RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TDRD5 (Homo sapiens)

Ensembl gene IDs: ENSG00000162782

Ensembl transcript IDs: ENST00000294848.12, ENST00000367614.5, ENST00000417329.1, ENST00000444136.6

Found 392 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCGCCAGTCACCCGTCTTaGCCCCACCGCGCCCTGACG +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPASHPS*PHRALT
Trigger: CGTCAGGGCGCGGTGGGGGCAAGACGGGTGACTGGC...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS-3UTR GCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCCCGGCACCGCCCTGCTaGCAGTCACCCGTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPPAPPC*QSPVLP
Trigger: GGGCAAGACGGGTGACTGGCAGCAGGGCGGTGCCGG...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS-3UTR GCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCGGGTGCCCTGCGGCTTaGGCGTGGCCGGGCGATTCA +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPGCPAA*AWPGDS
Trigger: TGAATCGCCCGGCCACGCGCAAGCCGCAGGGCACCC...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS-3UTR CCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCCCTGCGGCTTGCGCGTaGCCGGGCGATTCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPPAACA*PGDSSP
Trigger: AGGGCTTGAATCGCCCGGCCACGCGCAAGCCGCAGG...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS-3UTR GCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCGGCCCGGCACCGCCCTaGTGCCAGTCACCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLGPAPP*CQSPVL
Trigger: CAAGACGGGTGACTGGCAGCAGGGCGGTGCCGGGCC...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS-3UTR GCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCCGTGGCCCTTCCACCTaGCCTGGCGGCTCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPRGPST*PGGSLQ
Trigger: TTGCAGAGAGCCGCCAGGGCAGGTGGAAGGGCCACG...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS-3UTR GCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCGGCACCGCCCTGCTaGCAGTCACCCGTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPPAPPC*QSPVLP
Trigger: GGGCAAGACGGGTGACTGGCAGCAGGGCGGTGCCGG...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS-3UTR GCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCAGTATGAGGGTGCCCTaGGGCTTGCGCGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLSMRVP*GLRVAG
Trigger: CCCGGCCACGCGCAAGCCGCAGGGCACCCTCATACT...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS-3UTR TCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCCCCAACGTCTCTCGGTaGCCCTCACGGGAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGPNVSR*PSRERG
Trigger: GCCCCGCTCCCGTGAGGGTCACCGAGAGACGTTGGG...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS-3UTR GCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGCGTGGCCCTTCCACCTaGCCTGGCGGCTCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLRGPST*PGGSLQ
Trigger: TTGCAGAGAGCCGCCAGGGCAGGTGGAAGGGCCACG...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS-3UTR CCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCTGTGCCCTACAGGACTaGTCTAGGGTTGGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPCALQD*SRVGVP
Trigger: AGGGACCCCAACCCTAGACCAGTCCTGTAGGGCACA...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS-3UTR GCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCGCCCTGGCGGCTCTCTaGAACCTGAGGTGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLALAAL*NLRWKG
Trigger: TCCTTTCCACCTCAGGTTGCAGAGAGCCGCCAGGGC...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS-3UTR GCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCCTCCCGTCTGCTGACTaGTCTGACTGGGTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPLPSAD*SDWVRE
Trigger: CTCTCTTACCCAGTCAGAGCAGTCAGCAGACGGGAG...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR GCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGCTCTGCCCCTGGCCATaGGGAGGCGTTAACTGGGGT +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLLCPWP*GGVNWG
Trigger: ACCCCAGTTAACGCCTCCGCATGGCCAGGGGCAGAG...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS-3UTR CCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCGTTCGGCACAGCGTCTaGCGGGATGTCATGATTTGC +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPVRHSV*RDVMIC
Trigger: GCAAATCATGACATCCCGCCAGACGCTGTGCCGAAC...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCTTGTGTAGCAGCACTTaGGGAACCTCAGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPLCSST*GTSGRT
Trigger: AGTCCTCCCTGAGGTTCCTCAAGTGCTGCTACACAA...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCATCCACTGCAGTTGTTaGACAGGGTGCTGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPIHCSC*TGCCCG
Trigger: TCCACAGCAGCACCCTGTTCAACAACTGCAGTGGAT...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR GCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCTATTACAGTACCACCTaGACCGGGGCAGACACGAAC +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPYYSTT*TGADTN
Trigger: GTTCGTGTCTGCCCCGGTGCAGGTGGTACTGTAATA...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCCAAGACAATGTCCTCTaGCCCTCCACTGGATGTCGT +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPQDNVL*PSTGCR
Trigger: ACGACATCCAGTGGAGGGCCAGAGGACATTGTCTTG...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCGAGTCTGACTGTTGTTaGGTTCAGACTGGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPESDCC*VQTGSR
Trigger: ACGGGAGCCAGTCTGAACCCAACAACAGTCAGACTC...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCCCATCCTTTTCACACTaGGGTACCAGTGTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPPSFSH*GTSVGG
Trigger: GCCTCCTACACTGGTACCCCAGTGTGAAAAGGATGG...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCCGGCTCTCTGCAACCTaGGGTGGAAAGGAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGRLSAT*GGKEGR
Trigger: CCTGCCTTCCTTTCCACCTCAGGTTGCAGAGAGCCG...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS-3UTR TCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTACCCAACGTCTCTCGGTaGCCCTCACGGGAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLPNVSR*PSRERG
Trigger: GCCCCGCTCCCGTGAGGGTCACCGAGAGACGTTGGG...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS-3UTR TCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGCAGAAGTAGTAGTATaGGGGTGCCCTGCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLAEVVV*GCPAAC
Trigger: GCAAGCCGCAGGGCACCCTCATACTACTACTTCTGC...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS-3UTR GCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAGGCCCGGCACCGCCCTaGTGCCAGTCACCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLGPAPP*CQSPVL
Trigger: CAAGACGGGTGACTGGCAGCAGGGCGGTGCCGGGCC...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS-3UTR GCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCGCCCTGGCGGCTCTCTaGAACCTGAGGTGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGALAAL*NLRWKG
Trigger: TCCTTTCCACCTCAGGTTGCAGAGAGCCGCCAGGGC...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS-3UTR GCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCGTCTGCTGACTaGTCTGACTGGGTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLLPSAD*SDWVRE
Trigger: CTCTCTTACCCAGTCAGAGCAGTCAGCAGACGGGAG...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR GCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCTCCCTCCCTCCCTCATaGTTCCATCCTTTTCACACT +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPSLPPS*FHPFHT
Trigger: AGTGTGAAAAGGATGGAAGCATGAGGGAGGGAGGGA...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCAGGGATAGCCTGAGCTaGAAGCTTTGTGTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPRDSLS*KLCVAA
Trigger: TGCTGCTACACAAAGCTTCCAGCTCAGGCTATCCCT...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCCCAGTGTTCCTCTACTaGTCTCACCCAAGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPPVFLY*SHPSQR
Trigger: TCTTTGGCTTGGGTGAGACCAGTAGAGGAACACTGG...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCGGCATGGCATTCCAGTaGGGATCTCATCCAAGATAC +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPGMAFQ*GSHPRY
Trigger: GTATCTTGGATGAGATCCCCACTGGAATGCCATGCC...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000367614.5
CDS-3UTR CCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCTTGTTGGGTTCAGACTaGCTCCCGTCTGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLLLGSD*LPSADC
Trigger: GCAGTCAGCAGACGGGAGCCAGTCTGAACCCAACAA...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCCACCTAAGGCAGCAGTaGCTGTACTTCGAGGAATGT +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPHLRQQ*LYFEEC
Trigger: ACATTCCTCGAAGTACAGCCACTGCTGCCTTAGGTG...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCCAGAGATGTCCCGGCTaGATAAAACATTCTGGCATG +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPQRCPG*IKHSGM
Trigger: CATGCCAGAATGTTTTATTCAGCCGGGACATCTCTG...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCTTGTGTAGCAGCACTTaGGGAACCTCAGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLLCSST*GTSGRT
Trigger: AGTCCTCCCTGAGGTTCCTCAAGTGCTGCTACACAA...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCATCACCTATGGTCACTaGCTCCAGGCATGGCATTCC +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLITYGH*LQAWHS
Trigger: GGAATGCCATGCCTGGAGTCAGTGACCATAGGTGAT...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR GCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCCGGGATGTCATGATTTaGCATTGCCAAGTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPRDVMI*HCQVEL
Trigger: GAGCTCAACTTGGCAATGGCAAATCATGACATCCCG...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCTCCCGTCTGCTGACTaGTCTGACTGGGTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPLPSAD*SDWVRE
Trigger: CTCTCTTACCCAGTCAGAGCAGTCAGCAGACGGGAG...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR GCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGCTCCCGTCTGCTGACTaGTCTGACTGGGTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLLPSAD*SDWVRE
Trigger: CTCTCTTACCCAGTCAGAGCAGTCAGCAGACGGGAG...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCTGCAACCTGAGGTaGAAAGGAAGGCAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFLCNLR*KGRQEA
Trigger: CGCCTCCTGCCTTCCTTTCCACCTCAGGTTGCAGAG...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS-3UTR CCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTTGTGCCCTACAGGACTaGTCTAGGGTTGGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFCALQD*SRVGVP
Trigger: AGGGACCCCAACCCTAGACCAGTCCTGTAGGGCACA...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS-3UTR CCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGTTCGGCACAGCGTCTaGCGGGATGTCATGATTTGC +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLVRHSV*RDVMIC
Trigger: GCAAATCATGACATCCCGCCAGACGCTGTGCCGAAC...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCAAGACAATGTCCTCTaGCCCTCCACTGGATGTCGT +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLQDNVL*PSTGCR
Trigger: ACGACATCCAGTGGAGGGCCAGAGGACATTGTCTTG...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCGCTGACTGCTCTGACTaGGTAAGAGAGGTACAGAAT +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPADCSD*VREVQN
Trigger: ATTCTGTACCTCTCTTACCCAGTCAGAGCAGTCAGC...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGTTGTTGGGTTCAGACTaGCTCCCGTCTGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLLLGSD*LPSADC
Trigger: GCAGTCAGCAGACGGGAGCCAGTCTGAACCCAACAA...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCGAGTCTGACTGTTGTTaGGTTCAGACTGGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLESDCC*VQTGSR
Trigger: ACGGGAGCCAGTCTGAACCCAACAACAGTCAGACTC...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCCAAAGCCTAAGCGGCTaGATTCTGTTTTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPQSLSG*ILFFSL
Trigger: GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTG...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCCAAGAACTCTGCCCCTaGCCATGCGGAGGCGTTAAC +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGQELCP*PCGGVN
Trigger: GTTAACGCCTCCGCATGGCCAGGGGCAGAGTTCTTG...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS-3UTR TCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCCTTGGTGTCCTTTCCTaGACTCAACATGGAGAATGT +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPLGVLS*TQHGEC
