Pregenerated sensors for TDRG1 (Homo sapiens)
Ensembl gene IDs: ENSG00000204091Ensembl transcript IDs: ENST00000373170.2, ENST00000448433.6, ENST00000448559.5, ENST00000451810.3, ENST00000652779.1, ENST00000653048.1, ENST00000654292.1, ENST00000655318.1, ENST00000660693.1, ENST00000660989.1, ENST00000664585.1, ENST00000665433.1, ENST00000665631.1, ENST00000670828.1, ENST00000671430.1
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCACGGAAAGAGTCAGGCCTGGGAGGGGCCGGACCGGGGCACAAATaGTGGAGGTTTCAGAGATGGGCTGGCGCTGGCGAAGGCAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: SRKESGLGGAGPGHK*WRFQRWAGAGEGRS Trigger: AGACCTGCCTTCGCCAGCGCCAGCCCATCTCTGAAACCTCCAGCATTTGTGCCCCGGTCCGGCCCCTCCCAGGCCTGACTCTTTCCGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000652779.1 ENST00000653048.1 ENST00000655318.1 ENST00000664585.1 ENST00000665631.1 ENST00000670828.1 ENST00000671430.1 |
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| CDS GCA 90 bp | GTTCGGAAAGAGTCAGGCCTGGGAGGGGCCGGACCGGGGCACAAATaGTGGAGGTTTCAGAGATGGGCTGGCGCTGGCGAAGGCAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: VRKESGLGGAGPGHK*WRFQRWAGAGEGRS Trigger: AGACCTGCCTTCGCCAGCGCCAGCCCATCTCTGAAACCTCCAGCATTTGTGCCCCGGTCCGGCCCCTCCCAGGCCTGACTCTTTCCGAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654292.1 ENST00000660693.1 |
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| CDS GCA 90 bp | ACACGGAAAGAGTCAGGCCTGGGAGGGGCCGGACCGGGGCACAAATaGTGGAGGTTTCAGAGATGGGCTGGCGCTGGCGAAGGCAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: TRKESGLGGAGPGHK*WRFQRWAGAGEGRS Trigger: AGACCTGCCTTCGCCAGCGCCAGCCCATCTCTGAAACCTCCAGCATTTGTGCCCCGGTCCGGCCCCTCCCAGGCCTGACTCTTTCCGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665433.1 |
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| CDS CCA 90 bp | GCTGGCGCTGGCGAAGGCAGGTCTGCCAGTGACGTATTTGTCCTGTaGGTCCTGGGCTCTTTCGTGGCACGCAGGGCACTCTCCTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: AGAGEGRSASDVFVL*VLGSFVARRALSFL Trigger: CAGGAAGGAGAGTGCCCTGCGTGCCACGAAAGAGCCCAGGACCCACAGGACAAATACGTCACTGGCAGACCTGCCTTCGCCAGCGCCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000652779.1 ENST00000654292.1 ENST00000655318.1 ENST00000660693.1 ENST00000664585.1 ENST00000665433.1 ENST00000665631.1 ENST00000670828.1 ENST00000671430.1 |
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| CDS CCA 90 bp | CTGGGAGGGGCCGGACCGGGGCACAAATGCTGGAGGTTTCAGAGATaGGCTGGCGCTGGCGAAGGCAGGTCTGCCAGTGACGTATTTGTC | + |
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Preference number: 5 (lower is better) Translates to: LGGAGPGHKCWRFQR*AGAGEGRSASDVFV Trigger: GACAAATACGTCACTGGCAGACCTGCCTTCGCCAGCGCCAGCCCATCTCTGAAACCTCCAGCATTTGTGCCCCGGTCCGGCCCCTCCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000652779.1 ENST00000653048.1 ENST00000654292.1 ENST00000655318.1 ENST00000660693.1 ENST00000664585.1 ENST00000665433.1 ENST00000665631.1 ENST00000670828.1 ENST00000671430.1 |
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| CDS CCA 90 bp | CTGGCGAAGGCAGGTCTGCCAGTGACGTATTTGTCCTGTGGGTCCTaGGCTCTTTCGTGGCACGCAGGGCACTCTCCTTCCTGGGATGGG | + |
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Preference number: 5 (lower is better) Translates to: LAKAGLPVTYLSCGS*ALSWHAGHSPSWDG Trigger: CCCATCCCAGGAAGGAGAGTGCCCTGCGTGCCACGAAAGAGCCCAGGACCCACAGGACAAATACGTCACTGGCAGACCTGCCTTCGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000652779.1 ENST00000654292.1 ENST00000655318.1 ENST00000660693.1 ENST00000664585.1 ENST00000665433.1 ENST00000665631.1 ENST00000670828.1 ENST00000671430.1 |
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| CDS CCA 90 bp | GCTGGCGCTGGCGAAGGCAGGTCTGCCAGTGACGTATTTGTCCTGTaGGTCCTGGGCTCTTTCGTGGCACGCAGGGCACTCTCCTTCCTA | + |
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Preference number: 5 (lower is better) Translates to: AGAGEGRSASDVFVL*VLGSFVARRALSFL Trigger: TAGGAAGGAGAGTGCCCTGCGTGCCACGAAAGAGCCCAGGACCCACAGGACAAATACGTCACTGGCAGACCTGCCTTCGCCAGCGCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653048.1 |
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| CDS TCA 90 bp | AAATGGCGGTGCGCGCAGACTGCCTCCCTCCTCTTCATTGTAGCTTaGTCCTGCGCAGTGACCGTTCGGAAAGAGTCAGGCCTGGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: KWRCAQTASLLFIVA*SCAVTVRKESGLGG Trigger: CCCTCCCAGGCCTGACTCTTTCCGAACGGTCACTGCGCAGGATCAAGCTACAATGAAGAGGAGGGAGGCAGTCTGCGCGCACCGCCATTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654292.1 ENST00000660693.1 |
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| CDS GCA 90 bp | TACGGAGGTGAAGAAGAGCAGAATGGGCGAGTACCAGACTGCAGCTaGAGCCAAGCCAGGGAAGAGGCTAAAGAGGGTCCTCGGCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: YGGEEEQNGRVPDCS*SQAREEAKEGPRRL Trigger: GAGCCGCCGAGGACCCTCTTTAGCCTCTTCCCTGGCTTGGCTGCAGCTGCAGTCTGGTACTCGCCCATTCTGCTCTTCTTCACCTCCGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000373170.2 ENST00000654292.1 ENST00000664585.1 ENST00000665433.1 ENST00000671430.1 |
