RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TDRD6 (Homo sapiens)

Ensembl gene IDs: ENSG00000180113

Ensembl transcript IDs: ENST00000316081.11, ENST00000450697.1, ENST00000544460.5

Found 447 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTAGGGCAGCTTCTGACTaGTTGGCCACAGCTATAGAT +
Preference number: 2 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTRAASD*LATAID
Trigger: ATCTATAGCTGTGGCCAATCAGTCAGAAGCTGCCCT...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
3UTR-3UTR TCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATTTCAAGGGCAGCTTCTaGCTGATTGGCCACAGCTAT +
Preference number: 2 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYFKGSF*LIGHSY
Trigger: ATAGCTGTGGCCAATCAGTCAGAAGCTGCCCTTGAA...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
3UTR-3UTR GCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATTTGGTCTGCGTAAGATaGCACTTGTTCAAGGGCAGC +
Preference number: 2 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYLVCVR*HLFKGS
Trigger: GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAA...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
3UTR-3UTR TCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTCTAATGCATCTTCTCTaGGCTTTGCTTCTGGCAATT +
Preference number: 2 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTLMHLL*ALLLAI
Trigger: AATTGCCAGAAGCAAAGCTCAGAGAAGATGCATTAG...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
3UTR-3UTR GCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTAATACTCTGTTGGTCTaGGTAAGATGCCACTTGTTC +
Preference number: 2 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTNTLLV*VRCHLF
Trigger: GAACAAGTGGCATCTTACGCAGACCAACAGAGTATT...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
3UTR-3UTR CCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATACAGTCTTTTGTTGGTaGCGCATGCTGATGCTGAAA +
Preference number: 2 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYTVFCW*RMLMLK
Trigger: TTTCAGCATCAGCATGCGCCACCAACAAAAGACTGT...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
3UTR-3UTR GCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATAATACTCTGTTGGTCTaGGTAAGATGCCACTTGTTC +
Preference number: 2 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYNTLLV*VRCHLF
Trigger: GAACAAGTGGCATCTTACGCAGACCAACAGAGTATT...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
3UTR-3UTR CCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTTTTATACCACTCATTTaGTACCCTAGTCCTATCTTA +
Preference number: 2 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTFIPLI*YPSPIL
Trigger: TAAGATAGGACTAGGGTACCAAATGAGTGGTATAAA...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
3UTR-3UTR CCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATATGTTTAAAAAGTCATaGGCTTCAAAGTTAGGTAGG +
Preference number: 2 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYMFKKS*ASKLGR
Trigger: CCTACCTAACTTTGAAGCCCATGACTTTTTAAACAT...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
3UTR-3UTR CAA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATTTCTCAAATACTCTGTaGGTCTGCGTAAGATGCCAC +
Preference number: 3 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYFSNTL*VCVRCH
Trigger: GTGGCATCTTACGCAGACCAACAGAGTATTTGAGAA...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
3UTR-3UTR CAA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATTTTTACAGTCTTTTGTaGGTGGCGCATGCTGATGCT +
Preference number: 3 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYFYSLL*VAHADA
Trigger: AGCATCAGCATGCGCCACCAACAAAAGACTGTAAAA...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
3UTR-3UTR CAA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTATGAGTAAGCCAAACTaGTCTATTCATTATTCCAGG +
Preference number: 3 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTMSKPN*SIHYSR
Trigger: CCTGGAATAATGAATAGACAAGTTTGGCTTACTCAT...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
3UTR-3UTR CAA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTAAACTCAGCTTGAAATaGAAGGCTTCCTATAATCTG +
Preference number: 3 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTKLSLK*KASYNL
Trigger: CAGATTATAGGAAGCCTTCAATTTCAAGCTGAGTTT...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
3UTR TCA 72 bp AAGGCTTCCTATAATCTGATCCTAATGCATCTTCTCTaGGCTTTGCTTCTGGCAATTCACATTATATTATCT +
Preference number: 3 (lower is better)
Translates to: KASYNLILMHLL*ALLLAIHIILS
Trigger: AGATAATATAATGTGAATTGCCAGAAGCAAAGCTCAGAGAAGATGCATTAGGATCAGATTATAGGAAGCCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGGCGTCGAGCACATCTTaGCGGCGCGGCGCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQASSTS*RRGAAP
Trigger: GGGGGCCGCGCCGCGCCGTCAAGATGTGCTCGACGC...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACCTGTGCCTGCCGGCTaGCCACGCGGCAGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPPVPAG*PRGSGA
Trigger: GGCACCGCTGCCGCGTGGTCAGCCGGCAGGCACAGG...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGGACACGGCTCTCCTGTaGCTGCCGGCTGACCACGCG +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQDTALL*LPADHA
Trigger: CGCGTGGTCAGCCGGCAGGCACAGGAGAGCCGTGTC...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGCCCACTGGCCGCGCGTaGCCGCCGCTTCCTGGATTT +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQPTGRA*PPLPGF
Trigger: AAATCCAGGAAGCGGCGGCCACGCGCGGCCAGTGGG...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAGACACGGCTCTCCTGTaGCTGCCGGCTGACCACGCG +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPDTALL*LPADHA
Trigger: CGCGTGGTCAGCCGGCAGGCACAGGAGAGCCGTGTC...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAATCCTCCGCGCCGCCTaGAGGCGAGTCCCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPILRAA*RRVPAK
Trigger: TTTGGCTGGGACTCGCCTTCAGGCGGCGCGGAGGAT...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGCACAAAAGCCCGACCTaGACCAGGCACAGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQHKSPT*TRHSSP
Trigger: CGGCGAGCTGTGCCTGGTGCAGGTCGGGCTTTTGTG...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGCTCTCGGAGAGGCGGTaGATCTCCTGCGAGACGCTG +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQLSERR*ISCETL
Trigger: CAGCGTCTCGCAGGAGATCCACCGCCTCTCCGAGAG...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGGAACCCCGGTATACCTaGGCCATGCTCTCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQEPRYT*AMLSER
Trigger: CCTCTCCGAGAGCATGGCCCAGGTATACCGGGGTTC...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGAGAGCCCGGCTTATCTaGGCTCTCCTCCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQRARLI*ALLPLL
Trigger: GAGGAGAGGGAGGAGAGCCCAGATAAGCCGGGCTCT...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCAGCCTGCTCCGGCCGTaGTGGTGCGGCCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSSLLRP*WCGPRP
Trigger: TGGACGAGGGCCGCACCATCACGGCCGGAGCAGGCT...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGCAGGCTGCTTTTGCTTaGGCGGGACTCGCGAGAGAA +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQQAAFA*AGLARE
Trigger: TTCTCTCGCGAGTCCCGCTCAAGCAAAAGCAGCCTG...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGGGGATCACATCGGGATaGACGTCCACGAAGGACACC +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQGITSG*TSTKDT
Trigger: GGTGTCCTTCGTGGACGTGCATCCCGATGTGATCCC...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCCGGCTCTCCTGTGCCTaGCGGCTGACCACGCGGCAG +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSRLSCA*RLTTRQ
Trigger: CTGCCGCGTGGTCAGCCGGCAGGCACAGGAGAGCCG...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAGAACCCCGGTATACCTaGGCCATGCTCTCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPEPRYT*AMLSER
Trigger: CCTCTCCGAGAGCATGGCCCAGGTATACCGGGGTTC...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGACACTCTTGGGAGAGTaGCACATTCGGTGGCACCGG +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQTLLGE*HIRWHR
Trigger: CCGGTGCCACCGAATGTGCCACTCTCCCAAGAGTGT...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTCCTGTGCCTGCCGGCTaGCCACGCGGCAGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTPVPAG*PRGSGA
Trigger: GGCACCGCTGCCGCGTGGTCAGCCGGCAGGCACAGG...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGCCATGGCGCCTTTTGTaGCACACTCTTGGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQPWRLL*HTLGRV
Trigger: CACTCTCCCAAGAGTGTGTCACAAAAGGCGCCATGG...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAAGTGGAGGGGAAGAATaGCGGCGAGGCCTTTTCTCG +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPSGGEE*RRGLFS
Trigger: CGAGAAAAGGCCTCGCCGGCATTCTTCCCCTCCACT...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCATGGGGATGGCACACTTaGGTTATGACCACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPWGWHT*VMTTAS
Trigger: GGAGGCCGTGGTCATAACCCAAGTGTGCCATCCCCA...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACTTCCGAGGGCAAATTaGAGAACTCTCTGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPLPRAN*RTLCAQ
Trigger: CTGGGCGCAGAGAGTTCTTCAATTTGCCCTCGGAAG...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACCCTGCAAGGAGCAATaGATGCACAACCCCGGCAAT +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPPCKEQ*MHNPGN
Trigger: ATTGCCGGGGTTGTGCATTCATTGCTCCTTGCAGGG...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCACCACGCGGCAGCGGTaGCACAAAAGCCCGACCTGC +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSTTRQR*HKSPTC
Trigger: GCAGGTCGGGCTTTTGTGGCACCGCTGCCGCGTGGT...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCAGGCGGTGGATCTCCTaGGAGACGCTGCGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSRRWIS*ETLRSW
Trigger: CCAGCTCCGCAGCGTCTCGCAGGAGATCCACCGCCT...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATGCGTCGAGCACATCTTaGCGGCGCGGCGCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYASSTS*RRGAAP
Trigger: GGGGGCCGCGCCGCGCCGTCAAGATGTGCTCGACGC...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTAGCCTGCTCCGGCCGTaGTGGTGCGGCCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTSLLRP*WCGPRP
Trigger: TGGACGAGGGCCGCACCATCACGGCCGGAGCAGGCT...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCGGCACACTTGGGTTATaGCCACGGCCTCCGTCACGC +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSGTLGL*PRPPSR
Trigger: GCGTGACGGAGGCCGTGGTCATAACCCAAGTGTGCC...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAGGTAGCTGCCTAAACTaGGGAAGCAGCATCCTTACG +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPGSCLN*GSSILT
Trigger: CGTAAGGATGCTGCTTCCTCAGTTTAGGCAGCTACC...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGAGGGCAGCTTCTGACTaGTTGGCCACAGCTATAGAT +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQRAASD*LATAID
Trigger: ATCTATAGCTGTGGCCAATCAGTCAGAAGCTGCCCT...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316081.11
ENST00000450697.1
ENST00000544460.5
CDS-3UTR TCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGTTCAAGGGCAGCTTCTaGCTGATTGGCCACAGCTAT +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQFKGSF*LIGHSY
Trigger: ATAGCTGTGGCCAATCAGTCAGAAGCTGCCCTTGAA...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316081.11
ENST00000450697.1
ENST00000544460.5
CDS-3UTR GCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCACCAGCCCCCACAGCTaGACCGGGATCACATCGGGA +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSTSPHS*TGITSG
Trigger: TCCCGATGTGATCCCGGTGCAGCTGTGGGGGCTGGT...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTAGGCGCCAGCGAGCCTaGTCCGGCCGTGATGGTGCG +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTRRQRA*SGRDGA
Trigger: CGCACCATCACGGCCGGAGCAGGCTCGCTGGCGCCT...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAAGGAATGGCCCAGAGTaGTTTTGGGTCCACACAGTC +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPRNGPE*FWVHTV
Trigger: GACTGTGTGGACCCAAAAGCACTCTGGGCCATTCCT...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGTCTGCTCCATGTAGATaGAATGACATCCTGCGCTGG +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQSAPCR*NDILRW
Trigger: CCAGCGCAGGATGTCATTGCATCTACATGGAGCAGA...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316081.11
ENST00000450697.1
ENST00000544460.5
CDS-3UTR TCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGAAATGGCATGCACTCTaGAAGGGGGTTAGCAAATCC +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQKWHAL*KGVSKS
Trigger: GGATTTGCTAACCCCCTTTCAGAGTGCATGCCATTT...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAAGGGCAGCTTCTGACTaGTTGGCCACAGCTATAGAT +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPRAASD*LATAID
Trigger: ATCTATAGCTGTGGCCAATCAGTCAGAAGCTGCCCT...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316081.11
ENST00000450697.1
ENST00000544460.5
CDS-3UTR GCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTCTCCTGCGAGACGCTaGGGAGCTGGCAGTGAATGC +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSSPARR*GAGSEC
Trigger: GCATTCACTGCCAGCTCCGCAGCGTCTCGCAGGAGA...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCGGTATACCTGGGCCATaGTCTCGGAGAGGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSGIPGP*SRRGGG
Trigger: TCCACCGCCTCTCCGAGAGCATGGCCCAGGTATACC...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCATCCAGGCCACAGGATaGACACGGAGAGCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSIQATG*TRRARL
Trigger: AAGCCGGGCTCTCCGTGTGCATCCTGTGGCCTGGAT...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGCAGCTGAGAGGAAGCTaGAGTGTAAATAGCTCCATG +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQQLRGS*SVNSSM
Trigger: CATGGAGCTATTTACACTGCAGCTTCCTCTCAGCTG...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCATCTGCTCCATGTAGATaGAATGACATCCTGCGCTGG +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPSAPCR*NDILRW
Trigger: CCAGCGCAGGATGTCATTGCATCTACATGGAGCAGA...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316081.11
ENST00000450697.1
ENST00000544460.5
CDS-3UTR GCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCATTGGTCTGCGTAAGATaGCACTTGTTCAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPLVCVR*HLFKGS
Trigger: GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAA...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316081.11
ENST00000450697.1
ENST00000544460.5
CDS-3UTR CCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGAGACTGAGATGTTTCTaGTTCCTCCTCCTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQRLRCF*FLLLCC
Trigger: GCAACAGAGGAGGAGGAACCAGAAACATCTCAGTCT...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGCACCATCCAGCTTACTaGCAGAGGAATAGAAACCAC +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQHHPAY*QRNRNH
