RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TDRD9 (Homo sapiens)

Ensembl gene IDs: ENSG00000156414

Ensembl transcript IDs: ENST00000339063.6, ENST00000409874.9, ENST00000466378.1, ENST00000496087.5, ENST00000554571.1, ENST00000557332.5

Found 478 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTCCACAGCTTCCTGAGGGGTGTGCTGGAGGCCACCTGTGGACATaGTCAGGTGCCGAGCACAACCAGTTTGTGGAGCTGGTAGAGAAA +
Preference number: 1 (lower is better)
Translates to: PPQLPEGCAGGHLWT*SGAEHNQFVELVEK
Trigger: TTTCTCTACCAGCTCCACAAACTGGTTGTGCTCGGCACCTGAGCATGTCCACAGGTGGCCTCCAGCACACCCCTCAGGAAGCTGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR TCA 90 bp ACCGGTGCGAATAACATGCTGAGGAGAGCCGGGAGGCCAGGGATATaGGGCATCAGAGAGGTTTCTCTCAGCAGCATCGTAGATCCAGTC +
Preference number: 1 (lower is better)
Translates to: TGANNMLRRAGRPGI*GIREVSLSSIVDPV
Trigger: GACTGGATCTACGATGCTGCTGAGAGAAACCTCTCTGATGCCTCATATCCCTGGCCTCCCGGCTCTCCTCAGCATGTTATTCGCACCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR CCA 90 bp CGCAAGCTCCATGTCGTGCTCGGGCAGTATGGAAGCCCCTGTAGCTaGATTCCACCCCAAACCACAAAGGACTCCAGTATAGTACTTGCC +
Preference number: 1 (lower is better)
Translates to: RKLHVVLGQYGSPCS*IPPQTTKDSSIVLA
Trigger: GGCAAGTACTATACTGGAGTCCTTTGTGGTTTGGGGTGGAATCCAGCTACAGGGGCTTCCATACTGCCCGAGCACGACATGGAGCTTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR TCA 90 bp GCAGCCCTGAGAATATTAACCTCGACGACATCCTCCACGCTGAATTaGACGTCAAACGCAAGCTCCATGTCGTGCTCGGGCAGTATGGAA +
Preference number: 1 (lower is better)
Translates to: AALRILTSTTSSTLN*TSNASSMSCSGSME
Trigger: TTCCATACTGCCCGAGCACGACATGGAGCTTGCGTTTGACGTTCAATTCAGCGTGGAGGATGTCGTCGAGGTTAATATTCTCAGGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR TCA 90 bp CATTCTGATCAATCCTTAACTCTATCACCGGTGCGAATAACATGCTaGGGAGAGCCGGGAGGCCAGGGATATGAGGCATCAGAGAGGTTT +
Preference number: 1 (lower is better)
Translates to: HSDQSLTLSPVRITC*GEPGGQGYEASERF
Trigger: AAACCTCTCTGATGCCTCATATCCCTGGCCTCCCGGCTCTCCTCAGCATGTTATTCGCACCGGTGATAGAGTTAAGGATTGATCAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR CCA 90 bp ATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTaGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGC +
Preference number: 1 (lower is better)
Translates to: ITQREKKKEKAFRMQ*AQTVTPRHRGKSVC
Trigger: GCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
3UTR CCA 90 bp GCTTTGGATCAACCTGATTCCACTCGTAGGGCTTTTCATGCCACTTaGGAACAATCTTCTCCCTTGGTTTTGACTGACAGAACAAACCTA +
Preference number: 1 (lower is better)
Translates to: ALDQPDSTRRAFHAT*EQSSPLVLTDRTNL
Trigger: TAGGTTTGTTCTGTCAGTCAAAACCAAGGGAGAAGATTGTTCCCAAGTGGCATGAAAAGCCCTACGAGTGGAATCAGGTTGATCCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR-3UTR TCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGTGCGAATAACATGCTaGGGAGAGCCGGGAGGCCAG +
Preference number: 2 (lower is better)
Translates to: PDTEESQSAEGAWNPASTVRITC*GEPGGQ
Trigger: CTGGCCTCCCGGCTCTCCTCAGCATGTTATTCGCAC...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR-3UTR GCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCAAGCTCCATGTCGTaGTCGGGCAGTATGGAAGCC +
Preference number: 2 (lower is better)
Translates to: PDTEESQSAEGAWNPASTASSMS*SGSMEA
Trigger: GGCTTCCATACTGCCCGAGCACGACATGGAGCTTGC...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR-3UTR CCA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCGGAAGCCCCTGTAGCTaGATTCCACCCCAAACCACA +
Preference number: 2 (lower is better)
Translates to: HPDTEESQSAEGAWNPASGSPCS*IPPQTT
Trigger: TGTGGTTTGGGGTGGAATCCAGCTACAGGGGCTTCC...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR-3UTR TCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGGGAGGCCAGGGATATaGGGCATCAGAGAGGTTTCT +
Preference number: 2 (lower is better)
Translates to: PDTEESQSAEGAWNPASTGRPGI*GIREVS
Trigger: AGAAACCTCTCTGATGCCTCATATCCCTGGCCTCCC...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR-3UTR GCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGTGTTCTTCCCTCTGCTaGTCTCACGGTCGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: VGTDCNTQTQRKVSLRRECSSLC*SHGRPA
Trigger: AGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACA...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR-3UTR GCA 90 bp GTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTTGGATCCTGGCCCAAGACACTTaGATCCATTTGGTCCATCAC +
Preference number: 2 (lower is better)
Translates to: VLPSAALTVGLLHDQLWILAQDT*IHLVHH
Trigger: GTGATGGACCAAATGGATGCAAGTGTCTTGGGCCAG...GATCCAAAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR CAA 90 bp AGCAGCCCTGAGAATATTAACCTCGACGACATCCTCCACGCTGAATaGAACGTCAAACGCAAGCTCCATGTCGTGCTCGGGCAGTATGGA +
Preference number: 2 (lower is better)
Translates to: SSPENINLDDILHAE*NVKRKLHVVLGQYG
Trigger: TCCATACTGCCCGAGCACGACATGGAGCTTGCGTTTGACGTTCAATTCAGCGTGGAGGATGTCGTCGAGGTTAATATTCTCAGGGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR-3UTR TCA 90 bp CCTGATTCCACTCGTAGGGCTTTTCATGCCACTTGGGAACAATCTTCTCCCTTGACCAGCATTCTCTGGTaGAGGTCTTCAGGGGCGTCA +
Preference number: 2 (lower is better)
Translates to: PDSTRRAFHATWEQSSPLTSILW*RSSGAS
Trigger: TGACGCCCCTGAAGACCTTCACCAGAGAATGCTGGT...CAAGGGAGAAGATTGTTCCCAAGTGGCATGAAAAGCCCTACGAGTGGAATCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR-3UTR TCA 90 bp AAGGTGTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTTTCCCTTGGTTTTGACTaGCAGAACAAACCTAAAAGC +
Preference number: 2 (lower is better)
Translates to: KVFFPLLLSRSACSMTSFSLGFD*QNKPKS
Trigger: GCTTTTAGGTTTGTTCTGTCAGTCAAAACCAAGGGA...AAAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR CAA 90 bp TCTGGCCCAAGACACTTGCATCCATTTGGTCCATCACAGACTAGCTaGTTAATAGCAGCCCTGAGAATATTAACCTCGACGACATCCTCC +
Preference number: 2 (lower is better)
Translates to: SGPRHLHPFGPSQTS*LIAALRILTSTTSS
Trigger: GGAGGATGTCGTCGAGGTTAATATTCTCAGGGCTGCTATTAACAAGCTAGTCTGTGATGGACCAAATGGATGCAAGTGTCTTGGGCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR-3UTR TCA 90 bp GATCAACCTGATTCCACTCGTAGGGCTTTTCATGCCACTTGGGAACAATCTTCTCGACATCCTCCACGCTaGATTGAACGTCAAACGCAA +
Preference number: 2 (lower is better)
Translates to: DQPDSTRRAFHATWEQSSRHPPR*IERQTQ
Trigger: TTGCGTTTGACGTTCAATTCAGCGTGGAGGATGTCG...AGAAGATTGTTCCCAAGTGGCATGAAAAGCCCTACGAGTGGAATCAGGTTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR-3UTR GCA 90 bp GGCAATGTCTTGAAGCTGCGCAACTCTCTCTGGCCCAAGACACTTGCATCCATTCTCCAGTATAGTACTTaGCATTCTGATCAATCCTTA +
Preference number: 2 (lower is better)
Translates to: GNVLKLRNSLWPKTLASILQYST*HSDQSL
Trigger: TAAGGATTGATCAGAATGGCAAGTACTATACTGGAG...AATGGATGCAAGTGTCTTGGGCCAGAGAGAGTTGCGCAGCTTCAAGACATTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR-3UTR CAA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCCTGACGGGCAATGTCTaGAAGCTGCGCAACTCTCTC +
Preference number: 3 (lower is better)
Translates to: HPDTEESQSAEGAWNPASLTGNV*KLRNSL
Trigger: GAGAGAGTTGCGCAGCTTCAAGACATTGCCCGTCAG...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR TCA 72 bp TCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATaGCCAGCTTTGGATCAACCTGATTCCACTCGTAGG +
Preference number: 3 (lower is better)
Translates to: SSLCCSHGRPAP*PALDQPDSTRR
Trigger: CCTACGAGTGGAATCAGGTTGATCCAAAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR GCA 72 bp CAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTaGGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTC +
Preference number: 3 (lower is better)
Translates to: QTVTPRHRGKSV*GGSLESSLHSF
Trigger: GAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
3UTR CCA 72 bp CATGTCGTGCTCGGGCAGTATGGAAGCCCCTGTAGCTaGATTCCACCCCAAACCACAAAGGACTCCAGTATA +
Preference number: 3 (lower is better)
Translates to: HVVLGQYGSPCS*IPPQTTKDSSI
Trigger: TATACTGGAGTCCTTTGTGGTTTGGGGTGGAATCCAGCTACAGGGGCTTCCATACTGCCCGAGCACGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR TCA 72 bp AATAACATGCTGAGGAGAGCCGGGAGGCCAGGGATATaGGGCATCAGAGAGGTTTCTCTCAGCAGCATCGTA +
Preference number: 3 (lower is better)
Translates to: NNMLRRAGRPGI*GIREVSLSSIV
Trigger: TACGATGCTGCTGAGAGAAACCTCTCTGATGCCTCATATCCCTGGCCTCCCGGCTCTCCTCAGCATGTTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR TCA 72 bp CAATCCTTAACTCTATCACCGGTGCGAATAACATGCTaGGGAGAGCCGGGAGGCCAGGGATATGAGGCATCA +
Preference number: 3 (lower is better)
Translates to: QSLTLSPVRITC*GEPGGQGYEAS
Trigger: TGATGCCTCATATCCCTGGCCTCCCGGCTCTCCTCAGCATGTTATTCGCACCGGTGATAGAGTTAAGGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR-3UTR CAA 90 bp TGCCGAGCACAACCAGTTTGTGGAGCTGGTAGAGAAAGGTGTTCTTCCCTCTGCGGCTTTTCATGCCACTaGGGAACAATCTTCTCCCTT +
Preference number: 3 (lower is better)
Translates to: CRAQPVCGAGRERCSSLCGFSCH*GTIFSL
Trigger: AAGGGAGAAGATTGTTCCCAAGTGGCATGAAAAGCC...GCAGAGGGAAGAACACCTTTCTCTACCAGCTCCACAAACTGGTTGTGCTCGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR TCA 72 bp AGAATATTAACCTCGACGACATCCTCCACGCTGAATTaGACGTCAAACGCAAGCTCCATGTCGTGCTCGGGC +
Preference number: 3 (lower is better)
Translates to: RILTSTTSSTLN*TSNASSMSCSG
Trigger: GCCCGAGCACGACATGGAGCTTGCGTTTGACGTTCAATTCAGCGTGGAGGATGTCGTCGAGGTTAATATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR-3UTR CAA 90 bp AGCTTGTTAATAGCAGCCCTGAGAATATTAACCTCGACGACATCCTCCACGCTGGTAGATCCAGTCGCATaGATGGAAAGGGAAGCTGCA +
Preference number: 3 (lower is better)
Translates to: SLLIAALRILTSTTSSTLVDPVA*MEREAA
Trigger: TGCAGCTTCCCTTTCCATCAATGCGACTGGATCTAC...CAGCGTGGAGGATGTCGTCGAGGTTAATATTCTCAGGGCTGCTATTAACAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR-3UTR CAA 90 bp GATCAACCTGATTCCACTCGTAGGGCTTTTCATGCCACTTGGGAACAATCTTCTATCCTCCACGCTGAATaGAACGTCAAACGCAAGCTC +
Preference number: 3 (lower is better)
Translates to: DQPDSTRRAFHATWEQSSILHAE*NVKRKL
Trigger: GAGCTTGCGTTTGACGTTCAATTCAGCGTGGAGGAT...AGAAGATTGTTCCCAAGTGGCATGAAAAGCCCTACGAGTGGAATCAGGTTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR CCA 72 bp CAACCTGATTCCACTCGTAGGGCTTTTCATGCCACTTaGGAACAATCTTCTCCCTTGGTTTTGACTGACAGA +
Preference number: 3 (lower is better)
Translates to: QPDSTRRAFHAT*EQSSPLVLTDR
Trigger: TCTGTCAGTCAAAACCAAGGGAGAAGATTGTTCCCAAGTGGCATGAAAAGCCCTACGAGTGGAATCAGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR TCA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCCGTAGGACTCCTCCGTaGGCTCGGCATAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: HPDTEESQSAEGAWNPASRRTPP*ARHSPA
Trigger: AGCAGGGCTATGCCGAGCTCACGGAGGAGTCCTACG...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCGGGGAAAGGGCAGTaGCCAGCAGAGCTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTAGKGQ*PAELSA
Trigger: AGCCGAGAGCTCTGCTGGCCACTGCCCTTTCCCCGC...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGAGAGGCGAACCACTaGCTGGCCCCGTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHREANH*LAPSLQ
Trigger: CTGGAGTGACGGGGCCAGCCAGTGGTTCGCCTCTCT...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCCGTAGGACTCCTCCGTaGGCTCGGCATAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASRRTPP*ARHSPA
Trigger: AGCAGGGCTATGCCGAGCTCACGGAGGAGTCCTACG...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp AAGGTGTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTTGCGGGGAAAGGGCAGTaGCCAGCAGAGCTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: KVFFPLLLSRSACSMTSFAGKGQ*PAELSA
Trigger: AGCCGAGAGCTCTGCTGGCCACTGCCCTTTCCCCGC...AAAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGGCGGGGAAAGGGCAGTaGCCAGCAGAGCTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRREAGKGQ*PAELSA
Trigger: AGCCGAGAGCTCTGCTGGCCACTGCCCTTTCCCCGC...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCAAGAGAGGCGAACCACTaGCTGGCCCCGTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPREANH*LAPSLQ
Trigger: CTGGAGTGACGGGGCCAGCCAGTGGTTCGCCTCTCT...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTGGAGGCCACCTGTaGACATGCTCAGGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTAGGHL*TCSGAE
Trigger: CTCGGCACCTGAGCATGTCCACAGGTGGCCTCCAGC...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACGGCATCCTGGACCCCTaGGTACTGGTACACATCCAC +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHGILDP*VLVHIH
Trigger: GTGGATGTGTACCAGTACTCAGGGGTCCAGGATGCC...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCGTAGGACTCCTCCGTaGGCTCGGCATAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRRERRTPP*ARHSPA
Trigger: AGCAGGGCTATGCCGAGCTCACGGAGGAGTCCTACG...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCGTGCGAATAACATGCTaGGGAGAGCCGGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASVRITC*GEPGGQ
Trigger: CTGGCCTCCCGGCTCTCCTCAGCATGTTATTCGCAC...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR TCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCTCTTCCGGGGCTGGGTaGCCACAATGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASSSGAG*PQCCSR
Trigger: CCTACTGCAGCATTGTGGTCACCCAGCCCCGGAAGA...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR GCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCTTGTCTTGGGGTCCTTaGCAGCCAGCTCCCTCACCG +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASLSWGP*QPAPSP
Trigger: CGGTGAGGGAGCTGGCTGGCAAGGACCCCAAGACAA...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACGCAAGCTCCATGTCGTaGTCGGGCAGTATGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHASSMS*SGSMEA
Trigger: GGCTTCCATACTGCCCGAGCACGACATGGAGCTTGC...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR GCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACCTCTCACGGTCGGCCTaGTCCATGACCAGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHLSRSA*SMTSFG
Trigger: TCCAAAGCTGGTCATGGAGCAGGCCGACCGTGAGAG...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGGTGTTCTTCCCTCTaGTGCTCTCACGGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHRCSSL*CSHGRP
Trigger: AGGCCGACCGTGAGAGCAGCAGAGGGAAGAACACCT...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGGCCACCTGTGGACATaGTCAGGTGCCGAGCACAAC +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTGHLWT*SGAEHN
Trigger: GTTGTGCTCGGCACCTGAGCATGTCCACAGGTGGCC...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACTGCGGGAGCTGAGTaGTTTTACCGCTTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: HPDTEESQSAEGAWNPASTAGAE*FYRFPW
Trigger: CCACGGGAAGCGGTAAAAGCACTCAGCTCCCGCAGT...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR GCA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGCCTGGCGATGCTGCTTaGCCCTATCTTCCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGPGDAA*PYLPGL
Trigger: CAGCCCCGGAAGATAGGGGCAAGCAGCATCGCCAGG...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR GCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCATCCACCTGGCGATGCTaGTTGCCCCTATCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPSTWRC*LPLSSG
Trigger: CCCGGAAGATAGGGGCAAGCAGCATCGCCAGGTGGA...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR CCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACGCTCCAACACAAACTaGGCCCCCGACCAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPRSNTN*APDQAL
Trigger: CAAGGCTTGGTCGGGGGCCCAGTTTGTGTTGGAGCG...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGAGAGGCGAACCACTaGCTGGCCCCGTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGREANH*LAPSLQ
Trigger: CTGGAGTGACGGGGCCAGCCAGTGGTTCGCCTCTCT...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCTCTGCGGAGGGAGCCTaGAATCCAGCCTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASSAEGA*NPASTA
Trigger: AGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGA...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCATCTGCGGAGGGAGCCTaGAATCCAGCCTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPSAEGA*NPASTA
Trigger: AGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGA...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGATGGCCTTGGACCTaGCCCACTGGTTGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHRWPWT*PTGWLD
Trigger: GTCCAACCAACCAGTGGGCCAGGTCCAAGGCCATCT...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR CCA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCAGCCAAAGATGGCCTTaGACCTGGCCCACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: HPDTEESQSAEGAWNPASSQRWP*TWPTGW
Trigger: CCAACCAGTGGGCCAGGTCCAAGGCCATCTTTGGCT...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR TCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACGGACGTCTCTTATGTTaGTGGCATCCTGGACCCCTG +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHGRLLC*WHPGPL
Trigger: CAGGGGTCCAGGATGCCATCAACATAAGAGACGTCC...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCGGTCGGCCTGCTCCATaGCCAGCTTTGGATCAACCT +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASGRPAP*PALDQP
Trigger: AGGTTGATCCAAAGCTGGTCATGGAGCAGGCCGACC...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAAGGCACGCTCTTTACTaGTCCACCTGGCGATGCTGC +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTRHALY*STWRCC
Trigger: GCAGCATCGCCAGGTGGATCAGTAAAGAGCGTGCCT...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR GCA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGTTGTCTTGGGGTCCTTaGCAGCCAGCTCCCTCACCG +