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| CDS CCA 90 bp | ACACCTAGGCGAGGACGGGCAGCAGCGGCCCTGGGAAGGCTTCCGTaGAAACTTCCAAAACCACCTTGCCAGGTAAGTGAAAGTGCGCTC | + |
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Preference number: 5 (lower is better) Translates to: TPRRGRAAAALGRLP*KLPKPPCQVSESAL Trigger: GAGCGCACTTTCACTTACCTGGCAAGGTGGTTTTGGAAGTTTCCACGGAAGCCTTCCCAGGGCCGCTGCTGCCCGTCCTCGCCTAGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000373170.2 ENST00000654292.1 ENST00000664585.1 ENST00000665433.1 ENST00000671430.1 |
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| CDS CCA 90 bp | CTTCCTAGGCGAGGACGGGCAGCAGCGGCCCTGGGAAGGCTTCCGTaGAAACTTCCAAAACCACCTTGCCAGGTAAGTGAAAGTGCGCTC | + |
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Preference number: 5 (lower is better) Translates to: LPRRGRAAAALGRLP*KLPKPPCQVSESAL Trigger: GAGCGCACTTTCACTTACCTGGCAAGGTGGTTTTGGAAGTTTCCACGGAAGCCTTCCCAGGGCCGCTGCTGCCCGTCCTCGCCTAGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653048.1 |
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| CDS TCA 90 bp | AAATGGCGGTGCGCGCAGACTGCCTCCCTCCTCTTCATTGTAGCTTaGTCCTGCGCAGTGACCGTTCACGGAAAGAGTCAGGCCTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: KWRCAQTASLLFIVA*SCAVTVHGKSQAWE Trigger: CTCCCAGGCCTGACTCTTTCCGTGAACGGTCACTGCGCAGGATCAAGCTACAATGAAGAGGAGGGAGGCAGTCTGCGCGCACCGCCATTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000652779.1 ENST00000653048.1 ENST00000655318.1 ENST00000664585.1 ENST00000665631.1 ENST00000670828.1 ENST00000671430.1 |
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| CDS CCA 90 bp | TCTTCTAGGCGAGGACGGGCAGCAGCGGCCCTGGGAAGGCTTCCGTaGAAACTTCCAAAACCACCTTGCCAGGTAAGTGAAAGTGCGCTC | + |
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Preference number: 5 (lower is better) Translates to: SSRRGRAAAALGRLP*KLPKPPCQVSESAL Trigger: GAGCGCACTTTCACTTACCTGGCAAGGTGGTTTTGGAAGTTTCCACGGAAGCCTTCCCAGGGCCGCTGCTGCCCGTCCTCGCCTAGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448433.6 ENST00000655318.1 |
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| CDS TCA 90 bp | AAATGGCGGTGCGCGCAGACTGCCTCCCTCCTCTTCATTGTAGCTTaGTCCTGCGCAGTGACCGTTCCAGCTGTTGGAGAGCAGGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: KWRCAQTASLLFIVA*SCAVTVPAVGEQVK Trigger: CTTCACCTGCTCTCCAACAGCTGGAACGGTCACTGCGCAGGATCAAGCTACAATGAAGAGGAGGGAGGCAGTCTGCGCGCACCGCCATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448559.5 |
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| CDS CCA 90 bp | GGTCTGCCAGTGACGTATTTGTCCTGTGGGTCCTGGGCTCTTTCGTaGCACGCAGGGCACTCTCCTTCCTGGGATGGGAGAATGGAATTC | + |
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Preference number: 5 (lower is better) Translates to: GLPVTYLSCGSWALS*HAGHSPSWDGRMEF Trigger: GAATTCCATTCTCCCATCCCAGGAAGGAGAGTGCCCTGCGTGCCACGAAAGAGCCCAGGACCCACAGGACAAATACGTCACTGGCAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000652779.1 ENST00000654292.1 ENST00000655318.1 ENST00000660693.1 ENST00000664585.1 ENST00000665433.1 ENST00000665631.1 ENST00000670828.1 ENST00000671430.1 |
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| CDS CCA 90 bp | AATTCTAGGCGAGGACGGGCAGCAGCGGCCCTGGGAAGGCTTCCGTaGAAACTTCCAAAACCACCTTGCCAGGTAAGTGAAAGTGCGCTC | + |
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Preference number: 5 (lower is better) Translates to: NSRRGRAAAALGRLP*KLPKPPCQVSESAL Trigger: GAGCGCACTTTCACTTACCTGGCAAGGTGGTTTTGGAAGTTTCCACGGAAGCCTTCCCAGGGCCGCTGCTGCCCGTCCTCGCCTAGAATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652779.1 |
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| CDS GCA 90 bp | AGAAAATACGGAGGTGAAGAAGAGCAGAATGGGCGAGTACCAGACTaGAGCTGCAGCCAAGCCAGGGAAGAGGCTAAAGAGGGTCCTCGG | + |
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Preference number: 5 (lower is better) Translates to: RKYGGEEEQNGRVPD*SCSQAREEAKEGPR Trigger: CCGAGGACCCTCTTTAGCCTCTTCCCTGGCTTGGCTGCAGCTGCAGTCTGGTACTCGCCCATTCTGCTCTTCTTCACCTCCGTATTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000373170.2 ENST00000654292.1 ENST00000664585.1 ENST00000665433.1 ENST00000671430.1 |
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| CDS TCA 90 bp | GTTCTGAGGTATGTGGGACTAGCCTGGCTGGCTGACCAGGCTTCTTaGGCCCCACAGGCCTCTTTCACAGAAAGGGAGTTTGGATCAACA | + |
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Preference number: 5 (lower is better) Translates to: VLRYVGLAWLADQAS*APQASFTEREFGST Trigger: TGTTGATCCAAACTCCCTTTCTGTGAAAGAGGCCTGTGGGGCTCAAGAAGCCTGGTCAGCCAGCCAGGCTAGTCCCACATACCTCAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000448559.5 ENST00000451810.3 ENST00000652779.1 ENST00000653048.1 ENST00000654292.1 ENST00000655318.1 ENST00000660693.1 ENST00000660989.1 ENST00000665433.1 ENST00000665631.1 ENST00000670828.1 ENST00000671430.1 |