Trigger: GTGGTTTCTATTCCTCTGCCAGTAAGCTGGATGGTG...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGCTCTCCGTAGTAAAGTaGTTTGAAACATGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQLSVVK*FETCPG
Trigger: CCCAGGGCATGTTTCAAACCACTTTACTACGGAGAG...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGTCTTTCCCTACTCTTTaGGATACAGCCTCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQSFPTL*DTASGG
Trigger: TCCACCTGAGGCTGTATCCCAAAGAGTAGGGAAAGA...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450697.1
CDS-3UTR TCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTCAGGTCACCGACCTGTaGCCGAGACCAGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTQVTDL*PRPASP
Trigger: GGGAGAGGCTGGTCTCGGTCACAGGTCGGTGACCTG...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCATGGGTTGTTGCTCCTTaGTCACAGCACGATACCATA +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPWVVAP*SQHDTI
Trigger: TATGGTATCGTGCTGTGATCAAGGAGCAACAACCCA...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTACCACGCGGCAGCGGTaGCACAAAAGCCCGACCTGC +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTTTRQR*HKSPTC
Trigger: GCAGGTCGGGCTTTTGTGGCACCGCTGCCGCGTGGT...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATAGGCGCCAGCGAGCCTaGTCCGGCCGTGATGGTGCG +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYRRQRA*SGRDGA
Trigger: CGCACCATCACGGCCGGAGCAGGCTCGCTGGCGCCT...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCAGACCAGGCTGCTTTTaGTTGAGCGGGACTCGCGAG +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSRPGCF*LSGTRE
Trigger: CTCGCGAGTCCCGCTCAAGCAAAAGCAGCCTGGTCT...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCGGAGCTGGCAGTGAATaGGGTGGGGATGGCACACTT +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSGAGSE*GGDGTL
Trigger: AAGTGTGCCATCCCCACCGCATTCACTGCCAGCTCC...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAACATGGAAAGGCTTaGATGGGAACCGACAGAAGT +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPQHGKA*MGTDRS
Trigger: ACTTCTGTCGGTTCCCATGCAAGCCTTTCCATGTTG...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGCTGAGAGGAAGCTaGAGTGTAAATAGCTCCATG +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPQLRGS*SVNSSM
Trigger: CATGGAGCTATTTACACTGCAGCTTCCTCTCAGCTG...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGGCTTGCTTCCATCACTaGTTTCTTCCTCAGAGAACA +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQACFHH*FLPQRT
Trigger: TGTTCTCTGAGGAAGAAAGCAGTGATGGAAGCAAGC...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316081.11
ENST00000450697.1
ENST00000544460.5
CDS-3UTR GCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGCTTAGTGGTGTCAGGTaGAAAGTCACTCATTCTGAG +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQLSGVR*KVTHSE
Trigger: CTCAGAATGAGTGACTTTGCACCTGACACCACTAAG...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTGGGGATGGCACACTTaGGTTATGACCACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSWGWHT*VMTTAS
Trigger: GGAGGCCGTGGTCATAACCCAAGTGTGCCATCCCCA...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAGAAGTTCAGAAGGAATaGCCCAGAGTGCTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPEVQKE*PRVLLG
Trigger: ACCCAAAAGCACTCTGGGCCATTCCTTCTGAACTTC...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAATGGAAAGGCTTGCATaGGAACCGACAGAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPMERLA*EPTEVQ
Trigger: CTGAACTTCTGTCGGTTCCCATGCAAGCCTTTCCAT...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCATTTGTGACACACTCTTaGGAGAGTGGCACATTCGGT +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPFVTHS*ESGTFG
Trigger: ACCGAATGTGCCACTCTCCCAAGAGTGTGTCACAAA...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGTCATCTAAAGGCAGCTaGGCTGTAGGTAGTTCTAGT +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQSSKGS*AVGSSS
Trigger: ACTAGAACTACCTACAGCCCAGCTGCCTTTAGATGA...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGACCCCTTTTCTCAGGTaGACTCTTATCCAATTTGGG +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQTPFLR*TLIQFG
Trigger: CCCAAATTGGATAAGAGTCCACCTGAGAAAAGGGGT...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316081.11
CDS-3UTR CCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGTTTACAGTCTTTTGTTaGTGGCGCATGCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQFTVFC*WRMLML
Trigger: CAGCATCAGCATGCGCCACCAACAAAAGACTGTAAA...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAGGATACAGCCTCAGGTaGACTCTTATCCAATTTGGG +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPGYSLR*TLIQFG
Trigger: CCCAAATTGGATAAGAGTCCACCTGAGGCTGTATCC...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450697.1
CDS-3UTR TCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTGCACCTCCTTGCCCTaGAGGTTGCTAAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSCTSLP*RLLRKS
Trigger: GGACTTCCTTAGCAACCTTCAGGGCAAGGAGGTGCA...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGCATTTTCTTTCCACTTaGCACAGCAAAGGTCATCAG +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQHFLST*HSKGHQ
Trigger: CTGATGACCTTTGCTGTGTCAAGTGGAAAGAAAATG...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAGACTCCAAAGGCTTCTaGAGTTTTACTGGTCTTGCA +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPDSKGF*SFTGLA
Trigger: TGCAAGACCAGTAAAACTTCAGAAGCCTTTGGAGTC...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCCCATGGCGCCTTTTGTaGCACACTCTTGGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSPWRLL*HTLGRV
Trigger: CACTCTCCCAAGAGTGTGTCACAAAAGGCGCCATGG...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGCTCCTCCATACCATTTaGAAGGTTCAAAACCCTTGT +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQLLHTI*KVQNPC
Trigger: ACAAGGGTTTTGAACCTTTCAAATGGTATGGAGGAG...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000450697.1
CDS-3UTR TCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAACCCCACCATCAACCTaGGACCTAATTTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPTPPST*DLICFP
Trigger: TGGAAAACAAATTAGGTCTCAGGTTGATGGTGGGGT...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGAAATATCAGCCAGGGTaGACTTCACAGCCAATATTG +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQKYQPG*TSQPIL
Trigger: CAATATTGGCTGTGAAGTGCACCCTGGCTGATATTT...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGGAACATCTGACAGCTTaGATGGGCAAAAGTAAGACA +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQEHLTA*MGKSKT
Trigger: TGTCTTACTTTTGCCCATGCAAGCTGTCAGATGTTC...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAGAACAAAGGCATCAATaGCGAAATGGCATCCCTGTT +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPEQRHQ*RNGIPV
Trigger: AACAGGGATGCCATTTCGGCATTGATGCCTTTGTTC...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316081.11
ENST00000450697.1
ENST00000544460.5
CDS-3UTR GCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAGCTTGCTTCCATCACTaGTTTCTTCCTCAGAGAACA +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPACFHH*FLPQRT
Trigger: TGTTCTCTGAGGAAGAAAGCAGTGATGGAAGCAAGC...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316081.11
ENST00000450697.1
ENST00000544460.5
CDS-3UTR GCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGAATACTCTGTTGGTCTaGGTAAGATGCCACTTGTTC +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQNTLLV*VRCHLF
Trigger: GAACAAGTGGCATCTTACGCAGACCAACAGAGTATT...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGCCAGTGAAAACCTGTTaGAATGATACAAGACTCCCT +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQPVKTC*NDTRLP
Trigger: AGGGAGTCTTGTATCATTGCAACAGGTTTTCACTGG...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTAGGAGGACCAGGCGATaGAGCAGCAGCACGTCCAGG +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTRRTRR*SSSTSR
Trigger: CCTGGACGTGCTGCTGCTCCATCGCCTGGTCCTCCT...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGCAAATTCCTGATACTTaGCATATCCAGCTTGGGCAA +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQQIPDT*HIQLGQ
Trigger: TTGCCCAAGCTGGATATGCCAAGTATCAGGAATTTG...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCATTCCATCAGTATACTTaGCAAGGCACAAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPFHQYT*QGTRFQ
Trigger: CTGGAACCTTGTGCCTTGCCAAGTATACTGATGGAA...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAACAGTCTTTTGTTGGTaGCGCATGCTGATGCTGAAA +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPTVFCW*RMLMLK
Trigger: TTTCAGCATCAGCATGCGCCACCAACAAAAGACTGT...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATCAGGTCACCGACCTGTaGCCGAGACCAGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYQVTDL*PRPASP
Trigger: GGGAGAGGCTGGTCTCGGTCACAGGTCGGTGACCTG...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACTTCTCCATACAGGCTaGCATAATACACATGCTCAA +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPLLHTG*HNTHAQ
Trigger: TTGAGCATGTGTATTATGTCAGCCTGTATGGAGAAG...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGTGTCATCCAATTTGGTaGCTATGGCCCTATAATAAC +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQCHPIW*LWPYNN
Trigger: GTTATTATAGGGCCATAGTCACCAAATTGGATGACA...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGTTCTTCCCCTGTTCTTaGTTCGTCAAGAATCTCAAT +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQFFPCS*FVKNLN
Trigger: ATTGAGATTCTTGACGAATCAAGAACAGGGGAAGAA...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGATAATGAACATCTaGCAGCTTGCATGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPQIMNI*QLAWAK
Trigger: TTTTGCCCATGCAAGCTGTCAGATGTTCATTATCTG...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGTCTACTTCTAAACACTaGAGTTTCTCCGTATCAGCA +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQSTSKH*SFSVSA
Trigger: TGCTGATACGGAGAAACTTCAGTGTTTAGAAGTAGA...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGGATTCCTGTGCTTTCTaGCTAACTCCTAAAGACAAA +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQDSCAF*LTPKDK
Trigger: TTTGTCTTTAGGAGTTAGTCAGAAAGCACAGGAATC...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGAGTGGTATCACCCACTaGCATGAAGTAAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQSGITH*HEVKIF
Trigger: AAAGATCTTTACTTCATGTCAGTGGGTGATACCACT...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450697.1
CDS-3UTR GCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATAGGCGGTGGATCTCCTaGGAGACGCTGCGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYRRWIS*ETLRSW
Trigger: CCAGCTCCGCAGCGTCTCGCAGGAGATCCACCGCCT...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTGGTATACCTGGGCCATaGTCTCGGAGAGGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTGIPGP*SRRGGG
Trigger: TCCACCGCCTCTCCGAGAGCATGGCCCAGGTATACC...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGCCACATTTTCCGAATTaGCTCGGTCAACTAAGAATA +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQPHFPN*LGQLRI
Trigger: TATTCTTAGTTGACCGAGGCAATTCGGAAAATGTGG...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAAGTAGCTTCTACTCTTaGTGTTTTCAAGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPSSFYS*CFQGCL
Trigger: GAGACACCCTTGAAAACAGCAAGAGTAGAAGCTACT...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGTATCCAATTTGGGTATaGCATTCCAGACATTCTCAG +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQYPIWV*HSRHSQ
Trigger: CTGAGAATGTCTGGAATGGCATACCCAAATTGGATA...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000450697.1
CDS-3UTR CCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGTGCATCACTAGGTATTaGAAGCAGATCATCACTTGT +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQCITRY*KQIITC
Trigger: ACAAGTGATGATCTGCTTCCAATACCTAGTGATGCA...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGGCATCAATGCCGAAATaGCATCCCTGTTTTTATACT +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQASMPK*HPCFYT
Trigger: AGTATAAAAACAGGGATGCCATTTCGGCATTGATGC...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316081.11
ENST00000450697.1
ENST00000544460.5
CDS-3UTR TCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACTACAAATGTTACATTaGCATGCTCCACAGACTGTA +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPLQMLH*HAPQTV
Trigger: TACAGTCTGTGGAGCATGTCAATGTAACATTTGTAG...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGTATGATGAGTTGATCTaGGGTTTATATGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQYDELI*GLYDSS
Trigger: GGAAGAGTCATATAAACCTCAGATCAACTCATCATA...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGCCTTGTATGATGAGTTaGTCTGAGGTTTATATGACT +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQPCMMS*SEVYMT
Trigger: AGTCATATAAACCTCAGATCAACTCATCATACAAGG...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCAGGGCAGCTTCTGACTaGTTGGCCACAGCTATAGAT +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSRAASD*LATAID
Trigger: ATCTATAGCTGTGGCCAATCAGTCAGAAGCTGCCCT...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCATATCACCCACTGACATaGAGTAAAGATCTTTCCCTA +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPYHPLT*SKDLSL
Trigger: TAGGGAAAGATCTTTACTTCATGTCAGTGGGTGATA...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450697.1
CDS-3UTR GCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTGGGATCACATCGGGATaGACGTCCACGAAGGACACC +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTGITSG*TSTKDT
Trigger: GGTGTCCTTCGTGGACGTGCATCCCGATGTGATCCC...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATCACAAAAGCCCGACCTaGACCAGGCACAGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYHKSPT*TRHSSP
Trigger: CGGCGAGCTGTGCCTGGTGCAGGTCGGGCTTTTGTG...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTAGACCAGGCTGCTTTTaGTTGAGCGGGACTCGCGAG +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTRPGCF*LSGTRE
Trigger: CTCGCGAGTCCCGCTCAAGCAAAAGCAGCCTGGTCT...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTGGAGCTGGCAGTGAATaGGGTGGGGATGGCACACTT +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTGAGSE*GGDGTL
Trigger: AAGTGTGCCATCCCCACCGCATTCACTGCCAGCTCC...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGGCTAATCATATCATCTaGTATGATCCCATGTTCATC +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQANHII*YDPMFI
Trigger: GATGAACATGGGATCATAGCAGATGATATGATTAGC...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGAACCATTATTGTGCTTaGTTCCATCACTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQNHYCA*FHHCFL
Trigger: AAGAAAGCAGTGATGGAAGCAAGCACAATAATGGTT...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316081.11
ENST00000450697.1
ENST00000544460.5
CDS-3UTR GCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTGGTCTGCGTAAGATaGCACTTGTTCAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSLVCVR*HLFKGS