Preference number: 4 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGLSWGP*QPAPSP
Trigger: CGGTGAGGGAGCTGGCTGGCAAGGACCCCAAGACAA...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp AAGGTGTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTTCCTTCACAAGGAGGGTaGAGCCGCTCACCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: KVFFPLLLSRSACSMTSFPSQGG*SRSPER
Trigger: CCTCTCTGGTGAGCGGCTGCACCCTCCTTGTGAAGG...AAAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACACGTGCAGGACGCTGTaGACCACAGAGAAGACCTTC +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHTCRTL*TTEKTF
Trigger: GAAGGTCTTCTCTGTGGTGCACAGCGTCCTGCACGT...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACACTCTCACGGTCGGCCTaGTCCATGACCAGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTLSRSA*SMTSFG
Trigger: TCCAAAGCTGGTCATGGAGCAGGCCGACCGTGAGAG...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCAGGTGTTCTTCCCTCTaGTGCTCTCACGGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASRCSSL*CSHGRP
Trigger: AGGCCGACCGTGAGAGCAGCAGAGGGAAGAACACCT...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGGGCCACCTGTGGACATaGTCAGGTGCCGAGCACAAC +
Preference number: 4 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGGHLWT*SGAEHN
Trigger: GTTGTGCTCGGCACCTGAGCATGTCCACAGGTGGCC...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGTCTGCGGAGGGAGCCTaGAATCCAGCCTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRRESAEGA*NPASTA
Trigger: AGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGA...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCATTGGACCTGGCCCACTaGTTGGTTGGACACTGCGAC +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPLDLAH*LVGHCD
Trigger: GTCGCAGTGTCCAACCAACCAGTGGGCCAGGTCCAA...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR TCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAACCAGCATTCTCTGGTaGAGGTCTTCAGGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTTSILW*RSSGAS
Trigger: TGACGCCCCTGAAGACCTTCACCAGAGAATGCTGGT...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR TCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCGGGAGGCCAGGGATATaGGGCATCAGAGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASGRPGI*GIREVS
Trigger: AGAAACCTCTCTGATGCCTCATATCCCTGGCCTCCC...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR TCA 90 bp AAAGGTGTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTGGTCGGCCTGCTCCATaGCCAGCTTTGGATCAACCT +
Preference number: 4 (lower is better)
Translates to: KGVLPSAALTVGLLHDQLGRPAP*PALDQP
Trigger: AGGTTGATCCAAAGCTGGTCATGGAGCAGGCCGACC...AAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACACCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR TCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACACTGAGCTCCTTTGGCTaGGTGACCTTTCGAACGCAG +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTLSSFG*VTFRTQ
Trigger: CTGCGTTCGAAAGGTCACTCAGCCAAAGGAGCTCAG...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR GCA 90 bp GTGTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTTGGAACGTGCAGGACGCTGTaGACCACAGAGAAGACCTTC +
Preference number: 4 (lower is better)
Translates to: VFFPLLLSRSACSMTSFGTCRTL*TTEKTF
Trigger: GAAGGTCTTCTCTGTGGTGCACAGCGTCCTGCACGT...TCCAAAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp AAGGTGTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTTGCAAGCTCCATGTCGTaGTCGGGCAGTATGGAAGCC +
Preference number: 4 (lower is better)
Translates to: KVFFPLLLSRSACSMTSFASSMS*SGSMEA
Trigger: GGCTTCCATACTGCCCGAGCACGACATGGAGCTTGC...AAAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGTGTTCTTCCCTCTGCTaGTCTCACGGTCGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGCSSLC*SHGRPA
Trigger: AGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACA...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACGTGGACATGCTCAGGTaGCGAGCACAACCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHVDMLR*RAQPVC
Trigger: ACAAACTGGTTGTGCTCGGCACCTGAGCATGTCCAC...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCACACGACAGTTGTCTTaGGGTCCTTGCCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASTRQLS*GPCQPA
Trigger: AGCTGGCTGGCAAGGACCCCAAGACAACTGTCGTGT...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAACACGACAGTTGTCTTaGGGTCCTTGCCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTTRQLS*GPCQPA
Trigger: AGCTGGCTGGCAAGGACCCCAAGACAACTGTCGTGT...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACATGGACCCCTGAGTACTaGTACACATCCACGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTWTPEY*YTSTCR
Trigger: CCTGCACGTGGATGTGTACCAGTACTCAGGGGTCCA...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACCTTCATGGCTTTGCTTaGACTCGTAGGACTCCTCCG +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHLHGFA*TRRTPP
Trigger: CGGAGGAGTCCTACGAGTCCAAGCAAAGCCATGAAG...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR CCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCGGAAGCCCCTGTAGCTaGATTCCACCCCAAACCACA +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASGSPCS*IPPQTT
Trigger: TGTGGTTTGGGGTGGAATCCAGCTACAGGGGCTTCC...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR CCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGACCTGGCCCACTGGTTaGTTGGACACTGCGACACAC +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRRETWPTG*LDTATH
Trigger: GTGTGTCGCAGTGTCCAACCAACCAGTGGGCCAGGT...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR CCA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGCCTATCTTCCGGGGCTaGGTGACCACAATGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGPIFRG*VTTMLQ
Trigger: CTGCAGCATTGTGGTCACCCAGCCCCGGAAGATAGG...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR TCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGGGACGTCTCTTATGTTaGTGGCATCCTGGACCCCTG +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRREGRLLC*WHPGPL
Trigger: CAGGGGTCCAGGATGCCATCAACATAAGAGACGTCC...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp GACGACATCCTCCACGCTGAATTGAACGTCAAACGCAAGCTCCATGTCGTGCTCGTGCGAATAACATGCTaGGGAGAGCCGGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: DDILHAELNVKRKLHVVLVRITC*GEPGGQ
Trigger: CTGGCCTCCCGGCTCTCCTCAGCATGTTATTCGCAC...GAGCACGACATGGAGCTTGCGTTTGACGTTCAATTCAGCGTGGAGGATGTCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR TCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACATCCTCCACGCTGAATTaGACGTCAAACGCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTSSTLN*TSNASS
Trigger: GGAGCTTGCGTTTGACGTTCAATTCAGCGTGGAGGA...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR TCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCATATACTGCGGGAGCTaGGTGCTTTTACCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASIYCGS*VLLPLP
Trigger: GGGAAGCGGTAAAAGCACTCAGCTCCCGCAGTATAT...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR GCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCATCTCTGCCCACTCACTaGAAGTGCTCCAACCTCCTT +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPSLPTH*KCSNLL
Trigger: AAGGAGGTTGGAGCACTTGCAGTGAGTGGGCAGAGA...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGGCCCCGTCACTCCAGTaGTTGCCACAAACAAGAGAC +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRREAPSLQ*LPQTRD
Trigger: GTCTCTTGTTTGTGGCAAGCACTGGAGTGACGGGGC...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGGCCCCGTCACTCCAGTaGTTGCCACAAACAAGAGAC +
Preference number: 4 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGAPSLQ*LPQTRD
Trigger: GTCTCTTGTTTGTGGCAAGCACTGGAGTGACGGGGC...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGACGTGCAGGACGCTGTaGACCACAGAGAAGACCTTC +
Preference number: 4 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGTCRTL*TTEKTF
Trigger: GAAGGTCTTCTCTGTGGTGCACAGCGTCCTGCACGT...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCCTGGCCCAAGACACTTaGATCCATTTGGTCCATCAC +
Preference number: 4 (lower is better)
Translates to: HPDTEESQSAEGAWNPASLAQDT*IHLVHH
Trigger: GTGATGGACCAAATGGATGCAAGTGTCTTGGGCCAG...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCGTGGACATGCTCAGGTaGCGAGCACAACCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASVDMLR*RAQPVC
Trigger: ACAAACTGGTTGTGCTCGGCACCTGAGCATGTCCAC...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCAGTGGACATGCTCAGGTaGCGAGCACAACCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPVDMLR*RAQPVC
Trigger: ACAAACTGGTTGTGCTCGGCACCTGAGCATGTCCAC...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGAGGAAAGTCAGTCTaGGGAGGGAGCCTGGAATCC +
Preference number: 4 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGRGKSV*GGSLES
Trigger: GGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCT...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCAAACCAGTCGTTGATCTaGTCGATGGTGAGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPNQSLI*SMVSFR
Trigger: GCGGAAGCTCACCATCGAGCAGATCAACGACTGGTT...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR GCA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACGCCACGTCCTGGCGCTaGACCTCCTCCCTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHATSWR*TSSLAA
Trigger: GGCGGCCAGGGAGGAGGTGCAGCGCCAGGACGTGGC...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR CCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGACACGACAGTTGTCTTaGGGTCCTTGCCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRRETRQLS*GPCQPA
Trigger: AGCTGGCTGGCAAGGACCCCAAGACAACTGTCGTGT...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGTGGACCCCTGAGTACTaGTACACATCCACGTGCAGG +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRREWTPEY*YTSTCR
Trigger: CCTGCACGTGGATGTGTACCAGTACTCAGGGGTCCA...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGTGGACCCCTGAGTACTaGTACACATCCACGTGCAGG +
Preference number: 4 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGWTPEY*YTSTCR
Trigger: CCTGCACGTGGATGTGTACCAGTACTCAGGGGTCCA...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCATGTTGATGGCATCCTaGACCCCTGAGTACTGGTAC +
Preference number: 4 (lower is better)
Translates to: HPDTEESQSAEGAWNPASMLMAS*TPEYWY
Trigger: GTACCAGTACTCAGGGGTCCAGGATGCCATCAACAT...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCGCCTTTAGGATGCAGTaGGCACAGACTGTAACACCC +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASAFRMQ*AQTVTP
Trigger: GGGTGTTACAGTCTGTGCCCACTGCATCCTAAAGGC...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCAGCCTTTAGGATGCAGTaGGCACAGACTGTAACACCC +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPAFRMQ*AQTVTP
Trigger: GGGTGTTACAGTCTGTGCCCACTGCATCCTAAAGGC...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGGGCCCACTGGTTGGTTaGACACTGCGACACACATCA +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRREGPLVG*TLRHTS
Trigger: TGATGTGTGTCGCAGTGTCCAACCAACCAGTGGGCC...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR TCA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCATCTCAGGAACAACATaGTCAGGGATGGAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: HPDTEESQSAEGAWNPASISGTT*SGMELS
Trigger: GGACAACTCCATCCCTGATCATGTTGTTCCTGAGAT...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCATCACCCTTGTGTTCCTaGGCTTTGAGACGTTCATGC +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPSPLCS*ALRRSC
Trigger: GCATGAACGTCTCAAAGCTCAGGAACACAAGGGTGA...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCTCACCCTTGTGTTCCTaGGCTTTGAGACGTTCATGC +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASSPLCS*ALRRSC
Trigger: GCATGAACGTCTCAAAGCTCAGGAACACAAGGGTGA...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCTGTCTGGGACCTGTCTaGTGTGTTAAAGGAGACTTG +
Preference number: 4 (lower is better)
Translates to: HPDTEESQSAEGAWNPASCLGPV*CVKGDL
Trigger: CAAGTCTCCTTTAACACATCAGACAGGTCCCAGACA...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACTGGAAAAGAGGCCCTTaGGAACTTCATGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHWKRGP*ELHGFA
Trigger: AGCAAAGCCATGAAGTTCTCAAGGGCCTCTTTTCCA...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR TCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACGACATCCTCCACGCTaGATTGAACGTCAAACGCAA +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPRHPPR*IERQTQ
Trigger: TTGCGTTTGACGTTCAATTCAGCGTGGAGGATGTCG...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR GCA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGTCTCTGCCCACTCACTaGAAGTGCTCCAACCTCCTT +
Preference number: 4 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGSLPTH*KCSNLL
Trigger: AAGGAGGTTGGAGCACTTGCAGTGAGTGGGCAGAGA...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACCTATATCCATCGAGATaGTGCCGGAAAGGCATTGCA +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHLYPSR*CRKGIA
Trigger: TGCAATGCCTTTCCGGCAGCATCTCGATGGATATAG...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACGAGACGTTCATGCCTTaGACCTTCCCTTCAATTTCC +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHETFMP*TFPSIS
Trigger: GGAAATTGAAGGGAAGGTGCAAGGCATGAACGTCTC...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACGCTTTGAGACGTTCATaGCTTGCACCTTCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHALRRS*LAPSLQ
Trigger: TTGAAGGGAAGGTGCAAGGCATGAACGTCTCAAAGC...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACCGTCACTCCAGTGCTTaGCACAAACAAGAGACTTTG +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHRHSSA*HKQETL
Trigger: CAAAGTCTCTTGTTTGTGGCAAGCACTGGAGTGACG...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCAGGCCCGTGAAGTTCTaGCTTACAGTTTGGAGTACC +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASRPVKF*LTVWST
Trigger: GGTACTCCAAACTGTAAGGCAGAACTTCACGGGCCT...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR GCA 90 bp TGGACATGCTCAGGTGCCGAGCACAACCAGTTTGTGGAGCTGGTAGAGAAAGGTCTCTCACGGTCGGCCTaGTCCATGACCAGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: WTCSGAEHNQFVELVEKGLSRSA*SMTSFG
Trigger: TCCAAAGCTGGTCATGGAGCAGGCCGACCGTGAGAG...ACCTTTCTCTACCAGCTCCACAAACTGGTTGTGCTCGGCACCTGAGCATGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp TGCCGAGCACAACCAGTTTGTGGAGCTGGTAGAGAAAGGTGTTCTTCCCTCTGCTGTTCTTCCCTCTGCTaGTCTCACGGTCGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: CRAQPVCGAGRERCSSLCCSSLC*SHGRPA
Trigger: AGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACA...GCAGAGGGAAGAACACCTTTCTCTACCAGCTCCACAAACTGGTTGTGCTCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACTCGGCATCCCCCAACTaGCGGGTCTCCGCGGCGGGA +
Preference number: 4 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHSASPN*RVSAAG
Trigger: TCCCGCCGCGGAGACCCGGCAGTTGGGGGATGCCGA...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR CCA 90 bp GGCAATGTCTTGAAGCTGCGCAACTCTCTCTGGCCCAAGACACTTGCATCCATTCGCTCCAACACAAACTaGGCCCCCGACCAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: GNVLKLRNSLWPKTLASIRSNTN*APDQAL
Trigger: CAAGGCTTGGTCGGGGGCCCAGTTTGTGTTGGAGCG...AATGGATGCAAGTGTCTTGGGCCAGAGAGAGTTGCGCAGCTTCAAGACATTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CCA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCTCTACCGTCTGCTTCTaGAAGTCCACATTCACCCTT +
Preference number: 4 (lower is better)
Translates to: HPDTEESQSAEGAWNPASSTVCF*KSTFTL
Trigger: AAGGGTGAATGTGGACTTCCAGAAGCAGACGGTAGA...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACTCTACCGTCTGCTTCTaGAAGTCCACATTCACCCTT +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHSTVCF*KSTFTL
Trigger: AAGGGTGAATGTGGACTTCCAGAAGCAGACGGTAGA...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGCAGACAGACCAAGTCTaGATGTGGGTGAGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGQTDQV*MWVSGQ
Trigger: TTGCCCACTCACCCACATCCAGACTTGGTCTGTCTG...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAATGTTGATGGCATCCTaGACCCCTGAGTACTGGTAC +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTMLMAS*TPEYWY
Trigger: GTACCAGTACTCAGGGGTCCAGGATGCCATCAACAT...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCAATGTTGATGGCATCCTaGACCCCTGAGTACTGGTAC +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPMLMAS*TPEYWY
Trigger: GTACCAGTACTCAGGGGTCCAGGATGCCATCAACAT...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp GTGTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTTGGATCTCGTCGTCTTTCATaGGAAAGGGCACAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: VFFPLLLSRSACSMTSFGSRRLS*ERAQSH
Trigger: ATGGCTCTGTGCCCTTTCCCATGAAAGACGACGAGA...TCCAAAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACATCTCGTCGTCTTTCATaGGAAAGGGCACAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTSRRLS*ERAQSH
Trigger: ATGGCTCTGTGCCCTTTCCCATGAAAGACGACGAGA...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR CCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACCTCCATGACCAGCTTTaGATCAACCTGATTCCACTC +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHLHDQL*INLIPL