Trigger: ACATTCTCCATGTTGAGTTCAGGAAAGGACACCAAG...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCAGCAGCAGTAGACAATaGATTTCTAGGTGGACTGGA +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPSSSRQ*ISRWTG
Trigger: TCCAGTCCACCTAGAAATTCATTGTCTACTGCTGCT...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCCACAAAGACCCCTATaGGGGAACTGGTGTCTAATG +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLPQRPL*GNWCLM
Trigger: CATTAGACACCAGTTCCCTCATAGGGGTCTTTGTGG...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTTTGTGTAGCAGCACTTaGGGAACCTCAGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPLCSST*GTSGRT
Trigger: AGTCCTCCCTGAGGTTCCTCAAGTGCTGCTACACAA...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGATCACCTATGGTCACTaGCTCCAGGCATGGCATTCC +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLITYGH*LQAWHS
Trigger: GGAATGCCATGCCTGGAGTCAGTGACCATAGGTGAT...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTATCCACTGCAGTTGTTaGACAGGGTGCTGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPIHCSC*TGCCCG
Trigger: TCCACAGCAGCACCCTGTTCAACAACTGCAGTGGAT...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGATCCACTGCAGTTGTTaGACAGGGTGCTGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLIHCSC*TGCCCG
Trigger: TCCACAGCAGCACCCTGTTCAACAACTGCAGTGGAT...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCGGGCGATTCAAGCCCTaGATCTCCACCTGCGTTGAT +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGGRFKP*ISTCVD
Trigger: ATCAACGCAGGTGGAGATTCAGGGCTTGAATCGCCC...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS-3UTR GCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGTATTACAGTACCACCTaGACCGGGGCAGACACGAAC +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLYYSTT*TGADTN
Trigger: GTTCGTGTCTGCCCCGGTGCAGGTGGTACTGTAATA...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCCATCAACAAAGAACCTaGTCTGGTCTGCTCTACAGA +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPHQQRT*SGLLYR
Trigger: TCTGTAGAGCAGACCAGAGCAGGTTCTTTGTTGATG...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCACTCTGACGAATCCCTaGTATAGATCCGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPTLTNP*YRSGCR
Trigger: TCTACATCCGGATCTATAGCAGGGATTCGTCAGAGT...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCATTCGGAGTGGTAGATaGTTGCCAACCATCAAAAGG +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPIRSGR*LPTIKR
Trigger: CCTTTTGATGGTTGGCAACCATCTACCACTCCGAAT...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCAGGGATAGCCTGAGCTaGAAGCTTTGTGTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLRDSLS*KLCVAA
Trigger: TGCTGCTACACAAAGCTTCCAGCTCAGGCTATCCCT...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCCTCTGGCCCTCCACTaGATGTCGTGTATAAAGCTA +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLPLALH*MSCIKL
Trigger: TAGCTTTATACACGACATCCAGTGGAGGGCCAGAGG...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGCAAGACAATGTCCTCTaGCCCTCCACTGGATGTCGT +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLQDNVL*PSTGCR
Trigger: ACGACATCCAGTGGAGGGCCAGAGGACATTGTCTTG...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTTGTTGGGTTCAGACTaGCTCCCGTCTGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGLLGSD*LPSADC
Trigger: GCAGTCAGCAGACGGGAGCCAGTCTGAACCCAACAA...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGAGTCTGACTGTTGTTaGGTTCAGACTGGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLESDCC*VQTGSR
Trigger: ACGGGAGCCAGTCTGAACCCAACAACAGTCAGACTC...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGCCATCCTTTTCACACTaGGGTACCAGTGTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLPSFSH*GTSVGG
Trigger: GCCTCCTACACTGGTACCCCAGTGTGAAAAGGATGG...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCCGTTTGGTTCTGGGTTaGACCACTTTGGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPRLVLG*TTLDLL
Trigger: AAGAAGATCCAAAGTGGTCCAACCCAGAACCAAACG...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCGGTGGAAATGAGAAGTaGCCTTATTTCCTTCCGCAG +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLGGNEK*PYFLPQ
Trigger: CTGCGGAAGGAAATAAGGTCACTTCTCATTTCCACC...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGTCTGGCGGGATGTCATaGTTTGCCATTGCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLSGGMS*FAIAKL
Trigger: CAACTTGGCAATGGCAAATCATGACATCCCGCCAGA...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGCCACAAAGACCCCTATaGGGGAACTGGTGTCTAATG +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLPQRPL*GNWCLM
Trigger: CATTAGACACCAGTTCCCTCATAGGGGTCTTTGTGG...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCACAAAGACCCCTATaGGGGAACTGGTGTCTAATG +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPPQRPL*GNWCLM
Trigger: CATTAGACACCAGTTCCCTCATAGGGGTCTTTGTGG...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCATCACCTATGGTCACTaGCTCCAGGCATGGCATTCC +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGITYGH*LQAWHS
Trigger: GGAATGCCATGCCTGGAGTCAGTGACCATAGGTGAT...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCATGTCTAGTTGCTTTTaGGTCCTGTTTGTGCCAGTA +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPMSSCF*VLFVPV
Trigger: TACTGGCACAAACAGGACTCAAAAGCAACTAGACAT...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCATCCACTGCAGTTGTTaGACAGGGTGCTGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGIHCSC*TGCCCG
Trigger: TCCACAGCAGCACCCTGTTCAACAACTGCAGTGGAT...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR GCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCTTCGAAGCTTATGGCTaGTCCTCTGTTTTGCAACTA +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPFEAYG*SSVLQL
Trigger: TAGTTGCAAAACAGAGGAGCAGCCATAAGCTTCGAA...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTACCAGAGGGCTTTTCTaGGGAATCATCCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPTRGLF*GIIHCS
Trigger: ACTGCAGTGGATGATTCCGCAGAAAAGCCCTCTGGT...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR GCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGACCAGAGGGCTTTTCTaGGGAATCATCCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLTRGLF*GIIHCS
Trigger: ACTGCAGTGGATGATTCCGCAGAAAAGCCCTCTGGT...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR GCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTTCCCTCCCTCCCTCATaGTTCCATCCTTTTCACACT +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPSLPPS*FHPFHT
Trigger: AGTGTGAAAAGGATGGAAGCATGAGGGAGGGAGGGA...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCACTCTTCACAACAGCTaGAAGAATAGGGGCAACCCT +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLTLHNS*KNRGNP
Trigger: AGGGTTGCCCCTATTCTTCCAGCTGTTGTGAAGAGT...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCGTTCCATGTTTGAAGTaGGTTGTGAAAAGCATGGCT +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPVPCLK*VVKSMA
Trigger: AGCCATGCTTTTCACAACCCACTTCAAACATGGAAC...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGCCAGTGTTCCTCTACTaGTCTCACCCAAGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLPVFLY*SHPSQR
Trigger: TCTTTGGCTTGGGTGAGACCAGTAGAGGAACACTGG...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCAGTGTTCCTCTACTaGTCTCACCCAAGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPPVFLY*SHPSQR
Trigger: TCTTTGGCTTGGGTGAGACCAGTAGAGGAACACTGG...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCGGCATACAATAGCATaGCCCTCTGTTCTCAAGACA +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLRHTIA*PSVLKT
Trigger: TGTCTTGAGAACAGAGGGCCATGCTATTGTATGCCG...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGCCTCTGGCCCTCCACTaGATGTCGTGTATAAAGCTA +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLPLALH*MSCIKL
Trigger: TAGCTTTATACACGACATCCAGTGGAGGGCCAGAGG...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTGGCATGGCATTCCAGTaGGGATCTCATCCAAGATAC +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPGMAFQ*GSHPRY
Trigger: GTATCTTGGATGAGATCCCCACTGGAATGCCATGCC...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000367614.5
CDS-3UTR CCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCAAATATCATCACCTATaGTCACTGACTCCAGGCATG +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPKYHHL*SLTPGM
Trigger: CATGCCTGGAGTCAGTGACCATAGGTGATGATATTT...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTTGCAGTAAATAGATaGGAGGCAGCATCACCTCCT +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLLAVNR*EAASPP
Trigger: AGGAGGTGATGCTGCCTCCCATCTATTTACTGCAAG...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGCACCTAAGGCAGCAGTaGCTGTACTTCGAGGAATGT +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLHLRQQ*LYFEEC
Trigger: ACATTCCTCGAAGTACAGCCACTGCTGCCTTAGGTG...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCCCATCCTTTTCACACTaGGGTACCAGTGTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGPSFSH*GTSVGG
Trigger: GCCTCCTACACTGGTACCCCAGTGTGAAAAGGATGG...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCGTTCCTGTCGGGTGTTaGACTCCAACGCAAACTTCC +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGVPVGC*TPTQTS
Trigger: GGAAGTTTGCGTTGGAGTCCAACACCCGACAGGAAC...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS-3UTR TCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTACGGCTCTCTGCAACCTaGGGTGGAAAGGAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLRLSAT*GGKEGR
Trigger: CCTGCCTTCCTTTCCACCTCAGGTTGCAGAGAGCCG...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTTGGTGTCCTTTCCTaGACTCAACATGGAGAATGT +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLLGVLS*TQHGEC
Trigger: ACATTCTCCATGTTGAGTTCAGGAAAGGACACCAAG...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCTTGCCATTGCCAAGTTaGGCTCTGATTTGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPLPLPS*ALICLF
Trigger: AAACAAACAAATCAGAGCTCAACTTGGCAATGGCAA...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTTCTGGCGGGATGTCATaGTTTGCCATTGCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFSGGMS*FAIAKL
Trigger: CAACTTGGCAATGGCAAATCATGACATCCCGCCAGA...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGTCCATTTACAAGGCCTaGAGGCTGCCAAGAATCATC +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLSIYKA*RLPRII
Trigger: GATGATTCTTGGCAGCCTTCAGGCCTTGTAAATGGA...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTTCCATTTACAAGGCCTaGAGGCTGCCAAGAATCATC +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPSIYKA*RLPRII
Trigger: GATGATTCTTGGCAGCCTTCAGGCCTTGTAAATGGA...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR GCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCGGAGTGGTAGATGGTTaGCAACCATCAAAAGGTACT +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLGVVDG*QPSKGT
Trigger: AGTACCTTTTGATGGTTGGCAACCATCTACCACTCC...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCGAACCTGCTCTGGTCTaGTCTACAGAAATGACATCT +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLEPALV*STEMTS
Trigger: AGATGTCATTTCTGTAGAGCAGACCAGAGCAGGTTC...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCATCAACAAAGAACCTaGTCTGGTCTGCTCTACAGA +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLHQQRT*SGLLYR
Trigger: TCTGTAGAGCAGACCAGAGCAGGTTCTTTGTTGATG...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCTGGAAGTCTTTTCCATaGTCATTATTTGCTTCGGTG +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPWKSFP*SLFASV
Trigger: CACCGAAGCAAATAATGAGCATGGAAAAGACTTCCA...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGCGGGATGTCATGATTTaGCATTGCCAAGTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLRDVMI*HCQVEL
Trigger: GAGCTCAACTTGGCAATGGCAAATCATGACATCCCG...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTCCCTCCCTCCCTCATaGTTCCATCCTTTTCACACT +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGSLPPS*FHPFHT
Trigger: AGTGTGAAAAGGATGGAAGCATGAGGGAGGGAGGGA...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGCTTCTCCAACTCCTGTaGGCTCAAACCATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLLLQLL*AQTIFG
Trigger: ACCAAAGATGGTTTGAGCCCACAGGAGTTGGAGAAG...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGACTCTTCACAACAGCTaGAAGAATAGGGGCAACCCT +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLTLHNS*KNRGNP
Trigger: AGGGTTGCCCCTATTCTTCCAGCTGTTGTGAAGAGT...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTACTCTTCACAACAGCTaGAAGAATAGGGGCAACCCT +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPTLHNS*KNRGNP