Trigger: GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAA...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGATCTTCTCTGAGCTTTaGTTCTGGCAATTCACATTA +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQIFSEL*FWQFTL
Trigger: TAATGTGAATTGCCAGAAGCAAAGCTCAGAGAAGAT...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTGTTCAAAGGACCCAGTaGAGGGGAAGAATGCCGGCG +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTVQRTQ*RGRMPA
Trigger: CGCCGGCATTCTTCCCCTCCACTGGGTCCTTTGAAC...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCATTGGCATATCCAGCTTaGGCAATTACCTTACTAATG +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPLAYPA*AITLLM
Trigger: CATTAGTAAGGTAATTGCCCAAGCTGGATATGCCAA...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGCTTCTGAAGTTTTACTaGTCTTGCAAGTCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQLLKFY*SCKSLF
Trigger: GAAAAGAGACTTGCAAGACCAGTAAAACTTCAGAAG...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAGACTCTTATCCAATTTaGGTATGCCATTCCAGACAT +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPDSYPI*VCHSRH
Trigger: ATGTCTGGAATGGCATACCCAAATTGGATAAGAGTC...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000450697.1
CDS-3UTR CCA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGTCAGCACAGGATTGGTaGTACTACACAATTTCAAAT +
Preference number: 4 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQSAQDW*YYTISN
Trigger: ATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGA...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTCTTCCGAGGGCAAATTaGAGAACTCTCTGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTLPRAN*RTLCAQ
Trigger: CTGGGCGCAGAGAGTTCTTCAATTTGCCCTCGGAAG...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTCCCTGCAAGGAGCAATaGATGCACAACCCCGGCAAT +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTPCKEQ*MHNPGN
Trigger: ATTGCCGGGGTTGTGCATTCATTGCTCCTTGCAGGG...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCGGCAGCTCTTCTCTTTaGCTTTTGGTCACGGTAAGA +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSGSSSL*LLVTVR
Trigger: TCTTACCGTGACCAAAAGTCAAAGAGAAGAGCTGCC...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATATCCAGGCCACAGGATaGACACGGAGAGCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYIQATG*TRRARL
Trigger: AAGCCGGGCTCTCCGTGTGCATCCTGTGGCCTGGAT...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCAAGTGGTTTGAAACATaGCCTGGGGAGTGGGCATTT +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSKWFET*PGEWAF
Trigger: AAATGCCCACTCCCCAGGGCATGTTTCAAACCACTT...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAGCTAATCATATCATCTaGTATGATCCCATGTTCATC +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPANHII*YDPMFI
Trigger: GATGAACATGGGATCATAGCAGATGATATGATTAGC...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAAACCATTATTGTGCTTaGTTCCATCACTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPNHYCA*FHHCFL
Trigger: AAGAAAGCAGTGATGGAAGCAAGCACAATAATGGTT...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316081.11
ENST00000450697.1
ENST00000544460.5
CDS-3UTR CCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTAGCTCCCGCATCTGTTaGAACACATCAGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTSSRIC*NTSGTS
Trigger: GGAGGTGCCTGATGTGTTCCAACAGATGCGGGAGCT...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATAGAGCCCGGCTTATCTaGGCTCTCCTCCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYRARLI*ALLPLL
Trigger: GAGGAGAGGGAGGAGAGCCCAGATAAGCCGGGCTCT...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATACCTGGGCACAGCGCTaGGGCCGAAAAGTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYTWAQR*GRKVSS
Trigger: GCTTGAGACTTTTCGGCCCCAGCGCTGTGCCCAGGT...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCATTTACTAGAGGAGCCTaGCTTAATTTCCAAGCAATT +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPFTRGA*LNFQAI
Trigger: AATTGCTTGGAAATTAAGCCAGGCTCCTCTAGTAAA...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCATCAGCACAGGATTGGTaGTACTACACAATTTCAAAT +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPSAQDW*YYTISN
Trigger: ATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGA...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATCAGGCTGCTTTTGCTTaGGCGGGACTCGCGAGAGAA +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYQAAFA*AGLARE
Trigger: TTCTCTCGCGAGTCCCGCTCAAGCAAAAGCAGCCTG...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATTCTGTTGCCTGGCTCTaGAGGACTCGGTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYSVAWL*RTRSAK
Trigger: CTTGGCTGACCGAGTCCTTCAGAGCCAGGCAACAGA...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCGACTCCAAAGGCTTCTaGAGTTTTACTGGTCTTGCA +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSDSKGF*SFTGLA
Trigger: TGCAAGACCAGTAAAACTTCAGAAGCCTTTGGAGTC...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTCCGTATCAGCAAACTaGCACCAAAAGTACTCAGGT +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSSVSAN*HQKYSG
Trigger: ACCTGAGTACTTTTGGTGTCAGTTTGCTGATACGGA...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATAGTGGAGGGGAAGAATaGCGGCGAGGCCTTTTCTCG +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYSGGEE*RRGLFS
Trigger: CGAGAAAAGGCCTCGCCGGCATTCTTCCCCTCCACT...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACTTTTCACTTTTTCCTaGACAACTAGTTCAGTTGAA +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPLFTFS*TTSSVE
Trigger: TTCAACTGAACTAGTTGTGCAGGAAAAAGTGAAAAG...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAAAGTTTTACTGGTCTTaGAAGTCTCTTTTCTACCAA +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPKFYWS*KSLFYQ
Trigger: TTGGTAGAAAAGAGACTTGCAAGACCAGTAAAACTT...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCCTTAGTGGTGTCAGGTaGAAAGTCACTCATTCTGAG +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSLSGVR*KVTHSE
Trigger: CTCAGAATGAGTGACTTTGCACCTGACACCACTAAG...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATGTTCAAAGGACCCAGTaGAGGGGAAGAATGCCGGCG +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYVQRTQ*RGRMPA
Trigger: CGCCGGCATTCTTCCCCTCCACTGGGTCCTTTGAAC...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCGTCCTTGTATGTTCCTaGTCAGCTGACACCAGAAAT +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSVLVCS*SADTRN
Trigger: ATTTCTGGTGTCAGCTGACCAGGAACATACAAGGAC...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACATTATAGTCTTCTGTaGGAACTCACAAAATTTCAG +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPHYSLL*ELTKFQ
Trigger: CTGAAATTTTGTGAGTTCCCACAGAAGACTATAATG...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTATTGCAGCCTCGCTaGTCCGTTGGGAAAAGTAAT +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSLLQPR*SVGKSN
Trigger: ATTACTTTTCCCAACGGACCAGCGAGGCTGCAATAA...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCATTTATACCACTCATTTaGTACCCTAGTCCTATCTTA +
Preference number: 4 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPFIPLI*YPSPIL
Trigger: TAAGATAGGACTAGGGTACCAAATGAGTGGTATAAA...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATTGCACCTCCTTGCCCTaGAGGTTGCTAAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYCTSLP*RLLRKS
Trigger: GGACTTCCTTAGCAACCTTCAGGGCAAGGAGGTGCA...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCCATTTTCTTTCCACTTaGCACAGCAAAGGTCATCAG +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSHFLST*HSKGHQ
Trigger: CTGATGACCTTTGCTGTGTCAAGTGGAAAGAAAATG...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTAGTACCGAAGGCTGCTaGAACTCACTAACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTSTEGC*NSLTPS
Trigger: GGAAGGAGTTAGTGAGTTGCAGCAGCCTTCGGTACT...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTGCAAGTACCGAAGGCTaGTGCAACTCACTAACTCCT +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTASTEG*CNSLTP
Trigger: AGGAGTTAGTGAGTTGCAGCAGCCTTCGGTACTTGC...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCAAATATCAGCCAGGGTaGACTTCACAGCCAATATTG +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSKYQPG*TSQPIL
Trigger: CAATATTGGCTGTGAAGTGCACCCTGGCTGATATTT...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTATCCCACTAATAAGTaGTCTGGACCACTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSYPTNK*SGPLSV
Trigger: AACAGACAGTGGTCCAGAGCACTTATTAGTGGGATA...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCGAACATCTGACAGCTTaGATGGGCAAAAGTAAGACA +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSEHLTA*MGKSKT
Trigger: TGTCTTACTTTTGCCCATGCAAGCTGTCAGATGTTC...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTTCTGCTCCATGTAGATaGAATGACATCCTGCGCTGG +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTSAPCR*NDILRW
Trigger: CCAGCGCAGGATGTCATTGCATCTACATGGAGCAGA...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTTCCCCTGTTCTTaGTTCGTCAAGAATCTCAAT +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSFFPCS*FVKNLN
Trigger: ATTGAGATTCTTGACGAATCAAGAACAGGGGAAGAA...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTAAATGGCATGCACTCTaGAAGGGGGTTAGCAAATCC +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTKWHAL*KGVSKS
Trigger: GGATTTGCTAACCCCCTTTCAGAGTGCATGCCATTT...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCCAAAGTCCACAAGCCTaGCAGATACAAGATAATCTT +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSQSPQA*QIQDNL
Trigger: AAGATTATCTTGTATCTGTCAGGCTTGTGGACTTTG...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTAAGTGGTTTGAAACATaGCCTGGGGAGTGGGCATTT +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTKWFET*PGEWAF
Trigger: AAATGCCCACTCCCCAGGGCATGTTTCAAACCACTT...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCAATGTTACATTGACATaGTCCACAGACTGTATCCCA +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSNVTLT*STDCIP
Trigger: TGGGATACAGTCTGTGGAGCATGTCAATGTAACATT...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTAGGTCATTGGGTTGTTaGTCCTTGATCACAGCACGA +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTRSLGC*SLITAR
Trigger: TCGTGCTGTGATCAAGGAGCAACAACCCAATGACCT...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTGCAAGGAGCAATGAATaGACAACCCCGGCAATATTG +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTARSNE*TTPAIL
Trigger: CAATATTGCCGGGGTTGTGCATTCATTGCTCCTTGC...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATAGGAATGGCCCAGAGTaGTTTTGGGTCCACACAGTC +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYRNGPE*FWVHTV
Trigger: GACTGTGTGGACCCAAAAGCACTCTGGGCCATTCCT...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTGGCATATCCAGCTTaGGCAATTACCTTACTAATG +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSLAYPA*AITLLM
Trigger: CATTAGTAAGGTAATTGCCCAAGCTGGATATGCCAA...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTCTCTCCGTAGTAAAGTaGTTTGAAACATGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTLSVVK*FETCPG
Trigger: CCCAGGGCATGTTTCAAACCACTTTACTACGGAGAG...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTGAAGTTCAGAAGGAATaGCCCAGAGTGCTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTEVQKE*PRVLLG
Trigger: ACCCAAAAGCACTCTGGGCCATTCCTTCTGAACTTC...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCGTTTCAGCACAGGATTaGTGGTACTACACAATTTCA +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSVSAQD*WYYTIS
Trigger: TGAAATTGTGTAGTACCACCAATCCTGTGCTGAAAC...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCCCTTGTATGATGAGTTaGTCTGAGGTTTATATGACT +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSPCMMS*SEVYMT
Trigger: AGTCATATAAACCTCAGATCAACTCATCATACAAGG...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCCCTATTTTGTTAGTATaGACCACAGAAACATTGCCA +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSPILLV*TTETLP
Trigger: TGGCAATGTTTCTGTGGTTCATACTAACAAAATAGG...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTAGTCTCAAGCAACAGTaGTCTGTACCAATGTCCATC +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTSLKQQ*SVPMSI
Trigger: GATGGACATTGGTACAGAGCACTGTTGCTTGAGACT...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATAGTACCGAAGGCTGCTaGAACTCACTAACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYSTEGC*NSLTPS
Trigger: GGAAGGAGTTAGTGAGTTGCAGCAGCCTTCGGTACT...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATGCAAGTACCGAAGGCTaGTGCAACTCACTAACTCCT +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYASTEG*CNSLTP
Trigger: AGGAGTTAGTGAGTTGCAGCAGCCTTCGGTACTTGC...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTCAACCCCGGCAATATTaGATTAACAAGGTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTQPRQY*INKVKP
Trigger: AGGCTTGACCTTGTTAATGCAATATTGCCGGGGTTG...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTTATCATCAAACTCTaGTTTGTCAACCAGATGGCA +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSFIIKL*FVNQMA
Trigger: TGCCATCTGGTTGACAAAGCAGAGTTTGATGATAAA...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTGAACAAAGGCATCAATaGCGAAATGGCATCCCTGTT +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTEQRHQ*RNGIPV
Trigger: AACAGGGATGCCATTTCGGCATTGATGCCTTTGTTC...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCATCTTCTCTGAGCTTTaGTTCTGGCAATTCACATTA +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSIFSEL*FWQFTL
Trigger: TAATGTGAATTGCCAGAAGCAAAGCTCAGAGAAGAT...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTAAGGAAACTGCCTCCTaGCTCCAAGTTTTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTKETAS*LQVFPK
Trigger: TTTGGGAAAAACTTGGAGCCAGGAGGCAGTTTCCTT...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTTTCCATCAGTATACTTaGCAAGGCACAAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTFHQYT*QGTRFQ
Trigger: CTGGAACCTTGTGCCTTGCCAAGTATACTGATGGAA...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTTTATTGCAGCCTCGCTaGTCCGTTGGGAAAAGTAAT +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTLLQPR*SVGKSN
Trigger: ATTACTTTTCCCAACGGACCAGCGAGGCTGCAATAA...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTCCAATATAAGGACATaGGATACAATTTCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSSNIRT*DTISPV
Trigger: GACAGGAGAAATTGTATCCCATGTCCTTATATTGGA...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTTCATCTAAAGGCAGCTaGGCTGTAGGTAGTTCTAGT +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTSSKGS*AVGSSS
Trigger: ACTAGAACTACCTACAGCCCAGCTGCCTTTAGATGA...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTTGTCCTCAGTACACATaGATTCCTGTGCTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTCPQYT*IPVLSD
Trigger: GTCAGAAAGCACAGGAATCCATGTGTACTGAGGACA...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTTCTAAAATAGTCTCCTaGAACCACACCACCACTTCT +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTSKIVS*NHTTTS