Trigger: GAGTGGAATCAGGTTGATCCAAAGCTGGTCATGGAG...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp AAAGGTGTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTGCCTTTAGGATGCAGTaGGCACAGACTGTAACACCC +
Preference number: 4 (lower is better)
Translates to: KGVLPSAALTVGLLHDQLAFRMQ*AQTVTP
Trigger: GGGTGTTACAGTCTGTGCCCACTGCATCCTAAAGGC...AAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACACCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACACTTCCCGTGGCCCCATaGATAATCACCACGGAATTA +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTLPVAP*IITTEL
Trigger: TAATTCCGTGGTGATTATCCATGGGGCCACGGGAAG...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR TCA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCATAATACTCTTCAACTaGATGGGGCTTGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: HPDTEESQSAEGAWNPASIILFN*MGLAFH
Trigger: GTGGAAGGCAAGCCCCATTCAGTTGAAGAGTATTAT...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACGCACGGCCTTTTCTCTaGTTACAGCTGGTTTTAGAA +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHARPFL*LQLVLE
Trigger: TTCTAAAACCAGCTGTAATCAGAGAAAAGGCCGTGC...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp GTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTTGGATCATCTCAGGAACAACATaGTCAGGGATGGAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: VLPSAALTVGLLHDQLWIISGTT*SGMELS
Trigger: GGACAACTCCATCCCTGATCATGTTGTTCCTGAGAT...GATCCAAAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR TCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACATATACTCTTGGTCCATaGCAGGTCGCCGAGAATCAA +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTYTLGP*QVAENQ
Trigger: TTGATTCTCGGCGACCTGTCATGGACCAAGAGTATA...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGTGTGTTCCTGAGCTTTaGGACGTTCATGCCTTGCAC +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRRECVPEL*DVHALH
Trigger: GTGCAAGGCATGAACGTCTCAAAGCTCAGGAACACA...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCTGTCTGGGACCTGTCTaGTGTGTTAAAGGAGACTTG +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASCLGPV*CVKGDL
Trigger: CAAGTCTCCTTTAACACATCAGACAGGTCCCAGACA...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCATGTCTGGGACCTGTCTaGTGTGTTAAAGGAGACTTG +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPCLGPV*CVKGDL
Trigger: CAAGTCTCCTTTAACACATCAGACAGGTCCCAGACA...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGGGTTAAAAGGCCCGTaGAGTTCTGCCTTACAGTTT +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTGLKGP*SSALQF
Trigger: AAACTGTAAGGCAGAACTTCACGGGCCTTTTAACCC...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR GCA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCCCCTTCAATTTCCTCTaGAGAATGAACGCTGAGTTC +
Preference number: 4 (lower is better)
Translates to: HPDTEESQSAEGAWNPASPFNFL*RMNAEF
Trigger: GAACTCAGCGTTCATTCTGCAGAGGAAATTGAAGGG...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCAGCTTTGAGACGTTCATaGCTTGCACCTTCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPALRRS*LAPSLQ
Trigger: TTGAAGGGAAGGTGCAAGGCATGAACGTCTCAAAGC...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACGTGTTAAAGGAGACTTaGATAGGATCTACCGTCTGC +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHVLKET*IGSTVC
Trigger: GCAGACGGTAGATCCTATGCAAGTCTCCTTTAACAC...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp AAGGTGTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTTAGGCCCGTGAAGTTCTaGCTTACAGTTTGGAGTACC +
Preference number: 4 (lower is better)
Translates to: KVFFPLLLSRSACSMTSFRPVKF*LTVWST
Trigger: GGTACTCCAAACTGTAAGGCAGAACTTCACGGGCCT...AAAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCTGGCCCAAGACACTTaGATCCATTTGGTCCATCAC +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRRELAQDT*IHLVHH
Trigger: GTGATGGACCAAATGGATGCAAGTGTCTTGGGCCAG...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp AAGCTGCGCAACTCTCTCTGGCCCAAGACACTTGCATCCATTTGGTCCATCACAAGGTGTTCTTCCCTCTaGTGCTCTCACGGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: KLRNSLWPKTLASIWSITRCSSL*CSHGRP
Trigger: AGGCCGACCGTGAGAGCAGCAGAGGGAAGAACACCT...TGTGATGGACCAAATGGATGCAAGTGTCTTGGGCCAGAGAGAGTTGCGCAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp AGCAGCATCGTAGATCCAGTCGCATTGATGGAAAGGGAAGCTGCAACCAGCATTGGCCACCTGTGGACATaGTCAGGTGCCGAGCACAAC +
Preference number: 4 (lower is better)
Translates to: SSIVDPVALMEREAATSIGHLWT*SGAEHN
Trigger: GTTGTGCTCGGCACCTGAGCATGTCCACAGGTGGCC...AATGCTGGTTGCAGCTTCCCTTTCCATCAATGCGACTGGATCTACGATGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCATGGTTGGTTGGACACTaGGACACACATCAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPWLVGH*DTHQAL
Trigger: AAGAGCTTGATGTGTGTCGCAGTGTCCAACCAACCA...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR TCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCACGGCCTTTTCTCTaGTTACAGCTGGTTTTAGAA +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTARPFL*LQLVLE
Trigger: TTCTAAAACCAGCTGTAATCAGAGAAAAGGCCGTGC...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGATCTCAGGAACAACATaGTCAGGGATGGAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRREISGTT*SGMELS
Trigger: GGACAACTCCATCCCTGATCATGTTGTTCCTGAGAT...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCCATGTCCAAGGACTATaGGTTTACCAAGTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: HPDTEESQSAEGAWNPASHVQGL*VYQVAD
Trigger: ATCAGCAACTTGGTAAACTCATAGTCCTTGGACATG...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGTATACTCTTGGTCCATaGCAGGTCGCCGAGAATCAA +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRREYTLGP*QVAENQ
Trigger: TTGATTCTCGGCGACCTGTCATGGACCAAGAGTATA...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGGGGTTAAAAGGCCCGTaGAGTTCTGCCTTACAGTTT +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRREGLKGP*SSALQF
Trigger: AAACTGTAAGGCAGAACTTCACGGGCCTTTTAACCC...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR GCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAAAACACCAACACACTaGTTCGCTCCAACACAAACT +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHKTPTH*FAPTQT
Trigger: AGTTTGTGTTGGAGCGAAGCAGTGTGTTGGTGTTTT...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACTCACTTTCAAGATCGTaGTTCCTAATGGACAACGCA +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHSLSRS*FLMDNA
Trigger: TGCGTTGTCCATTAGGAAGCACGATCTTGAAAGTGA...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCTTAGTAGAAGGATGGTaGGCTCAATGTCACTCAGAC +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASLVEGW*AQCHSD
Trigger: GTCTGAGTGACATTGAGCGCACCATCCTTCTACTAA...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCATATCCATCGAGATGCTaGCGGAAAGGCATTGCAAAA +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPYPSRC*RKGIAK
Trigger: TTTTGCAATGCCTTTCCGGCAGCATCTCGATGGATA...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACCGCCGAGAATCAACATaGATGTTGAACTGTGAGATT +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHRREST*MLNCEI
Trigger: AATCTCACAGTTCAACATGCATGTTGATTCTCGGCG...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp AGAGAGGTTTCTCTCAGCAGCATCGTAGATCCAGTCGCATTGATGGAAAGGGAATTGTCTTGGGGTCCTTaGCAGCCAGCTCCCTCACCG +
Preference number: 4 (lower is better)
Translates to: REVSLSSIVDPVALMERELSWGP*QPAPSP
Trigger: CGGTGAGGGAGCTGGCTGGCAAGGACCCCAAGACAA...TTCCCTTTCCATCAATGCGACTGGATCTACGATGCTGCTGAGAGAAACCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACCCTTCAATTTCCTCTaGAGAATGAACGCTGAGTTC +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPPFNFL*RMNAEF
Trigger: GAACTCAGCGTTCATTCTGCAGAGGAAATTGAAGGG...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCAATAGGATCTACCGTCTaGTTCTGGAAGTCCACATTC +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPIGSTV*FWKSTF
Trigger: GAATGTGGACTTCCAGAAGCAGACGGTAGATCCTAT...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAATAGGATCTACCGTCTaGTTCTGGAAGTCCACATTC +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTIGSTV*FWKSTF
Trigger: GAATGTGGACTTCCAGAAGCAGACGGTAGATCCTAT...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCAGTGTTAAAGGAGACTTaGATAGGATCTACCGTCTGC +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPVLKET*IGSTVC
Trigger: GCAGACGGTAGATCCTATGCAAGTCTCCTTTAACAC...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAAAAATCAGCAAAAGGTaGCAGACAGACCAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTKISKR*QTDQVW
Trigger: CCAGACTTGGTCTGTCTGGCACCTTTTGCTGATTTT...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGCGTCACTCCAGTGCTTaGCACAAACAAGAGACTTTG +
Preference number: 4 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGRHSSA*HKQETL
Trigger: CAAAGTCTCTTGTTTGTGGCAAGCACTGGAGTGACG...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp AAGCTGCGCAACTCTCTCTGGCCCAAGACACTTGCATCCATTTGGTCCATCACAAGAGGAAAGTCAGTCTaGGGAGGGAGCCTGGAATCC +
Preference number: 4 (lower is better)
Translates to: KLRNSLWPKTLASIWSITRGKSV*GGSLES
Trigger: GGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCT...TGTGATGGACCAAATGGATGCAAGTGTCTTGGGCCAGAGAGAGTTGCGCAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCCACATCAAGCTCTTGTaGTTCGAGCTGTCTGTATTT +
Preference number: 4 (lower is better)
Translates to: HPDTEESQSAEGAWNPASHIKLL*FELSVF
Trigger: AAATACAGACAGCTCGAAGCACAAGAGCTTGATGTG...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR CCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACATACTCTTCAACTGAATaGGGCTTGCCTTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTYSSTE*GLPSTS
Trigger: TGAAGTGGAAGGCAAGCCCCATTCAGTTGAAGAGTA...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAACATGATCAGGGATaGAGTTGTCCCAGAAATCCT +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPQHDQG*SCPRNP
Trigger: AGGATTTCTGGGACAACTCCATCCCTGATCATGTTG...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCCCTTTAGTAGAAGGATaGTGCGCTCAATGTCACTCA +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASPLVEG*CAQCHS
Trigger: TGAGTGACATTGAGCGCACCATCCTTCTACTAAAGG...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCAGATCTGTAACTGTCTaGGACCTGTCTGATGTGTTA +
Preference number: 4 (lower is better)
Translates to: HPDTEESQSAEGAWNPASRSVTV*DLSDVL
Trigger: TAACACATCAGACAGGTCCCAGACAGTTACAGATCT...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGATCTGTAACTGTCTaGGACCTGTCTGATGTGTTA +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHRSVTV*DLSDVL
Trigger: TAACACATCAGACAGGTCCCAGACAGTTACAGATCT...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGCTCCATGACCAGCTTTaGATCAACCTGATTCCACTC +
Preference number: 4 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGLHDQL*INLIPL
Trigger: GAGTGGAATCAGGTTGATCCAAAGCTGGTCATGGAG...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCTTTATAAGTTGTCCCTaGGATGCATGTCACACTGCT +
Preference number: 4 (lower is better)
Translates to: HPDTEESQSAEGAWNPASFISCP*DACHTA
Trigger: AGCAGTGTGACATGCATCCCAGGGACAACTTATAAA...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR TCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGATAATACTCTTCAACTaGATGGGGCTTGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRREIILFN*MGLAFH
Trigger: GTGGAAGGCAAGCCCCATTCAGTTGAAGAGTATTAT...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCCATCAAACATCTGAATaGGAGAGACAGCAACTTCAT +
Preference number: 4 (lower is better)
Translates to: HPDTEESQSAEGAWNPASHQTSE*ERQQLH
Trigger: ATGAAGTTGCTGTCTCTCTCATTCAGATGTTTGATG...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCCATGTCCAAGGACTATaGGTTTACCAAGTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASHVQGL*VYQVAD
Trigger: ATCAGCAACTTGGTAAACTCATAGTCCTTGGACATG...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCCTCTGTTGGATTTCGTaGGAATTCCACAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASLCWIS*EFHKGF
Trigger: AAAGCCTTTGTGGAATTCTCACGAAATCCAACAGAG...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACACTCTGTTGGATTTCGTaGGAATTCCACAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTLCWIS*EFHKGF
Trigger: AAAGCCTTTGTGGAATTCTCACGAAATCCAACAGAG...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCCTGCAGAATGAACGCTaGGTTCAAGTGAAACTTTTA +
Preference number: 4 (lower is better)
Translates to: HPDTEESQSAEGAWNPASLQNER*VQVKLL
Trigger: TAAAAGTTTCACTTGAACTCAGCGTTCATTCTGCAG...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp GACGACATCCTCCACGCTGAATTGAACGTCAAACGCAAGCTCCATGTCGTGCTCTCACCCTTGTGTTCCTaGGCTTTGAGACGTTCATGC +
Preference number: 4 (lower is better)
Translates to: DDILHAELNVKRKLHVVLSPLCS*ALRRSC
Trigger: GCATGAACGTCTCAAAGCTCAGGAACACAAGGGTGA...GAGCACGACATGGAGCTTGCGTTTGACGTTCAATTCAGCGTGGAGGATGTCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR TCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCATGTCATGTTTTCTACTaGCTTGGAAAAGAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPCHVFY*LGKEAL
Trigger: AAGGGCCTCTTTTCCAAGTCAGTAGAAAACATGACA...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR TCA 90 bp GACGACATCCTCCACGCTGAATTGAACGTCAAACGCAAGCTCCATGTCGTGCTCCGACATCCTCCACGCTaGATTGAACGTCAAACGCAA +
Preference number: 4 (lower is better)
Translates to: DDILHAELNVKRKLHVVLRHPPR*IERQTQ
Trigger: TTGCGTTTGACGTTCAATTCAGCGTGGAGGATGTCG...GAGCACGACATGGAGCTTGCGTTTGACGTTCAATTCAGCGTGGAGGATGTCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR TCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCTCCCTTGGTTTTGACTaGCAGAACAAACCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASSLGFD*QNKPKS
Trigger: GCTTTTAGGTTTGTTCTGTCAGTCAAAACCAAGGGA...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCAAAACACCAACACACTaGTTCGCTCCAACACAAACT +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASKTPTH*FAPTQT
Trigger: AGTTTGTGTTGGAGCGAAGCAGTGTGTTGGTGTTTT...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCTGTGACAGAACTCTCTaGAATATTGGTGGACAGAAT +
Preference number: 4 (lower is better)
Translates to: HPDTEESQSAEGAWNPASCDRTL*NIGGQN
Trigger: ATTCTGTCCACCAATATTGCAGAGAGTTCTGTCACA...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGTTAGTAGAAGGATGGTaGGCTCAATGTCACTCAGAC +
Preference number: 4 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGLVEGW*AQCHSD
Trigger: GTCTGAGTGACATTGAGCGCACCATCCTTCTACTAA...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp GGCAATGTCTTGAAGCTGCGCAACTCTCTCTGGCCCAAGACACTTGCATCCATTTCTCTGCCCACTCACTaGAAGTGCTCCAACCTCCTT +
Preference number: 4 (lower is better)
Translates to: GNVLKLRNSLWPKTLASISLPTH*KCSNLL
Trigger: AAGGAGGTTGGAGCACTTGCAGTGAGTGGGCAGAGA...AATGGATGCAAGTGTCTTGGGCCAGAGAGAGTTGCGCAGCTTCAAGACATTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACGCCGAGAATCAACATaGATGTTGAACTGTGAGATT +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPRREST*MLNCEI
Trigger: AATCTCACAGTTCAACATGCATGTTGATTCTCGGCG...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCTTGTTCTTAAGAGTTTaGGGACTACCAATAGCAGGA +
Preference number: 4 (lower is better)
Translates to: HPDTEESQSAEGAWNPASLFLRV*GLPIAG
Trigger: TCCTGCTATTGGTAGTCCGCAAACTCTTAAGAACAA...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR CCA 90 bp GTGTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTTGGATATTTCACCCAGACCTaGCAAAAACACCAACACACT +
Preference number: 4 (lower is better)
Translates to: VFFPLLLSRSACSMTSFGYFTQT*QKHQHT
Trigger: AGTGTGTTGGTGTTTTTGCCAGGTCTGGGTGAAATA...TCCAAAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACATATTTCACCCAGACCTaGCAAAAACACCAACACACT +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTYFTQT*QKHQHT
Trigger: AGTGTGTTGGTGTTTTTGCCAGGTCTGGGTGAAATA...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCATATTTCACCCAGACCTaGCAAAAACACCAACACACT +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPYFTQT*QKHQHT
Trigger: AGTGTGTTGGTGTTTTTGCCAGGTCTGGGTGAAATA...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGCAACATGATCAGGGATaGAGTTGTCCCAGAAATCCT +
Preference number: 4 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGQHDQG*SCPRNP
Trigger: AGGATTTCTGGGACAACTCCATCCCTGATCATGTTG...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTTTAGTAGAAGGATaGTGCGCTCAATGTCACTCA +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRREPLVEG*CAQCHS
Trigger: TGAGTGACATTGAGCGCACCATCCTTCTACTAAAGG...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGTCAATTCACCATCATaGGGGTTTTCATCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTVNSPS*GFSSSL
Trigger: GAGAGAAGATGAAAACCCCCATGATGGTGAATTGAC...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACTTATATATATACTCTTaGTCCATGACAGGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHLYIYS*SMTGRR
Trigger: TCGGCGACCTGTCATGGACCAAGAGTATATATATAA...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCAGATCTGTAACTGTCTaGGACCTGTCTGATGTGTTA +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASRSVTV*DLSDVL
Trigger: TAACACATCAGACAGGTCCCAGACAGTTACAGATCT...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACGCTGGAGGCCACCTGTaGACATGCTCAGGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHAGGHL*TCSGAE
