RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TEAD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000187079

Ensembl transcript IDs: ENST00000334310.10, ENST00000525312.1, ENST00000526600.1, ENST00000527376.3, ENST00000527575.6, ENST00000527636.7

Found 727 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCAATGGTCGGACAGGACACTTCAGTGTGGGAAGCAGCATCCGGTaGGGCTGTGCTCTGGCACAGGGGGATCCTGAATCTCCCCATCTC +
Preference number: 1 (lower is better)
Translates to: SNGRTGHFSVGSSIR*GCALAQGDPESPHL
Trigger: GAGATGGGGAGATTCAGGATCCCCCTGTGCCAGAGCACAGCCTCACCGGATGCTGCTTCCCACACTGAAGTGTCCTGTCCGACCATTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR TCA 90 bp GTGGCAGACAGACTAGCAGCAGGCGGGGACCACGTCGTGCTCTTGTaGACAGAGGCCTGTGGTTGGTTACTCATCCCGGTAAACCAAAGG +
Preference number: 1 (lower is better)
Translates to: VADRLAAGGDHVVLL*TEACGWLLIPVNQR
Trigger: CCTTTGGTTTACCGGGATGAGTAACCAACCACAGGCCTCTGTTCACAAGAGCACGACGTGGTCCCCGCCTGCTGCTAGTCTGTCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CCA 90 bp CAGGACACTTCAGTGTGGGAAGCAGCATCCGGTGAGGCTGTGCTCTaGCACAGGGGGATCCTGAATCTCCCCATCTCTTCTAAGCTGACC +
Preference number: 1 (lower is better)
Translates to: QDTSVWEAASGEAVL*HRGILNLPISSKLT
Trigger: GGTCAGCTTAGAAGAGATGGGGAGATTCAGGATCCCCCTGTGCCAGAGCACAGCCTCACCGGATGCTGCTTCCCACACTGAAGTGTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR TCA 90 bp TCCTCCCTGTTTAGGCTGTGGAAAACTGGCCTCCAAACTCTGCAGTaGCAACACAAGATGGCCGTGAAGCAAGCCTGGCACCAGAGGGTC +
Preference number: 1 (lower is better)
Translates to: SSLFRLWKTGLQTLQ*QHKMAVKQAWHQRV
Trigger: GACCCTCTGGTGCCAGGCTTGCTTCACGGCCATCTTGTGTTGTCACTGCAGAGTTTGGAGGCCAGTTTTCCACAGCCTAAACAGGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR TCA 90 bp GGTCATCAGCACACACAAACACAACAGTTTCTGGGGTCCTTCCGCTaGAGTGTGCTATGGATGTTGGGAGGCCCCCAGTGGCAGACAGAC +
Preference number: 1 (lower is better)
Translates to: GHQHTQTQQFLGSFR*SVLWMLGGPQWQTD
Trigger: GTCTGTCTGCCACTGGGGGCCTCCCAACATCCATAGCACACTTCAGCGGAAGGACCCCAGAAACTGTTGTGTTTGTGTGTGCTGATGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR GCA 90 bp AGCACACACAAACACAACAGTTTCTGGGGTCCTTCCGCTGAAGTGTaGTATGGATGTTGGGAGGCCCCCAGTGGCAGACAGACTAGCAGC +
Preference number: 1 (lower is better)
Translates to: STHKHNSFWGPSAEV*YGCWEAPSGRQTSS
Trigger: GCTGCTAGTCTGTCTGCCACTGGGGGCCTCCCAACATCCATAGCACACTTCAGCGGAAGGACCCCAGAAACTGTTGTGTTTGTGTGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR TCA 90 bp CAGAAGTCCCCTCATCCGGACGCAGGGCTGGGTGACGAGGTGAAATaGCACACTAGGTCATCAGCACACACAAACACAACAGTTTCTGGG +
Preference number: 1 (lower is better)
Translates to: QKSPHPDAGLGDEVK*HTRSSAHTNTTVSG
Trigger: CCCAGAAACTGTTGTGTTTGTGTGTGCTGATGACCTAGTGTGTCATTTCACCTCGTCACCCAGCCCTGCGTCCGGATGAGGGGACTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CCA 90 bp TCAACAGAAGTCACTGTAAATGTGACAACCGTGAAAGGGGACACCTaGGGCAATCCTTCACAGGCCAGCCTGGAATCAGGGACCCAACAG +
Preference number: 1 (lower is better)
Translates to: STEVTVNVTTVKGDT*GNPSQASLESGTQQ
Trigger: CTGTTGGGTCCCTGATTCCAGGCTGGCCTGTGAAGGATTGCCCCAGGTGTCCCCTTTCACGGTTGTCACATTTACAGTGACTTCTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR TCA 90 bp TTGTGCAGAAGTCCCCTCATCCGGACGCAGGGCTGGGTGACGAGGTaGAATGACACACTAGGTCATCAGCACACACAAACACAACAGTTT +
Preference number: 1 (lower is better)
Translates to: LCRSPLIRTQGWVTR*NDTLGHQHTQTQQF
Trigger: AAACTGTTGTGTTTGTGTGTGCTGATGACCTAGTGTGTCATTTCACCTCGTCACCCAGCCCTGCGTCCGGATGAGGGGACTTCTGCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR GCA 90 bp TCTCCTCTGGTCTTCCCAATTTGGGAGAGGTCAGGCTTAGTGTTTTaGTGTTTCCCACGAGCCAGCCACATCCTCATGTTAGGGACCACA +
Preference number: 1 (lower is better)
Translates to: SPLVFPIWERSGLVF*CFPRASHILMLGTT
Trigger: TGTGGTCCCTAACATGAGGATGTGGCTGGCTCGTGGGAAACAGCAAAACACTAAGCCTGACCTCTCCCAAATTGGGAAGACCAGAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CCA 90 bp TGTCCTCAGGAAGTAAAATGGCTCGCCAGCTTTCCTACCTGCTTGTaGATGCCTCAGATAGCAATGGTCGGACAGGACACTTCAGTGTGG +
Preference number: 1 (lower is better)
Translates to: CPQEVKWLASFPTCL*MPQIAMVGQDTSVW
Trigger: CCACACTGAAGTGTCCTGTCCGACCATTGCTATCTGAGGCATCCACAAGCAGGTAGGAAAGCTGGCGAGCCATTTTACTTCCTGAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CCA 90 bp TTGACTCAGAGCCTGTGGCTGGGGAATTGTCCTCAGGAAGTAAAATaGCTCGCCAGCTTTCCTACCTGCTTGTGGATGCCTCAGATAGCA +
Preference number: 1 (lower is better)
Translates to: LTQSLWLGNCPQEVK*LASFPTCLWMPQIA
Trigger: TGCTATCTGAGGCATCCACAAGCAGGTAGGAAAGCTGGCGAGCCATTTTACTTCCTGAGGACAATTCCCCAGCCACAGGCTCTGAGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR GCA 90 bp GGGAATTGTCCTCAGGAAGTAAAATGGCTCGCCAGCTTTCCTACCTaGTTGTGGATGCCTCAGATAGCAATGGTCGGACAGGACACTTCA +
Preference number: 1 (lower is better)
Translates to: GNCPQEVKWLASFPT*LWMPQIAMVGQDTS
Trigger: TGAAGTGTCCTGTCCGACCATTGCTATCTGAGGCATCCACAAGCAGGTAGGAAAGCTGGCGAGCCATTTTACTTCCTGAGGACAATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CCA 90 bp TGGCTTTTAGCCATTTGTGCTCGCCTGGTCATAAACTCCTGGTCCTaGGAGAGGATGGGGCTTCCCTTAAGGAAAGATGCAGGAAATAAG +
Preference number: 1 (lower is better)
Translates to: WLLAICARLVINSWS*ERMGLPLRKDAGNK
Trigger: CTTATTTCCTGCATCTTTCCTTAAGGGAAGCCCCATCCTCTCCCAGGACCAGGAGTTTATGACCAGGCGAGCACAAATGGCTAAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR TCA 90 bp ACCCAAAGGTCTAATCTGGGAGAGACAAAGAGAAGCCCACTGGGATaGCTGGACCAGTGGTTAAGACAGGGAAAATATCTGTCCTGGAGA +
Preference number: 1 (lower is better)
Translates to: TQRSNLGETKRSPLG*LDQWLRQGKYLSWR
Trigger: TCTCCAGGACAGATATTTTCCCTGTCTTAACCACTGGTCCAGTCATCCCAGTGGGCTTCTCTTTGTCTCTCCCAGATTAGACCTTTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CCA 90 bp CTCAGATTAGATGTTGTGATGCCAATCTCACCCAAAGGTCTAATCTaGGAGAGACAAAGAGAAGCCCACTGGGATGACTGGACCAGTGGT +
Preference number: 1 (lower is better)
Translates to: LRLDVVMPISPKGLI*ERQREAHWDDWTSG
Trigger: ACCACTGGTCCAGTCATCCCAGTGGGCTTCTCTTTGTCTCTCCCAGATTAGACCTTTGGGTGAGATTGGCATCACAACATCTAATCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CCA 90 bp TTGCTGCTAGGATGCTTACCAAATAGAAATTTGACTCAGAGCCTGTaGCTGGGGAATTGTCCTCAGGAAGTAAAATGGCTCGCCAGCTTT +
Preference number: 1 (lower is better)
Translates to: LLLGCLPNRNLTQSL*LGNCPQEVKWLASF
Trigger: AAAGCTGGCGAGCCATTTTACTTCCTGAGGACAATTCCCCAGCCACAGGCTCTGAGTCAAATTTCTATTTGGTAAGCATCCTAGCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR TCA 90 bp AGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCACAGAGACTaGACACGAACACAAGGAGGAGGAGAAAGCTGTAGTATCTGTCCA +
Preference number: 1 (lower is better)
Translates to: SAHCHLNGKESLHRD*TRTQGGGESCSICP
Trigger: TGGACAGATACTACAGCTTTCTCCTCCTCCTTGTGTTCGTGTTCAGTCTCTGTGGAGACTTTCTTTTCCATTCAAATGACAGTGCGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CCA 90 bp TGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTaGAGGAGCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGA +
Preference number: 1 (lower is better)
Translates to: CTCSYHLQKHISLGS*RSTPCSLPSETLKG
Trigger: TCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR CCA 90 bp CTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTaGGAAGCTGGAGGAGCACTCCCTGTTCTCTCCCCAGTGAAACAC +
Preference number: 1 (lower is better)
Translates to: LLCAHVPTTYKNIFL*EAGGALPVLSPVKH
Trigger: GTGTTTCACTGGGGAGAGAACAGGGAGTGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR TCA 90 bp CCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATTGGAAAGTTaGATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAA +
Preference number: 1 (lower is better)
Translates to: PTLPGQCSGILRLES*ISPGKRISQMSLFE
Trigger: TTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGATTCAACTTTCCAATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR TCA 90 bp CTGGTCTCAGGTAACTTGGGCCATTCTGGGGTTCTAGAACATGTGTaGATAAGTCCTTGTTTTATTCTCAGCCTCTATGAGGGAAATGAA +
Preference number: 1 (lower is better)
Translates to: LVSGNLGHSGVLEHV*ISPCFILSLYEGNE
Trigger: TTCATTTCCCTCATAGAGGCTGAGAATAAAACAAGGACTTATTCACACATGTTCTAGAACCCCAGAATGGCCCAAGTTACCTGAGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR TCA 90 bp AGTAGTAAGAGAAATGCTTCCAGCTTACAAAAGGGCTCACAGTTCTaGGGCAGCCTTTTGCACTGCATACCCTACATGCAACATCTTAAA +
Preference number: 1 (lower is better)
Translates to: SSKRNASSLQKGSQF*GSLLHCIPYMQHLK
Trigger: TTTAAGATGTTGCATGTAGGGTATGCAGTGCAAAAGGCTGCCTCAGAACTGTGAGCCCTTTTGTAAGCTGGAAGCATTTCTCTTACTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR TCA 90 bp TCAAATGTGGTCATTGTGACCTGTAACATCTTGGGCAACAGATCTTaGCCAGGGATCATTTTGCACCCGATGGGATATTTGACAATATCT +
Preference number: 1 (lower is better)
Translates to: SNVVIVTCNILGNRS*PGIILHPMGYLTIS
Trigger: AGATATTGTCAAATATCCCATCGGGTGCAAAATGATCCCTGGTCAAGATCTGTTGCCCAAGATGTTACAGGTCACAATGACCACATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR TCA 90 bp ACAAGGACTTTAAAGAGTTGCCCCTTTGAGGGCTGGAACATTCTTTaGAAATGCCAAATTGTGAATGGTGCTCTTTGGAAGTTTCTCGTA +
Preference number: 1 (lower is better)
Translates to: TRTLKSCPFEGWNIL*KCQIVNGALWKFLV
Trigger: TACGAGAAACTTCCAAAGAGCACCATTCACAATTTGGCATTTTCAAAGAATGTTCCAGCCCTCAAAGGGGCAACTCTTTAAAGTCCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR GCA 90 bp CTTAAGGGAAATAACTCAAAACATCTGGCCACATCAAACCAACTCTaGCTGGGCAATGCTCTGGAATACTTAGATTGGAAAGTTGAATCT +
Preference number: 1 (lower is better)
Translates to: LKGNNSKHLATSNQL*LGNALEYLDWKVES
Trigger: AGATTCAACTTTCCAATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTTGAGTTATTTCCCTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR TCA 90 bp AAGAATACTTGTAGCGAGAGAGAAATTGTTGTGAAACAGAAGTTCTaGAACAGGAAGAAATATGGACACAATGTCACCTGCCTCTTGCAA +
Preference number: 1 (lower is better)
Translates to: KNTCSEREIVVKQKF*NRKKYGHNVTCLLQ
Trigger: TTGCAAGAGGCAGGTGACATTGTGTCCATATTTCTTCCTGTTTCAGAACTTCTGTTTCACAACAATTTCTCTCTCGCTACAAGTATTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR TCA 90 bp CCAGTGCTGAGTGAAAGAATACTTGTAGCGAGAGAGAAATTGTTGTaGAACAGAAGTTCTGAAACAGGAAGAAATATGGACACAATGTCA +
Preference number: 1 (lower is better)
Translates to: PVLSERILVAREKLL*NRSSETGRNMDTMS
Trigger: TGACATTGTGTCCATATTTCTTCCTGTTTCAGAACTTCTGTTTCACAACAATTTCTCTCTCGCTACAAGTATTCTTTCACTCAGCACTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR GCA 90 bp GTTTCTCGTAGCACATTCATACACAATACTCGGAGTCAACATGTTTaGCCTAAGAAGAACACTTCAATTTTAACGACCCTAACTCACTTT +
Preference number: 1 (lower is better)
Translates to: VSRSTFIHNTRSQHV*PKKNTSILTTLTHF
Trigger: AAAGTGAGTTAGGGTCGTTAAAATTGAAGTGTTCTTCTTAGGGCAAACATGTTGACTCCGAGTATTGTGTATGAATGTGCTACGAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CAA 90 bp GAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTaGTGCAGAAGTCCCCTCATCCGGACGCAGGGCTGGGTGACGAGG +
Preference number: 2 (lower is better)
Translates to: EEKAVVSVHQPRFCH*CRSPLIRTQGWVTR
Trigger: CCTCGTCACCCAGCCCTGCGTCCGGATGAGGGGACTTCTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR GCA 90 bp GGGGACACCTGGGGCAATCCTTCACAGGCCAGCCTGGAATCAGGGACCCAACAGACTCTGCCTGGGCAATaGTCTGGAATACTTAGATTG +
Preference number: 2 (lower is better)
Translates to: GDTWGNPSQASLESGTQQTLPGQ*SGILRL
Trigger: CAATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGT...CTGTTGGGTCCCTGATTCCAGGCTGGCCTGTGAAGGATTGCCCCAGGTGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR GCA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGGCGGGGACCACGTCGTaGTCTTGTGAACAGAGGCCT +
Preference number: 2 (lower is better)
Translates to: GGESCSICPPAEILSFVQAGTTS*SCEQRP
Trigger: AGGCCTCTGTTCACAAGAGCACGACGTGGTCCCCGC...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR TCA 90 bp GGGGACACCTGGGGCAATCCTTCACAGGCCAGCCTGGAATCAGGGACCCAACAGCTTAGATTGGAAAGTTaGATCTCTCCTGGCAAAAGA +
Preference number: 2 (lower is better)
Translates to: GDTWGNPSQASLESGTQQLRLES*ISPGKR
Trigger: TCTTTTGCCAGGAGAGATTCAACTTTCCAATCTAAG...CTGTTGGGTCCCTGATTCCAGGCTGGCCTGTGAAGGATTGCCCCAGGTGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CAA 90 bp TTCTCCTCTGGTCTTCCCAATTTGGGAGAGGTCAGGCTTAGTGTTTaGCTGTTTCCCACGAGCCAGCCACATCCTCATGTTAGGGACCAC +
Preference number: 2 (lower is better)
Translates to: FSSGLPNLGEVRLSV*LFPTSQPHPHVRDH
Trigger: GTGGTCCCTAACATGAGGATGTGGCTGGCTCGTGGGAAACAGCAAAACACTAAGCCTGACCTCTCCCAAATTGGGAAGACCAGAGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CCA 90 bp GAGAAGCCCACTGGGATGACTGGACCAGTGGTTAAGACAGGGAAAATATCTGTCCTTCACAGGCCAGCCTaGAATCAGGGACCCAACAGT +
Preference number: 2 (lower is better)
Translates to: EKPTGMTGPVVKTGKISVLHRPA*NQGPNS
Trigger: ACTGTTGGGTCCCTGATTCCAGGCTGGCCTGTGAAG...GACAGATATTTTCCCTGTCTTAACCACTGGTCCAGTCATCCCAGTGGGCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CCA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGCTGGTCATAAACTCCTaGTCCTGGGAGAGGATGGGG +
Preference number: 2 (lower is better)
Translates to: GGESCSICPPAEILSFVQLVINS*SWERMG
Trigger: CCCCATCCTCTCCCAGGACCAGGAGTTTATGACCAG...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR TCA 90 bp GAGAAGCCCACTGGGATGACTGGACCAGTGGTTAAGACAGGGAAAATATCTGTCACTGCAAAGGCATTCTaGGCAAGAGGATGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: EKPTGMTGPVVKTGKISVTAKAF*ARGCRW
Trigger: CCACCTGCATCCTCTTGCTCAGAATGCCTTTGCAGT...GACAGATATTTTCCCTGTCTTAACCACTGGTCCAGTCATCCCAGTGGGCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CCA 90 bp ACAAACACAACAGTTTCTGGGGTCCTTCCGCTGAAGTGTGCTATGGATGTTGGGGTGAACAGAGGCCTGTaGTTGGTTACTCATCCCGGT +
Preference number: 2 (lower is better)
Translates to: TNTTVSGVLPLKCAMDVGVNRGL*LVTHPG
Trigger: ACCGGGATGAGTAACCAACCACAGGCCTCTGTTCAC...CCCAACATCCATAGCACACTTCAGCGGAAGGACCCCAGAAACTGTTGTGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR TCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATCACCACCCTGTGTGGTaGGGTTTACAGTCAGTCGTT +
Preference number: 2 (lower is better)
Translates to: HLATSNQLCLGNALEYLDHHPVW*GLQSVV
Trigger: AACGACTGACTGTAAACCTCACCACACAGGGTGGTG...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR CCA 90 bp ACAAACACAACAGTTTCTGGGGTCCTTCCGCTGAAGTGTGCTATGGATGTTGGGAGCAAGACGGGGCTCTaGGAAGGCTTCTTTAGTATG +
Preference number: 2 (lower is better)
Translates to: TNTTVSGVLPLKCAMDVGSKTGL*EGFFSM
Trigger: CATACTAAAGAAGCCTTCCCAGAGCCCCGTCTTGCT...CCCAACATCCATAGCACACTTCAGCGGAAGGACCCCAGAAACTGTTGTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CCA 90 bp ACAAACACAACAGTTTCTGGGGTCCTTCCGCTGAAGTGTGCTATGGATGTTGGGAAGGTTGAGAAACCCTaGTCTCAGGTAACTTGGGCC +
Preference number: 2 (lower is better)
Translates to: TNTTVSGVLPLKCAMDVGKVEKP*SQVTWA
Trigger: GGCCCAAGTTACCTGAGACCAGGGTTTCTCAACCTT...CCCAACATCCATAGCACACTTCAGCGGAAGGACCCCAGAAACTGTTGTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR GCA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGCCATGTGCAGGGCTTTaGCACAGAAACACCAACATA +
Preference number: 2 (lower is better)
Translates to: GGESCSICPPAEILSFVQPCAGL*HRNTNI
Trigger: TATGTTGGTGTTTCTGTGGCAAAGCCCTGCACATGG...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CCA 90 bp GATGCAGGAAATAAGAGCAAAAGAAACATCCCTAAGAGGGGTGTTCAACAGAAGGTGAAAGGGGACACCTaGGGCAATCCTTCACAGGCC +
Preference number: 2 (lower is better)
Translates to: DAGNKSKRNIPKRGVQQKVKGDT*GNPSQA
Trigger: GGCCTGTGAAGGATTGCCCCAGGTGTCCCCTTTCAC...CTTCTGTTGAACACCCCTCTTAGGGATGTTTCTTTTGCTCTTATTTCCTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR TCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCCACCACCCTGTGTGGTaGGGTTTACAGTCAGTCGTT +
Preference number: 2 (lower is better)
Translates to: ALPVLSPVKHLREITQNIHHPVW*GLQSVV
Trigger: AACGACTGACTGTAAACCTCACCACACAGGGTGGTG...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR TCA 90 bp GAGAAGCCCACTGGGATGACTGGACCAGTGGTTAAGACAGGGAAAATATCTGTCCAGCACCTAGCAAACTaGGTGACACTAAACAAGTGT +
Preference number: 2 (lower is better)
Translates to: EKPTGMTGPVVKTGKISVQHLAN*VTLNKC
Trigger: ACACTTGTTTAGTGTCACTCAGTTTGCTAGGTGCTG...GACAGATATTTTCCCTGTCTTAACCACTGGTCCAGTCATCCCAGTGGGCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR TCA 90 bp ACAAACACAACAGTTTCTGGGGTCCTTCCGCTGAAGTGTGCTATGGATGTTGGGAAGCCACCACAGTACTaGAACCTTAAGAAGACTTGG +
Preference number: 2 (lower is better)
Translates to: TNTTVSGVLPLKCAMDVGKPPQY*NLKKTW
Trigger: CCAAGTCTTCTTAAGGTTTCAGTACTGTGGTGGCTT...CCCAACATCCATAGCACACTTCAGCGGAAGGACCCCAGAAACTGTTGTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR GCA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGCGAGGAATTGTGGGCTaGACATCTGAAGAACATAGA +
Preference number: 2 (lower is better)
Translates to: GGESCSICPPAEILSFVQRGIVG*TSEEHR
Trigger: TCTATGTTCTTCAGATGTGCAGCCCACAATTCCTCG...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR GCA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGAGGACACAATGTCACCTaGCTCTTGCAAGGCTCTAGG +
Preference number: 2 (lower is better)
Translates to: NSIACKAETRRSPEEICRGHNVT*LLQGSR
Trigger: CCTAGAGCCTTGCAAGAGGCAGGTGACATTGTGTCC...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR GCA 90 bp ACAAACACAACAGTTTCTGGGGTCCTTCCGCTGAAGTGTGCTATGGATGTTGGGGTATTACTAAGGCACTaGTTACGGGAACACTTTGGC +
Preference number: 2 (lower is better)
Translates to: TNTTVSGVLPLKCAMDVGVLLRH*LREHFG
Trigger: GCCAAAGTGTTCCCGTAAGCAGTGCCTTAGTAATAC...CCCAACATCCATAGCACACTTCAGCGGAAGGACCCCAGAAACTGTTGTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CCA 90 bp GAGAAGCCCACTGGGATGACTGGACCAGTGGTTAAGACAGGGAAAATATCTGTCTTGCACTTTCTCCTCTaGTCTTCCCAATTTGGGAGA +
Preference number: 2 (lower is better)
Translates to: EKPTGMTGPVVKTGKISVLHFLL*SSQFGR
Trigger: TCTCCCAAATTGGGAAGACCAGAGGAGAAAGTGCAA...GACAGATATTTTCCCTGTCTTAACCACTGGTCCAGTCATCCCAGTGGGCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CCA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGTTGCACTTTCTCCTCTaGTCTTCCCAATTTGGGAGA +
Preference number: 2 (lower is better)
Translates to: GGESCSICPPAEILSFVQLHFLL*SSQFGR
Trigger: TCTCCCAAATTGGGAAGACCAGAGGAGAAAGTGCAA...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR TCA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAAGGTCAAAGCAGGTGTTaGGACAGGGAAGGGGGTGTG +
Preference number: 2 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKGQSRC*DREGGV
Trigger: CACACCCCCTTCCCTGTCTCAACACCTGCTTTGACC...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR TCA 90 bp AGATTAGATGTTGTGATGCCAATCTCACCCAAAGGTCTAATCTGGGAGAGACAAAGAAGCCCACTGGGATaGCTGGACCAGTGGTTAAGA +
Preference number: 2 (lower is better)
Translates to: RLDVVMPISPKGLIWERQRSPLG*LDQWLR
Trigger: TCTTAACCACTGGTCCAGTCATCCCAGTGGGCTTCT...TTGTCTCTCCCAGATTAGACCTTTGGGTGAGATTGGCATCACAACATCTAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR GCA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGACTGGCCTCCAAACTCTaGAGTGACAACACAAGATGG +
Preference number: 2 (lower is better)
Translates to: NSIACKAETRRSPEEICRLASKL*SDNTRW
Trigger: CCATCTTGTGTTGTCACTGCAGAGTTTGGAGGCCAG...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CAA 90 bp TCTGAGTGCAGGACTTTGCTGCTAGGATGCTTACCAAATAGAAATTaGACTCAGAGCCTGTGGCTGGGGAATTGTCCTCAGGAAGTAAAA +
Preference number: 2 (lower is better)
Translates to: SECRTLLLGCLPNRN*TQSLWLGNCPQEVK
Trigger: TTTTACTTCCTGAGGACAATTCCCCAGCCACAGGCTCTGAGTCAAATTTCTATTTGGTAAGCATCCTAGCAGCAAAGTCCTGCACTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR TCA 90 bp AGAACTGACTTGTGTCCAGTTTCGGATTTTACACCAAGCAGTCAGTTTCCTATACACCACCCTGTGTGGTaGGGTTTACAGTCAGTCGTT +
Preference number: 2 (lower is better)
Translates to: RTDLCPVSDFTPSSQFPIHHPVW*GLQSVV
Trigger: AACGACTGACTGTAAACCTCACCACACAGGGTGGTG...TATAGGAAACTGACTGCTTGGTGTAAAATCCGAAACTGGACACAAGTCAGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR TCA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGATTCCCCAGTGCTGAGTaGAAGAATACTTGTAGCGAG +
Preference number: 2 (lower is better)
Translates to: NSIACKAETRRSPEEICRFPSAE*KNTCSE
Trigger: CTCGCTACAAGTATTCTTTCACTCAGCACTGGGGAA...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR GCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCACATCAAACCAACTCTaGCTGGGCAATGCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: ALPVLSPVKHLREITQNITSNQL*LGNALE
Trigger: TTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGT...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR GCA 90 bp AGAACTGACTTGTGTCCAGTTTCGGATTTTACACCAAGCAGTCAGTTTCCTATACTGTCCCCGTCTCTGTaGCAACAGAGTTGTCCTCTA +
Preference number: 2 (lower is better)
Translates to: RTDLCPVSDFTPSSQFPILSPSL*QQSCPL
Trigger: TAGAGGACAACTCTGTTGGCACAGAGACGGGGACAG...TATAGGAAACTGACTGCTTGGTGTAAAATCCGAAACTGGACACAAGTCAGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CCA 90 bp TCATTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTGTGTGCTATGGATGTTaGGAGGCCCCCAGTGGCAGA +
Preference number: 2 (lower is better)
Translates to: SLCKPDKCALSFEWKRKSVCYGC*EAPSGR
Trigger: TCTGCCACTGGGGGCCTCCCAACATCCATAGCACAC...AGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CAA 90 bp TCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTaGGGAAGCTGGAGGAGCACTCCCTGTTCTCTCCCCAGTGAAACA +
Preference number: 2 (lower is better)
Translates to: SIVCTCSYHLQKHIS*GSWRSTPCSLPSET
Trigger: TGTTTCACTGGGGAGAGAACAGGGAGTGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR TCA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGAGTCTACAGACACATTaGGATATACGTACATATCAG +
Preference number: 2 (lower is better)
Translates to: GGESCSICPPAEILSFVQSLQTH*DIRTYQ
Trigger: CTGATATGTACGTATATCTCAATGTGTCTGTAGACT...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR TCA 90 bp TTAGTGTTTTGCTGTTTCCCACGAGCCAGCCACATCCTCATGTTAGGGACCACAAGTCTACAGACACATTaGGATATACGTACATATCAG +
Preference number: 2 (lower is better)
Translates to: LVFCCFPRASHILMLGTTSLQTH*DIRTYQ
Trigger: CTGATATGTACGTATATCTCAATGTGTCTGTAGACT...TGTGGTCCCTAACATGAGGATGTGGCTGGCTCGTGGGAAACAGCAAAACACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR TCA 90 bp GAGAAGCCCACTGGGATGACTGGACCAGTGGTTAAGACAGGGAAAATATCTGTCAAAGAATCTCCCAAATaGGCCTATTTGAAAAGGTCA +
Preference number: 2 (lower is better)
Translates to: EKPTGMTGPVVKTGKISVKESPK*AYLKRS
Trigger: TGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTT...GACAGATATTTTCCCTGTCTTAACCACTGGTCCAGTCATCCCAGTGGGCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR TCA 90 bp AGAACTGACTTGTGTCCAGTTTCGGATTTTACACCAAGCAGTCAGTTTCCTATATTCCTGGGTAGAATATaGACCAGACAGCTCTCCCAC +
Preference number: 2 (lower is better)
Translates to: RTDLCPVSDFTPSSQFPIFLGRI*TRQLSH
Trigger: GTGGGAGAGCTGTCTGGTTCATATTCTACCCAGGAA...TATAGGAAACTGACTGCTTGGTGTAAAATCCGAAACTGGACACAAGTCAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR TCA 90 bp TTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCACTCCAAACTCTGCAGTaGCAACACAAGATGGCCGTG +
Preference number: 2 (lower is better)
Translates to: LCKPDKCALSFEWKRKSPLQTLQ*QHKMAV
Trigger: CACGGCCATCTTGTGTTGTCACTGCAGAGTTTGGAG...TGGAGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR GCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCACTCTGCCTGGGCAATaGTCTGGAATACTTAGATTG +
Preference number: 2 (lower is better)
Translates to: ALPVLSPVKHLREITQNITLPGQ*SGILRL
Trigger: CAATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGT...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR GCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCAACATCAAACCAACTCTaGCTGGGCAATGCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGATSNQL*LGNALE
Trigger: TTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGT...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR GCA 90 bp GAGAAGCCCACTGGGATGACTGGACCAGTGGTTAAGACAGGGAAAATATCTGTCTCATGTTCTATTGTGTaGACATGTTCCTACCACTTA +
Preference number: 2 (lower is better)
Translates to: EKPTGMTGPVVKTGKISVSCSIV*TCSYHL
Trigger: TAAGTGGTAGGAACATGTGCACACAATAGAACATGA...GACAGATATTTTCCCTGTCTTAACCACTGGTCCAGTCATCCCAGTGGGCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CCA 90 bp AAGTTGCAACCTTTTGTTTTGGTATATACATTTGAGTGTGGTGAAAGAACTGACGTGAAAGGGGACACCTaGGGCAATCCTTCACAGGCC +
Preference number: 2 (lower is better)
Translates to: KLQPFVLVYTFECGERTDVKGDT*GNPSQA
Trigger: GGCCTGTGAAGGATTGCCCCAGGTGTCCCCTTTCAC...GTCAGTTCTTTCACCACACTCAAATGTATATACCAAAACAAAAGGTTGCAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CCA 90 bp AGAACTGACTTGTGTCCAGTTTCGGATTTTACACCAAGCAGTCAGTTTCCTATACCTCAGGAAGTAAAATaGCTCGCCAGCTTTCCTACC +
Preference number: 2 (lower is better)
Translates to: RTDLCPVSDFTPSSQFPIPQEVK*LASFPT
Trigger: GGTAGGAAAGCTGGCGAGCCATTTTACTTCCTGAGG...TATAGGAAACTGACTGCTTGGTGTAAAATCCGAAACTGGACACAAGTCAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR TCA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATCACCACCCTGTGTGGTaGGGTTTACAGTCAGTCGTT +
Preference number: 2 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYHHPVW*GLQSVV
Trigger: AACGACTGACTGTAAACCTCACCACACAGGGTGGTG...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR GCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCACGAGGAATTGTGGGCTaGACATCTGAAGAACATAGA +
Preference number: 2 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGARGIVG*TSEEHR
Trigger: TCTATGTTCTTCAGATGTGCAGCCCACAATTCCTCG...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR GCA 90 bp GAGAAGCCCACTGGGATGACTGGACCAGTGGTTAAGACAGGGAAAATATCTGTCAGATTCTGTATACTTTaGATCTCACAGTGCAGTATT +
Preference number: 2 (lower is better)
Translates to: EKPTGMTGPVVKTGKISVRFCIL*ISQCSI
Trigger: AATACTGCACTGTGAGATGCAAAGTATACAGAATCT...GACAGATATTTTCCCTGTCTTAACCACTGGTCCAGTCATCCCAGTGGGCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR GCA 90 bp AGAACTGACTTGTGTCCAGTTTCGGATTTTACACCAAGCAGTCAGTTTCCTATAAAGGCTTTTCAGAAATaGCATGTGCAGGGCTTTGCC +
Preference number: 2 (lower is better)
Translates to: RTDLCPVSDFTPSSQFPIKAFQK*HVQGFA