Trigger: AGAAGTGGTGGTGTGGTTTCAGGAGACTATTTTAGA...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATTGGGTTGTTGCTCCTTaGTCACAGCACGATACCATA +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYWVVAP*SQHDTI
Trigger: TATGGTATCGTGCTGTGATCAAGGAGCAACAACCCA...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATGGCAGCTCTTCTCTTTaGCTTTTGGTCACGGTAAGA +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYGSSSL*LLVTVR
Trigger: TCTTACCGTGACCAAAAGTCAAAGAGAAGAGCTGCC...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTCAGGCAAAATCCCAGTaGAAACCTGTTGCAATGATA +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTQAKSQ*KPVAMI
Trigger: TATCATTGCAACAGGTTTTCACTGGGATTTTGCCTG...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTTTGCATTCACTGCCTTaGCTAGTATCAGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTLHSLP*LVSVSS
Trigger: TGAAGACACTGATACTAGGCAAGGCAGTGAATGCAA...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTGCACCTAAAAGCCTGTaGCTTAACCTTCAGAAATTC +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTAPKSL*LNLQKF
Trigger: GAATTTCTGAAGGTTAAGGCACAGGCTTTTAGGTGC...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCAAGTTTTACTGGTCTTaGAAGTCTCTTTTCTACCAA +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSKFYWS*KSLFYQ
Trigger: TTGGTAGAAAAGAGACTTGCAAGACCAGTAAAACTT...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATGCAAGGAGCAATGAATaGACAACCCCGGCAATATTG +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYARSNE*TTPAIL
Trigger: CAATATTGCCGGGGTTGTGCATTCATTGCTCCTTGC...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATCAACATGGAAAGGCTTaGATGGGAACCGACAGAAGT +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYQHGKA*MGTDRS
Trigger: ACTTCTGTCGGTTCCCATGCAAGCCTTTCCATGTTG...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTCCAGTGAAAACCTGTTaGAATGATACAAGACTCCCT +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTPVKTC*NDTRLP
Trigger: AGGGAGTCTTGTATCATTGCAACAGGTTTTCACTGG...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATAGACTGAGATGTTTCTaGTTCCTCCTCCTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYRLRCF*FLLLCC
Trigger: GCAACAGAGGAGGAGGAACCAGAAACATCTCAGTCT...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATCACCATCCAGCTTACTaGCAGAGGAATAGAAACCAC +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYHHPAY*QRNRNH
Trigger: GTGGTTTCTATTCCTCTGCCAGTAAGCTGGATGGTG...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATTTTGTGACACACTCTTaGGAGAGTGGCACATTCGGT +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYFVTHS*ESGTFG
Trigger: ACCGAATGTGCCACTCTCCCAAGAGTGTGTCACAAA...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCATGTTTAAAAAGTCATaGGCTTCAAAGTTAGGTAGG +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSMFKKS*ASKLGR
Trigger: CCTACCTAACTTTGAAGCCCATGACTTTTTAAACAT...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTTATACCACTCATTTaGTACCCTAGTCCTATCTTA +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSFIPLI*YPSPIL
Trigger: TAAGATAGGACTAGGGTACCAAATGAGTGGTATAAA...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCATCTACTATGGGCAGTaGAGTTTAATTATAGCAACA +
Preference number: 4 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSIYYGQ*SLIIAT
Trigger: TGTTGCTATAATTAAACTCCACTGCCCATAGTAGAT...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTTGTCATCCAATTTGGTaGCTATGGCCCTATAATAAC +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTCHPIW*LWPYNN
Trigger: GTTATTATAGGGCCATAGTCACCAAATTGGATGACA...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTCAACATAAGACACTCTaGCTTCTACTGTACTTCCAA +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTQHKTL*LLLYFQ
Trigger: TTGGAAGTACAGTAGAAGTCAGAGTGTCTTATGTTG...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATTCCGTATCAGCAAACTaGCACCAAAAGTACTCAGGT +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYSVSAN*HQKYSG
Trigger: ACCTGAGTACTTTTGGTGTCAGTTTGCTGATACGGA...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTTCTACTTCTAAACACTaGAGTTTCTCCGTATCAGCA +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTSTSKH*SFSVSA
Trigger: TGCTGATACGGAGAAACTTCAGTGTTTAGAAGTAGA...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATAGTCTCAAGCAACAGTaGTCTGTACCAATGTCCATC +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYSLKQQ*SVPMSI
Trigger: GATGGACATTGGTACAGAGCACTGTTGCTTGAGACT...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTAATGTTACATTGACATaGTCCACAGACTGTATCCCA +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTNVTLT*STDCIP
Trigger: TGGGATACAGTCTGTGGAGCATGTCAATGTAACATT...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATCAACCCCGGCAATATTaGATTAACAAGGTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYQPRQY*INKVKP
Trigger: AGGCTTGACCTTGTTAATGCAATATTGCCGGGGTTG...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATAAATTCACATCTTATTaGAGCCTCGCTGGTCCGTTG +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYKFTSY*SLAGPL
Trigger: CAACGGACCAGCGAGGCTGCAATAAGATGTGAATTT...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATGAACAAAGGCATCAATaGCGAAATGGCATCCCTGTT +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYEQRHQ*RNGIPV
Trigger: AACAGGGATGCCATTTCGGCATTGATGCCTTTGTTC...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTTATCCAATTTGGGTATaGCATTCCAGACATTCTCAG +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTYPIWV*HSRHSQ
Trigger: CTGAGAATGTCTGGAATGGCATACCCAAATTGGATA...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316081.11
CDS-3UTR CCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATAAGGAAACTGCCTCCTaGCTCCAAGTTTTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYKETAS*LQVFPK
Trigger: TTTGGGAAAAACTTGGAGCCAGGAGGCAGTTTCCTT...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTCTCCTTCTCCAGTCTTaGCAAAAGGTATTTTGTTAC +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTLLLQS*QKVFCY
Trigger: GTAACAAAATACCTTTTGCCAAGACTGGAGAAGGAG...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATGCTTTGTCAACCAGATaGCACTCTAATTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYALSTR*HSNSPS
Trigger: GGAAGGTGAATTAGAGTGCCATCTGGTTGACAAAGC...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATTGTCCTCAGTACACATaGATTCCTGTGCTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYCPQYT*IPVLSD
Trigger: GTCAGAAAGCACAGGAATCCATGTGTACTGAGGACA...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTGACTCTTATCCAATTTaGGTATGCCATTCCAGACAT +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTDSYPI*VCHSRH
Trigger: ATGTCTGGAATGGCATACCCAAATTGGATAAGAGTC...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316081.11
CDS-3UTR CCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATTTTACAGTCTTTTGTTaGTGGCGCATGCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYFTVFC*WRMLML
Trigger: CAGCATCAGCATGCGCCACCAACAAAAGACTGTAAA...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTGTTTCAGCACAGGATTaGTGGTACTACACAATTTCA +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTVSAQD*WYYTIS
Trigger: TGAAATTGTGTAGTACCACCAATCCTGTGCTGAAAC...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATCAGATAATGAACATCTaGCAGCTTGCATGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYQIMNI*QLAWAK
Trigger: TTTTGCCCATGCAAGCTGTCAGATGTTCATTATCTG...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATTCTAAAATAGTCTCCTaGAACCACACCACCACTTCT +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYSKIVS*NHTTTS
Trigger: AGAAGTGGTGGTGTGGTTTCAGGAGACTATTTTAGA...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTTATGATGAGTTGATCTaGGGTTTATATGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTYDELI*GLYDSS
Trigger: GGAAGAGTCATATAAACCTCAGATCAACTCATCATA...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATCTAATGCATCTTCTCTaGGCTTTGCTTCTGGCAATT +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYLMHLL*ALLLAI
Trigger: AATTGCCAGAAGCAAAGCTCAGAGAAGATGCATTAG...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATGCACCTAAAAGCCTGTaGCTTAACCTTCAGAAATTC +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYAPKSL*LNLQKF
Trigger: GAATTTCTGAAGGTTAAGGCACAGGCTTTTAGGTGC...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTCTTTCTCTATTACTATaGCCCTATACCAGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTLSLLL*PYTSFH
Trigger: ATGGAAACTGGTATAGGGGCATAGTAATAGAGAAAG...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATAGTAGCTTCTACTCTTaGTGTTTTCAAGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYSSFYS*CFQGCL
Trigger: GAGACACCCTTGAAAACAGCAAGAGTAGAAGCTACT...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATCAAATTCCTGATACTTaGCATATCCAGCTTGGGCAA +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYQIPDT*HIQLGQ
Trigger: TTGCCCAAGCTGGATATGCCAAGTATCAGGAATTTG...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTCTTCTGAAGTTTTACTaGTCTTGCAAGTCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTLLKFY*SCKSLF
Trigger: GAAAAGAGACTTGCAAGACCAGTAAAACTTCAGAAG...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTATTCTAGGTAGAATTTaGCAGCTCTTCTCTTTGACT +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTILGRI*QLFSLT
Trigger: AGTCAAAGAGAAGAGCTGCCAAATTCTACCTAGAAT...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATCAACATAAGACACTCTaGCTTCTACTGTACTTCCAA +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYQHKTL*LLLYFQ
Trigger: TTGGAAGTACAGTAGAAGTCAGAGTGTCTTATGTTG...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATCTACAAATGTTACATTaGCATGCTCCACAGACTGTA +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYLQMLH*HAPQTV
Trigger: TACAGTCTGTGGAGCATGTCAATGTAACATTTGTAG...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATCAAAGTCCACAAGCCTaGCAGATACAAGATAATCTT +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYQSPQA*QIQDNL
Trigger: AAGATTATCTTGTATCTGTCAGGCTTGTGGACTTTG...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTGAGCAGCTGTATTTTTaGAATAGTACTGAATATCAG +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTEQLYF*NSTEYQ
Trigger: CTGATATTCAGTACTATTGCAAAAATACAGCTGCTC...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATTGCATCACTAGGTATTaGAAGCAGATCATCACTTGT +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYCITRY*KQIITC
Trigger: ACAAGTGATGATCTGCTTCCAATACCTAGTGATGCA...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTCATTATAGTCTTCTGTaGGAACTCACAAAATTTCAG +
Preference number: 4 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTHYSLL*ELTKFQ
Trigger: CTGAAATTTTGTGAGTTCCCACAGAAGACTATAATG...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATGCATCAATGCCGAAATaGCATCCCTGTTTTTATACT +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYASMPK*HPCFYT
Trigger: AGTATAAAAACAGGGATGCCATTTCGGCATTGATGC...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR TCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATCCTATTTTGTTAGTATaGACCACAGAAACATTGCCA +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYPILLV*TTETLP
Trigger: TGGCAATGTTTCTGTGGTTCATACTAACAAAATAGG...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATTTTACTAGAGGAGCCTaGCTTAATTTCCAAGCAATT +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYFTRGA*LNFQAI
Trigger: AATTGCTTGGAAATTAAGCCAGGCTCCTCTAGTAAA...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATTCCAATATAAGGACATaGGATACAATTTCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYSNIRT*DTISPV
Trigger: GACAGGAGAAATTGTATCCCATGTCCTTATATTGGA...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATGTCACGGAAGTTACTTaGTTTGGTTCCAATAATGTT +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYVTEVT*FGSNNV
Trigger: AACATTATTGGAACCAAACCAAGTAACTTCCGTGAC...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATATTCTAGGTAGAATTTaGCAGCTCTTCTCTTTGACT +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYILGRI*QLFSLT
Trigger: AGTCAAAGAGAAGAGCTGCCAAATTCTACCTAGAAT...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATCTTTTCACTTTTTCCTaGACAACTAGTTCAGTTGAA +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYLFTFS*TTSSVE
Trigger: TTCAACTGAACTAGTTGTGCAGGAAAAAGTGAAAAG...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR GCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATGAGCAGCTGTATTTTTaGAATAGTACTGAATATCAG +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYEQLYF*NSTEYQ
Trigger: CTGATATTCAGTACTATTGCAAAAATACAGCTGCTC...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CCA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATATCTACTATGGGCAGTaGAGTTTAATTATAGCAACA +
Preference number: 4 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYIYYGQ*SLIIAT
Trigger: TGTTGCTATAATTAAACTCCACTGCCCATAGTAGAT...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CCA 90 bp GAGGCGCTGCCCAGCGCCCACTGGCCGCGCGTGGCCGCCGCTTCCTaGATTTCCCGGCTCAGCCGCAGGTACTCGCCCCGCCGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: EALPSAHWPRVAAAS*ISRLSRRYSPRRSP
Trigger: GGGCGAGCGGCGGGGCGAGTACCTGCGGCTGAGCCGGGAAATCCAGGAAGCGGCGGCCACGCGCGGCCAGTGGGCGCTGGGCAGCGCCTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 90 bp GCCCGACCTGCACCAGGCACAGCTCGCCGGGCGAGGCCGAGGCGCTaGCCAGCGCCCACTGGCCGCGCGTGGCCGCCGCTTCCTGGATTT +
Preference number: 5 (lower is better)
Translates to: ARPAPGTARRARPRR*PAPTGRAWPPLPGF
Trigger: AAATCCAGGAAGCGGCGGCCACGCGCGGCCAGTGGGCGCTGGGCAGCGCCTCGGCCTCGCCCGGCGAGCTGTGCCTGGTGCAGGTCGGGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 90 bp CGCTCGCCCACCAGCCCCCACAGCTGCACCGGGATCACATCGGGATaGACGTCCACGAAGGACACCCGCAGGGCCAGCGAGGCCCCCGGC +
Preference number: 5 (lower is better)
Translates to: RSPTSPHSCTGITSG*TSTKDTRRASEAPG
Trigger: GCCGGGGGCCTCGCTGGCCCTGCGGGTGTCCTTCGTGGACGTGCATCCCGATGTGATCCCGGTGCAGCTGTGGGGGCTGGTGGGCGAGCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 90 bp AGCCGCAGGTACTCGCCCCGCCGCTCGCCCACCAGCCCCCACAGCTaGACCGGGATCACATCGGGATGCACGTCCACGAAGGACACCCGC +
Preference number: 5 (lower is better)
Translates to: SRRYSPRRSPTSPHS*TGITSGCTSTKDTR
Trigger: GCGGGTGTCCTTCGTGGACGTGCATCCCGATGTGATCCCGGTGCAGCTGTGGGGGCTGGTGGGCGAGCGGCGGGGCGAGTACCTGCGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 90 bp GGCCCTCGTCCAGCAGGAAGACACGGCTCTCCTGTGCCTGCCGGCTaGCCACGCGGCAGCGGTGCCACAAAAGCCCGACCTGCACCAGGC +
Preference number: 5 (lower is better)
Translates to: GPRPAGRHGSPVPAG*PRGSGATKARPAPG
