSRCH
Trigger: ATGGCAGCGGCTGGACGGGCAGTGAGGAAGGCAGTG...GGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp ATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTGAGAACTCTACCAGCTaGAACCGGGCGGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: IGVYPFLSPSLFSSPTKFENSTS*NRAVPR
Trigger: CCTGGGCACCGCCCGGTTGCAGCTGGTAGAGTTCTC...AAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp CAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCAGTGCTGGCTGATGTaGACGAACAGGTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: QTPTVRSQYRGLSFPQSQQCWLM*TNRCLW
Trigger: CCAGAGGCACCTGTTCGTGCACATCAGCCAGCACTG...CTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp CTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTGGCGGTACACAAATCTaGCGTCCTCCAGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LALLLHRKGSSSLCDLTGGGTQI*RPPAGP
Trigger: GGGCCCAGCTGGAGGACGGCAGATTTGTGTACCGCC...ACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp AATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGGCGCTCTCCAAGACATaGAGAGGAGTGGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: NIGVYPFLSPSLFSSPTKALSKT*RGVGVA
Trigger: GGCCACCCCCACTCCTCTGCATGTCTTGGAGAGCGC...CTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGGGGCCCACCTGGCTCTaGTCCTGCACAGAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: QPLYITALSPNKKHEVSWGPTWL*SCTERV
Trigger: AACCCTTTCTGTGCAGGAGCAGAGCCAGGTGGGCCC...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp CGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGCCCACCTGGCTCTaGTCCTGCACAGAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: RGLSFPQSQPVQLSNQVLGPTWL*SCTERV
Trigger: AACCCTTTCTGTGCAGGAGCAGAGCCAGGTGGGCCC...CAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp ACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGGGGCCCACCTGGCTCTaGTCCTGCACAGAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: TVRSQYRGLSFPQSQPVQGPTWL*SCTERV
Trigger: AACCCTTTCTGTGCAGGAGCAGAGCCAGGTGGGCCC...CTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp GTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAAGGGCCCACCTGGCTCTaGTCCTGCACAGAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: VPISGFILSSVPACSALQGPTWL*SCTERV
Trigger: AACCCTTTCTGTGCAGGAGCAGAGCCAGGTGGGCCC...TTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp ATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTGGCGCGGAGATGAGCTaGGCAGAGGACATGGTTGCC +
Preference number: 4 (lower is better)
Translates to: IGVYPFLSPSLFSSPTKFGAEMS*AEDMVA
Trigger: GGCAACCATGTCCTCTGCCCAGCTCATCTCCGCGCC...AAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp TCAACACACTGCTTGTGCAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTATCCAGGTACTCGCACATaGGCGAGCGCAGCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: STHCLCSGDKVKTLAPTYPGTRT*ASAAGG
Trigger: ACCGCCTGCTGCGCTCGCCCATGTGCGAGTACCTGG...ATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp GAAGGAAACCGTCTAGCTCAGGGCTCACTTAGGAGAGGGATGAGATTAGAAAGTCCAGGTACTCGCACATaGGCGAGCGCAGCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: EGNRLAQGSLRRGMRLESPGTRT*ASAAGG
Trigger: ACCGCCTGCTGCGCTCGCCCATGTGCGAGTACCTGG...ACTTTCTAATCTCATCCCTCTCCTAAGTGAGCCCTGAGCTAGACGGTTTCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGACCAGGTACTCGCACATaGGCGAGCGCAGCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: LLLHRKGSSSLCDLTGHGPGTRT*ASAAGG
Trigger: ACCGCCTGCTGCGCTCGCCCATGTGCGAGTACCTGG...TCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp TGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGAGCCAGGTACTCGCACATaGGCGAGCGCAGCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: CSCTERVHLHFVISQVMEPGTRT*ASAAGG
Trigger: ACCGCCTGCTGCGCTCGCCCATGTGCGAGTACCTGG...CTCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGCCCCACGCTCGCTGGTaGAGACCTCGAAGACATAGG +
Preference number: 4 (lower is better)
Translates to: RGLSFPQSQPVQLSNQVLPHARW*RPRRHR
Trigger: CCTATGTCTTCGAGGTCTCCACCAGCGAGCGTGGGG...CAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGCCCCACGCTCGCTGGTaGAGACCTCGAAGACATAGG +
Preference number: 4 (lower is better)
Translates to: QPLYITALSPNKKHEVSWPHARW*RPRRHR
Trigger: CCTATGTCTTCGAGGTCTCCACCAGCGAGCGTGGGG...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp ACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCCCCACGCTCGCTGGTaGAGACCTCGAAGACATAGG +
Preference number: 4 (lower is better)
Translates to: TVRSQYRGLSFPQSQPVQPHARW*RPRRHR
Trigger: CCTATGTCTTCGAGGTCTCCACCAGCGAGCGTGGGG...CTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTGGGCCCCACGCTCGCTaGTGGAGACCTCGAAGACAT +
Preference number: 4 (lower is better)
Translates to: LALLLHRKGSSSLCDLTGGPHAR*WRPRRH
Trigger: ATGTCTTCGAGGTCTCCACCAGCGAGCGTGGGGCCC...ACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp TTTCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCGGGCCCCACGCTCGCTaGTGGAGACCTCGAAGACAT +
Preference number: 4 (lower is better)
Translates to: FQTPTVRSQYRGLSFPQSGPHAR*WRPRRH
Trigger: ATGTCTTCGAGGTCTCCACCAGCGAGCGTGGGGCCC...GGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp ACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGGGGAGGAGGGTGTTCTaGGGGGTGAGCCAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: TVRSQYRGLSFPQSQPVQGRRVF*GVSQFW
Trigger: CCAAAACTGGCTCACCCCCCAGAACACCCTCCTCCC...CTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp GTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAAGGGAGGAGGGTGTTCTaGGGGGTGAGCCAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: VPISGFILSSVPACSALQGRRVF*GVSQFW
Trigger: CCAAAACTGGCTCACCCCCCAGAACACCCTCCTCCC...TTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp GGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGAGGAGGGTGTTCTaGGGGGTGAGCCAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: GVYPFLSPSLFSSPTKFWGRRVF*GVSQFW
Trigger: CCAAAACTGGCTCACCCCCCAGAACACCCTCCTCCC...CCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp TCAACACACTGCTTGTGCAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTATCTGGAGGACCCTCCCTaGGAGGAGGGTGTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: STHCLCSGDKVKTLAPTYLEDPP*EEGVLG
Trigger: CCCCAGAACACCCTCCTCCCAGGGAGGGTCCTCCAG...ATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp GGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGAAGCATGAGGTGAGCTaGAGGACCCTCCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GVYPFLSPSLFSSPTKFWKHEVS*RTLPGR
Trigger: CCTCCCAGGGAGGGTCCTCCAGCTCACCTCATGCTT...CCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp TCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAAAGCATGAGGTGAGCTaGAGGACCCTCCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SDTHCEVPISGFILSSVPKHEVS*RTLPGR
Trigger: CCTCCCAGGGAGGGTCCTCCAGCTCACCTCATGCTT...TGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp TTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCAAGCATGAGGTGAGCTaGAGGACCCTCCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: FILSSVPACSALQPSFGGKHEVS*RTLPGR
Trigger: CCTCCCAGGGAGGGTCCTCCAGCTCACCTCATGCTT...GCCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAAGCATGAGGTGAGCTaGAGGACCCTCCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: QPLYITALSPNKKHEVSWKHEVS*RTLPGR
Trigger: CCTCCCAGGGAGGGTCCTCCAGCTCACCTCATGCTT...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp GAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCAGCCAGTGCTGTACCTaGGGGGTTGTCTCACTCCTG +
Preference number: 4 (lower is better)
Translates to: EVPISGFILSSVPACSALSQCCT*GVVSLL
Trigger: CAGGAGTGAGACAACCCCCCAGGTACAGCACTGGCT...GAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp TACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGACCCTCAGCCAGTGCTGTACCTaGGGGGTTGTCTCACTCCTG +
Preference number: 4 (lower is better)
Translates to: YITALSPNKKHEVSWRTLSQCCT*GVVSLL
Trigger: CAGGAGTGAGACAACCCCCCAGGTACAGCACTGGCT...GAGGGTCCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CCCACCTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCATGTCCAGGGCCCACCTaGCTCTGCTCCTGCACAGAA +
Preference number: 4 (lower is better)
Translates to: PTWLCSCTERVHLHFVISCPGPT*LCSCTE
Trigger: TTCTGTGCAGGAGCAGAGCCAGGTGGGCCCTGGACA...TGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp TTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCTGTCCAGGGCCCACCTaGCTCTGCTCCTGCACAGAA +
Preference number: 4 (lower is better)
Translates to: FILSSVPACSALQPSFGGCPGPT*LCSCTE
Trigger: TTCTGTGCAGGAGCAGAGCCAGGTGGGCCCTGGACA...GCCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGAGGGCTGGGACTCTaGACCACTGGGTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: QPLYITALSPNKKHEVSWRGLGL*TTGSEG
Trigger: TCCCTCAGACCCAGTGGTCCAGAGTCCCAGCCCTCT...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377214.8
CDS-3UTR CCA 90 bp GTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCCACCTGAGGACCAGTaGGACCCAGTTTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: VYPFLSPSLFSSPTKFWGPPEDQ*DPVWPA
Trigger: TGCAGGCCAAACTGGGTCCCACTGGTCCTCAGGTGG...CCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377214.8
ENST00000539846.5
ENST00000601519.5
CDS-3UTR CCA 90 bp TCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCACCACCTGAGGACCAGTaGGACCCAGTTTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SDTHCEVPISGFILSSVPPPEDQ*DPVWPA
Trigger: TGCAGGCCAAACTGGGTCCCACTGGTCCTCAGGTGG...TGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377214.8
ENST00000601519.5
CDS-3UTR TCA 90 bp TCAACACACTGCTTGTGCAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTATGAGAAGGCGCGGAGATaGGCTGGGCAGAGGACATGG +
Preference number: 4 (lower is better)
Translates to: STHCLCSGDKVKTLAPTYEKARR*AGQRTW
Trigger: CCATGTCCTCTGCCCAGCTCATCTCCGCGCCTTCTC...ATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp GTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGAAAAGCTCAGAGGCCTaGGGACCAGTGGGACCCAGT +
Preference number: 4 (lower is better)
Translates to: VYPFLSPSLFSSPTKFWGKSSEA*GPVGPS
Trigger: ACTGGGTCCCACTGGTCCTCAGGCCTCTGAGCTTTT...CCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311227.6
ENST00000593945.6
ENST00000598810.5
CDS-3UTR TCA 90 bp CAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGAGATGGGGGAGTCAGTaGCAAGGTGAACGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: QTPTVRSQYRGLSFPQSQRWGSQ*QGERCL
Trigger: CAGACACCGTTCACCTTGTCACTGACTCCCCCATCT...CTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp GAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCGGTTCCACGAAGGCTaGGAACTCTACCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: EVPISGFILSSVPACSALRFHEG*ELYQLQ
Trigger: TTGCAGCTGGTAGAGTTCTCAGCCTTCGTGGAACCG...GAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp TACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGACCCTCCGGTTCCACGAAGGCTaGGAACTCTACCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: YITALSPNKKHEVSWRTLRFHEG*ELYQLQ
Trigger: TTGCAGCTGGTAGAGTTCTCAGCCTTCGTGGAACCG...GAGGGTCCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CCCACCTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACCTTGGAGGAACAGGTaGGGGTCATGTGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PTWLCSCTERVHLHFVISPWRNR*GSCVPG