Trigger: AGGGTTGCCCCTATTCTTCCAGCTGTTGTGAAGAGT...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCTACCGGAAAGCCTGTaGAGTATGACCCTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPLPESL*SMTLVS
Trigger: TGAAACAAGGGTCATACTCCACAGGCTTTCCGGTAG...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCTTCCTGAACTCAACATaGAGAATGTCACTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPFLNST*RMSLRA
Trigger: AGCTCTTAGTGACATTCTCCATGTTGAGTTCAGGAA...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCAGGGATAGCCTGAGCTaGAAGCTTTGTGTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGRDSLS*KLCVAA
Trigger: TGCTGCTACACAAAGCTTCCAGCTCAGGCTATCCCT...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCCAGTGTTCCTCTACTaGTCTCACCCAAGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFPVFLY*SHPSQR
Trigger: TCTTTGGCTTGGGTGAGACCAGTAGAGGAACACTGG...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGCGGCATACAATAGCATaGCCCTCTGTTCTCAAGACA +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLRHTIA*PSVLKT
Trigger: TGTCTTGAGAACAGAGGGCCATGCTATTGTATGCCG...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCCTCTGGCCCTCCACTaGATGTCGTGTATAAAGCTA +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFPLALH*MSCIKL
Trigger: TAGCTTTATACACGACATCCAGTGGAGGGCCAGAGG...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCCCTCTGGCCCTCCACTaGATGTCGTGTATAAAGCTA +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGPLALH*MSCIKL
Trigger: TAGCTTTATACACGACATCCAGTGGAGGGCCAGAGG...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGCTTGCAGTAAATAGATaGGAGGCAGCATCACCTCCT +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLLAVNR*EAASPP
Trigger: AGGAGGTGATGCTGCCTCCCATCTATTTACTGCAAG...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCTTGCAGTAAATAGATaGGAGGCAGCATCACCTCCT +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPLAVNR*EAASPP
Trigger: AGGAGGTGATGCTGCCTCCCATCTATTTACTGCAAG...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCAGCACCCAGTACTTCTaGCTTATGAACTTCTACTTT +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPSTQYF*LMNFYF
Trigger: AAAGTAGAAGTTCATAAGCCAGAAGTACTGGGTGCT...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCCACCTAAGGCAGCAGTaGCTGTACTTCGAGGAATGT +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGHLRQQ*LYFEEC
Trigger: ACATTCCTCGAAGTACAGCCACTGCTGCCTTAGGTG...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGCAAAGCCTAAGCGGCTaGATTCTGTTTTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLQSLSG*ILFFSL
Trigger: GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTG...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCAATAACTCCTCATTTTaGCCTGGGAGTTCATCAAAG +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPNNSSF*PGSSSK
Trigger: CTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATT...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGCAGATCGTTTGGTTCTaGGTTGGACCACTTTGGATC +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLQIVWF*VGPLWI
Trigger: GATCCAAAGTGGTCCAACCCAGAACCAAACGATCTG...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCAGATCGTTTGGTTCTaGGTTGGACCACTTTGGATC +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPQIVWF*VGPLWI
Trigger: GATCCAAAGTGGTCCAACCCAGAACCAAACGATCTG...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCAGGGAGGACTTCTaGACAATTCCAATATTTCCA +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLLREDF*TIPIFP
Trigger: TGGAAATATTGGAATTGTTCAGAAGTCCTCCCTGAG...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCATAGACATCTTCGTTTaGGGATGTGTCACACAAAAA +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPIDIFV*GCVTQK
Trigger: TTTTTGTGTGACACATCCTCAAACGAAGATGTCTAT...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTCCATTTACAAGGCCTaGAGGCTGCCAAGAATCATC +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGSIYKA*RLPRII
Trigger: GATGATTCTTGGCAGCCTTCAGGCCTTGTAAATGGA...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR GCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGGAGTGGTAGATGGTTaGCAACCATCAAAAGGTACT +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLGVVDG*QPSKGT
Trigger: AGTACCTTTTGATGGTTGGCAACCATCTACCACTCC...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTGAACCTGCTCTGGTCTaGTCTACAGAAATGACATCT +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPEPALV*STEMTS
Trigger: AGATGTCATTTCTGTAGAGCAGACCAGAGCAGGTTC...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCGGTAAAAATTTTACCTaGTGGACATCCTCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLGKNFT*WTSSRL
Trigger: AAGCCGAGAGGATGTCCAGCAGGTAAAATTTTTACC...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCGGGATGTCATGATTTaGCATTGCCAAGTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFRDVMI*HCQVEL
Trigger: GAGCTCAACTTGGCAATGGCAAATCATGACATCCCG...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTACTCTGACGAATCCCTaGTATAGATCCGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPTLTNP*YRSGCR
Trigger: TCTACATCCGGATCTATAGCAGGGATTCGTCAGAGT...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGACTCTGACGAATCCCTaGTATAGATCCGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLTLTNP*YRSGCR
Trigger: TCTACATCCGGATCTATAGCAGGGATTCGTCAGAGT...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCTTGTTCAGACATTGTaGCCTACAGGACTGAAGACA +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPLVQTL*PTGLKT
Trigger: TGTCTTCAGTCCTGTAGGGCACAATGTCTGAACAAG...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS-3UTR CCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTTCTCCAACTCCTGTaGGCTCAAACCATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFLLQLL*AQTIFG
Trigger: ACCAAAGATGGTTTGAGCCCACAGGAGTTGGAGAAG...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTATTCGGAGTGGTAGATaGTTGCCAACCATCAAAAGG +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPIRSGR*LPTIKR
Trigger: CCTTTTGATGGTTGGCAACCATCTACCACTCCGAAT...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGAGTTTCGAAGCTTATaGCTGCTCCTCTGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLEFRSL*LLLCFA
Trigger: TGCAAAACAGAGGAGCAGCCATAAGCTTCGAAACTC...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTGAGTTTCGAAGCTTATaGCTGCTCCTCTGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPEFRSL*LLLCFA
Trigger: TGCAAAACAGAGGAGCAGCCATAAGCTTCGAAACTC...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTACCGGAAAGCCTGTaGAGTATGACCCTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFLPESL*SMTLVS
Trigger: TGAAACAAGGGTCATACTCCACAGGCTTTCCGGTAG...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCCTACCGGAAAGCCTGTaGAGTATGACCCTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGLPESL*SMTLVS
Trigger: TGAAACAAGGGTCATACTCCACAGGCTTTCCGGTAG...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTTTCTCAAGGACTCGATaGATAATGACCCGATACCAC +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPFSRTR*IMTRYH
Trigger: GTGGTATCGGGTCATTATCCATCGAGTCCTTGAGAA...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCAAATATCATCACCTATaGTCACTGACTCCAGGCATG +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLKYHHL*SLTPGM
Trigger: CATGCCTGGAGTCAGTGACCATAGGTGATGATATTT...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTTGCAGTAAATAGATaGGAGGCAGCATCACCTCCT +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFLAVNR*EAASPP
Trigger: AGGAGGTGATGCTGCCTCCCATCTATTTACTGCAAG...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCGCTGACTGCTCTGACTaGGTAAGAGAGGTACAGAAT +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGADCSD*VREVQN
Trigger: ATTCTGTACCTCTCTTACCCAGTCAGAGCAGTCAGC...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTATGCGGAGGCGTTAACTaGGGTTCCTGTCGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLCGGVN*GSCRVL
Trigger: CAACACCCGACAGGAACCCCAGTTAACGCCTCCGCA...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS-3UTR CCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGCGTTTGGTTCTGGGTTaGACCACTTTGGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLRLVLG*TTLDLL
Trigger: AAGAAGATCCAAAGTGGTCCAACCCAGAACCAAACG...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTTTCCTTCAGATCGTTTaGTTCTGGGTTGGACCACTT +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPFLQIV*FWVGPL
Trigger: AAGTGGTCCAACCCAGAACCAAACGATCTGAAGGAA...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTTCTTCCCTTATGCATTaGGTTTCGAAGCTTATGGCT +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPSSLMH*VSKLMA
Trigger: AGCCATAAGCTTCGAAACTCAATGCATAAGGGAAGA...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGTACAGAAATGACATCTaGAGCCGCATTAAGCACTTC +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLYRNDI*SRIKHF
Trigger: GAAGTGCTTAATGCGGCTTCAGATGTCATTTCTGTA...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTTGGTGTCCTTTCCTaGACTCAACATGGAGAATGT +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFLGVLS*TQHGEC
Trigger: ACATTCTCCATGTTGAGTTCAGGAAAGGACACCAAG...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTAGCAGCAGTAGACAATaGATTTCTAGGTGGACTGGA +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFSSSRQ*ISRWTG
Trigger: TCCAGTCCACCTAGAAATTCATTGTCTACTGCTGCT...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCTGCCAAGTTGAGCTCTaGTTTGTTTGTTTCTACTTG +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLCQVEL*FVCFYL
Trigger: CAAGTAGAAACAAACAAATCAGAGCTCAACTTGGCA...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCTCAGGGAGGACTTCTaGACAATTCCAATATTTCCA +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPLREDF*TIPIFP
Trigger: TGGAAATATTGGAATTGTTCAGAAGTCCTCCCTGAG...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGCTCAGGGAGGACTTCTaGACAATTCCAATATTTCCA +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLLREDF*TIPIFP
Trigger: TGGAAATATTGGAATTGTTCAGAAGTCCTCCCTGAG...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGATGTCTAGTTGCTTTTaGGTCCTGTTTGTGCCAGTA +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLMSSCF*VLFVPV
Trigger: TACTGGCACAAACAGGACTCAAAAGCAACTAGACAT...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTATGTCTAGTTGCTTTTaGGTCCTGTTTGTGCCAGTA +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPMSSCF*VLFVPV
Trigger: TACTGGCACAAACAGGACTCAAAAGCAACTAGACAT...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCTGGTCTACAGATTCTTaGCGCTTGTCTTTGTACAAT +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLWSTDS*RLSLYN
Trigger: ATTGTACAAAGACAAGCGTCAAGAATCTGTAGACCA...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCTGGGATACAAATAACTaGGACTCCAGTTTTAAGGGT +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLWDTNN*DSSFKG
Trigger: ACCCTTAAAACTGGAGTCTCAGTTATTTGTATCCCA...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS-3UTR TCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGACAGAAACGCAGCTaGGGAAAAGGGGGCAAACCC +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLRQKRS*GKGGKP
Trigger: GGGTTTGCCCCCTTTTCCTCAGCTGCGTTTCTGTCT...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS-3UTR GCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCGGAGTGGTAGATGGTTaGCAACCATCAAAAGGTACT +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGGVVDG*QPSKGT
Trigger: AGTACCTTTTGATGGTTGGCAACCATCTACCACTCC...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCGAACCTGCTCTGGTCTaGTCTACAGAAATGACATCT +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGEPALV*STEMTS
Trigger: AGATGTCATTTCTGTAGAGCAGACCAGAGCAGGTTC...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAGTTCGGCACAGCGTCTaGCGGGATGTCATGATTTGC +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLVRHSV*RDVMIC
Trigger: GCAAATCATGACATCCCGCCAGACGCTGTGCCGAAC...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCCTGAATAAAACATTCTaGCATGACATATCGATCAGA +
Preference number: 4 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPLNKTF*HDISIR
Trigger: TCTGATCGATATGTCATGCCAGAATGTTTTATTCAG...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTTTCTCAAGGACTCGATaGATAATGACCCGATACCAC +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFFSRTR*IMTRYH