Trigger: GCCTGGTGCAGGTCGGGCTTTTGTGGCACCGCTGCCGCGTGGTCAGCCGGCAGGCACAGGAGAGCCGTGTCTTCCTGCTGGACGAGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 90 bp AAGACACGGCTCTCCTGTGCCTGCCGGCTGACCACGCGGCAGCGGTaGCACAAAAGCCCGACCTGCACCAGGCACAGCTCGCCGGGCGAG +
Preference number: 5 (lower is better)
Translates to: KTRLSCACRLTTRQR*HKSPTCTRHSSPGE
Trigger: CTCGCCCGGCGAGCTGTGCCTGGTGCAGGTCGGGCTTTTGTGGCACCGCTGCCGCGTGGTCAGCCGGCAGGCACAGGAGAGCCGTGTCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 90 bp GCACCAGGCCCGCTAGCACGCAGCCCAGCACTTCCGAGGGCAAATTaGAGAACTCTCTGCGCCCAGGCGCCAGCGAGCCTGCTCCGGCCG +
Preference number: 5 (lower is better)
Translates to: APGPLARSPALPRAN*RTLCAQAPASLLRP
Trigger: CGGCCGGAGCAGGCTCGCTGGCGCCTGGGCGCAGAGAGTTCTTCAATTTGCCCTCGGAAGTGCTGGGCTGCGTGCTAGCGGGCCTGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 90 bp ATGGTGCGGCCCTCGTCCAGCAGGAAGACACGGCTCTCCTGTGCCTaGCGGCTGACCACGCGGCAGCGGTGCCACAAAAGCCCGACCTGC +
Preference number: 5 (lower is better)
Translates to: MVRPSSSRKTRLSCA*RLTTRQRCHKSPTC
Trigger: GCAGGTCGGGCTTTTGTGGCACCGCTGCCGCGTGGTCAGCCGGCAGGCACAGGAGAGCCGTGTCTTCCTGCTGGACGAGGGCCGCACCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 90 bp CGTGATGGTGCGGCCCTCGTCCAGCAGGAAGACACGGCTCTCCTGTaGCTGCCGGCTGACCACGCGGCAGCGGTGCCACAAAAGCCCGAC +
Preference number: 5 (lower is better)
Translates to: RDGAALVQQEDTALL*LPADHAAAVPQKPD
Trigger: GTCGGGCTTTTGTGGCACCGCTGCCGCGTGGTCAGCCGGCAGGCACAGGAGAGCCGTGTCTTCCTGCTGGACGAGGGCCGCACCATCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CCA 90 bp AGGCTGTCGGGCACCCGCCGAGCCAGGCCCAGCTCCCGCATCTGTTaGAACACATCAGGCACCTCCAGGAGGACCAGGCGATGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: RLSGTRRARPSSRIC*NTSGTSRRTRRWSS
Trigger: GCTGCTCCATCGCCTGGTCCTCCTGGAGGTGCCTGATGTGTTCCAACAGATGCGGGAGCTGGGCCTGGCTCGGCGGGTGCCCGACAGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 90 bp TGGAGCAGCAGCACGTCCAGGACGCACCCGTGCACCTCCTTGCCCTaGAGGTTGCTAAGGAAGTCCACGGCGTCGGCGGGCCAGTGCTGC +
Preference number: 5 (lower is better)
Translates to: WSSSTSRTHPCTSLP*RLLRKSTASAGQCC
Trigger: GCAGCACTGGCCCGCCGACGCCGTGGACTTCCTTAGCAACCTTCAGGGCAAGGAGGTGCACGGGTGCGTCCTGGACGTGCTGCTGCTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 90 bp CGAGGGCAAATTGAAGAACTCTCTGCGCCCAGGCGCCAGCGAGCCTaGTCCGGCCGTGATGGTGCGGCCCTCGTCCAGCAGGAAGACACG +
Preference number: 5 (lower is better)
Translates to: RGQIEELSAPRRQRA*SGRDGAALVQQEDT
Trigger: CGTGTCTTCCTGCTGGACGAGGGCCGCACCATCACGGCCGGAGCAGGCTCGCTGGCGCCTGGGCGCAGAGAGTTCTTCAATTTGCCCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 90 bp CCTGGGCCATGCTCTCGGAGAGGCGGTGGATCTCCTGCGAGACGCTaGGGAGCTGGCAGTGAATGCGGTGGGGATGGCACACTTGGGTTA +
Preference number: 5 (lower is better)
Translates to: PGPCSRRGGGSPARR*GAGSECGGDGTLGL
Trigger: TAACCCAAGTGTGCCATCCCCACCGCATTCACTGCCAGCTCCGCAGCGTCTCGCAGGAGATCCACCGCCTCTCCGAGAGCATGGCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CCA 90 bp CGCATCTGTTGGAACACATCAGGCACCTCCAGGAGGACCAGGCGATaGAGCAGCAGCACGTCCAGGACGCACCCGTGCACCTCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: RICWNTSGTSRRTRR*SSSTSRTHPCTSLP
Trigger: GGGCAAGGAGGTGCACGGGTGCGTCCTGGACGTGCTGCTGCTCCATCGCCTGGTCCTCCTGGAGGTGCCTGATGTGTTCCAACAGATGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 90 bp TGCGGAGCTGGCAGTGAATGCGGTGGGGATGGCACACTTGGGTTATaGCCACGGCCTCCGTCACGCCCAGCTGCAGCTGGGGATAGAAGT +
Preference number: 5 (lower is better)
Translates to: CGAGSECGGDGTLGL*PRPPSRPAAAGDRS
Trigger: ACTTCTATCCCCAGCTGCAGCTGGGCGTGACGGAGGCCGTGGTCATAACCCAAGTGTGCCATCCCCACCGCATTCACTGCCAGCTCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAGGCGTCGAGCACATCTaGACGGCGCGGCGCGGCCCC +
Preference number: 5 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPGVEHI*TARRGP
Trigger: GGGGCCGCGCCGCGCCGTCAAGATGTGCTCGACGCC...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 90 bp AAATTAAGGGCCGCGCCTCAGGGCCTCGAAATCCTCCGCGCCGCCTaGAGGCGAGTCCCAGCCAAACTAGGTTCAAAGGACCCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: KLRAAPQGLEILRAA*RRVPAKLGSKDPVE
Trigger: CTCCACTGGGTCCTTTGAACCTAGTTTGGCTGGGACTCGCCTTCAGGCGGCGCGGAGGATTTCGAGGCCCTGAGGCGCGGCCCTTAATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 90 bp CTCAAGCAACAGTGCTCTGTACCAATGTCCATCCAGGCCACAGGATaGACACGGAGAGCCCGGCTTATCTGGGCTCTCCTCCCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: LKQQCSVPMSIQATG*TRRARLIWALLPLL
Trigger: GAGGAGAGGGAGGAGAGCCCAGATAAGCCGGGCTCTCCGTGTGCATCCTGTGGCCTGGATGGACATTGGTACAGAGCACTGTTGCTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 90 bp AAGCACCTGGGCACAGCGCTGGGGCCGAAAAGTCTCAAGCAACAGTaGTCTGTACCAATGTCCATCCAGGCCACAGGATGCACACGGAGA +
Preference number: 5 (lower is better)
Translates to: KHLGTALGPKSLKQQ*SVPMSIQATGCTRR
Trigger: TCTCCGTGTGCATCCTGTGGCCTGGATGGACATTGGTACAGAGCACTGTTGCTTGAGACTTTTCGGCCCCAGCGCTGTGCCCAGGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGCAGACCAGGCTGCTTTaGCTTGAGCGGGACTCGCGA +
Preference number: 5 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQQTRLL*LERDSR
Trigger: TCGCGAGTCCCGCTCAAGCAAAAGCAGCCTGGTCTG...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 90 bp AGCAGGAGACTGAGACTGAGATGTTTCTGGTTCCTCCTCCTCTGTTaGCTGGCTCTGAAGGACTCGGTCAGCCAAGCAACACGACTGTAC +
Preference number: 5 (lower is better)
Translates to: SRRLRLRCFWFLLLC*LALKDSVSQATRLY
Trigger: GTACAGTCGTGTTGCTTGGCTGACCGAGTCCTTCAGAGCCAGGCAACAGAGGAGGAGGAACCAGAAACATCTCAGTCTCAGTCTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CCA 90 bp AGCTGCAGTGTAAATAGCTCCATGGCGCCTTTTGTGACACACTCTTaGGAGAGTGGCACATTCGGTGGCACCGGGCTTAGCTCCCCTTTT +
Preference number: 5 (lower is better)
Translates to: SCSVNSSMAPFVTHS*ESGTFGGTGLSSPF
Trigger: AAAAGGGGAGCTAAGCCCGGTGCCACCGAATGTGCCACTCTCCCAAGAGTGTGTCACAAAAGGCGCCATGGAGCTATTTACACTGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGCTCCCGCATCTGTaGGAACACATCAGGCACCTC +
Preference number: 5 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPQLPHL*EHIRHL
Trigger: GAGGTGCCTGATGTGTTCCAACAGATGCGGGAGCTG...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGTGGCCCAGAGTGCTTTaGGGTCCACACAGTCTTCAA +
Preference number: 5 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQWPRVL*GPHSLQ
Trigger: TTGAAGACTGTGTGGACCCAAAAGCACTCTGGGCCA...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGGCAACATGGAAAGGCTaGCATGGGAACCGACAGAAG +
Preference number: 5 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQATWKG*HGNRQK
Trigger: CTTCTGTCGGTTCCCATGCAAGCCTTTCCATGTTGC...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATGGCGTCGAGCACATCTaGACGGCGCGGCGCGGCCCC +
Preference number: 5 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYGVEHI*TARRGP
Trigger: GGGGCCGCGCCGCGCCGTCAAGATGTGCTCGACGCC...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAACTTCCGAGGGCAAATaGAAGAACTCTCTGCGCCCA +
Preference number: 5 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPTSEGK*KNSLRP
Trigger: TGGGCGCAGAGAGTTCTTCAATTTGCCCTCGGAAGT...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGTTTTGTGACACACTCTaGGGAGAGTGGCACATTCGG +
Preference number: 5 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQFCDTL*GEWHIR
Trigger: CCGAATGTGCCACTCTCCCAAGAGTGTGTCACAAAA...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGATCTTTCCCTACTCTTaGGGATACAGCCTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQIFPYS*GYSLRW
Trigger: CCACCTGAGGCTGTATCCCAAAGAGTAGGGAAAGAT...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450697.1
CDS-3UTR CAA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCCCAGGCTGCTTTTGCTaGAGCGGGACTCGCGAGAGA +
Preference number: 5 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSPGCFC*SGTRER
Trigger: TCTCTCGCGAGTCCCGCTCAAGCAAAAGCAGCCTGG...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGACAGAGAGAAGGTCATaGGGTTGTTGCTCCTTGATC +
Preference number: 5 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQTERRS*GCCSLI
Trigger: GATCAAGGAGCAACAACCCAATGACCTTCTCTCTGT...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 90 bp CCACCGGCATTCGAAAATATTCAGGCAGCAAGTACCGAAGGCTGCTaGAACTCACTAACTCCTTCCTTCCATAGTCCACATGAAGCACCT +
Preference number: 5 (lower is better)
Translates to: PPAFENIQAASTEGC*NSLTPSFHSPHEAP
Trigger: AGGTGCTTCATGTGGACTATGGAAGGAAGGAGTTAGTGAGTTGCAGCAGCCTTCGGTACTTGCTGCCTGAATATTTTCGAATGCCGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CCA 90 bp CATGGGAACCGACAGAAGTTCAGAAGGAATGGCCCAGAGTGCTTTTaGGTCCACACAGTCTTCAATGTTTCCAAAGTCCACAAGCCTGAC +
Preference number: 5 (lower is better)
Translates to: HGNRQKFRRNGPECF*VHTVFNVSKVHKPD
Trigger: GTCAGGCTTGTGGACTTTGGAAACATTGAAGACTGTGTGGACCCAAAAGCACTCTGGGCCATTCCTTCTGAACTTCTGTCGGTTCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCATTGGGTTGTTGCTCCTaGATCACAGCACGATACCAT +
Preference number: 5 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPLGCCS*ITARYH
Trigger: ATGGTATCGTGCTGTGATCAAGGAGCAACAACCCAA...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAAATTCACATCTTATaGCAGCCTCGCTGGTCCGTT +
Preference number: 5 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPQIHIL*QPRWSV
Trigger: AACGGACCAGCGAGGCTGCAATAAGATGTGAATTTG...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGGGACTCTTATCCAATTaGGGTATGCCATTCCAGACA +
Preference number: 5 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQGLLSN*GMPFQT
Trigger: TGTCTGGAATGGCATACCCAAATTGGATAAGAGTCC...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000450697.1
CDS-3UTR CAA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGTTTTACAGTCTTTTGTaGGTGGCGCATGCTGATGCT +
Preference number: 5 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQFYSLL*VAHADA
Trigger: AGCATCAGCATGCGCCACCAACAAAAGACTGTAAAA...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 90 bp TCAGCCAGGGTGCACTTCACAGCCAATATTGGTAGCTGCCTAAACTaGGGAAGCAGCATCCTTACGTCATACCAGTCCACATTTTCCGAA +
Preference number: 5 (lower is better)
Translates to: SARVHFTANIGSCLN*GSSILTSYQSTFSE
Trigger: TTCGGAAAATGTGGACTGGTATGACGTAAGGATGCTGCTTCCTCAGTTTAGGCAGCTACCAATATTGGCTGTGAAGTGCACCCTGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 90 bp TCACCACCGGCATTCGAAAATATTCAGGCAGCAAGTACCGAAGGCTaGTGCAACTCACTAACTCCTTCCTTCCATAGTCCACATGAAGCA +
Preference number: 5 (lower is better)
Translates to: SPPAFENIQAASTEG*CNSLTPSFHSPHEA
Trigger: TGCTTCATGTGGACTATGGAAGGAAGGAGTTAGTGAGTTGCAGCAGCCTTCGGTACTTGCTGCCTGAATATTTTCGAATGCCGGTGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 90 bp AGTTCTAGTTCTGGCTGTTTCTCAGCTTCACAGCTGAGAGGAAGCTaGAGTGTAAATAGCTCCATGGCGCCTTTTGTGACACACTCTTGG +
Preference number: 5 (lower is better)
Translates to: SSSSGCFSASQLRGS*SVNSSMAPFVTHSW
Trigger: CCAAGAGTGTGTCACAAAAGGCGCCATGGAGCTATTTACACTGCAGCTTCCTCTCAGCTGTGAAGCTGAGAAACAGCCAGAACTAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCATTTGCATTCACTGCCTaGCCTAGTATCAGTGTCTTC +
Preference number: 5 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPFAFTA*PSISVF
Trigger: GAAGACACTGATACTAGGCAAGGCAGTGAATGCAAA...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGTCCACATTTTCCGAATaGCCTCGGTCAACTAAGAAT +
Preference number: 5 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQSTFSE*PRSTKN
Trigger: ATTCTTAGTTGACCGAGGCAATTCGGAAAATGTGGA...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCATTTCCATCAGTATACTaGGCAAGGCACAAGGTTCCA +
Preference number: 5 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPFPSVY*ARHKVP
Trigger: TGGAACCTTGTGCCTTGCCAAGTATACTGATGGAAA...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGTCTGGTAAACCATTATaGTGCTTGCTTCCATCACTG +
Preference number: 5 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQSGKPL*CLLPSL
Trigger: CAGTGATGGAAGCAAGCACAATAATGGTTTACCAGA...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316081.11
ENST00000450697.1
ENST00000544460.5
CDS-3UTR CAA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAGGACTCTTATCCAATTaGGGTATGCCATTCCAGACA +
Preference number: 5 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPGLLSN*GMPFQT
Trigger: TGTCTGGAATGGCATACCCAAATTGGATAAGAGTCC...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000450697.1
CDS-3UTR CAA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGAACAAGCAAAAGCCATaGTTTCAGCACAGGATTGGT +
Preference number: 5 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQNKQKP*FQHRIG
Trigger: ACCAATCCTGTGCTGAAACAATGGCTTTTGCTTGTT...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACCAAACCCCTTTTCCTaGTTCCTTCTTCAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPPNPFS*FLLQLF
Trigger: AAACAGCTGAAGAAGGAACAAGGAAAAGGGGTTTGG...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544460.5
CDS CCA 90 bp AACATGGAAAGGCTTGCATGGGAACCGACAGAAGTTCAGAAGGAATaGCCCAGAGTGCTTTTGGGTCCACACAGTCTTCAATGTTTCCAA +
Preference number: 5 (lower is better)
Translates to: NMERLAWEPTEVQKE*PRVLLGPHSLQCFQ
Trigger: TTGGAAACATTGAAGACTGTGTGGACCCAAAAGCACTCTGGGCCATTCCTTCTGAACTTCTGTCGGTTCCCATGCAAGCCTTTCCATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CCA 90 bp CCATCACCTCCAAACCCCTTTTCTCAGGTGGACTCTTATCCAATTTaGGTATGCCATTCCAGACATTCTCAGGGTTCACTATCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: PSPPNPFSQVDSYPI*VCHSRHSQGSLSPP
Trigger: TGGAGGAGATAGTGAACCCTGAGAATGTCTGGAATGGCATACCCAAATTGGATAAGAGTCCACCTGAGAAAAGGGGTTTGGAGGTGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316081.11
CDS CCA 90 bp TCCCTACTCTTTGGGATACAGCCTCAGGTGGACTCTTATCCAATTTaGGTATGCCATTCCAGACATTCTCAGGGTTCACTATCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: SLLFGIQPQVDSYPI*VCHSRHSQGSLSPP
Trigger: TGGAGGAGATAGTGAACCCTGAGAATGTCTGGAATGGCATACCCAAATTGGATAAGAGTCCACCTGAGGCTGTATCCCAAAGAGTAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450697.1
CDS-3UTR CAA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTGTGGGGATGGCACACTaGGGTTATGACCACGGCCTC +
Preference number: 5 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTVGMAH*GYDHGL
Trigger: GAGGCCGTGGTCATAACCCAAGTGTGCCATCCCCAC...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCATCCACATTTTCCGAATaGCCTCGGTCAACTAAGAAT +
Preference number: 5 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPSTFSE*PRSTKN
Trigger: ATTCTTAGTTGACCGAGGCAATTCGGAAAATGTGGA...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGTTTCTTCCCCTGTTCTaGATTCGTCAAGAATCTCAA +
Preference number: 5 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQFLPLF*IRQESQ
Trigger: TTGAGATTCTTGACGAATCAAGAACAGGGGAAGAAA...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGGCACAACTAGTTCAGTaGAACCATTTGTTACAACTG +
Preference number: 5 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQAQLVQ*NHLLQL