Trigger: GCCTGGAACACATGACCCTCACCTGTTCCTCCAAGG...TGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp GTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCTTGGAGGAACAGGTaGGGGTCATGTGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: VPISGFILSSVPACSALQPWRNR*GSCVPG
Trigger: GCCTGGAACACATGACCCTCACCTGTTCCTCCAAGG...TTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGCCTTGGAGGAACAGGTaGGGGTCATGTGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RGLSFPQSQPVQLSNQVLPWRNR*GSCVPG
Trigger: GCCTGGAACACATGACCCTCACCTGTTCCTCCAAGG...CAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGCCACCTGGAGGATGGTaGAGTTTTCCAGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: PLYITALSPNKKHEVSWRPPGGW*SFPGRC
Trigger: ACAGCGTCCTGGAAAACTTCACCATCCTCCAGGTGG...CCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp TACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGACCCTCCCACCTGGAGGATGGTaGAGTTTTCCAGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: YITALSPNKKHEVSWRTLPPGGW*SFPGRC
Trigger: ACAGCGTCCTGGAAAACTTCACCATCCTCCAGGTGG...GAGGGTCCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCTCCCCCTTCAGTCCCTaGCCAGGCGGTAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: PNIGVYPFLSPSLFSSPTSPFSP*PGGKCD
Trigger: ATCACATTTACCGCCTGGTCAGGGACTGAAGGGGGA...GGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TCAACACACTGCTTGTGCAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTATCACTGCCTTCCTCACTaGCCGTCCAGCCGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: STHCLCSGDKVKTLAPTYHCLPH*PSSRCH
Trigger: ATGGCAGCGGCTGGACGGGCAGTGAGGAAGGCAGTG...ATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp GCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATCGGTACCCTCCTCACTaGCTTCCTCACTGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: ALLLHRKGSSSLCDLTGHRYPPH*LPHCPS
Trigger: GGACGGGCAGTGAGGAAGGCAGTGAGGAGGGTACCG...ATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp GTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACAGTGCTGGCTGATGTaGACGAACAGGTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: VPISGFILSSVPACSALQQCWLM*TNRCLW
Trigger: CCAGAGGCACCTGTTCGTGCACATCAGCCAGCACTG...TTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCCAGTGCTGGCTGATGTaGACGAACAGGTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: FILSSVPACSALQPSFGGQCWLM*TNRCLW
Trigger: CCAGAGGCACCTGTTCGTGCACATCAGCCAGCACTG...GCCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCACAGTGCTGGCTGATGTaGACGAACAGGTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SDTHCEVPISGFILSSVPQCWLM*TNRCLW
Trigger: CCAGAGGCACCTGTTCGTGCACATCAGCCAGCACTG...TGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp GCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGCGGTACACAAATCTaGCGTCCTCCAGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: ALLLHRKGSSSLCDLTGHGGTQI*RPPAGP
Trigger: GGGCCCAGCTGGAGGACGGCAGATTTGTGTACCGCC...ATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TCAACACACTGCTTGTGCAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTATGGCGGTACACAAATCTaGCGTCCTCCAGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: STHCLCSGDKVKTLAPTYGGTQI*RPPAGP
Trigger: GGGCCCAGCTGGAGGACGGCAGATTTGTGTACCGCC...ATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGAGGGCGGTACACAAATCTaGCGTCCTCCAGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: CSCTERVHLHFVISQVMEGGTQI*RPPAGP
Trigger: GGGCCCAGCTGGAGGACGGCAGATTTGTGTACCGCC...CTCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGAGGCGCTCTCCAAGACATaGAGAGGAGTGGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: CSCTERVHLHFVISQVMEALSKT*RGVGVA
Trigger: GGCCACCCCCACTCCTCTGCATGTCTTGGAGAGCGC...CTCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp CTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGAGCGCTCTCCAAGACATaGAGAGGAGTGGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LLLHRKGSSSLCDLTGHGALSKT*RGVGVA
Trigger: GGCCACCCCCACTCCTCTGCATGTCTTGGAGAGCGC...TCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp GAAGGAAACCGTCTAGCTCAGGGCTCACTTAGGAGAGGGATGAGATTAGAAAGTCAGTGGGACCCAGTTTaGCCTGCAGAGAAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: EGNRLAQGSLRRGMRLESQWDPV*PAEKAR
Trigger: CCGCGCCTTCTCTGCAGGCCAAACTGGGTCCCACTG...ACTTTCTAATCTCATCCCTCTCCTAAGTGAGCCCTGAGCTAGACGGTTTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGATGCCTCCTCACCACTTaGGCCCCAGTTCAGGTCCGC +
Preference number: 4 (lower is better)
Translates to: LLLHRKGSSSLCDLTGHGCLLTT*APVQVR
Trigger: GCGGACCTGAACTGGGGCCCAAGTGGTGAGGAGGCA...TCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp GAAGGAAACCGTCTAGCTCAGGGCTCACTTAGGAGAGGGATGAGATTAGAAAGTGGGCCCCACGCTCGCTaGTGGAGACCTCGAAGACAT +
Preference number: 4 (lower is better)
Translates to: EGNRLAQGSLRRGMRLESGPHAR*WRPRRH
Trigger: ATGTCTTCGAGGTCTCCACCAGCGAGCGTGGGGCCC...ACTTTCTAATCTCATCCCTCTCCTAAGTGAGCCCTGAGCTAGACGGTTTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp GTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGAGCCAGTGCTGTACCTaGGGGGTTGTCTCACTCCTG +
Preference number: 4 (lower is better)
Translates to: VYPFLSPSLFSSPTKFWGSQCCT*GVVSLL
Trigger: CAGGAGTGAGACAACCCCCCAGGTACAGCACTGGCT...CCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp TCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAAGCCAGTGCTGTACCTaGGGGGTTGTCTCACTCCTG +
Preference number: 4 (lower is better)
Translates to: SDTHCEVPISGFILSSVPSQCCT*GVVSLL
Trigger: CAGGAGTGAGACAACCCCCCAGGTACAGCACTGGCT...TGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp TGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGAGAGACATGCAGAGGAGTaGGGGTGGCCTGTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: CSCTERVHLHFVISQVMERHAEE*GWPVRG
Trigger: GCCCCTGACAGGCCACCCCCACTCCTCTGCATGTCT...CTCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp GCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATAGACATGCAGAGGAGTaGGGGTGGCCTGTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: ALLLHRKGSSSLCDLTGHRHAEE*GWPVRG
Trigger: GCCCCTGACAGGCCACCCCCACTCCTCTGCATGTCT...ATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTTGTCCAGGGCCCACCTaGCTCTGCTCCTGCACAGAA +
Preference number: 4 (lower is better)
Translates to: LALLLHRKGSSSLCDLTGCPGPT*LCSCTE
Trigger: TTCTGTGCAGGAGCAGAGCCAGGTGGGCCCTGGACA...ACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp TCAACACACTGCTTGTGCAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTATGGAGGATCTGGGGCCTaGACTCCTGGGTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: STHCLCSGDKVKTLAPTYGGSGA*TPGSEG
Trigger: TCCCTCAGACCCAGGAGTCCAGGCCCCAGATCCTCC...ATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377214.8
CDS-3UTR TCA 90 bp GTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAATCCCCGTTCTCAGCTTaGTGTAGCGGGCGATCAGTT +
Preference number: 4 (lower is better)
Translates to: VPISGFILSSVPACSALQSPFSA*CSGRSV
Trigger: AACTGATCGCCCGCTACATCAAGCTGAGAACGGGGA...TTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp TTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCTCCCCGTTCTCAGCTTaGTGTAGCGGGCGATCAGTT +
Preference number: 4 (lower is better)
Translates to: FILSSVPACSALQPSFGGSPFSA*CSGRSV
Trigger: AACTGATCGCCCGCTACATCAAGCTGAGAACGGGGA...GCCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGGGTGAACGGTGTCTGTaGGAATGGCTTCACATCTGG +
Preference number: 4 (lower is better)
Translates to: QTPTVRSQYRGLSFPQSQGERCL*EWLHIW
Trigger: CCAGATGTGAAGCCATTCTCACAGACACCGTTCACC...CTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGAGATGGGGGAGTCAGTaGCAAGGTGAACGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: RGLSFPQSQPVQLSNQVLRWGSQ*QGERCL
Trigger: CAGACACCGTTCACCTTGTCACTGACTCCCCCATCT...CAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp GTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAAAGATGGGGGAGTCAGTaGCAAGGTGAACGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: VPISGFILSSVPACSALQRWGSQ*QGERCL
Trigger: CAGACACCGTTCACCTTGTCACTGACTCCCCCATCT...TTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGATGGGGGAGTCAGTaGCAAGGTGAACGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: QPLYITALSPNKKHEVSWRWGSQ*QGERCL
Trigger: CAGACACCGTTCACCTTGTCACTGACTCCCCCATCT...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGCGGTTCCACGAAGGCTaGGAACTCTACCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: QPLYITALSPNKKHEVSWRFHEG*ELYQLQ
Trigger: TTGCAGCTGGTAGAGTTCTCAGCCTTCGTGGAACCG...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGCCACCTGGAGGATGGTaGAGTTTTCCAGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: RGLSFPQSQPVQLSNQVLPPGGW*SFPGRC
Trigger: ACAGCGTCCTGGAAAACTTCACCATCCTCCAGGTGG...CAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CCCACCTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACCACCTGGAGGATGGTaGAGTTTTCCAGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: PTWLCSCTERVHLHFVISPPGGW*SFPGRC
Trigger: ACAGCGTCCTGGAAAACTTCACCATCCTCCAGGTGG...TGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp TTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCTCCCCCTTCAGTCCCTaGCCAGGCGGTAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: FILSSVPACSALQPSFGGSPFSP*PGGKCD
Trigger: ATCACATTTACCGCCTGGTCAGGGACTGAAGGGGGA...GCCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGTCCCCCTTCAGTCCCTaGCCAGGCGGTAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: QPLYITALSPNKKHEVSWSPFSP*PGGKCD
Trigger: ATCACATTTACCGCCTGGTCAGGGACTGAAGGGGGA...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCTGTCCCCACAATCCCTaGTACTCCGGAGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: PNIGVYPFLSPSLFSSPTCPHNP*YSGVIC
Trigger: ACAGATCACTCCGGAGTATCAGGGATTGTGGGGACA...GGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGTGGCCTGTCAGGGGCTaGAAAGAAAAGCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: QPLYITALSPNKKHEVSWWPVRG*KEKPVL
Trigger: CAGCACTGGCTTTTCTTTTCAGCCCCTGACAGGCCA...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGTGGCCTGTCAGGGGCTaGAAAGAAAAGCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: RGLSFPQSQPVQLSNQVLWPVRG*KEKPVL
Trigger: CAGCACTGGCTTTTCTTTTCAGCCCCTGACAGGCCA...CAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TTTCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGTGCTGGCTGATGTaGACGAACAGGTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: FQTPTVRSQYRGLSFPQSQCWLM*TNRCLW
Trigger: CCAGAGGCACCTGTTCGTGCACATCAGCCAGCACTG...GGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp GAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCGCTGGGCAGAGGACATaGTTGCCATTGTCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: EVPISGFILSSVPACSALAGQRT*LPLSGK
Trigger: CTTTCCAGACAATGGCAACCATGTCCTCTGCCCAGC...GAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCAGAGCAGCAGTTCCTaGGTGTCTCTGTTTGTCACC +
Preference number: 4 (lower is better)
Translates to: QTPTVRSQYRGLSFPQSQQSSSS*VSLFVT
Trigger: GGTGACAAACAGAGACACCCAGGAACTGCTGCTCTG...CTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGCAGAGCAGCAGTTCCTaGGTGTCTCTGTTTGTCACC +
Preference number: 4 (lower is better)