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| CDS CCA 90 bp | TGTGGGTCCTGGGCTCTTTCGTGGCACGCAGGGCACTCTCCTTCCTaGGATGGGAGAATGGAATTCTTCTTCCGTGAGAGAGAAAATACG | + |
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Preference number: 5 (lower is better) Translates to: CGSWALSWHAGHSPS*DGRMEFFFRERENT Trigger: CGTATTTTCTCTCTCACGGAAGAAGAATTCCATTCTCCCATCCCAGGAAGGAGAGTGCCCTGCGTGCCACGAAAGAGCCCAGGACCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000373170.2 ENST00000654292.1 ENST00000664585.1 ENST00000665433.1 ENST00000671430.1 |
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| CDS GCA 90 bp | TGCGCAGTGACCGTTCCTACGATGTCACTGCACATGAAAATGACCTaGATCCTCCCTCCTGTGGGTACCGGCAGATGGTCTTTTGGTTTC | + |
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Preference number: 5 (lower is better) Translates to: CAVTVPTMSLHMKMT*ILPPVGTGRWSFGF Trigger: GAAACCAAAAGACCATCTGCCGGTACCCACAGGAGGGAGGATGCAGGTCATTTTCATGTGCAGTGACATCGTAGGAACGGTCACTGCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000451810.3 ENST00000660989.1 |
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| CDS TCA 90 bp | GGGAAGGCTTCCGTGGAAACTTCCAAAACCACCTTGCCAGGTAAGTaGAAGTGCGCTCCGTTCTCTAGCCACATCCTAGGCCAAGTAAGT | + |
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Preference number: 5 (lower is better) Translates to: GKASVETSKTTLPGK*KCAPFSSHILGQVS Trigger: ACTTACTTGGCCTAGGATGTGGCTAGAGAACGGAGCGCACTTTCACTTACCTGGCAAGGTGGTTTTGGAAGTTTCCACGGAAGCCTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000652779.1 ENST00000653048.1 ENST00000654292.1 ENST00000655318.1 ENST00000664585.1 ENST00000665433.1 ENST00000671430.1 |
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| CDS CCA 90 bp | TGTTCTCAGTGTGCCTGCAGTGAAGGTCTCAGGGCTTCAGCAAGCTaGGTGGGGCTTTCTCTGTTCTTACAACCAGTGGGATTTCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: CSQCACSEGLRASAS*VGLSLFLQPVGFLQ Trigger: TTGCAGAAATCCCACTGGTTGTAAGAACAGAGAAAGCCCCACCCAGCTTGCTGAAGCCCTGAGACCTTCACTGCAGGCACACTGAGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664585.1 |
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| CDS TCA 90 bp | TCCAACTCACAGCTAGCCCTCTGTACTAAGGAACCAGACGAATCTTaGCCTCCCAGGGAACCTAGACCTGGGAAGGCTGAACTTGCTATT | + |
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Preference number: 5 (lower is better) Translates to: SNSQLALCTKEPDES*PPREPRPGKAELAI Trigger: AATAGCAAGTTCAGCCTTCCCAGGTCTAGGTTCCCTGGGAGGTCAAGATTCGTCTGGTTCCTTAGTACAGAGGGCTAGCTGTGAGTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000448559.5 ENST00000451810.3 ENST00000652779.1 ENST00000653048.1 ENST00000654292.1 ENST00000655318.1 ENST00000660693.1 ENST00000660989.1 ENST00000665433.1 ENST00000665631.1 ENST00000670828.1 ENST00000671430.1 |
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| CDS GCA 90 bp | CAGCTGAATATGCTCCTGGAGCCAGAATTCTCCTCCACTATCTCATaGCGGAGTCTGTCTGGGATTGGAGCAAGGAAGATCTCATGGTCT | + |
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Preference number: 5 (lower is better) Translates to: QLNMLLEPEFSSTIS*RSLSGIGARKISWS Trigger: AGACCATGAGATCTTCCTTGCTCCAATCCCAGACAGACTCCGGCATGAGATAGTGGAGGAGAATTCTGGCTCCAGGAGCATATTCAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664585.1 |
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| CDS CCA 90 bp | AAAACCAGAACAGTTCAACAAGGAACTGCAGCGGCAGATAGTGTTTaGGAGGTGCCAGGTGGGATACAGGAGAAAGGCATGGAGAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: KTRTVQQGTAAADSV*EVPGGIQEKGMEKE Trigger: CTCCTTCTCCATGCCTTTCTCCTGTATCCCACCTGGCACCTCCCAAACACTATCTGCCGCTGCAGTTCCTTGTTGAACTGTTCTGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451810.3 |
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| CDS TCA 90 bp | CCTGTCAAGAAGGAAGGCAGGCTACGGGTATCTTCCAGGAACAGATaGAGGTTGCGAAATAACTGCCAACTGTCTTCTGCTCTGGCAGTT | + |
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Preference number: 5 (lower is better) Translates to: PVKKEGRLRVSSRNR*RLRNNCQLSSALAV Trigger: AACTGCCAGAGCAGAAGACAGTTGGCAGTTATTTCGCAACCTTCATCTGTTCCTGGAAGATACCCGTAGCCTGCCTTCCTTCTTGACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000448433.6 ENST00000652779.1 ENST00000653048.1 ENST00000665631.1 ENST00000671430.1 |
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| CDS CCA 90 bp | ATCTCATGCCGGAGTCTGTCTGGGATTGGAGCAAGGAAGATCTCATaGTCTAGTCCTTTCCAAGATGTCAACAGTCACATGCTCGGTTTC | + |
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Preference number: 5 (lower is better) Translates to: ISCRSLSGIGARKIS*SSPFQDVNSHMLGF Trigger: GAAACCGAGCATGTGACTGTTGACATCTTGGAAAGGACTAGACCATGAGATCTTCCTTGCTCCAATCCCAGACAGACTCCGGCATGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664585.1 |