Trigger: CAGTTGTAACAAATGGTTCAACTGAACTAGTTGTGC...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGTTCCATCTGGATCTTTaGCTACAACTAAAGCCTTCA +
Preference number: 5 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQFHLDL*LQLKPS
Trigger: TGAAGGCTTTAGTTGTAGCAAAAGATCCAGATGGAA...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGTATCATATCTCCTCTTaGCAAAGGTGGACCTACATA +
Preference number: 5 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQYHISS*QRWTYI
Trigger: TATGTAGGTCCACCTTTGCAAAGAGGAGATATGATA...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGAAACCATTATTGTGCTaGCTTCCATCACTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQKPLLC*LPSLLS
Trigger: AGAAAGCAGTGATGGAAGCAAGCACAATAATGGTTT...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316081.11
ENST00000450697.1
ENST00000544460.5
CDS-3UTR CAA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCATCTGGTAAACCATTATaGTGCTTGCTTCCATCACTG +
Preference number: 5 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPSGKPL*CLLPSL
Trigger: CAGTGATGGAAGCAAGCACAATAATGGTTTACCAGA...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316081.11
ENST00000450697.1
ENST00000544460.5
CDS-3UTR CAA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGAAAGGTTCAAAACCCTaGTTCCTTCTTCAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQKGSKP*FLLQLF
Trigger: AAACAGCTGAAGAAGGAACAAGGGTTTTGAACCTTT...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000450697.1
CDS GCA 90 bp CCTCCAAACCCCTTTTCTCAGGTGGACTCTTATCCAATTTGGGTATaGCATTCCAGACATTCTCAGGGTTCACTATCTCCTCCATACCAT +
Preference number: 5 (lower is better)
Translates to: PPNPFSQVDSYPIWV*HSRHSQGSLSPPYH
Trigger: ATGGTATGGAGGAGATAGTGAACCCTGAGAATGTCTGGAATGGCATACCCAAATTGGATAAGAGTCCACCTGAGAAAAGGGGTTTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316081.11
CDS GCA 90 bp CTCTTTGGGATACAGCCTCAGGTGGACTCTTATCCAATTTGGGTATaGCATTCCAGACATTCTCAGGGTTCACTATCTCCTCCATACCAT +
Preference number: 5 (lower is better)
Translates to: LFGIQPQVDSYPIWV*HSRHSQGSLSPPYH
Trigger: ATGGTATGGAGGAGATAGTGAACCCTGAGAATGTCTGGAATGGCATACCCAAATTGGATAAGAGTCCACCTGAGGCTGTATCCCAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450697.1
CDS-3UTR CAA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGCATTTGTTACAACTGTaGTGTCACTCAAAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQHLLQL*CHSKLL
Trigger: CAAAAGCTTTGAGTGACACAACAGTTGTAACAAATG...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCATCTACAAATGTTACATaGACATGCTCCACAGACTGT +
Preference number: 5 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPSTNVT*TCSTDC
Trigger: ACAGTCTGTGGAGCATGTCAATGTAACATTTGTAGA...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAGAAGTTTTACTGGTCTaGCAAGTCTCTTTTCTACCA +
Preference number: 5 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPEVLLV*QVSFLP
Trigger: TGGTAGAAAAGAGACTTGCAAGACCAGTAAAACTTC...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGGTGTCAATGTCTGATTaGTTAACAGACTTTGAACTG +
Preference number: 5 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQVSMSD*LTDFEL
Trigger: CAGTTCAAAGTCTGTTAACAAATCAGACATTGACAC...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGCGGAAGTTACTTGGTTaGGTTCCAATAATGTTTACA +
Preference number: 5 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQRKLLG*VPIMFT
Trigger: TGTAAACATTATTGGAACCAAACCAAGTAACTTCCG...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAAAGATTCTACACAACTaGACTTTCTCATGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPKILHN*TFSCPQ
Trigger: CTGAGGACATGAGAAAGTCAAGTTGTGTAGAATCTT...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAAAACCATTATTGTGCTaGCTTCCATCACTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPKPLLC*LPSLLS
Trigger: AGAAAGCAGTGATGGAAGCAAGCACAATAATGGTTT...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316081.11
ENST00000450697.1
ENST00000544460.5
CDS-3UTR CAA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAAAAGGTTCAAAACCCTaGTTCCTTCTTCAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPKGSKP*FLLQLF
Trigger: AAACAGCTGAAGAAGGAACAAGGGTTTTGAACCTTT...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000450697.1
CDS-3UTR CAA 90 bp GGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACAGAAACTCAGCTTGAAATaGAAGGCTTCCTATAATCTG +
Preference number: 5 (lower is better)
Translates to: GLRKMPLVQGQLLTDWPQKLSLK*KASYNL
Trigger: CAGATTATAGGAAGCCTTCAATTTCAAGCTGAGTTT...CTGTGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAGGAGTTAAACTCAGCTaGAAATTGAAGGCTTCCTAT +
Preference number: 5 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPGVKLS*KLKASY
Trigger: ATAGGAAGCCTTCAATTTCAAGCTGAGTTTAACTCC...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CCA 90 bp CTAACTCCTAAAGACAAAGGATCCATCTTGTCATCTAAAGGCAGCTaGGCTGTAGGTAGTTCTAGTTCTGGCTGTTTCTCAGCTTCACAG +
Preference number: 5 (lower is better)
Translates to: LTPKDKGSILSSKGS*AVGSSSSGCFSASQ
Trigger: CTGTGAAGCTGAGAAACAGCCAGAACTAGAACTACCTACAGCCCAGCTGCCTTTAGATGACAAGATGGATCCTTTGTCTTTAGGAGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATCAGACCAGGCTGCTTTaGCTTGAGCGGGACTCGCGA +
Preference number: 5 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYQTRLL*LERDSR
Trigger: TCGCGAGTCCCGCTCAAGCAAAAGCAGCCTGGTCTG...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATGTGGGGATGGCACACTaGGGTTATGACCACGGCCTC +
Preference number: 5 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYVGMAH*GYDHGL
Trigger: GAGGCCGTGGTCATAACCCAAGTGTGCCATCCCCAC...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCATGGATGACTAATTCTTaGTGGAGCACAGTCTTTTTA +
Preference number: 5 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPWMTNS*WSTVFL
Trigger: TAAAAAGACTGTGCTCCACAAAGAATTAGTCATCCA...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACATTTGTTACAACTGTaGTGTCACTCAAAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPHLLQL*CHSKLL
Trigger: CAAAAGCTTTGAGTGACACAACAGTTGTAACAAATG...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTGGGTTGTTGCTCCTaGATCACAGCACGATACCAT +
Preference number: 5 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSLGCCS*ITARYH
Trigger: ATGGTATCGTGCTGTGATCAAGGAGCAACAACCCAA...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCCAAATTCACATCTTATaGCAGCCTCGCTGGTCCGTT +
Preference number: 5 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSQIHIL*QPRWSV
Trigger: AACGGACCAGCGAGGCTGCAATAAGATGTGAATTTG...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCACGGAAGTTACTTGGTTaGGTTCCAATAATGTTTACA +
Preference number: 5 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPRKLLG*VPIMFT
Trigger: TGTAAACATTATTGGAACCAAACCAAGTAACTTCCG...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp GTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTGACTGATTGGCCAATGAGTAAGCCAAACTaGTCTATTCATTATTCCAGG +
Preference number: 5 (lower is better)
Translates to: VGLRKMPLVQGQLLTDWPMSKPN*SIHYSR
Trigger: CCTGGAATAATGAATAGACAAGTTTGGCTTACTCAT...TGGCCAATCAGTCAGAAGCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 90 bp GAGGAAGCAGCATCCTTACGTCATACCAGTCCACATTTTCCGAATTaGCTCGGTCAACTAAGAATACATCCACACTCTTGTCATCCAATT +
Preference number: 5 (lower is better)
Translates to: EEAASLRHTSPHFPN*LGQLRIHPHSCHPI
Trigger: AATTGGATGACAAGAGTGTGGATGTATTCTTAGTTGACCGAGGCAATTCGGAAAATGTGGACTGGTATGACGTAAGGATGCTGCTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTACTTCCGAGGGCAAATaGAAGAACTCTCTGCGCCCA +
Preference number: 5 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTTSEGK*KNSLRP
Trigger: TGGGCGCAGAGAGTTCTTCAATTTGCCCTCGGAAGT...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTTGGCCCAGAGTGCTTTaGGGTCCACACAGTCTTCAA +
Preference number: 5 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTWPRVL*GPHSLQ
Trigger: TTGAAGACTGTGTGGACCCAAAAGCACTCTGGGCCA...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTGCAACATGGAAAGGCTaGCATGGGAACCGACAGAAG +
Preference number: 5 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTATWKG*HGNRQK
Trigger: CTTCTGTCGGTTCCCATGCAAGCCTTTCCATGTTGC...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTCATCAAACTCTGCTTaGTCAACCAGATGGCACTCT +
Preference number: 5 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSSSNSA*STRWHS
Trigger: AGAGTGCCATCTGGTTGACAAAGCAGAGTTTGATGA...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTCTCAAATACTCTGTaGGTCTGCGTAAGATGCCAC +
Preference number: 5 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSFSNTL*VCVRCH
Trigger: GTGGCATCTTACGCAGACCAACAGAGTATTTGAGAA...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 90 bp AAATGTTACATTGACATGCTCCACAGACTGTATCCCACTAATAAGTaGTCTGGACCACTGTCTGTTTACTGTTCGCTTAGCCAAACAAGC +
Preference number: 5 (lower is better)
Translates to: KCYIDMLHRLYPTNK*SGPLSVYCSLSQTS
Trigger: GCTTGTTTGGCTAAGCGAACAGTAAACAGACAGTGGTCCAGAGCACTTATTAGTGGGATACAGTCTGTGGAGCATGTCAATGTAACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 90 bp CTCAAATCCCTGCAAGGAGCAATGAATGCACAACCCCGGCAATATTaGATTAACAAGGTCAAGCCTACCTATTTTGTTAGTATGAACCAC +
Preference number: 5 (lower is better)
Translates to: LKSLQGAMNAQPRQY*INKVKPTYFVSMNH
Trigger: GTGGTTCATACTAACAAAATAGGTAGGCTTGACCTTGTTAATGCAATATTGCCGGGGTTGTGCATTCATTGCTCCTTGCAGGGATTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTGAGAAGGTCATTGGGTaGTTGCTCCTTGATCACAGC +
Preference number: 5 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTEKVIG*LLLDHS
Trigger: GCTGTGATCAAGGAGCAACAACCCAATGACCTTCTC...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTTTTTGTGACACACTCTaGGGAGAGTGGCACATTCGG +
Preference number: 5 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTFCDTL*GEWHIR
Trigger: CCGAATGTGCCACTCTCCCAAGAGTGTGTCACAAAA...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTGTTTCAGCACAGGATaGGTGGTACTACACAATTTC +
Preference number: 5 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSCFSTG*VVLHNF
Trigger: GAAATTGTGTAGTACCACCAATCCTGTGCTGAAACA...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 90 bp CTTGACTTTCTCATGTCCTCAGTACACATGGATTCCTGTGCTTTCTaGCTAACTCCTAAAGACAAAGGATCCATCTTGTCATCTAAAGGC +
Preference number: 5 (lower is better)
Translates to: LDFLMSSVHMDSCAF*LTPKDKGSILSSKG
Trigger: GCCTTTAGATGACAAGATGGATCCTTTGTCTTTAGGAGTTAGTCAGAAAGCACAGGAATCCATGTGTACTGAGGACATGAGAAAGTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 90 bp CTGAGATATGATCTGGTAAACCATTATTGTGCTTGCTTCCATCACTaGTTTCTTCCTCAGAGAACAAAGGCATCAATGCCGAAATGGCAT +
Preference number: 5 (lower is better)
Translates to: LRYDLVNHYCACFHH*FLPQRTKASMPKWH
Trigger: ATGCCATTTCGGCATTGATGCCTTTGTTCTCTGAGGAAGAAAGCAGTGATGGAAGCAAGCACAATAATGGTTTACCAGATCATATCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316081.11
ENST00000450697.1
ENST00000544460.5
CDS CCA 90 bp TTAGGATCACAATCTGCTCCATGTAGATGCAATGACATCCTGCGCTaGTCATCAAAAGATTCTACACAACTTGACTTTCTCATGTCCTCA +
Preference number: 5 (lower is better)
Translates to: LGSQSAPCRCNDILR*SSKDSTQLDFLMSS
Trigger: TGAGGACATGAGAAAGTCAAGTTGTGTAGAATCTTTTGATGACCAGCGCAGGATGTCATTGCATCTACATGGAGCAGATTGTGATCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTACTGAAGGTGACATaGTGTTTCCTCAACCTAATC +
Preference number: 5 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSLLKVT*CFLNLI
Trigger: GATTAGGTTGAGGAAACACAATGTCACCTTCAGTAA...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCAATACATCCACACTCTaGTCATCCAATTTGGTGACT +
Preference number: 5 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSNTSTL*SSNLVT
Trigger: AGTCACCAAATTGGATGACAAGAGTGTGGATGTATT...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTTCTTCCCCTGTTCTaGATTCGTCAAGAATCTCAA +
Preference number: 5 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSFLPLF*IRQESQ
Trigger: TTGAGATTCTTGACGAATCAAGAACAGGGGAAGAAA...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCGTTCAGTTGAACCATTaGTTACAACTGTTGTGTCAC +
Preference number: 5 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSVQLNH*LQLLCH
Trigger: GTGACACAACAGTTGTAACAAATGGTTCAACTGAAC...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCGCACAACTAGTTCAGTaGAACCATTTGTTACAACTG +
Preference number: 5 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSAQLVQ*NHLLQL
Trigger: CAGTTGTAACAAATGGTTCAACTGAACTAGTTGTGC...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTATCATATCTCCTCTTaGCAAAGGTGGACCTACATA +
Preference number: 5 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSYHISS*QRWTYI
Trigger: TATGTAGGTCCACCTTTGCAAAGAGGAGATATGATA...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCGGAGTTAAACTCAGCTaGAAATTGAAGGCTTCCTAT +
Preference number: 5 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSGVKLS*KLKASY
Trigger: ATAGGAAGCCTTCAATTTCAAGCTGAGTTTAACTCC...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 90 bp TTAGAATTTTTATTGTCAGGAACCTCAAATCCCTGCAAGGAGCAATaGATGCACAACCCCGGCAATATTGCATTAACAAGGTCAAGCCTA +
Preference number: 5 (lower is better)
Translates to: LEFLLSGTSNPCKEQ*MHNPGNIALTRSSL
Trigger: TAGGCTTGACCTTGTTAATGCAATATTGCCGGGGTTGTGCATTCATTGCTCCTTGCAGGGATTTGAGGTTCCTGACAATAAAAATTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTGGATGACTAATTCTTaGTGGAGCACAGTCTTTTTA +
Preference number: 5 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSWMTNS*WSTVFL
Trigger: TAAAAAGACTGTGCTCCACAAAGAATTAGTCATCCA...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTTTTCCATCAGTATACTaGGCAAGGCACAAGGTTCCA +
Preference number: 5 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTFPSVY*ARHKVP
Trigger: TGGAACCTTGTGCCTTGCCAAGTATACTGATGGAAA...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATGAGAAGGTCATTGGGTaGTTGCTCCTTGATCACAGC +
Preference number: 5 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYEKVIG*LLLDHS
Trigger: GCTGTGATCAAGGAGCAACAACCCAATGACCTTCTC...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp ATTTTCTCAAATACTCTGTTGGTCTGCGTAAGATGCCACTTGTTCAAGGGCAGCTTTAAGGCATTCTACTaGCTAAAGAAAGGTTCCACA +
Preference number: 5 (lower is better)
Translates to: IFSNTLLVCVRCHLFKGSFKAFY*LKKGST
Trigger: TGTGGAACCTTTCTTTAGCAAGTAGAATGCCTTAAA...GCTGCCCTTGAACAAGTGGCATCTTACGCAGACCAACAGAGTATTTGAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 90 bp ACTGGTCTTGCAAGTCTCTTTTCTACCAAGAAATGGCATGCACTCTaGAAGGGGGTTAGCAAATCCACAATGTTAAACAGTTCTTCATTA +
Preference number: 5 (lower is better)
Translates to: TGLASLFSTKKWHAL*KGVSKSTMLNSSSL