Translates to: PLYITALSPNKKHEVSWRQSSSS*VSLFVT
Trigger: GGTGACAAACAGAGACACCCAGGAACTGCTGCTCTG...CCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp GCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATCCCCACGCTCGCTGGTaGAGACCTCGAAGACATAGG +
Preference number: 4 (lower is better)
Translates to: ALLLHRKGSSSLCDLTGHPHARW*RPRRHR
Trigger: CCTATGTCTTCGAGGTCTCCACCAGCGAGCGTGGGG...ATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp TGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGAGCCCCACGCTCGCTGGTaGAGACCTCGAAGACATAGG +
Preference number: 4 (lower is better)
Translates to: CSCTERVHLHFVISQVMEPHARW*RPRRHR
Trigger: CCTATGTCTTCGAGGTCTCCACCAGCGAGCGTGGGG...CTCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp GAAGGAAACCGTCTAGCTCAGGGCTCACTTAGGAGAGGGATGAGATTAGAAAGTGGGAGGAGGGTGTTCTaGGGGGTGAGCCAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: EGNRLAQGSLRRGMRLESGRRVF*GVSQFW
Trigger: CCAAAACTGGCTCACCCCCCAGAACACCCTCCTCCC...ACTTTCTAATCTCATCCCTCTCCTAAGTGAGCCCTGAGCTAGACGGTTTCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGAGAAGGGGCTGGGGTCTaGACTCCTGAGTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LLLHRKGSSSLCDLTGHGEGAGV*TPESEG
Trigger: TCCCTCAGACTCAGGAGTCCAGACCCCAGCCCCTTC...TCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377214.8
CDS-3UTR CCA 90 bp CTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGACCACCTGAGGACCAGTaGGACCCAGTTTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LLLHRKGSSSLCDLTGHGPPEDQ*DPVWPA
Trigger: TGCAGGCCAAACTGGGTCCCACTGGTCCTCAGGTGG...TCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377214.8
ENST00000601519.5
CDS-3UTR TCA 90 bp TCAACACACTGCTTGTGCAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTATAAAAGCTCAGAGGCCTaGGGACCAGTGGGACCCAGT +
Preference number: 4 (lower is better)
Translates to: STHCLCSGDKVKTLAPTYKSSEA*GPVGPS
Trigger: ACTGGGTCCCACTGGTCCTCAGGCCTCTGAGCTTTT...ATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311227.6
ENST00000593945.6
ENST00000598810.5
CDS-3UTR TCA 90 bp ACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGGGTGAACGGTGTCTGTaGGAATGGCTTCACATCTGG +
Preference number: 4 (lower is better)
Translates to: TVRSQYRGLSFPQSQPVQGERCL*EWLHIW
Trigger: CCAGATGTGAAGCCATTCTCACAGACACCGTTCACC...CTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp GTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAAGGTGAACGGTGTCTGTaGGAATGGCTTCACATCTGG +
Preference number: 4 (lower is better)
Translates to: VPISGFILSSVPACSALQGERCL*EWLHIW
Trigger: CCAGATGTGAAGCCATTCTCACAGACACCGTTCACC...TTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp AATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGAGATGGGGGAGTCAGTaGCAAGGTGAACGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: NIGVYPFLSPSLFSSPTKRWGSQ*QGERCL
Trigger: CAGACACCGTTCACCTTGTCACTGACTCCCCCATCT...CTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCGGTTCCACGAAGGCTaGGAACTCTACCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LALLLHRKGSSSLCDLTGRFHEG*ELYQLQ
Trigger: TTGCAGCTGGTAGAGTTCTCAGCCTTCGTGGAACCG...ACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp TTTCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCGGTTCCACGAAGGCTaGGAACTCTACCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: FQTPTVRSQYRGLSFPQSRFHEG*ELYQLQ
Trigger: TTGCAGCTGGTAGAGTTCTCAGCCTTCGTGGAACCG...GGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp AATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGCCACCTGGAGGATGGTaGAGTTTTCCAGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: NIGVYPFLSPSLFSSPTKPPGGW*SFPGRC
Trigger: ACAGCGTCCTGGAAAACTTCACCATCCTCCAGGTGG...CTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp AATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTCCCCCTTCAGTCCCTaGCCAGGCGGTAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: NIGVYPFLSPSLFSSPTKSPFSP*PGGKCD
Trigger: ATCACATTTACCGCCTGGTCAGGGACTGAAGGGGGA...CTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp ATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTCCCCCTTCAGTCCCTaGCCAGGCGGTAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: IGVYPFLSPSLFSSPTKFSPFSP*PGGKCD
Trigger: ATCACATTTACCGCCTGGTCAGGGACTGAAGGGGGA...AAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp TACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGACCCTCAGTTGCTTAGGCCTCTaGGGTCAACCCCTTTACATC +
Preference number: 4 (lower is better)
Translates to: YITALSPNKKHEVSWRTLSCLGL*GQPLYI
Trigger: GATGTAAAGGGGTTGACCTCAGAGGCCTAAGCAACT...GAGGGTCCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp GGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGTTCAGACACCCACTGTaGGGTCCCAATATCGGGGTT +
Preference number: 4 (lower is better)
Translates to: GVYPFLSPSLFSSPTKFWFRHPL*GPNIGV
Trigger: AACCCCGATATTGGGACCTCACAGTGGGTGTCTGAA...CCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp GTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGTTCAGACACCCACTGTaGGGTCCCAATATCGGGGTT +
Preference number: 4 (lower is better)
Translates to: VYPFLSPSLFSSPTKFWGFRHPL*GPNIGV
Trigger: AACCCCGATATTGGGACCTCACAGTGGGTGTCTGAA...CCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CCCACCTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACCTGATACTCCGGAGTaGTCTGTCCTTTCAGACACC +
Preference number: 4 (lower is better)
Translates to: PTWLCSCTERVHLHFVISPDTPE*SVLSDT
Trigger: GGTGTCTGAAAGGACAGATCACTCCGGAGTATCAGG...TGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp GTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCCTGATACTCCGGAGTaGTCTGTCCTTTCAGACACC +
Preference number: 4 (lower is better)
Translates to: VYPFLSPSLFSSPTKFWGPDTPE*SVLSDT
Trigger: GGTGTCTGAAAGGACAGATCACTCCGGAGTATCAGG...CCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp TCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCACCTGATACTCCGGAGTaGTCTGTCCTTTCAGACACC +
Preference number: 4 (lower is better)
Translates to: SDTHCEVPISGFILSSVPPDTPE*SVLSDT
Trigger: GGTGTCTGAAAGGACAGATCACTCCGGAGTATCAGG...TGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp GTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCTGATACTCCGGAGTaGTCTGTCCTTTCAGACACC +
Preference number: 4 (lower is better)
Translates to: VPISGFILSSVPACSALQPDTPE*SVLSDT
Trigger: GGTGTCTGAAAGGACAGATCACTCCGGAGTATCAGG...TTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp GTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAATGTCCCCACAATCCCTaGTACTCCGGAGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: VPISGFILSSVPACSALQCPHNP*YSGVIC
Trigger: ACAGATCACTCCGGAGTATCAGGGATTGTGGGGACA...TTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp AATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTGGCCTGTCAGGGGCTaGAAAGAAAAGCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: NIGVYPFLSPSLFSSPTKWPVRG*KEKPVL
Trigger: CAGCACTGGCTTTTCTTTTCAGCCCCTGACAGGCCA...CTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp ATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGCCTGTCAGGGGCTaGAAAGAAAAGCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: IGVYPFLSPSLFSSPTKFWPVRG*KEKPVL
Trigger: CAGCACTGGCTTTTCTTTTCAGCCCCTGACAGGCCA...AAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGAGCAGTGCTGGCTGATGTaGACGAACAGGTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: CSCTERVHLHFVISQVMEQCWLM*TNRCLW
Trigger: CCAGAGGCACCTGTTCGTGCACATCAGCCAGCACTG...CTCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp CCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCTATCGCTCAGGCAGCTaGCGCAACTTGTGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: PNIGVYPFLSPSLFSSPTYRSGS*RNLCKK
Trigger: TTTCTTGCACAAGTTGCGGCAGCTGCCTGAGCGATA...GGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp GAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCACCTGGCTCTGCTCCTaGACAGAAAGGGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: EVPISGFILSSVPACSALTWLCS*TERVHL
Trigger: AAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAGGT...GAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGGCTGGGCAGAGGACATaGTTGCCATTGTCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: QPLYITALSPNKKHEVSWAGQRT*LPLSGK
Trigger: CTTTCCAGACAATGGCAACCATGTCCTCTGCCCAGC...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp GTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAAGCTGGGCAGAGGACATaGTTGCCATTGTCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: VPISGFILSSVPACSALQAGQRT*LPLSGK
Trigger: CTTTCCAGACAATGGCAACCATGTCCTCTGCCCAGC...TTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp ACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCAGAGCAGCAGTTCCTaGGTGTCTCTGTTTGTCACC +
Preference number: 4 (lower is better)
Translates to: TVRSQYRGLSFPQSQPVQQSSSS*VSLFVT
Trigger: GGTGACAAACAGAGACACCCAGGAACTGCTGCTCTG...CTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CCCACCTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGAGCAGCAGTTCCTaGGTGTCTCTGTTTGTCACC +
Preference number: 4 (lower is better)
Translates to: PTWLCSCTERVHLHFVISQSSSS*VSLFVT
Trigger: GGTGACAAACAGAGACACCCAGGAACTGCTGCTCTG...TGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp TTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCCAGAGCAGCAGTTCCTaGGTGTCTCTGTTTGTCACC +
Preference number: 4 (lower is better)
Translates to: FILSSVPACSALQPSFGGQSSSS*VSLFVT
Trigger: GGTGACAAACAGAGACACCCAGGAACTGCTGCTCTG...GCCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGAAGCCAGTGCTGTACCTaGGGGGTTGTCTCACTCCTG +
Preference number: 4 (lower is better)
Translates to: LLLHRKGSSSLCDLTGHGSQCCT*GVVSLL
Trigger: CAGGAGTGAGACAACCCCCCAGGTACAGCACTGGCT...TCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCGGAAAGCCTTGTCCTTaGAAACCTGGTCCACGTTCA +
Preference number: 4 (lower is better)
Translates to: PNIGVYPFLSPSLFSSPTGKPCP*KPGPRS
Trigger: TGAACGTGGACCAGGTTTCCAAGGACAAGGCTTTCC...GGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
CDS-3UTR TCA 90 bp GCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATTCCCCGTTCTCAGCTTaGTGTAGCGGGCGATCAGTT +
Preference number: 4 (lower is better)
Translates to: ALLLHRKGSSSLCDLTGHSPFSA*CSGRSV
Trigger: AACTGATCGCCCGCTACATCAAGCTGAGAACGGGGA...ATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGATCCCCGTTCTCAGCTTaGTGTAGCGGGCGATCAGTT +
Preference number: 4 (lower is better)
Translates to: LLLHRKGSSSLCDLTGHGSPFSA*CSGRSV
Trigger: AACTGATCGCCCGCTACATCAAGCTGAGAACGGGGA...TCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CCCACCTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCAGGACTGGATTTCCCTTaGTTTCCTTCGGGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: PTWLCSCTERVHLHFVISGLDFP*FPSGQN
Trigger: GTTTTGGCCCGAAGGAAATCAAGGGAAATCCAGTCC...TGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGGGACTGGATTTCCCTTaGTTTCCTTCGGGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: QPLYITALSPNKKHEVSWGLDFP*FPSGQN
Trigger: GTTTTGGCCCGAAGGAAATCAAGGGAAATCCAGTCC...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp GGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGACTGGATTTCCCTTaGTTTCCTTCGGGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: GVYPFLSPSLFSSPTKFWGLDFP*FPSGQN