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| CDS TCA 90 bp | CACATCCTAGGCCAAGTAAGTTCTTCTTCATTCTTTCAGCAGTCCTaGTCTTCTTGGGGAGCACCCCTAAATCAGCTCAGTCAGCTCCTA | + |
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Preference number: 5 (lower is better) Translates to: HILGQVSSSSFFQQS*SSWGAPLNQLSQLL Trigger: TAGGAGCTGACTGAGCTGATTTAGGGGTGCTCCCCAAGAAGATCAGGACTGCTGAAAGAATGAAGAAGAACTTACTTGGCCTAGGATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655318.1 |
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| CDS GCA 90 bp | ACCAGATCCCTGAAGACTGCACCGTTCTCTGTGTATAGAGCAAGCTaGTGGTTAGAGGATCTGAAGCTACTTAATGCACTTGCGCTGTTT | + |
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Preference number: 5 (lower is better) Translates to: TRSLKTAPFSVYRAS*WLEDLKLLNALALF Trigger: AAACAGCGCAAGTGCATTAAGTAGCTTCAGATCCTCTAACCAGCAGCTTGCTCTATACACAGAGAACGGTGCAGTCTTCAGGGATCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660989.1 |
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| CDS CCA 90 bp | AGATCCCTGAAGACTGCACCGTTCTCTGTGTATAGAGCAAGCTGCTaGTTAGAGGATCTGAAGCTACTTAATGCACTTGCGCTGTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: RSLKTAPFSVYRASC*LEDLKLLNALALFA Trigger: TGCAAACAGCGCAAGTGCATTAAGTAGCTTCAGATCCTCTAACCAGCAGCTTGCTCTATACACAGAGAACGGTGCAGTCTTCAGGGATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660989.1 |
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| CDS TCA 90 bp | CACATCCTAGGCCAAGTAAGTTCTTCTTCATTCTTTCAGCAGTCCTaGTCTTCTTGGGGAGCACCCCTAAATCAGCCTGTCAAGAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: HILGQVSSSSFFQQS*SSWGAPLNQPVKKE Trigger: TTCCTTCTTGACAGGCTGATTTAGGGGTGCTCCCCAAGAAGATCAGGACTGCTGAAAGAATGAAGAAGAACTTACTTGGCCTAGGATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000652779.1 ENST00000653048.1 ENST00000654292.1 ENST00000660693.1 ENST00000664585.1 ENST00000665433.1 ENST00000665631.1 ENST00000670828.1 ENST00000671430.1 |
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| CDS TCA 90 bp | ATTATTGTTGGGATAATTGATCTTCTGGTCCCTTTAGCCATCAGCTaGATATGCTCCTGGAGCCAGAATTCTCCTCCACTATCTCATGCC | + |
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Preference number: 5 (lower is better) Translates to: IIVGIIDLLVPLAIS*ICSWSQNSPPLSHA Trigger: GGCATGAGATAGTGGAGGAGAATTCTGGCTCCAGGAGCATATTCAGCTGATGGCTAAAGGGACCAGAAGATCAATTATCCCAACAATAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664585.1 |
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| CDS CCA 72 bp | TCAGGCCTGGGAGGGGCCGGACCGGGGCACAAATGCTaGAGGTTTCAGAGATGGGCTGGCGCTGGCGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: SGLGGAGPGHKC*RFQRWAGAGEG Trigger: GCCTTCGCCAGCGCCAGCCCATCTCTGAAACCTCCAGCATTTGTGCCCCGGTCCGGCCCCTCCCAGGCCTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000652779.1 ENST00000653048.1 ENST00000654292.1 ENST00000655318.1 ENST00000660693.1 ENST00000664585.1 ENST00000665433.1 ENST00000665631.1 ENST00000670828.1 ENST00000671430.1 |
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| CDS GCA 72 bp | GAGTCAGGCCTGGGAGGGGCCGGACCGGGGCACAAATaGTGGAGGTTTCAGAGATGGGCTGGCGCTGGCGAA | + |
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Preference number: 6 (lower is better) Translates to: ESGLGGAGPGHK*WRFQRWAGAGE Trigger: TTCGCCAGCGCCAGCCCATCTCTGAAACCTCCAGCATTTGTGCCCCGGTCCGGCCCCTCCCAGGCCTGACTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000652779.1 ENST00000653048.1 ENST00000654292.1 ENST00000655318.1 ENST00000660693.1 ENST00000664585.1 ENST00000665433.1 ENST00000665631.1 ENST00000670828.1 ENST00000671430.1 |
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| CDS CCA 72 bp | GCTCCACACCTAGGCGAGGACGGGCAGCAGCGGCCCTaGGAAGGCTTCCGTGGAAACTTCCAAAACCACCTT | + |
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Preference number: 6 (lower is better) Translates to: APHLGEDGQQRP*EGFRGNFQNHL Trigger: AAGGTGGTTTTGGAAGTTTCCACGGAAGCCTTCCCAGGGCCGCTGCTGCCCGTCCTCGCCTAGGTGTGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000373170.2 ENST00000654292.1 ENST00000664585.1 ENST00000665433.1 ENST00000671430.1 |
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| CDS CCA 72 bp | GGCGAAGGCAGGTCTGCCAGTGACGTATTTGTCCTGTaGGTCCTGGGCTCTTTCGTGGCACGCAGGGCACTC | + |
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Preference number: 6 (lower is better) Translates to: GEGRSASDVFVL*VLGSFVARRAL Trigger: GAGTGCCCTGCGTGCCACGAAAGAGCCCAGGACCCACAGGACAAATACGTCACTGGCAGACCTGCCTTCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000652779.1 ENST00000653048.1 ENST00000654292.1 ENST00000655318.1 ENST00000660693.1 ENST00000664585.1 ENST00000665433.1 ENST00000665631.1 ENST00000670828.1 ENST00000671430.1 |
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| CDS CAA 72 bp | CTGGCGCTGGCGAAGGCAGGTCTGCCAGTGACGTATTaGTCCTGTGGGTCCTGGGCTCTTTCGTGGCACGCA | + |