Trigger: GTGGTATCGGGTCATTATCCATCGAGTCCTTGAGAA...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCAAACCGCACAACTTCTaGAACTGCAAAATAGCTTTC +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLKPHNF*NCKIAF
Trigger: GAAAGCTATTTTGCAGTTCCAGAAGTTGTGCGGTTT...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCAGCACCCAGTACTTCTaGCTTATGAACTTCTACTTT +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLSTQYF*LMNFYF
Trigger: AAAGTAGAAGTTCATAAGCCAGAAGTACTGGGTGCT...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTATTGTTGGGTTCAGACTaGCTCCCGTCTGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLLLGSD*LPSADC
Trigger: GCAGTCAGCAGACGGGAGCCAGTCTGAACCCAACAA...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCAAGCTGAATTTGCTTTaGCTGAGTCTGACTGTTGTT +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLKLNLL*LSLTVV
Trigger: AACAACAGTCAGACTCAGCCAAAGCAAATTCAGCTT...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCAATAACTCCTCATTTTaGCCTGGGAGTTCATCAAAG +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLNNSSF*PGSSSK
Trigger: CTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATT...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTTTCCTTCAGATCGTTTaGTTCTGGGTTGGACCACTT +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFFLQIV*FWVGPL
Trigger: AAGTGGTCCAACCCAGAACCAAACGATCTGAAGGAA...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGTTGCATGTATTGGAATaGTCGTCCAAATCTTTTGGC +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLLHVLE*SSKSFG
Trigger: GCCAAAAGATTTGGACGATCATTCCAATACATGCAA...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTTTGCATGTATTGGAATaGTCGTCCAAATCTTTTGGC +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPLHVLE*SSKSFG
Trigger: GCCAAAAGATTTGGACGATCATTCCAATACATGCAA...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGAAAGCCTGTGGAGTATaGCCCTTGTTTCATTCTAAA +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLKACGV*PLFHSK
Trigger: TTTAGAATGAAACAAGGGTCATACTCCACAGGCTTT...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGTGCCAAGTTGAGCTCTaGTTTGTTTGTTTCTACTTG +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLCQVEL*FVCFYL
Trigger: CAAGTAGAAACAAACAAATCAGAGCTCAACTTGGCA...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTTTGCCATTGCCAAGTTaGGCTCTGATTTGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPLPLPS*ALICLF
Trigger: AAACAAACAAATCAGAGCTCAACTTGGCAATGGCAA...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTATGTCTAGTTGCTTTTaGGTCCTGTTTGTGCCAGTA +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFMSSCF*VLFVPV
Trigger: TACTGGCACAAACAGGACTCAAAAGCAACTAGACAT...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR GCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTGGTAAAAATTTTACCTaGTGGACATCCTCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFGKNFT*WTSSRL
Trigger: AAGCCGAGAGGATGTCCAGCAGGTAAAATTTTTACC...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGTCCATGCTCATTATTTaGTTCGGTGGTTCCATGTTT +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLSMLII*FGGSMF
Trigger: AAACATGGAACCACCGAAGCAAATAATGAGCATGGA...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTTGGAAGTCTTTTCCATaGTCATTATTTGCTTCGGTG +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPWKSFP*SLFASV
Trigger: CACCGAAGCAAATAATGAGCATGGAAAAGACTTCCA...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCGTTCCATGTTTGAAGTaGGTTGTGAAAAGCATGGCT +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGVPCLK*VVKSMA
Trigger: AGCCATGCTTTTCACAACCCACTTCAAACATGGAAC...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTTTCCTGAACTCAACATaGAGAATGTCACTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPFLNST*RMSLRA
Trigger: AGCTCTTAGTGACATTCTCCATGTTGAGTTCAGGAA...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGAACACTAGTAAGTCTTaGTGTCCTTTCCTGAACTCA +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLNTSKS*CPFLNS
Trigger: TGAGTTCAGGAAAGGACACCAAGACTTACTAGTGTT...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGAAACCGCACAACTTCTaGAACTGCAAAATAGCTTTC +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLKPHNF*NCKIAF
Trigger: GAAAGCTATTTTGCAGTTCCAGAAGTTGTGCGGTTT...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGAAGCTGAATTTGCTTTaGCTGAGTCTGACTGTTGTT +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLKLNLL*LSLTVV
Trigger: AACAACAGTCAGACTCAGCCAAAGCAAATTCAGCTT...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTACCATCCTTTTCACACTaGGGTACCAGTGTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLPSFSH*GTSVGG
Trigger: GCCTCCTACACTGGTACCCCAGTGTGAAAAGGATGG...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTAATAACTCCTCATTTTaGCCTGGGAGTTCATCAAAG +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPNNSSF*PGSSSK
Trigger: CTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATT...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTATCTGGCGGGATGTCATaGTTTGCCATTGCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLSGGMS*FAIAKL
Trigger: CAACTTGGCAATGGCAAATCATGACATCCCGCCAGA...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGATAGACATCTTCGTTTaGGGATGTGTCACACAAAAA +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLIDIFV*GCVTQK
Trigger: TTTTTGTGTGACACATCCTCAAACGAAGATGTCTAT...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTTTACATGATGAATACTaGTTCTTTCCACCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPLHDEY*FFPPRL
Trigger: AAGCCTTGGTGGAAAGAATCAGTATTCATCATGTAA...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTTGGTCTACAGATTCTTaGCGCTTGTCTTTGTACAAT +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFWSTDS*RLSLYN
Trigger: ATTGTACAAAGACAAGCGTCAAGAATCTGTAGACCA...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGTCTACAGATTCTTaGCGCTTGTCTTTGTACAAT +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGWSTDS*RLSLYN
Trigger: ATTGTACAAAGACAAGCGTCAAGAATCTGTAGACCA...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR GCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTAGGTCTTCCCTTATaGATTGAGTTTCGAAGCTTA +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFLGLPL*IEFRSL
Trigger: TAAGCTTCGAAACTCAATGCATAAGGGAAGACCTAG...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCCTAGGTCTTCCCTTATaGATTGAGTTTCGAAGCTTA +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGLGLPL*IEFRSL
Trigger: TAAGCTTCGAAACTCAATGCATAAGGGAAGACCTAG...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCGAGAGAAATCCATATTaGATGTATTGGAATGATCGT +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLERNPY*MYWNDR
Trigger: ACGATCATTCCAATACATGCAATATGGATTTCTCTC...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTCCATGCTCATTATTTaGTTCGGTGGTTCCATGTTT +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGSMLII*FGGSMF
Trigger: AAACATGGAACCACCGAAGCAAATAATGAGCATGGA...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTTGGAAGTCTTTTCCATaGTCATTATTTGCTTCGGTG +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFWKSFP*SLFASV
Trigger: CACCGAAGCAAATAATGAGCATGGAAAAGACTTCCA...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTTTGTTTGTTTCTACTTaGAGCTGTAAAGGCTTTACC +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPLFVST*SCKGFT
Trigger: GGTAAAGCCTTTACAGCTGCAAGTAGAAACAAACAA...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGTTGTTTGTTTCTACTTaGAGCTGTAAAGGCTTTACC +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLLFVST*SCKGFT
Trigger: GGTAAAGCCTTTACAGCTGCAAGTAGAAACAAACAA...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAACCAGAGGGCTTTTCTaGGGAATCATCCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLTRGLF*GIIHCS
Trigger: ACTGCAGTGGATGATTCCGCAGAAAAGCCCTCTGGT...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCTTTGGTAGATTCATCTaGAATGGCTTTCAGTATTAC +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLFGRFI*NGFQYY
Trigger: GTAATACTGAAAGCCATTCCAGATGAATCTACCAAA...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCAATATTTCCAAAGTCTaGGTAGAACACTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLNISKV*VEHFNF
Trigger: GAAGTTGAAGTGTTCTACCCAGACTTTGGAAATATT...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTAAACCGCACAACTTCTaGAACTGCAAAATAGCTTTC +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFKPHNF*NCKIAF
Trigger: GAAAGCTATTTTGCAGTTCCAGAAGTTGTGCGGTTT...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCAGCACCCAGTACTTCTaGCTTATGAACTTCTACTTT +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGSTQYF*LMNFYF
Trigger: AAAGTAGAAGTTCATAAGCCAGAAGTACTGGGTGCT...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTAAGCTGAATTTGCTTTaGCTGAGTCTGACTGTTGTT +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFKLNLL*LSLTVV
Trigger: AACAACAGTCAGACTCAGCCAAAGCAAATTCAGCTT...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTACACCTAAGGCAGCAGTaGCTGTACTTCGAGGAATGT +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLHLRQQ*LYFEEC
Trigger: ACATTCCTCGAAGTACAGCCACTGCTGCCTTAGGTG...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTATAGACATCTTCGTTTaGGGATGTGTCACACAAAAA +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFIDIFV*GCVTQK
Trigger: TTTTTGTGTGACACATCCTCAAACGAAGATGTCTAT...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCATAGACATCTTCGTTTaGGGATGTGTCACACAAAAA +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGIDIFV*GCVTQK
Trigger: TTTTTGTGTGACACATCCTCAAACGAAGATGTCTAT...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTTTACATGATGAATACTaGTTCTTTCCACCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFLHDEY*FFPPRL
Trigger: AAGCCTTGGTGGAAAGAATCAGTATTCATCATGTAA...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR GCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTTTGTTTGTTTCTACTTaGAGCTGTAAAGGCTTTACC +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFLFVST*SCKGFT
Trigger: GGTAAAGCCTTTACAGCTGCAAGTAGAAACAAACAA...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTTTTGGTAGATTCATCTaGAATGGCTTTCAGTATTAC +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPFGRFI*NGFQYY
Trigger: GTAATACTGAAAGCCATTCCAGATGAATCTACCAAA...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGTTTGGTAGATTCATCTaGAATGGCTTTCAGTATTAC +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLFGRFI*NGFQYY
Trigger: GTAATACTGAAAGCCATTCCAGATGAATCTACCAAA...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCATATTGCATGTATTaGAATGATCGTCCAAATCTT +
Preference number: 4 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPPYCMY*NDRPNL
Trigger: AAGATTTGGACGATCATTCCAATACATGCAATATGG...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGAATATTTCCAAAGTCTaGGTAGAACACTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLNISKV*VEHFNF
Trigger: GAAGTTGAAGTGTTCTACCCAGACTTTGGAAATATT...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAGCTGACTGCTCTGACTaGGTAAGAGAGGTACAGAAT +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLADCSD*VREVQN
Trigger: ATTCTGTACCTCTCTTACCCAGTCAGAGCAGTCAGC...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTACAAAGCCTAAGCGGCTaGATTCTGTTTTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLQSLSG*ILFFSL
Trigger: GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTG...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAATCTCCACCTGCGTTaGTTAAGCTACAGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLNLHLR*LSYRCQ
Trigger: TTGACACCTGTAGCTTAATCAACGCAGGTGGAGATT...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS-3UTR GCA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCGAGAGAAATCCATATTaGATGTATTGGAATGATCGT +
Preference number: 4 (lower is better)
Translates to: FASITPHFGLGVHQSLSGERNPY*MYWNDR
Trigger: ACGATCATTCCAATACATGCAATATGGATTTCTCTC...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTGAGAGAAATCCATATTaGATGTATTGGAATGATCGT +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFERNPY*MYWNDR
Trigger: ACGATCATTCCAATACATGCAATATGGATTTCTCTC...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTACATCAACAAAGAACCTaGTCTGGTCTGCTCTACAGA +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLHQQRT*SGLLYR
Trigger: TCTGTAGAGCAGACCAGAGCAGGTTCTTTGTTGATG...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAGAGTTTCGAAGCTTATaGCTGCTCCTCTGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLEFRSL*LLLCFA