Trigger: GTTTTGGCCCGAAGGAAATCAAGGGAAATCCAGTCC...CCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp TTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCGGACTGGATTTCCCTTaGTTTCCTTCGGGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: FILSSVPACSALQPSFGGGLDFP*FPSGQN
Trigger: GTTTTGGCCCGAAGGAAATCAAGGGAAATCCAGTCC...GCCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp GTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGGGACTGGATTTCCCTTaGTTTCCTTCGGGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: VYPFLSPSLFSSPTKFWGGLDFP*FPSGQN
Trigger: GTTTTGGCCCGAAGGAAATCAAGGGAAATCCAGTCC...CCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAAC
51% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTGGTGAACGGTGTCTGTaGGAATGGCTTCACATCTGG +
Preference number: 4 (lower is better)
Translates to: LALLLHRKGSSSLCDLTGGERCL*EWLHIW
Trigger: CCAGATGTGAAGCCATTCTCACAGACACCGTTCACC...ACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp TCAACACACTGCTTGTGCAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTATAGATGGGGGAGTCAGTaGCAAGGTGAACGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: STHCLCSGDKVKTLAPTYRWGSQ*QGERCL
Trigger: CAGACACCGTTCACCTTGTCACTGACTCCCCCATCT...ATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGACCACCTGGAGGATGGTaGAGTTTTCCAGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: LLLHRKGSSSLCDLTGHGPPGGW*SFPGRC
Trigger: ACAGCGTCCTGGAAAACTTCACCATCCTCCAGGTGG...TCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp TCAACACACTGCTTGTGCAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTATTCCCCCTTCAGTCCCTaGCCAGGCGGTAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: STHCLCSGDKVKTLAPTYSPFSP*PGGKCD
Trigger: ATCACATTTACCGCCTGGTCAGGGACTGAAGGGGGA...ATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGAGTTGCTTAGGCCTCTaGGGTCAACCCCTTTACATC +
Preference number: 4 (lower is better)
Translates to: RGLSFPQSQPVQLSNQVLSCLGL*GQPLYI
Trigger: GATGTAAAGGGGTTGACCTCAGAGGCCTAAGCAACT...CAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp AATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTCAGACACCCACTGTaGGGTCCCAATATCGGGGTT +
Preference number: 4 (lower is better)
Translates to: NIGVYPFLSPSLFSSPTKFRHPL*GPNIGV
Trigger: AACCCCGATATTGGGACCTCACAGTGGGTGTCTGAA...CTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp ATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTCCTGATACTCCGGAGTaGTCTGTCCTTTCAGACACC +
Preference number: 4 (lower is better)
Translates to: IGVYPFLSPSLFSSPTKFPDTPE*SVLSDT
Trigger: GGTGTCTGAAAGGACAGATCACTCCGGAGTATCAGG...AAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp TTTCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCTGTCCCCACAATCCCTaGTACTCCGGAGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: FQTPTVRSQYRGLSFPQSCPHNP*YSGVIC
Trigger: ACAGATCACTCCGGAGTATCAGGGATTGTGGGGACA...GGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TTTCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCTGCGAGGGAGAAAGTTaGCGGGAGCTTTGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: FQTPTVRSQYRGLSFPQSCEGES*RELCLG
Trigger: TCCCAAACAAAGCTCCCGGCAACTTTCTCCCTCGCA...GGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311227.6
CDS-3UTR GCA 90 bp CCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCCTGGTAAGAATCAACTaGATCTGGCGGTTCCACGAA +
Preference number: 4 (lower is better)
Translates to: PNIGVYPFLSPSLFSSPTLVRIN*IWRFHE
Trigger: TTCGTGGAACCGCCAGATGCAGTTGATTCTTACCAG...GGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp GAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCTGGTAAGAATCAACTaGATCTGGCGGTTCCACGAA +
Preference number: 4 (lower is better)
Translates to: EVPISGFILSSVPACSALLVRIN*IWRFHE
Trigger: TTCGTGGAACCGCCAGATGCAGTTGATTCTTACCAG...GAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp CCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGAGCTGCCGCAACTTGTaGAAGAAATTCACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: PLYITALSPNKKHEVSWRSCRNL*KKFTRY
Trigger: GTACCTGGTGAATTTCTTGCACAAGTTGCGGCAGCT...CCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp CCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAGCTGCCGCAACTTGTaGAAGAAATTCACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: PNIGVYPFLSPSLFSSPTSCRNL*KKFTRY
Trigger: GTACCTGGTGAATTTCTTGCACAAGTTGCGGCAGCT...GGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGTATCGCTCAGGCAGCTaGCGCAACTTGTGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: QPLYITALSPNKKHEVSWYRSGS*RNLCKK
Trigger: TTTCTTGCACAAGTTGCGGCAGCTGCCTGAGCGATA...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp ACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGTATCGCTCAGGCAGCTaGCGCAACTTGTGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: TVRSQYRGLSFPQSQPVQYRSGS*RNLCKK
Trigger: TTTCTTGCACAAGTTGCGGCAGCTGCCTGAGCGATA...CTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCTATCGCTCAGGCAGCTaGCGCAACTTGTGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: FILSSVPACSALQPSFGGYRSGS*RNLCKK
Trigger: TTTCTTGCACAAGTTGCGGCAGCTGCCTGAGCGATA...GCCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp GGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGTATCGCTCAGGCAGCTaGCGCAACTTGTGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: GVYPFLSPSLFSSPTKFWYRSGS*RNLCKK
Trigger: TTTCTTGCACAAGTTGCGGCAGCTGCCTGAGCGATA...CCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp GTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGACCTGGCTCTGCTCCTaGACAGAAAGGGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: VYPFLSPSLFSSPTKFWGTWLCS*TERVHL
Trigger: AAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAGGT...CCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp CCCACCTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCAACCTGGCTCTGCTCCTaGACAGAAAGGGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: PTWLCSCTERVHLHFVISTWLCS*TERVHL
Trigger: AAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAGGT...TGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGTTGTCCTTGGAAACCTaGTCCTTCAACTTGGACTGG +
Preference number: 4 (lower is better)
Translates to: PLYITALSPNKKHEVSWRLSLET*SFNLDW
Trigger: CCAGTCCAAGTTGAAGGACCAGGTTTCCAAGGACAA...CCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000601519.5
CDS-3UTR CCA 90 bp CCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCGGAAAGCCTTGTCCTTaGAAACCTGGTCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: PNIGVYPFLSPSLFSSPTGKPCP*KPGPST
Trigger: AGTTGAAGGACCAGGTTTCCAAGGACAAGGCTTTCC...GGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000601519.5
CDS-3UTR CCA 90 bp ATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTGCTGGGCAGAGGACATaGTTGCCATTGTCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: IGVYPFLSPSLFSSPTKFAGQRT*LPLSGK
Trigger: CTTTCCAGACAATGGCAACCATGTCCTCTGCCCAGC...AAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp AATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGGCTGGGCAGAGGACATaGTTGCCATTGTCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: NIGVYPFLSPSLFSSPTKAGQRT*LPLSGK
Trigger: CTTTCCAGACAATGGCAACCATGTCCTCTGCCCAGC...CTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp ATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTCAGAGCAGCAGTTCCTaGGTGTCTCTGTTTGTCACC +
Preference number: 4 (lower is better)
Translates to: IGVYPFLSPSLFSSPTKFQSSSS*VSLFVT
Trigger: GGTGACAAACAGAGACACCCAGGAACTGCTGCTCTG...AAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp AATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGCCTCCAGACCAAAACTaGAAAAGCTCAGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: NIGVYPFLSPSLFSSPTKPPDQN*KSSEAW
Trigger: CCAGGCCTCTGAGCTTTTCCAGTTTTGGTCTGGAGG...CTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377214.8
ENST00000539846.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGGGAAAGCCTTGTCCTTaGAAACCTGGTCCACGTTCA +
Preference number: 4 (lower is better)
Translates to: QPLYITALSPNKKHEVSWGKPCP*KPGPRS
Trigger: TGAACGTGGACCAGGTTTCCAAGGACAAGGCTTTCC...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
CDS-3UTR TCA 90 bp GAAGGAAACCGTCTAGCTCAGGGCTCACTTAGGAGAGGGATGAGATTAGAAAGTGGTGAACGGTGTCTGTaGGAATGGCTTCACATCTGG +
Preference number: 4 (lower is better)
Translates to: EGNRLAQGSLRRGMRLESGERCL*EWLHIW
Trigger: CCAGATGTGAAGCCATTCTCACAGACACCGTTCACC...ACTTTCTAATCTCATCCCTCTCCTAAGTGAGCCCTGAGCTAGACGGTTTCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp TTTCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCGAGTCAGTGACAAGGTaGACGGTGTCTGTGAGAATG +
Preference number: 4 (lower is better)
Translates to: FQTPTVRSQYRGLSFPQSESVTR*TVSVRM
Trigger: CATTCTCACAGACACCGTTCACCTTGTCACTGACTC...GGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp AATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGGAGTCAGTGACAAGGTaGACGGTGTCTGTGAGAATG +
Preference number: 4 (lower is better)
Translates to: NIGVYPFLSPSLFSSPTKESVTR*TVSVRM
Trigger: CATTCTCACAGACACCGTTCACCTTGTCACTGACTC...CTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp ATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTGAGTCAGTGACAAGGTaGACGGTGTCTGTGAGAATG +
Preference number: 4 (lower is better)
Translates to: IGVYPFLSPSLFSSPTKFESVTR*TVSVRM
Trigger: CATTCTCACAGACACCGTTCACCTTGTCACTGACTC...AAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp TCAACACACTGCTTGTGCAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTATTTCAGACACCCACTGTaGGGTCCCAATATCGGGGTT +
Preference number: 4 (lower is better)
Translates to: STHCLCSGDKVKTLAPTYFRHPL*GPNIGV
Trigger: AACCCCGATATTGGGACCTCACAGTGGGTGTCTGAA...ATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp GAAGGAAACCGTCTAGCTCAGGGCTCACTTAGGAGAGGGATGAGATTAGAAAGTTTCAGACACCCACTGTaGGGTCCCAATATCGGGGTT +
Preference number: 4 (lower is better)
Translates to: EGNRLAQGSLRRGMRLESFRHPL*GPNIGV
Trigger: AACCCCGATATTGGGACCTCACAGTGGGTGTCTGAA...ACTTTCTAATCTCATCCCTCTCCTAAGTGAGCCCTGAGCTAGACGGTTTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCAAACAAACAAACTTTaGGAGGGGAGGAAGGAAACC +
Preference number: 4 (lower is better)
Translates to: QTPTVRSQYRGLSFPQSQQTNKL*EGRKET
Trigger: GGTTTCCTTCCTCCCCTCTCAAAGTTTGTTTGTTTG...CTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCACTGGTAAGAATCAACTaGATCTGGCGGTTCCACGAA +
Preference number: 4 (lower is better)
Translates to: SDTHCEVPISGFILSSVPLVRIN*IWRFHE
Trigger: TTCGTGGAACCGCCAGATGCAGTTGATTCTTACCAG...TGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGCTGGTAAGAATCAACTaGATCTGGCGGTTCCACGAA +
Preference number: 4 (lower is better)
Translates to: QPLYITALSPNKKHEVSWLVRIN*IWRFHE
Trigger: TTCGTGGAACCGCCAGATGCAGTTGATTCTTACCAG...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp GGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGAGCTGCCGCAACTTGTaGAAGAAATTCACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: GVYPFLSPSLFSSPTKFWSCRNL*KKFTRY
Trigger: GTACCTGGTGAATTTCTTGCACAAGTTGCGGCAGCT...CCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCAGCTGCCGCAACTTGTaGAAGAAATTCACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: FILSSVPACSALQPSFGGSCRNL*KKFTRY
