RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TDRD12 (Homo sapiens)

Ensembl gene IDs: ENSG00000173809

Ensembl transcript IDs: ENST00000421545.2, ENST00000444215.6, ENST00000564769.2, ENST00000637289.1, ENST00000639142.1, ENST00000647536.1

Found 486 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCAGCTGGTGCGCACGGGGCGCCACTGGACGGCGGCCTGGTCTCTaGCCCCAGAGCTCCACCAACAGGGCAGCAGCCACATGCAGAGAA +
Preference number: 1 (lower is better)
Translates to: GSWCARGATGRRPGL*PQSSTNRAAATCRE
Trigger: TTCTCTGCATGTGGCTGCTGCCCTGTTGGTGGAGCTCTGGGGGCAGAGACCAGGCCGCCGTCCAGTGGCGCCCCGTGCGCACCAGCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR CCA 90 bp CACCTGGGTGTAAACAGCAGGCAGCTGGTGCGCACGGGGCGCCACTaGACGGCGGCCTGGTCTCTGCCCCCAGAGCTCCACCAACAGGGC +
Preference number: 1 (lower is better)
Translates to: HLGVNSRQLVRTGRH*TAAWSLPPELHQQG
Trigger: GCCCTGTTGGTGGAGCTCTGGGGGCAGAGACCAGGCCGCCGTCCAGTGGCGCCCCGTGCGCACCAGCTGCCTGCTGTTTACACCCAGGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR TCA 90 bp AGACAGTGCATTTCATCACCCAGATGCATGTCTGCTCTGCCAGGGTaGGTGGCGAGAGGCGCCAGACAGGACAGACAAGCCGGCGGAATC +
Preference number: 1 (lower is better)
Translates to: RQCISSPRCMSALPG*VARGARQDRQAGGI
Trigger: GATTCCGCCGGCTTGTCTGTCCTGTCTGGCGCCTCTCGCCACTCACCCTGGCAGAGCAGACATGCATCTGGGTGATGAAATGCACTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR GCA 90 bp CTGACTCCAGACAGTGCATTTCATCACCCAGATGCATGTCTGCTCTaGCAGGGTGAGTGGCGAGAGGCGCCAGACAGGACAGACAAGCCG +
Preference number: 1 (lower is better)
Translates to: LTPDSAFHHPDACLL*QGEWREAPDRTDKP
Trigger: CGGCTTGTCTGTCCTGTCTGGCGCCTCTCGCCACTCACCCTGGCAGAGCAGACATGCATCTGGGTGATGAAATGCACTGTCTGGAGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR GCA 90 bp GTCATTCACCTTCTCTTTCACTCTCACTGTCGTCATCCTCTGAAGTaGTGCTACTGTCTTCAACCACCTCTGTCACTGTGTACGGCAGGT +
Preference number: 1 (lower is better)
Translates to: VIHLLFHSHCRHPLK*CYCLQPPLSLCTAG
Trigger: ACCTGCCGTACACAGTGACAGAGGTGGTTGAAGACAGTAGCAGCACTTCAGAGGATGACGACAGTGAGAGTGAAAGAGAAGGTGAATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR GCA 90 bp GACAGCTTGATGACAAAGTTCACCTCTAGTTCAAGCGGTGGCTTCTaGTGGGACATACATAAGCCTGGGCATTGGCGCTTTCTGATACAA +
Preference number: 1 (lower is better)
Translates to: DSLMTKFTSSSSGGF*WDIHKPGHWRFLIQ
Trigger: TTGTATCAGAAAGCGCCAATGCCCAGGCTTATGTATGTCCCAGCAGAAGCCACCGCTTGAACTAGAGGTGAACTTTGTCATCAAGCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR CCA 90 bp GAAGCTAGAAGAAGAAAGACCTGCGCATTCATTGATCTTATTAACTaGGTAAGGGACGCCGACTCCTCCATGCCGAGTGGACGTACCTTT +
Preference number: 1 (lower is better)
Translates to: EARRRKTCAFIDLIN*VRDADSSMPSGRTF
Trigger: AAAGGTACGTCCACTCGGCATGGAGGAGTCGGCGTCCCTTACCCAGTTAATAAGATCAATGAATGCGCAGGTCTTTCTTCTTCTAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564769.2
3UTR CCA 90 bp CCACCAACAGGGCAGCAGCCACATGCAGAGAAACAGACACTGATATaGGTGTTAGAAGAGCTCCACAGTCAAAACCTTCACCAGCAAAAA +
Preference number: 1 (lower is better)
Translates to: PPTGQQPHAEKQTLI*VLEELHSQNLHQQK
Trigger: TTTTTGCTGGTGAAGGTTTTGACTGTGGAGCTCTTCTAACACCCATATCAGTGTCTGTTTCTCTGCATGTGGCTGCTGCCCTGTTGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR TCA 90 bp ACAGGAAACACATTGTCACTAGCTATTATCATTTGCTGTGCTGTATaGAAGAGACTCGGCGCACCTGGGTGTAAACAGCAGGCAGCTGGT +
Preference number: 1 (lower is better)
Translates to: TGNTLSLAIIICCAV*KRLGAPGCKQQAAG
Trigger: ACCAGCTGCCTGCTGTTTACACCCAGGTGCGCCGAGTCTCTTTCATACAGCACAGCAAATGATAATAGCTAGTGACAATGTGTTTCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR GCA 90 bp ATTCACCTTCTCTTTCACTCTCACTGTCGTCATCCTCTGAAGTGCTaGTACTGTCTTCAACCACCTCTGTCACTGTGTACGGCAGGTTTT +
Preference number: 1 (lower is better)
Translates to: IHLLFHSHCRHPLKC*YCLQPPLSLCTAGF
Trigger: AAAACCTGCCGTACACAGTGACAGAGGTGGTTGAAGACAGTAGCAGCACTTCAGAGGATGACGACAGTGAGAGTGAAAGAGAAGGTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR CCA 90 bp TCTTTGGCCAGAGTGATTACAGGTTCATCGTTTCTAATCACACATTaGCAGTCATCTTTCCTTATGTTGCCCCGCAGCTCCAGATCAGCC +
Preference number: 1 (lower is better)
Translates to: SLARVITGSSFLITH*QSSFLMLPRSSRSA
Trigger: GGCTGATCTGGAGCTGCGGGGCAACATAAGGAAAGATGACTGCCAATGTGTGATTAGAAACGATGAACCTGTAATCACTCTGGCCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564769.2
3UTR TCA 90 bp TTGTTTAGAACCAGCAGCTTCACCCCGGAAAGGCCTGGGTCTTACTaGGCAATCCAATTTCTATCCCTGGACTATCTCTTCATCAGAAGT +
Preference number: 1 (lower is better)
Translates to: LFRTSSFTPERPGSY*AIQFLSLDYLFIRS
Trigger: ACTTCTGATGAAGAGATAGTCCAGGGATAGAAATTGGATTGCTCAGTAAGACCCAGGCCTTTCCGGGGTGAAGCTGCTGGTTCTAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR CCA 90 bp AGCTTGATGACAAAGTTCACCTCTAGTTCAAGCGGTGGCTTCTGCTaGGACATACATAAGCCTGGGCATTGGCGCTTTCTGATACAAAAA +
Preference number: 1 (lower is better)
Translates to: SLMTKFTSSSSGGFC*DIHKPGHWRFLIQK
Trigger: TTTTTGTATCAGAAAGCGCCAATGCCCAGGCTTATGTATGTCCCAGCAGAAGCCACCGCTTGAACTAGAGGTGAACTTTGTCATCAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR TCA 90 bp TCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCTCTTaGGGACGTCATTCACCTTCTCTTTCACTCTCACTGTCGTCATCC +
Preference number: 1 (lower is better)
Translates to: SHGNIHFCSTSSSRS*GRHSPSLSLSLSSS
Trigger: GGATGACGACAGTGAGAGTGAAAGAGAAGGTGAATGACGTCCTCAAGAGCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR GCA 90 bp TTGGAACCATTTTATTTGTGGGTGGAAGCTAGAAGAAGAAAGACCTaGGCATTCATTGATCTTATTAACTGGGTAAGGGACGCCGACTCC +
Preference number: 1 (lower is better)
Translates to: LEPFYLWVEARRRKT*AFIDLINWVRDADS
Trigger: GGAGTCGGCGTCCCTTACCCAGTTAATAAGATCAATGAATGCGCAGGTCTTTCTTCTTCTAGCTTCCACCCACAAATAAAATGGTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564769.2
3UTR TCA 90 bp GCGGAATCAGACCACACCTGCTGTTTCTCTGTGTCCACCCTCCTTTaGTGGTCTTATCATCAGCCTATTTTTAAGTCAATGAAGAATTTC +
Preference number: 1 (lower is better)
Translates to: AESDHTCCFSVSTLL*WSYHQPIFKSMKNF
Trigger: GAAATTCTTCATTGACTTAAAAATAGGCTGATGATAAGACCATCAAAGGAGGGTGGACACAGAGAAACAGCAGGTGTGGTCTGATTCCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR TCA 90 bp GCAGGCAGCTGGTGCGCACGGGGCGCCACTGGACGGCGGCCTGGTCTCTGCCCCCTCTGTCTGAGTAGGTaGCACCATGCCTCCCTTCTC +
Preference number: 2 (lower is better)
Translates to: AGSWCARGATGRRPGLCPLCLSR*HHASLL
Trigger: GAGAAGGGAGGCATGGTGTCACCTACTCAGACAGAG...GGGGCAGAGACCAGGCCGCCGTCCAGTGGCGCCCCGTGCGCACCAGCTGCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564769.2
3UTR-3UTR TCA 90 bp GCAGGCAGCTGGTGCGCACGGGGCGCCACTGGACGGCGGCCTGGTCTCTGCCCCGGCAGGAGAATTGCTTaGGCCTGTGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: AGSWCARGATGRRPGLCPGRRIA*ACEAEV