Trigger: GGCAAAGCCCTGCACATGGCATTTCTGAAAAGCCTT...TATAGGAAACTGACTGCTTGGTGTAAAATCCGAAACTGGACACAAGTCAGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CCA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGAAGTTCTAGGACAGCTTaGCTTTTAGCCATTTGTGCT +
Preference number: 2 (lower is better)
Translates to: NSIACKAETRRSPEEICRSSRTA*LLAICA
Trigger: AGCACAAATGGCTAAAAGCCAAGCTGTCCTAGAACT...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CCA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAAAGCAAGACGGGGCTCTaGGAAGGCTTCTTTAGTATG +
Preference number: 2 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKSKTGL*EGFFSM
Trigger: CATACTAAAGAAGCCTTCCCAGAGCCCCGTCTTGCT...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR TCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGTCTACAGACACATTaGGATATACGTACATATCAG +
Preference number: 2 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILSLQTH*DIRTYQ
Trigger: CTGATATGTACGTATATCTCAATGTGTCTGTAGACT...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR TCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCAGTACTGTAACTTACTaGGAGACGCTAAAGAAATGG +
Preference number: 2 (lower is better)
Translates to: ALPVLSPVKHLREITQNISTVTY*ETLKKW
Trigger: CCATTTCTTTAGCGTCTCTCAGTAAGTTACAGTACT...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR TCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAAAGAATCTCCCAAATaGGCCTATTTGAAAAGGTCA +
Preference number: 2 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILKESPK*AYLKRS
Trigger: TGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTT...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR TCA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGACTTAGATTGGAAAGTTaGATCTCTCCTGGCAAAAGA +
Preference number: 2 (lower is better)
Translates to: NSIACKAETRRSPEEICRLRLES*ISPGKR
Trigger: TCTTTTGCCAGGAGAGATTCAACTTTCCAATCTAAG...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR TCA 90 bp AGAACTGACTTGTGTCCAGTTTCGGATTTTACACCAAGCAGTCAGTTTCCTATAGACTGCCATACAGAATaGAGGACAAAAGACAGACTC +
Preference number: 2 (lower is better)
Translates to: RTDLCPVSDFTPSSQFPIDCHTE*RTKDRL
Trigger: GAGTCTGTCTTTTGTCCTTCATTCTGTATGGCAGTC...TATAGGAAACTGACTGCTTGGTGTAAAATCCGAAACTGGACACAAGTCAGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR TCA 90 bp AGAACTGACTTGTGTCCAGTTTCGGATTTTACACCAAGCAGTCAGTTTCCTATACAAATGTGGTCATTGTaGCCTGTAACATCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: RTDLCPVSDFTPSSQFPIQMWSL*PVTSWA
Trigger: TGCCCAAGATGTTACAGGTCACAATGACCACATTTG...TATAGGAAACTGACTGCTTGGTGTAAAATCCGAAACTGGACACAAGTCAGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR TCA 90 bp TTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCATTCCCCAGTGCTGAGTaGAAGAATACTTGTAGCGAG +
Preference number: 2 (lower is better)
Translates to: LCKPDKCALSFEWKRKSPFPSAE*KNTCSE
Trigger: CTCGCTACAAGTATTCTTTCACTCAGCACTGGGGAA...TGGAGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR GCA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAAACATCAAACCAACTCTaGCTGGGCAATGCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKTSNQL*LGNALE
Trigger: TTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGT...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR GCA 90 bp TTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCAGGCAGCCTTTTGCACTaGATACCCTACATGCAACAT +
Preference number: 2 (lower is better)
Translates to: LCKPDKCALSFEWKRKSPGSLLH*IPYMQH
Trigger: ATGTTGCATGTAGGGTATGCAGTGCAAAAGGCTGCC...TGGAGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CCA 90 bp TTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGACAAACCAACTCTGCCTaGGCAATGCTCTGGAATACT +
Preference number: 2 (lower is better)
Translates to: LCAHVPTTYKNIFLWEAGQTNSA*AMLWNT
Trigger: AGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTG...TCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR CCA 90 bp TCATTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTACAGAGGCCTGTGGTTaGTTACTCATCCCGGTAAAC +
Preference number: 2 (lower is better)
Translates to: SLCKPDKCALSFEWKRKSTEACG*LLIPVN
Trigger: GTTTACCGGGATGAGTAACCAACCACAGGCCTCTGT...AGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CAA 90 bp GGGCTGGAACATTCTTTGAAAATGCCAAATTGTGAATGGTGCTCTTaGGAAGTTTCTCGTAGCACATTCATACACAATACTCGGAGTCAA +
Preference number: 2 (lower is better)
Translates to: GLEHSLKMPNCEWCS*EVSRSTFIHNTRSQ
Trigger: TTGACTCCGAGTATTGTGTATGAATGTGCTACGAGAAACTTCCAAAGAGCACCATTCACAATTTGGCATTTTCAAAGAATGTTCCAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR TCA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTGTATCCACAGGCTGGTaGGGATGCTTACAATTTTCT +
Preference number: 2 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSVSTGW*GCLQFS
Trigger: AGAAAATTGTAAGCATCCTCACCAGCCTGTGGATAC...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR TCA 90 bp TTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCACAGCACCTAGCAAACTaGGTGACACTAAACAAGTGT +
Preference number: 2 (lower is better)
Translates to: LCKPDKCALSFEWKRKSPQHLAN*VTLNKC
Trigger: ACACTTGTTTAGTGTCACTCAGTTTGCTAGGTGCTG...TGGAGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR GCA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAACGAGGAATTGTGGGCTaGACATCTGAAGAACATAGA +
Preference number: 2 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKRGIVG*TSEEHR
Trigger: TCTATGTTCTTCAGATGTGCAGCCCACAATTCCTCG...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR GCA 90 bp TTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCAGTAAATCTCCTACAGTaGAAAGGACAGCTCTGCAGA +
Preference number: 2 (lower is better)
Translates to: LCKPDKCALSFEWKRKSPVNLLQ*KGQLCR
Trigger: TCTGCAGAGCTGTCCTTTGCACTGTAGGAGATTTAC...TGGAGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATGAGACGCTAAAGAAATaGATGTGCTTCAAGAGGATG +
Preference number: 2 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDETLKK*MCFKRM
Trigger: CATCCTCTTGAAGCACATCCATTTCTTTAGCGTCTC...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR CCA 90 bp AGAACTGACTTGTGTCCAGTTTCGGATTTTACACCAAGCAGTCAGTTTCCTATAGAGACGCTAAAGAAATaGATGTGCTTCAAGAGGATG +
Preference number: 2 (lower is better)
Translates to: RTDLCPVSDFTPSSQFPIETLKK*MCFKRM
Trigger: CATCCTCTTGAAGCACATCCATTTCTTTAGCGTCTC...TATAGGAAACTGACTGCTTGGTGTAAAATCCGAAACTGGACACAAGTCAGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CCA 90 bp AGAACTGACTTGTGTCCAGTTTCGGATTTTACACCAAGCAGTCAGTTTCCTATAAATGGGCATTCCAAATaGGGACAGTTTTGCACTTTC +
Preference number: 2 (lower is better)
Translates to: RTDLCPVSDFTPSSQFPINGHSK*GQFCTF
Trigger: GAAAGTGCAAAACTGTCCCCATTTGGAATGCCCATT...TATAGGAAACTGACTGCTTGGTGTAAAATCCGAAACTGGACACAAGTCAGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CCA 90 bp TCATTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCCAAAGGTCTAATCTaGGAGAGACAAAGAGAAGCC +
Preference number: 2 (lower is better)
Translates to: SLCKPDKCALSFEWKRKSPKGLI*ERQREA
Trigger: GGCTTCTCTTTGTCTCTCCCAGATTAGACCTTTGGG...AGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CAA 90 bp CACTGTCGTCTCAGTTTGAGGCTTCCAACTTTCAAAATGGTATCATaGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGA +
Preference number: 2 (lower is better)
Translates to: HCRLSLRLPTFKMVS*CKPDKCALSFEWKR
Trigger: TCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGATACCATTTTGAAAGTTGGAAGCCTCAAACTGAGACGACAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR TCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATAGTACTGTAACTTACTaGGAGACGCTAAAGAAATGG +
Preference number: 2 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDSTVTY*ETLKKW
Trigger: CCATTTCTTTAGCGTCTCTCAGTAAGTTACAGTACT...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR TCA 90 bp AGAACTGACTTGTGTCCAGTTTCGGATTTTACACCAAGCAGTCAGTTTCCTATAACACTTTGGCAGCTCTaGATTGAAAACTTCCTACAA +
Preference number: 2 (lower is better)
Translates to: RTDLCPVSDFTPSSQFPITLWQL*IENFLQ
Trigger: TTGTAGGAAGTTTTCAATTCAGAGCTGCCAAAGTGT...TATAGGAAACTGACTGCTTGGTGTAAAATCCGAAACTGGACACAAGTCAGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CCA 90 bp AGATTAGATGTTGTGATGCCAATCTCACCCAAAGGTCTAATCTGGGAGAGACAAAAGTTGAATCTCTCCTaGCAAAAGAATCTCCCAAAT +
Preference number: 2 (lower is better)
Translates to: RLDVVMPISPKGLIWERQKLNLS*QKNLPN
Trigger: ATTTGGGAGATTCTTTTGCCAGGAGAGATTCAACTT...TTGTCTCTCCCAGATTAGACCTTTGGGTGAGATTGGCATCACAACATCTAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR TCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATAGTCTACAGACACATTaGGATATACGTACATATCAG +
Preference number: 2 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDSLQTH*DIRTYQ
Trigger: CTGATATGTACGTATATCTCAATGTGTCTGTAGACT...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR GCA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCGAGGAATTGTGGGCTaGACATCTGAAGAACATAGA +
Preference number: 2 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKRGIVG*TSEEHR
Trigger: TCTATGTTCTTCAGATGTGCAGCCCACAATTCCTCG...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR GCA 90 bp TCATTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTAAGGAGAGTAGACTGTaGTTTCAGCTCAAGACAGAA +
Preference number: 2 (lower is better)
Translates to: SLCKPDKCALSFEWKRKSKESRL*FQLKTE
Trigger: TTCTGTCTTGAGCTGAAAGCACAGTCTACTCTCCTT...AGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CCA 90 bp TTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCAAAAAACATATTTCTTTaGGAAGCTGGAGGAGCACTC +
Preference number: 2 (lower is better)
Translates to: LCKPDKCALSFEWKRKSPKNIFL*EAGGAL
Trigger: GAGTGCTCCTCCAGCTTCCCAAAGAAATATGTTTTT...TGGAGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CCA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAAGAAAAGTACCATTCCTaGGTAGAATATGAACCAGAC +
Preference number: 2 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKEKYHS*VEYEPD
Trigger: GTCTGGTTCATATTCTACCCAGGAATGGTACTTTTC...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CCA 90 bp TCATTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTTCTAGCTGTTCTTCTTaGGTCCCAGTATTTTTGTGC +
Preference number: 2 (lower is better)
Translates to: SLCKPDKCALSFEWKRKSSSCSS*VPVFLC
Trigger: GCACAAAAATACTGGGACCCAAGAAGAACAGCTAGA...AGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR GCA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTCTTTGCATCTCACAGTaGAGTATTCCGTATTCATGC +
Preference number: 2 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFLCISQ*SIPYSC
Trigger: GCATGAATACGGAATACTGCACTGTGAGATGCAAAG...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR CCA 90 bp TTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAAAGTTGAATCTCTCCTaGCAAAAGAATCTCCCAAAT +
Preference number: 2 (lower is better)
Translates to: LCAHVPTTYKNIFLWEAGKLNLS*QKNLPN
Trigger: ATTTGGGAGATTCTTTTGCCAGGAGAGATTCAACTT...TCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR TCA 90 bp TCATTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTAAAGAATCTCCCAAATaGGCCTATTTGAAAAGGTCA +
Preference number: 2 (lower is better)
Translates to: SLCKPDKCALSFEWKRKSKESPK*AYLKRS
Trigger: TGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTT...AGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR GCA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGAGATTCTGTATACTTTaGATCTCACAGTGCAGTATT +
Preference number: 2 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTRFCIL*ISQCSI
Trigger: AATACTGCACTGTGAGATGCAAAGTATACAGAATCT...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR GCA 90 bp TTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCAAGATTCTGTATACTTTaGATCTCACAGTGCAGTATT +
Preference number: 2 (lower is better)
Translates to: LCKPDKCALSFEWKRKSPRFCIL*ISQCSI
Trigger: AATACTGCACTGTGAGATGCAAAGTATACAGAATCT...TGGAGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR TCA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGAAAGAATCTCCCAAATaGGCCTATTTGAAAAGGTCA +
Preference number: 2 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKKESPK*AYLKRS
Trigger: TGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTT...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR CCA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGATAACTCAAAACATCTaGCCACATCAAACCAACTCT +
Preference number: 2 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKITQNI*PHQTNS
Trigger: AGAGTTGGTTTGATGTGGCCAGATGTTTTGAGTTAT...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR CCA 90 bp AAGTTGCAACCTTTTGTTTTGGTATATACATTTGAGTGTGGTGAAAGAACTGACATAACTCAAAACATCTaGCCACATCAAACCAACTCT +
Preference number: 2 (lower is better)
Translates to: KLQPFVLVYTFECGERTDITQNI*PHQTNS
Trigger: AGAGTTGGTTTGATGTGGCCAGATGTTTTGAGTTAT...GTCAGTTCTTTCACCACACTCAAATGTATATACCAAAACAAAAGGTTGCAACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR GCA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGAGATTCTGTATACTTTaGATCTCACAGTGCAGTATT +
Preference number: 2 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKRFCIL*ISQCSI
Trigger: AATACTGCACTGTGAGATGCAAAGTATACAGAATCT...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR TCA 72 bp CGGACAGGACACTTCAGTGTGGGAAGCAGCATCCGGTaGGGCTGTGCTCTGGCACAGGGGGATCCTGAATCT +
Preference number: 3 (lower is better)
Translates to: RTGHFSVGSSIR*GCALAQGDPES
Trigger: AGATTCAGGATCCCCCTGTGCCAGAGCACAGCCTCACCGGATGCTGCTTCCCACACTGAAGTGTCCTGTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CCA 72 bp TTCTGGGGTCCTTCCGCTGAAGTGTGCTATGGATGTTaGGAGGCCCCCAGTGGCAGACAGACTAGCAGCAGG +
Preference number: 3 (lower is better)
Translates to: FWGPSAEVCYGC*EAPSGRQTSSR
Trigger: CCTGCTGCTAGTCTGTCTGCCACTGGGGGCCTCCCAACATCCATAGCACACTTCAGCGGAAGGACCCCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR TCA 72 bp AGACTAGCAGCAGGCGGGGACCACGTCGTGCTCTTGTaGACAGAGGCCTGTGGTTGGTTACTCATCCCGGTA +
Preference number: 3 (lower is better)
Translates to: RLAAGGDHVVLL*TEACGWLLIPV
Trigger: TACCGGGATGAGTAACCAACCACAGGCCTCTGTTCACAAGAGCACGACGTGGTCCCCGCCTGCTGCTAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CCA 72 bp TCAGTGTGGGAAGCAGCATCCGGTGAGGCTGTGCTCTaGCACAGGGGGATCCTGAATCTCCCCATCTCTTCT +
Preference number: 3 (lower is better)
Translates to: SVWEAASGEAVL*HRGILNLPISS
Trigger: AGAAGAGATGGGGAGATTCAGGATCCCCCTGTGCCAGAGCACAGCCTCACCGGATGCTGCTTCCCACACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR GCA 72 bp GTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTaGAGAAGTCCCCTCATCCGGACGCAGGGCTGGGTG +
Preference number: 3 (lower is better)
Translates to: VVSVHQPRFCHL*RSPLIRTQGWV
Trigger: CACCCAGCCCTGCGTCCGGATGAGGGGACTTCTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR TCA 72 bp CACACACAAACACAACAGTTTCTGGGGTCCTTCCGCTaGAGTGTGCTATGGATGTTGGGAGGCCCCCAGTGG +
Preference number: 3 (lower is better)
Translates to: HTQTQQFLGSFR*SVLWMLGGPQW
Trigger: CCACTGGGGGCCTCCCAACATCCATAGCACACTTCAGCGGAAGGACCCCAGAAACTGTTGTGTTTGTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR TCA 72 bp AGTCCCCTCATCCGGACGCAGGGCTGGGTGACGAGGTaGAATGACACACTAGGTCATCAGCACACACAAACA +
Preference number: 3 (lower is better)
Translates to: SPLIRTQGWVTR*NDTLGHQHTQT
Trigger: TGTTTGTGTGTGCTGATGACCTAGTGTGTCATTTCACCTCGTCACCCAGCCCTGCGTCCGGATGAGGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR GCA 72 bp AAACACAACAGTTTCTGGGGTCCTTCCGCTGAAGTGTaGTATGGATGTTGGGAGGCCCCCAGTGGCAGACAG +
Preference number: 3 (lower is better)
Translates to: KHNSFWGPSAEV*YGCWEAPSGRQ
Trigger: CTGTCTGCCACTGGGGGCCTCCCAACATCCATAGCACACTTCAGCGGAAGGACCCCAGAAACTGTTGTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CCA 72 bp GTCACTGTAAATGTGACAACCGTGAAAGGGGACACCTaGGGCAATCCTTCACAGGCCAGCCTGGAATCAGGG +
Preference number: 3 (lower is better)
Translates to: VTVNVTTVKGDT*GNPSQASLESG
Trigger: CCCTGATTCCAGGCTGGCCTGTGAAGGATTGCCCCAGGTGTCCCCTTTCACGGTTGTCACATTTACAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR TCA 72 bp CCTCATCCGGACGCAGGGCTGGGTGACGAGGTGAAATaGCACACTAGGTCATCAGCACACACAAACACAACA +
Preference number: 3 (lower is better)
Translates to: PHPDAGLGDEVK*HTRSSAHTNTT
Trigger: TGTTGTGTTTGTGTGTGCTGATGACCTAGTGTGTCATTTCACCTCGTCACCCAGCCCTGCGTCCGGATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CCA 72 bp AAGGGGACACCTGGGGCAATCCTTCACAGGCCAGCCTaGAATCAGGGACCCAACAGTAGTCTGTTTATGAAG +
Preference number: 3 (lower is better)
Translates to: KGTPGAILHRPA*NQGPNSSLFMK
Trigger: CTTCATAAACAGACTACTGTTGGGTCCCTGATTCCAGGCTGGCCTGTGAAGGATTGCCCCAGGTGTCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CCA 72 bp GCCATTTGTGCTCGCCTGGTCATAAACTCCTGGTCCTaGGAGAGGATGGGGCTTCCCTTAAGGAAAGATGCA +
Preference number: 3 (lower is better)
Translates to: AICARLVINSWS*ERMGLPLRKDA
Trigger: TGCATCTTTCCTTAAGGGAAGCCCCATCCTCTCCCAGGACCAGGAGTTTATGACCAGGCGAGCACAAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CCA 72 bp AGCCTGTGGCTGGGGAATTGTCCTCAGGAAGTAAAATaGCTCGCCAGCTTTCCTACCTGCTTGTGGATGCCT +
Preference number: 3 (lower is better)
Translates to: SLWLGNCPQEVK*LASFPTCLWMP
Trigger: AGGCATCCACAAGCAGGTAGGAAAGCTGGCGAGCCATTTTACTTCCTGAGGACAATTCCCCAGCCACAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CCA 72 bp CGGGGACCACGTCGTGCTCTTGTGAACAGAGGCCTGTaGTTGGTTACTCATCCCGGTAAACCAAAGGCATTA +
Preference number: 3 (lower is better)
Translates to: RGPRRALVNRGL*LVTHPGKPKAL
Trigger: TAATGCCTTTGGTTTACCGGGATGAGTAACCAACCACAGGCCTCTGTTCACAAGAGCACGACGTGGTCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR TCA 72 bp TTTAGGCTGTGGAAAACTGGCCTCCAAACTCTGCAGTaGCAACACAAGATGGCCGTGAAGCAAGCCTGGCAC +
Preference number: 3 (lower is better)
Translates to: FRLWKTGLQTLQ*QHKMAVKQAWH
Trigger: GTGCCAGGCTTGCTTCACGGCCATCTTGTGTTGTCACTGCAGAGTTTGGAGGCCAGTTTTCCACAGCCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR GCA 72 bp CCTCAGGAAGTAAAATGGCTCGCCAGCTTTCCTACCTaGTTGTGGATGCCTCAGATAGCAATGGTCGGACAG +
Preference number: 3 (lower is better)
Translates to: PQEVKWLASFPT*LWMPQIAMVGQ
Trigger: CTGTCCGACCATTGCTATCTGAGGCATCCACAAGCAGGTAGGAAAGCTGGCGAGCCATTTTACTTCCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CAA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGAATGGGGGCTGTTTTTaGGCTGGTCTGAGTGCAGGA +
Preference number: 3 (lower is better)
Translates to: GGESCSICPPAEILSFVQNGGCF*AGLSAG
Trigger: TCCTGCACTCAGACCAGCCAAAAAACAGCCCCCATT...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CAA 90 bp ACAAACACAACAGTTTCTGGGGTCCTTCCGCTGAAGTGTGCTATGGATGTTGGGGCCATGTGCAGGGCTTaGCCACAGAAACACCAACAT +
Preference number: 3 (lower is better)
Translates to: TNTTVSGVLPLKCAMDVGAMCRA*PQKHQH
Trigger: ATGTTGGTGTTTCTGTGGCAAAGCCCTGCACATGGC...CCCAACATCCATAGCACACTTCAGCGGAAGGACCCCAGAAACTGTTGTGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CCA 72 bp ACCAGCTGGGTGACTCTAAACATGTCACCTCCCCTCTaGCCTCAACTTTCTCATCGACAAAACGAAGGAGAG +
Preference number: 3 (lower is better)
Translates to: TSWVTLNMSPPL*PQLSHRQNEGE
Trigger: CTCTCCTTCGTTTTGTCGATGAGAAAGTTGAGGCCAGAGGGGAGGTGACATGTTTAGAGTCACCCAGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CCA 72 bp GAAGTAAAATGGCTCGCCAGCTTTCCTACCTGCTTGTaGATGCCTCAGATAGCAATGGTCGGACAGGACACT +
Preference number: 3 (lower is better)
Translates to: EVKWLASFPTCL*MPQIAMVGQDT
Trigger: AGTGTCCTGTCCGACCATTGCTATCTGAGGCATCCACAAGCAGGTAGGAAAGCTGGCGAGCCATTTTACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR TCA 72 bp CTTGACCAGGGATCATTTTGCACCCGATGGGATATTTaGCAATATCTGGAGACACGCTGGGTGGGGAATAGG +
Preference number: 3 (lower is better)
Translates to: LDQGSFCTRWDI*QYLETRWVGNR
Trigger: CCTATTCCCCACCCAGCGTGTCTCCAGATATTGTCAAATATCCCATCGGGTGCAAAATGATCCCTGGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CCA 72 bp GATGTTGTGATGCCAATCTCACCCAAAGGTCTAATCTaGGAGAGACAAAGAGAAGCCCACTGGGATGACTGG +
Preference number: 3 (lower is better)
Translates to: DVVMPISPKGLI*ERQREAHWDDW
Trigger: CCAGTCATCCCAGTGGGCTTCTCTTTGTCTCTCCCAGATTAGACCTTTGGGTGAGATTGGCATCACAACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CAA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGAGTCAGGCTTAGTGTTTaGCTGTTTCCCACGAGCCAG +
Preference number: 3 (lower is better)
Translates to: NSIACKAETRRSPEEICRVRLSV*LFPTSQ
Trigger: CTGGCTCGTGGGAAACAGCAAAACACTAAGCCTGAC...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CAA 90 bp ACAAACACAACAGTTTCTGGGGTCCTTCCGCTGAAGTGTGCTATGGATGTTGGGCAAAAACATATTTCTTaGGGAAGCTGGAGGAGCACT +
Preference number: 3 (lower is better)
Translates to: TNTTVSGVLPLKCAMDVGQKHIS*GSWRST
Trigger: AGTGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTG...CCCAACATCCATAGCACACTTCAGCGGAAGGACCCCAGAAACTGTTGTGTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CAA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGATCTGGTCTTCCCAATTaGGGAGAGGTCAGGCTTAGT +
Preference number: 3 (lower is better)
Translates to: NSIACKAETRRSPEEICRSGLPN*GEVRLS
Trigger: ACTAAGCCTGACCTCTCCCAAATTGGGAAGACCAGA...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CAA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGTTACCAAATAGAAATTaGACTCAGAGCCTGTGGCTG +
Preference number: 3 (lower is better)
Translates to: GGESCSICPPAEILSFVQLPNRN*TQSLWL
Trigger: CAGCCACAGGCTCTGAGTCAAATTTCTATTTGGTAA...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR GCA 72 bp TCTAGAAGGAATGGGCATTCCAAATGGGGACAGTTTTaGACTTTCTCCTCTGGTCTTCCCAATTTGGGAGAG +
Preference number: 3 (lower is better)
Translates to: SRRNGHSKWGQF*TFSSGLPNLGE
Trigger: CTCTCCCAAATTGGGAAGACCAGAGGAGAAAGTGCAAAACTGTCCCCATTTGGAATGCCCATTCCTTCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CCA 72 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTaGGAAGCTGGAGGAGCACTCCCTGTTCTCTCCCCA +
Preference number: 3 (lower is better)
Translates to: AHVPTTYKNIFL*EAGGALPVLSP
Trigger: TGGGGAGAGAACAGGGAGTGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR CCA 72 bp GACAGTTTTGCACTTTCTCCTCTGGTCTTCCCAATTTaGGAGAGGTCAGGCTTAGTGTTTTGCTGTTTCCCA +
Preference number: 3 (lower is better)
Translates to: DSFALSPLVFPI*ERSGLVFCCFP
Trigger: TGGGAAACAGCAAAACACTAAGCCTGACCTCTCCCAAATTGGGAAGACCAGAGGAGAAAGTGCAAAACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CAA 90 bp AGAACTGACTTGTGTCCAGTTTCGGATTTTACACCAAGCAGTCAGTTTCCTATAGTCAGGCTTAGTGTTTaGCTGTTTCCCACGAGCCAG +
Preference number: 3 (lower is better)
Translates to: RTDLCPVSDFTPSSQFPIVRLSV*LFPTSQ
Trigger: CTGGCTCGTGGGAAACAGCAAAACACTAAGCCTGAC...TATAGGAAACTGACTGCTTGGTGTAAAATCCGAAACTGGACACAAGTCAGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CAA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGACAAATGGGGACAGTTTaGCACTTTCTCCTCTGGTCT +
Preference number: 3 (lower is better)
Translates to: NSIACKAETRRSPEEICRQMGTV*HFLLWS
Trigger: AGACCAGAGGAGAAAGTGCAAAACTGTCCCCATTTG...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR TCA 72 bp GGGTCACTAGAAATAAAGAATGTATCCACAGGCTGGTaGGGATGCTTACAATTTTCTGGGGAGCAGAGATGC +
Preference number: 3 (lower is better)
Translates to: GSLEIKNVSTGW*GCLQFSGEQRC
Trigger: GCATCTCTGCTCCCCAGAAAATTGTAAGCATCCTCACCAGCCTGTGGATACATTCTTTATTTCTAGTGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR TCA 72 bp GAATTACCCAGTCCAAAATGTCAATGGTGTCAAGGTTaGGAAACCCTGGTCTCAGGTAACTTGGGCCATTCT +
Preference number: 3 (lower is better)
Translates to: ELPSPKCQWCQG*ETLVSGNLGHS
Trigger: AGAATGGCCCAAGTTACCTGAGACCAGGGTTTCTCAACCTTGACACCATTGACATTTTGGACTGGGTAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR TCA 72 bp GTCATTGTGACCTGTAACATCTTGGGCAACAGATCTTaGCCAGGGATCATTTTGCACCCGATGGGATATTTG +
Preference number: 3 (lower is better)
Translates to: VIVTCNILGNRS*PGIILHPMGYL
Trigger: CAAATATCCCATCGGGTGCAAAATGATCCCTGGTCAAGATCTGTTGCCCAAGATGTTACAGGTCACAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR GCA 72 bp ACAGGAAGAAATATGGACACAATGTCACCTGCCTCTTaGAAGGCTCTAGGAGAGATGCTTTCACAGGGTAAA +
Preference number: 3 (lower is better)
Translates to: TGRNMDTMSPAS*KALGEMLSQGK
Trigger: TTTACCCTGTGAAAGCATCTCTCCTAGAGCCTTGCAAGAGGCAGGTGACATTGTGTCCATATTTCTTCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CCA 72 bp TCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTaGAGGAGCACTCCCTGTTCTCTCCCCAGTGAAACA +
Preference number: 3 (lower is better)
Translates to: SYHLQKHISLGS*RSTPCSLPSET
Trigger: TGTTTCACTGGGGAGAGAACAGGGAGTGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR CAA 90 bp TTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAACCTTTCCCGAGGAATaGTGGGCTGCACATCTGAAG +
Preference number: 3 (lower is better)
Translates to: LCAHVPTTYKNIFLWEAGTFPEE*WAAHLK
Trigger: CTTCAGATGTGCAGCCCACAATTCCTCGGGAAAGGT...TCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR GCA 72 bp GCTTACAAAAGGGCTCACAGTTCTGAGGCAGCCTTTTaGACTGCATACCCTACATGCAACATCTTAAAGATT +
Preference number: 3 (lower is better)
Translates to: AYKRAHSSEAAF*TAYPTCNILKI
Trigger: AATCTTTAAGATGTTGCATGTAGGGTATGCAGTGCAAAAGGCTGCCTCAGAACTGTGAGCCCTTTTGTAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CAA 90 bp TCATTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTACCTTTCCCGAGGAATaGTGGGCTGCACATCTGAAG +
Preference number: 3 (lower is better)
Translates to: SLCKPDKCALSFEWKRKSTFPEE*WAAHLK
Trigger: CTTCAGATGTGCAGCCCACAATTCCTCGGGAAAGGT...AGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CAA 90 bp AGAACTGACTTGTGTCCAGTTTCGGATTTTACACCAAGCAGTCAGTTTCCTATACACCCGATGGGATATTaGACAATATCTGGAGACACG +
Preference number: 3 (lower is better)
Translates to: RTDLCPVSDFTPSSQFPIHPMGY*TISGDT
Trigger: CGTGTCTCCAGATATTGTCAAATATCCCATCGGGTG...TATAGGAAACTGACTGCTTGGTGTAAAATCCGAAACTGGACACAAGTCAGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CAA 90 bp TCATTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTGCCATGTGCAGGGCTTaGCCACAGAAACACCAACAT +
Preference number: 3 (lower is better)
Translates to: SLCKPDKCALSFEWKRKSAMCRA*PQKHQH