Trigger: GTACCTGGTGAATTTCTTGCACAAGTTGCGGCAGCT...GCCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp CTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTACCTGGCTCTGCTCCTaGACAGAAAGGGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: LALLLHRKGSSSLCDLTGTWLCS*TERVHL
Trigger: AAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAGGT...ACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCCCTGGTCCTTCAACTTaGACTGGATTTCCCTTGATT +
Preference number: 4 (lower is better)
Translates to: PNIGVYPFLSPSLFSSPTPGPST*TGFPLI
Trigger: AATCAAGGGAAATCCAGTCCAAGTTGAAGGACCAGG...GGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000601519.5
CDS-3UTR CCA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGTTGTCCTTGGAAACCTaGTCCTTCAACTTGGACTGG +
Preference number: 4 (lower is better)
Translates to: QPLYITALSPNKKHEVSWLSLET*SFNLDW
Trigger: CCAGTCCAAGTTGAAGGACCAGGTTTCCAAGGACAA...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000601519.5
CDS-3UTR CCA 90 bp ACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGGGAAAGCCTTGTCCTTaGAAACCTGGTCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: TVRSQYRGLSFPQSQPVQGKPCP*KPGPST
Trigger: AGTTGAAGGACCAGGTTTCCAAGGACAAGGCTTTCC...CTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000601519.5
CDS-3UTR CCA 90 bp CCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGATGGTTGCCATTGTCTaGAAAGCCTTGTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: PLYITALSPNKKHEVSWRMVAIV*KALSLE
Trigger: TTCCAAGGACAAGGCTTTCCAGACAATGGCAACCAT...CCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp TGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGAGGCTGGGCAGAGGACATaGTTGCCATTGTCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: CSCTERVHLHFVISQVMEAGQRT*LPLSGK
Trigger: CTTTCCAGACAATGGCAACCATGTCCTCTGCCCAGC...CTCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp GCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATCCTCCAGACCAAAACTaGAAAAGCTCAGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ALLLHRKGSSSLCDLTGHPPDQN*KSSEAW
Trigger: CCAGGCCTCTGAGCTTTTCCAGTTTTGGTCTGGAGG...ATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377214.8
ENST00000601519.5
CDS-3UTR CCA 90 bp CTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGACCTCCAGACCAAAACTaGAAAAGCTCAGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLLHRKGSSSLCDLTGHGPPDQN*KSSEAW
Trigger: CCAGGCCTCTGAGCTTTTCCAGTTTTGGTCTGGAGG...TCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377214.8
ENST00000601519.5
CDS-3UTR CCA 90 bp ATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTGGAAAGCCTTGTCCTTaGAAACCTGGTCCACGTTCA +
Preference number: 4 (lower is better)
Translates to: IGVYPFLSPSLFSSPTKFGKPCP*KPGPRS
Trigger: TGAACGTGGACCAGGTTTCCAAGGACAAGGCTTTCC...AAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
CDS-3UTR TCA 90 bp TCAACACACTGCTTGTGCAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTATGGACTGGATTTCCCTTaGTTTCCTTCGGGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: STHCLCSGDKVKTLAPTYGLDFP*FPSGQN
Trigger: GTTTTGGCCCGAAGGAAATCAAGGGAAATCCAGTCC...ATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp GCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGAGTCAGTGACAAGGTaGACGGTGTCTGTGAGAATG +
Preference number: 4 (lower is better)
Translates to: ALLLHRKGSSSLCDLTGHESVTR*TVSVRM
Trigger: CATTCTCACAGACACCGTTCACCTTGTCACTGACTC...ATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp TCAACACACTGCTTGTGCAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTATGAGTCAGTGACAAGGTaGACGGTGTCTGTGAGAATG +
Preference number: 4 (lower is better)
Translates to: STHCLCSGDKVKTLAPTYESVTR*TVSVRM
Trigger: CATTCTCACAGACACCGTTCACCTTGTCACTGACTC...ATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGAAGTTGCTTAGGCCTCTaGGGTCAACCCCTTTACATC +
Preference number: 4 (lower is better)
Translates to: LLLHRKGSSSLCDLTGHGSCLGL*GQPLYI
Trigger: GATGTAAAGGGGTTGACCTCAGAGGCCTAAGCAACT...TCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp GAAGGAAACCGTCTAGCTCAGGGCTCACTTAGGAGAGGGATGAGATTAGAAAGTAGTTGCTTAGGCCTCTaGGGTCAACCCCTTTACATC +
Preference number: 4 (lower is better)
Translates to: EGNRLAQGSLRRGMRLESSCLGL*GQPLYI
Trigger: GATGTAAAGGGGTTGACCTCAGAGGCCTAAGCAACT...ACTTTCTAATCTCATCCCTCTCCTAAGTGAGCCCTGAGCTAGACGGTTTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp TTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCCAAACAAACAAACTTTaGGAGGGGAGGAAGGAAACC +
Preference number: 4 (lower is better)
Translates to: FILSSVPACSALQPSFGGQTNKL*EGRKET
Trigger: GGTTTCCTTCCTCCCCTCTCAAAGTTTGTTTGTTTG...GCCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGCAAACAAACAAACTTTaGGAGGGGAGGAAGGAAACC +
Preference number: 4 (lower is better)
Translates to: RGLSFPQSQPVQLSNQVLQTNKL*EGRKET
Trigger: GGTTTCCTTCCTCCCCTCTCAAAGTTTGTTTGTTTG...CAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp AATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGCTGGTAAGAATCAACTaGATCTGGCGGTTCCACGAA +
Preference number: 4 (lower is better)
Translates to: NIGVYPFLSPSLFSSPTKLVRIN*IWRFHE
Trigger: TTCGTGGAACCGCCAGATGCAGTTGATTCTTACCAG...CTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TCTGGTAAGAATCAACTGCATCTGGCGGTTCCACGAAGGCTGAGAACTCTACCACTGGTAAGAATCAACTaGATCTGGCGGTTCCACGAA +
Preference number: 4 (lower is better)
Translates to: SGKNQLHLAVPRRLRTLPLVRIN*IWRFHE
Trigger: TTCGTGGAACCGCCAGATGCAGTTGATTCTTACCAG...TGGTAGAGTTCTCAGCCTTCGTGGAACCGCCAGATGCAGTTGATTCTTACCAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598823.5
CDS-3UTR GCA 90 bp CTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTAGCTGCCGCAACTTGTaGAAGAAATTCACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: LALLLHRKGSSSLCDLTGSCRNL*KKFTRY
Trigger: GTACCTGGTGAATTTCTTGCACAAGTTGCGGCAGCT...ACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp CTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGATATCGCTCAGGCAGCTaGCGCAACTTGTGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: LLLHRKGSSSLCDLTGHGYRSGS*RNLCKK
Trigger: TTTCTTGCACAAGTTGCGGCAGCTGCCTGAGCGATA...TCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp CTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGAACCTGGCTCTGCTCCTaGACAGAAAGGGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: LLLHRKGSSSLCDLTGHGTWLCS*TERVHL
Trigger: AAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAGGT...TCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp CCCACCTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCATCAACACACTGCTTGTaGAGCGGAGATAAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: PTWLCSCTERVHLHFVISSTHCL*SGDKVK
Trigger: CTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA...TGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp GAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCGAAAGTTCAACACACTaGTTGTGCAGCGGAGATAAA +
Preference number: 4 (lower is better)
Translates to: EVPISGFILSSVPACSALESSTH*LCSGDK
Trigger: TTTATCTCCGCTGCACAAGCAGTGTGTTGAACTTTC...GAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp CCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGGAAAGTTCAACACACTaGTTGTGCAGCGGAGATAAA +
Preference number: 4 (lower is better)
Translates to: PLYITALSPNKKHEVSWRESSTH*LCSGDK
Trigger: TTTATCTCCGCTGCACAAGCAGTGTGTTGAACTTTC...CCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTGGAAAGCCTTGTCCTTaGAAACCTGGTCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: LALLLHRKGSSSLCDLTGGKPCP*KPGPST
Trigger: AGTTGAAGGACCAGGTTTCCAAGGACAAGGCTTTCC...ACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000601519.5
CDS-3UTR CCA 90 bp TTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCATGGTTGCCATTGTCTaGAAAGCCTTGTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: FILSSVPACSALQPSFGGMVAIV*KALSLE
Trigger: TTCCAAGGACAAGGCTTTCCAGACAATGGCAACCAT...GCCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGATGGTTGCCATTGTCTaGAAAGCCTTGTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: QPLYITALSPNKKHEVSWMVAIV*KALSLE
Trigger: TTCCAAGGACAAGGCTTTCCAGACAATGGCAACCAT...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGGCCTTCAACTTGGACTaGATTTCCCTTGATTTCCTT +
Preference number: 4 (lower is better)
Translates to: PLYITALSPNKKHEVSWRAFNLD*ISLDFL
Trigger: AAGGAAATCAAGGGAAATCCAGTCCAAGTTGAAGGC...CCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
CDS-3UTR TCA 90 bp AATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGGCCAAAACCTGGATGTaGCTAGAAACCTGTTTTCGA +
Preference number: 4 (lower is better)
Translates to: NIGVYPFLSPSLFSSPTKAKTWM*LETCFR
Trigger: TCGAAAACAGGTTTCTAGTCACATCCAGGTTTTGGC...CTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp GTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGTTCATCTTCACTTTGTaGTCTCACAGGTCATGGAGT +
Preference number: 4 (lower is better)
Translates to: VYPFLSPSLFSSPTKFWGFIFTL*SHRSWS
Trigger: ACTCCATGACCTGTGAGATCACAAAGTGAAGATGAA...CCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGTTCATCTTCACTTTGTaGTCTCACAGGTCATGGAGT +
Preference number: 4 (lower is better)
Translates to: QPLYITALSPNKKHEVSWFIFTL*SHRSWS
Trigger: ACTCCATGACCTGTGAGATCACAAAGTGAAGATGAA...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCAAACAAACAAACTTTaGGAGGGGAGGAAGGAAACC +
Preference number: 4 (lower is better)
Translates to: LALLLHRKGSSSLCDLTGQTNKL*EGRKET
Trigger: GGTTTCCTTCCTCCCCTCTCAAAGTTTGTTTGTTTG...ACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGAGCTGGTAAGAATCAACTaGATCTGGCGGTTCCACGAA +
Preference number: 4 (lower is better)
Translates to: CSCTERVHLHFVISQVMELVRIN*IWRFHE
Trigger: TTCGTGGAACCGCCAGATGCAGTTGATTCTTACCAG...CTCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp ATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTCAACACACTGCTTGTaGAGCGGAGATAAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: IGVYPFLSPSLFSSPTKFSTHCL*SGDKVK
Trigger: CTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA...AAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TTTCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCTCAACACACTGCTTGTaGAGCGGAGATAAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: FQTPTVRSQYRGLSFPQSSTHCL*SGDKVK
Trigger: CTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA...GGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp GTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAAGAAAGTTCAACACACTaGTTGTGCAGCGGAGATAAA +
Preference number: 4 (lower is better)
Translates to: VPISGFILSSVPACSALQESSTH*LCSGDK
Trigger: TTTATCTCCGCTGCACAAGCAGTGTGTTGAACTTTC...TTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCGAAAGTTCAACACACTaGTTGTGCAGCGGAGATAAA +
Preference number: 4 (lower is better)
Translates to: FILSSVPACSALQPSFGGESSTH*LCSGDK
Trigger: TTTATCTCCGCTGCACAAGCAGTGTGTTGAACTTTC...GCCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp AATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGCCTGGTCCTTCAACTTaGACTGGATTTCCCTTGATT +
Preference number: 4 (lower is better)
Translates to: NIGVYPFLSPSLFSSPTKPGPST*TGFPLI