Trigger: AACCTCTGCCTCACAGGCTCAAGCAATTCTCCTGCC...GGGGCAGAGACCAGGCCGCCGTCCAGTGGCGCCCCGTGCGCACCAGCTGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR TCA 90 bp GCAGGCAGCTGGTGCGCACGGGGCGCCACTGGACGGCGGCCTGGTCTCTGCCCCAGGCCTGGGTCTTACTaGGCAATCCAATTTCTATCC +
Preference number: 2 (lower is better)
Translates to: AGSWCARGATGRRPGLCPRPGSY*AIQFLS
Trigger: GGATAGAAATTGGATTGCTCAGTAAGACCCAGGCCT...GGGGCAGAGACCAGGCCGCCGTCCAGTGGCGCCCCGTGCGCACCAGCTGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR TCA 90 bp CTGCTCTGCCAGGGTGAGTGGCGAGAGGCGCCAGACAGGACAGACAAGCCGGCGACTGTCGTCATCCTCTaGAGTGCTGCTACTGTCTTC +
Preference number: 2 (lower is better)
Translates to: LLCQGEWREAPDRTDKPATVVIL*SAATVF
Trigger: GAAGACAGTAGCAGCACTTCAGAGGATGACGACAGT...CGCCGGCTTGTCTGTCCTGTCTGGCGCCTCTCGCCACTCACCCTGGCAGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR GCA 90 bp CTGCTCTGCCAGGGTGAGTGGCGAGAGGCGCCAGACAGGACAGACAAGCCGGCGCATCCTCTGAAGTGCTaGTACTGTCTTCAACCACCT +
Preference number: 2 (lower is better)
Translates to: LLCQGEWREAPDRTDKPAHPLKC*YCLQPP
Trigger: AGGTGGTTGAAGACAGTAGCAGCACTTCAGAGGATG...CGCCGGCTTGTCTGTCCTGTCTGGCGCCTCTCGCCACTCACCCTGGCAGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR TCA 90 bp GTGAGTGGCGAGAGGCGCCAGACAGGACAGACAAGCCGGCGGAATCAGACCACATCACAGTCTTCCCAGTaGTCAAAATCAAAAGCCACG +
Preference number: 2 (lower is better)
Translates to: VSGERRQTGQTSRRNQTTSQSSQ*SKSKAT
Trigger: CGTGGCTTTTGATTTTGATCACTGGGAAGACTGTGA...TGTGGTCTGATTCCGCCGGCTTGTCTGTCCTGTCTGGCGCCTCTCGCCACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564769.2
3UTR-3UTR CCA 90 bp CGCTTTTTCAGTCAACAAAGAAACCCAAAGCACAAAAGCCAGCCTCTGGGTGTGCTCTGCCAGGGTGAGTaGCGAGAGGCGCCAGACAGG +
Preference number: 2 (lower is better)
Translates to: RFFSQQRNPKHKSQPLGVLCQGE*REAPDR
Trigger: CCTGTCTGGCGCCTCTCGCCACTCACCCTGGCAGAG...CACACCCAGAGGCTGGCTTTTGTGCTTTGGGTTTCTTTGTTGACTGAAAAAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR CCA 90 bp CAGTTGTCCTCCCTGCATTTTCACGAGTGCACAGGAAACACATTGTCACTAGCTCTCTGCCAGGGTGAGTaGCGAGAGGCGCCAGACAGG +
Preference number: 2 (lower is better)
Translates to: QLSSLHFHECTGNTLSLALCQGE*REAPDR
Trigger: CCTGTCTGGCGCCTCTCGCCACTCACCCTGGCAGAG...AGCTAGTGACAATGTGTTTCCTGTGCACTCGTGAAAATGCAGGGAGGACAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR TCA 90 bp AAGTTCACCTCTAGTTCAAGCGGTGGCTTCTGCTGGGACATACATAAGCCTGGGGGTGGGAGGATTACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: KFTSSSSGGFCWDIHKPGGGRIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTAATCCTCCCACC...CCCAGGCTTATGTATGTCCCAGCAGAAGCCACCGCTTGAACTAGAGGTGAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR GCA 90 bp AAGTTCACCTCTAGTTCAAGCGGTGGCTTCTGCTGGGACATACATAAGCCTGGGGATGCATGTCTGCTCTaGCAGGGTGAGTGGCGAGAG +
Preference number: 2 (lower is better)
Translates to: KFTSSSSGGFCWDIHKPGDACLL*QGEWRE
Trigger: CTCTCGCCACTCACCCTGGCAGAGCAGACATGCATC...CCCAGGCTTATGTATGTCCCAGCAGAAGCCACCGCTTGAACTAGAGGTGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR TCA 90 bp CAGCCACAATGCAGATGGGGTGGCGAATGTCTGCAGGGCTCACGACATGTAGGCTCTCTTTGGCCAGAGTaGTTACAGGTTCATCGTTTC +
Preference number: 2 (lower is better)
Translates to: QPQCRWGGECLQGSRHVGSLWPE*LQVHRF
Trigger: GAAACGATGAACCTGTAATCACTCTGGCCAAAGAGA...GCCTACATGTCGTGAGCCCTGCAGACATTCGCCACCCCATCTGCATTGTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564769.2
3UTR-3UTR TCA 90 bp TTCAGTCAACAAAGAAACCCAAAGCACAAAAGCCAGCCTCTGGGTGTGGCCATGGGCAGGAGAATTGCTTaGGCCTGTGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: FSQQRNPKHKSQPLGVAMGRRIA*ACEAEV
Trigger: AACCTCTGCCTCACAGGCTCAAGCAATTCTCCTGCC...CATGGCCACACCCAGAGGCTGGCTTTTGTGCTTTGGGTTTCTTTGTTGACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR TCA 90 bp ACTAGCTATTATCATTTGCTGTGCTGTATGAAAGAGACTCGGCGCACCTGGGTGCTCTGGGTGTGGCCATaGCTACATACACTCCTCCCC +
Preference number: 2 (lower is better)
Translates to: TSYYHLLCCMKETRRTWVLWVWP*LHTLLP
Trigger: GGGGAGGAGTGTATGTAGTCATGGCCACACCCAGAG...CACCCAGGTGCGCCGAGTCTCTTTCATACAGCACAGCAAATGATAATAGCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR CAA 90 bp AGAAAACTGAGCCAGAGTGTGATCCAGACCTGCTCACAGGACAGCTaGATGACAAAGTTCACCTCTAGTTCAAGCGGTGGCTTCTGCTGG +
Preference number: 2 (lower is better)
Translates to: RKLSQSVIQTCSQDS*MTKFTSSSSGGFCW
Trigger: CCAGCAGAAGCCACCGCTTGAACTAGAGGTGAACTTTGTCATCAAGCTGTCCTGTGAGCAGGTCTGGATCACACTCTGGCTCAGTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR CCA 90 bp ACTAGCTATTATCATTTGCTGTGCTGTATGAAAGAGACTCGGCGCACCTGGGTGCAGCCACAATGCAGATaGGGTGGCGAATGTCTGCAG +
Preference number: 2 (lower is better)
Translates to: TSYYHLLCCMKETRRTWVQPQCR*GGECLQ
Trigger: CTGCAGACATTCGCCACCCCATCTGCATTGTGGCTG...CACCCAGGTGCGCCGAGTCTCTTTCATACAGCACAGCAAATGATAATAGCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR TCA 90 bp CAGTTGTCCTCCCTGCATTTTCACGAGTGCACAGGAAACACATTGTCACTAGCTTCTTCCAGCCGCTCTTaGGGACGTCATTCACCTTCT +
Preference number: 2 (lower is better)
Translates to: QLSSLHFHECTGNTLSLASSSRS*GRHSPS
Trigger: AGAAGGTGAATGACGTCCTCAAGAGCGGCTGGAAGA...AGCTAGTGACAATGTGTTTCCTGTGCACTCGTGAAAATGCAGGGAGGACAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR TCA 90 bp GAGAAACAGACACTGATATGGGTGTTAGAAGAGCTCCACAGTCAAAACCTTCACCTCTGGGTGTGGCCATaGCTACATACACTCCTCCCC +
Preference number: 2 (lower is better)
Translates to: EKQTLIWVLEELHSQNLHLWVWP*LHTLLP
Trigger: GGGGAGGAGTGTATGTAGTCATGGCCACACCCAGAG...GTGAAGGTTTTGACTGTGGAGCTCTTCTAACACCCATATCAGTGTCTGTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR CCA 90 bp CAATGCAGATGGGGTGGCGAATGTCTGCAGGGCTCACGACATGTAGGCATTCAAATTGATCTTATTAACTaGGTAAGGGACGCCGACTCC +
Preference number: 2 (lower is better)
Translates to: QCRWGGECLQGSRHVGIQIDLIN*VRDADS
Trigger: GGAGTCGGCGTCCCTTACCCAGTTAATAAGATCAAT...TTGAATGCCTACATGTCGTGAGCCCTGCAGACATTCGCCACCCCATCTGCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564769.2
3UTR-3UTR TCA 90 bp GAAAACAGTGAAATTTTATTGATGATACACTGCGGAAGACATCCATACCACAACTCTGCTCTGCCAGGGTaGGTGGCGAGAGGCGCCAGA +
Preference number: 2 (lower is better)
Translates to: ENSEILLMIHCGRHPYHNSALPG*VARGAR
Trigger: TCTGGCGCCTCTCGCCACTCACCCTGGCAGAGCAGA...GTTGTGGTATGGATGTCTTCCGCAGTGTATCATCAATAAAATTTCACTGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564769.2
3UTR-3UTR GCA 90 bp GAGAAACAGACACTGATATGGGTGTTAGAAGAGCTCCACAGTCAAAACCTTCACACTGGGCAGAAAAACTaGCCAACCCAGCAGCACTCG +
Preference number: 2 (lower is better)
Translates to: EKQTLIWVLEELHSQNLHTGQKN*PTQQHS
Trigger: CGAGTGCTGCTGGGTTGGGCAGTTTTTCTGCCCAGT...GTGAAGGTTTTGACTGTGGAGCTCTTCTAACACCCATATCAGTGTCTGTTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR CAA 90 bp CTCTTTGGCCAGAGTGATTACAGGTTCATCGTTTCTAATCACACATaGGCAGTCATCTTTCCTTATGTTGCCCCGCAGCTCCAGATCAGC +