Trigger: TGCAAAACAGAGGAGCAGCCATAAGCTTCGAAACTC...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCCATATTGCATGTATTaGAATGATCGTCCAAATCTT +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFPYCMY*NDRPNL
Trigger: AAGATTTGGACGATCATTCCAATACATGCAATATGG...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTGAATAAAACATTCTaGCATGACATATCGATCAGA +
Preference number: 4 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFLNKTF*HDISIR
Trigger: TCTGATCGATATGTCATGCCAGAATGTTTTATTCAG...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTATTCTCAAGGACTCGATaGATAATGACCCGATACCAC +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLFSRTR*IMTRYH
Trigger: GTGGTATCGGGTCATTATCCATCGAGTCCTTGAGAA...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTATCTTCCCTTATGCATTaGGTTTCGAAGCTTATGGCT +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLSSLMH*VSKLMA
Trigger: AGCCATAAGCTTCGAAACTCAATGCATAAGGGAAGA...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTATACAGAAATGACATCTaGAGCCGCATTAAGCACTTC +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLYRNDI*SRIKHF
Trigger: GAAGTGCTTAATGCGGCTTCAGATGTCATTTCTGTA...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR GCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTATTCGAAGCTTATGGCTaGTCCTCTGTTTTGCAACTA +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLFEAYG*SSVLQL
Trigger: TAGTTGCAAAACAGAGGAGCAGCCATAAGCTTCGAA...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAAATATCATCACCTATaGTCACTGACTCCAGGCATG +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLKYHHL*SLTPGM
Trigger: CATGCCTGGAGTCAGTGACCATAGGTGATGATATTT...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR TCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAAAGCCTGTGGAGTATaGCCCTTGTTTCATTCTAAA +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLKACGV*PLFHSK
Trigger: TTTAGAATGAAACAAGGGTCATACTCCACAGGCTTT...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTATGCCAAGTTGAGCTCTaGTTTGTTTGTTTCTACTTG +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLCQVEL*FVCFYL
Trigger: CAAGTAGAAACAAACAAATCAGAGCTCAACTTGGCA...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTATGGTCTACAGATTCTTaGCGCTTGTCTTTGTACAAT +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLWSTDS*RLSLYN
Trigger: ATTGTACAAAGACAAGCGTCAAGAATCTGTAGACCA...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR GCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTACTAGGTCTTCCCTTATaGATTGAGTTTCGAAGCTTA +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLLGLPL*IEFRSL
Trigger: TAAGCTTCGAAACTCAATGCATAAGGGAAGACCTAG...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTATTCCTGAACTCAACATaGAGAATGTCACTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLFLNST*RMSLRA
Trigger: AGCTCTTAGTGACATTCTCCATGTTGAGTTCAGGAA...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAACACTAGTAAGTCTTaGTGTCCTTTCCTGAACTCA +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLNTSKS*CPFLNS
Trigger: TGAGTTCAGGAAAGGACACCAAGACTTACTAGTGTT...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR TCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTATTACATGATGAATACTaGTTCTTTCCACCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLLHDEY*FFPPRL
Trigger: AAGCCTTGGTGGAAAGAATCAGTATTCATCATGTAA...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CCA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAATATTTCCAAAGTCTaGGTAGAACACTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: YYFASITPHFGLGVHQSLNISKV*VEHFNF
Trigger: GAAGTTGAAGTGTTCTACCCAGACTTTGGAAATATT...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS GCA 90 bp GCGCCCTTCTCGGCCCGGCACCGCCCTGCTGCCAGTCACCCGTCTTaGCCCCACCGCGCCCTGACGCCAGCGCTGCTGGTGCGGGCCGAG +
Preference number: 5 (lower is better)
Translates to: APFSARHRPAASHPS*PHRALTPALLVRAE
Trigger: CTCGGCCCGCACCAGCAGCGCTGGCGTCAGGGCGCGGTGGGGGCAAGACGGGTGACTGGCAGCAGGGCGGTGCCGGGCCGAGAAGGGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS GCA 90 bp CGTCTCTCGGTGACCCTCACGGGAGCGGGGCGTGGCCCTTCCACCTaGCCTGGCGGCTCTCTGCAACCTGAGGTGGAAAGGAAGGCAGGA +
Preference number: 5 (lower is better)
Translates to: RLSVTLTGAGRGPST*PGGSLQPEVERKAG
Trigger: TCCTGCCTTCCTTTCCACCTCAGGTTGCAGAGAGCCGCCAGGGCAGGTGGAAGGGCCACGCCCCGCTCCCGTGAGGGTCACCGAGAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS CCA 90 bp GCCCCTGGCCATGCGGAGGCGTTAACTGGGGTTCCTGTCGGGTGTTaGACTCCAACGCAAACTTCCCATCCGAAGCCTTCCAGGATCCCA +
Preference number: 5 (lower is better)
Translates to: APGHAEALTGVPVGC*TPTQTSHPKPSRIP
Trigger: TGGGATCCTGGAAGGCTTCGGATGGGAAGTTTGCGTTGGAGTCCAACACCCGACAGGAACCCCAGTTAACGCCTCCGCATGGCCAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS TCA 90 bp CTTGCGCGTGGCCGGGCGATTCAAGCCCTGAATCTCCACCTGCGTTaGTTAAGCTACAGGTGTCAAGAACTCTGCCCCTGGCCATGCGGA +
Preference number: 5 (lower is better)
Translates to: LARGRAIQALNLHLR*LSYRCQELCPWPCG
Trigger: TCCGCATGGCCAGGGGCAGAGTTCTTGACACCTGTAGCTTAATCAACGCAGGTGGAGATTCAGGGCTTGAATCGCCCGGCCACGCGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS-3UTR CAA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGAGGGTGCCCTGCGGCTaGCGCGTGGCCGGGCGATTC +
Preference number: 5 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLRVPCG*RVAGRF
Trigger: GAATCGCCCGGCCACGCGCAAGCCGCAGGGCACCCT...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS CCA 90 bp TACAGGTGTCAAGAACTCTGCCCCTGGCCATGCGGAGGCGTTAACTaGGGTTCCTGTCGGGTGTTGGACTCCAACGCAAACTTCCCATCC +
Preference number: 5 (lower is better)
Translates to: YRCQELCPWPCGGVN*GSCRVLDSNANFPS
Trigger: GGATGGGAAGTTTGCGTTGGAGTCCAACACCCGACAGGAACCCCAGTTAACGCCTCCGCATGGCCAGGGGCAGAGTTCTTGACACCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS-3UTR CAA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTTGCCAGTCACCCGTCTaGCCCCCACCGCGCCCTGAC +
Preference number: 5 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPCQSPV*PPPRPD
Trigger: GTCAGGGCGCGGTGGGGGCAAGACGGGTGACTGGCA...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS-3UTR CAA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTTGCCAGTCACCCGTCTaGCCCCCACCGCGCCCTGAC +
Preference number: 5 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFCQSPV*PPPRPD
Trigger: GTCAGGGCGCGGTGGGGGCAAGACGGGTGACTGGCA...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCAGGACTGGTCTAGGGTaGGGGTCCCTGCCCCACCCC +
Preference number: 5 (lower is better)
Translates to: FASITPHFGLGVHQSLSGRTGLG*GSLPHP
Trigger: GGGGTGGGGCAGGGACCCCAACCCTAGACCAGTCCT...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS-3UTR CAA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCGTGAAAAGCATGGCTTaGCTACCGGAAAGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPVKSMA*LPESLW
Trigger: CCACAGGCTTTCCGGTAGCAAAGCCATGCTTTTCAC...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS CCA 90 bp ACCAGCTCCATAGTGGACCGATACCCAAGGATTCGGAGTGGTAGATaGTTGCCAACCATCAAAAGGTACTCCTTCTCCAACTCCTGTGGG +
Preference number: 5 (lower is better)
Translates to: TSSIVDRYPRIRSGR*LPTIKRYSFSNSCG
Trigger: CCCACAGGAGTTGGAGAAGGAGTACCTTTTGATGGTTGGCAACCATCTACCACTCCGAATCCTTGGGTATCGGTCCACTATGGAGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCGCTCTTGTTCAGACATaGTGCCCTACAGGACTGAAG +
Preference number: 5 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPALVQT*CPTGLK
Trigger: CTTCAGTCCTGTAGGGCACAATGTCTGAACAAGAGC...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS CCA 90 bp CTGTTGTTGGGTTCAGACTGGCTCCCGTCTGCTGACTGCTCTGACTaGGTAAGAGAGGTACAGAATTCTTCCAATTTGGGCAGTGTGGAA +
Preference number: 5 (lower is better)
Translates to: LLLGSDWLPSADCSD*VREVQNSSNLGSVE
Trigger: TTCCACACTGCCCAAATTGGAAGAATTCTGTACCTCTCTTACCCAGTCAGAGCAGTCAGCAGACGGGAGCCAGTCTGAACCCAACAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS CCA 90 bp ATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTaGATTCTGTTTTTCTCCCTCCTCCCTCCCTCCCTCATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: ITPHFGLGVHQSLSG*ILFFSLLPPSLMLP
Trigger: TGGAAGCATGAGGGAGGGAGGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCATCCACTGCAGTTGTaGAACAGGGTGCTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPHPLQL*NRVLLW
Trigger: CCACAGCAGCACCCTGTTCAACAACTGCAGTGGATG...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGGTTCCTGTCGGGTGTaGGACTCCAACGCAAACTTC +
Preference number: 5 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLGSCRV*DSNANF
Trigger: GAAGTTTGCGTTGGAGTCCAACACCCGACAGGAACC...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS-3UTR CAA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCTCGTTTGGTTCTGGGTaGGACCACTTTGGATCTTCT +
Preference number: 5 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPSFGSG*DHFGSS
Trigger: AGAAGATCCAAAGTGGTCCAACCCAGAACCAAACGA...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417329.1
ENST00000444136.6
CDS TCA 90 bp CACAGAACCAGAGGGCTTTTCTGCGGAATCATCCACTGCAGTTGTTaGACAGGGTGCTGCTGTGGAAAGCTGAATTTGCTTTGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: HRTRGLFCGIIHCSC*TGCCCGKLNLLWLS
Trigger: ACTCAGCCAAAGCAAATTCAGCTTTCCACAGCAGCACCCTGTTCAACAACTGCAGTGGATGATTCCGCAGAAAAGCCCTCTGGTTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTGCTCTTGTTCAGACATaGTGCCCTACAGGACTGGTC +
Preference number: 5 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPALVQT*CPTGLV
Trigger: GACCAGTCCTGTAGGGCACAATGTCTGAACAAGAGC...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS-3UTR CAA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGCTCTTGTTCAGACATaGTGCCCTACAGGACTGGTC +
Preference number: 5 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLALVQT*CPTGLV
Trigger: GACCAGTCCTGTAGGGCACAATGTCTGAACAAGAGC...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCGGAGTGGTAGATGGTaGCCAACCATCAAAAGGTAC +
Preference number: 5 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLRSGRW*PTIKRY
Trigger: GTACCTTTTGATGGTTGGCAACCATCTACCACTCCG...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGTGAAAAGCATGGCTTaGCTACCGGAAAGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLVKSMA*LPESLW
Trigger: CCACAGGCTTTCCGGTAGCAAAGCCATGCTTTTCAC...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCAGTCTGCATAATTTCTaGTTCGGCACAGCGTCTGGC +
Preference number: 5 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLSLHNF*FGTASG
Trigger: GCCAGACGCTGTGCCGAACAAGAAATTATGCAGACT...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCATCCACTGCAGTTGTaGAACAGGGTGCTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFHPLQL*NRVLLW
Trigger: CCACAGCAGCACCCTGTTCAACAACTGCAGTGGATG...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCCATCCACTGCAGTTGTaGAACAGGGTGCTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: FASITPHFGLGVHQSLSGHPLQL*NRVLLW
Trigger: CCACAGCAGCACCCTGTTCAACAACTGCAGTGGATG...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTTCCTTCAGATCGTTaGGTTCTGGGTTGGACCACT +
Preference number: 5 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLLPSDR*VLGWTT
Trigger: AGTGGTCCAACCCAGAACCAAACGATCTGAAGGAAG...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417329.1
ENST00000444136.6
CDS GCA 90 bp TCCACTACCCCCACTAATGGCTTCAAACCGCACAACTTCTGGAACTaGAAAATAGCTTTCGATGTCCAGTGTTCCTCTACTGGTCTCACC +
Preference number: 5 (lower is better)
Translates to: STTPTNGFKPHNFWN*KIAFDVQCSSTGLT
Trigger: GGTGAGACCAGTAGAGGAACACTGGACATCGAAAGCTATTTTGCAGTTCCAGAAGTTGTGCGGTTTGAAGCCATTAGTGGGGGTAGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCGGAGTGGTAGATGGTaGCCAACCATCAAAAGGTAC +
Preference number: 5 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPRSGRW*PTIKRY
Trigger: GTACCTTTTGATGGTTGGCAACCATCTACCACTCCG...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCGTGAAAAGCATGGCTTaGCTACCGGAAAGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: FASITPHFGLGVHQSLSGVKSMA*LPESLW
Trigger: CCACAGGCTTTCCGGTAGCAAAGCCATGCTTTTCAC...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCTTCCATGCTCATTATTaGCTTCGGTGGTTCCATGTT +
Preference number: 5 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPFHAHY*LRWFHV
Trigger: AACATGGAACCACCGAAGCAAATAATGAGCATGGAA...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCTGTGCAATAACTGATTaGAATGTGTTCTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPCAITD*NVFSSW