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Preference number: 6 (lower is better) Translates to: LALAKAGLPVTY*SCGSWALSWHA Trigger: TGCGTGCCACGAAAGAGCCCAGGACCCACAGGACAAATACGTCACTGGCAGACCTGCCTTCGCCAGCGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000652779.1 ENST00000653048.1 ENST00000654292.1 ENST00000655318.1 ENST00000660693.1 ENST00000664585.1 ENST00000665433.1 ENST00000665631.1 ENST00000670828.1 ENST00000671430.1 |
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| CDS CCA 72 bp | GCAGGTCTGCCAGTGACGTATTTGTCCTGTGGGTCCTaGGCTCTTTCGTGGCACGCAGGGCACTCTCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: AGLPVTYLSCGS*ALSWHAGHSPS Trigger: GGAAGGAGAGTGCCCTGCGTGCCACGAAAGAGCCCAGGACCCACAGGACAAATACGTCACTGGCAGACCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000652779.1 ENST00000653048.1 ENST00000654292.1 ENST00000655318.1 ENST00000660693.1 ENST00000664585.1 ENST00000665433.1 ENST00000665631.1 ENST00000670828.1 ENST00000671430.1 |
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| CDS CCA 72 bp | CTCTCCTTCCTAGGCGAGGACGGGCAGCAGCGGCCCTaGGAAGGCTTCCGTGGAAACTTCCAAAACCACCTT | + |
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Preference number: 6 (lower is better) Translates to: LSFLGEDGQQRP*EGFRGNFQNHL Trigger: AAGGTGGTTTTGGAAGTTTCCACGGAAGCCTTCCCAGGGCCGCTGCTGCCCGTCCTCGCCTAGGAAGGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653048.1 |
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| CDS CCA 72 bp | GTGACGTATTTGTCCTGTGGGTCCTGGGCTCTTTCGTaGCACGCAGGGCACTCTCCTTCCTGGGATGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: VTYLSCGSWALS*HAGHSPSWDGR Trigger: TCTCCCATCCCAGGAAGGAGAGTGCCCTGCGTGCCACGAAAGAGCCCAGGACCCACAGGACAAATACGTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000652779.1 ENST00000654292.1 ENST00000655318.1 ENST00000660693.1 ENST00000664585.1 ENST00000665433.1 ENST00000665631.1 ENST00000670828.1 ENST00000671430.1 |
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| CDS CAA 90 bp | AAAATGGCGGTGCGCGCAGACTGCCTCCCTCCTCTTCATTGTAGCTaGATCCTGCGCAGTGACCGTTCGGAAAGAGTCAGGCCTGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: KMAVRADCLPPLHCS*ILRSDRSERVRPGR Trigger: CCTCCCAGGCCTGACTCTTTCCGAACGGTCACTGCGCAGGATCAAGCTACAATGAAGAGGAGGGAGGCAGTCTGCGCGCACCGCCATTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654292.1 ENST00000660693.1 |
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| CDS CAA 90 bp | AAAATGGCGGTGCGCGCAGACTGCCTCCCTCCTCTTCATTGTAGCTaGATCCTGCGCAGTGACCGTTCACGGAAAGAGTCAGGCCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: KMAVRADCLPPLHCS*ILRSDRSRKESGLG Trigger: TCCCAGGCCTGACTCTTTCCGTGAACGGTCACTGCGCAGGATCAAGCTACAATGAAGAGGAGGGAGGCAGTCTGCGCGCACCGCCATTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000652779.1 ENST00000653048.1 ENST00000655318.1 ENST00000664585.1 ENST00000665631.1 ENST00000670828.1 ENST00000671430.1 |
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| CDS TCA 72 bp | ACTGGTTCTGAGGTATGTGGGACTAGCCTGGCTGGCTaGCCAGGCTTCTTGAGCCCCACAGGCCTCTTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: TGSEVCGTSLAG*PGFLSPTGLFH Trigger: GTGAAAGAGGCCTGTGGGGCTCAAGAAGCCTGGTCAGCCAGCCAGGCTAGTCCCACATACCTCAGAACCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000448559.5 ENST00000451810.3 ENST00000652779.1 ENST00000653048.1 ENST00000654292.1 ENST00000655318.1 ENST00000660693.1 ENST00000660989.1 ENST00000665433.1 ENST00000665631.1 ENST00000670828.1 ENST00000671430.1 |
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| CDS TCA 72 bp | TGCGCGCAGACTGCCTCCCTCCTCTTCATTGTAGCTTaGTCCTGCGCAGTGACCGTTCCAGCTGTTGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: CAQTASLLFIVA*SCAVTVPAVGE Trigger: CTCTCCAACAGCTGGAACGGTCACTGCGCAGGATCAAGCTACAATGAAGAGGAGGGAGGCAGTCTGCGCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448559.5 |
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| CDS TCA 72 bp | TGCGCGCAGACTGCCTCCCTCCTCTTCATTGTAGCTTaGTCCTGCGCAGTGACCGTTCGGAAAGAGTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: CAQTASLLFIVA*SCAVTVRKESG Trigger: GCCTGACTCTTTCCGAACGGTCACTGCGCAGGATCAAGCTACAATGAAGAGGAGGGAGGCAGTCTGCGCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654292.1 ENST00000660693.1 |
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| CDS CCA 72 bp | GGAATTCTTCTAGGCGAGGACGGGCAGCAGCGGCCCTaGGAAGGCTTCCGTGGAAACTTCCAAAACCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: GILLGEDGQQRP*EGFRGNFQNHL Trigger: AAGGTGGTTTTGGAAGTTTCCACGGAAGCCTTCCCAGGGCCGCTGCTGCCCGTCCTCGCCTAGAAGAATTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448433.6 ENST00000655318.1 |
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| CDS CAA 72 bp | GTGCGCGCAGACTGCCTCCCTCCTCTTCATTGTAGCTaGATCCTGCGCAGTGACCGTTCCAGCTGTTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: VRADCLPPLHCS*ILRSDRSSCWR Trigger: TCTCCAACAGCTGGAACGGTCACTGCGCAGGATCAAGCTACAATGAAGAGGAGGGAGGCAGTCTGCGCGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448559.5 |