Preference number: 2 (lower is better)
Translates to: LFGQSDYRFIVSNHT*AVIFPYVAPQLQIS
Trigger: GCTGATCTGGAGCTGCGGGGCAACATAAGGAAAGATGACTGCCAATGTGTGATTAGAAACGATGAACCTGTAATCACTCTGGCCAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564769.2
3UTR-3UTR TCA 90 bp ACTAGCTATTATCATTTGCTGTGCTGTATGAAAGAGACTCGGCGCACCTGGGTGAGGCCTGGGTCTTACTaGGCAATCCAATTTCTATCC +
Preference number: 2 (lower is better)
Translates to: TSYYHLLCCMKETRRTWVRPGSY*AIQFLS
Trigger: GGATAGAAATTGGATTGCTCAGTAAGACCCAGGCCT...CACCCAGGTGCGCCGAGTCTCTTTCATACAGCACAGCAAATGATAATAGCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR TCA 90 bp ACTAGCTATTATCATTTGCTGTGCTGTATGAAAGAGACTCGGCGCACCTGGGTGCCCCACAGGCCCTTGTaGATTTCCACTAAAAAGCAA +
Preference number: 2 (lower is better)
Translates to: TSYYHLLCCMKETRRTWVPHRPL*ISTKKQ
Trigger: TTGCTTTTTAGTGGAAATTCACAAGGGCCTGTGGGG...CACCCAGGTGCGCCGAGTCTCTTTCATACAGCACAGCAAATGATAATAGCTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR GCA 90 bp TCACGAGTGCACAGGAAACACATTGTCACTAGCTATTATCATTTGCTGTGCTGTGTGCTGCAGCCACAATaGAGATGGGGTGGCGAATGT +
Preference number: 2 (lower is better)
Translates to: SRVHRKHIVTSYYHLLCCVLQPQ*RWGGEC
Trigger: ACATTCGCCACCCCATCTGCATTGTGGCTGCAGCAC...ACAGCACAGCAAATGATAATAGCTAGTGACAATGTGTTTCCTGTGCACTCGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR TCA 90 bp AAGATCTTGGGGCCGTCACACAACACTCATGTTCTATCCAAATTCTTTTCCATTTGGGGTTCCTCTGTCTaGGTAGGTGACACCATGCCT +
Preference number: 2 (lower is better)
Translates to: KILGPSHNTHVLSKFFSIWGSSV*VGDTMP
Trigger: AGGCATGGTGTCACCTACTCAGACAGAGGAACCCCA...AATGGAAAAGAATTTGGATAGAACATGAGTGTTGTGTGACGGCCCCAAGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564769.2
3UTR-3UTR TCA 90 bp ATTGTCACTAGCTATTATCATTTGCTGTGCTGTATGAAAGAGACTCGGCGCACCCCCCACAGGCCCTTGTaGATTTCCACTAAAAAGCAA +
Preference number: 2 (lower is better)
Translates to: IVTSYYHLLCCMKETRRTPHRPL*ISTKKQ
Trigger: TTGCTTTTTAGTGGAAATTCACAAGGGCCTGTGGGG...GGTGCGCCGAGTCTCTTTCATACAGCACAGCAAATGATAATAGCTAGTGACAAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR GCA 90 bp GAGAAACAGACACTGATATGGGTGTTAGAAGAGCTCCACAGTCAAAACCTTCACCATCCTCTGAAGTGCTaGTACTGTCTTCAACCACCT +
Preference number: 2 (lower is better)
Translates to: EKQTLIWVLEELHSQNLHHPLKC*YCLQPP
Trigger: AGGTGGTTGAAGACAGTAGCAGCACTTCAGAGGATG...GTGAAGGTTTTGACTGTGGAGCTCTTCTAACACCCATATCAGTGTCTGTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR GCA 90 bp TCACGAGTGCACAGGAAACACATTGTCACTAGCTATTATCATTTGCTGTGCTGTAACCTTTGTGCCATTTaGTCAGGACTCTGCAGGTCC +
Preference number: 2 (lower is better)
Translates to: SRVHRKHIVTSYYHLLCCNLCAI*SGLCRS
Trigger: GGACCTGCAGAGTCCTGAGCAAATGGCACAAAGGTT...ACAGCACAGCAAATGATAATAGCTAGTGACAATGTGTTTCCTGTGCACTCGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR CCA 90 bp AAGTTCACCTCTAGTTCAAGCGGTGGCTTCTGCTGGGACATACATAAGCCTGGGGAACCATTTTATTTGTaGGTGGAAGCTAGAAGAAGA +
Preference number: 2 (lower is better)
Translates to: KFTSSSSGGFCWDIHKPGEPFYL*VEARRR
Trigger: TCTTCTTCTAGCTTCCACCCACAAATAAAATGGTTC...CCCAGGCTTATGTATGTCCCAGCAGAAGCCACCGCTTGAACTAGAGGTGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564769.2
3UTR-3UTR TCA 90 bp ACTTTTAATTTCCCAATAGCTCACCTTTCTCGCTTTTTCAGTCAACAAAGAAACGGTGGGAGGATTACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: TFNFPIAHLSRFFSQQRNGGRIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTAATCCTCCCACC...GTTTCTTTGTTGACTGAAAAAGCGAGAAAGGTGAGCTATTGGGAAATTAAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR GCA 90 bp ACTAGCTATTATCATTTGCTGTGCTGTATGAAAGAGACTCGGCGCACCTGGGTGAAACAAGACACAGAGTaGACAGGACTTTTAATTTCC +
Preference number: 2 (lower is better)
Translates to: TSYYHLLCCMKETRRTWVKQDTE*TGLLIS
Trigger: GGAAATTAAAAGTCCTGTGCACTCTGTGTCTTGTTT...CACCCAGGTGCGCCGAGTCTCTTTCATACAGCACAGCAAATGATAATAGCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR TCA 90 bp ACTTTTAATTTCCCAATAGCTCACCTTTCTCGCTTTTTCAGTCAACAAAGAAACTCTTCCAGCCGCTCTTaGGGACGTCATTCACCTTCT +
Preference number: 2 (lower is better)
Translates to: TFNFPIAHLSRFFSQQRNSSSRS*GRHSPS
Trigger: AGAAGGTGAATGACGTCCTCAAGAGCGGCTGGAAGA...GTTTCTTTGTTGACTGAAAAAGCGAGAAAGGTGAGCTATTGGGAAATTAAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR TCA 90 bp GAAAACAGTGAAATTTTATTGATGATACACTGCGGAAGACATCCATACCACAACATTTGCTGTGCTGTATaGAAGAGACTCGGCGCACCT +
Preference number: 2 (lower is better)
Translates to: ENSEILLMIHCGRHPYHNICCAV*KRLGAP
Trigger: AGGTGCGCCGAGTCTCTTTCATACAGCACAGCAAAT...GTTGTGGTATGGATGTCTTCCGCAGTGTATCATCAATAAAATTTCACTGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564769.2
3UTR-3UTR TCA 90 bp ACTTTTAATTTCCCAATAGCTCACCTTTCTCGCTTTTTCAGTCAACAAAGAAACGTGTCCACCCTCCTTTaGTGGTCTTATCATCAGCCT +
Preference number: 2 (lower is better)
Translates to: TFNFPIAHLSRFFSQQRNVSTLL*WSYHQP
Trigger: AGGCTGATGATAAGACCATCAAAGGAGGGTGGACAC...GTTTCTTTGTTGACTGAAAAAGCGAGAAAGGTGAGCTATTGGGAAATTAAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR GCA 90 bp TTTAATTTCCCAATAGCTCACCTTTCTCGCTTTTTCAGTCAACAAAGAAACCCACGTCATCCTCTGAAGTaGTGCTACTGTCTTCAACCA +
Preference number: 2 (lower is better)
Translates to: FNFPIAHLSRFFSQQRNPRHPLK*CYCLQP
Trigger: TGGTTGAAGACAGTAGCAGCACTTCAGAGGATGACG...TGGGTTTCTTTGTTGACTGAAAAAGCGAGAAAGGTGAGCTATTGGGAAATTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR GCA 90 bp GTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTAGAAGAAGAAAGACCTaGGCATTCATTGATCTTATT +
Preference number: 2 (lower is better)
Translates to: VMTDCFLNCRSHGNIHFCRRRKT*AFIDLI
Trigger: AATAAGATCAATGAATGCGCAGGTCTTTCTTCTTCT...ACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564769.2
3UTR-3UTR CAA 90 bp GCAGGCAGCTGGTGCGCACGGGGCGCCACTGGACGGCGGCCTGGTCTCTGCCCCATCTTCCAGCCGCTCTaGAGGACGTCATTCACCTTC +
Preference number: 3 (lower is better)
Translates to: AGSWCARGATGRRPGLCPIFQPL*RTSFTF
Trigger: GAAGGTGAATGACGTCCTCAAGAGCGGCTGGAAGAT...GGGGCAGAGACCAGGCCGCCGTCCAGTGGCGCCCCGTGCGCACCAGCTGCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR CCA 72 bp CCTGCCAGTCACCCTGCGAAGGCCATAGCAGTGACCTaGGCACACTCCCGGCAGCTGTCCTGGCTGCACAGC +
Preference number: 3 (lower is better)
Translates to: PASHPAKAIAVT*AHSRQLSWLHS
Trigger: GCTGTGCAGCCAGGACAGCTGCCGGGAGTGTGCCCAGGTCACTGCTATGGCCTTCGCAGGGTGACTGGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR CAA 90 bp GCAGGCAGCTGGTGCGCACGGGGCGCCACTGGACGGCGGCCTGGTCTCTGCCCCACTAAAAAGCAACCTTaGTGCCATTTGCTCAGGACT +
Preference number: 3 (lower is better)
Translates to: AGSWCARGATGRRPGLCPTKKQP*CHLLRT
Trigger: AGTCCTGAGCAAATGGCACAAAGGTTGCTTTTTAGT...GGGGCAGAGACCAGGCCGCCGTCCAGTGGCGCCCCGTGCGCACCAGCTGCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR GCA 72 bp GACAGTGCATTTCATCACCCAGATGCATGTCTGCTCTaGCAGGGTGAGTGGCGAGAGGCGCCAGACAGGACA +