Trigger: AATCAAGGGAAATCCAGTCCAAGTTGAAGGACCAGG...CTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000601519.5
CDS-3UTR CCA 90 bp TTTCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCATGGTTGCCATTGTCTaGAAAGCCTTGTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: FQTPTVRSQYRGLSFPQSMVAIV*KALSLE
Trigger: TTCCAAGGACAAGGCTTTCCAGACAATGGCAACCAT...GGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp AATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGATGGTTGCCATTGTCTaGAAAGCCTTGTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: NIGVYPFLSPSLFSSPTKMVAIV*KALSLE
Trigger: TTCCAAGGACAAGGCTTTCCAGACAATGGCAACCAT...CTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp CCCACCTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCAGCCTTCAACTTGGACTaGATTTCCCTTGATTTCCTT +
Preference number: 4 (lower is better)
Translates to: PTWLCSCTERVHLHFVISAFNLD*ISLDFL
Trigger: AAGGAAATCAAGGGAAATCCAGTCCAAGTTGAAGGC...TGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAGGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593945.6
ENST00000598810.5
CDS-3UTR CCA 90 bp CGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGCCTTCAACTTGGACTaGATTTCCCTTGATTTCCTT +
Preference number: 4 (lower is better)
Translates to: RGLSFPQSQPVQLSNQVLAFNLD*ISLDFL
Trigger: AAGGAAATCAAGGGAAATCCAGTCCAAGTTGAAGGC...CAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
CDS-3UTR TCA 90 bp ATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTTCATCTTCACTTTGTaGTCTCACAGGTCATGGAGT +
Preference number: 4 (lower is better)
Translates to: IGVYPFLSPSLFSSPTKFFIFTL*SHRSWS
Trigger: ACTCCATGACCTGTGAGATCACAAAGTGAAGATGAA...AAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp TCAACACACTGCTTGTGCAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTATCAAACAAACAAACTTTaGGAGGGGAGGAAGGAAACC +
Preference number: 4 (lower is better)
Translates to: STHCLCSGDKVKTLAPTYQTNKL*EGRKET
Trigger: GGTTTCCTTCCTCCCCTCTCAAAGTTTGTTTGTTTG...ATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGACCCTCTCCGACCATACATCTTaGCTTCATCAGACAAAATTA +
Preference number: 4 (lower is better)
Translates to: YITALSPNKKHEVSWRTLSDHTS*LHQTKL
Trigger: TAATTTTGTCTGATGAAGGCAAGATGTATGGTCGGA...GAGGGTCCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp CCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCTCCGACCATACATCTTaGCTTCATCAGACAAAATTA +
Preference number: 4 (lower is better)
Translates to: PNIGVYPFLSPSLFSSPTSDHTS*LHQTKL
Trigger: TAATTTTGTCTGATGAAGGCAAGATGTATGGTCGGA...GGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TTTCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCGAAAGTTCAACACACTaGTTGTGCAGCGGAGATAAA +
Preference number: 4 (lower is better)
Translates to: FQTPTVRSQYRGLSFPQSESSTH*LCSGDK
Trigger: TTTATCTCCGCTGCACAAGCAGTGTGTTGAACTTTC...GGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CCA 90 bp GCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATCCTGGTCCTTCAACTTaGACTGGATTTCCCTTGATT +
Preference number: 4 (lower is better)
Translates to: ALLLHRKGSSSLCDLTGHPGPST*TGFPLI
Trigger: AATCAAGGGAAATCCAGTCCAAGTTGAAGGACCAGG...ATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000601519.5
CDS-3UTR TCA 90 bp GAAGGAAACCGTCTAGCTCAGGGCTCACTTAGGAGAGGGATGAGATTAGAAAGTTTCATCTTCACTTTGTaGTCTCACAGGTCATGGAGT +
Preference number: 4 (lower is better)
Translates to: EGNRLAQGSLRRGMRLESFIFTL*SHRSWS
Trigger: ACTCCATGACCTGTGAGATCACAAAGTGAAGATGAA...ACTTTCTAATCTCATCCCTCTCCTAAGTGAGCCCTGAGCTAGACGGTTTCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR TCA 90 bp CTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGATTCATCTTCACTTTGTaGTCTCACAGGTCATGGAGT +
Preference number: 4 (lower is better)
Translates to: LLLHRKGSSSLCDLTGHGFIFTL*SHRSWS
Trigger: ACTCCATGACCTGTGAGATCACAAAGTGAAGATGAA...TCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCATCCGACCATACATCTTaGCTTCATCAGACAAAATTA +
Preference number: 4 (lower is better)
Translates to: SDTHCEVPISGFILSSVPSDHTS*LHQTKL
Trigger: TAATTTTGTCTGATGAAGGCAAGATGTATGGTCGGA...TGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp AATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTCCGACCATACATCTTaGCTTCATCAGACAAAATTA +
Preference number: 4 (lower is better)
Translates to: NIGVYPFLSPSLFSSPTKSDHTS*LHQTKL
Trigger: TAATTTTGTCTGATGAAGGCAAGATGTATGGTCGGA...CTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR GCA 90 bp TCAACACACTGCTTGTGCAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTATTCCGACCATACATCTTaGCTTCATCAGACAAAATTA +
Preference number: 4 (lower is better)
Translates to: STHCLCSGDKVKTLAPTYSDHTS*LHQTKL
Trigger: TAATTTTGTCTGATGAAGGCAAGATGTATGGTCGGA...ATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS GCA 90 bp CAGCCCCCTCACTGCCGCCGGTACCCTCCTCACTGCCTTCCTCACTaGCCGTCCAGCCGCTGCCATCGTCCAGGGCGGCCCCAGCCCGGG +
Preference number: 5 (lower is better)
Translates to: QPPHCRRYPPHCLPH*PSSRCHRPGRPQPG
Trigger: CCCGGGCTGGGGCCGCCCTGGACGATGGCAGCGGCTGGACGGGCAGTGAGGAAGGCAGTGAGGAGGGTACCGGCGGCAGTGAGGGGGCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp CCAGCTGCAACCGGGCGGTGCCCAGGCCCCGAGCCTGCCAGGCTGGGGGCGATGATTGTCTGGAAAGCCTaGTCCTTGGAAACCTGGTCC +
Preference number: 5 (lower is better)
Translates to: PAATGRCPGPEPARLGAMIVWKA*SLETWS
Trigger: GGACCAGGTTTCCAAGGACAAGGCTTTCCAGACAAT...CATCGCCCCCAGCCTGGCAGGCTCGGGGCCTGGGCACCGCCCGGTTGCAGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598823.5
CDS TCA 90 bp CCAGGCTCTCATACTGGCTGCTCACTCCGTAGAAGCCACCACTGCTaGTGCTGCCACCGGCCCCTGCCTCCTCACCACTTGGGCCCCAGT +
Preference number: 5 (lower is better)
Translates to: PGSHTGCSLRRSHHC*CCHRPLPPHHLGPS
Trigger: ACTGGGGCCCAAGTGGTGAGGAGGCAGGGGCCGGTGGCAGCATCAGCAGTGGTGGCTTCTACGGAGTGAGCAGCCAGTATGAGAGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS TCA 90 bp AGCCTGTGCTGCAGAATCAACTGCATCTGGCGGTTCCACGAAGGCTaGGAACTCTACCAGCTGCAACCGGGCGGTGCCCAGGCCCCGAGC +
Preference number: 5 (lower is better)
Translates to: SLCCRINCIWRFHEG*ELYQLQPGGAQAPS
Trigger: GCTCGGGGCCTGGGCACCGCCCGGTTGCAGCTGGTAGAGTTCTCAGCCTTCGTGGAACCGCCAGATGCAGTTGATTCTGCAGCACAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598397.1
CDS-3UTR CAA 90 bp AAGGCTGAGAACTCTACCAGCTGCAACCGGGCGGTGCCCAGGCCCCGAGCCTGCGGGCAGAGGACATGGTaGCCATTGTCTGGAAAGCCT +
Preference number: 5 (lower is better)
Translates to: KAENSTSCNRAVPRPRACGQRTW*PLSGKP
Trigger: AGGCTTTCCAGACAATGGCAACCATGTCCTCTGCCC...GCAGGCTCGGGGCCTGGGCACCGCCCGGTTGCAGCTGGTAGAGTTCTCAGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598823.5
CDS-3UTR CAA 90 bp TGTCGTAGATCTGCCGGACGTCCACACTCTCGAGCGGCGGCGCTCCGGGGCTGGAGGACATGGTTGCCATaGTCTGGAAAGCCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: CRRSAGRPHSRAAALRGWRTWLP*SGKPCP
Trigger: AGGACAAGGCTTTCCAGACAATGGCAACCATGTCCT...CCAGCCCCGGAGCGCCGCCGCTCGAGAGTGTGGACGTCCGGCAGATCTACGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598823.5
CDS TCA 90 bp GTGCACGAACAGGTGCCTCTGGTACTGAGGAGGGTTGGCCGTGGGTaGGAAGTCGGAGGTGAGCTGGATCTCCAGCCTGTGCTGCAGAAT +
Preference number: 5 (lower is better)
Translates to: VHEQVPLVLRRVGRG*EVGGELDLQPVLQN
Trigger: ATTCTGCAGCACAGGCTGGAGATCCAGCTCACCTCCGACTTCTCACCCACGGCCAACCCTCCTCAGTACCAGAGGCACCTGTTCGTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598397.1
CDS-3UTR CAA 90 bp CAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCTGCCTCCTCACCACTaGGGCCCCAGTTCAGGTCCG +
Preference number: 5 (lower is better)
Translates to: QTPTVRSQYRGLSFPQSQLPPHH*GPSSGP
Trigger: CGGACCTGAACTGGGGCCCAAGTGGTGAGGAGGCAG...CTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp GAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCTGCCTCCTCACCACTaGGGCCCCAGTTCAGGTCCG +
Preference number: 5 (lower is better)
Translates to: EVPISGFILSSVPACSALLPPHH*GPSSGP
Trigger: CGGACCTGAACTGGGGCCCAAGTGGTGAGGAGGCAG...GAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp CCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGCTGCCTCCTCACCACTaGGGCCCCAGTTCAGGTCCG +
Preference number: 5 (lower is better)
Translates to: PLYITALSPNKKHEVSWRLPPHH*GPSSGP
Trigger: CGGACCTGAACTGGGGCCCAAGTGGTGAGGAGGCAG...CCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp GTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCCAGTGGGACCCAGTTaGGCCTGCAGAGAAGGCGCG +
Preference number: 5 (lower is better)
Translates to: VYPFLSPSLFSSPTKFWGPVGPS*ACREGA
Trigger: CGCGCCTTCTCTGCAGGCCAAACTGGGTCCCACTGG...CCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp CCCACCTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACCAGTGGGACCCAGTTaGGCCTGCAGAGAAGGCGCG +
Preference number: 5 (lower is better)
Translates to: PTWLCSCTERVHLHFVISPVGPS*ACREGA
Trigger: CGCGCCTTCTCTGCAGGCCAAACTGGGTCCCACTGG...TGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGCTGCCTCCTCACCACTaGGGCCCCAGTTCAGGTCCG +
Preference number: 5 (lower is better)
Translates to: QPLYITALSPNKKHEVSWLPPHH*GPSSGP
Trigger: CGGACCTGAACTGGGGCCCAAGTGGTGAGGAGGCAG...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp GAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCGGGGGATGGCCCCAGTaGCTTAGGCCTCTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: EVPISGFILSSVPACSALGGWPQ*LRPLRS
Trigger: TGACCTCAGAGGCCTAAGCAACTGGGGCCATCCCCC...GAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp TCTGGTAAGAATCAACTGCATCTGGCGGTTCCACGAAGGCTGAGAACTCTACCACCAGTGGGACCCAGTTaGGCCTGCAGAGAAGGCGCG +
Preference number: 5 (lower is better)
Translates to: SGKNQLHLAVPRRLRTLPPVGPS*ACREGA
Trigger: CGCGCCTTCTCTGCAGGCCAAACTGGGTCCCACTGG...TGGTAGAGTTCTCAGCCTTCGTGGAACCGCCAGATGCAGTTGATTCTTACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598823.5
CDS-3UTR CAA 90 bp AATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGCTGCCTCCTCACCACTaGGGCCCCAGTTCAGGTCCG +
Preference number: 5 (lower is better)
Translates to: NIGVYPFLSPSLFSSPTKLPPHH*GPSSGP
Trigger: CGGACCTGAACTGGGGCCCAAGTGGTGAGGAGGCAG...CTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp TTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCGGGGGATGGCCCCAGTaGCTTAGGCCTCTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: FILSSVPACSALQPSFGGGGWPQ*LRPLRS
Trigger: TGACCTCAGAGGCCTAAGCAACTGGGGCCATCCCCC...GCCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp ACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGGGGGGATGGCCCCAGTaGCTTAGGCCTCTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: TVRSQYRGLSFPQSQPVQGGWPQ*LRPLRS
Trigger: TGACCTCAGAGGCCTAAGCAACTGGGGCCATCCCCC...CTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp GCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATCCAGTGGGACCCAGTTaGGCCTGCAGAGAAGGCGCG +
Preference number: 5 (lower is better)
Translates to: ALLLHRKGSSSLCDLTGHPVGPS*ACREGA
Trigger: CGCGCCTTCTCTGCAGGCCAAACTGGGTCCCACTGG...ATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp TCAACACACTGCTTGTGCAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTATCCAGTGGGACCCAGTTaGGCCTGCAGAGAAGGCGCG +
Preference number: 5 (lower is better)
Translates to: STHCLCSGDKVKTLAPTYPVGPS*ACREGA