Trigger: CCAGCTGGAGAACACATTCAAATCAGTTATTGCACA...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGAGTCTGCATAATTTCTaGTTCGGCACAGCGTCTGGC +
Preference number: 5 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLSLHNF*FGTASG
Trigger: GCCAGACGCTGTGCCGAACAAGAAATTATGCAGACT...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGAATCATCCACTGCAGTaGTTGAACAGGGTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLNHPLQ*LNRVLL
Trigger: CAGCAGCACCCTGTTCAACAACTGCAGTGGATGATT...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTAATCATCCACTGCAGTaGTTGAACAGGGTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPNHPLQ*LNRVLL
Trigger: CAGCAGCACCCTGTTCAACAACTGCAGTGGATGATT...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCCTGGTCTACAGATTCTaGACGCTTGTCTTTGTACAA +
Preference number: 5 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPLVYRF*TLVFVQ
Trigger: TTGTACAAAGACAAGCGTCAAGAATCTGTAGACCAG...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGGGCTCAAACCATCTTaGGTGGAAATGAGAAGTGAC +
Preference number: 5 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLGLKPS*VEMRSD
Trigger: GTCACTTCTCATTTCCACCAAAGATGGTTTGAGCCC...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTGGGCTCAAACCATCTTaGGTGGAAATGAGAAGTGAC +
Preference number: 5 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPGLKPS*VEMRSD
Trigger: GTCACTTCTCATTTCCACCAAAGATGGTTTGAGCCC...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCGGAGTGGTAGATGGTaGCCAACCATCAAAAGGTAC +
Preference number: 5 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFRSGRW*PTIKRY
Trigger: GTACCTTTTGATGGTTGGCAACCATCTACCACTCCG...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGTCGGTGGTTCCATGTTaGAAGTGGGTTGTGAAAAGC +
Preference number: 5 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLSVVPC*KWVVKS
Trigger: GCTTTTCACAACCCACTTCAAACATGGAACCACCGA...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTTCGGTGGTTCCATGTTaGAAGTGGGTTGTGAAAAGC +
Preference number: 5 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPSVVPC*KWVVKS
Trigger: GCTTTTCACAACCCACTTCAAACATGGAACCACCGA...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCCAGTGTGATTCAGTCTaGAAGTCTCCACTACATTTA +
Preference number: 5 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPQCDSV*KSPLHL
Trigger: TAAATGTAGTGGAGACTTCAAGACTGAATCACACTG...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCAGTCTGCATAATTTCTaGTTCGGCACAGCGTCTGGC +
Preference number: 5 (lower is better)
Translates to: FASITPHFGLGVHQSLSGSLHNF*FGTASG
Trigger: GCCAGACGCTGTGCCGAACAAGAAATTATGCAGACT...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCGATCCGGATGTAGAATaGACTAGGAGAGATGATATA +
Preference number: 5 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPDPDVE*TRRDDI
Trigger: TATATCATCTCTCCTAGTCAATTCTACATCCGGATC...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCTATAAAGCTAAAGGGTaGAGCTCACTGAAACCCTTA +
Preference number: 5 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPYKAKG*SSLKPL
Trigger: TAAGGGTTTCAGTGAGCTCAACCCTTTAGCTTTATA...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp CCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTCCCGTAACTCACTCTCTTTaGACTGTGGACTTATCTTTC +
Preference number: 5 (lower is better)
Translates to: PGSSSKPKRLDSVFLPPPVTHSL*TVDLSF
Trigger: GAAAGATAAGTCCACAGTCAAAAGAGAGTGAGTTAC...GGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCTGTGGAAAGCTGAATTaGCTTTGGCTGAGTCTGACT +
Preference number: 5 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLCGKLN*LWLSLT
Trigger: AGTCAGACTCAGCCAAAGCAAATTCAGCTTTCCACA...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCCTTCCTTCAGATCGTTaGGTTCTGGGTTGGACCACT +
Preference number: 5 (lower is better)
Translates to: FASITPHFGLGVHQSLSGLPSDR*VLGWTT
Trigger: AGTGGTCCAACCCAGAACCAAACGATCTGAAGGAAG...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417329.1
ENST00000444136.6
CDS TCA 90 bp CTCCAACTCCTGTGGGCTCAAACCATCTTTGGTGGAAATGAGAAGTaGCCTTATTTCCTTCCGCAGACATTCCTGTATACGCTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: LQLLWAQTIFGGNEK*PYFLPQTFLYTLLF
Trigger: GAACAAGAGCGTATACAGGAATGTCTGCGGAAGGAAATAAGGTCACTTCTCATTTCCACCAAAGATGGTTTGAGCCCACAGGAGTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS TCA 90 bp ACTCCTTCTCCAACTCCTGTGGGCTCAAACCATCTTTGGTGGAAATaGGAAGTGACCTTATTTCCTTCCGCAGACATTCCTGTATACGCT +
Preference number: 5 (lower is better)
Translates to: TPSPTPVGSNHLWWK*EVTLFPSADIPVYA
Trigger: AGCGTATACAGGAATGTCTGCGGAAGGAAATAAGGTCACTTCTCATTTCCACCAAAGATGGTTTGAGCCCACAGGAGTTGGAGAAGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGTTCCTGTATACGCTCTaGTTCAGACATTGTGCCCTA +
Preference number: 5 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLFLYTL*FRHCAL
Trigger: TAGGGCACAATGTCTGAACAAGAGCGTATACAGGAA...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGTCTTCCCTTATGCATaGAGTTTCGAAGCTTATGGC +
Preference number: 5 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLVFPYA*SFEAYG
Trigger: GCCATAAGCTTCGAAACTCAATGCATAAGGGAAGAC...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTACCAGATTAGGCTTCTaGCAAATCTTCTGTTGTGGC +
Preference number: 5 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPTRLGF*QIFCCG
Trigger: GCCACAACAGAAGATTTGCAAGAAGCCTAATCTGGT...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGACCAGATTAGGCTTCTaGCAAATCTTCTGTTGTGGC +
Preference number: 5 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLTRLGF*QIFCCG
Trigger: GCCACAACAGAAGATTTGCAAGAAGCCTAATCTGGT...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCAGAATTCTTCCAATTaGGGCAGTGTGGAAGAATCT +
Preference number: 5 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLQNSSN*GSVEES
Trigger: AGATTCTTCCACACTGCCCAAATTGGAAGAATTCTG...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCAAAGCTGAATTTGCTTaGGCTGAGTCTGACTGTTGT +
Preference number: 5 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLKAEFA*AESDCC
Trigger: ACAACAGTCAGACTCAGCCAAAGCAAATTCAGCTTT...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTTGTGGAAAGCTGAATTaGCTTTGGCTGAGTCTGACT +
Preference number: 5 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPCGKLN*LWLSLT
Trigger: AGTCAGACTCAGCCAAAGCAAATTCAGCTTTCCACA...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGTGTGGAAAGCTGAATTaGCTTTGGCTGAGTCTGACT +
Preference number: 5 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLCGKLN*LWLSLT
Trigger: AGTCAGACTCAGCCAAAGCAAATTCAGCTTTCCACA...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCCTGGTCTACAGATTCTaGACGCTTGTCTTTGTACAA +
Preference number: 5 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLLVYRF*TLVFVQ
Trigger: TTGTACAAAGACAAGCGTCAAGAATCTGTAGACCAG...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTGAATCTCCACCTGCGTaGATTAAGCTACAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFESPPA*IKLQVS
Trigger: TGACACCTGTAGCTTAATCAACGCAGGTGGAGATTC...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS-3UTR CAA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTTCGTTTGGTTCTGGGTaGGACCACTTTGGATCTTCT +
Preference number: 5 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFSFGSG*DHFGSS
Trigger: AGAAGATCCAAAGTGGTCCAACCCAGAACCAAACGA...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000417329.1
ENST00000444136.6
CDS CCA 90 bp TATTCATCCACTACCCCCACTAATGGCTTCAAACCGCACAACTTCTaGAACTGCAAAATAGCTTTCGATGTCCAGTGTTCCTCTACTGGT +
Preference number: 5 (lower is better)
Translates to: YSSTTPTNGFKPHNF*NCKIAFDVQCSSTG
Trigger: ACCAGTAGAGGAACACTGGACATCGAAAGCTATTTTGCAGTTCCAGAAGTTGTGCGGTTTGAAGCCATTAGTGGGGGTAGTGGATGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCAAGCTTGCTATTCCTTaGGTAGATTCATCTGGAATG +
Preference number: 5 (lower is better)
Translates to: FGLGVHQSLSGWILFFSLKLAIP*VDSSGM
Trigger: CATTCCAGATGAATCTACCAAAGGAATAGCAAGCTT...GAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTGTCTTCCCTTATGCATaGAGTTTCGAAGCTTATGGC +
Preference number: 5 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFVFPYA*SFEAYG
Trigger: GCCATAAGCTTCGAAACTCAATGCATAAGGGAAGAC...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTTGTGCAATAACTGATTaGAATGTGTTCTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPCAITD*NVFSSW
Trigger: CCAGCTGGAGAACACATTCAAATCAGTTATTGCACA...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGTTCCATACAGTCTCTTaGACAGCAGCAGTAGACAAT +
Preference number: 5 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLFHTVS*TAAVDN
Trigger: ATTGTCTACTGCTGCTGTCAAAGAGACTGTATGGAA...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCAGAATTCTTCCAATTaGGGCAGTGTGGAAGAATCT +
Preference number: 5 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPQNSSN*GSVEES
Trigger: AGATTCTTCCACACTGCCCAAATTGGAAGAATTCTG...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGTGGAAAGCTGAATTaGCTTTGGCTGAGTCTGACT +
Preference number: 5 (lower is better)
Translates to: FASITPHFGLGVHQSLSGCGKLN*LWLSLT
Trigger: AGTCAGACTCAGCCAAAGCAAATTCAGCTTTCCACA...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTACATCCACTGCAGTTGTaGAACAGGGTGCTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: YYFASITPHFGLGVHQSLHPLQL*NRVLLW
Trigger: CCACAGCAGCACCCTGTTCAACAACTGCAGTGGATG...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS TCA 90 bp AGTCTGCATAATTTCTTGTTCGGCACAGCGTCTGGCGGGATGTCATaGTTTGCCATTGCCAAGTTGAGCTCTGATTTGTTTGTTTCTACT +
Preference number: 5 (lower is better)
Translates to: SLHNFLFGTASGGMS*FAIAKLSSDLFVST
Trigger: AGTAGAAACAAACAAATCAGAGCTCAACTTGGCAATGGCAAATCATGACATCCCGCCAGACGCTGTGCCGAACAAGAAATTATGCAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS CCA 90 bp ACAGGTGGTAGAGGCTTCTTATCCGCATCAAACACTAGTAAGTCTTaGTGTCCTTTCCTGAACTCAACATGGAGAATGTCACTAAGAGCT +
Preference number: 5 (lower is better)
Translates to: TGGRGFLSASNTSKS*CPFLNSTWRMSLRA
Trigger: AGCTCTTAGTGACATTCTCCATGTTGAGTTCAGGAAAGGACACCAAGACTTACTAGTGTTTGATGCGGATAAGAAGCCTCTACCACCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGAAGCTTGCTATTCCTTaGGTAGATTCATCTGGAATG +
Preference number: 5 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLKLAIP*VDSSGM
Trigger: CATTCCAGATGAATCTACCAAAGGAATAGCAAGCTT...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTTCCATGCTCATTATTaGCTTCGGTGGTTCCATGTT +
Preference number: 5 (lower is better)
Translates to: FASITPHFGLGVHQSLSGFHAHY*LRWFHV
Trigger: AACATGGAACCACCGAAGCAAATAATGAGCATGGAA...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTCAGTGTGATTCAGTCTaGAAGTCTCCACTACATTTA +
Preference number: 5 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPQCDSV*KSPLHL
Trigger: TAAATGTAGTGGAGACTTCAAGACTGAATCACACTG...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTTGTGCAATAACTGATTaGAATGTGTTCTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFCAITD*NVFSSW
Trigger: CCAGCTGGAGAACACATTCAAATCAGTTATTGCACA...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGCTGGAGACACAAGCTTaGGCTTCTATTTTCTTATCT +
Preference number: 5 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLLETQA*ASIFLS
Trigger: AGATAAGAAAATAGAAGCCAAAGCTTGTGTCTCCAG...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTTCCATACAGTCTCTTaGACAGCAGCAGTAGACAAT +
Preference number: 5 (lower is better)
Translates to: FASITPHFGLGVHQSLSGFHTVS*TAAVDN
Trigger: ATTGTCTACTGCTGCTGTCAAAGAGACTGTATGGAA...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGAAGTTGAGCTCTGATTaGTTTGTTTCTACTTGCAGC +
Preference number: 5 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLKLSSD*FVSTCS
Trigger: GCTGCAAGTAGAAACAAACAAATCAGAGCTCAACTT...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTAAGTTGAGCTCTGATTaGTTTGTTTCTACTTGCAGC +
Preference number: 5 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPKLSSD*FVSTCS
Trigger: GCTGCAAGTAGAAACAAACAAATCAGAGCTCAACTT...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTTTTGCCATTGCCAAGTaGAGCTCTGATTTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPFAIAK*SSDLFV
Trigger: AACAAACAAATCAGAGCTCAACTTGGCAATGGCAAA...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTCCCTGATCCGGATGTAGAATaGACTAGGAGAGATGATATA +
Preference number: 5 (lower is better)