Trigger: CTCGGCACCTGAGCATGTCCACAGGTGGCCTCCAGC...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACATCAAACATCTGAATaGGAGAGACAGCAACTTCAT +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPHQTSE*ERQQLH
Trigger: ATGAAGTTGCTGTCTCTCTCATTCAGATGTTTGATG...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCTATGAACCAGGCTTGTaGGAAGTTCATGCATATAAT +
Preference number: 4 (lower is better)
Translates to: HPDTEESQSAEGAWNPASYEPGL*EVHAYN
Trigger: ATTATATGCATGAACTTCTCACAAGCCTGGTTCATA...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGCATGTCCAAGGACTATaGGTTTACCAAGTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGHVQGL*VYQVAD
Trigger: ATCAGCAACTTGGTAAACTCATAGTCCTTGGACATG...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp GTGTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTTGGAACAATGGATTTGACTTaGCCACACTGTCTAAAGAGA +
Preference number: 4 (lower is better)
Translates to: VFFPLLLSRSACSMTSFGTMDLT*PHCLKR
Trigger: TCTCTTTAGACAGTGTGGTCAAGTCAAATCCATTGT...TCCAAAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR TCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAACAATGGATTTGACTTaGCCACACTGTCTAAAGAGA +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTTMDLT*PHCLKR
Trigger: TCTCTTTAGACAGTGTGGTCAAGTCAAATCCATTGT...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCTCTGTTGGATTTCGTaGGAATTCCACAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRRELCWIS*EFHKGF
Trigger: AAAGCCTTTGTGGAATTCTCACGAAATCCAACAGAG...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACTGCAGAATGAACGCTaGGTTCAAGTGAAACTTTTA +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPLQNER*VQVKLL
Trigger: TAAAAGTTTCACTTGAACTCAGCGTTCATTCTGCAG...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACACTGCAGAATGAACGCTaGGTTCAAGTGAAACTTTTA +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTLQNER*VQVKLL
Trigger: TAAAAGTTTCACTTGAACTCAGCGTTCATTCTGCAG...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGATTTCCTCTGCAGAATaGACGCTGAGTTCAAGTGAA +
Preference number: 4 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGISSAE*TLSSSE
Trigger: TTCACTTGAACTCAGCGTTCATTCTGCAGAGGAAAT...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp AAAGGTGTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTTGTCATGTTTTCTACTaGCTTGGAAAAGAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: KGVLPSAALTVGLLHDQLCHVFY*LGKEAL
Trigger: AAGGGCCTCTTTTCCAAGTCAGTAGAAAACATGACA...AAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR TCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACACTAACAAAATCCGGATaGGATATTTCTCGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTLTKSG*DISRRL
Trigger: AAGACGACGAGAAATATCTCATCCGGATTTTGTTAG...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR TCA 90 bp GTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTTGGATCCAATCCAAACACACCTaGATTTGGATATTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: VLPSAALTVGLLHDQLWIQSKHT*IWIFWS
Trigger: TGACCAGAATATCCAAATTCAGGTGTGTTTGGATTG...GATCCAAAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR TCA 90 bp AGCTTGTTAATAGCAGCCCTGAGAATATTAACCTCGACGACATCCTCCACGCTGGGGAGGCCAGGGATATaGGGCATCAGAGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SLLIAALRILTSTTSSTLGRPGI*GIREVS
Trigger: AGAAACCTCTCTGATGCCTCATATCCCTGGCCTCCC...CAGCGTGGAGGATGTCGTCGAGGTTAATATTCTCAGGGCTGCTATTAACAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR TCA 90 bp AAAGGTGTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTTCCCTTGGTTTTGACTaGCAGAACAAACCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: KGVLPSAALTVGLLHDQLSLGFD*QNKPKS
Trigger: GCTTTTAGGTTTGTTCTGTCAGTCAAAACCAAGGGA...AAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR TCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAAAAAACACCACTCTCTaGCTATCACCCAAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTKNTTL*LSPKEK
Trigger: TTTCTCTTTGGGTGATAGTCAGAGAGTGGTGTTTTT...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAACTGAATGGGGCTTaGCTTCCACTTCAAAAATAT +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPQLNGA*LPLQKY
Trigger: ATATTTTTGAAGTGGAAGGCAAGCCCCATTCAGTTG...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGAAAACACCAACACACTaGTTCGCTCCAACACAAACT +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRREKTPTH*FAPTQT
Trigger: AGTTTGTGTTGGAGCGAAGCAGTGTGTTGGTGTTTT...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGTCACTTTCAAGATCGTaGTTCCTAATGGACAACGCA +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRRESLSRS*FLMDNA
Trigger: TGCGTTGTCCATTAGGAAGCACGATCTTGAAAGTGA...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACCCTTCACAAGGAGGGTaGAGCCGCTCACCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHPSQGG*SRSPER
Trigger: CCTCTCTGGTGAGCGGCTGCACCCTCCTTGTGAAGG...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAACATATTTGACATCTaGAACTGTGACAGAACTCTC +
Preference number: 4 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHNIFDI*NCDRTL
Trigger: GAGAGTTCTGTCACAGTTCCAGATGTCAAATATGTT...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CCTGATTCCACTCGTAGGGCTTTTCATGCCACTTGGGAACAATCTTCTCCCTTGCAGACAGACCAAGTCTaGATGTGGGTGAGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: PDSTRRAFHATWEQSSPLQTDQV*MWVSGQ
Trigger: TTGCCCACTCACCCACATCCAGACTTGGTCTGTCTG...CAAGGGAGAAGATTGTTCCCAAGTGGCATGAAAAGCCCTACGAGTGGAATCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
3UTR CAA 72 bp GAGAATATTAACCTCGACGACATCCTCCACGCTGAATaGAACGTCAAACGCAAGCTCCATGTCGTGCTCGGG +
Preference number: 4 (lower is better)
Translates to: ENINLDDILHAE*NVKRKLHVVLG
Trigger: CCCGAGCACGACATGGAGCTTGCGTTTGACGTTCAATTCAGCGTGGAGGATGTCGTCGAGGTTAATATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR TCA 90 bp AGCAGCATCGTAGATCCAGTCGCATTGATGGAAAGGGAAGCTGCAACCAGCATTTGTGTTCCTGAGCTTTaGGACGTTCATGCCTTGCAC +
Preference number: 4 (lower is better)
Translates to: SSIVDPVALMEREAATSICVPEL*DVHALH
Trigger: GTGCAAGGCATGAACGTCTCAAAGCTCAGGAACACA...AATGCTGGTTGCAGCTTCCCTTTCCATCAATGCGACTGGATCTACGATGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR TCA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGGGAAGTTCAAGAAATTaGCAGGGAATCTCCATCAAA +
Preference number: 4 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGGSSRN*QGISIK
Trigger: TTTGATGGAGATTCCCTGTCAATTTCTTGAACTTCC...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGGGAAGTTCAAGAAATTaGCAGGGAATCTCCATCAAA +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRREGSSRN*QGISIK
Trigger: TTTGATGGAGATTCCCTGTCAATTTCTTGAACTTCC...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAAACAAGAGACTTTGCTaGTGGTCTCATTTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTNKRLC*WSHFAN
Trigger: ATTTGCAAAATGAGACCATCAGCAAAGTCTCTTGTT...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCAACAAGAGACTTTGCTaGTGGTCTCATTTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASNKRLC*WSHFAN
Trigger: ATTTGCAAAATGAGACCATCAGCAAAGTCTCTTGTT...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACGGCATCCTGGACCCCTaGGTACTGGTACACATCCAC +
Preference number: 4 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHGILDP*VLVHIH
Trigger: GTGGATGTGTACCAGTACTCAGGGGTCCAGGATGCC...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp AAAGGTGTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTCTAACAAAATCCGGATaGGATATTTCTCGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: KGVLPSAALTVGLLHDQLLTKSG*DISRRL
Trigger: AAGACGACGAGAAATATCTCATCCGGATTTTGTTAG...AAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR TCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCAATCCAAACACACCTaGATTTGGATATTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRREQSKHT*IWIFWS
Trigger: TGACCAGAATATCCAAATTCAGGTGTGTTTGGATTG...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR TCA 90 bp AGAGAGGTTTCTCTCAGCAGCATCGTAGATCCAGTCGCATTGATGGAAAGGGAATCCTCCACGCTGAATTaGACGTCAAACGCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: REVSLSSIVDPVALMERESSTLN*TSNASS
Trigger: GGAGCTTGCGTTTGACGTTCAATTCAGCGTGGAGGA...TTCCCTTTCCATCAATGCGACTGGATCTACGATGCTGCTGAGAGAAACCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR TCA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACGGTCGGCCTGCTCCATaGCCAGCTTTGGATCAACCT +
Preference number: 4 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHGRPAP*PALDQP
Trigger: AGGTTGATCCAAAGCTGGTCATGGAGCAGGCCGACC...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAAAAACACCACTCTCTaGCTATCACCCAAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGKNTTL*LSPKEK
Trigger: TTTCTCTTTGGGTGATAGTCAGAGAGTGGTGTTTTT...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCAATACAGTCACTCTTaGTACTGCCAGAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRREQYSHS*YCQRNS
Trigger: TGAATTTCTCTGGCAGTAGCAAGAGTGACTGTATTG...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp GACGACATCCTCCACGCTGAATTGAACGTCAAACGCAAGCTCCATGTCGTGCTCATAGGATCTACCGTCTaGTTCTGGAAGTCCACATTC +
Preference number: 4 (lower is better)
Translates to: DDILHAELNVKRKLHVVLIGSTV*FWKSTF
Trigger: GAATGTGGACTTCCAGAAGCAGACGGTAGATCCTAT...GAGCACGACATGGAGCTTGCGTTTGACGTTCAATTCAGCGTGGAGGATGTCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp TGGACATGCTCAGGTGCCGAGCACAACCAGTTTGTGGAGCTGGTAGAGAAAGGTGTGTTAAAGGAGACTTaGATAGGATCTACCGTCTGC +
Preference number: 4 (lower is better)
Translates to: WTCSGAEHNQFVELVEKGVLKET*IGSTVC
Trigger: GCAGACGGTAGATCCTATGCAAGTCTCCTTTAACAC...ACCTTTCTCTACCAGCTCCACAAACTGGTTGTGCTCGGCACCTGAGCATGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp GACGACATCCTCCACGCTGAATTGAACGTCAAACGCAAGCTCCATGTCGTGCTCAAAATCAGCAAAAGGTaGCAGACAGACCAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: DDILHAELNVKRKLHVVLKISKR*QTDQVW
Trigger: CCAGACTTGGTCTGTCTGGCACCTTTTGCTGATTTT...GAGCACGACATGGAGCTTGCGTTTGACGTTCAATTCAGCGTGGAGGATGTCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp AGCAGCATCGTAGATCCAGTCGCATTGATGGAAAGGGAAGCTGCAACCAGCATTCTGGCCCAAGACACTTaGATCCATTTGGTCCATCAC +
Preference number: 4 (lower is better)
Translates to: SSIVDPVALMEREAATSILAQDT*IHLVHH
Trigger: GTGATGGACCAAATGGATGCAAGTGTCTTGGGCCAG...AATGCTGGTTGCAGCTTCCCTTTCCATCAATGCGACTGGATCTACGATGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACTGTTCTTCCCTCTGCTaGTCTCACGGTCGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHCSSLC*SHGRPA
Trigger: AGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACA...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCAACATATTTGACATCTaGAACTGTGACAGAACTCTC +
Preference number: 4 (lower is better)
Translates to: TEESQSAEGAWNPASTASNIFDI*NCDRTL
Trigger: GAGAGTTCTGTCACAGTTCCAGATGTCAAATATGTT...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGTTATATATATACTCTTaGTCCATGACAGGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRRELYIYS*SMTGRR
Trigger: TCGGCGACCTGTCATGGACCAAGAGTATATATATAA...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGTTCTGCCTTACAGTTTaGAGTACCCAGTTTATTGGT +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRREFCLTV*STQFIG
Trigger: ACCAATAAACTGGGTACTCCAAACTGTAAGGCAGAA...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR CCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAATTCTGGTCAAACTATaGCACTTAGTTCATAAGGGT +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTILVKL*HLVHKG
Trigger: ACCCTTATGAACTAAGTGCCATAGTTTGACCAGAAT...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CCA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACCCAGCAGCTCCACATTaGTCACCGTCTTGCCGATGG +
Preference number: 4 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHPAAPH*SPSCRW
Trigger: CCATCGGCAAGACGGTGACCAATGTGGAGCTGCTGG...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR TCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGAACAAGAGACTTTGCTaGTGGTCTCATTTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRRENKRLC*WSHFAN
Trigger: ATTTGCAAAATGAGACCATCAGCAAAGTCTCTTGTT...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACGGACGTCTCTTATGTTaGTGGCATCCTGGACCCCTG +
Preference number: 4 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHGRLLC*WHPGPL
Trigger: CAGGGGTCCAGGATGCCATCAACATAAGAGACGTCC...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp TCTGGCCCAAGACACTTGCATCCATTTGGTCCATCACAGACTAGCTTGTTAATAACCAGCATTCTCTGGTaGAGGTCTTCAGGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: SGPRHLHPFGPSQTSLLITSILW*RSSGAS
Trigger: TGACGCCCCTGAAGACCTTCACCAGAGAATGCTGGT...TATTAACAAGCTAGTCTGTGATGGACCAAATGGATGCAAGTGTCTTGGGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp TGCCGAGCACAACCAGTTTGTGGAGCTGGTAGAGAAAGGTGTTCTTCCCTCTGCTCACTTTCAAGATCGTaGTTCCTAATGGACAACGCA +
Preference number: 4 (lower is better)
Translates to: CRAQPVCGAGRERCSSLCSLSRS*FLMDNA
Trigger: TGCGTTGTCCATTAGGAAGCACGATCTTGAAAGTGA...GCAGAGGGAAGAACACCTTTCTCTACCAGCTCCACAAACTGGTTGTGCTCGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCTTCAAAGAAAGAGCTaGCGCTATAATAAGACATTC +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRRELQRKS*RYNKTF
Trigger: GAATGTCTTATTATAGCGGCAGCTCTTTCTTTGAAG...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGCTTCAAAGAAAGAGCTaGCGCTATAATAAGACATTC +
Preference number: 4 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGLQRKS*RYNKTF
Trigger: GAATGTCTTATTATAGCGGCAGCTCTTTCTTTGAAG...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CCTGATTCCACTCGTAGGGCTTTTCATGCCACTTGGGAACAATCTTCTCCCTTGCTATATCCATCGAGATaGTGCCGGAAAGGCATTGCA +
Preference number: 4 (lower is better)
Translates to: PDSTRRAFHATWEQSSPLLYPSR*CRKGIA
Trigger: TGCAATGCCTTTCCGGCAGCATCTCGATGGATATAG...CAAGGGAGAAGATTGTTCCCAAGTGGCATGAAAAGCCCTACGAGTGGAATCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACTTCCATGTTTTAAATaGCTCAACAAGTGCAATACA +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPLPCFK*LNKCNT
Trigger: TGTATTGCACTTGTTGAGGCATTTAAAACATGGAAG...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACACTTCCATGTTTTAAATaGCTCAACAAGTGCAATACA +
Preference number: 4 (lower is better)
Translates to: PDTEESQSAEGAWNPASTLPCFK*LNKCNT
Trigger: TGTATTGCACTTGTTGAGGCATTTAAAACATGGAAG...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp GACGACATCCTCCACGCTGAATTGAACGTCAAACGCAAGCTCCATGTCGTGCTCCGCCGAGAATCAACATaGATGTTGAACTGTGAGATT +
Preference number: 4 (lower is better)
Translates to: DDILHAELNVKRKLHVVLRREST*MLNCEI
Trigger: AATCTCACAGTTCAACATGCATGTTGATTCTCGGCG...GAGCACGACATGGAGCTTGCGTTTGACGTTCAATTCAGCGTGGAGGATGTCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCATGTAGGATGAATCGCTaGTTATATATATACTCTTGG +
Preference number: 4 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPCRMNR*LYIYSW
Trigger: CCAAGAGTATATATATAAGCAGCGATTCATCCTACA...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CCTGATTCCACTCGTAGGGCTTTTCATGCCACTTGGGAACAATCTTCTCCCTTGGAGACGTTCATGCCTTaGACCTTCCCTTCAATTTCC +
Preference number: 4 (lower is better)
Translates to: PDSTRRAFHATWEQSSPLETFMP*TFPSIS
Trigger: GGAAATTGAAGGGAAGGTGCAAGGCATGAACGTCTC...CAAGGGAGAAGATTGTTCCCAAGTGGCATGAAAAGCCCTACGAGTGGAATCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCTCCAGTATAGTACTTaGCATTCTGATCAATCCTTA +
Preference number: 4 (lower is better)
Translates to: VGTDCNTQTQRKVSLRRELQYST*HSDQSL
Trigger: TAAGGATTGATCAGAATGGCAAGTACTATACTGGAG...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR CCA 90 bp AAGCTGCGCAACTCTCTCTGGCCCAAGACACTTGCATCCATTTGGTCCATCACACCTTTAGTAGAAGGATaGTGCGCTCAATGTCACTCA +
Preference number: 4 (lower is better)
Translates to: KLRNSLWPKTLASIWSITPLVEG*CAQCHS
Trigger: TGAGTGACATTGAGCGCACCATCCTTCTACTAAAGG...TGTGATGGACCAAATGGATGCAAGTGTCTTGGGCCAGAGAGAGTTGCGCAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp TGGACATGCTCAGGTGCCGAGCACAACCAGTTTGTGGAGCTGGTAGAGAAAGGTTGTGACAGAACTCTCTaGAATATTGGTGGACAGAAT +
Preference number: 4 (lower is better)
Translates to: WTCSGAEHNQFVELVEKGCDRTL*NIGGQN
Trigger: ATTCTGTCCACCAATATTGCAGAGAGTTCTGTCACA...ACCTTTCTCTACCAGCTCCACAAACTGGTTGTGCTCGGCACCTGAGCATGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp AGCAGCATCGTAGATCCAGTCGCATTGATGGAAAGGGAAGCTGCAACCAGCATTTTAGTAGAAGGATGGTaGGCTCAATGTCACTCAGAC +
Preference number: 4 (lower is better)
Translates to: SSIVDPVALMEREAATSILVEGW*AQCHSD
Trigger: GTCTGAGTGACATTGAGCGCACCATCCTTCTACTAA...AATGCTGGTTGCAGCTTCCCTTTCCATCAATGCGACTGGATCTACGATGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp AGCAGCATCGTAGATCCAGTCGCATTGATGGAAAGGGAAGCTGCAACCAGCATTTATCCATCGAGATGCTaGCGGAAAGGCATTGCAAAA +
Preference number: 4 (lower is better)
Translates to: SSIVDPVALMEREAATSIYPSRC*RKGIAK
Trigger: TTTTGCAATGCCTTTCCGGCAGCATCTCGATGGATA...AATGCTGGTTGCAGCTTCCCTTTCCATCAATGCGACTGGATCTACGATGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp AAGGTGTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTTTGTAGGATGAATCGCTaGTTATATATATACTCTTGG +
Preference number: 4 (lower is better)
Translates to: KVFFPLLLSRSACSMTSFCRMNR*LYIYSW