Trigger: CGCGCCTTCTCTGCAGGCCAAACTGGGTCCCACTGG...ATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp GAAGGAAACCGTCTAGCTCAGGGCTCACTTAGGAGAGGGATGAGATTAGAAAGTCTGCCTCCTCACCACTaGGGCCCCAGTTCAGGTCCG +
Preference number: 5 (lower is better)
Translates to: EGNRLAQGSLRRGMRLESLPPHH*GPSSGP
Trigger: CGGACCTGAACTGGGGCCCAAGTGGTGAGGAGGCAG...ACTTTCTAATCTCATCCCTCTCCTAAGTGAGCCCTGAGCTAGACGGTTTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp TTTCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCGGGGGATGGCCCCAGTaGCTTAGGCCTCTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: FQTPTVRSQYRGLSFPQSGGWPQ*LRPLRS
Trigger: TGACCTCAGAGGCCTAAGCAACTGGGGCCATCCCCC...GGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp TACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGACCCTCCTCTCCAACCAAGTTTaGGGGGCCCCTCTAATGGGG +
Preference number: 5 (lower is better)
Translates to: YITALSPNKKHEVSWRTLLSNQV*GAPLMG
Trigger: CCCCATTAGAGGGGCCCCCAAAACTTGGTTGGAGAG...GAGGGTCCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp ACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCCACCCTCAAGGGACTaGAAGCTGAGAGGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: TVRSQYRGLSFPQSQPVQPPSRD*KLRGLG
Trigger: TCCCAGCCCTCTCAGCTTCAAGTCCCTTGAGGGTGG...CTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377214.8
CDS-3UTR CAA 90 bp CAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCAAAAGAGCAGACCTaGGAGGAACAGGTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: QTPTVRSQYRGLSFPQSQPKEQT*EEQVRV
Trigger: GACCCTCACCTGTTCCTCCAAGGTCTGCTCTTTTGG...CTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp CCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCCCAAAAGAGCAGACCTaGGAGGAACAGGTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: PNIGVYPFLSPSLFSSPTPKEQT*EEQVRV
Trigger: GACCCTCACCTGTTCCTCCAAGGTCTGCTCTTTTGG...GGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp GAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCGGCAGCTGCCGCAACTaGTGCAAGAAATTCACCAGG +
Preference number: 5 (lower is better)
Translates to: EVPISGFILSSVPACSALGSCRN*CKKFTR
Trigger: CCTGGTGAATTTCTTGCACAAGTTGCGGCAGCTGCC...GAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp GTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCTCTCCAACCAAGTTTaGGGGGCCCCTCTAATGGGG +
Preference number: 5 (lower is better)
Translates to: VYPFLSPSLFSSPTKFWGLSNQV*GAPLMG
Trigger: CCCCATTAGAGGGGCCCCCAAAACTTGGTTGGAGAG...CCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp CCCACCTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACTCTCCAACCAAGTTTaGGGGGCCCCTCTAATGGGG +
Preference number: 5 (lower is better)
Translates to: PTWLCSCTERVHLHFVISLSNQV*GAPLMG
Trigger: CCCCATTAGAGGGGCCCCCAAAACTTGGTTGGAGAG...TGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGCTCTCCAACCAAGTTTaGGGGGCCCCTCTAATGGGG +
Preference number: 5 (lower is better)
Translates to: QPLYITALSPNKKHEVSWLSNQV*GAPLMG
Trigger: CCCCATTAGAGGGGCCCCCAAAACTTGGTTGGAGAG...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp TTTCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCTGCGAGGGAGAAAGTaGCCGGGAGCTTTGTTTGGG +
Preference number: 5 (lower is better)
Translates to: FQTPTVRSQYRGLSFPQSLRGRK*PGALFG
Trigger: CCCAAACAAAGCTCCCGGCAACTTTCTCCCTCGCAG...GGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311227.6
CDS-3UTR CAA 90 bp GTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAAGGGCAGAGGACATGGTaGCCATTGTCTGGAAAGCCT +
Preference number: 5 (lower is better)
Translates to: VPISGFILSSVPACSALQGQRTW*PLSGKP
Trigger: AGGCTTTCCAGACAATGGCAACCATGTCCTCTGCCC...TTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp TCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGGGCAGAGGACATGGTaGCCATTGTCTGGAAAGCCT +
Preference number: 5 (lower is better)
Translates to: SDTHCEVPISGFILSSVPGQRTW*PLSGKP
Trigger: AGGCTTTCCAGACAATGGCAACCATGTCCTCTGCCC...TGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGCCAAAAGAGCAGACCTaGGAGGAACAGGTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: QPLYITALSPNKKHEVSWPKEQT*EEQVRV
Trigger: GACCCTCACCTGTTCCTCCAAGGTCTGCTCTTTTGG...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp GTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAAAGAGCAGACCTaGGAGGAACAGGTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: VPISGFILSSVPACSALQPKEQT*EEQVRV
Trigger: GACCCTCACCTGTTCCTCCAAGGTCTGCTCTTTTGG...TTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp TCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGGCAGCTGCCGCAACTaGTGCAAGAAATTCACCAGG +
Preference number: 5 (lower is better)
Translates to: SDTHCEVPISGFILSSVPGSCRN*CKKFTR
Trigger: CCTGGTGAATTTCTTGCACAAGTTGCGGCAGCTGCC...TGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp ACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGGGCAGCTGCCGCAACTaGTGCAAGAAATTCACCAGG +
Preference number: 5 (lower is better)
Translates to: TVRSQYRGLSFPQSQPVQGSCRN*CKKFTR
Trigger: CCTGGTGAATTTCTTGCACAAGTTGCGGCAGCTGCC...CTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp CAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGTGGAAAGCCTTGTCCTaGGAAACCTGGTCCTTCAAC +
Preference number: 5 (lower is better)
Translates to: QTPTVRSQYRGLSFPQSQWKALS*ETWSFN
Trigger: GTTGAAGGACCAGGTTTCCAAGGACAAGGCTTTCCA...CTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000601519.5
CDS-3UTR CAA 90 bp GAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCATTGTCTGGAAAGCCTaGTCCTTGGAAACCTGGTCC +
Preference number: 5 (lower is better)
Translates to: EVPISGFILSSVPACSALIVWKA*SLETWS
Trigger: GGACCAGGTTTCCAAGGACAAGGCTTTCCAGACAAT...GAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp TACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGACCCTCATTGTCTGGAAAGCCTaGTCCTTGGAAACCTGGTCC +
Preference number: 5 (lower is better)
Translates to: YITALSPNKKHEVSWRTLIVWKA*SLETWS
Trigger: GGACCAGGTTTCCAAGGACAAGGCTTTCCAGACAAT...GAGGGTCCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp CAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGAGGACATGGTTGCCATaGTCTGGAAAGCCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: QTPTVRSQYRGLSFPQSQRTWLP*SGKPCP
Trigger: AGGACAAGGCTTTCCAGACAATGGCAACCATGTCCT...CTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp AATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGGGGCAGAGGACATGGTaGCCATTGTCTGGAAAGCCT +
Preference number: 5 (lower is better)
Translates to: NIGVYPFLSPSLFSSPTKGQRTW*PLSGKP
Trigger: AGGCTTTCCAGACAATGGCAACCATGTCCTCTGCCC...CTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp TTTCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCCAAAAGAGCAGACCTaGGAGGAACAGGTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: FQTPTVRSQYRGLSFPQSPKEQT*EEQVRV
Trigger: GACCCTCACCTGTTCCTCCAAGGTCTGCTCTTTTGG...GGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp ATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTCCAAAAGAGCAGACCTaGGAGGAACAGGTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: IGVYPFLSPSLFSSPTKFPKEQT*EEQVRV
Trigger: GACCCTCACCTGTTCCTCCAAGGTCTGCTCTTTTGG...AAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp AATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGGGCAGCTGCCGCAACTaGTGCAAGAAATTCACCAGG +
Preference number: 5 (lower is better)
Translates to: NIGVYPFLSPSLFSSPTKGSCRN*CKKFTR
Trigger: CCTGGTGAATTTCTTGCACAAGTTGCGGCAGCTGCC...CTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp GCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATCTCTCCAACCAAGTTTaGGGGGCCCCTCTAATGGGG +
Preference number: 5 (lower is better)
Translates to: ALLLHRKGSSSLCDLTGHLSNQV*GAPLMG
Trigger: CCCCATTAGAGGGGCCCCCAAAACTTGGTTGGAGAG...ATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGTGGAAAGCCTTGTCCTaGGAAACCTGGTCCACGTTC +
Preference number: 5 (lower is better)
Translates to: QPLYITALSPNKKHEVSWWKALS*ETWSTF
Trigger: GAACGTGGACCAGGTTTCCAAGGACAAGGCTTTCCA...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
CDS-3UTR CAA 90 bp GAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCTGGACTGGATTTCCCTaGATTTCCTTCGGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: EVPISGFILSSVPACSALWTGFP*ISFGPK
Trigger: TTTTGGCCCGAAGGAAATCAAGGGAAATCCAGTCCA...GAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp TACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGACCCTCTGGACTGGATTTCCCTaGATTTCCTTCGGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: YITALSPNKKHEVSWRTLWTGFP*ISFGPK
Trigger: TTTTGGCCCGAAGGAAATCAAGGGAAATCCAGTCCA...GAGGGTCCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp CAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGACCTGGTCCTTCAACTaGGACTGGATTTCCCTTGAT +
Preference number: 5 (lower is better)
Translates to: QTPTVRSQYRGLSFPQSQTWSFN*DWISLD
Trigger: ATCAAGGGAAATCCAGTCCAAGTTGAAGGACCAGGT...CTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000601519.5
CDS-3UTR CAA 90 bp CGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGTGGAAAGCCTTGTCCTaGGAAACCTGGTCCTTCAAC +
Preference number: 5 (lower is better)
Translates to: RGLSFPQSQPVQLSNQVLWKALS*ETWSFN
Trigger: GTTGAAGGACCAGGTTTCCAAGGACAAGGCTTTCCA...CAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000601519.5
CDS-3UTR CAA 90 bp ACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGATTGTCTGGAAAGCCTaGTCCTTGGAAACCTGGTCC +
Preference number: 5 (lower is better)
Translates to: TVRSQYRGLSFPQSQPVQIVWKA*SLETWS
Trigger: GGACCAGGTTTCCAAGGACAAGGCTTTCCAGACAAT...CTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp TTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGCAGGACATGGTTGCCATaGTCTGGAAAGCCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: FILSSVPACSALQPSFGGRTWLP*SGKPCP
Trigger: AGGACAAGGCTTTCCAGACAATGGCAACCATGTCCT...GCCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp CAACCCCTTTACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGACATGGTTGCCATaGTCTGGAAAGCCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: QPLYITALSPNKKHEVSWRTWLP*SGKPCP
Trigger: AGGACAAGGCTTTCCAGACAATGGCAACCATGTCCT...CCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTAAAGGGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp GGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGAGGACATGGTTGCCATaGTCTGGAAAGCCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: GVYPFLSPSLFSSPTKFWRTWLP*SGKPCP
Trigger: AGGACAAGGCTTTCCAGACAATGGCAACCATGTCCT...CCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp GCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGGCAGAGGACATGGTaGCCATTGTCTGGAAAGCCT +
Preference number: 5 (lower is better)
Translates to: ALLLHRKGSSSLCDLTGHGQRTW*PLSGKP
Trigger: AGGCTTTCCAGACAATGGCAACCATGTCCTCTGCCC...ATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp CTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGAGGCAGCTGCCGCAACTaGTGCAAGAAATTCACCAGG +
Preference number: 5 (lower is better)
Translates to: LLLHRKGSSSLCDLTGHGGSCRN*CKKFTR
Trigger: CCTGGTGAATTTCTTGCACAAGTTGCGGCAGCTGCC...TCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp AATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTGGAAAGCCTTGTCCTaGGAAACCTGGTCCACGTTC +
Preference number: 5 (lower is better)