Preference number: 3 (lower is better)
Translates to: DSAFHHPDACLL*QGEWREAPDRT
Trigger: TGTCCTGTCTGGCGCCTCTCGCCACTCACCCTGGCAGAGCAGACATGCATCTGGGTGATGAAATGCACTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR CAA 90 bp GCAGGGCTCACGACATGTAGGCATTCAAAGATCACCTCCAGGCACCCCACAGGCGAGGTAAAGAAAGATTaGGTTGGCCGGGTGTGGTGG +
Preference number: 3 (lower is better)
Translates to: AGLTTCRHSKITSRHPTGEVKKD*VGRVWW
Trigger: CCACCACACCCGGCCAACCAAATCTTTCTTTACCTC...GCCTGTGGGGTGCCTGGAGGTGATCTTTGAATGCCTACATGTCGTGAGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR CAA 90 bp TTTGCTGTGCTGTATGAAAGAGACTCGGCGCACCTGGGTGTAAACAGCAGGCAGCCCACTATCTCATGGTaGAAAGGGCTGGTTCAACAG +
Preference number: 3 (lower is better)
Translates to: FAVLYERDSAHLGVNSRQPTISW*KGLVQQ
Trigger: CTGTTGAACCAGCCCTTTCAACCATGAGATAGTGGG...CTGCCTGCTGTTTACACCCAGGTGCGCCGAGTCTCTTTCATACAGCACAGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR CAA 90 bp AAGTTCACCTCTAGTTCAAGCGGTGGCTTCTGCTGGGACATACATAAGCCTGGGGGGCTGGTTCAACAGTaGCTGAGTCTAAGTGTGTAC +
Preference number: 3 (lower is better)
Translates to: KFTSSSSGGFCWDIHKPGGLVQQ*LSLSVY
Trigger: GTACACACTTAGACTCAGCAACTGTTGAACCAGCCC...CCCAGGCTTATGTATGTCCCAGCAGAAGCCACCGCTTGAACTAGAGGTGAACTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR TCA 72 bp ACCAGCAGCTTCACCCCGGAAAGGCCTGGGTCTTACTaGGCAATCCAATTTCTATCCCTGGACTATCTCTTC +
Preference number: 3 (lower is better)
Translates to: TSSFTPERPGSY*AIQFLSLDYLF
Trigger: GAAGAGATAGTCCAGGGATAGAAATTGGATTGCTCAGTAAGACCCAGGCCTTTCCGGGGTGAAGCTGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR CCA 72 bp ACAAAGTTCACCTCTAGTTCAAGCGGTGGCTTCTGCTaGGACATACATAAGCCTGGGCATTGGCGCTTTCTG +
Preference number: 3 (lower is better)
Translates to: TKFTSSSSGGFC*DIHKPGHWRFL
Trigger: CAGAAAGCGCCAATGCCCAGGCTTATGTATGTCCCAGCAGAAGCCACCGCTTGAACTAGAGGTGAACTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR CAA 90 bp CAGCTTCACCCCGGAAAGGCCTGGGTCTTACTGAGCAATCCAATTTCTATCCCTTTAGAATTCACTACCTaGGGGAAGTGGCTGTCCTCT +
Preference number: 3 (lower is better)
Translates to: QLHPGKAWVLLSNPISIPLEFTT*GKWLSS
Trigger: AGAGGACAGCCACTTCCCCAAGGTAGTGAATTCTAA...AGGGATAGAAATTGGATTGCTCAGTAAGACCCAGGCCTTTCCGGGGTGAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564769.2
3UTR GCA 72 bp CTCTTTCACTCTCACTGTCGTCATCCTCTGAAGTGCTaGTACTGTCTTCAACCACCTCTGTCACTGTGTACG +
Preference number: 3 (lower is better)
Translates to: LFHSHCRHPLKC*YCLQPPLSLCT
Trigger: CGTACACAGTGACAGAGGTGGTTGAAGACAGTAGCAGCACTTCAGAGGATGACGACAGTGAGAGTGAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR GCA 72 bp ATGACAAAGTTCACCTCTAGTTCAAGCGGTGGCTTCTaGTGGGACATACATAAGCCTGGGCATTGGCGCTTT +
Preference number: 3 (lower is better)
Translates to: MTKFTSSSSGGF*WDIHKPGHWRF
Trigger: AAAGCGCCAATGCCCAGGCTTATGTATGTCCCAGCAGAAGCCACCGCTTGAACTAGAGGTGAACTTTGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR CCA 72 bp AGAAGAAAGACCTGCGCATTCATTGATCTTATTAACTaGGTAAGGGACGCCGACTCCTCCATGCCGAGTGGA +
Preference number: 3 (lower is better)
Translates to: RRKTCAFIDLIN*VRDADSSMPSG
Trigger: TCCACTCGGCATGGAGGAGTCGGCGTCCCTTACCCAGTTAATAAGATCAATGAATGCGCAGGTCTTTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564769.2
3UTR CCA 72 bp GGGCAGCAGCCACATGCAGAGAAACAGACACTGATATaGGTGTTAGAAGAGCTCCACAGTCAAAACCTTCAC +
Preference number: 3 (lower is better)
Translates to: GQQPHAEKQTLI*VLEELHSQNLH
Trigger: GTGAAGGTTTTGACTGTGGAGCTCTTCTAACACCCATATCAGTGTCTGTTTCTCTGCATGTGGCTGCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR CAA 90 bp CGCTTTTTCAGTCAACAAAGAAACCCAAAGCACAAAAGCCAGCCTCTGGGTGTGTGTGTCCACCCTCCTTaGATGGTCTTATCATCAGCC +
Preference number: 3 (lower is better)
Translates to: RFFSQQRNPKHKSQPLGVCVHPP*MVLSSA
Trigger: GGCTGATGATAAGACCATCAAAGGAGGGTGGACACA...CACACCCAGAGGCTGGCTTTTGTGCTTTGGGTTTCTTTGTTGACTGAAAAAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR GCA 72 bp CTTCTCTTTCACTCTCACTGTCGTCATCCTCTGAAGTaGTGCTACTGTCTTCAACCACCTCTGTCACTGTGT +
Preference number: 3 (lower is better)
Translates to: LLFHSHCRHPLK*CYCLQPPLSLC
Trigger: ACACAGTGACAGAGGTGGTTGAAGACAGTAGCAGCACTTCAGAGGATGACGACAGTGAGAGTGAAAGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR CAA 90 bp CCAGCAAAAACACCAGAACTTTCTACTTCCCAAGAGCCTGCCCAATTTAGCTACTGTGTCCACCCTCCTTaGATGGTCTTATCATCAGCC +
Preference number: 3 (lower is better)
Translates to: PAKTPELSTSQEPAQFSYCVHPP*MVLSSA
Trigger: GGCTGATGATAAGACCATCAAAGGAGGGTGGACACA...GTAGCTAAATTGGGCAGGCTCTTGGGAAGTAGAAAGTTCTGGTGTTTTTGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR-3UTR CAA 90 bp GAGAAACAGACACTGATATGGGTGTTAGAAGAGCTCCACAGTCAAAACCTTCACCCTTCATGGGCTGATTaGATACCTGCCAGTCACCCT +
Preference number: 3 (lower is better)
Translates to: EKQTLIWVLEELHSQNLHPSWAD*IPASHP
Trigger: AGGGTGACTGGCAGGTATCAAATCAGCCCATGAAGG...GTGAAGGTTTTGACTGTGGAGCTCTTCTAACACCCATATCAGTGTCTGTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR TCA 72 bp TTCAAAGATCACCTCCAGGCACCCCACAGGCCCTTGTaGATTTCCACTAAAAAGCAACCTTTGTGCCATTTG +
Preference number: 3 (lower is better)
Translates to: FKDHLQAPHRPL*ISTKKQPLCHL
Trigger: CAAATGGCACAAAGGTTGCTTTTTAGTGGAAATTCACAAGGGCCTGTGGGGTGCCTGGAGGTGATCTTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR TCA 72 bp ACATTGTCACTAGCTATTATCATTTGCTGTGCTGTATaGAAGAGACTCGGCGCACCTGGGTGTAAACAGCAG +
Preference number: 3 (lower is better)
Translates to: TLSLAIIICCAV*KRLGAPGCKQQ
Trigger: CTGCTGTTTACACCCAGGTGCGCCGAGTCTCTTTCATACAGCACAGCAAATGATAATAGCTAGTGACAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR CCA 72 bp AGAGTGATTACAGGTTCATCGTTTCTAATCACACATTaGCAGTCATCTTTCCTTATGTTGCCCCGCAGCTCC +
Preference number: 3 (lower is better)
Translates to: RVITGSSFLITH*QSSFLMLPRSS
Trigger: GGAGCTGCGGGGCAACATAAGGAAAGATGACTGCCAATGTGTGATTAGAAACGATGAACCTGTAATCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564769.2
3UTR-3UTR CAA 90 bp CAGTTGTCCTCCCTGCATTTTCACGAGTGCACAGGAAACACATTGTCACTAGCTGACGACATCTTCTTTTaGGAACCATTTTATTTGTGG +
Preference number: 3 (lower is better)
Translates to: QLSSLHFHECTGNTLSLADDIFF*EPFYLW
Trigger: CCACAAATAAAATGGTTCCAAAAAGAAGATGTCGTC...AGCTAGTGACAATGTGTTTCCTGTGCACTCGTGAAAATGCAGGGAGGACAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564769.2
3UTR-3UTR CAA 90 bp GAGAAACAGACACTGATATGGGTGTTAGAAGAGCTCCACAGTCAAAACCTTCACAAAATAATAAAGATCTaGGGGCCGTCACACAACACT +
Preference number: 3 (lower is better)
Translates to: EKQTLIWVLEELHSQNLHKIIKI*GPSHNT
Trigger: AGTGTTGTGTGACGGCCCCAAGATCTTTATTATTTT...GTGAAGGTTTTGACTGTGGAGCTCTTCTAACACCCATATCAGTGTCTGTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR CCA 72 bp GATGACGACATCTTCTTTTTGGAACCATTTTATTTGTaGGTGGAAGCTAGAAGAAGAAAGACCTGCGCATTC +