Trigger: ATGTTGGTGTTTCTGTGGCAAAGCCCTGCACATGGC...AGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CAA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAACCGAGATTCTGTCATTaGTGCAGAAGTCCCCTCATC +
Preference number: 3 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKPRFCH*CRSPLI
Trigger: GATGAGGGGACTTCTGCACAAATGACAGAATCTCGG...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR TCA 72 bp GGTAACTTGGGCCATTCTGGGGTTCTAGAACATGTGTaGATAAGTCCTTGTTTTATTCTCAGCCTCTATGAG +
Preference number: 3 (lower is better)
Translates to: GNLGHSGVLEHV*ISPCFILSLYE
Trigger: CTCATAGAGGCTGAGAATAAAACAAGGACTTATTCACACATGTTCTAGAACCCCAGAATGGCCCAAGTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR TCA 72 bp TGTCATTTGAATGGAAAAGAAAGTCTCCACAGAGACTaGACACGAACACAAGGAGGAGGAGAAAGCTGTAGT +
Preference number: 3 (lower is better)
Translates to: CHLNGKESLHRD*TRTQGGGESCS
Trigger: ACTACAGCTTTCTCCTCCTCCTTGTGTTCGTGTTCAGTCTCTGTGGAGACTTTCTTTTCCATTCAAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CAA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTACCTTTCCCGAGGAATaGTGGGCTGCACATCTGAAG +
Preference number: 3 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFTFPEE*WAAHLK
Trigger: CTTCAGATGTGCAGCCCACAATTCCTCGGGAAAGGT...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR CAA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGACAGTATTTTTGTGCTTaGGAAAGGAAATCCCAAGAG +
Preference number: 3 (lower is better)
Translates to: NSIACKAETRRSPEEICRQYFCA*ERKSQE
Trigger: CTCTTGGGATTTCCTTTCCAAAGCACAAAAATACTG...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR TCA 72 bp AAAGTTGAATCTCTCCTGGCAAAAGAATCTCCCAAATaGGCCTATTTGAAAAGGTCAGAGATAGGTAGCTGG +
Preference number: 3 (lower is better)
Translates to: KVESLLAKESPK*AYLKRSEIGSW
Trigger: CCAGCTACCTATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGATTCAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR TCA 72 bp GGCACTGCTTACGGGAACACTTTGGCAGCTCTGAATTaGAAACTTCCTACAAAAGTAACAGTAGTAAGAGAA +
Preference number: 3 (lower is better)
Translates to: GTAYGNTLAALN*KLPTKVTVVRE
Trigger: TTCTCTTACTACTGTTACTTTTGTAGGAAGTTTTCAATTCAGAGCTGCCAAAGTGTTCCCGTAAGCAGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR TCA 72 bp TTAAAGAGTTGCCCCTTTGAGGGCTGGAACATTCTTTaGAAATGCCAAATTGTGAATGGTGCTCTTTGGAAG +
Preference number: 3 (lower is better)
Translates to: LKSCPFEGWNIL*KCQIVNGALWK
Trigger: CTTCCAAAGAGCACCATTCACAATTTGGCATTTTCAAAGAATGTTCCAGCCCTCAAAGGGGCAACTCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR GCA 72 bp AATAACTCAAAACATCTGGCCACATCAAACCAACTCTaGCTGGGCAATGCTCTGGAATACTTAGATTGGAAA +
Preference number: 3 (lower is better)
Translates to: NNSKHLATSNQL*LGNALEYLDWK
Trigger: TTTCCAATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTTGAGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR CAA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATCAGATTCTGTATACTTaGCATCTCACAGTGCAGTAT +
Preference number: 3 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDQILYT*HLTVQY
Trigger: ATACTGCACTGTGAGATGCAAAGTATACAGAATCTG...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR CAA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGCAGATTCTGTATACTTaGCATCTCACAGTGCAGTAT +
Preference number: 3 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLEQILYT*HLTVQY
Trigger: ATACTGCACTGTGAGATGCAAAGTATACAGAATCTG...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR CAA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAACAAAAACATATTTCTTaGGGAAGCTGGAGGAGCACT +
Preference number: 3 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKQKHIS*GSWRST
Trigger: AGTGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTG...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CAA 90 bp AAGTTGCAACCTTTTGTTTTGGTATATACATTTGAGTGTGGTGAAAGAACTGACCTTGGGCAACAGATCTaGACCAGGGATCATTTTGCA +
Preference number: 3 (lower is better)
Translates to: KLQPFVLVYTFECGERTDLGQQI*TRDHFA
Trigger: TGCAAAATGATCCCTGGTCAAGATCTGTTGCCCAAG...GTCAGTTCTTTCACCACACTCAAATGTATATACCAAAACAAAAGGTTGCAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR GCA 72 bp ATGAAATTTTCTCCCAGCCACAGATTCTGTATACTTTaGATCTCACAGTGCAGTATTCCGTATTCATGCCAA +
Preference number: 3 (lower is better)
Translates to: MKFSPSHRFCIL*ISQCSIPYSCQ
Trigger: TTGGCATGAATACGGAATACTGCACTGTGAGATGCAAAGTATACAGAATCTGTGGCTGGGAGAAAATTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR-3UTR CAA 90 bp TCATTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTGGTGAAAGAACTGACTaGTGTCCAGTTTCGGATTTT +
Preference number: 3 (lower is better)
Translates to: SLCKPDKCALSFEWKRKSGERTD*CPVSDF
Trigger: AAAATCCGAAACTGGACACAAGTCAGTTCTTTCACC...AGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR TCA 72 bp CTCTTAAACCTAAGTCAAACAAGTACTGTAACTTACTaGGAGACGCTAAAGAAATGGATGTGCTTCAAGAGG +
Preference number: 3 (lower is better)
Translates to: LLNLSQTSTVTY*ETLKKWMCFKR
Trigger: CCTCTTGAAGCACATCCATTTCTTTAGCGTCTCTCAGTAAGTTACAGTACTTGTTTGACTTAGGTTTAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
3UTR GCA 72 bp AGCACATTCATACACAATACTCGGAGTCAACATGTTTaGCCTAAGAAGAACACTTCAATTTTAACGACCCTA +
Preference number: 3 (lower is better)
Translates to: STFIHNTRSQHV*PKKNTSILTTL
Trigger: TAGGGTCGTTAAAATTGAAGTGTTCTTCTTAGGGCAAACATGTTGACTCCGAGTATTGTGTATGAATGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR-3UTR CAA 90 bp AAGTTGCAACCTTTTGTTTTGGTATATACATTTGAGTGTGGTGAAAGAACTGACTTTGGCAGCTCTGAATaGAAAACTTCCTACAAAAGT +
Preference number: 3 (lower is better)
Translates to: KLQPFVLVYTFECGERTDFGSSE*KTSYKS
Trigger: ACTTTTGTAGGAAGTTTTCAATTCAGAGCTGCCAAA...GTCAGTTCTTTCACCACACTCAAATGTATATACCAAAACAAAAGGTTGCAACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GGGGACACCTGGGGCAATCCTTCACAGGCCAGCCTGGAATCAGGGACCCAACAGGTGGCCGAGACGATCTaGGCTGAGGACATGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GDTWGNPSQASLESGTQQVAETI*AEDMAA
Trigger: GGCGGCCATGTCCTCAGCCCAGATCGTCTCGGCCAC...CTGTTGGGTCCCTGATTCCAGGCTGGCCTGTGAAGGATTGCCCCAGGTGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp GGGGACACCTGGGGCAATCCTTCACAGGCCAGCCTGGAATCAGGGACCCAACAGATGGCCGCCATGTGCTaGAGGGCCTTATCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: GDTWGNPSQASLESGTQQMAAMC*RALSFA
Trigger: TGCAAAGGATAAGGCCCTGCAGCACATGGCGGCCAT...CTGTTGGGTCCCTGATTCCAGGCTGGCCTGTGAAGGATTGCCCCAGGTGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGCCCCGCCGCGCGGAATaGCCCGCAGGGTGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: GGESCSICPPAEILSFVQPRRAE*PAGWKR
Trigger: TCGCTTCCACCCTGCGGGCCATTCCGCGCGGCGGGG...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527636.7
CDS-3UTR GCA 90 bp GGGGACACCTGGGGCAATCCTTCACAGGCCAGCCTGGAATCAGGGACCCAACAGACATGTGTGAGAATTTaGCCACGCCCACCCCCATCT +
Preference number: 4 (lower is better)
Translates to: GDTWGNPSQASLESGTQQTCVRI*PRPPPS
Trigger: AGATGGGGGTGGGCGTGGGCAAATTCTCACACATGT...CTGTTGGGTCCCTGATTCCAGGCTGGCCTGTGAAGGATTGCCCCAGGTGTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATGCTTCCCCCGCCCTCTaGTCGGTGCCCGGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDASPAL*SVPGSL
Trigger: GAGGGAGCCGGGCACCGAGCAGAGGGCGGGGGAAGC...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527636.7
CDS-3UTR TCA 90 bp GGGGACACCTGGGGCAATCCTTCACAGGCCAGCCTGGAATCAGGGACCCAACAGACCCGATGGGATATTTaGCAATATCTGGAGACACGC +
Preference number: 4 (lower is better)
Translates to: GDTWGNPSQASLESGTQQTRWDI*QYLETR
Trigger: GCGTGTCTCCAGATATTGTCAAATATCCCATCGGGT...CTGTTGGGTCCCTGATTCCAGGCTGGCCTGTGAAGGATTGCCCCAGGTGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp GGGGACACCTGGGGCAATCCTTCACAGGCCAGCCTGGAATCAGGGACCCAACAGAGATTCTGTCATTTGTaGAGAAGTCCCCTCATCCGG +
Preference number: 4 (lower is better)
Translates to: GDTWGNPSQASLESGTQQRFCHL*RSPLIR
Trigger: CCGGATGAGGGGACTTCTGCACAAATGACAGAATCT...CTGTTGGGTCCCTGATTCCAGGCTGGCCTGTGAAGGATTGCCCCAGGTGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGAGCGAGTCTGCAAAGTaGTTGGTGGGCGCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: GGESCSICPPAEILSFVQSESAK*LVGARG
Trigger: GCCGCGGGCGCCCACCAAGCACTTTGCAGACTCGCT...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527636.7
CDS-3UTR CCA 90 bp GGGGACACCTGGGGCAATCCTTCACAGGCCAGCCTGGAATCAGGGACCCAACAGAAACACAACAGTTTCTaGGGTCCTTCCGCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: GDTWGNPSQASLESGTQQKHNSF*GPSAEV
Trigger: CACTTCAGCGGAAGGACCCCAGAAACTGTTGTGTTT...CTGTTGGGTCCCTGATTCCAGGCTGGCCTGTGAAGGATTGCCCCAGGTGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CAA 72 bp GCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTaGTGCAGAAGTCCCCTCATCCGGACGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AVVSVHQPRFCH*CRSPLIRTQGW
Trigger: CCAGCCCTGCGTCCGGATGAGGGGACTTCTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GGGGACACCTGGGGCAATCCTTCACAGGCCAGCCTGGAATCAGGGACCCAACAGGACTGCCATACAGAATaGAGGACAAAAGACAGACTC +
Preference number: 4 (lower is better)
Translates to: GDTWGNPSQASLESGTQQDCHTE*RTKDRL
Trigger: GAGTCTGTCTTTTGTCCTTCATTCTGTATGGCAGTC...CTGTTGGGTCCCTGATTCCAGGCTGGCCTGTGAAGGATTGCCCCAGGTGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GGGGACACCTGGGGCAATCCTTCACAGGCCAGCCTGGAATCAGGGACCCAACAGCAAATGTGGTCATTGTaGCCTGTAACATCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GDTWGNPSQASLESGTQQQMWSL*PVTSWA
Trigger: TGCCCAAGATGTTACAGGTCACAATGACCACATTTG...CTGTTGGGTCCCTGATTCCAGGCTGGCCTGTGAAGGATTGCCCCAGGTGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TTAGTGTTTTGCTGTTTCCCACGAGCCAGCCACATCCTCATGTTAGGGACCACAGGAAGCAGCATCCGGTaGGGCTGTGCTCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: LVFCCFPRASHILMLGTTGSSIR*GCALAQ
Trigger: CTGTGCCAGAGCACAGCCTCACCGGATGCTGCTTCC...TGTGGTCCCTAACATGAGGATGTGGCTGGCTCGTGGGAAACAGCAAAACACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GGGGACACCTGGGGCAATCCTTCACAGGCCAGCCTGGAATCAGGGACCCAACAGTACCAAATAGAAATTTaGCTCAGAGCCTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GDTWGNPSQASLESGTQQYQIEI*LRACGW
Trigger: CCAGCCACAGGCTCTGAGTCAAATTTCTATTTGGTA...CTGTTGGGTCCCTGATTCCAGGCTGGCCTGTGAAGGATTGCCCCAGGTGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp GGGGACACCTGGGGCAATCCTTCACAGGCCAGCCTGGAATCAGGGACCCAACAGGTAAATCTCCTACAGTaGAAAGGACAGCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GDTWGNPSQASLESGTQQVNLLQ*KGQLCR
Trigger: TCTGCAGAGCTGTCCTTTGCACTGTAGGAGATTTAC...CTGTTGGGTCCCTGATTCCAGGCTGGCCTGTGAAGGATTGCCCCAGGTGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GGGGACACCTGGGGCAATCCTTCACAGGCCAGCCTGGAATCAGGGACCCAACAGTTTCCTACCTGCTTGTaGATGCCTCAGATAGCAATG +
Preference number: 4 (lower is better)
Translates to: GDTWGNPSQASLESGTQQFPTCL*MPQIAM
Trigger: CATTGCTATCTGAGGCATCCACAAGCAGGTAGGAAA...CTGTTGGGTCCCTGATTCCAGGCTGGCCTGTGAAGGATTGCCCCAGGTGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCCGGCAGGGCTCTCACTaGCGCTCCAGCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ALPVLSPVKHLREITQNIRQGSH*RSSCWA
Trigger: AGCCCAGCAGCTGGAGCGGCAGTGAGAGCCCTGCCG...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp ACAAACACAACAGTTTCTGGGGTCCTTCCGCTGAAGTGTGCTATGGATGTTGGGGCGGGGACCACGTCGTaGTCTTGTGAACAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: TNTTVSGVLPLKCAMDVGAGTTS*SCEQRP
Trigger: AGGCCTCTGTTCACAAGAGCACGACGTGGTCCCCGC...CCCAACATCCATAGCACACTTCAGCGGAAGGACCCCAGAAACTGTTGTGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp ACAAACACAACAGTTTCTGGGGTCCTTCCGCTGAAGTGTGCTATGGATGTTGGGTGCAGGCTCAAACCCTaGAATGGGGGCTGTGACCGC +
Preference number: 4 (lower is better)
Translates to: TNTTVSGVLPLKCAMDVGCRLKP*NGGCDR
Trigger: GCGGTCACAGCCCCCATTCCAGGGTTTGAGCCTGCA...CCCAACATCCATAGCACACTTCAGCGGAAGGACCCCAGAAACTGTTGTGTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATGCCGTGAAGCAAGCCTaGCACCAGAGGGTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDAVKQA*HQRVSR
Trigger: CCTCGAGACCCTCTGGTGCCAGGCTTGCTTCACGGC...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CAA 72 bp GGACCACGTCGTGCTCTTGTGAACAGAGGCCTGTGGTaGGTTACTCATCCCGGTAAACCAAAGGCATTACGG +
Preference number: 4 (lower is better)
Translates to: GPRRALVNRGLW*VTHPGKPKALR
Trigger: CCGTAATGCCTTTGGTTTACCGGGATGAGTAACCAACCACAGGCCTCTGTTCACAAGAGCACGACGTGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp ACAAACACAACAGTTTCTGGGGTCCTTCCGCTGAAGTGTGCTATGGATGTTGGGCACGTCGTGCTCTTGTaGACAGAGGCCTGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: TNTTVSGVLPLKCAMDVGHVVLL*TEACGW
Trigger: CCAACCACAGGCCTCTGTTCACAAGAGCACGACGTG...CCCAACATCCATAGCACACTTCAGCGGAAGGACCCCAGAAACTGTTGTGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GGGGACACCTGGGGCAATCCTTCACAGGCCAGCCTGGAATCAGGGACCCAACAGAAGTCATTTAGAATGTaGACAAACACACGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: GDTWGNPSQASLESGTQQKSFRM*TNTRGE
Trigger: TTCGCCACGTGTGTTTGTTCACATTCTAAATGACTT...CTGTTGGGTCCCTGATTCCAGGCTGGCCTGTGAAGGATTGCCCCAGGTGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp GAGAAGCCCACTGGGATGACTGGACCAGTGGTTAAGACAGGGAAAATATCTGTCGGCGAAGCTTGGTTGTaGCAATGGAGCGACCTTGCC +
Preference number: 4 (lower is better)
Translates to: EKPTGMTGPVVKTGKISVGEAWL*QWSDLA
Trigger: GGCAAGGTCGCTCCATTGGCACAACCAAGCTTCGCC...GACAGATATTTTCCCTGTCTTAACCACTGGTCCAGTCATCCCAGTGGGCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTCATCCGGTGAGGCTGTaGTCTGGCACAGGGGGATCC +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILHPVRL*SGTGGS
Trigger: GGATCCCCCTGTGCCAGAGCACAGCCTCACCGGATG...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GATGCAGGAAATAAGAGCAAAAGAAACATCCCTAAGAGGGGTGTTCAACAGAAGGGGGGCTGTGACCGCTaGCTGGATGGGGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: DAGNKSKRNIPKRGVQQKGGCDR*LDGVGL
Trigger: CAGGCCTACCCCATCCAGCCAGCGGTCACAGCCCCC...CTTCTGTTGAACACCCCTCTTAGGGATGTTTCTTTTGCTCTTATTTCCTGCATC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATTGCAGGCTCAAACCCTaGAATGGGGGCTGTGACCGC +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDCRLKP*NGGCDR
Trigger: GCGGTCACAGCCCCCATTCCAGGGTTTGAGCCTGCA...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp AGATTAGATGTTGTGATGCCAATCTCACCCAAAGGTCTAATCTGGGAGAGACAAAGTCTGCAAAGTGCTTaGTGGGCGCCCGCGGCGGGC +
Preference number: 4 (lower is better)
Translates to: RLDVVMPISPKGLIWERQSLQSA*WAPAAG
Trigger: GCCCGCCGCGGGCGCCCACCAAGCACTTTGCAGACT...TTGTCTCTCCCAGATTAGACCTTTGGGTGAGATTGGCATCACAACATCTAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527636.7
CDS-3UTR TCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATAGCCCCAGCTTGTTATaGATGGCAGTGGCCGAGACG +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDSPSLL*MAVAET
Trigger: CGTCTCGGCCACTGCCATTCATAACAAGCTGGGGCT...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCACTGGAATGGGGGCTGTaGCCGCTGGCTGGATGGGGT +
Preference number: 4 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGALEWGL*PLAGWG
Trigger: ACCCCATCCAGCCAGCGGTCACAGCCCCCATTCCAG...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATGGTCAAAGCAGGTGTTaGGACAGGGAAGGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDGQSRC*DREGGV
Trigger: CACACCCCCTTCCCTGTCTCAACACCTGCTTTGACC...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp GAGAAGCCCACTGGGATGACTGGACCAGTGGTTAAGACAGGGAAAATATCTGTCGGCACAGGGGGATCCTaGATCTCCCCATCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: EKPTGMTGPVVKTGKISVGTGGS*ISPSLL
Trigger: TAGAAGAGATGGGGAGATTCAGGATCCCCCTGTGCC...GACAGATATTTTCCCTGTCTTAACCACTGGTCCAGTCATCCCAGTGGGCTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp ACAAACACAACAGTTTCTGGGGTCCTTCCGCTGAAGTGTGCTATGGATGTTGGGCTGGGGTCCTTCCGCTaGAGTGTGCTATGGATGTTG +
Preference number: 4 (lower is better)
Translates to: TNTTVSGVLPLKCAMDVGLGSFR*SVLWML
Trigger: CAACATCCATAGCACACTTCAGCGGAAGGACCCCAG...CCCAACATCCATAGCACACTTCAGCGGAAGGACCCCAGAAACTGTTGTGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTCACTGCCGCTCCAGCTaGTGGGCTCAATTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILHCRSS*WAQFWR
Trigger: CCGCCAAAATTGAGCCCAGCAGCTGGAGCGGCAGTG...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGTCACTGCATGGCCTGTaGCTGGACGCGGCCGCCCCG +
Preference number: 4 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTSLHGL*LDAAAP
Trigger: CGGGGCGGCCGCGTCCAGGCACAGGCCATGCAGTGA...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527636.7
CDS-3UTR CCA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGATCTGGGCTGAGGACATaGCCGCCATGTGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: NSIACKAETRRSPEEICRSGLRT*PPCAAG
Trigger: CCCTGCAGCACATGGCGGCCATGTCCTCAGCCCAGA...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGGGGGCTGTGACCGCTaGCTGGATGGGGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLEGGCDR*LDGVGL
Trigger: CAGGCCTACCCCATCCAGCCAGCGGTCACAGCCCCC...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp AGAACTGACTTGTGTCCAGTTTCGGATTTTACACCAAGCAGTCAGTTTCCTATAGGGGGCTGTGACCGCTaGCTGGATGGGGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RTDLCPVSDFTPSSQFPIGGCDR*LDGVGL
Trigger: CAGGCCTACCCCATCCAGCCAGCGGTCACAGCCCCC...TATAGGAAACTGACTGCTTGGTGTAAAATCCGAAACTGGACACAAGTCAGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATGCTTGGTTGTGCCAATaGAGCGACCTTGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDAWLCQ*SDLARQ
Trigger: CTGCCTGGCAAGGTCGCTCCATTGGCACAACCAAGC...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATCCACCAGGCGAAGCTTaGTTGTGCCAATGGAGCGAC +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDPPGEA*LCQWSD
Trigger: GTCGCTCCATTGGCACAACCAAGCTTCGCCTGGTGG...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp ACAAACACAACAGTTTCTGGGGTCCTTCCGCTGAAGTGTGCTATGGATGTTGGGCTTCACAGGCCAGCCTaGAATCAGGGACCCAACAGT +
Preference number: 4 (lower is better)
Translates to: TNTTVSGVLPLKCAMDVGLHRPA*NQGPNS
Trigger: ACTGTTGGGTCCCTGATTCCAGGCTGGCCTGTGAAG...CCCAACATCCATAGCACACTTCAGCGGAAGGACCCCAGAAACTGTTGTGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGCTTCACAGGCCAGCCTaGAATCAGGGACCCAACAGT +
Preference number: 4 (lower is better)
Translates to: GGESCSICPPAEILSFVQLHRPA*NQGPNS
Trigger: ACTGTTGGGTCCCTGATTCCAGGCTGGCCTGTGAAG...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTGTGAGGTCAGCAGACTaGGCTGTCCCCGTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILVRSAD*AVPVSV
Trigger: CACAGAGACGGGGACAGCCCAGTCTGCTGACCTCAC...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp TCATTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCTGCAAAGTGCTTGGTaGGCGCCCGCGGCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: SLCKPDKCALSFEWKRKSLQSAW*APAAGG
Trigger: GCCGCCCGCCGCGGGCGCCCACCAAGCACTTTGCAG...AGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527636.7
CDS-3UTR TCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTCCTGGCTGCCCTGTTTaGATCATTCCCGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILPGCPV*IIPGQN
Trigger: GTTCTGGCCGGGAATGATTCAAACAGGGCAGCCAGG...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATCTGGAATGGGGGCTGTaGCCGCTGGCTGGATGGGGT +
Preference number: 4 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDLEWGL*PLAGWG
Trigger: ACCCCATCCAGCCAGCGGTCACAGCCCCCATTCCAG...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp TTAGTGTTTTGCTGTTTCCCACGAGCCAGCCACATCCTCATGTTAGGGACCACAACTGCAAAGGCATTCTaGGCAAGAGGATGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LVFCCFPRASHILMLGTTTAKAF*ARGCRW
Trigger: CCACCTGCATCCTCTTGCTCAGAATGCCTTTGCAGT...TGTGGTCCCTAACATGAGGATGTGGCTGGCTCGTGGGAAACAGCAAAACACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGAGGACGCAGGGCTGGGTaGCGAGGTGAAATGACACAC +
Preference number: 4 (lower is better)
Translates to: NSIACKAETRRSPEEICRGRRAG*RGEMTH
Trigger: GTGTGTCATTTCACCTCGTCACCCAGCCCTGCGTCC...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGCGGCAGGGCTCTCACTaGCGCTCCAGCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTRQGSH*RSSCWA
Trigger: AGCCCAGCAGCTGGAGCGGCAGTGAGAGCCCTGCCG...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATATGGCCGCCATGTGCTaGAGGGCCTTATCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDMAAMC*RALSFA
Trigger: TGCAAAGGATAAGGCCCTGCAGCACATGGCGGCCAT...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCGGGAGCTGGGGCCGATaGAGGCTCAAACCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: ALPVLSPVKHLREITQNIGSWGR*RLKPWN
Trigger: ATTCCAGGGTTTGAGCCTGCATCGGCCCCAGCTCCC...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGACCAATGGAGCGACCTTaGCAGGCAGGGACTGAGGGA +
Preference number: 4 (lower is better)
Translates to: NSIACKAETRRSPEEICRPMERP*QAGTEG
Trigger: TCCCTCAGTCCCTGCCTGGCAAGGTCGCTCCATTGG...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp GAGAAGCCCACTGGGATGACTGGACCAGTGGTTAAGACAGGGAAAATATCTGTCCTGTCCCCGTCTCTGTaGCAACAGAGTTGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: EKPTGMTGPVVKTGKISVLSPSL*QQSCPL
Trigger: TAGAGGACAACTCTGTTGGCACAGAGACGGGGACAG...GACAGATATTTTCCCTGTCTTAACCACTGGTCCAGTCATCCCAGTGGGCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp TTAGTGTTTTGCTGTTTCCCACGAGCCAGCCACATCCTCATGTTAGGGACCACAGGACACAATGTCACCTaGCTCTTGCAAGGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: LVFCCFPRASHILMLGTTGHNVT*LLQGSR
Trigger: CCTAGAGCCTTGCAAGAGGCAGGTGACATTGTGTCC...TGTGGTCCCTAACATGAGGATGTGGCTGGCTCGTGGGAAACAGCAAAACACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp GATGCAGGAAATAAGAGCAAAAGAAACATCCCTAAGAGGGGTGTTCAACAGAAGCATCCGGTGAGGCTGTaGTCTGGCACAGGGGGATCC +
Preference number: 4 (lower is better)
Translates to: DAGNKSKRNIPKRGVQQKHPVRL*SGTGGS
Trigger: GGATCCCCCTGTGCCAGAGCACAGCCTCACCGGATG...CTTCTGTTGAACACCCCTCTTAGGGATGTTTCTTTTGCTCTTATTTCCTGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGAGCGGGGACCACGTCGTaGTCTTGTGAACAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: NSIACKAETRRSPEEICRAGTTS*SCEQRP
Trigger: AGGCCTCTGTTCACAAGAGCACGACGTGGTCCCCGC...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGGAACCCCGGCGCCCCTaGGAAGGTCGGGCGTGGAAT +
Preference number: 4 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTEPRRP*EGRAWN
Trigger: ATTCCACGCCCGACCTTCCCAGGGGCGCCGGGGTTC...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTGAACCCCGGCGCCCCTaGGAAGGTCGGGCGTGGAAT +
Preference number: 4 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSEPRRP*EGRAWN
Trigger: ATTCCACGCCCGACCTTCCCAGGGGCGCCGGGGTTC...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTGCTTGGTTGTGCCAATaGAGCGACCTTGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILAWLCQ*SDLARQ
Trigger: CTGCCTGGCAAGGTCGCTCCATTGGCACAACCAAGC...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTGTGAAAGGGGACACCTaGGGCAATCCTTCACAGGCC +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILVKGDT*GNPSQA
Trigger: GGCCTGTGAAGGATTGCCCCAGGTGTCCCCTTTCAC...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCGTGAGGTCAGCAGACTaGGCTGTCCCCGTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: ALPVLSPVKHLREITQNIVRSAD*AVPVSV
Trigger: CACAGAGACGGGGACAGCCCAGTCTGCTGACCTCAC...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp ACAAACACAACAGTTTCTGGGGTCCTTCCGCTGAAGTGTGCTATGGATGTTGGGTTGACTCAGAGCCTGTaGCTGGGGAATTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TNTTVSGVLPLKCAMDVGLTQSL*LGNCPQ
Trigger: CTGAGGACAATTCCCCAGCCACAGGCTCTGAGTCAA...CCCAACATCCATAGCACACTTCAGCGGAAGGACCCCAGAAACTGTTGTGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CAA 72 bp GGTCTTCCCAATTTGGGAGAGGTCAGGCTTAGTGTTTaGCTGTTTCCCACGAGCCAGCCACATCCTCATGTT +
Preference number: 4 (lower is better)
Translates to: GLPNLGEVRLSV*LFPTSQPHPHV
Trigger: AACATGAGGATGTGGCTGGCTCGTGGGAAACAGCAAAACACTAAGCCTGACCTCTCCCAAATTGGGAAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAACTGGAATGGGGGCTGTaGCCGCTGGCTGGATGGGGT +
Preference number: 4 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKLEWGL*PLAGWG
Trigger: ACCCCATCCAGCCAGCGGTCACAGCCCCCATTCCAG...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGACTGGAATGGGGGCTGTaGCCGCTGGCTGGATGGGGT +
Preference number: 4 (lower is better)
Translates to: LCAHVPTTYKNIFLWEAGLEWGL*PLAGWG
Trigger: ACCCCATCCAGCCAGCGGTCACAGCCCCCATTCCAG...TCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp ACAAACACAACAGTTTCTGGGGTCCTTCCGCTGAAGTGTGCTATGGATGTTGGGCTGCTCGAGAAAAGCTaGAAATTCCACCAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: TNTTVSGVLPLKCAMDVGLLEKS*KFHQAK
Trigger: CTTCGCCTGGTGGAATTTTCAGCTTTTCTCGAGCAG...CCCAACATCCATAGCACACTTCAGCGGAAGGACCCCAGAAACTGTTGTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATCTCCAAACTCTGCAGTaGCAACACAAGATGGCCGTG +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDLQTLQ*QHKMAV
Trigger: CACGGCCATCTTGTGTTGTCACTGCAGAGTTTGGAG...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp ACAAACACAACAGTTTCTGGGGTCCTTCCGCTGAAGTGTGCTATGGATGTTGGGGGTGACGAGGTGAAATaGCACACTAGGTCATCAGCA +
Preference number: 4 (lower is better)
Translates to: TNTTVSGVLPLKCAMDVGGDEVK*HTRSSA
Trigger: TGCTGATGACCTAGTGTGTCATTTCACCTCGTCACC...CCCAACATCCATAGCACACTTCAGCGGAAGGACCCCAGAAACTGTTGTGTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTATGGCCGCCATGTGCTaGAGGGCCTTATCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILMAAMC*RALSFA
Trigger: TGCAAAGGATAAGGCCCTGCAGCACATGGCGGCCAT...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCAGGGAGCTGGGGCCGATaGAGGCTCAAACCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGAGSWGR*RLKPWN
Trigger: ATTCCAGGGTTTGAGCCTGCATCGGCCCCAGCTCCC...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGATGTCACCTGCCTCTTaGAAGGCTCTAGGAGAGATG +
Preference number: 4 (lower is better)
Translates to: GGESCSICPPAEILSFVQMSPAS*KALGEM
Trigger: CATCTCTCCTAGAGCCTTGCAAGAGGCAGGTGACAT...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp TTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCAGTGGCCGAGACGATCTaGGCTGAGGACATGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LCKPDKCALSFEWKRKSPVAETI*AEDMAA