Translates to: NIGVYPFLSPSLFSSPTKWKALS*ETWSTF
Trigger: GAACGTGGACCAGGTTTCCAAGGACAAGGCTTTCCA...CTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
CDS-3UTR CAA 90 bp CCCACCTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCATGGACTGGATTTCCCTaGATTTCCTTCGGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: PTWLCSCTERVHLHFVISWTGFP*ISFGPK
Trigger: TTTTGGCCCGAAGGAAATCAAGGGAAATCCAGTCCA...TGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp GTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGTGGACTGGATTTCCCTaGATTTCCTTCGGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: VYPFLSPSLFSSPTKFWGWTGFP*ISFGPK
Trigger: TTTTGGCCCGAAGGAAATCAAGGGAAATCCAGTCCA...CCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp GGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGACCTGGTCCTTCAACTaGGACTGGATTTCCCTTGAT +
Preference number: 5 (lower is better)
Translates to: GVYPFLSPSLFSSPTKFWTWSFN*DWISLD
Trigger: ATCAAGGGAAATCCAGTCCAAGTTGAAGGACCAGGT...CCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000601519.5
CDS-3UTR CAA 90 bp TCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAACCTGGTCCTTCAACTaGGACTGGATTTCCCTTGAT +
Preference number: 5 (lower is better)
Translates to: SDTHCEVPISGFILSSVPTWSFN*DWISLD
Trigger: ATCAAGGGAAATCCAGTCCAAGTTGAAGGACCAGGT...TGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000601519.5
CDS-3UTR CAA 90 bp CTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTTGGAAAGCCTTGTCCTaGGAAACCTGGTCCTTCAAC +
Preference number: 5 (lower is better)
Translates to: LALLLHRKGSSSLCDLTGWKALS*ETWSFN
Trigger: GTTGAAGGACCAGGTTTCCAAGGACAAGGCTTTCCA...ACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000601519.5
CDS-3UTR CAA 90 bp CTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTATTGTCTGGAAAGCCTaGTCCTTGGAAACCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LALLLHRKGSSSLCDLTGIVWKA*SLETWS
Trigger: GGACCAGGTTTCCAAGGACAAGGCTTTCCAGACAAT...ACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp TTTCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCAGGACATGGTTGCCATaGTCTGGAAAGCCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: FQTPTVRSQYRGLSFPQSRTWLP*SGKPCP
Trigger: AGGACAAGGCTTTCCAGACAATGGCAACCATGTCCT...GGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp GTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGAGTTCAACACACTGCTaGTGCAGCGGAGATAAAGTC +
Preference number: 5 (lower is better)
Translates to: VYPFLSPSLFSSPTKFWGSSTHC*CSGDKV
Trigger: GACTTTATCTCCGCTGCACAAGCAGTGTGTTGAACT...CCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp GTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAAAGTTCAACACACTGCTaGTGCAGCGGAGATAAAGTC +
Preference number: 5 (lower is better)
Translates to: VPISGFILSSVPACSALQSSTHC*CSGDKV
Trigger: GACTTTATCTCCGCTGCACAAGCAGTGTGTTGAACT...TTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp CCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCTTCAGAGCCTTCAACTaGGACTGGATTTCCCTTGAT +
Preference number: 5 (lower is better)
Translates to: PNIGVYPFLSPSLFSSPTFRAFN*DWISLD
Trigger: ATCAAGGGAAATCCAGTCCAAGTTGAAGGCTCTGAA...GGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
CDS-3UTR CAA 90 bp TACATCACAGCCCTCTCCCCAAATAAGAAGCATGAGGTGAGCTGGAGGACCCTCTTCAGAGCCTTCAACTaGGACTGGATTTCCCTTGAT +
Preference number: 5 (lower is better)
Translates to: YITALSPNKKHEVSWRTLFRAFN*DWISLD
Trigger: ATCAAGGGAAATCCAGTCCAAGTTGAAGGCTCTGAA...GAGGGTCCTCCAGCTCACCTCATGCTTCTTATTTGGGGAGAGGGCTGTGATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
CDS-3UTR CAA 90 bp CTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGATGGAAAGCCTTGTCCTaGGAAACCTGGTCCACGTTC +
Preference number: 5 (lower is better)
Translates to: LLLHRKGSSSLCDLTGHGWKALS*ETWSTF
Trigger: GAACGTGGACCAGGTTTCCAAGGACAAGGCTTTCCA...TCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593945.6
ENST00000598810.5
CDS-3UTR CAA 90 bp TTTCAGACACCCACTGTGAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCTGGACTGGATTTCCCTaGATTTCCTTCGGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: FQTPTVRSQYRGLSFPQSWTGFP*ISFGPK
Trigger: TTTTGGCCCGAAGGAAATCAAGGGAAATCCAGTCCA...GGACTGAGGAAAGGATAAACCCCGATATTGGGACCTCACAGTGGGTGTCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp TCAACACACTGCTTGTGCAGCGGAGATAAAGTCAAGACCCTAGCACCCACTTATATTGTCTGGAAAGCCTaGTCCTTGGAAACCTGGTCC +
Preference number: 5 (lower is better)
Translates to: STHCLCSGDKVKTLAPTYIVWKA*SLETWS
Trigger: GGACCAGGTTTCCAAGGACAAGGCTTTCCAGACAAT...ATAAGTGGGTGCTAGGGTCTTGACTTTATCTCCGCTGCACAAGCAGTGTGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp GAAGGAAACCGTCTAGCTCAGGGCTCACTTAGGAGAGGGATGAGATTAGAAAGTAGGACATGGTTGCCATaGTCTGGAAAGCCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: EGNRLAQGSLRRGMRLESRTWLP*SGKPCP
Trigger: AGGACAAGGCTTTCCAGACAATGGCAACCATGTCCT...ACTTTCTAATCTCATCCCTCTCCTAAGTGAGCCCTGAGCTAGACGGTTTCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp ATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTAGTTCAACACACTGCTaGTGCAGCGGAGATAAAGTC +
Preference number: 5 (lower is better)
Translates to: IGVYPFLSPSLFSSPTKFSSTHC*CSGDKV
Trigger: GACTTTATCTCCGCTGCACAAGCAGTGTGTTGAACT...AAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp GTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTGGGGGTTCAGAGCCTTCAACTaGGACTGGATTTCCCTTGAT +
Preference number: 5 (lower is better)
Translates to: VYPFLSPSLFSSPTKFWGFRAFN*DWISLD
Trigger: ATCAAGGGAAATCCAGTCCAAGTTGAAGGCTCTGAA...CCCCCAAAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
CDS-3UTR CAA 90 bp GAGGTCCCAATATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCTTCCGACCATACATCTaGCCTTCATCAGACAAAATT +
Preference number: 5 (lower is better)
Translates to: EVPISGFILSSVPACSALFRPYI*PSSDKI
Trigger: AATTTTGTCTGATGAAGGCAAGATGTATGGTCGGAA...GAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGATATTGGGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp GCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATTGGACTGGATTTCCCTaGATTTCCTTCGGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: ALLLHRKGSSSLCDLTGHWTGFP*ISFGPK
Trigger: TTTTGGCCCGAAGGAAATCAAGGGAAATCCAGTCCA...ATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp CTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATGGAAGTTCAACACACTGCTaGTGCAGCGGAGATAAAGTC +
Preference number: 5 (lower is better)
Translates to: LLLHRKGSSSLCDLTGHGSSTHC*CSGDKV
Trigger: GACTTTATCTCCGCTGCACAAGCAGTGTGTTGAACT...TCCATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp GAAGGAAACCGTCTAGCTCAGGGCTCACTTAGGAGAGGGATGAGATTAGAAAGTAGTTCAACACACTGCTaGTGCAGCGGAGATAAAGTC +
Preference number: 5 (lower is better)
Translates to: EGNRLAQGSLRRGMRLESSSTHC*CSGDKV
Trigger: GACTTTATCTCCGCTGCACAAGCAGTGTGTTGAACT...ACTTTCTAATCTCATCCCTCTCCTAAGTGAGCCCTGAGCTAGACGGTTTCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp ATCGGGGTTTATCCTTTCCTCAGTCCCAGCCTGTTCAGCTCTCCAACCAAGTTTTTCCGACCATACATCTaGCCTTCATCAGACAAAATT +
Preference number: 5 (lower is better)
Translates to: IGVYPFLSPSLFSSPTKFFRPYI*PSSDKI
Trigger: AATTTTGTCTGATGAAGGCAAGATGTATGGTCGGAA...AAACTTGGTTGGAGAGCTGAACAGGCTGGGACTGAGGAAAGGATAAACCCCGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp CTGGCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTTTCCGACCATACATCTaGCCTTCATCAGACAAAATT +
Preference number: 5 (lower is better)
Translates to: LALLLHRKGSSSLCDLTGFRPYI*PSSDKI
Trigger: AATTTTGTCTGATGAAGGCAAGATGTATGGTCGGAA...ACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS-3UTR CAA 90 bp GCTCTGCTCCTGCACAGAAAGGGTTCATCTTCACTTTGTGATCTCACAGGTCATTTCCGACCATACATCTaGCCTTCATCAGACAAAATT +
Preference number: 5 (lower is better)
Translates to: ALLLHRKGSSSLCDLTGHFRPYI*PSSDKI
Trigger: AATTTTGTCTGATGAAGGCAAGATGTATGGTCGGAA...ATGACCTGTGAGATCACAAAGTGAAGATGAACCCTTTCTGTGCAGGAGCAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS GCA 72 bp CCTCCTCACTGCCTTCCTCACTGCCCGTCCAGCCGCTaGCATCGTCCAGGGCGGCCCCAGCCCGGGGTTCCC +
Preference number: 6 (lower is better)
Translates to: PPHCLPHCPSSR*HRPGRPQPGVP
Trigger: GGGAACCCCGGGCTGGGGCCGCCCTGGACGATGGCAGCGGCTGGACGGGCAGTGAGGAAGGCAGTGAGGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS GCA 72 bp CACTGCCGCCGGTACCCTCCTCACTGCCTTCCTCACTaGCCGTCCAGCCGCTGCCATCGTCCAGGGCGGCCC +
Preference number: 6 (lower is better)
Translates to: HCRRYPPHCLPH*PSSRCHRPGRP
Trigger: GGGCCGCCCTGGACGATGGCAGCGGCTGGACGGGCAGTGAGGAAGGCAGTGAGGAGGGTACCGGCGGCAGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS CCA 72 bp CGCAGCAGGCGGTACACAAATCTGCCGTCCTCCAGCTaGGCCCGTTCCGTCTCCACCTTCTCCACCACCTGC +
Preference number: 6 (lower is better)
Translates to: RSRRYTNLPSSS*ARSVSTFSTTC
Trigger: GCAGGTGGTGGAGAAGGTGGAGACGGAACGGGCCCAGCTGGAGGACGGCAGATTTGTGTACCGCCTGCTGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS TCA 72 bp CATACTGGCTGCTCACTCCGTAGAAGCCACCACTGCTaGTGCTGCCACCGGCCCCTGCCTCCTCACCACTTG +
Preference number: 6 (lower is better)
Translates to: HTGCSLRRSHHC*CCHRPLPPHHL
Trigger: CAAGTGGTGAGGAGGCAGGGGCCGGTGGCAGCATCAGCAGTGGTGGCTTCTACGGAGTGAGCAGCCAGTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
ENST00000601519.5
CDS TCA 72 bp CAGGTGCCTCTGGTACTGAGGAGGGTTGGCCGTGGGTaGGAAGTCGGAGGTGAGCTGGATCTCCAGCCTGTG +
Preference number: 6 (lower is better)
Translates to: QVPLVLRRVGRG*EVGGELDLQPV
Trigger: CACAGGCTGGAGATCCAGCTCACCTCCGACTTCTCACCCACGGCCAACCCTCCTCAGTACCAGAGGCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598397.1
CDS TCA 72 bp TGCAGAATCAACTGCATCTGGCGGTTCCACGAAGGCTaGGAACTCTACCAGCTGCAACCGGGCGGTGCCCAG +
Preference number: 6 (lower is better)
Translates to: CRINCIWRFHEG*ELYQLQPGGAQ
Trigger: CTGGGCACCGCCCGGTTGCAGCTGGTAGAGTTCTCAGCCTTCGTGGAACCGCCAGATGCAGTTGATTCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598397.1
CDS CCA 72 bp GAAACCTGGTCCACGTTCAGAGCCTTCAACTTGGACTaGATTTCCCTTGATTTCCTTCGGGCCAAAACCTGG +
Preference number: 6 (lower is better)
Translates to: ETWSTFRAFNLD*ISLDFLRAKTW
Trigger: CCAGGTTTTGGCCCGAAGGAAATCAAGGGAAATCCAGTCCAAGTTGAAGGCTCTGAACGTGGACCAGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
CDS CCA 72 bp GTTGCCATTGTCTGGAAAGCCTTGTCCTTGGAAACCTaGTCCACGTTCAGAGCCTTCAACTTGGACTGGATT +
Preference number: 6 (lower is better)
Translates to: VAIVWKALSLET*STFRAFNLDWI
Trigger: AATCCAGTCCAAGTTGAAGGCTCTGAACGTGGACCAGGTTTCCAAGGACAAGGCTTTCCAGACAATGGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5
CDS CAA 72 bp GAGGACATGGTTGCCATTGTCTGGAAAGCCTTGTCCTaGGAAACCTGGTCCTTCAACTTGGACTGGATTTCC +
Preference number: 6 (lower is better)
Translates to: EDMVAIVWKALS*ETWSFNLDWIS
Trigger: GGAAATCCAGTCCAAGTTGAAGGACCAGGTTTCCAAGGACAAGGCTTTCCAGACAATGGCAACCATGTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311227.6
ENST00000377214.8
ENST00000596757.1
ENST00000601519.5
CDS CAA 72 bp TCCTTGGAAACCTGGTCCACGTTCAGAGCCTTCAACTaGGACTGGATTTCCCTTGATTTCCTTCGGGCCAAA +
Preference number: 6 (lower is better)
Translates to: SLETWSTFRAFN*DWISLDFLRAK
Trigger: TTTGGCCCGAAGGAAATCAAGGGAAATCCAGTCCAAGTTGAAGGCTCTGAACGTGGACCAGGTTTCCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539846.5
ENST00000593945.6
ENST00000598810.5