Preference number: 3 (lower is better)
Translates to: DDDIFFLEPFYL*VEARRRKTCAF
Trigger: GAATGCGCAGGTCTTTCTTCTTCTAGCTTCCACCCACAAATAAAATGGTTCCAAAAAGAAGATGTCGTCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564769.2
3UTR-3UTR CAA 90 bp ACTTTTAATTTCCCAATAGCTCACCTTTCTCGCTTTTTCAGTCAACAAAGAAACTTGGAACCATTTTATTaGTGGGTGGAAGCTAGAAGA +
Preference number: 3 (lower is better)
Translates to: TFNFPIAHLSRFFSQQRNLEPFY*WVEARR
Trigger: TCTTCTAGCTTCCACCCACAAATAAAATGGTTCCAA...GTTTCTTTGTTGACTGAAAAAGCGAGAAAGGTGAGCTATTGGGAAATTAAAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564769.2
CDS-3UTR GCA 90 bp GCAGGCAGCTGGTGCGCACGGGGCGCCACTGGACGGCGGCCTGGTCTCTGCCCCGGCAGCTGTCCTGGCTaGACAGCGTGTCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: AGSWCARGATGRRPGLCPGSCPG*TACPPR
Trigger: CCTGGGAGGACACGCTGTGCAGCCAGGACAGCTGCC...GGGGCAGAGACCAGGCCGCCGTCCAGTGGCGCCCCGTGCGCACCAGCTGCCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp GCAGGCAGCTGGTGCGCACGGGGCGCCACTGGACGGCGGCCTGGTCTCTGCCCCACTGGGCAGAAAAACTaGCCAACCCAGCAGCACTCG +
Preference number: 4 (lower is better)
Translates to: AGSWCARGATGRRPGLCPTGQKN*PTQQHS
Trigger: CGAGTGCTGCTGGGTTGGGCAGTTTTTCTGCCCAGT...GGGGCAGAGACCAGGCCGCCGTCCAGTGGCGCCCCGTGCGCACCAGCTGCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp GCAGGCAGCTGGTGCGCACGGGGCGCCACTGGACGGCGGCCTGGTCTCTGCCCCTTTCTGAGCTCGTCTTaGACTCAGCCCCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: AGSWCARGATGRRPGLCPFLSSS*TQPLLL
Trigger: CAGAAGGAGGGGCTGAGTCCAAGACGAGCTCAGAAA...GGGGCAGAGACCAGGCCGCCGTCCAGTGGCGCCCCGTGCGCACCAGCTGCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp AGAGACTCGGCGCACCTGGGTGTAAACAGCAGGCAGCTGGTGCGCACGGGGCGCCTCTGCCAGGGTGAGTaGCGAGAGGCGCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: RDSAHLGVNSRQLVRTGRLCQGE*REAPDR
Trigger: CCTGTCTGGCGCCTCTCGCCACTCACCCTGGCAGAG...GCGCCCCGTGCGCACCAGCTGCCTGCTGTTTACACCCAGGTGCGCCGAGTCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp GGCGAGAGGCGCCAGACAGGACAGACAAGCCGGCGGAATCAGACCACACCTGCTCGGCGGCCTGGTCTCTaGCCCCAGAGCTCCACCAAC +
Preference number: 4 (lower is better)
Translates to: GERRQTGQTSRRNQTTPARRPGL*PQSSTN
Trigger: GTTGGTGGAGCTCTGGGGGCAGAGACCAGGCCGCCG...AGCAGGTGTGGTCTGATTCCGCCGGCTTGTCTGTCCTGTCTGGCGCCTCTCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp GCAGGCAGCTGGTGCGCACGGGGCGCCACTGGACGGCGGCCTGGTCTCTGCCCCCCACTATCTCATGGTTaGAAGGGCTGGTTCAACAGT +
Preference number: 4 (lower is better)
Translates to: AGSWCARGATGRRPGLCPPLSHG*KGWFNS
Trigger: ACTGTTGAACCAGCCCTTTCAACCATGAGATAGTGG...GGGGCAGAGACCAGGCCGCCGTCCAGTGGCGCCCCGTGCGCACCAGCTGCCTGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp AGAGACTCGGCGCACCTGGGTGTAAACAGCAGGCAGCTGGTGCGCACGGGGCGCACCTGCCAGTCACCCTaGGAAGGCCATAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: RDSAHLGVNSRQLVRTGRTCQSP*EGHSSD
Trigger: GTCACTGCTATGGCCTTCGCAGGGTGACTGGCAGGT...GCGCCCCGTGCGCACCAGCTGCCTGCTGTTTACACCCAGGTGCGCCGAGTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp GTGAGTGGCGAGAGGCGCCAGACAGGACAGACAAGCCGGCGGAATCAGACCACACTCAGCCCCTCCTTCTaGACCCGTGTCCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VSGERRQTGQTSRRNQTTLSPSF*TRVLRL
Trigger: CAGCCTGAGGACACGGGTGCAGAAGGAGGGGCTGAG...TGTGGTCTGATTCCGCCGGCTTGTCTGTCCTGTCTGGCGCCTCTCGCCACTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp CTGCTCTGCCAGGGTGAGTGGCGAGAGGCGCCAGACAGGACAGACAAGCCGGCGACAATGCAGATGGGGTaGCGAATGTCTGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LLCQGEWREAPDRTDKPATMQMG*RMSAGL
Trigger: GAGCCCTGCAGACATTCGCCACCCCATCTGCATTGT...CGCCGGCTTGTCTGTCCTGTCTGGCGCCTCTCGCCACTCACCCTGGCAGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp CTGCTCTGCCAGGGTGAGTGGCGAGAGGCGCCAGACAGGACAGACAAGCCGGCGCAGCCACAATGCAGATaGGGTGGCGAATGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LLCQGEWREAPDRTDKPAQPQCR*GGECLQ
Trigger: CTGCAGACATTCGCCACCCCATCTGCATTGTGGCTG...CGCCGGCTTGTCTGTCCTGTCTGGCGCCTCTCGCCACTCACCCTGGCAGAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp AGGCGCCAGACAGGACAGACAAGCCGGCGGAATCAGACCACACCTGCTGTTTCTGCAGCTGGTCCCTTGTaGCGAGCCCCGTCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: RRQTGQTSRRNQTTPAVSAAGPL*RAPSCL
Trigger: AAGGCAGGACGGGGCTCGTCACAAGGGACCAGCTGC...AGAAACAGCAGGTGTGGTCTGATTCCGCCGGCTTGTCTGTCCTGTCTGGCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637289.1
CDS-3UTR GCA 90 bp CTGCTCTGCCAGGGTGAGTGGCGAGAGGCGCCAGACAGGACAGACAAGCCGGCGTTTCAGAGGCGGCTGTaGAGTTCTGCTAATGAAGGC +
Preference number: 4 (lower is better)
Translates to: LLCQGEWREAPDRTDKPAFQRRL*SSANEG
Trigger: GCCTTCATTAGCAGAACTGCACAGCCGCCTCTGAAA...CGCCGGCTTGTCTGTCCTGTCTGGCGCCTCTCGCCACTCACCCTGGCAGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp GGCGAGAGGCGCCAGACAGGACAGACAAGCCGGCGGAATCAGACCACACCTGCTGTGCTGCAGCCACAATaGAGATGGGGTGGCGAATGT +
Preference number: 4 (lower is better)
Translates to: GERRQTGQTSRRNQTTPAVLQPQ*RWGGEC
Trigger: ACATTCGCCACCCCATCTGCATTGTGGCTGCAGCAC...AGCAGGTGTGGTCTGATTCCGCCGGCTTGTCTGTCCTGTCTGGCGCCTCTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp AGGCGCCAGACAGGACAGACAAGCCGGCGGAATCAGACCACACCTGCTGTTTCTGGGAGATGCAGCAGCTaGTCCCTTGTGACGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RRQTGQTSRRNQTTPAVSGRCSS*SLVTSP
Trigger: GGGGCTCGTCACAAGGGACCAGCTGCTGCATCTCCC...AGAAACAGCAGGTGTGGTCTGATTCCGCCGGCTTGTCTGTCCTGTCTGGCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637289.1
CDS-3UTR CCA 90 bp GCAGGGCTCACGACATGTAGGCATTCAAAGATCACCTCCAGGCACCCCACAGGCGCCATAGCAGTGACCTaGGCACACTCCCGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: AGLTTCRHSKITSRHPTGAIAVT*AHSRQL
Trigger: CAGCTGCCGGGAGTGTGCCCAGGTCACTGCTATGGC...GCCTGTGGGGTGCCTGGAGGTGATCTTTGAATGCCTACATGTCGTGAGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp CTTTCACTCTCACTGTCGTCATCCTCTGAAGTGCTGCTACTGTCTTCAACCACCCGCACGGGGCGCCACTaGACGGCGGCCTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LSLSLSSSSEVLLLSSTTRTGRH*TAAWSL
Trigger: CAGAGACCAGGCCGCCGTCCAGTGGCGCCCCGTGCG...GGTGGTTGAAGACAGTAGCAGCACTTCAGAGGATGACGACAGTGAGAGTGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp GGCGAGAGGCGCCAGACAGGACAGACAAGCCGGCGGAATCAGACCACACCTGCTACTGTCGTCATCCTCTaGAGTGCTGCTACTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GERRQTGQTSRRNQTTPATVVIL*SAATVF
Trigger: GAAGACAGTAGCAGCACTTCAGAGGATGACGACAGT...AGCAGGTGTGGTCTGATTCCGCCGGCTTGTCTGTCCTGTCTGGCGCCTCTCGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp GCAGCCACAATGCAGATGGGGTGGCGAATGTCTGCAGGGCTCACGACATGTAGGCTCTGGGTGTGGCCATaGCTACATACACTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: AATMQMGWRMSAGLTTCRLWVWP*LHTLLP