Trigger: GGCGGCCATGTCCTCAGCCCAGATCGTCTCGGCCAC...TGGAGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GATGCAGGAAATAAGAGCAAAAGAAACATCCCTAAGAGGGGTGTTCAACAGAAGTGCAGGCTCAAACCCTaGAATGGGGGCTGTGACCGC +
Preference number: 4 (lower is better)
Translates to: DAGNKSKRNIPKRGVQQKCRLKP*NGGCDR
Trigger: GCGGTCACAGCCCCCATTCCAGGGTTTGAGCCTGCA...CTTCTGTTGAACACCCCTCTTAGGGATGTTTCTTTTGCTCTTATTTCCTGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp AGAACTGACTTGTGTCCAGTTTCGGATTTTACACCAAGCAGTCAGTTTCCTATAGCCGTGAAGCAAGCCTaGCACCAGAGGGTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: RTDLCPVSDFTPSSQFPIAVKQA*HQRVSR
Trigger: CCTCGAGACCCTCTGGTGCCAGGCTTGCTTCACGGC...TATAGGAAACTGACTGCTTGGTGTAAAATCCGAAACTGGACACAAGTCAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGAAGGTTGAGAAACCCTaGTCTCAGGTAACTTGGGCC +
Preference number: 4 (lower is better)
Translates to: GGESCSICPPAEILSFVQKVEKP*SQVTWA
Trigger: GGCCCAAGTTACCTGAGACCAGGGTTTCTCAACCTT...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGAGTGTGCTATGGATGTTaGGAGGCCCCCAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: NSIACKAETRRSPEEICRVCYGC*EAPSGR
Trigger: TCTGCCACTGGGGGCCTCCCAACATCCATAGCACAC...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTGGGGGCGTCACTGCATaGCCTGTGCCTGGACGCGGC +
Preference number: 4 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFGGVTA*PVPGRG
Trigger: GCCGCGTCCAGGCACAGGCCATGCAGTGACGCCCCC...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527636.7
CDS-3UTR TCA 90 bp AGATTAGATGTTGTGATGCCAATCTCACCCAAAGGTCTAATCTGGGAGAGACAACCTGGCTGCCCTGTTTaGATCATTCCCGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: RLDVVMPISPKGLIWERQPGCPV*IIPGQN
Trigger: GTTCTGGCCGGGAATGATTCAAACAGGGCAGCCAGG...TTGTCTCTCCCAGATTAGACCTTTGGGTGAGATTGGCATCACAACATCTAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp AGATTAGATGTTGTGATGCCAATCTCACCCAAAGGTCTAATCTGGGAGAGACAAAGGCTTGACGTCTTGTaGGGATCCTGGCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: RLDVVMPISPKGLIWERQRLDVL*GSWLPC
Trigger: ACAGGGCAGCCAGGATCCTCACAAGACGTCAAGCCT...TTGTCTCTCCCAGATTAGACCTTTGGGTGAGATTGGCATCACAACATCTAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCAAGGCTTGACGTCTTGTaGGGATCCTGGCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGARLDVL*GSWLPC
Trigger: ACAGGGCAGCCAGGATCCTCACAAGACGTCAAGCCT...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATCTGCTCGAGAAAAGCTaGAAATTCCACCAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDLLEKS*KFHQAK
Trigger: CTTCGCCTGGTGGAATTTTCAGCTTTTCTCGAGCAG...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCAGGTCAAAGCAGGTGTTaGGACAGGGAAGGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGAGQSRC*DREGGV
Trigger: CACACCCCCTTCCCTGTCTCAACACCTGCTTTGACC...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp GAGAAGCCCACTGGGATGACTGGACCAGTGGTTAAGACAGGGAAAATATCTGTCACAGTAGTCTGTTTATaGAGGGCAGAGGAGCACTGT +
Preference number: 4 (lower is better)
Translates to: EKPTGMTGPVVKTGKISVTVVCL*RAEEHC
Trigger: ACAGTGCTCCTCTGCCCTTCATAAACAGACTACTGT...GACAGATATTTTCCCTGTCTTAACCACTGGTCCAGTCATCCCAGTGGGCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGCCTGTCCACACATTCTaGGGGATTAAGCTTAGAGCA +
Preference number: 4 (lower is better)
Translates to: GGESCSICPPAEILSFVQPVHTF*GIKLRA
Trigger: TGCTCTAAGCTTAATCCCTCAGAATGTGTGGACAGG...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCAGGAAGCAGCATCCGGTaGGGCTGTGCTCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: LCKPDKCALSFEWKRKSPGSSIR*GCALAQ
Trigger: CTGTGCCAGAGCACAGCCTCACCGGATGCTGCTTCC...TGGAGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGAAAGAGTTGCCCCTTTaGGGGCTGGAACATTCTTTG +
Preference number: 4 (lower is better)
Translates to: GGESCSICPPAEILSFVQKELPL*GLEHSL
Trigger: CAAAGAATGTTCCAGCCCTCAAAGGGGCAACTCTTT...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGGGAGCTGGGGCCGATaGAGGCTCAAACCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLEGSWGR*RLKPWN
Trigger: ATTCCAGGGTTTGAGCCTGCATCGGCCCCAGCTCCC...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATGGGAGCTGGGGCCGATaGAGGCTCAAACCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDGSWGR*RLKPWN
Trigger: ATTCCAGGGTTTGAGCCTGCATCGGCCCCAGCTCCC...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCAGGCGAAGCTTGGTTGTaGCAATGGAGCGACCTTGCC +
Preference number: 4 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGAGEAWL*QWSDLA
Trigger: GGCAAGGTCGCTCCATTGGCACAACCAAGCTTCGCC...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATTCAGGCTTAGTGTTTTaGTGTTTCCCACGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDSGLVF*CFPRAS
Trigger: GCTGGCTCGTGGGAAACAGCAAAACACTAAGCCTGA...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp TTAGTGTTTTGCTGTTTCCCACGAGCCAGCCACATCCTCATGTTAGGGACCACAAAGGCTTTTCAGAAATaGCATGTGCAGGGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: LVFCCFPRASHILMLGTTKAFQK*HVQGFA
Trigger: GGCAAAGCCCTGCACATGGCATTTCTGAAAAGCCTT...TGTGGTCCCTAACATGAGGATGTGGCTGGCTCGTGGGAAACAGCAAAACACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGAGATTCTGTCATTTGTaGAGAAGTCCCCTCATCCGG +
Preference number: 4 (lower is better)
Translates to: GGESCSICPPAEILSFVQRFCHL*RSPLIR
Trigger: CCGGATGAGGGGACTTCTGCACAAATGACAGAATCT...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATTGCCGCTCCAGCTGCTaGGCTCAATTTTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDCRSSC*AQFWRW
Trigger: CCACCGCCAAAATTGAGCCCAGCAGCTGGAGCGGCA...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTTCTGGGCTGAGGACATaGCCGCCATGTGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSSGLRT*PPCAAG
Trigger: CCCTGCAGCACATGGCGGCCATGTCCTCAGCCCAGA...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTTGTTATGAATGGCAGTaGCCGAGACGATCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILCYEWQ*PRRSGL
Trigger: CAGCCCAGATCGTCTCGGCCACTGCCATTCATAACA...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGGGGGGCTGTGACCGCTaGCTGGATGGGGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKGGCDR*LDGVGL
Trigger: CAGGCCTACCCCATCCAGCCAGCGGTCACAGCCCCC...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp AGATTAGATGTTGTGATGCCAATCTCACCCAAAGGTCTAATCTGGGAGAGACAACCACCAGGCGAAGCTTaGTTGTGCCAATGGAGCGAC +
Preference number: 4 (lower is better)
Translates to: RLDVVMPISPKGLIWERQPPGEA*LCQWSD
Trigger: GTCGCTCCATTGGCACAACCAAGCTTCGCCTGGTGG...TTGTCTCTCCCAGATTAGACCTTTGGGTGAGATTGGCATCACAACATCTAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGACTGGTCATAAACTCCTaGTCCTGGGAGAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: NSIACKAETRRSPEEICRLVINS*SWERMG
Trigger: CCCCATCCTCTCCCAGGACCAGGAGTTTATGACCAG...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp ACAAACACAACAGTTTCTGGGGTCCTTCCGCTGAAGTGTGCTATGGATGTTGGGCCCAAAGGTCTAATCTaGGAGAGACAAAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: TNTTVSGVLPLKCAMDVGPKGLI*ERQREA
Trigger: GGCTTCTCTTTGTCTCTCCCAGATTAGACCTTTGGG...CCCAACATCCATAGCACACTTCAGCGGAAGGACCCCAGAAACTGTTGTGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATAGCAAGACGGGGCTCTaGGAAGGCTTCTTTAGTATG +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDSKTGL*EGFFSM
Trigger: CATACTAAAGAAGCCTTCCCAGAGCCCCGTCTTGCT...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CAA 72 bp GGACAGTTTTGCACTTTCTCCTCTGGTCTTCCCAATTaGGGAGAGGTCAGGCTTAGTGTTTTGCTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: GQFCTFSSGLPN*GEVRLSVLLFP
Trigger: GGGAAACAGCAAAACACTAAGCCTGACCTCTCCCAAATTGGGAAGACCAGAGGAGAAAGTGCAAAACTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GAGAAGCCCACTGGGATGACTGGACCAGTGGTTAAGACAGGGAAAATATCTGTCCTTCGTCTGATAAGATaGTTTTCCTCCTCCCACATG +
Preference number: 4 (lower is better)
Translates to: EKPTGMTGPVVKTGKISVLRLIR*FSSSHM
Trigger: CATGTGGGAGGAGGAAAATCATCTTATCAGACGAAG...GACAGATATTTTCCCTGTCTTAACCACTGGTCCAGTCATCCCAGTGGGCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527636.7
CDS-3UTR TCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCACCCTCCTGGCTGCACTaGAAAGTACCATTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGAPSWLH*KVPFLG
Trigger: ACCCAGGAATGGTACTTTTCAGTGCAGCCAGGAGGG...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCGGCTGGGTGACGAGGTaGAATGACACACTAGGTCAT +
Preference number: 4 (lower is better)
Translates to: ALPVLSPVKHLREITQNIGWVTR*NDTLGH
Trigger: ATGACCTAGTGTGTCATTTCACCTCGTCACCCAGCC...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCAGGACGCAGGGCTGGGTaGCGAGGTGAAATGACACAC +
Preference number: 4 (lower is better)
Translates to: LCKPDKCALSFEWKRKSPGRRAG*RGEMTH
Trigger: GTGTGTCATTTCACCTCGTCACCCAGCCCTGCGTCC...TGGAGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TTAGTGTTTTGCTGTTTCCCACGAGCCAGCCACATCCTCATGTTAGGGACCACAGTGCGCACTGTCATTTaGATGGAAAAGAAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: LVFCCFPRASHILMLGTTVRTVI*MEKKVS
Trigger: GGAGACTTTCTTTTCCATTCAAATGACAGTGCGCAC...TGTGGTCCCTAACATGAGGATGTGGCTGGCTCGTGGGAAACAGCAAAACACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATAAAGAGTTGCCCCTTTaGGGGCTGGAACATTCTTTG +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDKELPL*GLEHSL
Trigger: CAAAGAATGTTCCAGCCCTCAAAGGGGCAACTCTTT...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATGAACCACTGACCAGATaGAACGCTTACATCACAAGC +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDEPLTR*NAYITS
Trigger: GCTTGTGATGTAAGCGTTTCATCTGGTCAGTGGTTC...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGTTAAGAAAACATGTGTaGGAATTTGCCCACGCCCAC +
Preference number: 4 (lower is better)
Translates to: GGESCSICPPAEILSFVQLRKHV*EFAHAH
Trigger: GTGGGCGTGGGCAAATTCTCACACATGTTTTCTTAA...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTCCAATGGAGCGACCTTaGCAGGCAGGGACTGAGGGA +
Preference number: 4 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSPMERP*QAGTEG
Trigger: TCCCTCAGTCCCTGCCTGGCAAGGTCGCTCCATTGG...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATGGCGAAGCTTGGTTGTaGCAATGGAGCGACCTTGCC +
Preference number: 4 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDGEAWL*QWSDLA
Trigger: GGCAAGGTCGCTCCATTGGCACAACCAAGCTTCGCC...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCGAGTCTGGGTCTCGCTaGTGCTCGAGAAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: ALPVLSPVKHLREITQNIESGSR*CSRKAE
Trigger: TTCAGCTTTTCTCGAGCAGCAGCGAGACCCAGACTC...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp TTAGTGTTTTGCTGTTTCCCACGAGCCAGCCACATCCTCATGTTAGGGACCACACGAGGAATTGTGGGCTaGACATCTGAAGAACATAGA +
Preference number: 4 (lower is better)
Translates to: LVFCCFPRASHILMLGTTRGIVG*TSEEHR
Trigger: TCTATGTTCTTCAGATGTGCAGCCCACAATTCCTCG...TGTGGTCCCTAACATGAGGATGTGGCTGGCTCGTGGGAAACAGCAAAACACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTTCAGGCTTAGTGTTTTaGTGTTTCCCACGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILSGLVF*CFPRAS
Trigger: GCTGGCTCGTGGGAAACAGCAAAACACTAAGCCTGA...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTTTTGGCTGGTCTGAGTaGAGGACTTTGCTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILFGWSE*RTLLLG
Trigger: TCCTAGCAGCAAAGTCCTGCACTCAGACCAGCCAAA...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAATGCCGCTCCAGCTGCTaGGCTCAATTTTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKCRSSC*AQFWRW
Trigger: CCACCGCCAAAATTGAGCCCAGCAGCTGGAGCGGCA...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527636.7
CDS-3UTR CCA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGGTGGCCGAGACGATCTaGGCTGAGGACATGGCCGCC +
Preference number: 4 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKVAETI*AEDMAA
Trigger: GGCGGCCATGTCCTCAGCCCAGATCGTCTCGGCCAC...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTGTGGCCGAGACGATCTaGGCTGAGGACATGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFVAETI*AEDMAA
Trigger: GGCGGCCATGTCCTCAGCCCAGATCGTCTCGGCCAC...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATCAAACCAACTCTGCCTaGGCAATGCTCTGGAATACT +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDQTNSA*AMLWNT
Trigger: AGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTG...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTGGAGCACTGTCCAACTaGTTTCTAGAAGGAATGGGC +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILGALSN*FLEGMG
Trigger: GCCCATTCCTTCTAGAAACCAGTTGGACAGTGCTCC...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTCCTCAGGAAGTAAAATaGCTCGCCAGCTTTCCTACC +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILPQEVK*LASFPT
Trigger: GGTAGGAAAGCTGGCGAGCCATTTTACTTCCTGAGG...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GATGCAGGAAATAAGAGCAAAAGAAACATCCCTAAGAGGGGTGTTCAACAGAAGCTCAGAGCCTGTGGCTaGGGAATTGTCCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: DAGNKSKRNIPKRGVQQKLRACG*GIVLRK
Trigger: CTTCCTGAGGACAATTCCCCAGCCACAGGCTCTGAG...CTTCTGTTGAACACCCCTCTTAGGGATGTTTCTTTTGCTCTTATTTCCTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGACCTGGCTGCCCTGTTTaGATCATTCCCGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: LCAHVPTTYKNIFLWEAGPGCPV*IIPGQN
Trigger: GTTCTGGCCGGGAATGATTCAAACAGGGCAGCCAGG...TCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAAAGGCTTGACGTCTTGTaGGGATCCTGGCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKRLDVL*GSWLPC
Trigger: ACAGGGCAGCCAGGATCCTCACAAGACGTCAAGCCT...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATGTATCCACAGGCTGGTaGGGATGCTTACAATTTTCT +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDVSTGW*GCLQFS
Trigger: AGAAAATTGTAAGCATCCTCACCAGCCTGTGGATAC...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCAAGAAGCCCACTGGGATaGCTGGACCAGTGGTTAAGA +
Preference number: 4 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGARSPLG*LDQWLR
Trigger: TCTTAACCACTGGTCCAGTCATCCCAGTGGGCTTCT...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATGACTGCCATACAGAATaGAGGACAAAAGACAGACTC +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDDCHTE*RTKDRL
Trigger: GAGTCTGTCTTTTGTCCTTCATTCTGTATGGCAGTC...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCCAATGGTGTCAAGGTTaGGAAACCCTGGTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: ALPVLSPVKHLREITQNIQWCQG*ETLVSG
Trigger: ACCTGAGACCAGGGTTTCTCAACCTTGACACCATTG...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTTCGTTCGGGGACTTTTaGCACCAAGTACTTGGAATG +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILSFGDF*HQVLGM
Trigger: CATTCCAAGTACTTGGTGTCAAAAGTCCCCGAACGA...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GAGAAGCCCACTGGGATGACTGGACCAGTGGTTAAGACAGGGAAAATATCTGTCACTGTCGTCTCAGTTTaGGGCTTCCAACTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: EKPTGMTGPVVKTGKISVTVVSV*GFQLSK
Trigger: TTTTGAAAGTTGGAAGCCTCAAACTGAGACGACAGT...GACAGATATTTTCCCTGTCTTAACCACTGGTCCAGTCATCCCAGTGGGCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GAGAAGCCCACTGGGATGACTGGACCAGTGGTTAAGACAGGGAAAATATCTGTCTATCAAAGGAACCACTaGCCAGATGAAACGCTTACA +
Preference number: 4 (lower is better)
Translates to: EKPTGMTGPVVKTGKISVYQRNH*PDETLT
Trigger: TGTAAGCGTTTCATCTGGTCAGTGGTTCCTTTGATA...GACAGATATTTTCCCTGTCTTAACCACTGGTCCAGTCATCCCAGTGGGCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp AAGTTGCAACCTTTTGTTTTGGTATATACATTTGAGTGTGGTGAAAGAACTGACCACTTGAATGTGCAATaGAGCGGCGGCGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: KLQPFVLVYTFECGERTDHLNVQ*SGGGSG
Trigger: GCCGCTGCCGCCGCCGCTTCATTGCACATTCAAGTG...GTCAGTTCTTTCACCACACTCAAATGTATATACCAAAACAAAAGGTTGCAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527636.7
CDS-3UTR GCA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATCACTGCCGCTCCAGCTaGTGGGCTCAATTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYHCRSS*WAQFWR
Trigger: CCGCCAAAATTGAGCCCAGCAGCTGGAGCGGCAGTG...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATCCAATGGAGCGACCTTaGCAGGCAGGGACTGAGGGA +
Preference number: 4 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYPMERP*QAGTEG
Trigger: TCCCTCAGTCCCTGCCTGGCAAGGTCGCTCCATTGG...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGGGCGAAGCTTGGTTGTaGCAATGGAGCGACCTTGCC +
Preference number: 4 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTGEAWL*QWSDLA
Trigger: GGCAAGGTCGCTCCATTGGCACAACCAAGCTTCGCC...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp GATGCAGGAAATAAGAGCAAAAGAAACATCCCTAAGAGGGGTGTTCAACAGAAGGAGTCTGGGTCTCGCTaGTGCTCGAGAAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: DAGNKSKRNIPKRGVQQKESGSR*CSRKAE
Trigger: TTCAGCTTTTCTCGAGCAGCAGCGAGACCCAGACTC...CTTCTGTTGAACACCCCTCTTAGGGATGTTTCTTTTGCTCTTATTTCCTGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATCGAGGAATTGTGGGCTaGACATCTGAAGAACATAGA +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDRGIVG*TSEEHR
Trigger: TCTATGTTCTTCAGATGTGCAGCCCACAATTCCTCG...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTACATCAAACCAACTCTaGCTGGGCAATGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILTSNQL*LGNALE
Trigger: TTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGT...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCCTGGCCTCCAAACTCTaGAGTGACAACACAAGATGG +
Preference number: 4 (lower is better)
Translates to: ALPVLSPVKHLREITQNILASKL*SDNTRW
Trigger: CCATCTTGTGTTGTCACTGCAGAGTTTGGAGGCCAG...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGATATGAGGGAAATGAATaGCCAGAGACCAGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: NSIACKAETRRSPEEICRYEGNE*PETRAP
Trigger: TGGGGCTCTGGTCTCTGGGCATTCATTTCCCTCATA...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCGCCAGCTTTCCTACCTaGTTGTGGATGCCTCAGATA +
Preference number: 4 (lower is better)
Translates to: ALPVLSPVKHLREITQNIASFPT*LWMPQI
Trigger: TATCTGAGGCATCCACAAGCAGGTAGGAAAGCTGGC...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGCCTTCCGCTGAAGTGTaGTATGGATGTTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLEPSAEV*YGCWEA
Trigger: GGCCTCCCAACATCCATAGCACACTTCAGCGGAAGG...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCTGCTGGGCTCAATTTTaGCGGTGGGATTTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: ALPVLSPVKHLREITQNICWAQF*RWDFPS
Trigger: GCTTGGAAAATCCCACCGCCAAAATTGAGCCCAGCA...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATCACGAGATTTCCTTCTaGCAAGAACCTGAATGTGAC +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDHEISF*QEPECD
Trigger: GTCACATTCAGGTTCTTGCCAGAAGGAAATCTCGTG...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp AAGTTGCAACCTTTTGTTTTGGTATATACATTTGAGTGTGGTGAAAGAACTGACTCTGGGCTGAGGACATaGCCGCCATGTGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: KLQPFVLVYTFECGERTDSGLRT*PPCAAG
Trigger: CCCTGCAGCACATGGCGGCCATGTCCTCAGCCCAGA...GTCAGTTCTTTCACCACACTCAAATGTATATACCAAAACAAAAGGTTGCAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGTCTGGGCTGAGGACATaGCCGCCATGTGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKSGLRT*PPCAAG
Trigger: CCCTGCAGCACATGGCGGCCATGTCCTCAGCCCAGA...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATTGCAGGCTCAAACCCTaGAATGGGGGCTGTGACCGC +
Preference number: 4 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYCRLKP*NGGCDR
Trigger: GCGGTCACAGCCCCCATTCCAGGGTTTGAGCCTGCA...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp TTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGCTTGGTTGTGCCAATaGAGCGACCTTGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LCAHVPTTYKNIFLWEAGAWLCQ*SDLARQ
Trigger: CTGCCTGGCAAGGTCGCTCCATTGGCACAACCAAGC...TCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGAACTCTCGTACTGACTaGTTACACCATAAAAAGCCC +
Preference number: 4 (lower is better)
Translates to: GGESCSICPPAEILSFVQNSRTD*LHHKKP
Trigger: GGGCTTTTTATGGTGTAACCAGTCAGTACGAGAGTT...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCGGAGCACTGTCCAACTaGTTTCTAGAAGGAATGGGC +
Preference number: 4 (lower is better)
Translates to: ALPVLSPVKHLREITQNIGALSN*FLEGMG
Trigger: GCCCATTCCTTCTAGAAACCAGTTGGACAGTGCTCC...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGTCTAGCTGTTCTTCTTaGGTCCCAGTATTTTTGTGC +
Preference number: 4 (lower is better)
Translates to: GGESCSICPPAEILSFVQSSCSS*VPVFLC
Trigger: GCACAAAAATACTGGGACCCAAGAAGAACAGCTAGA...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GATGCAGGAAATAAGAGCAAAAGAAACATCCCTAAGAGGGGTGTTCAACAGAAGCAAAGAGAAGCCCACTaGGATGACTGGACCAGTGGT +
Preference number: 4 (lower is better)
Translates to: DAGNKSKRNIPKRGVQQKQREAH*DDWTSG
Trigger: ACCACTGGTCCAGTCATCCCAGTGGGCTTCTCTTTG...CTTCTGTTGAACACCCCTCTTAGGGATGTTTCTTTTGCTCTTATTTCCTGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTTCCCTGTTTAGGCTGTaGAAAACTGGCCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILSLFRL*KTGLQT
Trigger: AGTTTGGAGGCCAGTTTTCCACAGCCTAAACAGGGA...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAAACACAACAGTTTCTaGGGTCCTTCCGCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILKHNSF*GPSAEV
Trigger: CACTTCAGCGGAAGGACCCCAGAAACTGTTGTGTTT...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATATTTCTTCCACACTGTaGTATAGTGCTGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDISSTL*YSAGRE
Trigger: TTCCCTGCCAGCACTATACCACAGTGTGGAAGAAAT...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CAA 72 bp TGCACATGTTCCTACCACTTACAAAAACATATTTCTTaGGGAAGCTGGAGGAGCACTCCCTGTTCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: CTCSYHLQKHIS*GSWRSTPCSLP
Trigger: GGGGAGAGAACAGGGAGTGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTCTTCGTCTGATAAGATaGTTTTCCTCCTCCCACATG +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILLRLIR*FSSSHM
Trigger: CATGTGGGAGGAGGAAAATCATCTTATCAGACGAAG...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp GAGAAGCCCACTGGGATGACTGGACCAGTGGTTAAGACAGGGAAAATATCTGTCGCCCCAGCATCATCTTaGATATTGCAGTTTAAATCA +
Preference number: 4 (lower is better)
Translates to: EKPTGMTGPVVKTGKISVAPASS*ILQFKS
Trigger: TGATTTAAACTGCAATATTCAAGATGATGCTGGGGC...GACAGATATTTTCCCTGTCTTAACCACTGGTCCAGTCATCCCAGTGGGCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATTCCGTGTTCACTATTTaGAACTTCAAACACACAGGC +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDSVFTI*NFKHTG
Trigger: GCCTGTGTGTTTGAAGTTTCAAATAGTGAACACGGA...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp TCATTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTGGTCAAAGCAGGTGTTaGGACAGGGAAGGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: SLCKPDKCALSFEWKRKSGQSRC*DREGGV
Trigger: CACACCCCCTTCCCTGTCTCAACACCTGCTTTGACC...AGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATACTGCAAAGGCATTCTaGGCAAGAGGATGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDTAKAF*ARGCRW
Trigger: CCACCTGCATCCTCTTGCTCAGAATGCCTTTGCAGT...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCACCCGATGGGATATTTaGCAATATCTGGAGACACGC +
Preference number: 4 (lower is better)
Translates to: ALPVLSPVKHLREITQNITRWDI*QYLETR
Trigger: GCGTGTCTCCAGATATTGTCAAATATCCCATCGGGT...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGCACAGGGGGATCCTaGATCTCCCCATCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: LCAHVPTTYKNIFLWEAGGTGGS*ISPSLL
Trigger: TAGAAGAGATGGGGAGATTCAGGATCCCCCTGTGCC...TCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGACACTTTGGCAGCTCTaGATTGAAAACTTCCTACAA +
Preference number: 4 (lower is better)
Translates to: GGESCSICPPAEILSFVQTLWQL*IENFLQ
Trigger: TTGTAGGAAGTTTTCAATTCAGAGCTGCCAAAGTGT...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCAAGTCTCCACAGAGACTaGACACGAACACAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGASLHRD*TRTQGG
Trigger: TCCTCCTTGTGTTCGTGTTCAGTCTCTGTGGAGACT...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCACTGGCAGGGAAGAGTTaGGAATTCCAGCTGCTAACT +
Preference number: 4 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGALAGKS*EFQLLT
Trigger: AGTTAGCAGCTGGAATTCTCAACTCTTCCCTGCCAG...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCGACAGAGGTGGAATCTaGTGGAATCTGACCCCATTT +
Preference number: 4 (lower is better)
Translates to: ALPVLSPVKHLREITQNIDRGGI*WNLTPF
Trigger: AAATGGGGTCAGATTCCATCAGATTCCACCTCTGTC...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GATGCAGGAAATAAGAGCAAAAGAAACATCCCTAAGAGGGGTGTTCAACAGAAGAGACAAGAGTCCACCTaGCAGAGGTGGAATCTGATG +
Preference number: 4 (lower is better)
Translates to: DAGNKSKRNIPKRGVQQKRQEST*QRWNLM
Trigger: CATCAGATTCCACCTCTGTCAGGTGGACTCTTGTCT...CTTCTGTTGAACACCCCTCTTAGGGATGTTTCTTTTGCTCTTATTTCCTGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp AAGTTGCAACCTTTTGTTTTGGTATATACATTTGAGTGTGGTGAAAGAACTGACCACTGCCGCTCCAGCTaGTGGGCTCAATTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: KLQPFVLVYTFECGERTDHCRSS*WAQFWR
Trigger: CCGCCAAAATTGAGCCCAGCAGCTGGAGCGGCAGTG...GTCAGTTCTTTCACCACACTCAAATGTATATACCAAAACAAAAGGTTGCAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527636.7
CDS-3UTR GCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCGCTCCAGACCCCTTCTaGATCATTGTCAATTGGCTT +
Preference number: 4 (lower is better)
Translates to: ALPVLSPVKHLREITQNIAPDPF*IIVNWL
Trigger: AAGCCAATTGACAATGATGCAGAAGGGGTCTGGAGC...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp TTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAATGGCCGCCATGTGCTaGAGGGCCTTATCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: LCAHVPTTYKNIFLWEAGMAAMC*RALSFA
Trigger: TGCAAAGGATAAGGCCCTGCAGCACATGGCGGCCAT...TCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp AAGTTGCAACCTTTTGTTTTGGTATATACATTTGAGTGTGGTGAAAGAACTGACCCAATGGAGCGACCTTaGCAGGCAGGGACTGAGGGA +
Preference number: 4 (lower is better)
Translates to: KLQPFVLVYTFECGERTDPMERP*QAGTEG