Trigger: TAATGAAGAACTGTTTAACATTGTGGATTTGCTAACCCCCTTTCAGAGTGCATGCCATTTCTTGGTAGAAAAGAGACTTGCAAGACCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CCA 90 bp TTCTACTGTACTTCCAACTTCCAGCTCTCCTTTACTAGAGGAGCCTaGCTTAATTTCCAAGCAATTCTGCATAAGAGGAAAATAAACAGA +
Preference number: 5 (lower is better)
Translates to: FYCTSNFQLSFTRGA*LNFQAILHKRKINR
Trigger: TCTGTTTATTTTCCTCTTATGCAGAATTGCTTGGAAATTAAGCCAGGCTCCTCTAGTAAAGGAGAGCTGGAAGTTGGAAGTACAGTAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATACAGAGAGAAGGTCATaGGGTTGTTGCTCCTTGATC +
Preference number: 5 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYTERRS*GCCSLI
Trigger: GATCAAGGAGCAACAACCCAATGACCTTCTCTCTGT...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTAACAAGCAAAAGCCATaGTTTCAGCACAGGATTGGT +
Preference number: 5 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTNKQKP*FQHRIG
Trigger: ACCAATCCTGTGCTGAAACAATGGCTTTTGCTTGTT...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATTGGCAGCTCTTCTCTTaGACTTTTGGTCACGGTAAG +
Preference number: 5 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYWQLFS*TFGHGK
Trigger: CTTACCGTGACCAAAAGTCAAAGAGAAGAGCTGCCA...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 90 bp TTCATTTCATTCTGTGTTTTAGGATCACAATCTGCTCCATGTAGATaGAATGACATCCTGCGCTGGTCATCAAAAGATTCTACACAACTT +
Preference number: 5 (lower is better)
Translates to: FISFCVLGSQSAPCR*NDILRWSSKDSTQL
Trigger: AAGTTGTGTAGAATCTTTTGATGACCAGCGCAGGATGTCATTGCATCTACATGGAGCAGATTGTGATCCTAAAACACAGAATGAAATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATTTTGCATTCACTGCCTaGCCTAGTATCAGTGTCTTC +
Preference number: 5 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYFAFTA*PSISVF
Trigger: GAAGACACTGATACTAGGCAAGGCAGTGAATGCAAA...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTTTACTGAAGGTGACATaGTGTTTCCTCAACCTAATC +
Preference number: 5 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTLLKVT*CFLNLI
Trigger: GATTAGGTTGAGGAAACACAATGTCACCTTCAGTAA...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTAATACATCCACACTCTaGTCATCCAATTTGGTGACT +
Preference number: 5 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTNTSTL*SSNLVT
Trigger: AGTCACCAAATTGGATGACAAGAGTGTGGATGTATT...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTTTCCATCTGGATCTTTaGCTACAACTAAAGCCTTCA +
Preference number: 5 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTFHLDL*LQLKPS
Trigger: TGAAGGCTTTAGTTGTAGCAAAAGATCCAGATGGAA...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATTCATCAAACTCTGCTTaGTCAACCAGATGGCACTCT +
Preference number: 5 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYSSNSA*STRWHS
Trigger: AGAGTGCCATCTGGTTGACAAAGCAGAGTTTGATGA...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CCA 90 bp CCTGTAATCAGGTATTTATCATCAAACTCTGCTTTGTCAACCAGATaGCACTCTAATTCACCTTCCAGTTCCTCAGTATCAATTTTATCT +
Preference number: 5 (lower is better)
Translates to: PVIRYLSSNSALSTR*HSNSPSSSSVSILS
Trigger: AGATAAAATTGATACTGAGGAACTGGAAGGTGAATTAGAGTGCCATCTGGTTGACAAAGCAGAGTTTGATGATAAATACCTGATTACAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTTTGGCAAAAGGTATTTaGTTACTCTCCGTAGTAAAG +
Preference number: 5 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTLAKGI*LLSVVK
Trigger: CTTTACTACGGAGAGTAACAAAATACCTTTTGCCAA...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp AAGCCATTGTTTCAGCACAGGATTGGTGGTACTACACAATTTCAAATGATGACTGTGTCAATGTCTGATTaGTTAACAGACTTTGAACTG +
Preference number: 5 (lower is better)
Translates to: KPLFQHRIGGTTQFQMMTVSMSD*LTDFEL
Trigger: CAGTTCAAAGTCTGTTAACAAATCAGACATTGACAC...AGTCATCATTTGAAATTGTGTAGTACCACCAATCCTGTGCTGAAACAATGGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATTGTTTCAGCACAGGATaGGTGGTACTACACAATTTC +
Preference number: 5 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYCFSTG*VVLHNF
Trigger: GAAATTGTGTAGTACCACCAATCCTGTGCTGAAACA...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 90 bp TCCAGCTTGGGCAATTACCTTACTAATGTTTTCTTCCCCTGTTCTTaGTTCGTCAAGAATCTCAATAACATATTGATGATCCTGTTTATC +
Preference number: 5 (lower is better)
Translates to: SSLGNYLTNVFFPCS*FVKNLNNILMILFI
Trigger: GATAAACAGGATCATCAATATGTTATTGAGATTCTTGACGAATCAAGAACAGGGGAAGAAAACATTAGTAAGGTAATTGCCCAAGCTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 90 bp GACTTTGAACTGGCACTTTTAATTACTTGGGTAGAAAGTTCTACTTaGGATTTTTCACTGAGAGCATACCTGCTAATCATATCATCTGCT +
Preference number: 5 (lower is better)
Translates to: DFELALLITWVESST*DFSLRAYLLIISSA
Trigger: AGCAGATGATATGATTAGCAGGTATGCTCTCAGTGAAAAATCTCAAGTAGAACTTTCTACCCAAGTAATTAAAAGTGCCAGTTCAAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATGTTCAGTTGAACCATTaGTTACAACTGTTGTGTCAC +
Preference number: 5 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYVQLNH*LQLLCH
Trigger: GTGACACAACAGTTGTAACAAATGGTTCAACTGAAC...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATTCTACAAATGTTACATaGACATGCTCCACAGACTGT +
Preference number: 5 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYSTNVT*TCSTDC
Trigger: ACAGTCTGTGGAGCATGTCAATGTAACATTTGTAGA...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATGAAGTTTTACTGGTCTaGCAAGTCTCTTTTCTACCA +
Preference number: 5 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYEVLLV*QVSFLP
Trigger: TGGTAGAAAAGAGACTTGCAAGACCAGTAAAACTTC...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATAAGATTCTACACAACTaGACTTTCTCATGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYKILHN*TFSCPQ
Trigger: CTGAGGACATGAGAAAGTCAAGTTGTGTAGAATCTT...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATAAACCATTATTGTGCTaGCTTCCATCACTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYKPLLC*LPSLLS
Trigger: AGAAAGCAGTGATGGAAGCAAGCACAATAATGGTTT...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATTTGGCAAAAGGTATTTaGTTACTCTCCGTAGTAAAG +
Preference number: 5 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYLAKGI*LLSVVK
Trigger: CTTTACTACGGAGAGTAACAAAATACCTTTTGCCAA...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATGGCACTTTTAATTACTaGGGTAGAAAGTTCTACTTG +
Preference number: 5 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYGTFNY*GRKFYL
Trigger: CAAGTAGAACTTTCTACCCAAGTAATTAAAAGTGCC...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS-3UTR CAA 90 bp CTACCTCAATTACTTTTAATGCAAACCTCTCTCCCTTCTACTTACGGAAATTATATGAGTAAGCCAAACTaGTCTATTCATTATTCCAGG +
Preference number: 5 (lower is better)
Translates to: LPQLLLMQTSLPSTYGNYMSKPN*SIHYSR
Trigger: CCTGGAATAATGAATAGACAAGTTTGGCTTACTCAT...ATAATTTCCGTAAGTAGAAGGGAGAGAGGTTTGCATTAAAAGTAATTGAGGTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 72 bp TTGCTAAGGAAGTCCACGGCGTCGGCGGGCCAGTGCTaGGGCGGCTCGCCTGAGCCCGCGCCGCAGCCTGCC +
Preference number: 6 (lower is better)
Translates to: LLRKSTASAGQC*GGSPEPAPQPA
Trigger: GGCAGGCTGCGGCGCGGGCTCAGGCGAGCCGCCGCAGCACTGGCCCGCCGACGCCGTGGACTTCCTTAGCAA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CAA 90 bp GCCAGCGAGGCCCCCGGCGCCGGCATTCCGGGCGTCGAGCACATCTaGACGGCGCGGCGCGGCCCCCACTTCCGGAAATTAAGGGCCGCG +
Preference number: 6 (lower is better)
Translates to: ASEAPGAGIPGVEHI*TARRGPHFRKLRAA
Trigger: CGCGGCCCTTAATTTCCGGAAGTGGGGGCCGCGCCGCGCCGTCAAGATGTGCTCGACGCCCGGAATGCCGGCGCCGGGGGCCTCGCTGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 72 bp CTCTGCGCCCAGGCGCCAGCGAGCCTGCTCCGGCCGTaGTGGTGCGGCCCTCGTCCAGCAGGAAGACACGGC +
Preference number: 6 (lower is better)
Translates to: LCAQAPASLLRP*WCGPRPAGRHG
Trigger: GCCGTGTCTTCCTGCTGGACGAGGGCCGCACCATCACGGCCGGAGCAGGCTCGCTGGCGCCTGGGCGCAGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 72 bp AGGTTGCTAAGGAAGTCCACGGCGTCGGCGGGCCAGTaGTGCGGCGGCTCGCCTGAGCCCGCGCCGCAGCCT +
Preference number: 6 (lower is better)
Translates to: RLLRKSTASAGQ*CGGSPEPAPQP
Trigger: AGGCTGCGGCGCGGGCTCAGGCGAGCCGCCGCAGCACTGGCCCGCCGACGCCGTGGACTTCCTTAGCAACCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CAA 72 bp GCCCCCGGCGCCGGCATTCCGGGCGTCGAGCACATCTaGACGGCGCGGCGCGGCCCCCACTTCCGGAAATTA +
Preference number: 6 (lower is better)
Translates to: APGAGIPGVEHI*TARRGPHFRKL
Trigger: TAATTTCCGGAAGTGGGGGCCGCGCCGCGCCGTCAAGATGTGCTCGACGCCCGGAATGCCGGCGCCGGGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 72 bp GCGGCCCTCGTCCAGCAGGAAGACACGGCTCTCCTGTaGCTGCCGGCTGACCACGCGGCAGCGGTGCCACAA +
Preference number: 6 (lower is better)
Translates to: AALVQQEDTALL*LPADHAAAVPQ
Trigger: TTGTGGCACCGCTGCCGCGTGGTCAGCCGGCAGGCACAGGAGAGCCGTGTCTTCCTGCTGGACGAGGGCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CAA 90 bp GGCACCAGGCCCGCTAGCACGCAGCCCAGCACTTCCGAGGGCAAATaGAAGAACTCTCTGCGCCCAGGCGCCAGCGAGCCTGCTCCGGCC +
Preference number: 6 (lower is better)
Translates to: GTRPASTQPSTSEGK*KNSLRPGASEPAPA
Trigger: GGCCGGAGCAGGCTCGCTGGCGCCTGGGCGCAGAGAGTTCTTCAATTTGCCCTCGGAAGTGCTGGGCTGCGTGCTAGCGGGCCTGGTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 72 bp TACTCGCCCCGCCGCTCGCCCACCAGCCCCCACAGCTaGACCGGGATCACATCGGGATGCACGTCCACGAAG +
Preference number: 6 (lower is better)
Translates to: YSPRRSPTSPHS*TGITSGCTSTK
Trigger: CTTCGTGGACGTGCATCCCGATGTGATCCCGGTGCAGCTGTGGGGGCTGGTGGGCGAGCGGCGGGGCGAGTA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CAA 90 bp GAGGCTGTCGGGCACCCGCCGAGCCAGGCCCAGCTCCCGCATCTGTaGGAACACATCAGGCACCTCCAGGAGGACCAGGCGATGGAGCAG +
Preference number: 6 (lower is better)
Translates to: EAVGHPPSQAQLPHL*EHIRHLQEDQAMEQ
Trigger: CTGCTCCATCGCCTGGTCCTCCTGGAGGTGCCTGATGTGTTCCAACAGATGCGGGAGCTGGGCCTGGCTCGGCGGGTGCCCGACAGCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 72 bp CCAGCAGGAAGACACGGCTCTCCTGTGCCTGCCGGCTaGCCACGCGGCAGCGGTGCCACAAAAGCCCGACCT +
Preference number: 6 (lower is better)
Translates to: PAGRHGSPVPAG*PRGSGATKARP
Trigger: AGGTCGGGCTTTTGTGGCACCGCTGCCGCGTGGTCAGCCGGCAGGCACAGGAGAGCCGTGTCTTCCTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 72 bp ACCAGCCCCCACAGCTGCACCGGGATCACATCGGGATaGACGTCCACGAAGGACACCCGCAGGGCCAGCGAG +
Preference number: 6 (lower is better)
Translates to: TSPHSCTGITSG*TSTKDTRRASE
Trigger: CTCGCTGGCCCTGCGGGTGTCCTTCGTGGACGTGCATCCCGATGTGATCCCGGTGCAGCTGTGGGGGCTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 72 bp ATTGAAGAACTCTCTGCGCCCAGGCGCCAGCGAGCCTaGTCCGGCCGTGATGGTGCGGCCCTCGTCCAGCAG +
Preference number: 6 (lower is better)
Translates to: IEELSAPRRQRA*SGRDGAALVQQ
Trigger: CTGCTGGACGAGGGCCGCACCATCACGGCCGGAGCAGGCTCGCTGGCGCCTGGGCGCAGAGAGTTCTTCAAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CAA 90 bp CGAGACGCTGCGGAGCTGGCAGTGAATGCGGTGGGGATGGCACACTaGGGTTATGACCACGGCCTCCGTCACGCCCAGCTGCAGCTGGGG +
Preference number: 6 (lower is better)
Translates to: RDAAELAVNAVGMAH*GYDHGLRHAQLQLG
Trigger: CCCCAGCTGCAGCTGGGCGTGACGGAGGCCGTGGTCATAACCCAAGTGTGCCATCCCCACCGCATTCACTGCCAGCTCCGCAGCGTCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 72 bp AGCACGTCCAGGACGCACCCGTGCACCTCCTTGCCCTaGAGGTTGCTAAGGAAGTCCACGGCGTCGGCGGGC +
Preference number: 6 (lower is better)
Translates to: STSRTHPCTSLP*RLLRKSTASAG
Trigger: GCCCGCCGACGCCGTGGACTTCCTTAGCAACCTTCAGGGCAAGGAGGTGCACGGGTGCGTCCTGGACGTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 72 bp GCCGCGCCTCAGGGCCTCGAAATCCTCCGCGCCGCCTaGAGGCGAGTCCCAGCCAAACTAGGTTCAAAGGAC +
Preference number: 6 (lower is better)
Translates to: AAPQGLEILRAA*RRVPAKLGSKD
Trigger: GTCCTTTGAACCTAGTTTGGCTGGGACTCGCCTTCAGGCGGCGCGGAGGATTTCGAGGCCCTGAGGCGCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 72 bp CCGCTAGCACGCAGCCCAGCACTTCCGAGGGCAAATTaGAGAACTCTCTGCGCCCAGGCGCCAGCGAGCCTG +
Preference number: 6 (lower is better)
Translates to: PLARSPALPRAN*RTLCAQAPASL
Trigger: CAGGCTCGCTGGCGCCTGGGCGCAGAGAGTTCTTCAATTTGCCCTCGGAAGTGCTGGGCTGCGTGCTAGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 72 bp TGCTCTCGGAGAGGCGGTGGATCTCCTGCGAGACGCTaGGGAGCTGGCAGTGAATGCGGTGGGGATGGCACA +
Preference number: 6 (lower is better)
Translates to: CSRRGGGSPARR*GAGSECGGDGT
Trigger: TGTGCCATCCCCACCGCATTCACTGCCAGCTCCGCAGCGTCTCGCAGGAGATCCACCGCCTCTCCGAGAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CCA 72 bp TGGAACACATCAGGCACCTCCAGGAGGACCAGGCGATaGAGCAGCAGCACGTCCAGGACGCACCCGTGCACC +
Preference number: 6 (lower is better)
Translates to: WNTSGTSRRTRR*SSSTSRTHPCT
Trigger: GGTGCACGGGTGCGTCCTGGACGTGCTGCTGCTCCATCGCCTGGTCCTCCTGGAGGTGCCTGATGTGTTCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CAA 72 bp CCCGCTAGCACGCAGCCCAGCACTTCCGAGGGCAAATaGAAGAACTCTCTGCGCCCAGGCGCCAGCGAGCCT +
Preference number: 6 (lower is better)
Translates to: PASTQPSTSEGK*KNSLRPGASEP
Trigger: AGGCTCGCTGGCGCCTGGGCGCAGAGAGTTCTTCAATTTGCCCTCGGAAGTGCTGGGCTGCGTGCTAGCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CAA 72 bp GCGGAGCTGGCAGTGAATGCGGTGGGGATGGCACACTaGGGTTATGACCACGGCCTCCGTCACGCCCAGCTG +
Preference number: 6 (lower is better)
Translates to: AELAVNAVGMAH*GYDHGLRHAQL
Trigger: CAGCTGGGCGTGACGGAGGCCGTGGTCATAACCCAAGTGTGCCATCCCCACCGCATTCACTGCCAGCTCCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CAA 90 bp GCCCAGCTGCAGCTGGGGATAGAAGTAATCCAGACCAGGCTGCTTTaGCTTGAGCGGGACTCGCGAGAGAACCGGGACCCCGGAGCCCAC +
Preference number: 6 (lower is better)
Translates to: AQLQLGIEVIQTRLL*LERDSRENRDPGAH
Trigger: GTGGGCTCCGGGGTCCCGGTTCTCTCGCGAGTCCCGCTCAAGCAAAAGCAGCCTGGTCTGGATTACTTCTATCCCCAGCTGCAGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CAA 72 bp CAGCTGGGGATAGAAGTAATCCAGACCAGGCTGCTTTaGCTTGAGCGGGACTCGCGAGAGAACCGGGACCCC +
Preference number: 6 (lower is better)
Translates to: QLGIEVIQTRLL*LERDSRENRDP
Trigger: GGGGTCCCGGTTCTCTCGCGAGTCCCGCTCAAGCAAAAGCAGCCTGGTCTGGATTACTTCTATCCCCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 72 bp GGCACAGCGCTGGGGCCGAAAAGTCTCAAGCAACAGTaGTCTGTACCAATGTCCATCCAGGCCACAGGATGC +
Preference number: 6 (lower is better)
Translates to: GTALGPKSLKQQ*SVPMSIQATGC
Trigger: GCATCCTGTGGCCTGGATGGACATTGGTACAGAGCACTGTTGCTTGAGACTTTTCGGCCCCAGCGCTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CCA 72 bp GTAAATAGCTCCATGGCGCCTTTTGTGACACACTCTTaGGAGAGTGGCACATTCGGTGGCACCGGGCTTAGC +
Preference number: 6 (lower is better)
Translates to: VNSSMAPFVTHS*ESGTFGGTGLS
Trigger: GCTAAGCCCGGTGCCACCGAATGTGCCACTCTCCCAAGAGTGTGTCACAAAAGGCGCCATGGAGCTATTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CCA 72 bp AGGCTTGCATGGGAACCGACAGAAGTTCAGAAGGAATaGCCCAGAGTGCTTTTGGGTCCACACAGTCTTCAA +
Preference number: 6 (lower is better)
Translates to: RLAWEPTEVQKE*PRVLLGPHSLQ
Trigger: TTGAAGACTGTGTGGACCCAAAAGCACTCTGGGCCATTCCTTCTGAACTTCTGTCGGTTCCCATGCAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 72 bp TCTGGCTGTTTCTCAGCTTCACAGCTGAGAGGAAGCTaGAGTGTAAATAGCTCCATGGCGCCTTTTGTGACA +