Trigger: GGGGAGGAGTGTATGTAGTCATGGCCACACCCAGAG...CCTACATGTCGTGAGCCCTGCAGACATTCGCCACCCCATCTGCATTGTGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp CAGCTTCACCCCGGAAAGGCCTGGGTCTTACTGAGCAATCCAATTTCTATCCCTCACTGGACGGCGGCCTaGTCTCTGCCCCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: QLHPGKAWVLLSNPISIPHWTAA*SLPPEL
Trigger: GAGCTCTGGGGGCAGAGACCAGGCCGCCGTCCAGTG...AGGGATAGAAATTGGATTGCTCAGTAAGACCCAGGCCTTTCCGGGGTGAAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp AAGTTCACCTCTAGTTCAAGCGGTGGCTTCTGCTGGGACATACATAAGCCTGGGCACTGGACGGCGGCCTaGTCTCTGCCCCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: KFTSSSSGGFCWDIHKPGHWTAA*SLPPEL
Trigger: GAGCTCTGGGGGCAGAGACCAGGCCGCCGTCCAGTG...CCCAGGCTTATGTATGTCCCAGCAGAAGCCACCGCTTGAACTAGAGGTGAACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp AGAGACTCGGCGCACCTGGGTGTAAACAGCAGGCAGCTGGTGCGCACGGGGCGCCATTTTATTTGTGGGTaGAAGCTTTTCAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: RDSAHLGVNSRQLVRTGRHFICG*KLFRGG
Trigger: GCCGCCTCTGAAAAGCTTCCACCCACAAATAAAATG...GCGCCCCGTGCGCACCAGCTGCCTGCTGTTTACACCCAGGTGCGCCGAGTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637289.1
CDS-3UTR TCA 90 bp AAGTTCACCTCTAGTTCAAGCGGTGGCTTCTGCTGGGACATACATAAGCCTGGGTCTGCTCTGCCAGGGTaGGTGGCGAGAGGCGCCAGA +
Preference number: 4 (lower is better)
Translates to: KFTSSSSGGFCWDIHKPGSALPG*VARGAR
Trigger: TCTGGCGCCTCTCGCCACTCACCCTGGCAGAGCAGA...CCCAGGCTTATGTATGTCCCAGCAGAAGCCACCGCTTGAACTAGAGGTGAACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp TCACTCTCACTGTCGTCATCCTCTGAAGTGCTGCTACTGTCTTCAACCACCTCTACAGCAGGCAGCTGGTaGGCACGGGGCGCCACTGGA +
Preference number: 4 (lower is better)
Translates to: SLSLSSSSEVLLLSSTTSTAGSW*ARGATG
Trigger: TCCAGTGGCGCCCCGTGCGCACCAGCTGCCTGCTGT...AGAGGTGGTTGAAGACAGTAGCAGCACTTCAGAGGATGACGACAGTGAGAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp CAGCCACAATGCAGATGGGGTGGCGAATGTCTGCAGGGCTCACGACATGTAGGCACCCTCGGCGGGGTCTaGCTTAGGCTTTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: QPQCRWGGECLQGSRHVGTLGGV*LRLSSQ
Trigger: TTGTGAAGAAAGCCTAAGCCAGACCCCGCCGAGGGT...GCCTACATGTCGTGAGCCCTGCAGACATTCGCCACCCCATCTGCATTGTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp GCAGGGCTCACGACATGTAGGCATTCAAAGATCACCTCCAGGCACCCCACAGGCCACCCCGGAAAGGCCTaGGTCTTACTGAGCAATCCA +
Preference number: 4 (lower is better)
Translates to: AGLTTCRHSKITSRHPTGHPGKA*VLLSNP
Trigger: TGGATTGCTCAGTAAGACCCAGGCCTTTCCGGGGTG...GCCTGTGGGGTGCCTGGAGGTGATCTTTGAATGCCTACATGTCGTGAGCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp GCAGGGCTCACGACATGTAGGCATTCAAAGATCACCTCCAGGCACCCCACAGGCAGGCTTCTGGTTTTCTaGGCTCGTCTTGGACTCAGC +
Preference number: 4 (lower is better)
Translates to: AGLTTCRHSKITSRHPTGRLLVF*ARLGLS
Trigger: GCTGAGTCCAAGACGAGCTCAGAAAACCAGAAGCCT...GCCTGTGGGGTGCCTGGAGGTGATCTTTGAATGCCTACATGTCGTGAGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp AAGACCTGCGCATTCATTGATCTTATTAACTGGGTAAGGGACGCCGACTCCTCCTCTGCTCTGCCAGGGTaGGTGGCGAGAGGCGCCAGA +
Preference number: 4 (lower is better)
Translates to: KTCAFIDLINWVRDADSSSALPG*VARGAR
Trigger: TCTGGCGCCTCTCGCCACTCACCCTGGCAGAGCAGA...GGAGGAGTCGGCGTCCCTTACCCAGTTAATAAGATCAATGAATGCGCAGGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564769.2
CDS-3UTR GCA 90 bp CGCTTTTTCAGTCAACAAAGAAACCCAAAGCACAAAAGCCAGCCTCTGGGTGTGCGGCGGCCTGGTCTCTaGCCCCAGAGCTCCACCAAC +
Preference number: 4 (lower is better)
Translates to: RFFSQQRNPKHKSQPLGVRRPGL*PQSSTN
Trigger: GTTGGTGGAGCTCTGGGGGCAGAGACCAGGCCGCCG...CACACCCAGAGGCTGGCTTTTGTGCTTTGGGTTTCTTTGTTGACTGAAAAAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp CAGTTGTCCTCCCTGCATTTTCACGAGTGCACAGGAAACACATTGTCACTAGCTACAGCAGGCAGCTGGTaGGCACGGGGCGCCACTGGA +
Preference number: 4 (lower is better)
Translates to: QLSSLHFHECTGNTLSLATAGSW*ARGATG
Trigger: TCCAGTGGCGCCCCGTGCGCACCAGCTGCCTGCTGT...AGCTAGTGACAATGTGTTTCCTGTGCACTCGTGAAAATGCAGGGAGGACAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp TCACTCTCACTGTCGTCATCCTCTGAAGTGCTGCTACTGTCTTCAACCACCTCTCTCAGCCCCTCCTTCTaGACCCGTGTCCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SLSLSSSSEVLLLSSTTSLSPSF*TRVLRL
Trigger: CAGCCTGAGGACACGGGTGCAGAAGGAGGGGCTGAG...AGAGGTGGTTGAAGACAGTAGCAGCACTTCAGAGGATGACGACAGTGAGAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp CTGCTCTGCCAGGGTGAGTGGCGAGAGGCGCCAGACAGGACAGACAAGCCGGCGAAACAAGACACAGAGTaGACAGGACTTTTAATTTCC +
Preference number: 4 (lower is better)
Translates to: LLCQGEWREAPDRTDKPAKQDTE*TGLLIS
Trigger: GGAAATTAAAAGTCCTGTGCACTCTGTGTCTTGTTT...CGCCGGCTTGTCTGTCCTGTCTGGCGCCTCTCGCCACTCACCCTGGCAGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp GCAGGGCTCACGACATGTAGGCATTCAAAGATCACCTCCAGGCACCCCACAGGCTCAAGCGGTGGCTTCTaGTGGGACATACATAAGCCT +
Preference number: 4 (lower is better)
Translates to: AGLTTCRHSKITSRHPTGSSGGF*WDIHKP
Trigger: AGGCTTATGTATGTCCCAGCAGAAGCCACCGCTTGA...GCCTGTGGGGTGCCTGGAGGTGATCTTTGAATGCCTACATGTCGTGAGCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp CAGCCACAATGCAGATGGGGTGGCGAATGTCTGCAGGGCTCACGACATGTAGGCAGGGCAGCAGCCACATaGAGAGAAACAGACACTGAT +
Preference number: 4 (lower is better)
Translates to: QPQCRWGGECLQGSRHVGRAAAT*RETDTD
Trigger: ATCAGTGTCTGTTTCTCTGCATGTGGCTGCTGCCCT...GCCTACATGTCGTGAGCCCTGCAGACATTCGCCACCCCATCTGCATTGTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp GGCGAGAGGCGCCAGACAGGACAGACAAGCCGGCGGAATCAGACCACACCTGCTCATAAGCCTGGGCATTaGCGCTTTCTGATACAAAAA +
Preference number: 4 (lower is better)
Translates to: GERRQTGQTSRRNQTTPAHKPGH*RFLIQK
Trigger: TTTTTGTATCAGAAAGCGCCAATGCCCAGGCTTATG...AGCAGGTGTGGTCTGATTCCGCCGGCTTGTCTGTCCTGTCTGGCGCCTCTCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp CACCTTCTCTTTCACTCTCACTGTCGTCATCCTCTGAAGTGCTGCTACTGTCTTTCCCGGCAGCTGTCCTaGCTGCACAGCGTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: HLLFHSHCRHPLKCCYCLSRQLS*LHSVSS
Trigger: GGAGGACACGCTGTGCAGCCAGGACAGCTGCCGGGA...AAGACAGTAGCAGCACTTCAGAGGATGACGACAGTGAGAGTGAAAGAGAAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp CAATGCAGATGGGGTGGCGAATGTCTGCAGGGCTCACGACATGTAGGCATTCAAGGCAGGAGAATTGCTTaGGCCTGTGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: QCRWGGECLQGSRHVGIQGRRIA*ACEAEV
Trigger: AACCTCTGCCTCACAGGCTCAAGCAATTCTCCTGCC...TTGAATGCCTACATGTCGTGAGCCCTGCAGACATTCGCCACCCCATCTGCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp GCAGCCACAATGCAGATGGGGTGGCGAATGTCTGCAGGGCTCACGACATGTAGGAGGCCTGGGTCTTACTaGGCAATCCAATTTCTATCC +
Preference number: 4 (lower is better)
Translates to: AATMQMGWRMSAGLTTCRRPGSY*AIQFLS