Trigger: CCAAGAGTATATATATAAGCAGCGATTCATCCTACA...AAAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGTTGAGACATCTTAATTaGCATATATACTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGLRHLN*HIYCRK
Trigger: CTTCCTGCAGTATATATGGCAATTAAGATGTCTCAA...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp GGCAATGTCTTGAAGCTGCGCAACTCTCTCTGGCCCAAGACACTTGCATCCATTGTCAATTCACCATCATaGGGGTTTTCATCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GNVLKLRNSLWPKTLASIVNSPS*GFSSSL
Trigger: GAGAGAAGATGAAAACCCCCATGATGGTGAATTGAC...AATGGATGCAAGTGTCTTGGGCCAGAGAGAGTTGCGCAGCTTCAAGACATTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CCA 90 bp TGCCGAGCACAACCAGTTTGTGGAGCTGGTAGAGAAAGGTGTTCTTCCCTCTGCTTATATATATACTCTTaGTCCATGACAGGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: CRAQPVCGAGRERCSSLCLYIYS*SMTGRR
Trigger: TCGGCGACCTGTCATGGACCAAGAGTATATATATAA...GCAGAGGGAAGAACACCTTTCTCTACCAGCTCCACAAACTGGTTGTGCTCGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CCA 90 bp AGCTTGTTAATAGCAGCCCTGAGAATATTAACCTCGACGACATCCTCCACGCTGTCTACCGTCTGCTTCTaGAAGTCCACATTCACCCTT +
Preference number: 4 (lower is better)
Translates to: SLLIAALRILTSTTSSTLSTVCF*KSTFTL
Trigger: AAGGGTGAATGTGGACTTCCAGAAGCAGACGGTAGA...CAGCGTGGAGGATGTCGTCGAGGTTAATATTCTCAGGGCTGCTATTAACAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR TCA 90 bp AGCAGCATCGTAGATCCAGTCGCATTGATGGAAAGGGAAGCTGCAACCAGCATTATTTCCTCTGCAGAATaGACGCTGAGTTCAAGTGAA +
Preference number: 4 (lower is better)
Translates to: SSIVDPVALMEREAATSIISSAE*TLSSSE
Trigger: TTCACTTGAACTCAGCGTTCATTCTGCAGAGGAAAT...AATGCTGGTTGCAGCTTCCCTTTCCATCAATGCGACTGGATCTACGATGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR TCA 90 bp AAGCTGCGCAACTCTCTCTGGCCCAAGACACTTGCATCCATTTGGTCCATCACAGGAAGTTCAAGAAATTaGCAGGGAATCTCCATCAAA +
Preference number: 4 (lower is better)
Translates to: KLRNSLWPKTLASIWSITGSSRN*QGISIK
Trigger: TTTGATGGAGATTCCCTGTCAATTTCTTGAACTTCC...TGTGATGGACCAAATGGATGCAAGTGTCTTGGGCCAGAGAGAGTTGCGCAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp GGCAATGTCTTGAAGCTGCGCAACTCTCTCTGGCCCAAGACACTTGCATCCATTCAATACAGTCACTCTTaGTACTGCCAGAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: GNVLKLRNSLWPKTLASIQYSHS*YCQRNS
Trigger: TGAATTTCTCTGGCAGTAGCAAGAGTGACTGTATTG...AATGGATGCAAGTGTCTTGGGCCAGAGAGAGTTGCGCAGCTTCAAGACATTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR TCA 90 bp AGCAGCATCGTAGATCCAGTCGCATTGATGGAAAGGGAAGCTGCAACCAGCATTCATCAAACATCTGAATaGGAGAGACAGCAACTTCAT +
Preference number: 4 (lower is better)
Translates to: SSIVDPVALMEREAATSIHQTSE*ERQQLH
Trigger: ATGAAGTTGCTGTCTCTCTCATTCAGATGTTTGATG...AATGCTGGTTGCAGCTTCCCTTTCCATCAATGCGACTGGATCTACGATGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR TCA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACTATACTCTTGGTCCATaGCAGGTCGCCGAGAATCAA +
Preference number: 4 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHYTLGP*QVAENQ
Trigger: TTGATTCTCGGCGACCTGTCATGGACCAAGAGTATA...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
CDS-3UTR TCA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACTGGAAAAGAGGCCCTTaGGAACTTCATGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHWKRGP*ELHGFA
Trigger: AGCAAAGCCATGAAGTTCTCAAGGGCCTCTTTTCCA...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR GCA 90 bp CCTGATTCCACTCGTAGGGCTTTTCATGCCACTTGGGAACAATCTTCTCCCTTGCAACTGAATGGGGCTTaGCTTCCACTTCAAAAATAT +
Preference number: 4 (lower is better)
Translates to: PDSTRRAFHATWEQSSPLQLNGA*LPLQKY
Trigger: ATATTTTTGAAGTGGAAGGCAAGCCCCATTCAGTTG...CAAGGGAGAAGATTGTTCCCAAGTGGCATGAAAAGCCCTACGAGTGGAATCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp GACGACATCCTCCACGCTGAATTGAACGTCAAACGCAAGCTCCATGTCGTGCTCCTTCCATGTTTTAAATaGCTCAACAAGTGCAATACA +
Preference number: 4 (lower is better)
Translates to: DDILHAELNVKRKLHVVLLPCFK*LNKCNT
Trigger: TGTATTGCACTTGTTGAGGCATTTAAAACATGGAAG...GAGCACGACATGGAGCTTGCGTTTGACGTTCAATTCAGCGTGGAGGATGTCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACGAGACGTTCATGCCTTaGACCTTCCCTTCAATTTCC +
Preference number: 4 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHETFMP*TFPSIS
Trigger: GGAAATTGAAGGGAAGGTGCAAGGCATGAACGTCTC...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACCGTCACTCCAGTGCTTaGCACAAACAAGAGACTTTG +
Preference number: 4 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHRHSSA*HKQETL
Trigger: CAAAGTCTCTTGTTTGTGGCAAGCACTGGAGTGACG...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp GATCAACCTGATTCCACTCGTAGGGCTTTTCATGCCACTTGGGAACAATCTTCTCAACATGATCAGGGATaGAGTTGTCCCAGAAATCCT +
Preference number: 4 (lower is better)
Translates to: DQPDSTRRAFHATWEQSSQHDQG*SCPRNP
Trigger: AGGATTTCTGGGACAACTCCATCCCTGATCATGTTG...AGAAGATTGTTCCCAAGTGGCATGAAAAGCCCTACGAGTGGAATCAGGTTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CCA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACCTCCATGACCAGCTTTaGATCAACCTGATTCCACTC +
Preference number: 4 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHLHDQL*INLIPL
Trigger: GAGTGGAATCAGGTTGATCCAAAGCTGGTCATGGAG...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACACTTCTGAGCTCCTTTaGCTGAGTGACCTTTCGAAC +
Preference number: 4 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHTSELL*LSDLSN
Trigger: GTTCGAAAGGTCACTCAGCCAAAGGAGCTCAGAAGT...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR TCA 90 bp TCTGGCCCAAGACACTTGCATCCATTTGGTCCATCACAGACTAGCTTGTTAATAGCACGGCCTTTTCTCTaGTTACAGCTGGTTTTAGAA +
Preference number: 4 (lower is better)
Translates to: SGPRHLHPFGPSQTSLLIARPFL*LQLVLE
Trigger: TTCTAAAACCAGCTGTAATCAGAGAAAAGGCCGTGC...TATTAACAAGCTAGTCTGTGATGGACCAAATGGATGCAAGTGTCTTGGGCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp CCTGATTCCACTCGTAGGGCTTTTCATGCCACTTGGGAACAATCTTCTCCCTTGCTTCAAAGAAAGAGCTaGCGCTATAATAAGACATTC +
Preference number: 4 (lower is better)
Translates to: PDSTRRAFHATWEQSSPLLQRKS*RYNKTF
Trigger: GAATGTCTTATTATAGCGGCAGCTCTTTCTTTGAAG...CAAGGGAGAAGATTGTTCCCAAGTGGCATGAAAAGCCCTACGAGTGGAATCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACTATCCATCGAGATGCTaGCGGAAAGGCATTGCAAAA +
Preference number: 4 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHYPSRC*RKGIAK
Trigger: TTTTGCAATGCCTTTCCGGCAGCATCTCGATGGATA...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACAAAATCAGCAAAAGGTaGCAGACAGACCAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHKISKR*QTDQVW
Trigger: CCAGACTTGGTCTGTCTGGCACCTTTTGCTGATTTT...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CCA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACTACTCTTCAACTGAATaGGGCTTGCCTTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHYSSTE*GLPSTS
Trigger: TGAAGTGGAAGGCAAGCCCCATTCAGTTGAAGAGTA...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
3UTR CAA 72 bp AGACACTTGCATCCATTTGGTCCATCACAGACTAGCTaGTTAATAGCAGCCCTGAGAATATTAACCTCGACG +
Preference number: 4 (lower is better)
Translates to: RHLHPFGPSQTS*LIAALRILTST
Trigger: CGTCGAGGTTAATATTCTCAGGGCTGCTATTAACAAGCTAGTCTGTGATGGACCAAATGGATGCAAGTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp AGCAGCATCGTAGATCCAGTCGCATTGATGGAAAGGGAAGCTGCAACCAGCATTTTGAGACATCTTAATTaGCATATATACTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SSIVDPVALMEREAATSILRHLN*HIYCRK
Trigger: CTTCCTGCAGTATATATGGCAATTAAGATGTCTCAA...AATGCTGGTTGCAGCTTCCCTTTCCATCAATGCGACTGGATCTACGATGCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACTGTGACAGAACTCTCTaGAATATTGGTGGACAGAAT +
Preference number: 4 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHCDRTL*NIGGQN
Trigger: ATTCTGTCCACCAATATTGCAGAGAGTTCTGTCACA...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp GATCAACCTGATTCCACTCGTAGGGCTTTTCATGCCACTTGGGAACAATCTTCTCTCCAGTATAGTACTTaGCATTCTGATCAATCCTTA +
Preference number: 4 (lower is better)
Translates to: DQPDSTRRAFHATWEQSSLQYST*HSDQSL
Trigger: TAAGGATTGATCAGAATGGCAAGTACTATACTGGAG...AGAAGATTGTTCCCAAGTGGCATGAAAAGCCCTACGAGTGGAATCAGGTTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CCA 90 bp TCTGGCCCAAGACACTTGCATCCATTTGGTCCATCACAGACTAGCTTGTTAATATTCTGCCTTACAGTTTaGAGTACCCAGTTTATTGGT +
Preference number: 4 (lower is better)
Translates to: SGPRHLHPFGPSQTSLLIFCLTV*STQFIG
Trigger: ACCAATAAACTGGGTACTCCAAACTGTAAGGCAGAA...TATTAACAAGCTAGTCTGTGATGGACCAAATGGATGCAAGTGTCTTGGGCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR TCA 90 bp TCTGGCCCAAGACACTTGCATCCATTTGGTCCATCACAGACTAGCTTGTTAATATATGAACCAGGCTTGTaGGAAGTTCATGCATATAAT +
Preference number: 4 (lower is better)
Translates to: SGPRHLHPFGPSQTSLLIYEPGL*EVHAYN
Trigger: ATTATATGCATGAACTTCTCACAAGCCTGGTTCATA...TATTAACAAGCTAGTCTGTGATGGACCAAATGGATGCAAGTGTCTTGGGCCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR GCA 90 bp AACCACAAAGGACTCCAGTATAGTACTTGCCATTCTGATCAATCCTTAACTCTACCCTTCAATTTCCTCTaGAGAATGAACGCTGAGTTC +
Preference number: 4 (lower is better)
Translates to: NHKGLQYSTCHSDQSLTLPFNFL*RMNAEF
Trigger: GAACTCAGCGTTCATTCTGCAGAGGAAATTGAAGGG...TAGAGTTAAGGATTGATCAGAATGGCAAGTACTATACTGGAGTCCTTTGTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CCA 90 bp AACCACAAAGGACTCCAGTATAGTACTTGCCATTCTGATCAATCCTTAACTCTATACTCTTCAACTGAATaGGGCTTGCCTTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: NHKGLQYSTCHSDQSLTLYSSTE*GLPSTS
Trigger: TGAAGTGGAAGGCAAGCCCCATTCAGTTGAAGAGTA...TAGAGTTAAGGATTGATCAGAATGGCAAGTACTATACTGGAGTCCTTTGTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CCA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACAACATATTTGACATCTaGAACTGTGACAGAACTCTC +
Preference number: 4 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHNIFDI*NCDRTL
Trigger: GAGAGTTCTGTCACAGTTCCAGATGTCAAATATGTT...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACTGTAGGATGAATCGCTaGTTATATATATACTCTTGG +
Preference number: 4 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHCRMNR*LYIYSW
Trigger: CCAAGAGTATATATATAAGCAGCGATTCATCCTACA...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
CDS-3UTR GCA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACTTGAGACATCTTAATTaGCATATATACTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHLRHLN*HIYCRK
Trigger: CTTCCTGCAGTATATATGGCAATTAAGATGTCTCAA...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
CDS CCA 90 bp TGGCTGAGTGACCTTTCGAACGCAGCGGCCGGCCGGGCCGGAGCTTaGGCCAGAGCCGGAGCCTGGGCCGCGGGACCAGCGCCGGGGGCC +
Preference number: 5 (lower is better)
Translates to: WLSDLSNAAAGRAGA*ARAGAWAAGPAPGA
Trigger: GGCCCCCGGCGCTGGTCCCGCGGCCCAGGCTCCGGCTCTGGCCCAAGCTCCGGCCCGGCCGGCCGCTGCGTTCGAAAGGTCACTCAGCCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS TCA 90 bp CCTGGTAGCCCACCACACCTCCCAGGGTCCAGGCACGCTCTTTACTaGTCCACCTGGCGATGCTGCTTGCCCCTATCTTCCGGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: PGSPPHLPGSRHALY*STWRCCLPLSSGAG
Trigger: CCCAGCCCCGGAAGATAGGGGCAAGCAGCATCGCCAGGTGGATCAGTAAAGAGCGTGCCTGGACCCTGGGAGGTGTGGTGGGCTACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000554571.1
CDS GCA 90 bp CGTGCAGGACGCTGTGCACCACAGAGAAGACCTTCACAAGGAGGGTaGAGCCGCTCACCAGAGAGGCGAACCACTGGCTGGCCCCGTCAC +
Preference number: 5 (lower is better)
Translates to: RAGRCAPQRRPSQGG*SRSPERRTTGWPRH
Trigger: GTGACGGGGCCAGCCAGTGGTTCGCCTCTCTGGTGAGCGGCTGCACCCTCCTTGTGAAGGTCTTCTCTGTGGTGCACAGCGTCCTGCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCACCTGGCGATGCTGCTaGCCCCTATCTTCCGGGGCT +
Preference number: 5 (lower is better)
Translates to: TEESQSAEGAWNPASTASTWRCC*PLSSGA
Trigger: AGCCCCGGAAGATAGGGGCAAGCAGCATCGCCAGGT...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS GCA 90 bp TCCTGGACCCCTGAGTACTGGTACACATCCACGTGCAGGACGCTGTaGACCACAGAGAAGACCTTCACAAGGAGGGTGCAGCCGCTCACC +
Preference number: 5 (lower is better)
Translates to: SWTPEYWYTSTCRTL*TTEKTFTRRVQPLT
Trigger: GGTGAGCGGCTGCACCCTCCTTGTGAAGGTCTTCTCTGTGGTGCACAGCGTCCTGCACGTGGATGTGTACCAGTACTCAGGGGTCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS CCA 90 bp TCACAAGGAGGGTGCAGCCGCTCACCAGAGAGGCGAACCACTGGCTaGCCCCGTCACTCCAGTGCTTGCCACAAACAAGAGACTTTGCTG +
Preference number: 5 (lower is better)
Translates to: SQGGCSRSPERRTTG*PRHSSACHKQETLL
Trigger: CAGCAAAGTCTCTTGTTTGTGGCAAGCACTGGAGTGACGGGGCCAGCCAGTGGTTCGCCTCTCTGGTGAGCGGCTGCACCCTCCTTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACGCCCCCGACCAAGCCTaGTTCCCACTCTCCTTCATA +
Preference number: 5 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHAPDQA*FPLSFI
Trigger: TATGAAGGAGAGTGGGAACAAGGCTTGGTCGGGGGC...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCAACACGACAGTTGTCTaGGGGTCCTTGCCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: HPDTEESQSAEGAWNPASNTTVV*GSLPAS
Trigger: GCTGGCTGGCAAGGACCCCAAGACAACTGTCGTGTT...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACACCCAGCAGCTCCACATaGGTCACCGTCTTGCCGATG +
Preference number: 5 (lower is better)
Translates to: PDTEESQSAEGAWNPASTPSSST*VTVLPM
Trigger: CATCGGCAAGACGGTGACCAATGTGGAGCTGCTGGG...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR CAA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACTGGCCCACTGGTTGGTaGGACACTGCGACACACATC +
Preference number: 5 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHWPTGW*DTATHI
Trigger: GATGTGTGTCGCAGTGTCCAACCAACCAGTGGGCCA...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS GCA 90 bp TCCACATTGGTCACCGTCTTGCCGATGGTGAACCAGTCGTTGATCTaGTCGATGGTGAGCTTCCGCAGCATCCTCAAGGCCCAGGCGTCG +
Preference number: 5 (lower is better)
Translates to: STLVTVLPMVNQSLI*SMVSFRSILKAQAS
Trigger: CGACGCCTGGGCCTTGAGGATGCTGCGGAAGCTCACCATCGAGCAGATCAACGACTGGTTCACCATCGGCAAGACGGTGACCAATGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS CCA 90 bp ACCTTCACAAGGAGGGTGCAGCCGCTCACCAGAGAGGCGAACCACTaGCTGGCCCCGTCACTCCAGTGCTTGCCACAAACAAGAGACTTT +
Preference number: 5 (lower is better)
Translates to: TFTRRVQPLTREANH*LAPSLQCLPQTRDF
Trigger: AAAGTCTCTTGTTTGTGGCAAGCACTGGAGTGACGGGGCCAGCCAGTGGTTCGCCTCTCTGGTGAGCGGCTGCACCCTCCTTGTGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCCCCCGACCAAGCCTaGTTCCCACTCTCCTTCATA +
Preference number: 5 (lower is better)
Translates to: PDTEESQSAEGAWNPASTAPDQA*FPLSFI
Trigger: TATGAAGGAGAGTGGGAACAAGGCTTGGTCGGGGGC...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCAAACACGACAGTTGTCTaGGGGTCCTTGCCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPNTTVV*GSLPAS
Trigger: GCTGGCTGGCAAGGACCCCAAGACAACTGTCGTGTT...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGGACCTGGCCCACTGGTaGGTTGGACACTGCGACACA +
Preference number: 5 (lower is better)
Translates to: VGTDCNTQTQRKVSLRREDLAHW*VGHCDT
Trigger: TGTGTCGCAGTGTCCAACCAACCAGTGGGCCAGGTC...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR CAA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCAGGACGTCTCTTATGTaGATGGCATCCTGGACCCCT +
Preference number: 5 (lower is better)
Translates to: HPDTEESQSAEGAWNPASRTSLM*MASWTP
Trigger: AGGGGTCCAGGATGCCATCAACATAAGAGACGTCCT...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACACTGACGGGCAATGTCTaGAAGCTGCGCAACTCTCTC +
Preference number: 5 (lower is better)
Translates to: PDTEESQSAEGAWNPASTLTGNV*KLRNSL
Trigger: GAGAGAGTTGCGCAGCTTCAAGACATTGCCCGTCAG...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS GCA 90 bp CATAGGGAGGAATGTGTTTCAACACGACAGTTGTCTTGGGGTCCTTaGCAGCCAGCTCCCTCACCGCCATCTCCTCATCCGGCTGTCCAA +
Preference number: 5 (lower is better)
Translates to: HREECVSTRQLSWGP*QPAPSPPSPHPAVQ
Trigger: TTGGACAGCCGGATGAGGAGATGGCGGTGAGGGAGCTGGCTGGCAAGGACCCCAAGACAACTGTCGTGTTGAAACACATTCCTCCCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCGTTTCAACACGACAGTaGTCTTGGGGTCCTTGCCAG +
Preference number: 5 (lower is better)
Translates to: TEESQSAEGAWNPASTASVSTRQ*SWGPCQ
Trigger: CTGGCAAGGACCCCAAGACAACTGTCGTGTTGAAAC...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCAGGACGTCTCTTATGTaGATGGCATCCTGGACCCCT +
Preference number: 5 (lower is better)
Translates to: TEESQSAEGAWNPASTASRTSLM*MASWTP
Trigger: AGGGGTCCAGGATGCCATCAACATAAGAGACGTCCT...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGCTGACGGGCAATGTCTaGAAGCTGCGCAACTCTCTC +
Preference number: 5 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGLTGNV*KLRNSL
Trigger: GAGAGAGTTGCGCAGCTTCAAGACATTGCCCGTCAG...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS TCA 90 bp CTGCTGGATGAGGACGTCTCTTATGTTGATGGCATCCTGGACCCCTaGGTACTGGTACACATCCACGTGCAGGACGCTGTGCACCACAGA +
Preference number: 5 (lower is better)
Translates to: LLDEDVSYVDGILDP*VLVHIHVQDAVHHR
Trigger: TCTGTGGTGCACAGCGTCCTGCACGTGGATGTGTACCAGTACTCAGGGGTCCAGGATGCCATCAACATAAGAGACGTCCTCATCCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS GCA 90 bp CCGCTCACCAGAGAGGCGAACCACTGGCTGGCCCCGTCACTCCAGTaGTTGCCACAAACAAGAGACTTTGCTGATGGTCTCATTTTGCAA +
Preference number: 5 (lower is better)
Translates to: PLTREANHWLAPSLQ*LPQTRDFADGLILQ
Trigger: TTGCAAAATGAGACCATCAGCAAAGTCTCTTGTTTGTGGCAAGCACTGGAGTGACGGGGCCAGCCAGTGGTTCGCCTCTCTGGTGAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS GCA 90 bp ATGTTGATGGCATCCTGGACCCCTGAGTACTGGTACACATCCACGTaGAGGACGCTGTGCACCACAGAGAAGACCTTCACAAGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: MLMASWTPEYWYTST*RTLCTTEKTFTRRV