Trigger: TCCCTCAGTCCCTGCCTGGCAAGGTCGCTCCATTGG...GTCAGTTCTTTCACCACACTCAAATGTATATACCAAAACAAAAGGTTGCAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATGAGTCTGGGTCTCGCTaGTGCTCGAGAAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDESGSR*CSRKAE
Trigger: TTCAGCTTTTCTCGAGCAGCAGCGAGACCCAGACTC...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTCGAGGAATTGTGGGCTaGACATCTGAAGAACATAGA +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILRGIVG*TSEEHR
Trigger: TCTATGTTCTTCAGATGTGCAGCCCACAATTCCTCG...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATCTTTGCATCTCACAGTaGAGTATTCCGTATTCATGC +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDLCISQ*SIPYSC
Trigger: GCATGAATACGGAATACTGCACTGTGAGATGCAAAG...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTGCTTTTAGCCATTTGTaGTCGCCTGGTCATAAACTC +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILAFSHL*SPGHKL
Trigger: GAGTTTATGACCAGGCGAGCACAAATGGCTAAAAGC...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGGACACAATGTCACCTaGCTCTTGCAAGGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLEGHNVT*LLQGSR
Trigger: CCTAGAGCCTTGCAAGAGGCAGGTGACATTGTGTCC...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCCCATGTGCAGGGCTTTaGCACAGAAACACCAACATA +
Preference number: 4 (lower is better)
Translates to: ALPVLSPVKHLREITQNIPCAGL*HRNTNI
Trigger: TATGTTGGTGTTTCTGTGGCAAAGCCCTGCACATGG...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGAAAGGCTTTTCAGAAATaGCATGTGCAGGGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: NSIACKAETRRSPEEICRKAFQK*HVQGFA
Trigger: GGCAAAGCCCTGCACATGGCATTTCTGAAAAGCCTT...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCGGCAGCCTTTTGCACTaGATACCCTACATGCAACAT +
Preference number: 4 (lower is better)
Translates to: ALPVLSPVKHLREITQNIGSLLH*IPYMQH
Trigger: ATGTTGCATGTAGGGTATGCAGTGCAAAAGGCTGCC...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAACCTTCCGCTGAAGTGTaGTATGGATGTTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKPSAEV*YGCWEA
Trigger: GGCCTCCCAACATCCATAGCACACTTCAGCGGAAGG...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGAAGGACTTTAAAGAGTTaGCCCTTTGAGGGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: NSIACKAETRRSPEEICRRTLKS*PFEGWN
Trigger: GTTCCAGCCCTCAAAGGGGCAACTCTTTAAAGTCCT...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATTTCCAAGCCGAAGCCTaGAGCCTTTTCAAGAAAATA +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDFQAEA*SLFKKI
Trigger: TATTTTCTTGAAAAGGCTCCAGGCTTCGGCTTGGAA...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGTGCCGCTCCAGCTGCTaGGCTCAATTTTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKCRSSC*AQFWRW
Trigger: CCACCGCCAAAATTGAGCCCAGCAGCTGGAGCGGCA...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTCACGAGATTTCCTTCTaGCAAGAACCTGAATGTGAC +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILHEISF*QEPECD
Trigger: GTCACATTCAGGTTCTTGCCAGAAGGAAATCTCGTG...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATTGTTATGAATGGCAGTaGCCGAGACGATCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDCYEWQ*PRRSGL
Trigger: CAGCCCAGATCGTCTCGGCCACTGCCATTCATAACA...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATTTTGTTGTACGAGTCTaGGTCTCGCTGCTGCTCGAG +
Preference number: 4 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDFVVRV*VSLLLE
Trigger: CTCGAGCAGCAGCGAGACCCAGACTCGTACAACAAA...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GATGCAGGAAATAAGAGCAAAAGAAACATCCCTAAGAGGGGTGTTCAACAGAAGCTGGTCTTCCCAATTTaGGAGAGGTCAGGCTTAGTG +
Preference number: 4 (lower is better)
Translates to: DAGNKSKRNIPKRGVQQKLVFPI*ERSGLV
Trigger: CACTAAGCCTGACCTCTCCCAAATTGGGAAGACCAG...CTTCTGTTGAACACCCCTCTTAGGGATGTTTCTTTTGCTCTTATTTCCTGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTCTGGTCATAAACTCCTaGTCCTGGGAGAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSLVINS*SWERMG
Trigger: CCCCATCCTCTCCCAGGACCAGGAGTTTATGACCAG...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCAAGCAAGACGGGGCTCTaGGAAGGCTTCTTTAGTATG +
Preference number: 4 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGASKTGL*EGFFSM
Trigger: CATACTAAAGAAGCCTTCCCAGAGCCCCGTCTTGCT...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTTGGAGACACGCTGGGTaGGGAATAGGTGCTAGTGGT +
Preference number: 4 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSWRHAG*GIGASG
Trigger: ACCACTAGCACCTATTCCCCACCCAGCGTGTCTCCA...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTCTGTCACTAACCAGCTaGGTGACTCTAAACATGTCA +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILLSLTS*VTLNMS
Trigger: TGACATGTTTAGAGTCACCCAGCTGGTTAGTGACAG...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGCAGGACACTTCAGTGTaGGAAGCAGCATCCGGTGAG +
Preference number: 4 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTQDTSV*EAASGE
Trigger: CTCACCGGATGCTGCTTCCCACACTGAAGTGTCCTG...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGCTCAGAGCCTGTGGCTaGGGAATTGTCCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTLRACG*GIVLRK
Trigger: CTTCCTGAGGACAATTCCCCAGCCACAGGCTCTGAG...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATGTGAACAGAGGCCTGTaGTTGGTTACTCATCCCGGT +
Preference number: 4 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDVNRGL*LVTHPG
Trigger: ACCGGGATGAGTAACCAACCACAGGCCTCTGTTCAC...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp TTAGTGTTTTGCTGTTTCCCACGAGCCAGCCACATCCTCATGTTAGGGACCACAGTGAACAAACACACGTaGCGAAAACCGATTTACATA +
Preference number: 4 (lower is better)
Translates to: LVFCCFPRASHILMLGTTVNKHT*RKPIYI
Trigger: TATGTAAATCGGTTTTCGCCACGTGTGTTTGTTCAC...TGTGGTCCCTAACATGAGGATGTGGCTGGCTCGTGGGAAACAGCAAAACACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTAGGCTTGACGTCTTGTaGGGATCCTGGCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFRLDVL*GSWLPC
Trigger: ACAGGGCAGCCAGGATCCTCACAAGACGTCAAGCCT...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTCACCACCCTGTGTGGTaGGGTTTACAGTCAGTCGTT +
Preference number: 4 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSHHPVW*GLQSVV
Trigger: AACGACTGACTGTAAACCTCACCACACAGGGTGGTG...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp TTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGACACCACCCTGTGTGGTaGGGTTTACAGTCAGTCGTT +
Preference number: 4 (lower is better)
Translates to: LCAHVPTTYKNIFLWEAGHHPVW*GLQSVV
Trigger: AACGACTGACTGTAAACCTCACCACACAGGGTGGTG...TCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp AAGTTGCAACCTTTTGTTTTGGTATATACATTTGAGTGTGGTGAAAGAACTGACGGTCAAAGCAGGTGTTaGGACAGGGAAGGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: KLQPFVLVYTFECGERTDGQSRC*DREGGV
Trigger: CACACCCCCTTCCCTGTCTCAACACCTGCTTTGACC...GTCAGTTCTTTCACCACACTCAAATGTATATACCAAAACAAAAGGTTGCAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp AGATTAGATGTTGTGATGCCAATCTCACCCAAAGGTCTAATCTGGGAGAGACAACTGACGAATGTCCACTaGTTCAAGCAATGGGTCACT +
Preference number: 4 (lower is better)
Translates to: RLDVVMPISPKGLIWERQLTNVH*FKQWVT
Trigger: AGTGACCCATTGCTTGAATCAGTGGACATTCGTCAG...TTGTCTCTCCCAGATTAGACCTTTGGGTGAGATTGGCATCACAACATCTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATTTCCTGGGTAGAATATaGACCAGACAGCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDFLGRI*TRQLSH
Trigger: GTGGGAGAGCTGTCTGGTTCATATTCTACCCAGGAA...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TCATTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCCTCCTGGCTGCACTaGAAAGTACCATTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SLCKPDKCALSFEWKRKSPSWLH*KVPFLG
Trigger: ACCCAGGAATGGTACTTTTCAGTGCAGCCAGGAGGG...AGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATACACTTTGGCAGCTCTaGATTGAAAACTTCCTACAA +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDTLWQL*IENFLQ
Trigger: TTGTAGGAAGTTTTCAATTCAGAGCTGCCAAAGTGT...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGGGCTGGGTGACGAGGTaGAATGACACACTAGGTCAT +
Preference number: 4 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTGWVTR*NDTLGH
Trigger: ATGACCTAGTGTGTCATTTCACCTCGTCACCCAGCC...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp AGAACTGACTTGTGTCCAGTTTCGGATTTTACACCAAGCAGTCAGTTTCCTATACTGGCAGGGAAGAGTTaGGAATTCCAGCTGCTAACT +
Preference number: 4 (lower is better)
Translates to: RTDLCPVSDFTPSSQFPILAGKS*EFQLLT
Trigger: AGTTAGCAGCTGGAATTCTCAACTCTTCCCTGCCAG...TATAGGAAACTGACTGCTTGGTGTAAAATCCGAAACTGGACACAAGTCAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCAGACAGAGGTGGAATCTaGTGGAATCTGACCCCATTT +
Preference number: 4 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGADRGGI*WNLTPF
Trigger: AAATGGGGTCAGATTCCATCAGATTCCACCTCTGTC...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCAGAACCACTGACCAGATaGAACGCTTACATCACAAGC +
Preference number: 4 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGAEPLTR*NAYITS
Trigger: GCTTGTGATGTAAGCGTTTCATCTGGTCAGTGGTTC...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCATCTGGGTCTCGCTGCTaGTCGAGAAAAGCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGASGSRC*SRKAEN
Trigger: ATTTTCAGCTTTTCTCGAGCAGCAGCGAGACCCAGA...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTCTTTGCATCTCACAGTaGAGTATTCCGTATTCATGC +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILLCISQ*SIPYSC
Trigger: GCATGAATACGGAATACTGCACTGTGAGATGCAAAG...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGTCATGTTCTATTGTGTaGACATGTTCCTACCACTTA +
Preference number: 4 (lower is better)
Translates to: GGESCSICPPAEILSFVQSCSIV*TCSYHL
Trigger: TAAGTGGTAGGAACATGTGCACACAATAGAACATGA...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGAGTAAATCTCCTACAGTaGAAAGGACAGCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: NSIACKAETRRSPEEICRVNLLQ*KGQLCR
Trigger: TCTGCAGAGCTGTCCTTTGCACTGTAGGAGATTTAC...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGAGTATTACTAAGGCACTaGTTACGGGAACACTTTGGC +
Preference number: 4 (lower is better)
Translates to: NSIACKAETRRSPEEICRVLLRH*LREHFG
Trigger: GCCAAAGTGTTCCCGTAAGCAGTGCCTTAGTAATAC...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp GATGCAGGAAATAAGAGCAAAAGAAACATCCCTAAGAGGGGTGTTCAACAGAAGAGGACTTTAAAGAGTTaGCCCTTTGAGGGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: DAGNKSKRNIPKRGVQQKRTLKS*PFEGWN
Trigger: GTTCCAGCCCTCAAAGGGGCAACTCTTTAAAGTCCT...CTTCTGTTGAACACCCCTCTTAGGGATGTTTCTTTTGCTCTTATTTCCTGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATGCTCAATTTTGGCGGTaGGATTTTCCAAGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDAQFWR*DFPSRS
Trigger: GCTTCGGCTTGGAAAATCCCACCGCCAAAATTGAGC...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATTGCTGGGCTCAATTTTaGCGGTGGGATTTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDCWAQF*RWDFPS
Trigger: GCTTGGAAAATCCCACCGCCAAAATTGAGCCCAGCA...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATTGCATCATTGTCAATTaGCTTATCTGCAGAGTCACT +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDCIIVN*LICRVT
Trigger: AGTGACTCTGCAGATAAGCCAATTGACAATGATGCA...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTTGTTATGAATGGCAGTaGCCGAGACGATCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSCYEWQ*PRRSGL
Trigger: CAGCCCAGATCGTCTCGGCCACTGCCATTCATAACA...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTCCACCAGGCGAAGCTTaGTTGTGCCAATGGAGCGAC +
Preference number: 4 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFPPGEA*LCQWSD
Trigger: GTCGCTCCATTGGCACAACCAAGCTTCGCCTGGTGG...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATCATATATTCACACATTaGGGAGCGGTTTATTCGGTA +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDHIFTH*GAVYSV
Trigger: TACCGAATAAACCGCTCCCCAATGTGTGAATATATG...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTGAGACGCTAAAGAAATaGATGTGCTTCAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILETLKK*MCFKRM
Trigger: CATCCTCTTGAAGCACATCCATTTCTTTAGCGTCTC...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp GATGCAGGAAATAAGAGCAAAAGAAACATCCCTAAGAGGGGTGTTCAACAGAAGCACTGTAAGAATGGTTaGCATGCCCAATGTGCACGA +
Preference number: 4 (lower is better)
Translates to: DAGNKSKRNIPKRGVQQKHCKNG*HAQCAR
Trigger: TCGTGCACATTGGGCATGCCAACCATTCTTACAGTG...CTTCTGTTGAACACCCCTCTTAGGGATGTTTCTTTTGCTCTTATTTCCTGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAACAAAGAGAAGCCCACTaGGATGACTGGACCAGTGGT +
Preference number: 4 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKQREAH*DDWTSG
Trigger: ACCACTGGTCCAGTCATCCCAGTGGGCTTCTCTTTG...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATTGGAGACACGCTGGGTaGGGAATAGGTGCTAGTGGT +
Preference number: 4 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYWRHAG*GIGASG
Trigger: ACCACTAGCACCTATTCCCCACCCAGCGTGTCTCCA...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTTTTTTGGCTGGTGTTTaGCCTTCTTGTCCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILFLAGV*PSCPFH
Trigger: GTGAAAAGGACAAGAAGGCCAAACACCAGCCAAAAA...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp AGATTAGATGTTGTGATGCCAATCTCACCCAAAGGTCTAATCTGGGAGAGACAACAGCACCTAGCAAACTaGGTGACACTAAACAAGTGT +
Preference number: 4 (lower is better)
Translates to: RLDVVMPISPKGLIWERQQHLAN*VTLNKC
Trigger: ACACTTGTTTAGTGTCACTCAGTTTGCTAGGTGCTG...TTGTCTCTCCCAGATTAGACCTTTGGGTGAGATTGGCATCACAACATCTAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCATTATCCTTTGCAGTCTaGTCCTTGAAGGTGACAGTG +
Preference number: 4 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGALSFAV*SLKVTV
Trigger: CACTGTCACCTTCAAGGATCAGACTGCAAAGGATAA...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526600.1
CDS-3UTR TCA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATCTCCAAACTCTGCAGTaGCAACACAAGATGGCCGTG +
Preference number: 4 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYLQTLQ*QHKMAV
Trigger: CACGGCCATCTTGTGTTGTCACTGCAGAGTTTGGAG...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGACAATGGTGTCAAGGTTaGGAAACCCTGGTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LCAHVPTTYKNIFLWEAGQWCQG*ETLVSG
Trigger: ACCTGAGACCAGGGTTTCTCAACCTTGACACCATTG...TCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATTTCCCCAGTGCTGAGTaGAAGAATACTTGTAGCGAG +
Preference number: 4 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDFPSAE*KNTCSE
Trigger: CTCGCTACAAGTATTCTTTCACTCAGCACTGGGGAA...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCAGGTGACGAGGTGAAATaGCACACTAGGTCATCAGCA +
Preference number: 4 (lower is better)
Translates to: LCKPDKCALSFEWKRKSPGDEVK*HTRSSA
Trigger: TGCTGATGACCTAGTGTGTCATTTCACCTCGTCACC...TGGAGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTAGTCTCCACAGAGACTaGACACGAACACAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSSLHRD*TRTQGG
Trigger: TCCTCCTTGTGTTCGTGTTCAGTCTCTGTGGAGACT...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCACTGTCGTCTCAGTTTaGGGCTTCCAACTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: ALPVLSPVKHLREITQNITVVSV*GFQLSK
Trigger: TTTTGAAAGTTGGAAGCCTCAAACTGAGACGACAGT...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGAGACAAGAGTCCACCTaGCAGAGGTGGAATCTGATG +
Preference number: 4 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTRQEST*QRWNLM
Trigger: CATCAGATTCCACCTCTGTCAGGTGGACTCTTGTCT...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCACCCATTTTATACACGTaGCACAAAGACACAGACCGT +
Preference number: 4 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGAPILYT*HKDTDR
Trigger: ACGGTCTGTGTCTTTGTGTCACGTGTATAAAATGGG...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGCTCCAGACCCCTTCTaGATCATTGTCAATTGGCTT +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLEAPDPF*IIVNWL
Trigger: AAGCCAATTGACAATGATGCAGAAGGGGTCTGGAGC...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGCAGGGCCTTATCCTTTaGAGTCTGATCCATGCTTGT +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLEQGLIL*SLIHAC
Trigger: ACAAGCATGGATCAGACTGCAAAGGATAAGGCCCTG...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334310.10
CDS-3UTR GCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGTCTGGGTCTCGCTGCTaGTCGAGAAAAGCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLESGSRC*SRKAEN
Trigger: ATTTTCAGCTTTTCTCGAGCAGCAGCGAGACCCAGA...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGAGATTCTGTATACTTTaGATCTCACAGTGCAGTATT +
Preference number: 4 (lower is better)
Translates to: GGESCSICPPAEILSFVQRFCIL*ISQCSI
Trigger: AATACTGCACTGTGAGATGCAAAGTATACAGAATCT...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp AGAACTGACTTGTGTCCAGTTTCGGATTTTACACCAAGCAGTCAGTTTCCTATAACATCAAACCAACTCTaGCTGGGCAATGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: RTDLCPVSDFTPSSQFPITSNQL*LGNALE
Trigger: TTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGT...TATAGGAAACTGACTGCTTGGTGTAAAATCCGAAACTGGACACAAGTCAGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATACATCAAACCAACTCTaGCTGGGCAATGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDTSNQL*LGNALE
Trigger: TTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGT...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp TTAGTGTTTTGCTGTTTCCCACGAGCCAGCCACATCCTCATGTTAGGGACCACACATCATCTTGAATATTaGAGTTTAAATCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LVFCCFPRASHILMLGTTHHLEY*SLNQPR
Trigger: TCTGGGCTGATTTAAACTGCAATATTCAAGATGATG...TGTGGTCCCTAACATGAGGATGTGGCTGGCTCGTGGGAAACAGCAAAACACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCAAATGGGGACAGTTTTaGACTTTCTCCTCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: ALPVLSPVKHLREITQNIKWGQF*TFSSGL
Trigger: AAGACCAGAGGAGAAAGTGCAAAACTGTCCCCATTT...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGACTTTGCTGCTAGGATaGTTACCAAATAGAAATTTG +
Preference number: 4 (lower is better)
Translates to: GGESCSICPPAEILSFVQTLLLG*LPNRNL
Trigger: CAAATTTCTATTTGGTAAGCATCCTAGCAGCAAAGT...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGCCATGTGCAGGGCTTTaGCACAGAAACACCAACATA +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLEPCAGL*HRNTNI
Trigger: TATGTTGGTGTTTCTGTGGCAAAGCCCTGCACATGG...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp TTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGATCTGAGGCAGCCTTTTaGACTGCATACCCTACATGC +
Preference number: 4 (lower is better)
Translates to: LCAHVPTTYKNIFLWEAGSEAAF*TAYPTC
Trigger: GCATGTAGGGTATGCAGTGCAAAAGGCTGCCTCAGA...TCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp TCATTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTACATGTGTGAGAATTTaGCCACGCCCACCCCCATCT +
Preference number: 4 (lower is better)
Translates to: SLCKPDKCALSFEWKRKSTCVRI*PRPPPS
Trigger: AGATGGGGGTGGGCGTGGGCAAATTCTCACACATGT...AGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGATTCCAAGCCGAAGCCTaGAGCCTTTTCAAGAAAATA +
Preference number: 4 (lower is better)
Translates to: NSIACKAETRRSPEEICRFQAEA*SLFKKI
Trigger: TATTTTCTTGAAAAGGCTCCAGGCTTCGGCTTGGAA...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527636.7
CDS-3UTR CCA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGGCTCAATTTTGGCGGTaGGATTTTCCAAGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTAQFWR*DFPSRS
Trigger: GCTTCGGCTTGGAAAATCCCACCGCCAAAATTGAGC...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTTGCATCATTGTCAATTaGCTTATCTGCAGAGTCACT +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILCIIVN*LICRVT
Trigger: AGTGACTCTGCAGATAAGCCAATTGACAATGATGCA...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTCCAGCTTGTTATGAATaGCAGTGGCCGAGACGATCT +
Preference number: 4 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSPACYE*QWPRRS
Trigger: AGATCGTCTCGGCCACTGCCATTCATAACAAGCTGG...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp TTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGACCAGCTTGTTATGAATaGCAGTGGCCGAGACGATCT +
Preference number: 4 (lower is better)
Translates to: LCAHVPTTYKNIFLWEAGPACYE*QWPRRS
Trigger: AGATCGTCTCGGCCACTGCCATTCATAACAAGCTGG...TCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGAAACTCTCGTACTGACTaGTTACACCATAAAAAGCCC +
Preference number: 4 (lower is better)
Translates to: NSIACKAETRRSPEEICRNSRTD*LHHKKP
Trigger: GGGCTTTTTATGGTGTAACCAGTCAGTACGAGAGTT...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATAAGTTGAATCTCTCCTaGCAAAAGAATCTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDKLNLS*QKNLPN
Trigger: ATTTGGGAGATTCTTTTGCCAGGAGAGATTCAACTT...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGACAGCCACGAGCACATaGACTAAAATACAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLETATST*TKIQSH
Trigger: GTGGCTCTGTATTTTAGTCCATGTGCTCGTGGCTGT...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526600.1
CDS-3UTR CCA 90 bp TTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCACTGGTCTTCCCAATTTaGGAGAGGTCAGGCTTAGTG +
Preference number: 4 (lower is better)
Translates to: LCKPDKCALSFEWKRKSPLVFPI*ERSGLV
Trigger: CACTAAGCCTGACCTCTCCCAAATTGGGAAGACCAG...TGGAGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GATGCAGGAAATAAGAGCAAAAGAAACATCCCTAAGAGGGGTGTTCAACAGAAGCTGTCACTAACCAGCTaGGTGACTCTAAACATGTCA +
Preference number: 4 (lower is better)
Translates to: DAGNKSKRNIPKRGVQQKLSLTS*VTLNMS
Trigger: TGACATGTTTAGAGTCACCCAGCTGGTTAGTGACAG...CTTCTGTTGAACACCCCTCTTAGGGATGTTTCTTTTGCTCTTATTTCCTGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp AAGTTGCAACCTTTTGTTTTGGTATATACATTTGAGTGTGGTGAAAGAACTGACCAGGACACTTCAGTGTaGGAAGCAGCATCCGGTGAG +
Preference number: 4 (lower is better)
Translates to: KLQPFVLVYTFECGERTDQDTSV*EAASGE
Trigger: CTCACCGGATGCTGCTTCCCACACTGAAGTGTCCTG...GTCAGTTCTTTCACCACACTCAAATGTATATACCAAAACAAAAGGTTGCAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp TTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAACAGAGGCCTGTGGTTaGTTACTCATCCCGGTAAAC +
Preference number: 4 (lower is better)
Translates to: LCAHVPTTYKNIFLWEAGTEACG*LLIPVN
Trigger: GTTTACCGGGATGAGTAACCAACCACAGGCCTCTGT...TCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTGCACTGTCATTTGAATaGAAAAGAAAGTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILALSFE*KRKSPQ
Trigger: CTGTGGAGACTTTCTTTTCCATTCAAATGACAGTGC...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTGTGAACAAACACACGTaGCGAAAACCGATTTACATA +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILVNKHT*RKPIYI
Trigger: TATGTAAATCGGTTTTCGCCACGTGTGTTTGTTCAC...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCGCCCCAGCATCATCTTaGATATTGCAGTTTAAATCA +
Preference number: 4 (lower is better)
Translates to: ALPVLSPVKHLREITQNIAPASS*ILQFKS
Trigger: TGATTTAAACTGCAATATTCAAGATGATGCTGGGGC...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGCAGCACCTAGCAAACTaGGTGACACTAAACAAGTGT +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLEQHLAN*VTLNKC
Trigger: ACACTTGTTTAGTGTCACTCAGTTTGCTAGGTGCTG...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCCTTAGATTGGAAAGTTaGATCTCTCCTGGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: ALPVLSPVKHLREITQNILRLES*ISPGKR
Trigger: TCTTTTGCCAGGAGAGATTCAACTTTCCAATCTAAG...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTCCACAAGATGCTGACTaGTGTAATAATAGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILPQDAD*CNNRKA
Trigger: TGCTTTTCTATTATTACATCAGTCAGCATCTTGTGG...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTAGGAAGAAGGCATTTTaGGGGCCCTTTCCAAACAGT +
Preference number: 4 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSRKKAF*GPFPNS
Trigger: ACTGTTTGGAAAGGGCCCTCAAAATGCCTTCTTCCT...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGCAAATGTGGTCATTGTaGCCTGTAACATCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLEQMWSL*PVTSWA
Trigger: TGCCCAAGATGTTACAGGTCACAATGACCACATTTG...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCACCTGTCCACACATTCTaGGGGATTAAGCTTAGAGCA +
Preference number: 4 (lower is better)
Translates to: LCKPDKCALSFEWKRKSPPVHTF*GIKLRA
Trigger: TGCTCTAAGCTTAATCCCTCAGAATGTGTGGACAGG...TGGAGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGAAGCCACCACAGTACTaGAACCTTAAGAAGACTTGG +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLEKPPQY*NLKKTW
Trigger: CCAAGTCTTCTTAAGGTTTCAGTACTGTGGTGGCTT...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGAGGGCCAATTCGTAAATaGACATTAGGAATTGGTGTA +
Preference number: 4 (lower is better)
Translates to: NSIACKAETRRSPEEICRGPIRK*TLGIGV
Trigger: TACACCAATTCCTAATGTTCATTTACGAATTGGCCC...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAATCTGGGTCTCGCTGCTaGTCGAGAAAAGCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKSGSRC*SRKAEN
Trigger: ATTTTCAGCTTTTCTCGAGCAGCAGCGAGACCCAGA...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTGAGTCTGGGTCTCGCTaGTGCTCGAGAAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFESGSR*CSRKAE
Trigger: TTCAGCTTTTCTCGAGCAGCAGCGAGACCCAGACTC...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGACTCTGCCTGGGCAATaGTCTGGAATACTTAGATTG +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLETLPGQ*SGILRL
Trigger: CAATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGT...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTCAGGGCCTTATCCTTTaGAGTCTGATCCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSQGLIL*SLILEG
Trigger: ACCTTCAAGGATCAGACTGCAAAGGATAAGGCCCTG...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526600.1
CDS-3UTR GCA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATCATCATCTTGAATATTaGAGTTTAAATCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: HLATSNQLCLGNALEYLDHHLEY*SLNQPR
Trigger: TCTGGGCTGATTTAAACTGCAATATTCAAGATGATG...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGTCCCCGTCTCTGTaGCAACAGAGTTGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKLSPSL*QQSCPL
Trigger: TAGAGGACAACTCTGTTGGCACAGAGACGGGGACAG...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATCTGGCCTCCAAACTCTaGAGTGACAACACAAGATGG +