Trigger: GGATAGAAATTGGATTGCTCAGTAAGACCCAGGCCT...CCTACATGTCGTGAGCCCTGCAGACATTCGCCACCCCATCTGCATTGTGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp CACCTTCTCTTTCACTCTCACTGTCGTCATCCTCTGAAGTGCTGCTACTGTCTTGCAAGCAGCATCTTCTaGTGGAGGCGTCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: HLLFHSHCRHPLKCCYCLASSIF*WRRPLP
Trigger: GGGCAGGGGACGCCTCCAGCAGAAGATGCTGCTTGC...AAGACAGTAGCAGCACTTCAGAGGATGACGACAGTGAGAGTGAAAGAGAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637289.1
CDS-3UTR GCA 90 bp CAGCTTCACCCCGGAAAGGCCTGGGTCTTACTGAGCAATCCAATTTCTATCCCTGATGCATGTCTGCTCTaGCAGGGTGAGTGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: QLHPGKAWVLLSNPISIPDACLL*QGEWRE
Trigger: CTCTCGCCACTCACCCTGGCAGAGCAGACATGCATC...AGGGATAGAAATTGGATTGCTCAGTAAGACCCAGGCCTTTCCGGGGTGAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp TATGTTGCCCCGCAGCTCCAGATCAGCCAGGTAAAATTTGTCTCCCACCCAAGCACTGGGCAGAAAAACTaGCCAACCCAGCAGCACTCG +
Preference number: 4 (lower is better)
Translates to: YVAPQLQISQVKFVSHPSTGQKN*PTQQHS
Trigger: CGAGTGCTGCTGGGTTGGGCAGTTTTTCTGCCCAGT...GCTTGGGTGGGAGACAAATTTTACCTGGCTGATCTGGAGCTGCGGGGCAACATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564769.2
CDS-3UTR CCA 90 bp GTGAGTGGCGAGAGGCGCCAGACAGGACAGACAAGCCGGCGGAATCAGACCACACATAAGCCTGGGCATTaGCGCTTTCTGATACAAAAA +
Preference number: 4 (lower is better)
Translates to: VSGERRQTGQTSRRNQTTHKPGH*RFLIQK
Trigger: TTTTTGTATCAGAAAGCGCCAATGCCCAGGCTTATG...TGTGGTCTGATTCCGCCGGCTTGTCTGTCCTGTCTGGCGCCTCTCGCCACTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp GCAGCCACAATGCAGATGGGGTGGCGAATGTCTGCAGGGCTCACGACATGTAGGTCTCTTTGGCCAGAGTaGTTACAGGTTCATCGTTTC +
Preference number: 4 (lower is better)
Translates to: AATMQMGWRMSAGLTTCRSLWPE*LQVHRF
Trigger: GAAACGATGAACCTGTAATCACTCTGGCCAAAGAGA...CCTACATGTCGTGAGCCCTGCAGACATTCGCCACCCCATCTGCATTGTGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp TTCAGTCAACAAAGAAACCCAAAGCACAAAAGCCAGCCTCTGGGTGTGGCCATGCTCTGGGTGTGGCCATaGCTACATACACTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: FSQQRNPKHKSQPLGVAMLWVWP*LHTLLP
Trigger: GGGGAGGAGTGTATGTAGTCATGGCCACACCCAGAG...CATGGCCACACCCAGAGGCTGGCTTTTGTGCTTTGGGTTTCTTTGTTGACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp AAGATCTTGGGGCCGTCACACAACACTCATGTTCTATCCAAATTCTTTTCCATTTCGGCGGGCGCTCCCTaGGACAAGGCCAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: KILGPSHNTHVLSKFFSISAGAP*DKARPH
Trigger: GTGTGGCCTGGCCTTGTCTCAGGGAGCGCCCGCCGA...AATGGAAAAGAATTTGGATAGAACATGAGTGTTGTGTGACGGCCCCAAGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp TCACTCTCACTGTCGTCATCCTCTGAAGTGCTGCTACTGTCTTCAACCACCTCTTCAGGCTGGGGGCTCTaGAGGCAAGCAGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: SLSLSSSSEVLLLSSTTSSGWGL*RQAASS
Trigger: AGAAGATGCTGCTTGCCTGCAGAGCCCCCAGCCTGA...AGAGGTGGTTGAAGACAGTAGCAGCACTTCAGAGGATGACGACAGTGAGAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp TTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCGCGCCCGAGGGCAGATaGGCCCCCTCGCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: FLNCRSHGNIHFCSTSSSAPEGR*APSPWK
Trigger: CTTCCAGGGCGAGGGGGCCCATCTGCCCTCGGGCGC...GCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp GAGAAACAGACACTGATATGGGTGTTAGAAGAGCTCCACAGTCAAAACCTTCACTCCCGGCAGCTGTCCTaGCTGCACAGCGTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: EKQTLIWVLEELHSQNLHSRQLS*LHSVSS
Trigger: GGAGGACACGCTGTGCAGCCAGGACAGCTGCCGGGA...GTGAAGGTTTTGACTGTGGAGCTCTTCTAACACCCATATCAGTGTCTGTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR CAA 72 bp AGCCAGAGTGTGATCCAGACCTGCTCACAGGACAGCTaGATGACAAAGTTCACCTCTAGTTCAAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: SQSVIQTCSQDS*MTKFTSSSSGG
Trigger: GCCACCGCTTGAACTAGAGGTGAACTTTGTCATCAAGCTGTCCTGTGAGCAGGTCTGGATCACACTCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp CTCCAGACAGTGCATTTCATCACCCAGATGCATGTCTGCTCTGCCAGGGTGAGTGTGTCCACCCTCCTTTaGTGGTCTTATCATCAGCCT +
Preference number: 4 (lower is better)
Translates to: LQTVHFITQMHVCSARVSVSTLL*WSYHQP
Trigger: AGGCTGATGATAAGACCATCAAAGGAGGGTGGACAC...ACTCACCCTGGCAGAGCAGACATGCATCTGGGTGATGAAATGCACTGTCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp AAGTTCACCTCTAGTTCAAGCGGTGGCTTCTGCTGGGACATACATAAGCCTGGGGGCCAGGCCACACAATaGGGGGATGTCTCATTTTAC +
Preference number: 4 (lower is better)
Translates to: KFTSSSSGGFCWDIHKPGGQATQ*GDVSFY
Trigger: GTAAAATGAGACATCCCCTCATTGTGTGGCCTGGCC...CCCAGGCTTATGTATGTCCCAGCAGAAGCCACCGCTTGAACTAGAGGTGAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp AAGTTCACCTCTAGTTCAAGCGGTGGCTTCTGCTGGGACATACATAAGCCTGGGCTTCATGGGCTGATTTaGTACCTGCCAGTCACCCTG +
Preference number: 4 (lower is better)
Translates to: KFTSSSSGGFCWDIHKPGLHGLI*YLPVTL
Trigger: CAGGGTGACTGGCAGGTATCAAATCAGCCCATGAAG...CCCAGGCTTATGTATGTCCCAGCAGAAGCCACCGCTTGAACTAGAGGTGAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp CTCCAGACAGTGCATTTCATCACCCAGATGCATGTCTGCTCTGCCAGGGTGAGTAACCTTTGTGCCATTTaGTCAGGACTCTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LQTVHFITQMHVCSARVSNLCAI*SGLCRS
Trigger: GGACCTGCAGAGTCCTGAGCAAATGGCACAAAGGTT...ACTCACCCTGGCAGAGCAGACATGCATCTGGGTGATGAAATGCACTGTCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp CAATGCAGATGGGGTGGCGAATGTCTGCAGGGCTCACGACATGTAGGCATTCAAAGTGTGATCCAGACCTaGTCACAGGACAGCTTGATG +
Preference number: 4 (lower is better)
Translates to: QCRWGGECLQGSRHVGIQSVIQT*SQDSLM
Trigger: CATCAAGCTGTCCTGTGAGCAGGTCTGGATCACACT...TTGAATGCCTACATGTCGTGAGCCCTGCAGACATTCGCCACCCCATCTGCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp TGCAGATGGGGTGGCGAATGTCTGCAGGGCTCACGACATGTAGGCATTCAAAGAAGGGCAGCAGCCACATaGAGAGAAACAGACACTGAT +
Preference number: 4 (lower is better)
Translates to: CRWGGECLQGSRHVGIQRRAAAT*RETDTD
Trigger: ATCAGTGTCTGTTTCTCTGCATGTGGCTGCTGCCCT...TCTTTGAATGCCTACATGTCGTGAGCCCTGCAGACATTCGCCACCCCATCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp CTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCTTCAGCACCAGGAGCTaGAGCATCCTCCTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: LNCRSHGNIHFCSTSSSRFSTRS*SILLAP
Trigger: GGGCGCCAGGAGGATGCTCCAGCTCCTGGTGCTGAA...GCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp GCAGGGCTCACGACATGTAGGCATTCAAAGATCACCTCCAGGCACCCCACAGGCAAAGTTTCAGGCTTCTaGTTTTCTGAGCTCGTCTTG +
Preference number: 4 (lower is better)
Translates to: AGLTTCRHSKITSRHPTGKVSGF*FSELVL
Trigger: CAAGACGAGCTCAGAAAACCAGAAGCCTGAAACTTT...GCCTGTGGGGTGCCTGGAGGTGATCTTTGAATGCCTACATGTCGTGAGCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp AGGCGCCAGACAGGACAGACAAGCCGGCGGAATCAGACCACACCTGCTGTTTCTAATCCCACTATCTCATaGTTGAAAGGGCTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: RRQTGQTSRRNQTTPAVSNPTIS*LKGLVQ