Trigger: CACCCTCCTTGTGAAGGTCTTCTCTGTGGTGCACAGCGTCCTGCACGTGGATGTGTACCAGTACTCAGGGGTCCAGGATGCCATCAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGGTTTCAACACGACAGTaGTCTTGGGGTCCTTGCCAG +
Preference number: 5 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGVSTRQ*SWGPCQ
Trigger: CTGGCAAGGACCCCAAGACAACTGTCGTGTTGAAAC...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACCGTCACTCCAGTGCTaGCCACAAACAAGAGACTTT +
Preference number: 5 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPPSLQC*PQTRDF
Trigger: AAAGTCTCTTGTTTGTGGCAAGCACTGGAGTGACGG...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCAATCCTCCACGCTGAATaGAACGTCAAACGCAAGCTC +
Preference number: 5 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPILHAE*NVKRKL
Trigger: GAGCTTGCGTTTGACGTTCAATTCAGCGTGGAGGAT...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR CAA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAATCCTCCACGCTGAATaGAACGTCAAACGCAAGCTC +
Preference number: 5 (lower is better)
Translates to: PDTEESQSAEGAWNPASTILHAE*NVKRKL
Trigger: GAGCTTGCGTTTGACGTTCAATTCAGCGTGGAGGAT...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR CAA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCGACACTTGCATCCATTaGGTCCATCACAGACTAGCT +
Preference number: 5 (lower is better)
Translates to: HPDTEESQSAEGAWNPASDTCIH*VHHRLA
Trigger: AGCTAGTCTGTGATGGACCAAATGGATGCAAGTGTC...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACGACACTTGCATCCATTaGGTCCATCACAGACTAGCT +
Preference number: 5 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHDTCIH*VHHRLA
Trigger: AGCTAGTCTGTGATGGACCAAATGGATGCAAGTGTC...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCTCTGGCCCAAGACACTaGCATCCATTTGGTCCATCA +
Preference number: 5 (lower is better)
Translates to: TEESQSAEGAWNPASTASSGPRH*HPFGPS
Trigger: TGATGGACCAAATGGATGCAAGTGTCTTGGGCCAGA...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCATCTGGCCCAAGACACTaGCATCCATTTGGTCCATCA +
Preference number: 5 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPSGPRH*HPFGPS
Trigger: TGATGGACCAAATGGATGCAAGTGTCTTGGGCCAGA...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCGGCTTTTCATGCCACTaGGGAACAATCTTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: HPDTEESQSAEGAWNPASGFSCH*GTIFSL
Trigger: AAGGGAGAAGATTGTTCCCAAGTGGCATGAAAAGCC...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACACACATCAAGCTCTaGTGCTTCGAGCTGTCTGTA +
Preference number: 5 (lower is better)
Translates to: HPDTEESQSAEGAWNPASTHIKL*CFELSV
Trigger: TACAGACAGCTCGAAGCACAAGAGCTTGATGTGTGT...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS CCA 90 bp ATGAGGACGTCTCTTATGTTGATGGCATCCTGGACCCCTGAGTACTaGTACACATCCACGTGCAGGACGCTGTGCACCACAGAGAAGACC +
Preference number: 5 (lower is better)
Translates to: MRTSLMLMASWTPEY*YTSTCRTLCTTEKT
Trigger: GGTCTTCTCTGTGGTGCACAGCGTCCTGCACGTGGATGTGTACCAGTACTCAGGGGTCCAGGATGCCATCAACATAAGAGACGTCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS CCA 90 bp TCGAGCTGTCTGTATTTGTTAATATACTCTACTTCTGAGCTCCTTTaGCTGAGTGACCTTTCGAACGCAGCGGCCGGCCGGGCCGGAGCT +
Preference number: 5 (lower is better)
Translates to: SSCLYLLIYSTSELL*LSDLSNAAAGRAGA
Trigger: AGCTCCGGCCCGGCCGGCCGCTGCGTTCGAAAGGTCACTCAGCCAAAGGAGCTCAGAAGTAGAGTATATTAACAAATACAGACAGCTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR CAA 90 bp GGCAATGTCTTGAAGCTGCGCAACTCTCTCTGGCCCAAGACACTTGCATCCATTGCCCCCGACCAAGCCTaGTTCCCACTCTCCTTCATA +
Preference number: 5 (lower is better)
Translates to: GNVLKLRNSLWPKTLASIAPDQA*FPLSFI
Trigger: TATGAAGGAGAGTGGGAACAAGGCTTGGTCGGGGGC...AATGGATGCAAGTGTCTTGGGCCAGAGAGAGTTGCGCAGCTTCAAGACATTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CAA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACGCAATACAGTCACTCTaGCTACTGCCAGAGAAATTC +
Preference number: 5 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHAIQSL*LLPEKF
Trigger: GAATTTCTCTGGCAGTAGCAAGAGTGACTGTATTGC...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCCTTATATATATACTCTaGGTCCATGACAGGTCGCCG +
Preference number: 5 (lower is better)
Translates to: HPDTEESQSAEGAWNPASLIYIL*VHDRSP
Trigger: CGGCGACCTGTCATGGACCAAGAGTATATATATAAG...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp GGCAATGTCTTGAAGCTGCGCAACTCTCTCTGGCCCAAGACACTTGCATCCATTAACACGACAGTTGTCTaGGGGTCCTTGCCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: GNVLKLRNSLWPKTLASINTTVV*GSLPAS
Trigger: GCTGGCTGGCAAGGACCCCAAGACAACTGTCGTGTT...AATGGATGCAAGTGTCTTGGGCCAGAGAGAGTTGCGCAGCTTCAAGACATTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CAA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCTGTGTTAAAGGAGACTaGCATAGGATCTACCGTCTG +
Preference number: 5 (lower is better)
Translates to: HPDTEESQSAEGAWNPASCVKGD*HRIYRL
Trigger: CAGACGGTAGATCCTATGCAAGTCTCCTTTAACACA...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACACCAGCGTCAGTTGGTaGATTTCAGCAGTAAGCTTT +
Preference number: 5 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHTSVSW*ISAVSF
Trigger: AAAGCTTACTGCTGAAATCAACCAACTGACGCTGGT...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp AAGGTGTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTTGTAGATCCAGTCGCATaGATGGAAAGGGAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: KVFFPLLLSRSACSMTSFVDPVA*MEREAA
Trigger: TGCAGCTTCCCTTTCCATCAATGCGACTGGATCTAC...AAAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CAA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGGTAGATCCAGTCGCATaGATGGAAAGGGAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: VGTDCNTQTQRKVSLRREVDPVA*MEREAA
Trigger: TGCAGCTTCCCTTTCCATCAATGCGACTGGATCTAC...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR CAA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACACCATCACAGACTAGCTaGTTAATAGCAGCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: PDTEESQSAEGAWNPASTPSQTS*LIAALR
Trigger: TCTCAGGGCTGCTATTAACAAGCTAGTCTGTGATGG...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCCCATCACAGACTAGCTaGTTAATAGCAGCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: TEESQSAEGAWNPASTASPSQTS*LIAALR
Trigger: TCTCAGGGCTGCTATTAACAAGCTAGTCTGTGATGG...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGGCTTTTCATGCCACTaGGGAACAATCTTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: PDTEESQSAEGAWNPASTGFSCH*GTIFSL
Trigger: AAGGGAGAAGATTGTTCCCAAGTGGCATGAAAAGCC...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS CCA 90 bp AGACCTGGCAAAAACACCAACACACTGCTTCGCTCCAACACAAACTaGGCCCCCGACCAAGCCTTGTTCCCACTCTCCTTCATATCCAAG +
Preference number: 5 (lower is better)
Translates to: RPGKNTNTLLRSNTN*APDQALFPLSFISK
Trigger: CTTGGATATGAAGGAGAGTGGGAACAAGGCTTGGTCGGGGGCCCAGTTTGTGTTGGAGCGAAGCAGTGTGTTGGTGTTTTTGCCAGGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACACTTCTAAAGCCACACTaGAATGGAGTGGATAGACCT +
Preference number: 5 (lower is better)
Translates to: PDTEESQSAEGAWNPASTLLKPH*NGVDRP
Trigger: AGGTCTATCCACTCCATTCAAGTGTGGCTTTAGAAG...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCCTTCTAAAGCCACACTaGAATGGAGTGGATAGACCT +
Preference number: 5 (lower is better)
Translates to: TEESQSAEGAWNPASTASLLKPH*NGVDRP
Trigger: AGGTCTATCCACTCCATTCAAGTGTGGCTTTAGAAG...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp GTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTTGGATCGCAATACAGTCACTCTaGCTACTGCCAGAGAAATTC +
Preference number: 5 (lower is better)
Translates to: VLPSAALTVGLLHDQLWIAIQSL*LLPEKF
Trigger: GAATTTCTCTGGCAGTAGCAAGAGTGACTGTATTGC...GATCCAAAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CAA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCAGCAATACAGTCACTCTaGCTACTGCCAGAGAAATTC +
Preference number: 5 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPAIQSL*LLPEKF
Trigger: GAATTTCTCTGGCAGTAGCAAGAGTGACTGTATTGC...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp TGGACATGCTCAGGTGCCGAGCACAACCAGTTTGTGGAGCTGGTAGAGAAAGGTGTTTCAACACGACAGTaGTCTTGGGGTCCTTGCCAG +
Preference number: 5 (lower is better)
Translates to: WTCSGAEHNQFVELVEKGVSTRQ*SWGPCQ
Trigger: CTGGCAAGGACCCCAAGACAACTGTCGTGTTGAAAC...ACCTTTCTCTACCAGCTCCACAAACTGGTTGTGCTCGGCACCTGAGCATGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CAA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCAACCAGCGTCAGTTGGTaGATTTCAGCAGTAAGCTTT +
Preference number: 5 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPTSVSW*ISAVSF
Trigger: AAAGCTTACTGCTGAAATCAACCAACTGACGCTGGT...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCCACAAACAAGAGACTTaGCTGATGGTCTCATTTTGC +
Preference number: 5 (lower is better)
Translates to: HPDTEESQSAEGAWNPASHKQET*LMVSFC
Trigger: GCAAAATGAGACCATCAGCAAAGTCTCTTGTTTGTG...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp TGCCGAGCACAACCAGTTTGTGGAGCTGGTAGAGAAAGGTGTTCTTCCCTCTGCAGGACGTCTCTTATGTaGATGGCATCCTGGACCCCT +
Preference number: 5 (lower is better)
Translates to: CRAQPVCGAGRERCSSLCRTSLM*MASWTP
Trigger: AGGGGTCCAGGATGCCATCAACATAAGAGACGTCCT...GCAGAGGGAAGAACACCTTTCTCTACCAGCTCCACAAACTGGTTGTGCTCGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CAA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCATCACAGACTAGCTaGTTAATAGCAGCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: VGTDCNTQTQRKVSLRREPSQTS*LIAALR
Trigger: TCTCAGGGCTGCTATTAACAAGCTAGTCTGTGATGG...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACGAACAATCTTCTCCCTaGGTTTTGACTGACAGAACA +
Preference number: 5 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHEQSSP*VLTDRT
Trigger: TGTTCTGTCAGTCAAAACCAAGGGAGAAGATTGTTC...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACTTTGTTCTTAAGAGTTaGCGGACTACCAATAGCAGG +
Preference number: 5 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHFVLKS*RTTNSR
Trigger: CCTGCTATTGGTAGTCCGCAAACTCTTAAGAACAAA...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS GCA 90 bp TCACCAGAGAGGCGAACCACTGGCTGGCCCCGTCACTCCAGTGCTTaGCACAAACAAGAGACTTTGCTGATGGTCTCATTTTGCAAATCT +
Preference number: 5 (lower is better)
Translates to: SPERRTTGWPRHSSA*HKQETLLMVSFCKS
Trigger: AGATTTGCAAAATGAGACCATCAGCAAAGTCTCTTGTTTGTGGCAAGCACTGGAGTGACGGGGCCAGCCAGTGGTTCGCCTCTCTGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp GTGTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTTGGATCAACTGAATGGGGCTaGCCTTCCACTTCAAAAATA +
Preference number: 5 (lower is better)
Translates to: VFFPLLLSRSACSMTSFGSTEWG*PSTSKI
Trigger: TATTTTTGAAGTGGAAGGCAAGCCCCATTCAGTTGA...TCCAAAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CAA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACCCAGAGAAATTCACTTaGTTCCTATATCCATCGAGA +
Preference number: 5 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHPEKFT*FLYPSR
Trigger: TCTCGATGGATATAGGAACAAAGTGAATTTCTCTGG...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCGAATCAACATGCATGTaGAACTGTGAGATTCTAGTC +
Preference number: 5 (lower is better)
Translates to: HPDTEESQSAEGAWNPASESTCM*NCEILV
Trigger: GACTAGAATCTCACAGTTCAACATGCATGTTGATTC...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGCTTATATATATACTCTaGGTCCATGACAGGTCGCCG +
Preference number: 5 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGLIYIL*VHDRSP
Trigger: CGGCGACCTGTCATGGACCAAGAGTATATATATAAG...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCTACAATGGATTTGACTaGACCACACTGTCTAAAGAG +
Preference number: 5 (lower is better)
Translates to: HPDTEESQSAEGAWNPASYNGFD*TTLSKE
Trigger: CTCTTTAGACAGTGTGGTCAAGTCAAATCCATTGTA...GGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp AAGGTGTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTTTGTGTTAAAGGAGACTaGCATAGGATCTACCGTCTG +
Preference number: 5 (lower is better)
Translates to: KVFFPLLLSRSACSMTSFCVKGD*HRIYRL
Trigger: CAGACGGTAGATCCTATGCAAGTCTCCTTTAACACA...AAAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CAA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGTGTGTTAAAGGAGACTaGCATAGGATCTACCGTCTG +
Preference number: 5 (lower is better)
Translates to: VGTDCNTQTQRKVSLRRECVKGD*HRIYRL
Trigger: CAGACGGTAGATCCTATGCAAGTCTCCTTTAACACA...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACACAAACAAGAGACTTaGCTGATGGTCTCATTTTGC +
Preference number: 5 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPHKQET*LMVSFC
Trigger: GCAAAATGAGACCATCAGCAAAGTCTCTTGTTTGTG...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCAATGTTTTCTACTGACTaGGAAAAGAGGCCCTTGAGA +
Preference number: 5 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPMFSTD*EKRPLR
Trigger: TCTCAAGGGCCTCTTTTCCAAGTCAGTAGAAAACAT...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR CAA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAATGTTTTCTACTGACTaGGAAAAGAGGCCCTTGAGA +
Preference number: 5 (lower is better)
Translates to: PDTEESQSAEGAWNPASTMFSTD*EKRPLR
Trigger: TCTCAAGGGCCTCTTTTCCAAGTCAGTAGAAAACAT...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR CAA 90 bp AAAGGTGTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTGTTCTGCCTTACAGTTaGGAGTACCCAGTTTATTGG +
Preference number: 5 (lower is better)
Translates to: KGVLPSAALTVGLLHDQLVLPYS*EYPVYW
Trigger: CCAATAAACTGGGTACTCCAAACTGTAAGGCAGAAC...AAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACACCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CAA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGGAAGCAGGACTCCAGTaGTCATATAAATTAGCCTGG +
Preference number: 5 (lower is better)
Translates to: VGTDCNTQTQRKVSLRREEAGLQ*SYKLAW
Trigger: CCAGGCTAATTTATATGACAACTGGAGTCCTGCTTC...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS TCA 90 bp TCAAAATCAGCAAAAGGTGCCAGACAGACCAAGTCTGGATGTGGGTaGGTGGGCAAGGGCACCAGCGTCAGTTGGTTGATTTCAGCAGTA +
Preference number: 5 (lower is better)
Translates to: SKSAKGARQTKSGCG*VGKGTSVSWLISAV
Trigger: TACTGCTGAAATCAACCAACTGACGCTGGTGCCCTTGCCCACTCACCCACATCCAGACTTGGTCTGTCTGGCACCTTTTGCTGATTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGTCAACTGAATGGGGCTaGCCTTCCACTTCAAAAATA +
Preference number: 5 (lower is better)
Translates to: VGTDCNTQTQRKVSLRRESTEWG*PSTSKI
Trigger: TATTTTTGAAGTGGAAGGCAAGCCCCATTCAGTTGA...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCAGCAGACTCTGATAATTaGTATCTTCATCACAGACCA +
Preference number: 5 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPADSDN*YLHHRP
Trigger: TGGTCTGTGATGAAGATACAAATTATCAGAGTCTGC...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCTACAATGGATTTGACTaGACCACACTGTCTAAAGAG +
Preference number: 5 (lower is better)
Translates to: TEESQSAEGAWNPASTASYNGFD*TTLSKE
Trigger: CTCTTTAGACAGTGTGGTCAAGTCAAATCCATTGTA...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CTCCATGTCGTGCTCGGGCAGTATGGAAGCCCCTGTAGCTGGATTCCACCCCAAATTCCACAAAGGCTTTaGCACCATCAAATACAATGG +
Preference number: 5 (lower is better)
Translates to: LHVVLGQYGSPCSWIPPQIPQRL*HHQIQW
Trigger: CCATTGTATTTGATGGTGCAAAAGCCTTTGTGGAAT...TTGGGGTGGAATCCAGCTACAGGGGCTTCCATACTGCCCGAGCACGACATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CAA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAATTCCACAAAGGCTTTaGCACCATCAAATACAATGG +
Preference number: 5 (lower is better)
Translates to: PDTEESQSAEGAWNPASTIPQRL*HHQIQW
Trigger: CCATTGTATTTGATGGTGCAAAAGCCTTTGTGGAAT...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGCTGATAATGACAGAGTaGATGCTCTCCTTCTCAATC +
Preference number: 5 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGLIMTE*MLSFSI
Trigger: GATTGAGAAGGAGAGCATCAACTCTGTCATTATCAG...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR CAA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGGAACAATCTTCTCCCTaGGTTTTGACTGACAGAACA +
Preference number: 5 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGEQSSP*VLTDRT
Trigger: TGTTCTGTCAGTCAAAACCAAGGGAGAAGATTGTTC...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp TGGACATGCTCAGGTGCCGAGCACAACCAGTTTGTGGAGCTGGTAGAGAAAGGTGGCTTTTCATGCCACTaGGGAACAATCTTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: WTCSGAEHNQFVELVEKGGFSCH*GTIFSL
Trigger: AAGGGAGAAGATTGTTCCCAAGTGGCATGAAAAGCC...ACCTTTCTCTACCAGCTCCACAAACTGGTTGTGCTCGGCACCTGAGCATGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CAA 90 bp CCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACTCACAAAACGTGAATTaGTTCTTAAGAGTTTGCGGA +
Preference number: 5 (lower is better)
Translates to: PRHRGKSVCGGSLESSLHSQNVN*FLRVCG
Trigger: TCCGCAAACTCTTAAGAACAAATTCACGTTTTGTGA...GTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR CAA 90 bp GTGTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTTGGAAGGATTCATCTTGTTTaGAACAGGAACAGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: VFFPLLLSRSACSMTSFGRIHLV*NRNSKV
Trigger: TACTTTGCTGTTCCTGTTCAAAACAAGATGAATCCT...TCCAAAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CAA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAAGGATTCATCTTGTTTaGAACAGGAACAGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: PDTEESQSAEGAWNPASTRIHLV*NRNSKV