Translates to: FWPGSSSKPKRLDSVFLPDPDVE*TRRDDI
Trigger: TATATCATCTCTCCTAGTCAATTCTACATCCGGATC...AGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGTATAAAGCTAAAGGGTaGAGCTCACTGAAACCCTTA +
Preference number: 5 (lower is better)
Translates to: CFNNSSFWPGSSSKPKRLYKAKG*SSLKPL
Trigger: TAAGGGTTTCAGTGAGCTCAACCCTTTAGCTTTATA...CAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCCAGAATTCTTCCAATTaGGGCAGTGTGGAAGAATCT +
Preference number: 5 (lower is better)
Translates to: FASITPHFGLGVHQSLSGQNSSN*GSVEES
Trigger: AGATTCTTCCACACTGCCCAAATTGGAAGAATTCTG...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCAGAATTCTTCCAATTaGGGCAGTGTGGAAGAATCT +
Preference number: 5 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFQNSSN*GSVEES
Trigger: AGATTCTTCCACACTGCCCAAATTGGAAGAATTCTG...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCAAAGCTGAATTTGCTTaGGCTGAGTCTGACTGTTGT +
Preference number: 5 (lower is better)
Translates to: FASITPHFGLGVHQSLSGKAEFA*AESDCC
Trigger: ACAACAGTCAGACTCAGCCAAAGCAAATTCAGCTTT...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCCTGGTCTACAGATTCTaGACGCTTGTCTTTGTACAA +
Preference number: 5 (lower is better)
Translates to: FASITPHFGLGVHQSLSGLVYRF*TLVFVQ
Trigger: TTGTACAAAGACAAGCGTCAAGAATCTGTAGACCAG...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTAAGCTTGCTATTCCTTaGGTAGATTCATCTGGAATG +
Preference number: 5 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFKLAIP*VDSSGM
Trigger: CATTCCAGATGAATCTACCAAAGGAATAGCAAGCTT...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCCAGTGTGATTCAGTCTaGAAGTCTCCACTACATTTA +
Preference number: 5 (lower is better)
Translates to: FASITPHFGLGVHQSLSGQCDSV*KSPLHL
Trigger: TAAATGTAGTGGAGACTTCAAGACTGAATCACACTG...GCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTCTGGAGACACAAGCTTaGGCTTCTATTTTCTTATCT +
Preference number: 5 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFLETQA*ASIFLS
Trigger: AGATAAGAAAATAGAAGCCAAAGCTTGTGTCTCCAG...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTTTTGCCATTGCCAAGTaGAGCTCTGATTTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFFAIAK*SSDLFV
Trigger: AACAAACAAATCAGAGCTCAACTTGGCAATGGCAAA...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
43% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTGATCCGGATGTAGAATaGACTAGGAGAGATGATATA +
Preference number: 5 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFDPDVE*TRRDDI
Trigger: TATATCATCTCTCCTAGTCAATTCTACATCCGGATC...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTGTAACTCACTCTCTTTaGACTGTGGACTTATCTTTC +
Preference number: 5 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFVTHSL*TVDLSF
Trigger: GAAAGATAAGTCCACAGTCAAAAGAGAGTGAGTTAC...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAATCATCCACTGCAGTaGTTGAACAGGGTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: YYFASITPHFGLGVHQSLNHPLQ*LNRVLL
Trigger: CAGCAGCACCCTGTTCAACAACTGCAGTGGATGATT...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS TCA 90 bp GAAAAACACCAGTCCTTCTGTGGCATTTCTTTACATGATGAATACTaGTTCTTTCCACCAAGGCTTGCAGTAAATAGATGGGAGGCAGCA +
Preference number: 5 (lower is better)
Translates to: EKHQSFCGISLHDEY*FFPPRLAVNRWEAA
Trigger: TGCTGCCTCCCATCTATTTACTGCAAGCCTTGGTGGAAAGAATCAGTATTCATCATGTAAAGAAATGCCACAGAAGGACTGGTGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAGGGCTCAAACCATCTTaGGTGGAAATGAGAAGTGAC +
Preference number: 5 (lower is better)
Translates to: YYFASITPHFGLGVHQSLGLKPS*VEMRSD
Trigger: GTCACTTCTCATTTCCACCAAAGATGGTTTGAGCCC...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTGGATTCTGTTTTTGATCGTCCAAATCTTTaGGCAAATGCCTTTTCAAAA +
Preference number: 5 (lower is better)
Translates to: SSFWPGSSSKPKRLDSVFDRPNL*ANAFSK
Trigger: TTTTGAAAAGGCATTTGCCAAAAGATTTGGACGATC...AAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS TCA 90 bp TACTTCTGGCTTATGAACTTCTACTTTCGTTCCATTTACAAGGCCTaGAGGCTGCCAAGAATCATCCCATGTATCTTTAGGGGTAGAAAA +
Preference number: 5 (lower is better)
Translates to: YFWLMNFYFRSIYKA*RLPRIIPCIFRGRK
Trigger: TTTTCTACCCCTAAAGATACATGGGATGATTCTTGGCAGCCTTCAGGCCTTGTAAATGGAACGAAAGTAGAAGTTCATAAGCCAGAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS CCA 90 bp GCATCAAACACTAGTAAGTCTTGGTGTCCTTTCCTGAACTCAACATaGAGAATGTCACTAAGAGCTCCAACAAGTTCTGTCACATTTAAG +
Preference number: 5 (lower is better)
Translates to: ASNTSKSWCPFLNST*RMSLRAPTSSVTFK
Trigger: CTTAAATGTGACAGAACTTGTTGGAGCTCTTAGTGACATTCTCCATGTTGAGTTCAGGAAAGGACACCAAGACTTACTAGTGTTTGATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS CCA 90 bp AGAAATCCTTACACAACAGAGATGTCCCGGCTGAATAAAACATTCTaGCATGACATATCGATCAGAAACCAGCTGATTAGAATAACAGCG +
Preference number: 5 (lower is better)
Translates to: RNPYTTEMSRLNKTF*HDISIRNQLIRITA
Trigger: CGCTGTTATTCTAATCAGCTGGTTTCTGATCGATATGTCATGCCAGAATGTTTTATTCAGCCGGGACATCTCTGTTGTGTAAGGATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS CCA 90 bp GGATCTCATCCTCATTTTCTTCCTTCAGATCGTTTGGTTCTGGGTTaGACCACTTTGGATCTTCTTCAAAGCTCTTATTACAGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: GSHPHFLPSDRLVLG*TTLDLLQSSYYRFS
Trigger: TGAAAACCTGTAATAAGAGCTTTGAAGAAGATCCAAAGTGGTCCAACCCAGAACCAAACGATCTGAAGGAAGAAAATGAGGATGAGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTATTCCTGTATACGCTCTaGTTCAGACATTGTGCCCTA +
Preference number: 5 (lower is better)
Translates to: YYFASITPHFGLGVHQSLFLYTL*FRHCAL
Trigger: TAGGGCACAATGTCTGAACAAGAGCGTATACAGGAA...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAACCAGATTAGGCTTCTaGCAAATCTTCTGTTGTGGC +
Preference number: 5 (lower is better)
Translates to: YYFASITPHFGLGVHQSLTRLGF*QIFCCG
Trigger: GCCACAACAGAAGATTTGCAAGAAGCCTAATCTGGT...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTATTCCATGCTCATTATTaGCTTCGGTGGTTCCATGTT +
Preference number: 5 (lower is better)
Translates to: YYFASITPHFGLGVHQSLFHAHY*LRWFHV
Trigger: AACATGGAACCACCGAAGCAAATAATGAGCATGGAA...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTATTCCATACAGTCTCTTaGACAGCAGCAGTAGACAAT +
Preference number: 5 (lower is better)
Translates to: YYFASITPHFGLGVHQSLFHTVS*TAAVDN
Trigger: ATTGTCTACTGCTGCTGTCAAAGAGACTGTATGGAA...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAAAAGCTGAATTTGCTTaGGCTGAGTCTGACTGTTGT +
Preference number: 5 (lower is better)
Translates to: YYFASITPHFGLGVHQSLKAEFA*AESDCC
Trigger: ACAACAGTCAGACTCAGCCAAAGCAAATTCAGCTTT...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTACTGGTCTACAGATTCTaGACGCTTGTCTTTGTACAA +
Preference number: 5 (lower is better)
Translates to: YYFASITPHFGLGVHQSLLVYRF*TLVFVQ
Trigger: TTGTACAAAGACAAGCGTCAAGAATCTGTAGACCAG...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTACTGGAGACACAAGCTTaGGCTTCTATTTTCTTATCT +
Preference number: 5 (lower is better)
Translates to: YYFASITPHFGLGVHQSLLETQA*ASIFLS
Trigger: AGATAAGAAAATAGAAGCCAAAGCTTGTGTCTCCAG...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTATATAAAGCTAAAGGGTaGAGCTCACTGAAACCCTTA +
Preference number: 5 (lower is better)
Translates to: YYFASITPHFGLGVHQSLYKAKG*SSLKPL
Trigger: TAAGGGTTTCAGTGAGCTCAACCCTTTAGCTTTATA...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS-3UTR CAA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAGTAACTCACTCTCTTTaGACTGTGGACTTATCTTTC +
Preference number: 5 (lower is better)
Translates to: YYFASITPHFGLGVHQSLVTHSL*TVDLSF
Trigger: GAAAGATAAGTCCACAGTCAAAAGAGAGTGAGTTAC...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS GCA 90 bp TCTGAAGCCGCATTAAGCACTTCAAACATAGAGAGAAATCCATATTaGATGTATTGGAATGATCGTCCAAATCTTTTGGCAAATGCCTTT +
Preference number: 5 (lower is better)
Translates to: SEAALSTSNIERNPY*MYWNDRPNLLANAF
Trigger: AAAGGCATTTGCCAAAAGATTTGGACGATCATTCCAATACATGCAATATGGATTTCTCTCTATGTTTGAAGTGCTTAATGCGGCTTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS-3UTR CAA 90 bp TACTATTTTGCTTCAATAACTCCTCATTTTGGCCTGGGAGTTCATCAAAGCCTAGATCGTCCAAATCTTTaGGCAAATGCCTTTTCAAAA +
Preference number: 5 (lower is better)
Translates to: YYFASITPHFGLGVHQSLDRPNL*ANAFSK
Trigger: TTTTGAAAAGGCATTTGCCAAAAGATTTGGACGATC...TAGGCTTTGATGAACTCCCAGGCCAAAATGAGGAGTTATTGAAGCAAAATAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS GCA 72 bp TCGGCCCGGCACCGCCCTGCTGCCAGTCACCCGTCTTaGCCCCACCGCGCCCTGACGCCAGCGCTGCTGGTG +
Preference number: 6 (lower is better)
Translates to: SARHRPAASHPS*PHRALTPALLV
Trigger: CACCAGCAGCGCTGGCGTCAGGGCGCGGTGGGGGCAAGACGGGTGACTGGCAGCAGGGCGGTGCCGGGCCGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS TCA 72 bp CTGCTGCCAGTCACCCGTCTTGCCCCCACCGCGCCCTaGCGCCAGCGCTGCTGGTGCGGGCCGAGTAGAGAT +
Preference number: 6 (lower is better)
Translates to: LLPVTRLAPTAP*RQRCWCGPSRD
Trigger: ATCTCTACTCGGCCCGCACCAGCAGCGCTGGCGTCAGGGCGCGGTGGGGGCAAGACGGGTGACTGGCAGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS CCA 72 bp CCAACGTCTCTCGGTGACCCTCACGGGAGCGGGGCGTaGCCCTTCCACCTGCCCTGGCGGCTCTCTGCAACC +
Preference number: 6 (lower is better)
Translates to: PTSLGDPHGSGA*PFHLPWRLSAT
Trigger: GGTTGCAGAGAGCCGCCAGGGCAGGTGGAAGGGCCACGCCCCGCTCCCGTGAGGGTCACCGAGAGACGTTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS GCA 72 bp GTGACCCTCACGGGAGCGGGGCGTGGCCCTTCCACCTaGCCTGGCGGCTCTCTGCAACCTGAGGTGGAAAGG +
Preference number: 6 (lower is better)
Translates to: VTLTGAGRGPST*PGGSLQPEVER
Trigger: CCTTTCCACCTCAGGTTGCAGAGAGCCGCCAGGGCAGGTGGAAGGGCCACGCCCCGCTCCCGTGAGGGTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS CAA 90 bp TGCCCCTGGCCATGCGGAGGCGTTAACTGGGGTTCCTGTCGGGTGTaGGACTCCAACGCAAACTTCCCATCCGAAGCCTTCCAGGATCCC +
Preference number: 6 (lower is better)
Translates to: CPWPCGGVNWGSCRV*DSNANFPSEAFQDP
Trigger: GGGATCCTGGAAGGCTTCGGATGGGAAGTTTGCGTTGGAGTCCAACACCCGACAGGAACCCCAGTTAACGCCTCCGCATGGCCAGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS CAA 90 bp GCTTGCGCGTGGCCGGGCGATTCAAGCCCTGAATCTCCACCTGCGTaGATTAAGCTACAGGTGTCAAGAACTCTGCCCCTGGCCATGCGG +
Preference number: 6 (lower is better)
Translates to: ACAWPGDSSPESPPA*IKLQVSRTLPLAMR
Trigger: CCGCATGGCCAGGGGCAGAGTTCTTGACACCTGTAGCTTAATCAACGCAGGTGGAGATTCAGGGCTTGAATCGCCCGGCCACGCGCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS CCA 72 bp CAAGAACTCTGCCCCTGGCCATGCGGAGGCGTTAACTaGGGTTCCTGTCGGGTGTTGGACTCCAACGCAAAC +
Preference number: 6 (lower is better)
Translates to: QELCPWPCGGVN*GSCRVLDSNAN
Trigger: GTTTGCGTTGGAGTCCAACACCCGACAGGAACCCCAGTTAACGCCTCCGCATGGCCAGGGGCAGAGTTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS CCA 72 bp CATGCGGAGGCGTTAACTGGGGTTCCTGTCGGGTGTTaGACTCCAACGCAAACTTCCCATCCGAAGCCTTCC +
Preference number: 6 (lower is better)
Translates to: HAEALTGVPVGC*TPTQTSHPKPS
Trigger: GGAAGGCTTCGGATGGGAAGTTTGCGTTGGAGTCCAACACCCGACAGGAACCCCAGTTAACGCCTCCGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS CAA 72 bp CCATGCGGAGGCGTTAACTGGGGTTCCTGTCGGGTGTaGGACTCCAACGCAAACTTCCCATCCGAAGCCTTC +
Preference number: 6 (lower is better)
Translates to: PCGGVNWGSCRV*DSNANFPSEAF
Trigger: GAAGGCTTCGGATGGGAAGTTTGCGTTGGAGTCCAACACCCGACAGGAACCCCAGTTAACGCCTCCGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS TCA 72 bp GGCCGGGCGATTCAAGCCCTGAATCTCCACCTGCGTTaGTTAAGCTACAGGTGTCAAGAACTCTGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: GRAIQALNLHLR*LSYRCQELCPW
Trigger: CCAGGGGCAGAGTTCTTGACACCTGTAGCTTAATCAACGCAGGTGGAGATTCAGGGCTTGAATCGCCCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS TCA 72 bp TCCAGTTTTAAGGGTAATAAGGCAGAAGTAGTAGTATaGGGGTGCCCTGCGGCTTGCGCGTGGCCGGGCGAT +
Preference number: 6 (lower is better)
Translates to: SSFKGNKAEVVV*GCPAACAWPGD
Trigger: ATCGCCCGGCCACGCGCAAGCCGCAGGGCACCCTCATACTACTACTTCTGCCTTATTACCCTTAAAACTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS CAA 72 bp TGGCCGGGCGATTCAAGCCCTGAATCTCCACCTGCGTaGATTAAGCTACAGGTGTCAAGAACTCTGCCCCTG +
Preference number: 6 (lower is better)
Translates to: WPGDSSPESPPA*IKLQVSRTLPL
Trigger: CAGGGGCAGAGTTCTTGACACCTGTAGCTTAATCAACGCAGGTGGAGATTCAGGGCTTGAATCGCCCGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS CCA 72 bp CATTTTGGCCTGGGAGTTCATCAAAGCCTAAGCGGCTaGATTCTGTTTTTCTCCCTCCTCCCTCCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: HFGLGVHQSLSG*ILFFSLLPPSL