Preference number: 6 (lower is better)
Translates to: SGCFSASQLRGS*SVNSSMAPFVT
Trigger: TGTCACAAAAGGCGCCATGGAGCTATTTACACTGCAGCTTCCTCTCAGCTGTGAAGCTGAGAAACAGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 72 bp GTGCACTTCACAGCCAATATTGGTAGCTGCCTAAACTaGGGAAGCAGCATCCTTACGTCATACCAGTCCACA +
Preference number: 6 (lower is better)
Translates to: VHFTANIGSCLN*GSSILTSYQST
Trigger: TGTGGACTGGTATGACGTAAGGATGCTGCTTCCTCAGTTTAGGCAGCTACCAATATTGGCTGTGAAGTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CCA 72 bp CGACAGAAGTTCAGAAGGAATGGCCCAGAGTGCTTTTaGGTCCACACAGTCTTCAATGTTTCCAAAGTCCAC +
Preference number: 6 (lower is better)
Translates to: RQKFRRNGPECF*VHTVFNVSKVH
Trigger: GTGGACTTTGGAAACATTGAAGACTGTGTGGACCCAAAAGCACTCTGGGCCATTCCTTCTGAACTTCTGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CAA 72 bp CCGACAGAAGTTCAGAAGGAATGGCCCAGAGTGCTTTaGGGTCCACACAGTCTTCAATGTTTCCAAAGTCCA +
Preference number: 6 (lower is better)
Translates to: PTEVQKEWPRVL*GPHSLQCFQSP
Trigger: TGGACTTTGGAAACATTGAAGACTGTGTGGACCCAAAAGCACTCTGGGCCATTCCTTCTGAACTTCTGTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CAA 90 bp CTCTTGGCTTTCTGCTCTCCTTCTCCAGTCTTGGCAAAAGGTATTTaGTTACTCTCCGTAGTAAAGTGGTTTGAAACATGCCCTGGGGAG +
Preference number: 6 (lower is better)
Translates to: LLAFCSPSPVLAKGI*LLSVVKWFETCPGE
Trigger: CTCCCCAGGGCATGTTTCAAACCACTTTACTACGGAGAGTAACAAAATACCTTTTGCCAAGACTGGAGAAGGAGAGCAGAAAGCCAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 72 bp GCATTCGAAAATATTCAGGCAGCAAGTACCGAAGGCTaGTGCAACTCACTAACTCCTTCCTTCCATAGTCCA +
Preference number: 6 (lower is better)
Translates to: AFENIQAASTEG*CNSLTPSFHSP
Trigger: TGGACTATGGAAGGAAGGAGTTAGTGAGTTGCAGCAGCCTTCGGTACTTGCTGCCTGAATATTTTCGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CAA 72 bp CTTTGGGATACAGCCTCAGGTGGACTCTTATCCAATTaGGGTATGCCATTCCAGACATTCTCAGGGTTCACT +
Preference number: 6 (lower is better)
Translates to: LWDTASGGLLSN*GMPFQTFSGFT
Trigger: AGTGAACCCTGAGAATGTCTGGAATGGCATACCCAAATTGGATAAGAGTCCACCTGAGGCTGTATCCCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450697.1
CDS GCA 72 bp TTCGAAAATATTCAGGCAGCAAGTACCGAAGGCTGCTaGAACTCACTAACTCCTTCCTTCCATAGTCCACAT +
Preference number: 6 (lower is better)
Translates to: FENIQAASTEGC*NSLTPSFHSPH
Trigger: ATGTGGACTATGGAAGGAAGGAGTTAGTGAGTTGCAGCAGCCTTCGGTACTTGCTGCCTGAATATTTTCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 72 bp CCCTTTTCTCAGGTGGACTCTTATCCAATTTGGGTATaGCATTCCAGACATTCTCAGGGTTCACTATCTCCT +
Preference number: 6 (lower is better)
Translates to: PFSQVDSYPIWV*HSRHSQGSLSP
Trigger: AGGAGATAGTGAACCCTGAGAATGTCTGGAATGGCATACCCAAATTGGATAAGAGTCCACCTGAGAAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316081.11
CDS GCA 72 bp ATACAGCCTCAGGTGGACTCTTATCCAATTTGGGTATaGCATTCCAGACATTCTCAGGGTTCACTATCTCCT +
Preference number: 6 (lower is better)
Translates to: IQPQVDSYPIWV*HSRHSQGSLSP
Trigger: AGGAGATAGTGAACCCTGAGAATGTCTGGAATGGCATACCCAAATTGGATAAGAGTCCACCTGAGGCTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450697.1
CDS CCA 72 bp CCAAACCCCTTTTCTCAGGTGGACTCTTATCCAATTTaGGTATGCCATTCCAGACATTCTCAGGGTTCACTA +
Preference number: 6 (lower is better)
Translates to: PNPFSQVDSYPI*VCHSRHSQGSL
Trigger: TAGTGAACCCTGAGAATGTCTGGAATGGCATACCCAAATTGGATAAGAGTCCACCTGAGAAAAGGGGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316081.11
CDS CCA 72 bp TTTGGGATACAGCCTCAGGTGGACTCTTATCCAATTTaGGTATGCCATTCCAGACATTCTCAGGGTTCACTA +
Preference number: 6 (lower is better)
Translates to: FGIQPQVDSYPI*VCHSRHSQGSL
Trigger: TAGTGAACCCTGAGAATGTCTGGAATGGCATACCCAAATTGGATAAGAGTCCACCTGAGGCTGTATCCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450697.1
CDS CAA 72 bp TCCAAACCCCTTTTCTCAGGTGGACTCTTATCCAATTaGGGTATGCCATTCCAGACATTCTCAGGGTTCACT +
Preference number: 6 (lower is better)
Translates to: SKPLFSGGLLSN*GMPFQTFSGFT
Trigger: AGTGAACCCTGAGAATGTCTGGAATGGCATACCCAAATTGGATAAGAGTCCACCTGAGAAAAGGGGTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316081.11
CDS CAA 90 bp GTAGCTGAACAGAGGACTCCAAAGGCTTCTGAAGTTTTACTGGTCTaGCAAGTCTCTTTTCTACCAAGAAATGGCATGCACTCTGAAAGG +
Preference number: 6 (lower is better)
Translates to: VAEQRTPKASEVLLV*QVSFLPRNGMHSER
Trigger: CCTTTCAGAGTGCATGCCATTTCTTGGTAGAAAAGAGACTTGCAAGACCAGTAAAACTTCAGAAGCCTTTGGAGTCCTCTGTTCAGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 72 bp ACTGCACAGAGAGAAGGTCATTGGGTTGTTGCTCCTTaGTCACAGCACGATACCATAAATTATCTTCTGGGA +
Preference number: 6 (lower is better)
Translates to: TAQREGHWVVAP*SQHDTINYLLG
Trigger: TCCCAGAAGATAATTTATGGTATCGTGCTGTGATCAAGGAGCAACAACCCAATGACCTTCTCTCTGTGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 72 bp TTATTGTCAGGAACCTCAAATCCCTGCAAGGAGCAATaGATGCACAACCCCGGCAATATTGCATTAACAAGG +
Preference number: 6 (lower is better)
Translates to: LLSGTSNPCKEQ*MHNPGNIALTR
Trigger: CCTTGTTAATGCAATATTGCCGGGGTTGTGCATTCATTGCTCCTTGCAGGGATTTGAGGTTCCTGACAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 72 bp CATCCTGCGCTGGTCATCAAAAGATTCTACACAACTTaGCTTTCTCATGTCCTCAGTACACATGGATTCCTG +
Preference number: 6 (lower is better)
Translates to: HPALVIKRFYTT*LSHVLSTHGFL
Trigger: CAGGAATCCATGTGTACTGAGGACATGAGAAAGTCAAGTTGTGTAGAATCTTTTGATGACCAGCGCAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 72 bp GCATCCTTACGTCATACCAGTCCACATTTTCCGAATTaGCTCGGTCAACTAAGAATACATCCACACTCTTGT +
Preference number: 6 (lower is better)
Translates to: ASLRHTSPHFPN*LGQLRIHPHSC
Trigger: ACAAGAGTGTGGATGTATTCTTAGTTGACCGAGGCAATTCGGAAAATGTGGACTGGTATGACGTAAGGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 72 bp GATCTGGTAAACCATTATTGTGCTTGCTTCCATCACTaGTTTCTTCCTCAGAGAACAAAGGCATCAATGCCG +
Preference number: 6 (lower is better)
Translates to: DLVNHYCACFHH*FLPQRTKASMP
Trigger: CGGCATTGATGCCTTTGTTCTCTGAGGAAGAAAGCAGTGATGGAAGCAAGCACAATAATGGTTTACCAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316081.11
ENST00000450697.1
ENST00000544460.5
CDS CCA 72 bp AAAGACAAAGGATCCATCTTGTCATCTAAAGGCAGCTaGGCTGTAGGTAGTTCTAGTTCTGGCTGTTTCTCA +
Preference number: 6 (lower is better)
Translates to: KDKGSILSSKGS*AVGSSSSGCFS
Trigger: TGAGAAACAGCCAGAACTAGAACTACCTACAGCCCAGCTGCCTTTAGATGACAAGATGGATCCTTTGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CAA 72 bp AGCATCCTTACGTCATACCAGTCCACATTTTCCGAATaGCCTCGGTCAACTAAGAATACATCCACACTCTTG +
Preference number: 6 (lower is better)
Translates to: SILTSYQSTFSE*PRSTKNTSTLL
Trigger: CAAGAGTGTGGATGTATTCTTAGTTGACCGAGGCAATTCGGAAAATGTGGACTGGTATGACGTAAGGATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CAA 72 bp CAGAGGACTCCAAAGGCTTCTGAAGTTTTACTGGTCTaGCAAGTCTCTTTTCTACCAAGAAATGGCATGCAC +
Preference number: 6 (lower is better)
Translates to: QRTPKASEVLLV*QVSFLPRNGMH
Trigger: GTGCATGCCATTTCTTGGTAGAAAAGAGACTTGCAAGACCAGTAAAACTTCAGAAGCCTTTGGAGTCCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CAA 72 bp AACTGCACAGAGAGAAGGTCATTGGGTTGTTGCTCCTaGATCACAGCACGATACCATAAATTATCTTCTGGG +
Preference number: 6 (lower is better)
Translates to: NCTERRSLGCCS*ITARYHKLSSG
Trigger: CCCAGAAGATAATTTATGGTATCGTGCTGTGATCAAGGAGCAACAACCCAATGACCTTCTCTCTGTGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CAA 90 bp GATGCAATGACATCCTGCGCTGGTCATCAAAAGATTCTACACAACTaGACTTTCTCATGTCCTCAGTACACATGGATTCCTGTGCTTTCT +
Preference number: 6 (lower is better)
Translates to: DAMTSCAGHQKILHN*TFSCPQYTWIPVLS
Trigger: AGAAAGCACAGGAATCCATGTGTACTGAGGACATGAGAAAGTCAAGTTGTGTAGAATCTTTTGATGACCAGCGCAGGATGTCATTGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 72 bp CTCATGTCCTCAGTACACATGGATTCCTGTGCTTTCTaGCTAACTCCTAAAGACAAAGGATCCATCTTGTCA +
Preference number: 6 (lower is better)
Translates to: LMSSVHMDSCAF*LTPKDKGSILS
Trigger: TGACAAGATGGATCCTTTGTCTTTAGGAGTTAGTCAGAAAGCACAGGAATCCATGTGTACTGAGGACATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 72 bp CTGCAAGGAGCAATGAATGCACAACCCCGGCAATATTaGATTAACAAGGTCAAGCCTACCTATTTTGTTAGT +
Preference number: 6 (lower is better)
Translates to: LQGAMNAQPRQY*INKVKPTYFVS
Trigger: ACTAACAAAATAGGTAGGCTTGACCTTGTTAATGCAATATTGCCGGGGTTGTGCATTCATTGCTCCTTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 72 bp GATCACAATCTGCTCCATGTAGATGCAATGACATCCTaGGCTGGTCATCAAAAGATTCTACACAACTTGACT +
Preference number: 6 (lower is better)
Translates to: DHNLLHVDAMTS*AGHQKILHNLT
Trigger: AGTCAAGTTGTGTAGAATCTTTTGATGACCAGCGCAGGATGTCATTGCATCTACATGGAGCAGATTGTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CAA 72 bp CCACACATTCTCCTCATCAGCTTACTGAAGGTGACATaGTGTTTCCTCAACCTAATCCAAAACTCAGAAGGA +
Preference number: 6 (lower is better)
Translates to: PHILLISLLKVT*CFLNLIQNSEG
Trigger: TCCTTCTGAGTTTTGGATTAGGTTGAGGAAACACAATGTCACCTTCAGTAAGCTGATGAGGAGAATGTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CAA 72 bp ACATCCTGCGCTGGTCATCAAAAGATTCTACACAACTaGACTTTCTCATGTCCTCAGTACACATGGATTCCT +
Preference number: 6 (lower is better)
Translates to: TSCAGHQKILHN*TFSCPQYTWIP
Trigger: AGGAATCCATGTGTACTGAGGACATGAGAAAGTCAAGTTGTGTAGAATCTTTTGATGACCAGCGCAGGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CAA 72 bp AGACATTCTCAGGGTTCACTATCTCCTCCATACCATTaGAAAGGTTCAAAACCCTTGTTCCTTCTTCAGCTG +
Preference number: 6 (lower is better)
Translates to: RHSQGSLSPPYH*KGSKPLFLLQL
Trigger: CAGCTGAAGAAGGAACAAGGGTTTTGAACCTTTCAAATGGTATGGAGGAGATAGTGAACCCTGAGAATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000450697.1
CDS TCA 72 bp GCAAGTCTCTTTTCTACCAAGAAATGGCATGCACTCTaGAAGGGGGTTAGCAAATCCACAATGTTAAACAGT +
Preference number: 6 (lower is better)
Translates to: ASLFSTKKWHAL*KGVSKSTMLNS
Trigger: ACTGTTTAACATTGTGGATTTGCTAACCCCCTTTCAGAGTGCATGCCATTTCTTGGTAGAAAAGAGACTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 72 bp TTCTGTGTTTTAGGATCACAATCTGCTCCATGTAGATaGAATGACATCCTGCGCTGGTCATCAAAAGATTCT +
Preference number: 6 (lower is better)
Translates to: FCVLGSQSAPCR*NDILRWSSKDS
Trigger: AGAATCTTTTGATGACCAGCGCAGGATGTCATTGCATCTACATGGAGCAGATTGTGATCCTAAAACACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 72 bp GAGCTGAGATATGATCTGGTAAACCATTATTGTGCTTaGTTCCATCACTGCTTTCTTCCTCAGAGAACAAAG +
Preference number: 6 (lower is better)
Translates to: ELRYDLVNHYCA*FHHCFLPQRTK
Trigger: CTTTGTTCTCTGAGGAAGAAAGCAGTGATGGAAGCAAGCACAATAATGGTTTACCAGATCATATCTCAGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316081.11
ENST00000450697.1
ENST00000544460.5
CDS CAA 72 bp ATCTTCTGGGAAAACAGCACATATCATATCTCCTCTTaGCAAAGGTGGACCTACATAATATTCGGGCCTTGT +
Preference number: 6 (lower is better)
Translates to: IFWENSTYHISS*QRWTYIIFGPC
Trigger: ACAAGGCCCGAATATTATGTAGGTCCACCTTTGCAAAGAGGAGATATGATATGTGCTGTTTTCCCAGAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 72 bp TCCAAACCCCTTTTCTTTAATAGTGGTATCACCCACTaGCATGAAGTAAAGATCTTTCCCTACTCTTTGGGA +
Preference number: 6 (lower is better)
Translates to: SKPLFFNSGITH*HEVKIFPYSLG
Trigger: TCCCAAAGAGTAGGGAAAGATCTTTACTTCATGTCAGTGGGTGATACCACTATTAAAGAAAAGGGGTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450697.1
CDS GCA 72 bp TCTATAAACTGCACAGAGAGAAGGTCATTGGGTTGTTaGTCCTTGATCACAGCACGATACCATAAATTATCT +
Preference number: 6 (lower is better)
Translates to: SINCTERRSLGC*SLITARYHKLS
Trigger: AGATAATTTATGGTATCGTGCTGTGATCAAGGAGCAACAACCCAATGACCTTCTCTCTGTGCAGTTTATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CAA 90 bp AATGTGTTAAATCCTGTAATCAGGTATTTATCATCAAACTCTGCTTaGTCAACCAGATGGCACTCTAATTCACCTTCCAGTTCCTCAGTA +
Preference number: 6 (lower is better)
Translates to: NVLNPVIRYLSSNSA*STRWHSNSPSSSSV
Trigger: TACTGAGGAACTGGAAGGTGAATTAGAGTGCCATCTGGTTGACAAAGCAGAGTTTGATGATAAATACCTGATTACAGGATTTAACACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 72 bp CTGGTATATGATCAGGAATATCAGATAATGAACATCTaGCAGCTTGCATGGGCAAAAGTAAGACATCATATG +
Preference number: 6 (lower is better)
Translates to: LVYDQEYQIMNI*QLAWAKVRHHM
Trigger: CATATGATGTCTTACTTTTGCCCATGCAAGCTGTCAGATGTTCATTATCTGATATTCCTGATCATATACCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS GCA 72 bp TTTTTCACTGAGAGCATACCTGCTAATCATATCATCTaGTATGATCCCATGTTCATCAGCAAGAATAACTTC +
Preference number: 6 (lower is better)
Translates to: FFTESIPANHII*YDPMFISKNNF
Trigger: GAAGTTATTCTTGCTGATGAACATGGGATCATAGCAGATGATATGATTAGCAGGTATGCTCTCAGTGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CCA 72 bp TTTCTTCCTCAGAGAACAAAGGCATCAATGCCGAAATaGCATCCCTGTTTTTATACTCTACAAATTCTTCTT +
Preference number: 6 (lower is better)
Translates to: FLPQRTKASMPK*HPCFYTLQILL
Trigger: AAGAAGAATTTGTAGAGTATAAAAACAGGGATGCCATTTCGGCATTGATGCCTTTGTTCTCTGAGGAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316081.11
ENST00000450697.1
ENST00000544460.5
CDS CAA 72 bp GCACAACTAGTTCAGTTGAACCATTTGTTACAACTGTaGTGTCACTCAAAGCTTTTGAAACAGATGTGGTTT +
Preference number: 6 (lower is better)
Translates to: AQLVQLNHLLQL*CHSKLLKQMWF
Trigger: AAACCACATCTGTTTCAAAAGCTTTGAGTGACACAACAGTTGTAACAAATGGTTCAACTGAACTAGTTGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CAA 72 bp ATGCTCTTTTCACTTTTTCCTGCACAACTAGTTCAGTaGAACCATTTGTTACAACTGTTGTGTCACTCAAAG +
Preference number: 6 (lower is better)
Translates to: MLFSLFPAQLVQ*NHLLQLLCHSK
Trigger: CTTTGAGTGACACAACAGTTGTAACAAATGGTTCAACTGAACTAGTTGTGCAGGAAAAAGTGAAAAGAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CAA 90 bp CCTTCACAAATGTTATCAGTTTTAGGGTCACGGAAGTTACTTGGTTaGGTTCCAATAATGTTTACATCTTTTTCAGTTATTTCAGCAAGC +
Preference number: 6 (lower is better)
Translates to: PSQMLSVLGSRKLLG*VPIMFTSFSVISAS
Trigger: GCTTGCTGAAATAACTGAAAAAGATGTAAACATTATTGGAACCAAACCAAGTAACTTCCGTGACCCTAAAACTGATAACATTTGTGAAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 72 bp CTGGCACTTTTAATTACTTGGGTAGAAAGTTCTACTTaGGATTTTTCACTGAGAGCATACCTGCTAATCATA +
Preference number: 6 (lower is better)
Translates to: LALLITWVESST*DFSLRAYLLII
Trigger: TATGATTAGCAGGTATGCTCTCAGTGAAAAATCTCAAGTAGAACTTTCTACCCAAGTAATTAAAAGTGCCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS CAA 72 bp ACTGGCACTTTTAATTACTTGGGTAGAAAGTTCTACTaGAGATTTTTCACTGAGAGCATACCTGCTAATCAT +
Preference number: 6 (lower is better)
Translates to: TGTFNYLGRKFY*RFFTESIPANH
Trigger: ATGATTAGCAGGTATGCTCTCAGTGAAAAATCTCAAGTAGAACTTTCTACCCAAGTAATTAAAAGTGCCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5
CDS TCA 72 bp CAACAATTGCTAAAGGGATATCACAAACATCCCTTCTaGTTTCTAGTATTGTTATTTCCAACACATCTTCTG +
Preference number: 6 (lower is better)
Translates to: QQLLKGYHKHPF*FLVLLFPTHLL
Trigger: CAGAAGATGTGTTGGAAATAACAATACTAGAAATCAGAAGGGATGTTTGTGATATCCCTTTAGCAATTGTTG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316081.11
ENST00000544460.5