Trigger: TACTTTGCTGTTCCTGTTCAAAACAAGATGAATCCT...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp ACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCAGAACTCTCTGCAATATaGGTGGACAGAATAATCTTT +
Preference number: 5 (lower is better)
Translates to: TQTQRKVSLRREPGIQPPELSAI*VDRIIF
Trigger: AAAGATTATTCTGTCCACCAATATTGCAGAGAGTTC...TGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp ACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACAGCTTCCGAACTCTCTGCAATATaGGTGGACAGAATAATCTTT +
Preference number: 5 (lower is better)
Translates to: TEESQSAEGAWNPASTASELSAI*VDRIIF
Trigger: AAAGATTATTCTGTCCACCAATATTGCAGAGAGTTC...GGAAGCTGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGCCAGAGAAATTCACTTaGTTCCTATATCCATCGAGA +
Preference number: 5 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGPEKFT*FLYPSR
Trigger: TCTCGATGGATATAGGAACAAAGTGAATTTCTCTGG...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp AAGGTGTTCTTCCCTCTGCTGCTCTCACGGTCGGCCTGCTCCATGACCAGCTTTGAATCAACATGCATGTaGAACTGTGAGATTCTAGTC +
Preference number: 5 (lower is better)
Translates to: KVFFPLLLSRSACSMTSFESTCM*NCEILV
Trigger: GACTAGAATCTCACAGTTCAACATGCATGTTGATTC...AAAGCTGGTCATGGAGCAGGCCGACCGTGAGAGCAGCAGAGGGAAGAACACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CAA 90 bp CAGTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGGAATCAACATGCATGTaGAACTGTGAGATTCTAGTC +
Preference number: 5 (lower is better)
Translates to: QWAQTVTPRHRGKSVCGGESTCM*NCEILV
Trigger: GACTAGAATCTCACAGTTCAACATGCATGTTGATTC...CCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGATTCCACAAAGGCTTTaGCACCATCAAATACAATGG +
Preference number: 5 (lower is better)
Translates to: VGTDCNTQTQRKVSLRREIPQRL*HHQIQW
Trigger: CCATTGTATTTGATGGTGCAAAAGCCTTTGTGGAAT...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGAGAAACATAAAGGACTaGAGCTCTAAAGTAGCGTTG +
Preference number: 5 (lower is better)
Translates to: VGTDCNTQTQRKVSLRRERNIKD*SSKVAL
Trigger: CAACGCTACTTTAGAGCTCAAGTCCTTTATGTTTCT...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp AGCAGCATCGTAGATCCAGTCGCATTGATGGAAAGGGAAGCTGCAACCAGCATTCCGTCACTCCAGTGCTaGCCACAAACAAGAGACTTT +
Preference number: 5 (lower is better)
Translates to: SSIVDPVALMEREAATSIPSLQC*PQTRDF
Trigger: AAAGTCTCTTGTTTGTGGCAAGCACTGGAGTGACGG...AATGCTGGTTGCAGCTTCCCTTTCCATCAATGCGACTGGATCTACGATGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CAA 90 bp CCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCCTGGAATCCAGCCTCCACACAAACACACCTGAATTaGGATATTCTGGTCAAACTA +
Preference number: 5 (lower is better)
Translates to: PDTEESQSAEGAWNPASTQTHLN*DILVKL
Trigger: TAGTTTGACCAGAATATCCAAATTCAGGTGTGTTTG...TGTGGAGGCTGGATTCCAGGCTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR CAA 90 bp GGCAATGTCTTGAAGCTGCGCAACTCTCTCTGGCCCAAGACACTTGCATCCATTCTTCTAAAGCCACACTaGAATGGAGTGGATAGACCT +
Preference number: 5 (lower is better)
Translates to: GNVLKLRNSLWPKTLASILLKPH*NGVDRP
Trigger: AGGTCTATCCACTCCATTCAAGTGTGGCTTTAGAAG...AATGGATGCAAGTGTCTTGGGCCAGAGAGAGTTGCGCAGCTTCAAGACATTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CAA 90 bp AAGCTGCGCAACTCTCTCTGGCCCAAGACACTTGCATCCATTTGGTCCATCACACTTATATATATACTCTaGGTCCATGACAGGTCGCCG +
Preference number: 5 (lower is better)
Translates to: KLRNSLWPKTLASIWSITLIYIL*VHDRSP
Trigger: CGGCGACCTGTCATGGACCAAGAGTATATATATAAG...TGTGATGGACCAAATGGATGCAAGTGTCTTGGGCCAGAGAGAGTTGCGCAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CAA 90 bp GGCAATGTCTTGAAGCTGCGCAACTCTCTCTGGCCCAAGACACTTGCATCCATTACCAGCGTCAGTTGGTaGATTTCAGCAGTAAGCTTT +
Preference number: 5 (lower is better)
Translates to: GNVLKLRNSLWPKTLASITSVSW*ISAVSF
Trigger: AAAGCTTACTGCTGAAATCAACCAACTGACGCTGGT...AATGGATGCAAGTGTCTTGGGCCAGAGAGAGTTGCGCAGCTTCAAGACATTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CAA 90 bp TGCCGAGCACAACCAGTTTGTGGAGCTGGTAGAGAAAGGTGTTCTTCCCTCTGCCACAAACAAGAGACTTaGCTGATGGTCTCATTTTGC +
Preference number: 5 (lower is better)
Translates to: CRAQPVCGAGRERCSSLCHKQET*LMVSFC
Trigger: GCAAAATGAGACCATCAGCAAAGTCTCTTGTTTGTG...GCAGAGGGAAGAACACCTTTCTCTACCAGCTCCACAAACTGGTTGTGCTCGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CAA 90 bp GTGGGCACAGACTGTAACACCCAGACACAGAGGAAAGTCAGTCTGCGGAGGGAGCAAACACACCTGAATTaGGATATTCTGGTCAAACTA +
Preference number: 5 (lower is better)
Translates to: VGTDCNTQTQRKVSLRREQTHLN*DILVKL
Trigger: TAGTTTGACCAGAATATCCAAATTCAGGTGTGTTTG...CTCCCTCCGCAGACTGACTTTCCTCTGTGTCTGGGTGTTACAGTCTGTGCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS-3UTR CAA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACCTGACGGGCAATGTCTaGAAGCTGCGCAACTCTCTC +
Preference number: 5 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHLTGNV*KLRNSL
Trigger: GAGAGAGTTGCGCAGCTTCAAGACATTGCCCGTCAG...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACACATTGGTCACCGTCTaGCCGATGGTGAACCAGTCG +
Preference number: 5 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHTLVTV*PMVNQS
Trigger: CGACTGGTTCACCATCGGCAAGACGGTGACCAATGT...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS TCA 90 bp GCTGGCCCCGTCACTCCAGTGCTTGCCACAAACAAGAGACTTTGCTaGTGGTCTCATTTTGCAAATCTTAAATTCCAAAGCCTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: AGPVTPVLATNKRLC*WSHFANLKFQSLER
Trigger: CCTTTCCAGGCTTTGGAATTTAAGATTTGCAAAATGAGACCATCAGCAAAGTCTCTTGTTTGTGGCAAGCACTGGAGTGACGGGGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS GCA 90 bp CCTAAGAAGGTCAATTCACCATCATGGGGGTTTTCATCTTCTCTCTaGCCACTCACTGCAAGTGCTCCAACCTCCTTTAGTAGAAGGATG +
Preference number: 5 (lower is better)
Translates to: PKKVNSPSWGFSSSL*PLTASAPTSFSRRM
Trigger: CATCCTTCTACTAAAGGAGGTTGGAGCACTTGCAGTGAGTGGGCAGAGAGAAGATGAAAACCCCCATGATGGTGAATTGACCTTCTTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000466378.1
ENST00000557332.5
CDS CCA 90 bp TTCCTAATGGACAACGCAACATCTCAGGAACAACATGATCAGGGATaGAGTTGTCCCAGAAATCCTTGTGTACCAGCCGGTAACAGTACC +
Preference number: 5 (lower is better)
Translates to: FLMDNATSQEQHDQG*SCPRNPCVPAGNST
Trigger: GGTACTGTTACCGGCTGGTACACAAGGATTTCTGGGACAACTCCATCCCTGATCATGTTGTTCCTGAGATGTTGCGTTGTCCATTAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp TGCCGAGCACAACCAGTTTGTGGAGCTGGTAGAGAAAGGTGTTCTTCCCTCTGCTACAATGGATTTGACTaGACCACACTGTCTAAAGAG +
Preference number: 5 (lower is better)
Translates to: CRAQPVCGAGRERCSSLCYNGFD*TTLSKE
Trigger: CTCTTTAGACAGTGTGGTCAAGTCAAATCCATTGTA...GCAGAGGGAAGAACACCTTTCTCTACCAGCTCCACAAACTGGTTGTGCTCGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CAA 90 bp GATCAACCTGATTCCACTCGTAGGGCTTTTCATGCCACTTGGGAACAATCTTCTTCTGGCCCAAGACACTaGCATCCATTTGGTCCATCA +
Preference number: 5 (lower is better)
Translates to: DQPDSTRRAFHATWEQSSSGPRH*HPFGPS
Trigger: TGATGGACCAAATGGATGCAAGTGTCTTGGGCCAGA...AGAAGATTGTTCCCAAGTGGCATGAAAAGCCCTACGAGTGGAATCAGGTTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CAA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACATGGTGAACCAGTCGTaGATCTGCTCGATGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHMVNQS*ICSMVS
Trigger: GCTCACCATCGAGCAGATCAACGACTGGTTCACCAT...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS GCA 90 bp AGATCTGTAACTGTCTGGGACCTGTCTGATGTGTTAAAGGAGACTTaGATAGGATCTACCGTCTGCTTCTGGAAGTCCACATTCACCCTT +
Preference number: 5 (lower is better)
Translates to: RSVTVWDLSDVLKET*IGSTVCFWKSTFTL
Trigger: AAGGGTGAATGTGGACTTCCAGAAGCAGACGGTAGATCCTATGCAAGTCTCCTTTAACACATCAGACAGGTCCCAGACAGTTACAGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp AGCAGCATCGTAGATCCAGTCGCATTGATGGAAAGGGAAGCTGCAACCAGCATTGCAGACTCTGATAATTaGTATCTTCATCACAGACCA +
Preference number: 5 (lower is better)
Translates to: SSIVDPVALMEREAATSIADSDN*YLHHRP
Trigger: TGGTCTGTGATGAAGATACAAATTATCAGAGTCTGC...AATGCTGGTTGCAGCTTCCCTTTCCATCAATGCGACTGGATCTACGATGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CAA 90 bp AGAGAGGTTTCTCTCAGCAGCATCGTAGATCCAGTCGCATTGATGGAAAGGGAACTGATAATGACAGAGTaGATGCTCTCCTTCTCAATC +
Preference number: 5 (lower is better)
Translates to: REVSLSSIVDPVALMERELIMTE*MLSFSI
Trigger: GATTGAGAAGGAGAGCATCAACTCTGTCATTATCAG...TTCCCTTTCCATCAATGCGACTGGATCTACGATGCTGCTGAGAGAAACCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS CCA 90 bp ACCACCTCTGTGACATCAATAGTTAGAAGGAGATCTGTAACTGTCTaGGACCTGTCTGATGTGTTAAAGGAGACTTGCATAGGATCTACC +
Preference number: 5 (lower is better)
Translates to: TTSVTSIVRRRSVTV*DLSDVLKETCIGST
Trigger: GGTAGATCCTATGCAAGTCTCCTTTAACACATCAGACAGGTCCCAGACAGTTACAGATCTCCTTCTAACTATTGATGTCACAGAGGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp AGCTTGTTAATAGCAGCCCTGAGAATATTAACCTCGACGACATCCTCCACGCTGAGAAACATAAAGGACTaGAGCTCTAAAGTAGCGTTG +
Preference number: 5 (lower is better)
Translates to: SLLIAALRILTSTTSSTLRNIKD*SSKVAL
Trigger: CAACGCTACTTTAGAGCTCAAGTCCTTTATGTTTCT...CAGCGTGGAGGATGTCGTCGAGGTTAATATTCTCAGGGCTGCTATTAACAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS-3UTR CAA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACGTTCTGCCTTACAGTTaGGAGTACCCAGTTTATTGG +
Preference number: 5 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHVLPYS*EYPVYW
Trigger: CCAATAAACTGGGTACTCCAAACTGTAAGGCAGAAC...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS CCA 90 bp GCCAATACAACCTGTAGGATGAATCGCTGCTTATATATATACTCTTaGTCCATGACAGGTCGCCGAGAATCAACATGCATGTTGAACTGT +
Preference number: 5 (lower is better)
Translates to: ANTTCRMNRCLYIYS*SMTGRRESTCMLNC
Trigger: ACAGTTCAACATGCATGTTGATTCTCGGCGACCTGTCATGGACCAAGAGTATATATATAAGCAGCGATTCATCCTACAGGTTGTATTGGC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACCAGGATATTTATAAGTaGTCCCTGGGATGCATGTCA +
Preference number: 5 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHQDIYK*SLGCMS
Trigger: TGACATGCATCCCAGGGACAACTTATAAATATCCTG...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR CAA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACGCAGACTCTGATAATTaGTATCTTCATCACAGACCA +
Preference number: 5 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHADSDN*YLHHRP
Trigger: TGGTCTGTGATGAAGATACAAATTATCAGAGTCTGC...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACAGAAACATAAAGGACTaGAGCTCTAAAGTAGCGTTG +
Preference number: 5 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHRNIKD*SSKVAL
Trigger: CAACGCTACTTTAGAGCTCAAGTCCTTTATGTTTCT...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp AACCACAAAGGACTCCAGTATAGTACTTGCCATTCTGATCAATCCTTAACTCTAGACACTTGCATCCATTaGGTCCATCACAGACTAGCT +
Preference number: 5 (lower is better)
Translates to: NHKGLQYSTCHSDQSLTLDTCIH*VHHRLA
Trigger: AGCTAGTCTGTGATGGACCAAATGGATGCAAGTGTC...TAGAGTTAAGGATTGATCAGAATGGCAAGTACTATACTGGAGTCCTTTGTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339063.6
CDS GCA 90 bp ACATCAGGACCACCTTCACAAAACGTGAATTTGTTCTTAAGAGTTTaGGGACTACCAATAGCAGGAAATCCATTTCTTCTGTTCGTTCGT +
Preference number: 5 (lower is better)
Translates to: TSGPPSQNVNLFLRV*GLPIAGNPFLLFVR
Trigger: ACGAACGAACAGAAGAAATGGATTTCCTGCTATTGGTAGTCCGCAAACTCTTAAGAACAAATTCACGTTTTGTGAAGGTGGTCCTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS-3UTR CAA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACAGGATTCATCTTGTTTaGAACAGGAACAGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHRIHLV*NRNSKV
Trigger: TACTTTGCTGTTCCTGTTCAAAACAAGATGAATCCT...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
CDS-3UTR CAA 90 bp CTATCACCCAAAGAGAAAAGAAGAAAGAAAAGGCCTTTAGGATGCAGTGGGCACGAACTCTCTGCAATATaGGTGGACAGAATAATCTTT +
Preference number: 5 (lower is better)
Translates to: LSPKEKRRKKRPLGCSGHELSAI*VDRIIF
Trigger: AAAGATTATTCTGTCCACCAATATTGCAGAGAGTTC...GTGCCCACTGCATCCTAAAGGCCTTTTCTTTCTTCTTTTCTCTTTGGGTGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000557332.5
CDS TCA 90 bp CAAGCCTTGTTCCCACTCTCCTTCATATCCAAGTCATCAAACATCTaGATGAGAGAGACAGCAACTTCATATATATCCTTAGTTATCACC +
Preference number: 5 (lower is better)
Translates to: QALFPLSFISKSSNI*MRETATSYISLVIT
Trigger: GGTGATAACTAAGGATATATATGAAGTTGCTGTCTCTCTCATTCAGATGTTTGATGACTTGGATATGAAGGAGAGTGGGAACAAGGCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS TCA 90 bp AGACATCCAAATACATGTCCAAGGACTATGAGTTTACCAAGTTGCTaGTTTACAGGAAGTTGGGCTAAAACTCTTCCTAAGAAGGTCAAT +
Preference number: 5 (lower is better)
Translates to: RHPNTCPRTMSLPSC*FTGSWAKTLPKKVN
Trigger: ATTGACCTTCTTAGGAAGAGTTTTAGCCCAACTTCCTGTAAATCAGCAACTTGGTAAACTCATAGTCCTTGGACATGTATTTGGATGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000466378.1
ENST00000557332.5
CDS GCA 90 bp TTATATATATACTCTTGGTCCATGACAGGTCGCCGAGAATCAACATaGATGTTGAACTGTGAGATTCTAGTCTTCAATTCTTCATATAAT +
Preference number: 5 (lower is better)
Translates to: LYIYSWSMTGRREST*MLNCEILVFNSSYN
Trigger: ATTATATGAAGAATTGAAGACTAGAATCTCACAGTTCAACATGCATGTTGATTCTCGGCGACCTGTCATGGACCAAGAGTATATATATAA
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS CCA 72 bp GACCTTTCGAACGCAGCGGCCGGCCGGGCCGGAGCTTaGGCCAGAGCCGGAGCCTGGGCCGCGGGACCAGCG +
Preference number: 6 (lower is better)
Translates to: DLSNAAAGRAGA*ARAGAWAAGPA
Trigger: CGCTGGTCCCGCGGCCCAGGCTCCGGCTCTGGCCCAAGCTCCGGCCCGGCCGGCCGCTGCGTTCGAAAGGTC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS CCA 72 bp GGGCCGCGCGTCGGGTTGTGTAGTGACCACTCGCCCTaGACGGTCAGGGGTCCCTGGAGCCCCGCGAGAGGG +
Preference number: 6 (lower is better)
Translates to: GPRVGLCSDHSP*TVRGPWSPARG
Trigger: CCCTCTCGCGGGGCTCCAGGGACCCCTGACCGTCCAGGGCGAGTGGTCACTACACAACCCGACGCGCGGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496087.5
CDS CAA 90 bp GCCGCCCCTGCCGGGAAGGCGGGCGGCGCGCCCAGCAGCTCCACATaGGTCACCGTCTTGCCGATGGTGAACCAGTCGTTGATCTGCTCG +
Preference number: 6 (lower is better)
Translates to: AAPAGKAGGAPSSST*VTVLPMVNQSLICS
Trigger: CGAGCAGATCAACGACTGGTTCACCATCGGCAAGACGGTGACCAATGTGGAGCTGCTGGGCGCGCCGCCCGCCTTCCCGGCAGGGGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS CAA 72 bp GCCGGGAAGGCGGGCGGCGCGCCCAGCAGCTCCACATaGGTCACCGTCTTGCCGATGGTGAACCAGTCGTTG +
Preference number: 6 (lower is better)
Translates to: AGKAGGAPSSST*VTVLPMVNQSL
Trigger: CAACGACTGGTTCACCATCGGCAAGACGGTGACCAATGTGGAGCTGCTGGGCGCGCCGCCCGCCTTCCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS CAA 90 bp CTAGCTCAGCTTCCTTACAGGCACCGCTCTGGGCCGCGCGTCGGGTaGTGTAGTGACCACTCGCCCTGGACGGTCAGGGGTCCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: LAQLPYRHRSGPRVG*CSDHSPWTVRGPWS
Trigger: GCTCCAGGGACCCCTGACCGTCCAGGGCGAGTGGTCACTACACAACCCGACGCGCGGCCCAGAGCGGTGCCTGTAAGGAAGCTGAGCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496087.5
CDS CAA 72 bp CTTCCTTACAGGCACCGCTCTGGGCCGCGCGTCGGGTaGTGTAGTGACCACTCGCCCTGGACGGTCAGGGGT +
Preference number: 6 (lower is better)
Translates to: LPYRHRSGPRVG*CSDHSPWTVRG
Trigger: ACCCCTGACCGTCCAGGGCGAGTGGTCACTACACAACCCGACGCGCGGCCCAGAGCGGTGCCTGTAAGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496087.5
CDS CCA 72 bp GGGTGCAGCCGCTCACCAGAGAGGCGAACCACTGGCTaGCCCCGTCACTCCAGTGCTTGCCACAAACAAGAG +
Preference number: 6 (lower is better)
Translates to: GCSRSPERRTTG*PRHSSACHKQE
Trigger: CTCTTGTTTGTGGCAAGCACTGGAGTGACGGGGCCAGCCAGTGGTTCGCCTCTCTGGTGAGCGGCTGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS CAA 90 bp GGGAAGGCGGGCGGCGCGCCCAGCAGCTCCACATTGGTCACCGTCTaGCCGATGGTGAACCAGTCGTTGATCTGCTCGATGGTGAGCTTC +
Preference number: 6 (lower is better)
Translates to: GKAGGAPSSSTLVTV*PMVNQSLICSMVSF
Trigger: GAAGCTCACCATCGAGCAGATCAACGACTGGTTCACCATCGGCAAGACGGTGACCAATGTGGAGCTGCTGGGCGCGCCGCCCGCCTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS TCA 72 bp TGGCGATGCTGCTTGCCCCTATCTTCCGGGGCTGGGTaGCCACAATGCTGCAGTAGGCGGAGCGCTGAACGT +
Preference number: 6 (lower is better)
Translates to: WRCCLPLSSGAG*PQCCSRRSAER
Trigger: ACGTTCAGCGCTCCGCCTACTGCAGCATTGTGGTCACCCAGCCCCGGAAGATAGGGGCAAGCAGCATCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000554571.1
CDS GCA 72 bp CGCTGTGCACCACAGAGAAGACCTTCACAAGGAGGGTaGAGCCGCTCACCAGAGAGGCGAACCACTGGCTGG +
Preference number: 6 (lower is better)
Translates to: RCAPQRRPSQGG*SRSPERRTTGW
Trigger: CCAGCCAGTGGTTCGCCTCTCTGGTGAGCGGCTGCACCCTCCTTGTGAAGGTCTTCTCTGTGGTGCACAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS CAA 72 bp GGCGGCGCGCCCAGCAGCTCCACATTGGTCACCGTCTaGCCGATGGTGAACCAGTCGTTGATCTGCTCGATG +
Preference number: 6 (lower is better)
Translates to: GGAPSSSTLVTV*PMVNQSLICSM
Trigger: CATCGAGCAGATCAACGACTGGTTCACCATCGGCAAGACGGTGACCAATGTGGAGCTGCTGGGCGCGCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS TCA 72 bp CCACCACACCTCCCAGGGTCCAGGCACGCTCTTTACTaGTCCACCTGGCGATGCTGCTTGCCCCTATCTTCC +
Preference number: 6 (lower is better)
Translates to: PPHLPGSRHALY*STWRCCLPLSS
Trigger: GGAAGATAGGGGCAAGCAGCATCGCCAGGTGGATCAGTAAAGAGCGTGCCTGGACCCTGGGAGGTGTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000554571.1
CDS CAA 90 bp AGCAGCTCCACATTGGTCACCGTCTTGCCGATGGTGAACCAGTCGTaGATCTGCTCGATGGTGAGCTTCCGCAGCATCCTCAAGGCCCAG +