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| CDS CAA 72 bp | GTGCGCGCAGACTGCCTCCCTCCTCTTCATTGTAGCTaGATCCTGCGCAGTGACCGTTCGGAAAGAGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VRADCLPPLHCS*ILRSDRSERVR Trigger: CCTGACTCTTTCCGAACGGTCACTGCGCAGGATCAAGCTACAATGAAGAGGAGGGAGGCAGTCTGCGCGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654292.1 ENST00000660693.1 |
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| CDS CAA 90 bp | AAAATGGCGGTGCGCGCAGACTGCCTCCCTCCTCTTCATTGTAGCTaGATCCTGCGCAGTGACCGTTCCAGCTGTTGGAGAGCAGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: KMAVRADCLPPLHCS*ILRSDRSSCWRAGE Trigger: TTCACCTGCTCTCCAACAGCTGGAACGGTCACTGCGCAGGATCAAGCTACAATGAAGAGGAGGGAGGCAGTCTGCGCGCACCGCCATTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448559.5 |
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| CDS TCA 72 bp | TGCGCGCAGACTGCCTCCCTCCTCTTCATTGTAGCTTaGTCCTGCGCAGTGACCGTTCACGGAAAGAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: CAQTASLLFIVA*SCAVTVHGKSQ Trigger: CTGACTCTTTCCGTGAACGGTCACTGCGCAGGATCAAGCTACAATGAAGAGGAGGGAGGCAGTCTGCGCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000652779.1 ENST00000653048.1 ENST00000655318.1 ENST00000664585.1 ENST00000665631.1 ENST00000670828.1 ENST00000671430.1 |
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| CDS TCA 72 bp | TGCGCGCAGACTGCCTCCCTCCTCTTCATTGTAGCTTaGTCCTGCGCAGTGACCGTTCCTACGATGTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: CAQTASLLFIVA*SCAVTVPTMSL Trigger: CAGTGACATCGTAGGAACGGTCACTGCGCAGGATCAAGCTACAATGAAGAGGAGGGAGGCAGTCTGCGCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000451810.3 ENST00000660989.1 |
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| CDS GCA 72 bp | GAAGAAGAGCAGAATGGGCGAGTACCAGACTGCAGCTaGAGCCAAGCCAGGGAAGAGGCTAAAGAGGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: EEEQNGRVPDCS*SQAREEAKEGP Trigger: AGGACCCTCTTTAGCCTCTTCCCTGGCTTGGCTGCAGCTGCAGTCTGGTACTCGCCCATTCTGCTCTTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000373170.2 ENST00000654292.1 ENST00000664585.1 ENST00000665433.1 ENST00000671430.1 |
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| CDS GCA 72 bp | GGAGGTGAAGAAGAGCAGAATGGGCGAGTACCAGACTaGAGCTGCAGCCAAGCCAGGGAAGAGGCTAAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GGEEEQNGRVPD*SCSQAREEAKE Trigger: CTCTTTAGCCTCTTCCCTGGCTTGGCTGCAGCTGCAGTCTGGTACTCGCCCATTCTGCTCTTCTTCACCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000373170.2 ENST00000654292.1 ENST00000664585.1 ENST00000665433.1 ENST00000671430.1 |
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| CDS CCA 72 bp | AATGGAATTCTAGGCGAGGACGGGCAGCAGCGGCCCTaGGAAGGCTTCCGTGGAAACTTCCAAAACCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: NGILGEDGQQRP*EGFRGNFQNHL Trigger: AAGGTGGTTTTGGAAGTTTCCACGGAAGCCTTCCCAGGGCCGCTGCTGCCCGTCCTCGCCTAGAATTCCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652779.1 |
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| CDS CAA 72 bp | GTGCGCGCAGACTGCCTCCCTCCTCTTCATTGTAGCTaGATCCTGCGCAGTGACCGTTCACGGAAAGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: VRADCLPPLHCS*ILRSDRSRKES Trigger: TGACTCTTTCCGTGAACGGTCACTGCGCAGGATCAAGCTACAATGAAGAGGAGGGAGGCAGTCTGCGCGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000652779.1 ENST00000653048.1 ENST00000655318.1 ENST00000664585.1 ENST00000665631.1 ENST00000670828.1 ENST00000671430.1 |
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| CDS CAA 72 bp | GTGCGCGCAGACTGCCTCCCTCCTCTTCATTGTAGCTaGATCCTGCGCAGTGACCGTTCCTACGATGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: VRADCLPPLHCS*ILRSDRSYDVT Trigger: AGTGACATCGTAGGAACGGTCACTGCGCAGGATCAAGCTACAATGAAGAGGAGGGAGGCAGTCTGCGCGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000451810.3 ENST00000660989.1 |
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| CDS CCA 72 bp | TGGGCTCTTTCGTGGCACGCAGGGCACTCTCCTTCCTaGGATGGGAGAATGGAATTCTTCTTGCCAGGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: WALSWHAGHSPS*DGRMEFFLPGK Trigger: CTTACCTGGCAAGAAGAATTCCATTCTCCCATCCCAGGAAGGAGAGTGCCCTGCGTGCCACGAAAGAGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660693.1 ENST00000670828.1 |
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| CDS TCA 72 bp | CAGCTAGCCCTCTGTACTAAGGAACCAGACGAATCTTaGCCTCCCAGGGAACCTAGACCTGGGAAGGCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: QLALCTKEPDES*PPREPRPGKAE Trigger: TTCAGCCTTCCCAGGTCTAGGTTCCCTGGGAGGTCAAGATTCGTCTGGTTCCTTAGTACAGAGGGCTAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000448559.5 ENST00000451810.3 ENST00000652779.1 ENST00000653048.1 ENST00000654292.1 ENST00000655318.1 ENST00000660693.1 ENST00000660989.1 ENST00000665433.1 ENST00000665631.1 ENST00000670828.1 ENST00000671430.1 |