Preference number: 4 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYLASKL*SDNTRW
Trigger: CCATCTTGTGTTGTCACTGCAGAGTTTGGAGGCCAG...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATTATGAGGGAAATGAATaGCCAGAGACCAGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYYEGNE*PETRAP
Trigger: TGGGGCTCTGGTCTCTGGGCATTCATTTCCCTCATA...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCTGTAAACCAGATAAGTaGGCACTGTCATTTGAATGG +
Preference number: 4 (lower is better)
Translates to: ALPVLSPVKHLREITQNICKPDK*ALSFEW
Trigger: CCATTCAAATGACAGTGCGCACTTATCTGGTTTACA...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp AAGTTGCAACCTTTTGTTTTGGTATATACATTTGAGTGTGGTGAAAGAACTGACTGTTATGAATGGCAGTaGCCGAGACGATCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: KLQPFVLVYTFECGERTDCYEWQ*PRRSGL
Trigger: CAGCCCAGATCGTCTCGGCCACTGCCATTCATAACA...GTCAGTTCTTTCACCACACTCAAATGTATATACCAAAACAAAAGGTTGCAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGACATATATTCACACATTaGGGAGCGGTTTATTCGGTA +
Preference number: 4 (lower is better)
Translates to: NSIACKAETRRSPEEICRHIFTH*GAVYSV
Trigger: TACCGAATAAACCGCTCCCCAATGTGTGAATATATG...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp TTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCACAAACCAACTCTGCCTaGGCAATGCTCTGGAATACT +
Preference number: 4 (lower is better)
Translates to: LCKPDKCALSFEWKRKSPQTNSA*AMLWNT
Trigger: AGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTG...TGGAGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTATAACTCAAAACATCTaGCCACATCAAACCAACTCT +
Preference number: 4 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILITQNI*PHQTNS
Trigger: AGAGTTGGTTTGATGTGGCCAGATGTTTTGAGTTAT...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGCCTCTCAACATTTACTaGGAAGACCCAATGGGGCAA +
Preference number: 4 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTPLNIY*EDPMGQ
Trigger: TTGCCCCATTGGGTCTTCCCAGTAAATGTTGAGAGG...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526600.1
CDS-3UTR CCA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTTTTGTTGTACGAGTCTaGGTCTCGCTGCTGCTCGAG +
Preference number: 4 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFFVVRV*VSLLLE
Trigger: CTCGAGCAGCAGCGAGACCCAGACTCGTACAACAAA...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAACCCAAAGGTCTAATCTaGGAGAGACAAAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKPKGLI*ERQREA
Trigger: GGCTTCTCTTTGTCTCTCCCAGATTAGACCTTTGGG...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAATCCCTGTTTAGGCTGTaGAAAACTGGCCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKSLFRL*KTGLQT
Trigger: AGTTTGGAGGCCAGTTTTCCACAGCCTAAACAGGGA...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTGTGAACAGAGGCCTGTaGTTGGTTACTCATCCCGGT +
Preference number: 4 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFVNRGL*LVTHPG
Trigger: ACCGGGATGAGTAACCAACCACAGGCCTCTGTTCAC...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CAA 72 bp AGGTCAAATCAGAAACACTCTTTAAACAGGTGTGAGTaGATTAAAGGGATGATGGTGACCAGCTGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: RSNQKHSLNRCE*IKGMMVTSCSQ
Trigger: TTGGGAACAGCTGGTCACCATCATCCCTTTAATCAACTCACACCTGTTTAAAGAGTGTTTCTGATTTGACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CAA 72 bp AGGCACTGCTTACGGGAACACTTTGGCAGCTCTGAATaGAAAACTTCCTACAAAAGTAACAGTAGTAAGAGA +
Preference number: 4 (lower is better)
Translates to: RHCLREHFGSSE*KTSYKSNSSKR
Trigger: TCTCTTACTACTGTTACTTTTGTAGGAAGTTTTCAATTCAGAGCTGCCAAAGTGTTCCCGTAAGCAGTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp AAGTTGCAACCTTTTGTTTTGGTATATACATTTGAGTGTGGTGAAAGAACTGACCTGCTCGAGAAAAGCTaGAAATTCCACCAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: KLQPFVLVYTFECGERTDLLEKS*KFHQAK
Trigger: CTTCGCCTGGTGGAATTTTCAGCTTTTCTCGAGCAG...GTCAGTTCTTTCACCACACTCAAATGTATATACCAAAACAAAAGGTTGCAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTCTGCTCGAGAAAAGCTaGAAATTCCACCAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFLLEKS*KFHQAK
Trigger: CTTCGCCTGGTGGAATTTTCAGCTTTTCTCGAGCAG...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCAGCCCCAGCATCATCTTaGATATTGCAGTTTAAATCA +
Preference number: 4 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGAAPASS*ILQFKS
Trigger: TGATTTAAACTGCAATATTCAAGATGATGCTGGGGC...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGTCCGTGTTCACTATTTaGAACTTCAAACACACAGGC +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLESVFTI*NFKHTG
Trigger: GCCTGTGTGTTTGAAGTTTCAAATAGTGAACACGGA...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp TTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGACAGCACCTAGCAAACTaGGTGACACTAAACAAGTGT +
Preference number: 4 (lower is better)
Translates to: LCAHVPTTYKNIFLWEAGQHLAN*VTLNKC
Trigger: ACACTTGTTTAGTGTCACTCAGTTTGCTAGGTGCTG...TCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp AGATTAGATGTTGTGATGCCAATCTCACCCAAAGGTCTAATCTGGGAGAGACAAAGTACTGTAACTTACTaGGAGACGCTAAAGAAATGG +
Preference number: 4 (lower is better)
Translates to: RLDVVMPISPKGLIWERQSTVTY*ETLKKW
Trigger: CCATTTCTTTAGCGTCTCTCAGTAAGTTACAGTACT...TTGTCTCTCCCAGATTAGACCTTTGGGTGAGATTGGCATCACAACATCTAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCAAAGAATCTCCCAAATaGGCCTATTTGAAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: ALPVLSPVKHLREITQNIKESPK*AYLKRS
Trigger: TGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTT...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATAGGAAGAAGGCATTTTaGGGGCCCTTTCCAAACAGT +
Preference number: 4 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYRKKAF*GPFPNS
Trigger: ACTGTTTGGAAAGGGCCCTCAAAATGCCTTCTTCCT...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTTTCCTGGGTAGAATATaGACCAGACAGCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFFLGRI*TRQLSH
Trigger: GTGGGAGAGCTGTCTGGTTCATATTCTACCCAGGAA...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCTTGGCAGCTCTGAATTaGAAACTTCCTACAAAAGTA +
Preference number: 4 (lower is better)
Translates to: ALPVLSPVKHLREITQNILAALN*KLPTKV
Trigger: TACTTTTGTAGGAAGTTTTCAATTCAGAGCTGCCAA...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAAGTGCGCACTGTCATTTaGATGGAAAAGAAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKVRTVI*MEKKVS
Trigger: GGAGACTTTCTTTTCCATTCAAATGACAGTGCGCAC...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCAGAAAATGCCAAATTGTaGATGGTGCTCTTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGAENAKL*MVLFGS
Trigger: ACTTCCAAAGAGCACCATTCACAATTTGGCATTTTC...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGCCCATTTTATACACGTaGCACAAAGACACAGACCGT +
Preference number: 4 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTPILYT*HKDTDR
Trigger: ACGGTCTGTGTCTTTGTGTCACGTGTATAAAATGGG...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATGTCAATTGGCTTATCTaGAGAGTCACTCATCCTTTC +
Preference number: 4 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDVNWLI*RVTHPF
Trigger: GAAAGGATGAGTGACTCTGCAGATAAGCCAATTGAC...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAAACTCTGCCTGGGCAATaGTCTGGAATACTTAGATTG +
Preference number: 4 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKTLPGQ*SGILRL
Trigger: CAATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGT...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACATCAAACCAACTCTaGCTGGGCAATGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYTSNQL*LGNALE
Trigger: TTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGT...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp TCATTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTTTGGCATGCCCAATGTaGACGAAGAGGTGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: SLCKPDKCALSFEWKRKSLACPM*TKRCLL
Trigger: CAACAAACACCTCTTCGTGCACATTGGGCATGCCAA...AGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAAGCTTTTAGCCATTTGTaGTCGCCTGGTCATAAACTC +
Preference number: 4 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKAFSHL*SPGHKL
Trigger: GAGTTTATGACCAGGCGAGCACAAATGGCTAAAAGC...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp TTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGACCCAGAAAACTCAACTaGAAAGGCATTCTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: LCAHVPTTYKNIFLWEAGPRKLN*KGILSK
Trigger: CTTGCTCAGAATGCCTTTGCAGTTGAGTTTTCTGGG...TCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp AAGTTGCAACCTTTTGTTTTGGTATATACATTTGAGTGTGGTGAAAGAACTGACATGTCACCTGCCTCTTaGAAGGCTCTAGGAGAGATG +
Preference number: 4 (lower is better)
Translates to: KLQPFVLVYTFECGERTDMSPAS*KALGEM
Trigger: CATCTCTCCTAGAGCCTTGCAAGAGGCAGGTGACAT...GTCAGTTCTTTCACCACACTCAAATGTATATACCAAAACAAAAGGTTGCAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATAAGGAGAGTAGACTGTaGTTTCAGCTCAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDKESRL*FQLKTE
Trigger: TTCTGTCTTGAGCTGAAAGCACAGTCTACTCTCCTT...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp AAGTTGCAACCTTTTGTTTTGGTATATACATTTGAGTGTGGTGAAAGAACTGACGCCAGCTTTCCTACCTaGTTGTGGATGCCTCAGATA +
Preference number: 4 (lower is better)
Translates to: KLQPFVLVYTFECGERTDASFPT*LWMPQI
Trigger: TATCTGAGGCATCCACAAGCAGGTAGGAAAGCTGGC...GTCAGTTCTTTCACCACACTCAAATGTATATACCAAAACAAAAGGTTGCAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp AAGTTGCAACCTTTTGTTTTGGTATATACATTTGAGTGTGGTGAAAGAACTGACTTTGGCTGGTCTGAGTaGAGGACTTTGCTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: KLQPFVLVYTFECGERTDFGWSE*RTLLLG
Trigger: TCCTAGCAGCAAAGTCCTGCACTCAGACCAGCCAAA...GTCAGTTCTTTCACCACACTCAAATGTATATACCAAAACAAAAGGTTGCAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp TCATTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTGGCAGCCTTTTGCACTaGATACCCTACATGCAACAT +
Preference number: 4 (lower is better)
Translates to: SLCKPDKCALSFEWKRKSGSLLH*IPYMQH
Trigger: ATGTTGCATGTAGGGTATGCAGTGCAAAAGGCTGCC...AGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp AAGTTGCAACCTTTTGTTTTGGTATATACATTTGAGTGTGGTGAAAGAACTGACTCTGAGGCAGCCTTTTaGACTGCATACCCTACATGC +
Preference number: 4 (lower is better)
Translates to: KLQPFVLVYTFECGERTDSEAAF*TAYPTC
Trigger: GCATGTAGGGTATGCAGTGCAAAAGGCTGCCTCAGA...GTCAGTTCTTTCACCACACTCAAATGTATATACCAAAACAAAAGGTTGCAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGGTATTACTAAGGCACTaGTTACGGGAACACTTTGGC +
Preference number: 4 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTVLLRH*LREHFG
Trigger: GCCAAAGTGTTCCCGTAAGCAGTGCCTTAGTAATAC...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp GATGCAGGAAATAAGAGCAAAAGAAACATCCCTAAGAGGGGTGTTCAACAGAAGTGTAAACCAGATAAGTaGGCACTGTCATTTGAATGG +
Preference number: 4 (lower is better)
Translates to: DAGNKSKRNIPKRGVQQKCKPDK*ALSFEW
Trigger: CCATTCAAATGACAGTGCGCACTTATCTGGTTTACA...CTTCTGTTGAACACCCCTCTTAGGGATGTTTCTTTTGCTCTTATTTCCTGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATTTCCAAGCCGAAGCCTaGAGCCTTTTCAAGAAAATA +
Preference number: 4 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDFQAEA*SLFKKI
Trigger: TATTTTCTTGAAAAGGCTCCAGGCTTCGGCTTGGAA...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGTGCTGGGCTCAATTTTaGCGGTGGGATTTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKCWAQF*RWDFPS
Trigger: GCTTGGAAAATCCCACCGCCAAAATTGAGCCCAGCA...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGCACGAGATTTCCTTCTaGCAAGAACCTGAATGTGAC +
Preference number: 4 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTHEISF*QEPECD
Trigger: GTCACATTCAGGTTCTTGCCAGAAGGAAATCTCGTG...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp AAGTTGCAACCTTTTGTTTTGGTATATACATTTGAGTGTGGTGAAAGAACTGACCCAGCTTGTTATGAATaGCAGTGGCCGAGACGATCT +
Preference number: 4 (lower is better)
Translates to: KLQPFVLVYTFECGERTDPACYE*QWPRRS
Trigger: AGATCGTCTCGGCCACTGCCATTCATAACAAGCTGG...GTCAGTTCTTTCACCACACTCAAATGTATATACCAAAACAAAAGGTTGCAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCCAGCTTGTTATGAATaGCAGTGGCCGAGACGATCT +
Preference number: 4 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKPACYE*QWPRRS
Trigger: AGATCGTCTCGGCCACTGCCATTCATAACAAGCTGG...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATAACTCTCGTACTGACTaGTTACACCATAAAAAGCCC +
Preference number: 4 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDNSRTD*LHHKKP
Trigger: GGGCTTTTTATGGTGTAACCAGTCAGTACGAGAGTT...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp AGATTAGATGTTGTGATGCCAATCTCACCCAAAGGTCTAATCTGGGAGAGACAACATATATTCACACATTaGGGAGCGGTTTATTCGGTA +
Preference number: 4 (lower is better)
Translates to: RLDVVMPISPKGLIWERQHIFTH*GAVYSV
Trigger: TACCGAATAAACCGCTCCCCAATGTGTGAATATATG...TTGTCTCTCCCAGATTAGACCTTTGGGTGAGATTGGCATCACAACATCTAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGACGCTAAAGAAATaGATGTGCTTCAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLEETLKK*MCFKRM
Trigger: CATCCTCTTGAAGCACATCCATTTCTTTAGCGTCTC...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATCAAACCAACTCTGCCTaGGCAATGCTCTGGAATACT +
Preference number: 4 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYQTNSA*AMLWNT
Trigger: AGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTG...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCAAAAAACATATTTCTTTaGGAAGCTGGAGGAGCACTC +
Preference number: 4 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGAKNIFL*EAGGAL
Trigger: GAGTGCTCCTCCAGCTTCCCAAAGAAATATGTTTTT...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp AGATTAGATGTTGTGATGCCAATCTCACCCAAAGGTCTAATCTGGGAGAGACAAAAAAACATATTTCTTTaGGAAGCTGGAGGAGCACTC +
Preference number: 4 (lower is better)
Translates to: RLDVVMPISPKGLIWERQKNIFL*EAGGAL
Trigger: GAGTGCTCCTCCAGCTTCCCAAAGAAATATGTTTTT...TTGTCTCTCCCAGATTAGACCTTTGGGTGAGATTGGCATCACAACATCTAATCT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGTTAATACATAACGCATaGCTACCAGGCAGGTTACAC +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLELIHNA*LPGRLH
Trigger: GTGTAACCTGCCTGGTAGCCATGCGTTATGTATTAA...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526600.1
CDS-3UTR CCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATAATGGGCATTCCAAATaGGGACAGTTTTGCACTTTC +
Preference number: 4 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDNGHSK*GQFCTF
Trigger: GAAAGTGCAAAACTGTCCCCATTTGGAATGCCCATT...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATAGTTCTAGGACAGCTTaGCTTTTAGCCATTTGTGCT +
Preference number: 4 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDSSRTA*LLAICA
Trigger: AGCACAAATGGCTAAAAGCCAAGCTGTCCTAGAACT...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp AGAACTGACTTGTGTCCAGTTTCGGATTTTACACCAAGCAGTCAGTTTCCTATAAGTTCTAGGACAGCTTaGCTTTTAGCCATTTGTGCT +
Preference number: 4 (lower is better)
Translates to: RTDLCPVSDFTPSSQFPISSRTA*LLAICA
Trigger: AGCACAAATGGCTAAAAGCCAAGCTGTCCTAGAACT...TATAGGAAACTGACTGCTTGGTGTAAAATCCGAAACTGGACACAAGTCAGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCAGAAAAGTACCATTCCTaGGTAGAATATGAACCAGAC +
Preference number: 4 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGAEKYHS*VEYEPD
Trigger: GTCTGGTTCATATTCTACCCAGGAATGGTACTTTTC...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAAATCTTAGCCCTCTTCTaGTACCAATCCTTCCATCCT +
Preference number: 4 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKILALF*YQSFHP
Trigger: AGGATGGAAGGATTGGTACCAGAAGAGGGCTAAGAT...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp TTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCAATCTTAGCCCTCTTCTaGTACCAATCCTTCCATCCT +
Preference number: 4 (lower is better)
Translates to: LCKPDKCALSFEWKRKSPILALF*YQSFHP
Trigger: AGGATGGAAGGATTGGTACCAGAAGAGGGCTAAGAT...TGGAGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTTTTCCTACCTGCTTGTaGATGCCTCAGATAGCAATG +
Preference number: 4 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSFPTCL*MPQIAM
Trigger: CATTGCTATCTGAGGCATCCACAAGCAGGTAGGAAA...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp AAGTTGCAACCTTTTGTTTTGGTATATACATTTGAGTGTGGTGAAAGAACTGACCCTCAGGAAGTAAAATaGCTCGCCAGCTTTCCTACC +
Preference number: 4 (lower is better)
Translates to: KLQPFVLVYTFECGERTDPQEVK*LASFPT
Trigger: GGTAGGAAAGCTGGCGAGCCATTTTACTTCCTGAGG...GTCAGTTCTTTCACCACACTCAAATGTATATACCAAAACAAAAGGTTGCAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp AAGTTGCAACCTTTTGTTTTGGTATATACATTTGAGTGTGGTGAAAGAACTGACACAGAGGCCTGTGGTTaGTTACTCATCCCGGTAAAC +
Preference number: 4 (lower is better)
Translates to: KLQPFVLVYTFECGERTDTEACG*LLIPVN
Trigger: GTTTACCGGGATGAGTAACCAACCACAGGCCTCTGT...GTCAGTTCTTTCACCACACTCAAATGTATATACCAAAACAAAAGGTTGCAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAAATTTCTTCCACACTGTaGTATAGTGCTGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKISSTL*YSAGRE
Trigger: TTCCCTGCCAGCACTATACCACAGTGTGGAAGAAAT...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGCCCCAGCATCATCTTaGATATTGCAGTTTAAATCA +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLEAPASS*ILQFKS
Trigger: TGATTTAAACTGCAATATTCAAGATGATGCTGGGGC...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAATCCGTGTTCACTATTTaGAACTTCAAACACACAGGC +
Preference number: 4 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKSVFTI*NFKHTG
Trigger: GCCTGTGTGTTTGAAGTTTCAAATAGTGAACACGGA...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCAAGTCTACAGACACATTaGGATATACGTACATATCAG +
Preference number: 4 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGASLQTH*DIRTYQ
Trigger: CTGATATGTACGTATATCTCAATGTGTCTGTAGACT...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGAGTACTGTAACTTACTaGGAGACGCTAAAGAAATGG +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLESTVTY*ETLKKW
Trigger: CCATTTCTTTAGCGTCTCTCAGTAAGTTACAGTACT...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp GATGCAGGAAATAAGAGCAAAAGAAACATCCCTAAGAGGGGTGTTCAACAGAAGAAAGAATCTCCCAAATaGGCCTATTTGAAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: DAGNKSKRNIPKRGVQQKKESPK*AYLKRS
Trigger: TGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTT...CTTCTGTTGAACACCCCTCTTAGGGATGTTTCTTTTGCTCTTATTTCCTGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCAAAAGAATCTCCCAAATaGGCCTATTTGAAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGAKESPK*AYLKRS
Trigger: TGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTT...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGCTTAGATTGGAAAGTTaGATCTCTCCTGGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLELRLES*ISPGKR
Trigger: TCTTTTGCCAGGAGAGATTCAACTTTCCAATCTAAG...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATCTTAGATTGGAAAGTTaGATCTCTCCTGGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDLRLES*ISPGKR
Trigger: TCTTTTGCCAGGAGAGATTCAACTTTCCAATCTAAG...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp AAGTTGCAACCTTTTGTTTTGGTATATACATTTGAGTGTGGTGAAAGAACTGACCTGACGAATGTCCACTaGTTCAAGCAATGGGTCACT +
Preference number: 4 (lower is better)
Translates to: KLQPFVLVYTFECGERTDLTNVH*FKQWVT
Trigger: AGTGACCCATTGCTTGAATCAGTGGACATTCGTCAG...GTCAGTTCTTTCACCACACTCAAATGTATATACCAAAACAAAAGGTTGCAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTACAGTAGTCTGTTTATaGAGGGCAGAGGAGCACTGT +
Preference number: 4 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFTVVCL*RAEEHC
Trigger: ACAGTGCTCCTCTGCCCTTCATAAACAGACTACTGT...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TCATTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTTACCAAATAGAAATTTaGCTCAGAGCCTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SLCKPDKCALSFEWKRKSYQIEI*LRACGW
Trigger: CCAGCCACAGGCTCTGAGTCAAATTTCTATTTGGTA...AGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGTCGTTCGGGGACTTTTaGCACCAAGTACTTGGAATG +
Preference number: 4 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKSFGDF*HQVLGM
Trigger: CATTCCAAGTACTTGGTGTCAAAAGTCCCCGAACGA...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAATCTGATGGAATCTaGCCCCATTTCATGATAAAC +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLEESDGI*PHFMIN
Trigger: GTTTATCATGAAATGGGGTCAGATTCCATCAGATTC...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGGCTCCAGACCCCTTCTaGATCATTGTCAATTGGCTT +
Preference number: 4 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKAPDPF*IIVNWL
Trigger: AAGCCAATTGACAATGATGCAGAAGGGGTCTGGAGC...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAACTTTGCATCTCACAGTaGAGTATTCCGTATTCATGC +
Preference number: 4 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKLCISQ*SIPYSC
Trigger: GCATGAATACGGAATACTGCACTGTGAGATGCAAAG...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACTCTGCCTGGGCAATaGTCTGGAATACTTAGATTG +
Preference number: 4 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYTLPGQ*SGILRL
Trigger: CAATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGT...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCATCATGTTCTATTGTGTaGACATGTTCCTACCACTTA +
Preference number: 4 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGASCSIV*TCSYHL
Trigger: TAAGTGGTAGGAACATGTGCACACAATAGAACATGA...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTTTGGCATGCCCAATGTaGACGAAGAGGTGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFLACPM*TKRCLL
Trigger: CAACAAACACCTCTTCGTGCACATTGGGCATGCCAA...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAAAAATGGGGACAGTTTTaGACTTTCTCCTCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKKWGQF*TFSSGL
Trigger: AAGACCAGAGGAGAAAGTGCAAAACTGTCCCCATTT...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
40% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTAACTCTCGTACTGACTaGTTACACCATAAAAAGCCC +
Preference number: 4 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSNSRTD*LHHKKP
Trigger: GGGCTTTTTATGGTGTAACCAGTCAGTACGAGAGTT...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCACTGTAAGAATGGTTaGCATGCCCAATGTGCACGA +
Preference number: 4 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKHCKNG*HAQCAR
Trigger: TCGTGCACATTGGGCATGCCAACCATTCTTACAGTG...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp AGAACTGACTTGTGTCCAGTTTCGGATTTTACACCAAGCAGTCAGTTTCCTATAGAAAAGTACCATTCCTaGGTAGAATATGAACCAGAC +
Preference number: 4 (lower is better)
Translates to: RTDLCPVSDFTPSSQFPIEKYHS*VEYEPD
Trigger: GTCTGGTTCATATTCTACCCAGGAATGGTACTTTTC...TATAGGAAACTGACTGCTTGGTGTAAAATCCGAAACTGGACACAAGTCAGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGTCTAGCTGTTCTTCTTaGGTCCCAGTATTTTTGTGC +
Preference number: 4 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTSSCSS*VPVFLC
Trigger: GCACAAAAATACTGGGACCCAAGAAGAACAGCTAGA...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CAA 72 bp TTGGTATATACATTTGAGTGTGGTGAAAGAACTGACTaGTGTCCAGTTTCGGATTTTACACCAAGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LVYTFECGERTD*CPVSDFTPSSQ
Trigger: CTGACTGCTTGGTGTAAAATCCGAAACTGGACACAAGTCAGTTCTTTCACCACACTCAAATGTATATACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CAA 72 bp GAAGAACACTTCAATTTTAACGACCCTAACTCACTTTaGTTTTGTTCTGCACTGTCGTCTCAGTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: EEHFNFNDPNSL*FCSALSSQFEA
Trigger: AGCCTCAAACTGAGACGACAGTGCAGAACAAAACAAAAGTGAGTTAGGGTCGTTAAAATTGAAGTGTTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTCTTCGTCTGATAAGATaGTTTTCCTCCTCCCACATG +
Preference number: 4 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFLRLIR*FSSSHM
Trigger: CATGTGGGAGGAGGAAAATCATCTTATCAGACGAAG...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATTCCGTGTTCACTATTTaGAACTTCAAACACACAGGC +
Preference number: 4 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYSVFTI*NFKHTG
Trigger: GCCTGTGTGTTTGAAGTTTCAAATAGTGAACACGGA...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGGTATCCACAGGCTGGTaGGGATGCTTACAATTTTCT +
Preference number: 4 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKVSTGW*GCLQFS
Trigger: AGAAAATTGTAAGCATCCTCACCAGCCTGTGGATAC...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp AAGTTGCAACCTTTTGTTTTGGTATATACATTTGAGTGTGGTGAAAGAACTGACGTATCCACAGGCTGGTaGGGATGCTTACAATTTTCT +
Preference number: 4 (lower is better)
Translates to: KLQPFVLVYTFECGERTDVSTGW*GCLQFS
Trigger: AGAAAATTGTAAGCATCCTCACCAGCCTGTGGATAC...GTCAGTTCTTTCACCACACTCAAATGTATATACCAAAACAAAAGGTTGCAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCAGCACCTAGCAAACTaGGTGACACTAAACAAGTGT +
Preference number: 4 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKQHLAN*VTLNKC
Trigger: ACACTTGTTTAGTGTCACTCAGTTTGCTAGGTGCTG...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGAAAGAATCTCCCAAATaGGCCTATTTGAAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLEKESPK*AYLKRS
Trigger: TGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTT...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp TTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGACTTAGATTGGAAAGTTaGATCTCTCCTGGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: LCAHVPTTYKNIFLWEAGLRLES*ISPGKR
Trigger: TCTTTTGCCAGGAGAGATTCAACTTTCCAATCTAAG...TCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATCTAATGTTACAGGTGTaGACACTGACAAACAGAATT +
Preference number: 4 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDLMLQV*TLTNRI
Trigger: AATTCTGTTTGTCAGTGTTCACACCTGTAACATTAG...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGGGGCCAATTCGTAAATaGACATTAGGAATTGGTGTA +
Preference number: 4 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTGPIRK*TLGIGV
Trigger: TACACCAATTCCTAATGTTCATTTACGAATTGGCCC...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCAGAAAATGCCAAATTGTaGATGGTGCTCTTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LCKPDKCALSFEWKRKSPENAKL*MVLFGS
Trigger: ACTTCCAAAGAGCACCATTCACAATTTGGCATTTTC...TGGAGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTGAATCTGATGGAATCTaGCCCCATTTCATGATAAAC +