Preference number: 6 (lower is better)
Translates to: SSSTLVTVLPMVNQS*ICSMVSFRSILKAQ
Trigger: CTGGGCCTTGAGGATGCTGCGGAAGCTCACCATCGAGCAGATCAACGACTGGTTCACCATCGGCAAGACGGTGACCAATGTGGAGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS GCA 72 bp GTCACCGTCTTGCCGATGGTGAACCAGTCGTTGATCTaGTCGATGGTGAGCTTCCGCAGCATCCTCAAGGCC +
Preference number: 6 (lower is better)
Translates to: VTVLPMVNQSLI*SMVSFRSILKA
Trigger: GGCCTTGAGGATGCTGCGGAAGCTCACCATCGAGCAGATCAACGACTGGTTCACCATCGGCAAGACGGTGAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS GCA 72 bp GAATGTGTTTCAACACGACAGTTGTCTTGGGGTCCTTaGCAGCCAGCTCCCTCACCGCCATCTCCTCATCCG +
Preference number: 6 (lower is better)
Translates to: ECVSTRQLSWGP*QPAPSPPSPHP
Trigger: CGGATGAGGAGATGGCGGTGAGGGAGCTGGCTGGCAAGGACCCCAAGACAACTGTCGTGTTGAAACACATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS GCA 72 bp AGAGAGGCGAACCACTGGCTGGCCCCGTCACTCCAGTaGTTGCCACAAACAAGAGACTTTGCTGATGGTCTC +
Preference number: 6 (lower is better)
Translates to: REANHWLAPSLQ*LPQTRDFADGL
Trigger: GAGACCATCAGCAAAGTCTCTTGTTTGTGGCAAGCACTGGAGTGACGGGGCCAGCCAGTGGTTCGCCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS GCA 72 bp CCTGAGTACTGGTACACATCCACGTGCAGGACGCTGTaGACCACAGAGAAGACCTTCACAAGGAGGGTGCAG +
Preference number: 6 (lower is better)
Translates to: PEYWYTSTCRTL*TTEKTFTRRVQ
Trigger: CTGCACCCTCCTTGTGAAGGTCTTCTCTGTGGTGCACAGCGTCCTGCACGTGGATGTGTACCAGTACTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS GCA 72 bp GCATCCTGGACCCCTGAGTACTGGTACACATCCACGTaGAGGACGCTGTGCACCACAGAGAAGACCTTCACA +
Preference number: 6 (lower is better)
Translates to: ASWTPEYWYTST*RTLCTTEKTFT
Trigger: TGTGAAGGTCTTCTCTGTGGTGCACAGCGTCCTGCACGTGGATGTGTACCAGTACTCAGGGGTCCAGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS CCA 72 bp GCCAAAGATGGCCTTGGACCTGGCCCACTGGTTGGTTaGACACTGCGACACACATCAAGCTCTTGTGCTTCG +
Preference number: 6 (lower is better)
Translates to: AKDGLGPGPLVG*TLRHTSSSCAS
Trigger: CGAAGCACAAGAGCTTGATGTGTGTCGCAGTGTCCAACCAACCAGTGGGCCAGGTCCAAGGCCATCTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409874.9
ENST00000496087.5
ENST00000554571.1
CDS TCA 72 bp GCAAAAGGTGCCAGACAGACCAAGTCTGGATGTGGGTaGGTGGGCAAGGGCACCAGCGTCAGTTGGTTGATT +
Preference number: 6 (lower is better)
Translates to: AKGARQTKSGCG*VGKGTSVSWLI
Trigger: AATCAACCAACTGACGCTGGTGCCCTTGCCCACTCACCCACATCCAGACTTGGTCTGTCTGGCACCTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS TCA 72 bp GAGGACGTCTCTTATGTTGATGGCATCCTGGACCCCTaGGTACTGGTACACATCCACGTGCAGGACGCTGTG +
Preference number: 6 (lower is better)
Translates to: EDVSYVDGILDP*VLVHIHVQDAV
Trigger: CACAGCGTCCTGCACGTGGATGTGTACCAGTACTCAGGGGTCCAGGATGCCATCAACATAAGAGACGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS GCA 72 bp CTGCAAGTGCTCCAACCTCCTTTAGTAGAAGGATGGTaGGCTCAATGTCACTCAGACCAGGCGGGGAAAGGG +
Preference number: 6 (lower is better)
Translates to: LQVLQPPLVEGW*AQCHSDQAGKG
Trigger: CCCTTTCCCCGCCTGGTCTGAGTGACATTGAGCGCACCATCCTTCTACTAAAGGAGGTTGGAGCACTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000466378.1
ENST00000557332.5
CDS CCA 72 bp CATAGGGAGGAATGTGTTTCAACACGACAGTTGTCTTaGGGTCCTTGCCAGCCAGCTCCCTCACCGCCATCT +
Preference number: 6 (lower is better)
Translates to: HREECVSTRQLS*GPCQPAPSPPS
Trigger: AGATGGCGGTGAGGGAGCTGGCTGGCAAGGACCCCAAGACAACTGTCGTGTTGAAACACATTCCTCCCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS CAA 72 bp GAGGCGAACCACTGGCTGGCCCCGTCACTCCAGTGCTaGCCACAAACAAGAGACTTTGCTGATGGTCTCATT +
Preference number: 6 (lower is better)
Translates to: EANHWLAPSLQC*PQTRDFADGLI
Trigger: AATGAGACCATCAGCAAAGTCTCTTGTTTGTGGCAAGCACTGGAGTGACGGGGCCAGCCAGTGGTTCGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS CAA 72 bp ACATTGGTCACCGTCTTGCCGATGGTGAACCAGTCGTaGATCTGCTCGATGGTGAGCTTCCGCAGCATCCTC +
Preference number: 6 (lower is better)
Translates to: TLVTVLPMVNQS*ICSMVSFRSIL
Trigger: GAGGATGCTGCGGAAGCTCACCATCGAGCAGATCAACGACTGGTTCACCATCGGCAAGACGGTGACCAATGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS CAA 72 bp AGCCAAAGATGGCCTTGGACCTGGCCCACTGGTTGGTaGGACACTGCGACACACATCAAGCTCTTGTGCTTC +
Preference number: 6 (lower is better)
Translates to: SQRWPWTWPTGW*DTATHIKLLCF
Trigger: GAAGCACAAGAGCTTGATGTGTGTCGCAGTGTCCAACCAACCAGTGGGCCAGGTCCAAGGCCATCTTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409874.9
ENST00000496087.5
ENST00000554571.1
CDS GCA 72 bp AGGCGAACCACTGGCTGGCCCCGTCACTCCAGTGCTTaGCACAAACAAGAGACTTTGCTGATGGTCTCATTT +
Preference number: 6 (lower is better)
Translates to: RRTTGWPRHSSA*HKQETLLMVSF
Trigger: AAATGAGACCATCAGCAAAGTCTCTTGTTTGTGGCAAGCACTGGAGTGACGGGGCCAGCCAGTGGTTCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS CCA 72 bp AAAAACACCAACACACTGCTTCGCTCCAACACAAACTaGGCCCCCGACCAAGCCTTGTTCCCACTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: KNTNTLLRSNTN*APDQALFPLSF
Trigger: GAAGGAGAGTGGGAACAAGGCTTGGTCGGGGGCCCAGTTTGTGTTGGAGCGAAGCAGTGTGTTGGTGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS CCA 72 bp TCTCTTATGTTGATGGCATCCTGGACCCCTGAGTACTaGTACACATCCACGTGCAGGACGCTGTGCACCACA +
Preference number: 6 (lower is better)
Translates to: SLMLMASWTPEY*YTSTCRTLCTT
Trigger: TGTGGTGCACAGCGTCCTGCACGTGGATGTGTACCAGTACTCAGGGGTCCAGGATGCCATCAACATAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS CCA 72 bp TGCTGGATGAGGACGTCTCTTATGTTGATGGCATCCTaGACCCCTGAGTACTGGTACACATCCACGTGCAGG +
Preference number: 6 (lower is better)
Translates to: CWMRTSLMLMAS*TPEYWYTSTCR
Trigger: CCTGCACGTGGATGTGTACCAGTACTCAGGGGTCCAGGATGCCATCAACATAAGAGACGTCCTCATCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS CAA 90 bp CTCACCAGAGAGGCGAACCACTGGCTGGCCCCGTCACTCCAGTGCTaGCCACAAACAAGAGACTTTGCTGATGGTCTCATTTTGCAAATC +
Preference number: 6 (lower is better)
Translates to: LTREANHWLAPSLQC*PQTRDFADGLILQI
Trigger: GATTTGCAAAATGAGACCATCAGCAAAGTCTCTTGTTTGTGGCAAGCACTGGAGTGACGGGGCCAGCCAGTGGTTCGCCTCTCTGGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS GCA 72 bp TTATTTCACCCAGACCTGGCAAAAACACCAACACACTaGTTCGCTCCAACACAAACTGGGCCCCCGACCAAG +
Preference number: 6 (lower is better)
Translates to: LFHPDLAKTPTH*FAPTQTGPPTK
Trigger: CTTGGTCGGGGGCCCAGTTTGTGTTGGAGCGAAGCAGTGTGTTGGTGTTTTTGCCAGGTCTGGGTGAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS CCA 72 bp TCACTGCAAGTGCTCCAACCTCCTTTAGTAGAAGGATaGTGCGCTCAATGTCACTCAGACCAGGCGGGGAAA +
Preference number: 6 (lower is better)
Translates to: SLQVLQPPLVEG*CAQCHSDQAGK
Trigger: TTTCCCCGCCTGGTCTGAGTGACATTGAGCGCACCATCCTTCTACTAAAGGAGGTTGGAGCACTTGCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000466378.1
ENST00000557332.5
CDS CCA 72 bp CTGTATTTGTTAATATACTCTACTTCTGAGCTCCTTTaGCTGAGTGACCTTTCGAACGCAGCGGCCGGCCGG +
Preference number: 6 (lower is better)
Translates to: LYLLIYSTSELL*LSDLSNAAAGR
Trigger: CCGGCCGGCCGCTGCGTTCGAAAGGTCACTCAGCCAAAGGAGCTCAGAAGTAGAGTATATTAACAAATACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409874.9
CDS GCA 72 bp ACTGTCTGGGACCTGTCTGATGTGTTAAAGGAGACTTaGATAGGATCTACCGTCTGCTTCTGGAAGTCCACA +
Preference number: 6 (lower is better)
Translates to: TVWDLSDVLKET*IGSTVCFWKST
Trigger: TGTGGACTTCCAGAAGCAGACGGTAGATCCTATGCAAGTCTCCTTTAACACATCAGACAGGTCCCAGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS GCA 72 bp GATGTGTTAAAGGAGACTTGCATAGGATCTACCGTCTaGTTCTGGAAGTCCACATTCACCCTTGTGTTCCTG +
Preference number: 6 (lower is better)
Translates to: DVLKETCIGSTV*FWKSTFTLVFL
Trigger: CAGGAACACAAGGGTGAATGTGGACTTCCAGAAGCAGACGGTAGATCCTATGCAAGTCTCCTTTAACACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS CAA 72 bp AAGGGCACAGAGCCATCTGTCATGTTTTCTACTGACTaGGAAAAGAGGCCCTTGAGAACTTCATGGCTTTGC +
Preference number: 6 (lower is better)
Translates to: KGTEPSVMFSTD*EKRPLRTSWLC
Trigger: GCAAAGCCATGAAGTTCTCAAGGGCCTCTTTTCCAAGTCAGTAGAAAACATGACAGATGGCTCTGTGCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS CAA 90 bp ACACTGCGACACACATCAAGCTCTTGTGCTTCGAGCTGTCTGTATTaGTTAATATACTCTACTTCTGAGCTCCTTTGGCTGAGTGACCTG +
Preference number: 6 (lower is better)
Translates to: TLRHTSSSCASSCLY*LIYSTSELLWLSDL
Trigger: CAGGTCACTCAGCCAAAGGAGCTCAGAAGTAGAGTATATTAACAAATACAGACAGCTCGAAGCACAAGAGCTTGATGTGTGTCGCAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554571.1
CDS TCA 72 bp CTTCCTAATGGACAACGCAACATCTCAGGAACAACATaGTCAGGGATGGAGTTGTCCCAGAAATCCTTGTGT +
Preference number: 6 (lower is better)
Translates to: LPNGQRNISGTT*SGMELSQKSLC
Trigger: ACACAAGGATTTCTGGGACAACTCCATCCCTGATCATGTTGTTCCTGAGATGTTGCGTTGTCCATTAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS TCA 72 bp CTGTCATGTTTTCTACTGACTTGGAAAAGAGGCCCTTaGGAACTTCATGGCTTTGCTTGGACTCGTAGGACT +
Preference number: 6 (lower is better)
Translates to: LSCFLLTWKRGP*ELHGFAWTRRT
Trigger: AGTCCTACGAGTCCAAGCAAAGCCATGAAGTTCTCAAGGGCCTCTTTTCCAAGTCAGTAGAAAACATGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339063.6
ENST00000409874.9
CDS CAA 90 bp ACACTGCGACACACATCAAGCTCTTGTGCTTCGAGCTGTCTGTATTaGTTAATATACTCTACTTCTGAGCTCCTTTGGCTGAGTGACCTT +
Preference number: 6 (lower is better)
Translates to: TLRHTSSSCASSCLY*LIYSTSELLWLSDL
Trigger: AAGGTCACTCAGCCAAAGGAGCTCAGAAGTAGAGTATATTAACAAATACAGACAGCTCGAAGCACAAGAGCTTGATGTGTGTCGCAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000496087.5
CDS GCA 72 bp GGTTGGTTGGACACTGCGACACACATCAAGCTCTTGTaGTTCGAGCTGTCTGTATTTGTTAATATACTCTAC +
Preference number: 6 (lower is better)
Translates to: GWLDTATHIKLL*FELSVFVNILY
Trigger: GTAGAGTATATTAACAAATACAGACAGCTCGAAGCACAAGAGCTTGATGTGTGTCGCAGTGTCCAACCAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409874.9
ENST00000496087.5
ENST00000554571.1
CDS CCA 72 bp ACCTGTAGGATGAATCGCTGCTTATATATATACTCTTaGTCCATGACAGGTCGCCGAGAATCAACATGCATG +
Preference number: 6 (lower is better)
Translates to: TCRMNRCLYIYS*SMTGRRESTCM
Trigger: CATGCATGTTGATTCTCGGCGACCTGTCATGGACCAAGAGTATATATATAAGCAGCGATTCATCCTACAGGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS CCA 72 bp TCTGAAGCAGGACTCCAGTTGTCATATAAATTAGCCTaGTGTCCTCTGTTGCTATTTTCTCTAGCCCTACCT +
Preference number: 6 (lower is better)
Translates to: SEAGLQLSYKLA*CPLLLFSLALP
Trigger: AGGTAGGGCTAGAGAAAATAGCAACAGAGGACACCAGGCTAATTTATATGACAACTGGAGTCCTGCTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409874.9
ENST00000554571.1
CDS CAA 72 bp ACTGGTTGGTTGGACACTGCGACACACATCAAGCTCTaGTGCTTCGAGCTGTCTGTATTTGTTAATATACTC +
Preference number: 6 (lower is better)
Translates to: TGWLDTATHIKL*CFELSVFVNIL
Trigger: GAGTATATTAACAAATACAGACAGCTCGAAGCACAAGAGCTTGATGTGTGTCGCAGTGTCCAACCAACCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409874.9
ENST00000496087.5
ENST00000554571.1
CDS GCA 72 bp GCTCACCCATGTCAAGTAATTTCACTTTCAAGATCGTaGTTCCTAATGGACAACGCAACATCTCAGGAACAA +
Preference number: 6 (lower is better)
Translates to: AHPCQVISLSRS*FLMDNATSQEQ
Trigger: TTGTTCCTGAGATGTTGCGTTGTCCATTAGGAAGCACGATCTTGAAAGTGAAATTACTTGACATGGGTGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS GCA 72 bp TACTCTTGGTCCATGACAGGTCGCCGAGAATCAACATaGATGTTGAACTGTGAGATTCTAGTCTTCAATTCT +
Preference number: 6 (lower is better)
Translates to: YSWSMTGRREST*MLNCEILVFNS
Trigger: AGAATTGAAGACTAGAATCTCACAGTTCAACATGCATGTTGATTCTCGGCGACCTGTCATGGACCAAGAGTA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS CAA 72 bp CACACATCAAGCTCTTGTGCTTCGAGCTGTCTGTATTaGTTAATATACTCTACTTCTGAGCTCCTTTGGCTG +
Preference number: 6 (lower is better)
Translates to: HTSSSCASSCLY*LIYSTSELLWL
Trigger: CAGCCAAAGGAGCTCAGAAGTAGAGTATATTAACAAATACAGACAGCTCGAAGCACAAGAGCTTGATGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409874.9
ENST00000496087.5
ENST00000554571.1
CDS CAA 72 bp AGACACTTGCATCCATTTGGTCCATCACAGACTAGCTaGTTAATAGCAGCCCTGAGAATATTAACCTTGGAC +
Preference number: 6 (lower is better)
Translates to: RHLHPFGPSQTS*LIAALRILTLD
Trigger: GTCCAAGGTTAATATTCTCAGGGCTGCTATTAACAAGCTAGTCTGTGATGGACCAAATGGATGCAAGTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557332.5
CDS GCA 72 bp ATTCATCTTGTTTTGAACAGGAACAGCAAAGTAGTCTaGAAACTCTTTACAGCTGATGGTAGCCGACATCAG +
Preference number: 6 (lower is better)
Translates to: IHLVLNRNSKVV*KLFTADGSRHQ
Trigger: CTGATGTCGGCTACCATCAGCTGTAAAGAGTTTGCAGACTACTTTGCTGTTCCTGTTCAAAACAAGATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS GCA 72 bp ATGCCTCAACAAGTGCAATACAGTCACTCTTGCTACTaGCAGAGAAATTCACTTTGTTCCTATATCCATCGA +
Preference number: 6 (lower is better)
Translates to: MPQQVQYSHSCY*QRNSLCSYIHR
Trigger: TCGATGGATATAGGAACAAAGTGAATTTCTCTGGCAGTAGCAAGAGTGACTGTATTGCACTTGTTGAGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000466378.1
ENST00000557332.5
CDS CAA 72 bp TGGTCCATGACAGGTCGCCGAGAATCAACATGCATGTaGAACTGTGAGATTCTAGTCTTCAATTCTTCATAT +
Preference number: 6 (lower is better)
Translates to: WSMTGRRESTCM*NCEILVFNSSY
Trigger: ATATGAAGAATTGAAGACTAGAATCTCACAGTTCAACATGCATGTTGATTCTCGGCGACCTGTCATGGACCA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS CAA 90 bp GGACTGGACTTAAAAAGACATTATTCTGTTCTTCTAAAGCCACACTaGAATGGAGTGGATAGACCTGCAACCTTTTATGAACCAGGCTTG +
Preference number: 6 (lower is better)
Translates to: GLDLKRHYSVLLKPH*NGVDRPATFYEPGL
Trigger: CAAGCCTGGTTCATAAAAGGTTGCAGGTCTATCCACTCCATTCAAGTGTGGCTTTAGAAGAACAGAATAATGTCTTTTTAAGTCCAGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS CAA 90 bp GCCTTCCATGTTTTAAATGCCTCAACAAGTGCAATACAGTCACTCTaGCTACTGCCAGAGAAATTCACTTTGTTCCTATATCCATCGAGA +
Preference number: 6 (lower is better)
Translates to: AFHVLNASTSAIQSL*LLPEKFTLFLYPSR
Trigger: TCTCGATGGATATAGGAACAAAGTGAATTTCTCTGGCAGTAGCAAGAGTGACTGTATTGCACTTGTTGAGGCATTTAAAACATGGAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000466378.1
ENST00000557332.5
CDS CAA 90 bp AGCAGAATTTCCAGAAACATAAAGGACTTGAGCTCTAAAGTAGCGTaGTTTATCAAAATCAGCAAAAGGTGCCAGACAGACCAAGTCTGG +
Preference number: 6 (lower is better)
Translates to: SRISRNIKDLSSKVA*FIKISKRCQTDQVW
Trigger: CCAGACTTGGTCTGTCTGGCACCTTTTGCTGATTTTGATAAACAACGCTACTTTAGAGCTCAAGTCCTTTATGTTTCTGGAAATTCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS CAA 90 bp ATATACTCTTGGTCCATGACAGGTCGCCGAGAATCAACATGCATGTaGAACTGTGAGATTCTAGTCTTCAATTCTTCATATAATTCAGCC +
Preference number: 6 (lower is better)
Translates to: IYSWSMTGRRESTCM*NCEILVFNSSYNSA
Trigger: GGCTGAATTATATGAAGAATTGAAGACTAGAATCTCACAGTTCAACATGCATGTTGATTCTCGGCGACCTGTCATGGACCAAGAGTATAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS TCA 72 bp GTGGATAGACCTGCAACCTTTTATGAACCAGGCTTGTaGGAAGTTCATGCATATAATTTATTTCACCCAGAC +
Preference number: 6 (lower is better)
Translates to: VDRPATFYEPGL*EVHAYNLFHPD
Trigger: GTCTGGGTGAAATAAATTATATGCATGAACTTCTCACAAGCCTGGTTCATAAAAGGTTGCAGGTCTATCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS TCA 72 bp ATTCATCTAGACATCCAAATACATGTCCAAGGACTATaGGTTTACCAAGTTGCTGATTTACAGGAAGTTGGG +
Preference number: 6 (lower is better)
Translates to: IHLDIQIHVQGL*VYQVADLQEVG
Trigger: CCCAACTTCCTGTAAATCAGCAACTTGGTAAACTCATAGTCCTTGGACATGTATTTGGATGTCTAGATGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000466378.1
ENST00000557332.5
CDS GCA 72 bp AACATATTTGACATCTGGAACTGTGACAGAACTCTCTaGAATATTGGTGGACAGAATAATCTTTCTGTACCC +
Preference number: 6 (lower is better)
Translates to: NIFDIWNCDRTL*NIGGQNNLSVP
Trigger: GGGTACAGAAAGATTATTCTGTCCACCAATATTGCAGAGAGTTCTGTCACAGTTCCAGATGTCAAATATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS CAA 72 bp GTTTTAAATGCCTCAACAAGTGCAATACAGTCACTCTaGCTACTGCCAGAGAAATTCACTTTGTTCCTATAT +
Preference number: 6 (lower is better)
Translates to: VLNASTSAIQSL*LLPEKFTLFLY
Trigger: ATATAGGAACAAAGTGAATTTCTCTGGCAGTAGCAAGAGTGACTGTATTGCACTTGTTGAGGCATTTAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000466378.1
ENST00000557332.5
CDS CAA 72 bp GAATACCTCAGCAGAATTTCCAGAAACATAAAGGACTaGAGCTCTAAAGTAGCGTTGTTTATCAAAATCAGC +
Preference number: 6 (lower is better)
Translates to: EYLSRISRNIKD*SSKVALFIKIS
Trigger: GCTGATTTTGATAAACAACGCTACTTTAGAGCTCAAGTCCTTTATGTTTCTGGAAATTCTGCTGAGGTATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS CAA 90 bp ATCTACAAAGAATACCTCAGCAGAATTTCCAGAAACATAAAGGACTaGAGCTCTAAAGTAGCGTTGTTTATCAAAATCAGCAAAAGGTGC +
Preference number: 6 (lower is better)
Translates to: IYKEYLSRISRNIKD*SSKVALFIKISKRC
Trigger: GCACCTTTTGCTGATTTTGATAAACAACGCTACTTTAGAGCTCAAGTCCTTTATGTTTCTGGAAATTCTGCTGAGGTATTCTTTGTAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS TCA 72 bp AATGTGCTCCAAATCATTAAGATAATACTCTTCAACTaGATGGGGCTTGCCTTCCACTTCAAAAATATATGC +
Preference number: 6 (lower is better)
Translates to: NVLQIIKIILFN*MGLAFHFKNIC
Trigger: GCATATATTTTTGAAGTGGAAGGCAAGCCCCATTCAGTTGAAGAGTATTATCTTAATGATTTGGAGCACATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5
CDS GCA 72 bp TCTCCATCAAAAGATGTAGATCTACATGAGACTTATTaGCATAATCTACAAAGAATACCTCAGCAGAATTTC +
Preference number: 6 (lower is better)
Translates to: SPSKDVDLHETY*HNLQRIPQQNF
Trigger: GAAATTCTGCTGAGGTATTCTTTGTAGATTATGGCAATAAGTCTCATGTAGATCTACATCTTTTGATGGAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339063.6
ENST00000409874.9
ENST00000557332.5