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| CDS GCA 72 bp | ACCGTTCCTACGATGTCACTGCACATGAAAATGACCTaGATCCTCCCTCCTGTGGGTACCGGCAGATGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: TVPTMSLHMKMT*ILPPVGTGRWS Trigger: AGACCATCTGCCGGTACCCACAGGAGGGAGGATGCAGGTCATTTTCATGTGCAGTGACATCGTAGGAACGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000451810.3 ENST00000660989.1 |
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| CDS CCA 72 bp | GGCACGCAGGGCACTCTCCTTCCTGGGATGGGAGAATaGAATTCTTCTTCCGTGAGAGAGAAAATACGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GTQGTLLPGMGE*NSSSVREKIRR Trigger: CCTCCGTATTTTCTCTCTCACGGAAGAAGAATTCCATTCTCCCATCCCAGGAAGGAGAGTGCCCTGCGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000373170.2 ENST00000654292.1 ENST00000664585.1 ENST00000665433.1 ENST00000671430.1 |
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| CDS CAA 90 bp | ACGAATCTTGACCTCCCAGGGAACCTAGACCTGGGAAGGCTGAACTaGCTATTTGAGGGTCAAGTCTACTCCCTGAAGGTGGAGTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TNLDLPGNLDLGRLN*LFEGQVYSLKVECW Trigger: CCAGCACTCCACCTTCAGGGAGTAGACTTGACCCTCAAATAGCAAGTTCAGCCTTCCCAGGTCTAGGTTCCCTGGGAGGTCAAGATTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000448559.5 ENST00000451810.3 ENST00000652779.1 ENST00000653048.1 ENST00000654292.1 ENST00000655318.1 ENST00000660693.1 ENST00000660989.1 ENST00000665433.1 ENST00000665631.1 ENST00000670828.1 ENST00000671430.1 |
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| CDS TCA 72 bp | TCCGTGGAAACTTCCAAAACCACCTTGCCAGGTAAGTaGAAGTGCGCTCCGTTCTCTAGCCACATCCTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SVETSKTTLPGK*KCAPFSSHILG Trigger: GCCTAGGATGTGGCTAGAGAACGGAGCGCACTTTCACTTACCTGGCAAGGTGGTTTTGGAAGTTTCCACGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000652779.1 ENST00000653048.1 ENST00000654292.1 ENST00000655318.1 ENST00000664585.1 ENST00000665433.1 ENST00000671430.1 |
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| CDS GCA 72 bp | CCTGAGTACTTCTGTATCTTCTGTTCTCAGTGTGCCTaGAGTGAAGGTCTCAGGGCTTCAGCAAGCTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PEYFCIFCSQCA*SEGLRASASWV Trigger: CACCCAGCTTGCTGAAGCCCTGAGACCTTCACTGCAGGCACACTGAGAACAGAAGATACAGAAGTACTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664585.1 |
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| CDS CCA 72 bp | ACAGTTCAACAAGGAACTGCAGCGGCAGATAGTGTTTaGGAGGTGCCAGGTGGGATACAGGAGAAAGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: TVQQGTAAADSV*EVPGGIQEKGM Trigger: CATGCCTTTCTCCTGTATCCCACCTGGCACCTCCCAAACACTATCTGCCGCTGCAGTTCCTTGTTGAACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451810.3 |
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| CDS CAA 72 bp | GCATCCTCCCTCCTGTGGGTACCGGCAGATGGTCTTTaGGTTTCTGGCTTTAATCCTGGGGTACAAATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ASSLLWVPADGL*VSGFNPGVQIL Trigger: CAGGATTTGTACCCCAGGATTAAAGCCAGAAACCAAAAGACCATCTGCCGGTACCCACAGGAGGGAGGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000451810.3 ENST00000660989.1 |
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| CDS TCA 72 bp | GGTACAAATCCTGTAGCCGTCTGCTCACCAGATCCCTaGAGACTGCACCGTTCTCAGCTCCATGCTTTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GTNPVAVCSPDP*RLHRSQLHALE Trigger: TTCTAAAGCATGGAGCTGAGAACGGTGCAGTCTTCAGGGATCTGGTGAGCAGACGGCTACAGGATTTGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451810.3 |
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| CDS TCA 72 bp | GGTACAAATCCTGTAGCCGTCTGCTCACCAGATCCCTaGAGACTGCACCGTTCTCTGTGTATAGAGCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GTNPVAVCSPDP*RLHRSLCIEQA Trigger: AGCTTGCTCTATACACAGAGAACGGTGCAGTCTTCAGGGATCTGGTGAGCAGACGGCTACAGGATTTGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660989.1 |
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| CDS GCA 72 bp | GCAGGCTACGGGTATCTTCCAGGAACAGATGAAGGTTaGGAAATAACTGCCAACTGTCTTCTGCTCTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: AGYGYLPGTDEG*EITANCLLLWQ Trigger: CTGCCAGAGCAGAAGACAGTTGGCAGTTATTTCGCAACCTTCATCTGTTCCTGGAAGATACCCGTAGCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000448433.6 ENST00000652779.1 ENST00000653048.1 ENST00000665631.1 ENST00000671430.1 |
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| CDS CAA 72 bp | CCCATGATCACACAGCTTAGATGGAAGACTTGGGACTaGACAAGGGGAACTTCTGACCCCAGATCTGGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PMITQLRWKTWD*TRGTSDPRSGF Trigger: GAACCCAGATCTGGGGTCAGAAGTTCCCCTTGTCAAGTCCCAAGTCTTCCATCTAAGCTGTGTGATCATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665433.1 |