Trigger: GAGGGAGGGAGGGAGGAGGGAGAAAAACAGAATCCAGCCGCTTAGGCTTTGATGAACTCCCAGGCCAAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS GCA 72 bp CTGTTGTTGGGTTCAGACTGGCTCCCGTCTGCTGACTaGTCTGACTGGGTAAGAGAGGTACAGAATTCTTCC +
Preference number: 6 (lower is better)
Translates to: LLLGSDWLPSAD*SDWVREVQNSS
Trigger: GGAAGAATTCTGTACCTCTCTTACCCAGTCAGAGCAGTCAGCAGACGGGAGCCAGTCTGAACCCAACAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS CCA 72 bp CGCCAACAGGTCCTTCAACTCACTCTTCACAACAGCTaGAAGAATAGGGGCAACCCTTCCTCGGTAAGGTAC +
Preference number: 6 (lower is better)
Translates to: RQQVLQLTLHNS*KNRGNPSSVRY
Trigger: GTACCTTACCGAGGAAGGGTTGCCCCTATTCTTCCAGCTGTTGTGAAGAGTGAGTTGAAGGACCTGTTGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS CAA 90 bp AGCTCCATAGTGGACCGATACCCAAGGATTCGGAGTGGTAGATGGTaGCCAACCATCAAAAGGTACTCCTTCTCCAACTCCTGTGGGCTC +
Preference number: 6 (lower is better)
Translates to: SSIVDRYPRIRSGRW*PTIKRYSFSNSCGL
Trigger: GAGCCCACAGGAGTTGGAGAAGGAGTACCTTTTGATGGTTGGCAACCATCTACCACTCCGAATCCTTGGGTATCGGTCCACTATGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS CAA 90 bp CTGCAGTTGTTGAACAGGGTGCTGCTGTGGAAAGCTGAATTTGCTTaGGCTGAGTCTGACTGTTGTTGGGTTCAGACTGGCTCCCGTCTG +
Preference number: 6 (lower is better)
Translates to: LQLLNRVLLWKAEFA*AESDCCWVQTGSRL
Trigger: CAGACGGGAGCCAGTCTGAACCCAACAACAGTCAGACTCAGCCAAAGCAAATTCAGCTTTCCACAGCAGCACCCTGTTCAACAACTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS CAA 90 bp CCACAGAACCAGAGGGCTTTTCTGCGGAATCATCCACTGCAGTTGTaGAACAGGGTGCTGCTGTGGAAAGCTGAATTTGCTTTGGCTGAG +
Preference number: 6 (lower is better)
Translates to: PQNQRAFLRNHPLQL*NRVLLWKAEFALAE
Trigger: CTCAGCCAAAGCAAATTCAGCTTTCCACAGCAGCACCCTGTTCAACAACTGCAGTGGATGATTCCGCAGAAAAGCCCTCTGGTTCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS CCA 72 bp TCTCACCCAAGCCAAAGAACAAGGGATAGCCTGAGCTaGAAGCTTTGTGTAGCAGCACTTGAGGAACCTCAG +
Preference number: 6 (lower is better)
Translates to: SHPSQRTRDSLS*KLCVAALEEPQ
Trigger: CTGAGGTTCCTCAAGTGCTGCTACACAAAGCTTCCAGCTCAGGCTATCCCTTGTTCTTTGGCTTGGGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS CCA 72 bp AAAGCTGAATTTGCTTTGGCTGAGTCTGACTGTTGTTaGGTTCAGACTGGCTCCCGTCTGCTGACTGCTCTG +
Preference number: 6 (lower is better)
Translates to: KAEFALAESDCC*VQTGSRLLTAL
Trigger: CAGAGCAGTCAGCAGACGGGAGCCAGTCTGAACCCAACAACAGTCAGACTCAGCCAAAGCAAATTCAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS CAA 72 bp GTGGACCGATACCCAAGGATTCGGAGTGGTAGATGGTaGCCAACCATCAAAAGGTACTCCTTCTCCAACTCC +
Preference number: 6 (lower is better)
Translates to: VDRYPRIRSGRW*PTIKRYSFSNS
Trigger: GGAGTTGGAGAAGGAGTACCTTTTGATGGTTGGCAACCATCTACCACTCCGAATCCTTGGGTATCGGTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS TCA 72 bp CCAGTTCTCATCCCAAATATCATCACCTATGGTCACTaGCTCCAGGCATGGCATTCCAGTGGGGATCTCATC +
Preference number: 6 (lower is better)
Translates to: PVLIPNIITYGH*LQAWHSSGDLI
Trigger: GATGAGATCCCCACTGGAATGCCATGCCTGGAGTCAGTGACCATAGGTGATGATATTTGGGATGAGAACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS GCA 72 bp TGGACCGATACCCAAGGATTCGGAGTGGTAGATGGTTaGCAACCATCAAAAGGTACTCCTTCTCCAACTCCT +
Preference number: 6 (lower is better)
Translates to: WTDTQGFGVVDG*QPSKGTPSPTP
Trigger: AGGAGTTGGAGAAGGAGTACCTTTTGATGGTTGGCAACCATCTACCACTCCGAATCCTTGGGTATCGGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS CCA 72 bp GAGGTAACCAGTTCTCATCCCAAATATCATCACCTATaGTCACTGACTCCAGGCATGGCATTCCAGTGGGGA +
Preference number: 6 (lower is better)
Translates to: EVTSSHPKYHHL*SLTPGMAFQWG
Trigger: TCCCCACTGGAATGCCATGCCTGGAGTCAGTGACCATAGGTGATGATATTTGGGATGAGAACTGGTTACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS CAA 72 bp TTGAACAGGGTGCTGCTGTGGAAAGCTGAATTTGCTTaGGCTGAGTCTGACTGTTGTTGGGTTCAGACTGGC +
Preference number: 6 (lower is better)
Translates to: LNRVLLWKAEFA*AESDCCWVQTG
Trigger: GCCAGTCTGAACCCAACAACAGTCAGACTCAGCCAAAGCAAATTCAGCTTTCCACAGCAGCACCCTGTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS CAA 72 bp CAGAGGGCTTTTCTGCGGAATCATCCACTGCAGTTGTaGAACAGGGTGCTGCTGTGGAAAGCTGAATTTGCT +
Preference number: 6 (lower is better)
Translates to: QRAFLRNHPLQL*NRVLLWKAEFA
Trigger: AGCAAATTCAGCTTTCCACAGCAGCACCCTGTTCAACAACTGCAGTGGATGATTCCGCAGAAAAGCCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS CAA 72 bp TCCGCAGACATTCCTGTATACGCTCTTGTTCAGACATaGTGCCCTACAGGACTGAAGACAGAAACGCAGCTG +
Preference number: 6 (lower is better)
Translates to: SADIPVYALVQT*CPTGLKTETQL
Trigger: CAGCTGCGTTTCTGTCTTCAGTCCTGTAGGGCACAATGTCTGAACAAGAGCGTATACAGGAATGTCTGCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS CAA 90 bp TTTCCACAGAACCAGAGGGCTTTTCTGCGGAATCATCCACTGCAGTaGTTGAACAGGGTGCTGCTGTGGAAAGCTGAATTTGCTTTGGCT +
Preference number: 6 (lower is better)
Translates to: FPQNQRAFLRNHPLQ*LNRVLLWKAEFALA
Trigger: AGCCAAAGCAAATTCAGCTTTCCACAGCAGCACCCTGTTCAACAACTGCAGTGGATGATTCCGCAGAAAAGCCCTCTGGTTCTGTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS CCA 72 bp ATAGTGGACCGATACCCAAGGATTCGGAGTGGTAGATaGTTGCCAACCATCAAAAGGTACTCCTTCTCCAAC +
Preference number: 6 (lower is better)
Translates to: IVDRYPRIRSGR*LPTIKRYSFSN
Trigger: GTTGGAGAAGGAGTACCTTTTGATGGTTGGCAACCATCTACCACTCCGAATCCTTGGGTATCGGTCCACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS CAA 72 bp CCTTATTTCCTTCCGCAGACATTCCTGTATACGCTCTaGTTCAGACATTGTGCCCTACAGGACTGGTCTAGG +
Preference number: 6 (lower is better)
Translates to: PYFLPQTFLYTL*FRHCALQDWSR
Trigger: CCTAGACCAGTCCTGTAGGGCACAATGTCTGAACAAGAGCGTATACAGGAATGTCTGCGGAAGGAAATAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294848.12
ENST00000444136.6
CDS CAA 72 bp AACCAGAGGGCTTTTCTGCGGAATCATCCACTGCAGTaGTTGAACAGGGTGCTGCTGTGGAAAGCTGAATTT +
Preference number: 6 (lower is better)
Translates to: NQRAFLRNHPLQ*LNRVLLWKAEF
Trigger: AAATTCAGCTTTCCACAGCAGCACCCTGTTCAACAACTGCAGTGGATGATTCCGCAGAAAAGCCCTCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS CAA 90 bp TTATTTCCTTCCGCAGACATTCCTGTATACGCTCTTGTTCAGACATaGTGCCCTACAGGACTGAAGACAGAAACGCAGCTGAGGAAAAGG +
Preference number: 6 (lower is better)
Translates to: LFPSADIPVYALVQT*CPTGLKTETQLRKR
Trigger: CCTTTTCCTCAGCTGCGTTTCTGTCTTCAGTCCTGTAGGGCACAATGTCTGAACAAGAGCGTATACAGGAATGTCTGCGGAAGGAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367614.5
CDS TCA 72 bp CCAACTCCTGTGGGCTCAAACCATCTTTGGTGGAAATaGGAAGTGACCTTATTTCCTTCCGCAGACATTCCT +
Preference number: 6 (lower is better)
Translates to: PTPVGSNHLWWK*EVTLFPSADIP
Trigger: AGGAATGTCTGCGGAAGGAAATAAGGTCACTTCTCATTTCCACCAAAGATGGTTTGAGCCCACAGGAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS CCA 72 bp ACTACCCCCACTAATGGCTTCAAACCGCACAACTTCTaGAACTGCAAAATAGCTTTCGATGTCCAGTGTTCC +
Preference number: 6 (lower is better)
Translates to: TTPTNGFKPHNF*NCKIAFDVQCS
Trigger: GGAACACTGGACATCGAAAGCTATTTTGCAGTTCCAGAAGTTGTGCGGTTTGAAGCCATTAGTGGGGGTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS CAA 72 bp TACTCCTTCTCCAACTCCTGTGGGCTCAAACCATCTTaGGTGGAAATGAGAAGTGACCTTATTTCCTTCCGC +
Preference number: 6 (lower is better)
Translates to: YSFSNSCGLKPS*VEMRSDLISFR
Trigger: GCGGAAGGAAATAAGGTCACTTCTCATTTCCACCAAAGATGGTTTGAGCCCACAGGAGTTGGAGAAGGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS CAA 72 bp GTTCCATGTTTGAAGTGGGTTGTGAAAAGCATGGCTTaGCTACCGGAAAGCCTGTGGAGTATGACCCTTGTT +
Preference number: 6 (lower is better)
Translates to: VPCLKWVVKSMA*LPESLWSMTLV
Trigger: AACAAGGGTCATACTCCACAGGCTTTCCGGTAGCAAAGCCATGCTTTTCACAACCCACTTCAAACATGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS CAA 90 bp ATCAAAAGGTACTCCTTCTCCAACTCCTGTGGGCTCAAACCATCTTaGGTGGAAATGAGAAGTGACCTTATTTCCTTCCGCAGACATTCC +
Preference number: 6 (lower is better)
Translates to: IKRYSFSNSCGLKPS*VEMRSDLISFRRHS
Trigger: GGAATGTCTGCGGAAGGAAATAAGGTCACTTCTCATTTCCACCAAAGATGGTTTGAGCCCACAGGAGTTGGAGAAGGAGTACCTTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS GCA 72 bp CCCACTAATGGCTTCAAACCGCACAACTTCTGGAACTaGAAAATAGCTTTCGATGTCCAGTGTTCCTCTACT +
Preference number: 6 (lower is better)
Translates to: PTNGFKPHNFWN*KIAFDVQCSST
Trigger: AGTAGAGGAACACTGGACATCGAAAGCTATTTTGCAGTTCCAGAAGTTGTGCGGTTTGAAGCCATTAGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS CCA 72 bp TGCTCATTATTTGCTTCGGTGGTTCCATGTTTGAAGTaGGTTGTGAAAAGCATGGCTTTGCTACCGGAAAGC +
Preference number: 6 (lower is better)
Translates to: CSLFASVVPCLK*VVKSMALLPES
Trigger: GCTTTCCGGTAGCAAAGCCATGCTTTTCACAACCCACTTCAAACATGGAACCACCGAAGCAAATAATGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS TCA 72 bp CGGTCCAGAATAAATACTAGGTCTTCCCTTATGCATTaGGTTTCGAAGCTTATGGCTGCTCCTCTGTTTTGC +
Preference number: 6 (lower is better)
Translates to: RSRINTRSSLMH*VSKLMAAPLFC
Trigger: GCAAAACAGAGGAGCAGCCATAAGCTTCGAAACTCAATGCATAAGGGAAGACCTAGTATTTATTCTGGACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS CAA 72 bp GGCCCTCCACTGGATGTCGTGTATAAAGCTAAAGGGTaGAGCTCACTGAAACCCTTAGAAGAGATATTTTCT +
Preference number: 6 (lower is better)
Translates to: GPPLDVVYKAKG*SSLKPLEEIFS
Trigger: AGAAAATATCTCTTCTAAGGGTTTCAGTGAGCTCAACCCTTTAGCTTTATACACGACATCCAGTGGAGGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS TCA 72 bp AAAGCATGGCTTTGCTACCGGAAAGCCTGTGGAGTATaGCCCTTGTTTCATTCTAAATGGCTGGGTAAAAAT +
Preference number: 6 (lower is better)
Translates to: KAWLCYRKACGV*PLFHSKWLGKN
Trigger: ATTTTTACCCAGCCATTTAGAATGAAACAAGGGTCATACTCCACAGGCTTTCCGGTAGCAAAGCCATGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS GCA 72 bp GTCTTCCCTTATGCATTGAGTTTCGAAGCTTATGGCTaGTCCTCTGTTTTGCAACTAAGCTTGCTATTCCTT +
Preference number: 6 (lower is better)
Translates to: VFPYALSFEAYG*SSVLQLSLLFL
Trigger: AAGGAATAGCAAGCTTAGTTGCAAAACAGAGGAGCAGCCATAAGCTTCGAAACTCAATGCATAAGGGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS CCA 72 bp ACTAGTAAGTCTTGGTGTCCTTTCCTGAACTCAACATaGAGAATGTCACTAAGAGCTCCAACAAGTTCTGTC +
Preference number: 6 (lower is better)
Translates to: TSKSWCPFLNST*RMSLRAPTSSV
Trigger: GACAGAACTTGTTGGAGCTCTTAGTGACATTCTCCATGTTGAGTTCAGGAAAGGACACCAAGACTTACTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS CCA 72 bp AGAGGCTTCTTATCCGCATCAAACACTAGTAAGTCTTaGTGTCCTTTCCTGAACTCAACATGGAGAATGTCA +
Preference number: 6 (lower is better)
Translates to: RGFLSASNTSKS*CPFLNSTWRMS
Trigger: TGACATTCTCCATGTTGAGTTCAGGAAAGGACACCAAGACTTACTAGTGTTTGATGCGGATAAGAAGCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS CCA 72 bp TACACAACAGAGATGTCCCGGCTGAATAAAACATTCTaGCATGACATATCGATCAGAAACCAGCTGATTAGA +
Preference number: 6 (lower is better)
Translates to: YTTEMSRLNKTF*HDISIRNQLIR
Trigger: TCTAATCAGCTGGTTTCTGATCGATATGTCATGCCAGAATGTTTTATTCAGCCGGGACATCTCTGTTGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS CAA 90 bp CTGGCACTCATAAGACAAAATCAAAGACAGCTGGTCTACAGATTCTaGACGCTTGTCTTTGTACAATGTAATAGCACGGCTGCTAGAAAA +
Preference number: 6 (lower is better)
Translates to: LALIRQNQRQLVYRF*TLVFVQCNSTAARK
Trigger: TTTTCTAGCAGCCGTGCTATTACATTGTACAAAGACAAGCGTCAAGAATCTGTAGACCAGCTGTCTTTGATTTTGTCTTATGAGTGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS TCA 72 bp CAGTCCTTCTGTGGCATTTCTTTACATGATGAATACTaGTTCTTTCCACCAAGGCTTGCAGTAAATAGATGG +
Preference number: 6 (lower is better)
Translates to: QSFCGISLHDEY*FFPPRLAVNRW
Trigger: CCATCTATTTACTGCAAGCCTTGGTGGAAAGAATCAGTATTCATCATGTAAAGAAATGCCACAGAAGGACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS CAA 72 bp CTGCTCCTCTGTTTTGCAACTAAGCTTGCTATTCCTTaGGTAGATTCATCTGGAATGGCTTTCAGTATTACA +
Preference number: 6 (lower is better)
Translates to: LLLCFATKLAIP*VDSSGMAFSIT
Trigger: TGTAATACTGAAAGCCATTCCAGATGAATCTACCAAAGGAATAGCAAGCTTAGTTGCAAAACAGAGGAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6
CDS CAA 72 bp ATAAGACAAAATCAAAGACAGCTGGTCTACAGATTCTaGACGCTTGTCTTTGTACAATGTAATAGCACGGCT +
Preference number: 6 (lower is better)
Translates to: IRQNQRQLVYRF*TLVFVQCNSTA
Trigger: AGCCGTGCTATTACATTGTACAAAGACAAGCGTCAAGAATCTGTAGACCAGCTGTCTTTGATTTTGTCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000417329.1
ENST00000444136.6
CDS CAA 72 bp TCTCCAGCTGGTTTAATTTTTCAGTGTGATTCAGTCTaGAAGTCTCCACTACATTTAACTTGGAAGTCTTTT +
Preference number: 6 (lower is better)
Translates to: SPAGLIFQCDSV*KSPLHLTWKSF
Trigger: AAAAGACTTCCAAGTTAAATGTAGTGGAGACTTCAAGACTGAATCACACTGAAAAATTAAACCAGCTGGAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294848.12
ENST00000367614.5
ENST00000444136.6