Preference number: 4 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSESDGI*PHFMIN
Trigger: GTTTATCATGAAATGGGGTCAGATTCCATCAGATTC...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TCATTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTTATCAAAGGAACCACTaGCCAGATGAAACGCTTACA +
Preference number: 4 (lower is better)
Translates to: SLCKPDKCALSFEWKRKSYQRNH*PDETLT
Trigger: TGTAAGCGTTTCATCTGGTCAGTGGTTCCTTTGATA...AGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCAACACAATGTTTCTGCTaGCTCCTGAAAATTTTCCAC +
Preference number: 4 (lower is better)
Translates to: LCKPDKCALSFEWKRKSPTQCFC*LLKIFH
Trigger: GTGGAAAATTTTCAGGAGTCAGCAGAAACATTGTGT...TGGAGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527636.7
CDS-3UTR GCA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGACTCTGCCTGGGCAATaGTCTGGAATACTTAGATTG +
Preference number: 4 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKTLPGQ*SGILRL
Trigger: CAATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGT...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGTCATGTTCTATTGTGTaGACATGTTCCTACCACTTA +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLESCSIV*TCSYHL
Trigger: TAAGTGGTAGGAACATGTGCACACAATAGAACATGA...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp AGAACTGACTTGTGTCCAGTTTCGGATTTTACACCAAGCAGTCAGTTTCCTATATCATGTTCTATTGTGTaGACATGTTCCTACCACTTA +
Preference number: 4 (lower is better)
Translates to: RTDLCPVSDFTPSSQFPISCSIV*TCSYHL
Trigger: TAAGTGGTAGGAACATGTGCACACAATAGAACATGA...TATAGGAAACTGACTGCTTGGTGTAAAATCCGAAACTGGACACAAGTCAGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTCCCAGAAAACTCAACTaGAAAGGCATTCTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFPRKLN*KGILSK
Trigger: CTTGCTCAGAATGCCTTTGCAGTTGAGTTTTCTGGG...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATGAGACGCTAAAGAAATaGATGTGCTTCAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYETLKK*MCFKRM
Trigger: CATCCTCTTGAAGCACATCCATTTCTTTAGCGTCTC...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGAAGTTGAATCTCTCCTaGCAAAAGAATCTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLEKLNLS*QKNLPN
Trigger: ATTTGGGAGATTCTTTTGCCAGGAGAGATTCAACTT...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp AGAACTGACTTGTGTCCAGTTTCGGATTTTACACCAAGCAGTCAGTTTCCTATAATAACTCAAAACATCTaGCCACATCAAACCAACTCT +
Preference number: 4 (lower is better)
Translates to: RTDLCPVSDFTPSSQFPIITQNI*PHQTNS
Trigger: AGAGTTGGTTTGATGTGGCCAGATGTTTTGAGTTAT...TATAGGAAACTGACTGCTTGGTGTAAAATCCGAAACTGGACACAAGTCAGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGGAGCATCTGATCCTTTAGCTTaGAATGAAAATCACGAGATT +
Preference number: 4 (lower is better)
Translates to: AHVPTTYKNIFLWEAGGASDPLA*NENHEI
Trigger: AATCTCGTGATTTTCATTCCAAGCTAAAGGATCAGA...TGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTTTGCACTTTCTCCTCTaGTCTTCCCAATTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFLHFLL*SSQFGR
Trigger: TCTCCCAAATTGGGAAGACCAGAGGAGAAAGTGCAA...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp TCATTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTTTTTTGGCTGGTGTTTaGCCTTCTTGTCCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: SLCKPDKCALSFEWKRKSFLAGV*PSCPFH
Trigger: GTGAAAAGGACAAGAAGGCCAAACACCAGCCAAAAA...AGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
3UTR CAA 72 bp CTCAGTTTGAGGCTTCCAACTTTCAAAATGGTATCATaGTGTAAACCAGATAAGTGCGCACTGTCATTTGAA +
Preference number: 4 (lower is better)
Translates to: LSLRLPTFKMVS*CKPDKCALSFE
Trigger: TTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGATACCATTTTGAAAGTTGGAAGCCTCAAACTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGAGTCTACAGACACATTaGGATATACGTACATATCAG +
Preference number: 4 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTSLQTH*DIRTYQ
Trigger: CTGATATGTACGTATATCTCAATGTGTCTGTAGACT...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGCCACAAGATGCTGACTaGTGTAATAATAGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTPQDAD*CNNRKA
Trigger: TGCTTTTCTATTATTACATCAGTCAGCATCTTGTGG...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp TTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCACTAATGTTACAGGTGTaGACACTGACAAACAGAATT +
Preference number: 4 (lower is better)
Translates to: LCKPDKCALSFEWKRKSPLMLQV*TLTNRI
Trigger: AATTCTGTTTGTCAGTGTTCACACCTGTAACATTAG...TGGAGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCAAACACCTGCAGGAACTaGCACAAAAATAGCATTTTT +
Preference number: 4 (lower is better)
Translates to: LCKPDKCALSFEWKRKSPNTCRN*HKNSIF
Trigger: AAAAATGCTATTTTTGTGTCAGTTCCTGCAGGTGTT...TGGAGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527636.7
CDS-3UTR GCA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTGTCAATTGGCTTATCTaGAGAGTCACTCATCCTTTC +
Preference number: 4 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFVNWLI*RVTHPF
Trigger: GAAAGGATGAGTGACTCTGCAGATAAGCCAATTGAC...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTAAGGAGAGTAGACTGTaGTTTCAGCTCAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFKESRL*FQLKTE
Trigger: TTCTGTCTTGAGCTGAAAGCACAGTCTACTCTCCTT...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGACTTTGCTGCTAGGATaGTTACCAAATAGAAATTTG +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLETLLLG*LPNRNL
Trigger: CAAATTTCTATTTGGTAAGCATCCTAGCAGCAAAGT...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATTGCATCATTGTCAATTaGCTTATCTGCAGAGTCACT +
Preference number: 4 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYCIIVN*LICRVT
Trigger: AGTGACTCTGCAGATAAGCCAATTGACAATGATGCA...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGGAGACGCTAAAGAAATaGATGTGCTTCAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKETLKK*MCFKRM
Trigger: CATCCTCTTGAAGCACATCCATTTCTTTAGCGTCTC...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTATAACTCAAAACATCTaGCCACATCAAACCAACTCT +
Preference number: 4 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSITQNI*PHQTNS
Trigger: AGAGTTGGTTTGATGTGGCCAGATGTTTTGAGTTAT...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATAAAAACATATTTCTTTaGGAAGCTGGAGGAGCACTC +
Preference number: 4 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYKNIFL*EAGGAL
Trigger: GAGTGCTCCTCCAGCTTCCCAAAGAAATATGTTTTT...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp TCATTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTAAAAACATATTTCTTTaGGAAGCTGGAGGAGCACTC +
Preference number: 4 (lower is better)
Translates to: SLCKPDKCALSFEWKRKSKNIFL*EAGGAL
Trigger: GAGTGCTCCTCCAGCTTCCCAAAGAAATATGTTTTT...AGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTAATGGGCATTCCAAATaGGGACAGTTTTGCACTTTC +
Preference number: 4 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFNGHSK*GQFCTF
Trigger: GAAAGTGCAAAACTGTCCCCATTTGGAATGCCCATT...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATGCACTGTCATTTGAATaGAAAAGAAAGTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYALSFE*KRKSPQ
Trigger: CTGTGGAGACTTTCTTTTCCATTCAAATGACAGTGC...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGACTTACAACTTGGAGTaGATAAGAATCACTCCTAAA +
Preference number: 4 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLETYNLE*IRITPK
Trigger: TTTAGGAGTGATTCTTATCCACTCCAAGTTGTAAGT...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGTTATCCTTTGCAGTCTaGTCCATGCTTGTTACCTTT +
Preference number: 4 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKLSFAV*SMLVTF
Trigger: AAAGGTAACAAGCATGGATCAGACTGCAAAGGATAA...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334310.10
CDS-3UTR TCA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATCCACAAGATGCTGACTaGTGTAATAATAGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYPQDAD*CNNRKA
Trigger: TGCTTTTCTATTATTACATCAGTCAGCATCTTGTGG...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATTTGGCAGCTCTGAATTaGAAACTTCCTACAAAAGTA +
Preference number: 4 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYLAALN*KLPTKV
Trigger: TACTTTTGTAGGAAGTTTTCAATTCAGAGCTGCCAA...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TCATTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTTATAAGCAACGGCTTTaGGAGAGAAAACTACTTTCA +
Preference number: 4 (lower is better)
Translates to: SLCKPDKCALSFEWKRKSYKQRL*ERKLLS
Trigger: TGAAAGTAGTTTTCTCTCTCAAAGCCGTTGCTTATA...AGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp AAGTTGCAACCTTTTGTTTTGGTATATACATTTGAGTGTGGTGAAAGAACTGACAAGTCATTTAGAATGTaGACAAACACACGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: KLQPFVLVYTFECGERTDKSFRM*TNTRGE
Trigger: TTCGCCACGTGTGTTTGTTCACATTCTAAATGACTT...GTCAGTTCTTTCACCACACTCAAATGTATATACCAAAACAAAAGGTTGCAACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR GCA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTCATCATCTTGAATATTaGAGTTTAAATCAGCCGAGT +
Preference number: 4 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSHHLEY*SLNQPS
Trigger: ACTCGGCTGATTTAAACTGCAATATTCAAGATGATG...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334310.10
ENST00000527575.6
CDS-3UTR GCA 90 bp TTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAAGATTCTGTATACTTTaGATCTCACAGTGCAGTATT +
Preference number: 4 (lower is better)
Translates to: LCAHVPTTYKNIFLWEAGRFCIL*ISQCSI
Trigger: AATACTGCACTGTGAGATGCAAAGTATACAGAATCT...TCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCATATATTCACACATTaGGGAGCGGTTTATTCGGTA +
Preference number: 4 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKHIFTH*GAVYSV
Trigger: TACCGAATAAACCGCTCCCCAATGTGTGAATATATG...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CCA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAATCTGATCCTTTAGCTTaGAATGAAAATCACGAGATT +
Preference number: 4 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKSDPLA*NENHEI
Trigger: AATCTCGTGATTTTCATTCCAAGCTAAAGGATCAGA...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527636.7
CDS-3UTR CCA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTACTTACAACTTGGAGTaGATAAGAATCACTCCTAAA +
Preference number: 4 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSTYNLE*IRITPK
Trigger: TTTAGGAGTGATTCTTATCCACTCCAAGTTGTAAGT...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR TCA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCCACAAGATGCTGACTaGTGTAATAATAGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKPQDAD*CNNRKA
Trigger: TGCTTTTCTATTATTACATCAGTCAGCATCTTGTGG...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR TCA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTTATAAGCAACGGCTTTaGGAGAGAAAACTACTTTCA +
Preference number: 4 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFYKQRL*ERKLLS
Trigger: TGAAAGTAGTTTTCTCTCTCAAAGCCGTTGCTTATA...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CCA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGAAGTTGAATCTCTCCTaGCAAAAGAATCTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKKLNLS*QKNLPN
Trigger: ATTTGGGAGATTCTTTTGCCAGGAGAGATTCAACTT...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR GCA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTCATCATCTTGAATATTaGAGTTTAAATCAGCCGAGT +
Preference number: 4 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFHHLEY*SLNQPS
Trigger: ACTCGGCTGATTTAAACTGCAATATTCAAGATGATG...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334310.10
ENST00000527575.6
CDS GCA 90 bp CCCGGCGAGTCCGAGGCAAACTTCGGCGCCGCTTCCCCCGCCCTCTaGTCGGTGCCCGGCTCCCTCCCCGGCTCCCGGTCCCTGGGCCCG +
Preference number: 5 (lower is better)
Translates to: PGESEANFGAASPAL*SVPGSLPGSRSLGP
Trigger: CGGGCCCAGGGACCGGGAGCCGGGGAGGGAGCCGGGCACCGAGCAGAGGGCGGGGGAAGCGGCGCCGAAGTTTGCCTCGGACTCGCCGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527376.3
ENST00000527636.7
CDS GCA 90 bp AGTCCGAGGCAAACTTCGGCGCCGCTTCCCCCGCCCTCTGCTCGGTaGCCGGCTCCCTCCCCGGCTCCCGGTCCCTGGGCCCGGCCACCC +
Preference number: 5 (lower is better)
Translates to: SPRQTSAPLPPPSAR*PAPSPAPGPWARPP
Trigger: GGGTGGCCGGGCCCAGGGACCGGGAGCCGGGGAGGGAGCCGGGCACCGAGCAGAGGGCGGGGGAAGCGGCGCCGAAGTTTGCCTCGGACT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527376.3
ENST00000527636.7
CDS CCA 90 bp TGTGAATCAAGTCTCCACCAGGAAGAGAGCTCCATCCTGCAGCAGTaGCACGGCAGCACCCTCAGCCCGCCAGAGTCAAGCTGGGGTTTT +
Preference number: 5 (lower is better)
Translates to: CESSLHQEESSILQQ*HGSTLSPPESSWGF
Trigger: AAAACCCCAGCTTGACTCTGGCGGGCTGAGGGTGCTGCCGTGCCACTGCTGCAGGATGGAGCTCTCTTCCTGGTGGAGACTTGATTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525312.1
CDS-3UTR CAA 90 bp GGGGACACCTGGGGCAATCCTTCACAGGCCAGCCTGGAATCAGGGACCCAACAGCCAAAGGAGCAAACTTaGGTGGAACAGGTGACTGTC +
Preference number: 5 (lower is better)
Translates to: GDTWGNPSQASLESGTQQPKEQT*VEQVTV
Trigger: GACAGTCACCTGTTCCACCAAAGTTTGCTCCTTTGG...CTGTTGGGTCCCTGATTCCAGGCTGGCCTGTGAAGGATTGCCCCAGGTGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp GAGAAGCCCACTGGGATGACTGGACCAGTGGTTAAGACAGGGAAAATATCTGTCAGTGTGCTATGGATGTaGGGAGGCCCCCAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: EKPTGMTGPVVKTGKISVSVLWM*GGPQWQ
Trigger: CTGCCACTGGGGGCCTCCCAACATCCATAGCACACT...GACAGATATTTTCCCTGTCTTAACCACTGGTCCAGTCATCCCAGTGGGCTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp GATGCAGGAAATAAGAGCAAAAGAAACATCCCTAAGAGGGGTGTTCAACAGAAGGAGTCTGCAAAGTGCTaGGTGGGCGCCCGCGGCGGG +
Preference number: 5 (lower is better)
Translates to: DAGNKSKRNIPKRGVQQKESAKC*VGARGG
Trigger: CCCGCCGCGGGCGCCCACCAAGCACTTTGCAGACTC...CTTCTGTTGAACACCCCTCTTAGGGATGTTTCTTTTGCTCTTATTTCCTGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527636.7
CDS TCA 90 bp GTGTTTGTTGTACGAGTCTGGGTCTCGCTGCTGCTCGAGAAAAGCTaGAAATTCCACCAGGCGAAGCTTGGTTGTGCCAATGGAGCGACC +
Preference number: 5 (lower is better)
Translates to: VFVVRVWVSLLLEKS*KFHQAKLGCANGAT
Trigger: GGTCGCTCCATTGGCACAACCAAGCTTCGCCTGGTGGAATTTTCAGCTTTTCTCGAGCAGCAGCGAGACCCAGACTCGTACAACAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp TTAGTGTTTTGCTGTTTCCCACGAGCCAGCCACATCCTCATGTTAGGGACCACATCCACCAGGCGAAGCTaGGTTGTGCCAATGGAGCGA +
Preference number: 5 (lower is better)
Translates to: LVFCCFPRASHILMLGTTSTRRS*VVPMER
Trigger: TCGCTCCATTGGCACAACCAAGCTTCGCCTGGTGGA...TGTGGTCCCTAACATGAGGATGTGGCTGGCTCGTGGGAAACAGCAAAACACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATTCCTGGCTGCCCTGTTaGAATCATTCCCGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: HLATSNQLCLGNALEYLDSWLPC*NHSRPE
Trigger: TTCTGGCCGGGAATGATTCAAACAGGGCAGCCAGGA...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTTCCACCAGGCGAAGCTaGGTTGTGCCAATGGAGCGA +
Preference number: 5 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILSTRRS*VVPMER
Trigger: TCGCTCCATTGGCACAACCAAGCTTCGCCTGGTGGA...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp GAGAAGCCCACTGGGATGACTGGACCAGTGGTTAAGACAGGGAAAATATCTGTCAATGGGGGCTGTTTTTaGGCTGGTCTGAGTGCAGGA +
Preference number: 5 (lower is better)
Translates to: EKPTGMTGPVVKTGKISVNGGCF*AGLSAG
Trigger: TCCTGCACTCAGACCAGCCAAAAAACAGCCCCCATT...GACAGATATTTTCCCTGTCTTAACCACTGGTCCAGTCATCCCAGTGGGCTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATCTGCTGGGCTCAATTTaGGCGGTGGGATTTTCCAAG +
Preference number: 5 (lower is better)
Translates to: HLATSNQLCLGNALEYLDLLGSI*AVGFSK
Trigger: CTTGGAAAATCCCACCGCCAAAATTGAGCCCAGCAG...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGGAGGAAGAAGGCATTTaGAGGGCCCTTTCCAAACAG +
Preference number: 5 (lower is better)
Translates to: GGESCSICPPAEILSFVQEEEGI*RALSKQ
Trigger: CTGTTTGGAAAGGGCCCTCAAAATGCCTTCTTCCTC...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp TTAGTGTTTTGCTGTTTCCCACGAGCCAGCCACATCCTCATGTTAGGGACCACAAACAGAGGCCTGTGGTaGGTTACTCATCCCGGTAAA +
Preference number: 5 (lower is better)
Translates to: LVFCCFPRASHILMLGTTNRGLW*VTHPGK
Trigger: TTTACCGGGATGAGTAACCAACCACAGGCCTCTGTT...TGTGGTCCCTAACATGAGGATGTGGCTGGCTCGTGGGAAACAGCAAAACACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGCCGAGATTCTGTCATTaGTGCAGAAGTCCCCTCATC +
Preference number: 5 (lower is better)
Translates to: GGESCSICPPAEILSFVQPRFCH*CRSPLI
Trigger: GATGAGGGGACTTCTGCACAAATGACAGAATCTCGG...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS TCA 90 bp GCTATCAATTCATTCCTACAGCGCCATCAGTTACATAAAAAGGCCTaGCTGTCCGACGCCACACTGTGCACCGAACAAGCACAGCAATTG +
Preference number: 5 (lower is better)
Translates to: AINSFLQRHQLHKKA*LSDATLCTEQAQQL
Trigger: CAATTGCTGTGCTTGTTCGGTGCACAGTGTGGCGTCGGACAGTCAGGCCTTTTTATGTAACTGATGGCGCTGTAGGAATGAATTGATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525312.1
CDS-3UTR CAA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTCTGCTGGGCTCAATTTaGGCGGTGGGATTTTCCAAG +
Preference number: 5 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILLLGSI*AVGFSK
Trigger: CTTGGAAAATCCCACCGCCAAAATTGAGCCCAGCAG...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGATCCTGGCTGCCCTGTTaGAATCATTCCCGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: NSIACKAETRRSPEEICRSWLPC*NHSRPE
Trigger: TTCTGGCCGGGAATGATTCAAACAGGGCAGCCAGGA...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp ACAAACACAACAGTTTCTGGGGTCCTTCCGCTGAAGTGTGCTATGGATGTTGGGCTTGGGCAACAGATCTaGACCAGGGATCATTTTGCA +
Preference number: 5 (lower is better)
Translates to: TNTTVSGVLPLKCAMDVGLGQQI*TRDHFA
Trigger: TGCAAAATGATCCCTGGTCAAGATCTGTTGCCCAAG...CCCAACATCCATAGCACACTTCAGCGGAAGGACCCCAGAAACTGTTGTGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGGTCGTTCGGGGACTTTaGACACCAAGTACTTGGAAT +
Preference number: 5 (lower is better)
Translates to: GGESCSICPPAEILSFVQVVRGL*TPSTWN
Trigger: ATTCCAAGTACTTGGTGTCAAAAGTCCCCGAACGAC...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATAGTGTGCTATGGATGTaGGGAGGCCCCCAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDSVLWM*GGPQWQ
Trigger: CTGCCACTGGGGGCCTCCCAACATCCATAGCACACT...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGAAACATGTGTGAGAATTaGCCCACGCCCACCCCCATC +
Preference number: 5 (lower is better)
Translates to: NSIACKAETRRSPEEICRNMCEN*PTPTPI
Trigger: GATGGGGGTGGGCGTGGGCAAATTCTCACACATGTT...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS TCA 90 bp CGAACAAGCACAGCAATTGTTTCAGCGGGCTGCACGGAGGAAGAATaGATAATTAGCGTCCTTGTGAATCAAGTCTCCACCAGGAAGAGA +
Preference number: 5 (lower is better)
Translates to: RTSTAIVSAGCTEEE*IISVLVNQVSTRKR
Trigger: TCTCTTCCTGGTGGAGACTTGATTCACAAGGACGCTAATTATTCATTCTTCCTCCGTGCAGCCCGCTGAAACAATTGCTGTGCTTGTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525312.1
CDS-3UTR CAA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGTCCACCAGGCGAAGCTaGGTTGTGCCAATGGAGCGA +
Preference number: 5 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLESTRRS*VVPMER
Trigger: TCGCTCCATTGGCACAACCAAGCTTCGCCTGGTGGA...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTCCAAAGGAGCAAACTTaGGTGGAACAGGTGACTGTC +
Preference number: 5 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILPKEQT*VEQVTV
Trigger: GACAGTCACCTGTTCCACCAAAGTTTGCTCCTTTGG...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCACCTTTCCCGAGGAATaGTGGGCTGCACATCTGAAG +
Preference number: 5 (lower is better)
Translates to: ALPVLSPVKHLREITQNITFPEE*WAAHLK
Trigger: CTTCAGATGTGCAGCCCACAATTCCTCGGGAAAGGT...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGGCGACTCAGTCTTTTTaGGACACAATGTTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: GGESCSICPPAEILSFVQATQSF*DTMFLL
Trigger: CAGCAGAAACATTGTGTCCAAAAAAGACTGAGTCGC...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527636.7
CDS-3UTR CAA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCTTTCTGGTCCTCGTCTaGCCTGTCCTGAGTTTGATG +
Preference number: 5 (lower is better)
Translates to: ALPVLSPVKHLREITQNIFLVLV*PVLSLM
Trigger: CATCAAACTCAGGACAGGCAAGACGAGGACCAGAAA...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATTCCTGGCTGCCCTGTTaGAATCATTCCCGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDSWLPC*NHSRPE
Trigger: TTCTGGCCGGGAATGATTCAAACAGGGCAGCCAGGA...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp TTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGACCAGGCGAAGCTTGGTaGTGCCAATGGAGCGACCTT +
Preference number: 5 (lower is better)
Translates to: LCAHVPTTYKNIFLWEAGPGEAW*CQWSDL
Trigger: AAGGTCGCTCCATTGGCACAACCAAGCTTCGCCTGG...TCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAACCAGGCGAAGCTTGGTaGTGCCAATGGAGCGACCTT +
Preference number: 5 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKPGEAW*CQWSDL
Trigger: AAGGTCGCTCCATTGGCACAACCAAGCTTCGCCTGG...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp TTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCATCCACCAGGCGAAGCTaGGTTGTGCCAATGGAGCGA +
Preference number: 5 (lower is better)
Translates to: LCKPDKCALSFEWKRKSPSTRRS*VVPMER
Trigger: TCGCTCCATTGGCACAACCAAGCTTCGCCTGGTGGA...TGGAGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCCCAAAGGAGCAAACTTaGGTGGAACAGGTGACTGTC +
Preference number: 5 (lower is better)
Translates to: ALPVLSPVKHLREITQNIPKEQT*VEQVTV
Trigger: GACAGTCACCTGTTCCACCAAAGTTTGCTCCTTTGG...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp AACAGCATTGCTTGTAAGGCAGAAACTAGAAGAAGCCCAGAGGAAATATGCCGAGAGGAAGAAGGCATTTaGAGGGCCCTTTCCAAACAG +
Preference number: 5 (lower is better)
Translates to: NSIACKAETRRSPEEICREEEGI*RALSKQ
Trigger: CTGTTTGGAAAGGGCCCTCAAAATGCCTTCTTCCTC...TCGGCATATTTCCTCTGGGCTTCTTCTAGTTTCTGCCTTACAAGCAATGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp AGATTAGATGTTGTGATGCCAATCTCACCCAAAGGTCTAATCTGGGAGAGACAAGTCAGGCTTAGTGTTTaGCTGTTTCCCACGAGCCAG +
Preference number: 5 (lower is better)
Translates to: RLDVVMPISPKGLIWERQVRLSV*LFPTSQ
Trigger: CTGGCTCGTGGGAAACAGCAAAACACTAAGCCTGAC...TTGTCTCTCCCAGATTAGACCTTTGGGTGAGATTGGCATCACAACATCTAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTCAAATGGGGACAGTTTaGCACTTTCTCCTCTGGTCT +
Preference number: 5 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILQMGTV*HFLLWS
Trigger: AGACCAGAGGAGAAAGTGCAAAACTGTCCCCATTTG...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp GAGAAGCCCACTGGGATGACTGGACCAGTGGTTAAGACAGGGAAAATATCTGTCAGTGCGCACTGTCATTaGAATGGAAAAGAAAGTCTC +
Preference number: 5 (lower is better)
Translates to: EKPTGMTGPVVKTGKISVSAHCH*NGKESL
Trigger: GAGACTTTCTTTTCCATTCAAATGACAGTGCGCACT...GACAGATATTTTCCCTGTCTTAACCACTGGTCCAGTCATCCCAGTGGGCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATGTCAGGCTTAGTGTTTaGCTGTTTCCCACGAGCCAG +
Preference number: 5 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDVRLSV*LFPTSQ
Trigger: CTGGCTCGTGGGAAACAGCAAAACACTAAGCCTGAC...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp GATGCAGGAAATAAGAGCAAAAGAAACATCCCTAAGAGGGGTGTTCAACAGAAGTCTGAGTGCAGGACTTaGCTGCTAGGATGCTTACCA +
Preference number: 5 (lower is better)
Translates to: DAGNKSKRNIPKRGVQQKSECRT*LLGCLP
Trigger: TGGTAAGCATCCTAGCAGCAAAGTCCTGCACTCAGA...CTTCTGTTGAACACCCCTCTTAGGGATGTTTCTTTTGCTCTTATTTCCTGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATGCCATGTGCAGGGCTTaGCCACAGAAACACCAACAT +
Preference number: 5 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDAMCRA*PQKHQH
Trigger: ATGTTGGTGTTTCTGTGGCAAAGCCCTGCACATGGC...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATGGTGAAAGAACTGACTaGTGTCCAGTTTCGGATTTT +
Preference number: 5 (lower is better)
Translates to: HLATSNQLCLGNALEYLDGERTD*CPVSDF
Trigger: AAAATCCGAAACTGGACACAAGTCAGTTCTTTCACC...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp GGAGGAGAAAGCTGTAGTATCTGTCCACCAGCCGAGATTCTGTCATTTGTGCAGGGGCTGGAACATTCTTaGAAAATGCCAAATTGTGAA +
Preference number: 5 (lower is better)
Translates to: GGESCSICPPAEILSFVQGLEHS*KMPNCE
Trigger: TTCACAATTTGGCATTTTCAAAGAATGTTCCAGCCC...CTGCACAAATGACAGAATCTCGGCTGGTGGACAGATACTACAGCTTTCTCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp TTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAAACATGTGTGAGAATTaGCCCACGCCCACCCCCATC +
Preference number: 5 (lower is better)
Translates to: LCAHVPTTYKNIFLWEAGNMCEN*PTPTPI
Trigger: GATGGGGGTGGGCGTGGGCAAATTCTCACACATGTT...TCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp TTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAAGTCTCCTCCTGGGTTaGGTGGTAACTGCGACTCAG +
Preference number: 5 (lower is better)
Translates to: LCAHVPTTYKNIFLWEAGSLLLG*VVTATQ
Trigger: CTGAGTCGCAGTTACCACCAAACCCAGGAGGAGACT...TCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527636.7
CDS-3UTR CAA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTCAGTCTGATCCATGCTaGTTACCTTTAGCTTGGAAT +
Preference number: 5 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILQSDPC*LPLAWN
Trigger: ATTCCAAGCTAAAGGTAACAAGCATGGATCAGACTG...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334310.10
CDS-3UTR CAA 90 bp TCATTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTTCCTGGCTGCCCTGTTaGAATCATTCCCGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: SLCKPDKCALSFEWKRKSSWLPC*NHSRPE
Trigger: TTCTGGCCGGGAATGATTCAAACAGGGCAGCCAGGA...AGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTCCAGGCGAAGCTTGGTaGTGCCAATGGAGCGACCTT +
Preference number: 5 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFPGEAW*CQWSDL
Trigger: AAGGTCGCTCCATTGGCACAACCAAGCTTCGCCTGG...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp AGATTAGATGTTGTGATGCCAATCTCACCCAAAGGTCTAATCTGGGAGAGACAAGGCCATTCTCAAACCTaGCATACTCCGTCTCTACTT +
Preference number: 5 (lower is better)
Translates to: RLDVVMPISPKGLIWERQGHSQT*HTPSLL
Trigger: AAGTAGAGACGGAGTATGCAAGGTTTGAGAATGGCC...TTGTCTCTCCCAGATTAGACCTTTGGGTGAGATTGGCATCACAACATCTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGACCTTTCCCGAGGAATaGTGGGCTGCACATCTGAAG +