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| CDS CAA 72 bp | GTGCGCGCAGACTGCCTCCCTCCTCTTCATTGTAGCTaGATCCTGCGCAGTGACCGTTCCTATAAAAGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: VRADCLPPLHCS*ILRSDRSYKRK Trigger: TTTTCTTTTATAGGAACGGTCACTGCGCAGGATCAAGCTACAATGAAGAGGAGGGAGGCAGTCTGCGCGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665433.1 |
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| CDS CAA 72 bp | TCTCCTCCACTATCTCATGCCGGAGTCTGTCTGGGATaGGAGCAAGGAAGATCTCATGGTCTAGTCCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SPPLSHAGVCLG*EQGRSHGLVLS Trigger: GGAAAGGACTAGACCATGAGATCTTCCTTGCTCCAATCCCAGACAGACTCCGGCATGAGATAGTGGAGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664585.1 |
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| CDS TCA 72 bp | TGCGCGCAGACTGCCTCCCTCCTCTTCATTGTAGCTTaGTCCTGCGCAGTGACCGTTCCTATAAAAGAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: CAQTASLLFIVA*SCAVTVPIKEK Trigger: TTTTTCTTTTATAGGAACGGTCACTGCGCAGGATCAAGCTACAATGAAGAGGAGGGAGGCAGTCTGCGCGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665433.1 |
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| CDS CAA 90 bp | AGCCAGAATTCTCCTCCACTATCTCATGCCGGAGTCTGTCTGGGATaGGAGCAAGGAAGATCTCATGGTCTAGTCCTTTCCAAGATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SQNSPPLSHAGVCLG*EQGRSHGLVLSKMS Trigger: TGACATCTTGGAAAGGACTAGACCATGAGATCTTCCTTGCTCCAATCCCAGACAGACTCCGGCATGAGATAGTGGAGGAGAATTCTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664585.1 |
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| CDS TCA 72 bp | GGCCAAGTAAGTTCTTCTTCATTCTTTCAGCAGTCCTaGTCTTCTTGGGGAGCACCCCTAAATCAGCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: GQVSSSSFFQQS*SSWGAPLNQPV Trigger: GACAGGCTGATTTAGGGGTGCTCCCCAAGAAGATCAGGACTGCTGAAAGAATGAAGAAGAACTTACTTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000652779.1 ENST00000653048.1 ENST00000654292.1 ENST00000660693.1 ENST00000664585.1 ENST00000665433.1 ENST00000665631.1 ENST00000670828.1 ENST00000671430.1 |
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| CDS TCA 72 bp | AAGAAGAGGGATGAAGGGAAGGGGCCCAATTCCTCTTaGCTGATTCTAAAGCTCATAGGGGGATTCCAACTC | + |
|
Preference number: 6 (lower is better) Translates to: KKRDEGKGPNSS*LILKLIGGFQL Trigger: GAGTTGGAATCCCCCTATGAGCTTTAGAATCAGTCAAGAGGAATTGGGCCCCTTCCCTTCATCCCTCTTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 14 transcripts: ENST00000373170.2 ENST00000448433.6 ENST00000448559.5 ENST00000451810.3 ENST00000652779.1 ENST00000653048.1 ENST00000654292.1 ENST00000655318.1 ENST00000660693.1 ENST00000660989.1 ENST00000665433.1 ENST00000665631.1 ENST00000670828.1 ENST00000671430.1 |
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| CDS CCA 72 bp | GTCTTTCCCATGATCACACAGCTTAGATGGAAGACTTaGGACTTGACAAGGGGAACTTCTGACCCCAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: VFPMITQLRWKT*DLTRGTSDPRS Trigger: AGATCTGGGGTCAGAAGTTCCCCTTGTCAAGTCCCAAGTCTTCCATCTAAGCTGTGTGATCATGGGAAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665433.1 |
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| CDS TCA 72 bp | GGCCAAGTAAGTTCTTCTTCATTCTTTCAGCAGTCCTaGTCTTCTTGGGGAGCACCCCTAAATCAGCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GQVSSSSFFQQS*SSWGAPLNQLS Trigger: ACTGAGCTGATTTAGGGGTGCTCCCCAAGAAGATCAGGACTGCTGAAAGAATGAAGAAGAACTTACTTGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655318.1 |
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| CDS TCA 72 bp | CTCCCATTCTCACAAGAATTCTGGATTAGGGCATTATaGTTGTGTCACTTTCCAGTTGAGCGGGCATGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LPFSQEFWIRAL*LCHFPVERACP Trigger: TGGGCATGCCCGCTCAACTGGAAAGTGACACAATCATAATGCCCTAATCCAGAATTCTTGTGAGAATGGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665433.1 |
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| CDS TCA 72 bp | GGGATAATTGATCTTCTGGTCCCTTTAGCCATCAGCTaGATATGCTCCTGGAGCCAGAATTCTCCTCCACTA | + |
|
Preference number: 6 (lower is better) Translates to: GIIDLLVPLAIS*ICSWSQNSPPL Trigger: TAGTGGAGGAGAATTCTGGCTCCAGGAGCATATTCAGCTGATGGCTAAAGGGACCAGAAGATCAATTATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664585.1 |
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| CDS CCA 72 bp | AAGACTGCACCGTTCTCTGTGTATAGAGCAAGCTGCTaGTTAGAGGATCTGAAGCTACTTAATGCACTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: KTAPFSVYRASC*LEDLKLLNALA Trigger: CGCAAGTGCATTAAGTAGCTTCAGATCCTCTAACCAGCAGCTTGCTCTATACACAGAGAACGGTGCAGTCTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660989.1 |
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| CDS CAA 90 bp | CACCATTACAGTGTTGAAATTCGAAAAGACCTCAGGAACACTTTTTaGTTAAGGGATATAATTGTCAGCCAGGCTAGGCAACAGTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: HHYSVEIRKDLRNTF*LRDIIVSQARQQSL Trigger: CAGTGACTGTTGCCTAGCCTGGCTGACAATTATATCCCTTAACAAAAAAGTGTTCCTGAGGTCTTTTCGAATTTCAACACTGTAATGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664585.1 |
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