Preference number: 5 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTTFPEE*WAAHLK
Trigger: CTTCAGATGTGCAGCCCACAATTCCTCGGGAAAGGT...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAAACCTTTCCCGAGGAATaGTGGGCTGCACATCTGAAG +
Preference number: 5 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKTFPEE*WAAHLK
Trigger: CTTCAGATGTGCAGCCCACAATTCCTCGGGAAAGGT...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTCAAAAACATATTTCTTaGGGAAGCTGGAGGAGCACT +
Preference number: 5 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILQKHIS*GSWRST
Trigger: AGTGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTG...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATGCAGGGCCTTATCCTTaGCAGTCTGATCCTTTAGCT +
Preference number: 5 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDAGPYP*QSDPLA
Trigger: AGCTAAAGGATCAGACTGCAAAGGATAAGGCCCTGC...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGTCTGGTCTTCCCAATTaGGGAGAGGTCAGGCTTAGT +
Preference number: 5 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLESGLPN*GEVRLS
Trigger: ACTAAGCCTGACCTCTCCCAAATTGGGAAGACCAGA...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp AGATTAGATGTTGTGATGCCAATCTCACCCAAAGGTCTAATCTGGGAGAGACAACAAATGGGGACAGTTTaGCACTTTCTCCTCTGGTCT +
Preference number: 5 (lower is better)
Translates to: RLDVVMPISPKGLIWERQQMGTV*HFLLWS
Trigger: AGACCAGAGGAGAAAGTGCAAAACTGTCCCCATTTG...TTGTCTCTCCCAGATTAGACCTTTGGGTGAGATTGGCATCACAACATCTAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATTCAATGGTGTCAAGGTaGAGAAACCCTGGTCTCAGG +
Preference number: 5 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDSMVSR*RNPGLR
Trigger: CCTGAGACCAGGGTTTCTCAACCTTGACACCATTGA...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGTCAATGGTGTCAAGGTaGAGAAACCCTGGTCTCAGG +
Preference number: 5 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLESMVSR*RNPGLR
Trigger: CCTGAGACCAGGGTTTCTCAACCTTGACACCATTGA...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp GATGCAGGAAATAAGAGCAAAAGAAACATCCCTAAGAGGGGTGTTCAACAGAAGCACCCGATGGGATATTaGACAATATCTGGAGACACG +
Preference number: 5 (lower is better)
Translates to: DAGNKSKRNIPKRGVQQKHPMGY*TISGDT
Trigger: CGTGTCTCCAGATATTGTCAAATATCCCATCGGGTG...CTTCTGTTGAACACCCCTCTTAGGGATGTTTCTTTTGCTCTTATTTCCTGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp AGAACTGACTTGTGTCCAGTTTCGGATTTTACACCAAGCAGTCAGTTTCCTATATCTGAGTGCAGGACTTaGCTGCTAGGATGCTTACCA +
Preference number: 5 (lower is better)
Translates to: RTDLCPVSDFTPSSQFPISECRT*LLGCLP
Trigger: TGGTAAGCATCCTAGCAGCAAAGTCCTGCACTCAGA...TATAGGAAACTGACTGCTTGGTGTAAAATCCGAAACTGGACACAAGTCAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTAATGGGGGCTGTTTTTaGGCTGGTCTGAGTGCAGGA +
Preference number: 5 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSNGGCF*AGLSAG
Trigger: TCCTGCACTCAGACCAGCCAAAAAACAGCCCCCATT...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp AGAACTGACTTGTGTCCAGTTTCGGATTTTACACCAAGCAGTCAGTTTCCTATACCGAGATTCTGTCATTaGTGCAGAAGTCCCCTCATC +
Preference number: 5 (lower is better)
Translates to: RTDLCPVSDFTPSSQFPIPRFCH*CRSPLI
Trigger: GATGAGGGGACTTCTGCACAAATGACAGAATCTCGG...TATAGGAAACTGACTGCTTGGTGTAAAATCCGAAACTGGACACAAGTCAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp ACAAACACAACAGTTTCTGGGGTCCTTCCGCTGAAGTGTGCTATGGATGTTGGGCAATTTCTACAAGGTTaGGATAAAAGCCAACAAGGA +
Preference number: 5 (lower is better)
Translates to: TNTTVSGVLPLKCAMDVGQFLQG*DKSQQG
Trigger: TCCTTGTTGGCTTTTATCCAAACCTTGTAGAAATTG...CCCAACATCCATAGCACACTTCAGCGGAAGGACCCCAGAAACTGTTGTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS GCA 90 bp TGTTTCTGTGCTGAAAAGTTATCAAGACCAGCTCTCTGCTGCATTTaGATTGTTATTAGGAACACACACATACACACGCACACACACACG +
Preference number: 5 (lower is better)
Translates to: CFCAEKLSRPALCCI*IVIRNTHIHTHTHT
Trigger: CGTGTGTGTGTGCGTGTGTATGTGTGTGTTCCTAATAACAATGCAAATGCAGCAGAGAGCTGGTCTTGATAACTTTTCAGCACAGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525312.1
CDS-3UTR CAA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATCTGCTGGGCTCAATTTaGGCGGTGGGATTTTCCAAG +
Preference number: 5 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYLLGSI*AVGFSK
Trigger: CTTGGAAAATCCCACCGCCAAAATTGAGCCCAGCAG...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTTTTCTGGTCCTCGTCTaGCCTGTCCTGAGTTTGATG +
Preference number: 5 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSFLVLV*PVLSLM
Trigger: CATCAAACTCAGGACAGGCAAGACGAGGACCAGAAA...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGCCAAAGGAGCAAACTTaGGTGGAACAGGTGACTGTC +
Preference number: 5 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTPKEQT*VEQVTV
Trigger: GACAGTCACCTGTTCCACCAAAGTTTGCTCCTTTGG...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp AAAACATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTCAGATTCTGTATACTTaGCATCTCACAGTGCAGTAT +
Preference number: 5 (lower is better)
Translates to: KTSGHIKPTLPGQCSGILQILYT*HLTVQY
Trigger: ATACTGCACTGTGAGATGCAAAGTATACAGAATCTG...AAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGGCAGGGCCTTATCCTTaGCAGTCTGATCCTTTAGCT +
Preference number: 5 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTAGPYP*QSDPLA
Trigger: AGCTAAAGGATCAGACTGCAAAGGATAAGGCCCTGC...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGTGCACGAAGAGGTGTTaGTTGTACGAGTCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTCTKRC*LYESGS
Trigger: AGACCCAGACTCGTACAACAAACACCTCTTCGTGCA...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAAAATGTCACCTGCCTCTaGCAAGGCTCTAGGAGAGAT +
Preference number: 5 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKNVTCL*QGSRRD
Trigger: ATCTCTCCTAGAGCCTTGCAAGAGGCAGGTGACATT...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp CATCTGGCCACATCAAACCAACTCTGCCTGGGCAATGCTCTGGAATACTTAGATCAATTTCTACAAGGTTaGGATAAAAGCCAACAAGGA +
Preference number: 5 (lower is better)
Translates to: HLATSNQLCLGNALEYLDQFLQG*DKSQQG
Trigger: TCCTTGTTGGCTTTTATCCAAACCTTGTAGAAATTG...ATCTAAGTATTCCAGAGCATTGCCCAGGCAGAGTTGGTTTGATGTGGCCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGGCAGGGCCTTATCCTTaGCAGTCTGATCCATGCTTG +
Preference number: 5 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKAGPYP*QSDPCL
Trigger: CAAGCATGGATCAGACTGCAAAGGATAAGGCCCTGC...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334310.10
CDS-3UTR CAA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCTACTTTTTCTACTACTaGCTTCCCAAAGGAGCAAAC +
Preference number: 5 (lower is better)
Translates to: ALPVLSPVKHLREITQNIYFFYY*LPKGAN
Trigger: GTTTGCTCCTTTGGGAAGCAAGTAGTAGAAAAAGTA...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAAGGCCATTCTCAAACCTaGCATACTCCGTCTCTACTT +
Preference number: 5 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKGHSQT*HTPSLL
Trigger: AAGTAGAGACGGAGTATGCAAGGTTTGAGAATGGCC...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp AGATTAGATGTTGTGATGCCAATCTCACCCAAAGGTCTAATCTGGGAGAGACAATCATATATTCACACATaGGGGAGCGGTTTATTCGGT +
Preference number: 5 (lower is better)
Translates to: RLDVVMPISPKGLIWERQSYIHT*GSGLFG
Trigger: ACCGAATAAACCGCTCCCCAATGTGTGAATATATGA...TTGTCTCTCCCAGATTAGACCTTTGGGTGAGATTGGCATCACAACATCTAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp GCACTCCCTGTTCTCTCCCCAGTGAAACACTTAAGGGAAATAACTCAAAACATCCAGATTCTGTATACTTaGCATCTCACAGTGCAGTAT +
Preference number: 5 (lower is better)
Translates to: ALPVLSPVKHLREITQNIQILYT*HLTVQY
Trigger: ATACTGCACTGTGAGATGCAAAGTATACAGAATCTG...GATGTTTTGAGTTATTTCCCTTAAGTGTTTCACTGGGGAGAGAACAGGGAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATTCTGGTCTTCCCAATTaGGGAGAGGTCAGGCTTAGT +
Preference number: 5 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYSGLPN*GEVRLS
Trigger: ACTAAGCCTGACCTCTCCCAAATTGGGAAGACCAGA...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp TTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCACACCCGATGGGATATTaGACAATATCTGGAGACACG +
Preference number: 5 (lower is better)
Translates to: LCKPDKCALSFEWKRKSPHPMGY*TISGDT
Trigger: CGTGTCTCCAGATATTGTCAAATATCCCATCGGGTG...TGGAGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGCTTGGGCAACAGATCTaGACCAGGGATCATTTTGCA +
Preference number: 5 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTLGQQI*TRDHFA
Trigger: TGCAAAATGATCCCTGGTCAAGATCTGTTGCCCAAG...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGGTCGTTCGGGGACTTTaGACACCAAGTACTTGGAAT +
Preference number: 5 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTVVRGL*TPSTWN
Trigger: ATTCCAAGTACTTGGTGTCAAAAGTCCCCGAACGAC...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGGCCATGTGCAGGGCTTaGCCACAGAAACACCAACAT +
Preference number: 5 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKAMCRA*PQKHQH
Trigger: ATGTTGGTGTTTCTGTGGCAAAGCCCTGCACATGGC...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATAACAGAGGCCTGTGGTaGGTTACTCATCCCGGTAAA +
Preference number: 5 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYNRGLW*VTHPGK
Trigger: TTTACCGGGATGAGTAACCAACCACAGGCCTCTGTT...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp AGAACTGACTTGTGTCCAGTTTCGGATTTTACACCAAGCAGTCAGTTTCCTATAGACCCTAACTCACTTTaGTTTTGTTCTGCACTGTCG +
Preference number: 5 (lower is better)
Translates to: RTDLCPVSDFTPSSQFPIDPNSL*FCSALS
Trigger: CGACAGTGCAGAACAAAACAAAAGTGAGTTAGGGTC...TATAGGAAACTGACTGCTTGGTGTAAAATCCGAAACTGGACACAAGTCAGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATTGTGAATGGTGCTCTTaGGAAGTTTCTCGTAGCACA +
Preference number: 5 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDCEWCS*EVSRST
Trigger: TGTGCTACGAGAAACTTCCAAAGAGCACCATTCACA...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGCTGCATCATTGTCAATaGGCTTATCTGCAGAGTCAC +
Preference number: 5 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTLHHCQ*AYLQSH
Trigger: GTGACTCTGCAGATAAGCCAATTGACAATGATGCAG...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp TTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGACTGCATCATTGTCAATaGGCTTATCTGCAGAGTCAC +
Preference number: 5 (lower is better)
Translates to: LCAHVPTTYKNIFLWEAGLHHCQ*AYLQSH
Trigger: GTGACTCTGCAGATAAGCCAATTGACAATGATGCAG...TCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATGGCCATTCTCAAACCTaGCATACTCCGTCTCTACTT +
Preference number: 5 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYGHSQT*HTPSLL
Trigger: AAGTAGAGACGGAGTATGCAAGGTTTGAGAATGGCC...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp ATCTCTCCTGGCAAAAGAATCTCCCAAATGAGCCTATTTGAAAAGGTCAGAGATCAAAAACATATTTCTTaGGGAAGCTGGAGGAGCACT +
Preference number: 5 (lower is better)
Translates to: ISPGKRISQMSLFEKVRDQKHIS*GSWRST
Trigger: AGTGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTG...ATCTCTGACCTTTTCAAATAGGCTCATTTGGGAGATTCTTTTGCCAGGAGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp AAGTTGCAACCTTTTGTTTTGGTATATACATTTGAGTGTGGTGAAAGAACTGACTGCACGAAGAGGTGTTaGTTGTACGAGTCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: KLQPFVLVYTFECGERTDCTKRC*LYESGS
Trigger: AGACCCAGACTCGTACAACAAACACCTCTTCGTGCA...GTCAGTTCTTTCACCACACTCAAATGTATATACCAAAACAAAAGGTTGCAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp TTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGACACTGTCGTCTCAGTTaGAGGCTTCCAACTTTCAAA +
Preference number: 5 (lower is better)
Translates to: LCAHVPTTYKNIFLWEAGHCRLS*RLPTFK
Trigger: TTTGAAAGTTGGAAGCCTCAAACTGAGACGACAGTG...TCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGTTCCTACCATACATTTaGCCTTCGTCTGATAAGATG +
Preference number: 5 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLEFLPYI*PSSDKM
Trigger: CATCTTATCAGACGAAGGCAAAATGTATGGTAGGAA...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGTTGCCTGTCCTGAGTTaGATGTATCTGGCTATCAAT +
Preference number: 5 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTLPVLS*MYLAIN
Trigger: ATTGATAGCCAGATACATCAAACTCAGGACAGGCAA...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTTCATATATTCACACATaGGGGAGCGGTTTATTCGGT +
Preference number: 5 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSSYIHT*GSGLFG
Trigger: ACCGAATAAACCGCTCCCCAATGTGTGAATATATGA...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp TTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGACAAAAACATATTTCTTaGGGAAGCTGGAGGAGCACT +
Preference number: 5 (lower is better)
Translates to: LCAHVPTTYKNIFLWEAGQKHIS*GSWRST
Trigger: AGTGCTCCTCCAGCTTCCCAAAGAAATATGTTTTTG...TCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTTTACCAAATAGAAATTaGACTCAGAGCCTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSLPNRN*TQSLWL
Trigger: CAGCCACAGGCTCTGAGTCAAATTTCTATTTGGTAA...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAATTACCAAATAGAAATTaGACTCAGAGCCTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKLPNRN*TQSLWL
Trigger: CAGCCACAGGCTCTGAGTCAAATTTCTATTTGGTAA...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp GATGCAGGAAATAAGAGCAAAAGAAACATCCCTAAGAGGGGTGTTCAACAGAAGTTTGGCAGCTCTGAATaGAAAACTTCCTACAAAAGT +
Preference number: 5 (lower is better)
Translates to: DAGNKSKRNIPKRGVQQKFGSSE*KTSYKS
Trigger: ACTTTTGTAGGAAGTTTTCAATTCAGAGCTGCCAAA...CTTCTGTTGAACACCCCTCTTAGGGATGTTTCTTTTGCTCTTATTTCCTGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTGGTGAAAGAACTGACTaGTGTCCAGTTTCGGATTTT +
Preference number: 5 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSGERTD*CPVSDF
Trigger: AAAATCCGAAACTGGACACAAGTCAGTTCTTTCACC...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp ATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATACGAGTGCGCACTGTCATTaGAATGGAAAAGAAAGTCTC +
Preference number: 5 (lower is better)
Translates to: MDVLQEDVSKSTDTLRYTSAHCH*NGKESL
Trigger: GAGACTTTCTTTTCCATTCAAATGACAGTGCGCACT...CGTATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp TCATTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTGACCCTAACTCACTTTaGTTTTGTTCTGCACTGTCG +
Preference number: 5 (lower is better)
Translates to: SLCKPDKCALSFEWKRKSDPNSL*FCSALS
Trigger: CGACAGTGCAGAACAAAACAAAAGTGAGTTAGGGTC...AGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp CTCGTCTTCCTTACCTCTATCAGCTTTCCCAATTTCTACAAGGTTTGGATAAAATTCCTACCATACATTTaGCCTTCGTCTGATAAGATG +
Preference number: 5 (lower is better)
Translates to: LVFLTSISFPNFYKVWIKFLPYI*PSSDKM
Trigger: CATCTTATCAGACGAAGGCAAAATGTATGGTAGGAA...TTTTATCCAAACCTTGTAGAAATTGGGAAAGCTGATAGAGGTAAGGAAGACGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527636.7
CDS-3UTR CAA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTTACTTTTTCTACTACTaGCTTCCCAAAGGAGCAAAC +
Preference number: 5 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSYFFYY*LPKGAN
Trigger: GTTTGCTCCTTTGGGAAGCAAGTAGTAGAAAAAGTA...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp TTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCCACAGATTCTGTATACTTaGCATCTCACAGTGCAGTAT +
Preference number: 5 (lower is better)
Translates to: LCKPDKCALSFEWKRKSPQILYT*HLTVQY
Trigger: ATACTGCACTGTGAGATGCAAAGTATACAGAATCTG...TGGAGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCACTGTCGTCTCAGTTaGAGGCTTCCAACTTTCAAA +
Preference number: 5 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKHCRLS*RLPTFK
Trigger: TTTGAAAGTTGGAAGCCTCAAACTGAGACGACAGTG...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp AAGTTGCAACCTTTTGTTTTGGTATATACATTTGAGTGTGGTGAAAGAACTGACTGTGAATGGTGCTCTTaGGAAGTTTCTCGTAGCACA +
Preference number: 5 (lower is better)
Translates to: KLQPFVLVYTFECGERTDCEWCS*EVSRST
Trigger: TGTGCTACGAGAAACTTCCAAAGAGCACCATTCACA...GTCAGTTCTTTCACCACACTCAAATGTATATACCAAAACAAAAGGTTGCAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp TGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGAGCAGGAAAACAAGCATTaGACTAATTTCTTCCACACT +
Preference number: 5 (lower is better)
Translates to: CVHMFLPLTKTYFFGKLEQENKH*TNFFHT
Trigger: AGTGTGGAAGAAATTAGTCAAATGCTTGTTTTCCTG...CTCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATTTCCTACCATACATTTaGCCTTCGTCTGATAAGATG +
Preference number: 5 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYFLPYI*PSSDKM
Trigger: CATCTTATCAGACGAAGGCAAAATGTATGGTAGGAA...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTTTGCCTGTCCTGAGTTaGATGTATCTGGCTATCAAT +
Preference number: 5 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFLPVLS*MYLAIN
Trigger: ATTGATAGCCAGATACATCAAACTCAGGACAGGCAA...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334310.10
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATTACTTTTTCTACTACTaGCTTCCCAAAGGAGCAAAC +
Preference number: 5 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYYFFYY*LPKGAN
Trigger: GTTTGCTCCTTTGGGAAGCAAGTAGTAGAAAAAGTA...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTTCATATATTCACACATaGGGGAGCGGTTTATTCGGT +
Preference number: 5 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFSYIHT*GSGLFG
Trigger: ACCGAATAAACCGCTCCCCAATGTGTGAATATATGA...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGTCATATATTCACACATaGGGGAGCGGTTTATTCGGT +
Preference number: 5 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKSYIHT*GSGLFG
Trigger: ACCGAATAAACCGCTCCCCAATGTGTGAATATATGA...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp GAAATGGATGTGCTTCAAGAGGATGTATCTAAGTCTACAGACACATTGAGATATCAGTATTTTTGTGCTTaGGAAAGGAAATCCCAAGAG +
Preference number: 5 (lower is better)
Translates to: EMDVLQEDVSKSTDTLRYQYFCA*ERKSQE
Trigger: CTCTTGGGATTTCCTTTCCAAAGCACAAAAATACTG...ATATCTCAATGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp TCATTGTGTAAACCAGATAAGTGCGCACTGTCATTTGAATGGAAAAGAAAGTCTCAGTATTTTTGTGCTTaGGAAAGGAAATCCCAAGAG +
Preference number: 5 (lower is better)
Translates to: SLCKPDKCALSFEWKRKSQYFCA*ERKSQE
Trigger: CTCTTGGGATTTCCTTTCCAAAGCACAAAAATACTG...AGACTTTCTTTTCCATTCAAATGACAGTGCGCACTTATCTGGTTTACACAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp TTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCTGGATTTGGCAGCTCTGAATaGAAAACTTCCTACAAAAGT +
Preference number: 5 (lower is better)
Translates to: LCAHVPTTYKNIFLWEAGFGSSE*KTSYKS
Trigger: ACTTTTGTAGGAAGTTTTCAATTCAGAGCTGCCAAA...TCCAGCTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp AAGTCTACAGACACATTGAGATATACGTACATATCAGCACCTAGCAAACTGAGTCAGGAAAACAAGCATTaGACTAATTTCTTCCACACT +
Preference number: 5 (lower is better)
Translates to: KSTDTLRYTYISAPSKLSQENKH*TNFFHT
Trigger: AGTGTGGAAGAAATTAGTCAAATGCTTGTTTTCCTG...ACTCAGTTTGCTAGGTGCTGATATGTACGTATATCTCAATGTGTCTGTAGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS-3UTR CAA 90 bp TTCTATTGTGTGCACATGTTCCTACCACTTACAAAAACATATTTCTTTGGGAAGCAGATTCTGTATACTTaGCATCTCACAGTGCAGTAT +
Preference number: 5 (lower is better)
Translates to: FYCVHMFLPLTKTYFFGKQILYT*HLTVQY
Trigger: ATACTGCACTGTGAGATGCAAAGTATACAGAATCTG...CTTCCCAAAGAAATATGTTTTTGTAAGTGGTAGGAACATGTGCACACAATAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS-3UTR CAA 90 bp GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTATTTGATGAAATTTGGGCTGGAACATTCTTaGAAAATGCCAAATTGTGAA +
Preference number: 5 (lower is better)
Translates to: GAEMLKLMSLLLVYLMKFGLEHS*KMPNCE
Trigger: TTCACAATTTGGCATTTTCAAAGAATGTTCCAGCCC...AAATTTCATCAAATAGACAAGTAAAAGGCTCATCAGTTTTAGCATCTCTGCTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS GCA 72 bp TCCGAGGCAAACTTCGGCGCCGCTTCCCCCGCCCTCTaGTCGGTGCCCGGCTCCCTCCCCGGCTCCCGGTCC +
Preference number: 6 (lower is better)
Translates to: SEANFGAASPAL*SVPGSLPGSRS
Trigger: GGACCGGGAGCCGGGGAGGGAGCCGGGCACCGAGCAGAGGGCGGGGGAAGCGGCGCCGAAGTTTGCCTCGGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527376.3
ENST00000527636.7
CDS GCA 72 bp CACTCATCCTTTCCATGTTTTCGGCAGGGCTCTCACTaGCGCTCCAGCTGCTGGGCTCAATTTTGGCGGTGG +
Preference number: 6 (lower is better)
Translates to: HSSFPCFRQGSH*RSSCWAQFWRW
Trigger: CCACCGCCAAAATTGAGCCCAGCAGCTGGAGCGGCAGTGAGAGCCCTGCCGAAAACATGGAAAGGATGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000527376.3
ENST00000527575.6
ENST00000527636.7
CDS CCA 72 bp CTGAAAATTCCACCAGGCGAAGCTTGGTTGTGCCAATaGAGCGACCTTGCCAGGCAGGGACTGAGGGAGCTG +
Preference number: 6 (lower is better)
Translates to: LKIPPGEAWLCQ*SDLARQGLREL
Trigger: CAGCTCCCTCAGTCCCTGCCTGGCAAGGTCGCTCCATTGGCACAACCAAGCTTCGCCTGGTGGAATTTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS CAA 90 bp TCTCGCTGCTGCTCGAGAAAAGCTGAAAATTCCACCAGGCGAAGCTaGGTTGTGCCAATGGAGCGACCTTGCCAGGCAGGGACTGAGGGA +
Preference number: 6 (lower is better)
Translates to: SRCCSRKAENSTRRS*VVPMERPCQAGTEG
Trigger: TCCCTCAGTCCCTGCCTGGCAAGGTCGCTCCATTGGCACAACCAAGCTTCGCCTGGTGGAATTTTCAGCTTTTCTCGAGCAGCAGCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS CCA 72 bp GCTCGAGAAAAGCTGAAAATTCCACCAGGCGAAGCTTaGTTGTGCCAATGGAGCGACCTTGCCAGGCAGGGA +
Preference number: 6 (lower is better)
Translates to: AREKLKIPPGEA*LCQWSDLARQG
Trigger: TCCCTGCCTGGCAAGGTCGCTCCATTGGCACAACCAAGCTTCGCCTGGTGGAATTTTCAGCTTTTCTCGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS CAA 72 bp CGAGAAAAGCTGAAAATTCCACCAGGCGAAGCTTGGTaGTGCCAATGGAGCGACCTTGCCAGGCAGGGACTG +
Preference number: 6 (lower is better)
Translates to: REKLKIPPGEAW*CQWSDLARQGL
Trigger: CAGTCCCTGCCTGGCAAGGTCGCTCCATTGGCACAACCAAGCTTCGCCTGGTGGAATTTTCAGCTTTTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS CAA 72 bp TGCTCGAGAAAAGCTGAAAATTCCACCAGGCGAAGCTaGGTTGTGCCAATGGAGCGACCTTGCCAGGCAGGG +
Preference number: 6 (lower is better)
Translates to: CSRKAENSTRRS*VVPMERPCQAG
Trigger: CCCTGCCTGGCAAGGTCGCTCCATTGGCACAACCAAGCTTCGCCTGGTGGAATTTTCAGCTTTTCTCGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000526600.1
ENST00000527575.6
ENST00000527636.7
CDS TCA 72 bp AGCCGAGTCTGGGTCTCGCTGCTGCTCGAGAAAAGCTaGAAATTCCACCAGGCGAAGCTTGGTTGTGCCAAT +
Preference number: 6 (lower is better)
Translates to: SRVWVSLLLEKS*KFHQAKLGCAN
Trigger: ATTGGCACAACCAAGCTTCGCCTGGTGGAATTTTCAGCTTTTCTCGAGCAGCAGCGAGACCCAGACTCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334310.10
ENST00000527575.6
CDS TCA 72 bp GTACGAGTCTGGGTCTCGCTGCTGCTCGAGAAAAGCTaGAAATTCCACCAGGCGAAGCTTGGTTGTGCCAAT +
Preference number: 6 (lower is better)
Translates to: VRVWVSLLLEKS*KFHQAKLGCAN
Trigger: ATTGGCACAACCAAGCTTCGCCTGGTGGAATTTTCAGCTTTTCTCGAGCAGCAGCGAGACCCAGACTCGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS GCA 72 bp TTGCAGTTTAAATCAGCCGAGTCTGGGTCTCGCTGCTaGTCGAGAAAAGCTGAAAATTCCACCAGGCGAAGC +
Preference number: 6 (lower is better)
Translates to: LQFKSAESGSRC*SRKAENSTRRS
Trigger: GCTTCGCCTGGTGGAATTTTCAGCTTTTCTCGAGCAGCAGCGAGACCCAGACTCGGCTGATTTAAACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334310.10
ENST00000527575.6
CDS GCA 72 bp AAGAGGTGTTTGTTGTACGAGTCTGGGTCTCGCTGCTaGTCGAGAAAAGCTGAAAATTCCACCAGGCGAAGC +
Preference number: 6 (lower is better)
Translates to: KRCLLYESGSRC*SRKAENSTRRS
Trigger: GCTTCGCCTGGTGGAATTTTCAGCTTTTCTCGAGCAGCAGCGAGACCCAGACTCGTACAACAAACACCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS GCA 72 bp ACGAAGAGGTGTTTGTTGTACGAGTCTGGGTCTCGCTaGTGCTCGAGAAAAGCTGAAAATTCCACCAGGCGA +
Preference number: 6 (lower is better)
Translates to: TKRCLLYESGSR*CSRKAENSTRR
Trigger: TCGCCTGGTGGAATTTTCAGCTTTTCTCGAGCAGCAGCGAGACCCAGACTCGTACAACAAACACCTCTTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526600.1
ENST00000527636.7
CDS CCA 72 bp ACGAGAATCCCAGCACCAGGCATTCACCAGTCACCATaGAAAACAGGAAGTGAGATGCATAGCAACCACAAG +
Preference number: 6 (lower is better)
Translates to: TRIPAPGIHQSP*KTGSEMHSNHK
Trigger: CTTGTGGTTGCTATGCATCTCACTTCCTGTTTTCCATGGTGACTGGTGAATGCCTGGTGCTGGGATTCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525312.1
CDS GCA 72 bp CCAGACCCCTTCTGCATCATTGTCAATTGGCTTATCTaGAGAGTCACTCATCCTTTCCATGTTTTCGGCAGG +
Preference number: 6 (lower is better)
Translates to: PDPFCIIVNWLI*RVTHPFHVFGR
Trigger: CCTGCCGAAAACATGGAAAGGATGAGTGACTCTGCAGATAAGCCAATTGACAATGATGCAGAAGGGGTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334310.10
ENST00000527376.3
ENST00000527575.6
ENST00000527636.7
CDS GCA 72 bp ATATTGCAGTTTAAATCAGCCGAGTCTGGGTCTCGCTaGTGCTCGAGAAAAGCTGAAAATTCCACCAGGCGA +
Preference number: 6 (lower is better)
Translates to: ILQFKSAESGSR*CSRKAENSTRR
Trigger: TCGCCTGGTGGAATTTTCAGCTTTTCTCGAGCAGCAGCGAGACCCAGACTCGGCTGATTTAAACTGCAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334310.10
ENST00000527575.6
CDS CCA 72 bp TACCAGGCAGGTTACACAGGCACAGCCACGAGCACATaGACTAAAATACAGAGCCACAAAATAGGCCAAAAA +
Preference number: 6 (lower is better)
Translates to: YQAGYTGTATST*TKIQSHKIGQK
Trigger: TTTTTGGCCTATTTTGTGGCTCTGTATTTTAGTCCATGTGCTCGTGGCTGTGCCTGTGTAACCTGCCTGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526600.1
CDS TCA 72 bp ACAAGTGGGCAAGCCAGACGTACCTTAATGGCGGCTTaGATTTCTCGAACTTTCTTTCTTGCTAAGACCTGT +
Preference number: 6 (lower is better)
Translates to: TSGQARRTLMAA*ISRTFFLAKTC
Trigger: ACAGGTCTTAGCAAGAAAGAAAGTTCGAGAAATTCAAGCCGCCATTAAGGTACGTCTGGCTTGCCCACTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525312.1
CDS GCA 72 bp TTACACCATAAAAAGCCCCAGCATCATCTTGAATATTaGAGTTTAAATCAGCCGAGTCTGGGTCTCGCTGCT +
Preference number: 6 (lower is better)
Translates to: LHHKKPQHHLEY*SLNQPSLGLAA
Trigger: AGCAGCGAGACCCAGACTCGGCTGATTTAAACTGCAATATTCAAGATGATGCTGGGGCTTTTTATGGTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334310.10
ENST00000527575.6
CDS CAA 90 bp TCTGTGCTGAAAAGTTATCAAGACCAGCTCTCTGCTGCATTTGCATaGTTATTAGGAACACACACATACACACGCACACACACACGCAAA +
Preference number: 6 (lower is better)
Translates to: SVLKSYQDQLSAAFA*LLGTHTYTRTHTRK
Trigger: TTTGCGTGTGTGTGTGCGTGTGTATGTGTGTGTTCCTAATAACAATGCAAATGCAGCAGAGAGCTGGTCTTGATAACTTTTCAGCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525312.1