Trigger: TTGAACCAGCCCTTTCAACCATGAGATAGTGGGATT...AGAAACAGCAGGTGTGGTCTGATTCCGCCGGCTTGTCTGTCCTGTCTGGCGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp CAGCTCCAGATCAGCCAGGTAAAATTTGTCTCCCACCCAAGCACTGAAAACGACACAATGCAGATGGGGTaGCGAATGTCTGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: QLQISQVKFVSHPSTENDTMQMG*RMSAGL
Trigger: GAGCCCTGCAGACATTCGCCACCCCATCTGCATTGT...GTCGTTTTCAGTGCTTGGGTGGGAGACAAATTTTACCTGGCTGATCTGGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564769.2
CDS-3UTR TCA 90 bp TTTGCTGTGCTGTATGAAAGAGACTCGGCGCACCTGGGTGTAAACAGCAGGCAGTCTTCCTTCATGGGCTaGTTTGATACCTGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: FAVLYERDSAHLGVNSRQSSFMG*FDTCQS
Trigger: TGACTGGCAGGTATCAAATCAGCCCATGAAGGAAGA...CTGCCTGCTGTTTACACCCAGGTGCGCCGAGTCTCTTTCATACAGCACAGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp CTCCAGACAGTGCATTTCATCACCCAGATGCATGTCTGCTCTGCCAGGGTGAGTCATCCTCTGAAGTGCTaGTACTGTCTTCAACCACCT +
Preference number: 4 (lower is better)
Translates to: LQTVHFITQMHVCSARVSHPLKC*YCLQPP
Trigger: AGGTGGTTGAAGACAGTAGCAGCACTTCAGAGGATG...ACTCACCCTGGCAGAGCAGACATGCATCTGGGTGATGAAATGCACTGTCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp AAGATCTTGGGGCCGTCACACAACACTCATGTTCTATCCAAATTCTTTTCCATTGGCAGCTGTCCTGGCTaGACAGCGTGTCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: KILGPSHNTHVLSKFFSIGSCPG*TACPPR
Trigger: CCTGGGAGGACACGCTGTGCAGCCAGGACAGCTGCC...AATGGAAAAGAATTTGGATAGAACATGAGTGTTGTGTGACGGCCCCAAGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp CAGTTGTCCTCCCTGCATTTTCACGAGTGCACAGGAAACACATTGTCACTAGCTGCAGGGGTTAACACCTaGCTCTCTACAGGAACCCTG +
Preference number: 4 (lower is better)
Translates to: QLSSLHFHECTGNTLSLAAGVNT*LSTGTL
Trigger: CAGGGTTCCTGTAGAGAGCCAGGTGTTAACCCCTGC...AGCTAGTGACAATGTGTTTCCTGTGCACTCGTGAAAATGCAGGGAGGACAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564769.2
CDS-3UTR CCA 90 bp CAGTTGTCCTCCCTGCATTTTCACGAGTGCACAGGAAACACATTGTCACTAGCTCTCCTCCATGCCGAGTaGACGTACCTTTTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: QLSSLHFHECTGNTLSLALLHAE*TYLFRG
Trigger: GCCTCTGAAAAGGTACGTCCACTCGGCATGGAGGAG...AGCTAGTGACAATGTGTTTCCTGTGCACTCGTGAAAATGCAGGGAGGACAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564769.2
CDS-3UTR CCA 90 bp CGCTTTTTCAGTCAACAAAGAAACCCAAAGCACAAAAGCCAGCCTCTGGGTGTGCAGCCACAATGCAGATaGGGTGGCGAATGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: RFFSQQRNPKHKSQPLGVQPQCR*GGECLQ
Trigger: CTGCAGACATTCGCCACCCCATCTGCATTGTGGCTG...CACACCCAGAGGCTGGCTTTTGTGCTTTGGGTTTCTTTGTTGACTGAAAAAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp CGCTTTTTCAGTCAACAAAGAAACCCAAAGCACAAAAGCCAGCCTCTGGGTGTGAGCGGTGGCTTCTGCTaGGACATACATAAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RFFSQQRNPKHKSQPLGVSGGFC*DIHKPG
Trigger: CCCAGGCTTATGTATGTCCCAGCAGAAGCCACCGCT...CACACCCAGAGGCTGGCTTTTGTGCTTTGGGTTTCTTTGTTGACTGAAAAAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp CGCTTTTTCAGTCAACAAAGAAACCCAAAGCACAAAAGCCAGCCTCTGGGTGTGCCCCATCAGAGCCACTaGGCAGAAAAACTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: RFFSQQRNPKHKSQPLGVPHQSH*AEKLPN
Trigger: GTTGGGCAGTTTTTCTGCCCAGTGGCTCTGATGGGG...CACACCCAGAGGCTGGCTTTTGTGCTTTGGGTTTCTTTGTTGACTGAAAAAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp ACTTTTAATTTCCCAATAGCTCACCTTTCTCGCTTTTTCAGTCAACAAAGAAACCGCACGGGGCGCCACTaGACGGCGGCCTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: TFNFPIAHLSRFFSQQRNRTGRH*TAAWSL
Trigger: CAGAGACCAGGCCGCCGTCCAGTGGCGCCCCGTGCG...GTTTCTTTGTTGACTGAAAAAGCGAGAAAGGTGAGCTATTGGGAAATTAAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp AACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCTCTCTGTGGCTGTTGGCCTaGGGTCACCGACAATACCCT +
Preference number: 4 (lower is better)
Translates to: NCRSHGNIHFCSTSSSRSLWLLA*GHRQYP
Trigger: AGGGTATTGTCGGTGACCTCAGGCCAACAGCCACAG...AGAGCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR TCA 90 bp AACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCTCTACCCAGGGCACACGATaGCTGCGAGAGGTCCATTTC +
Preference number: 4 (lower is better)
Translates to: NCRSHGNIHFCSTSSSRSTQGTR*LREVHF
Trigger: GAAATGGACCTCTCGCAGTCATCGTGTGCCCTGGGT...AGAGCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR TCA 90 bp CCAGCAAAAACACCAGAACTTTCTACTTCCCAAGAGCCTGCCCAATTTAGCTACTGGGGTTCCTCTGTCTaGGTAGGTGACACCATGCCT +
Preference number: 4 (lower is better)
Translates to: PAKTPELSTSQEPAQFSYWGSSV*VGDTMP
Trigger: AGGCATGGTGTCACCTACTCAGACAGAGGAACCCCA...GTAGCTAAATTGGGCAGGCTCTTGGGAAGTAGAAAGTTCTGGTGTTTTTGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564769.2
CDS-3UTR TCA 90 bp CTTTCACTCTCACTGTCGTCATCCTCTGAAGTGCTGCTACTGTCTTCAACCACCACTGTCGTCATCCTCTaGAGTGCTGCTACTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LSLSLSSSSEVLLLSSTTTVVIL*SAATVF
Trigger: GAAGACAGTAGCAGCACTTCAGAGGATGACGACAGT...GGTGGTTGAAGACAGTAGCAGCACTTCAGAGGATGACGACAGTGAGAGTGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp CAGCTTCACCCCGGAAAGGCCTGGGTCTTACTGAGCAATCCAATTTCTATCCCTCCACTATCTCATGGTTaGAAGGGCTGGTTCAACAGT +
Preference number: 4 (lower is better)
Translates to: QLHPGKAWVLLSNPISIPPLSHG*KGWFNS
Trigger: ACTGTTGAACCAGCCCTTTCAACCATGAGATAGTGG...AGGGATAGAAATTGGATTGCTCAGTAAGACCCAGGCCTTTCCGGGGTGAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp AAGACCTGCGCATTCATTGATCTTATTAACTGGGTAAGGGACGCCGACTCCTCCATTTGCTGTGCTGTATaGAAGAGACTCGGCGCACCT +
Preference number: 4 (lower is better)
Translates to: KTCAFIDLINWVRDADSSICCAV*KRLGAP
Trigger: AGGTGCGCCGAGTCTCTTTCATACAGCACAGCAAAT...GGAGGAGTCGGCGTCCCTTACCCAGTTAATAAGATCAATGAATGCGCAGGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564769.2
CDS-3UTR GCA 90 bp TTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCAAGCAGCATCTTCTaGTGGAGGCGTCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: FLTVGHMAISIFVQHLPAASSIF*WRRPLP
Trigger: GGGCAGGGGACGCCTCCAGCAGAAGATGCTGCTTGC...GGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000637289.1
ENST00000647536.1
CDS-3UTR GCA 90 bp AACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCTCTGCAAGCAGCATCTTCTaGTGGAGGCGTCCTAGACGG +
Preference number: 4 (lower is better)
Translates to: NCRSHGNIHFCSTSSSRSASSIF*WRRPRR
Trigger: CCGTCTAGGACGCCTCCAGCAGAAGATGCTGCTTGC...AGAGCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564769.2
CDS-3UTR GCA 90 bp CCAGCAAAAACACCAGAACTTTCTACTTCCCAAGAGCCTGCCCAATTTAGCTACACGCCGACTCCTCCATaGCGAGTGGACGTACCTTTT +
Preference number: 4 (lower is better)
Translates to: PAKTPELSTSQEPAQFSYTPTPP*RVDVPF
Trigger: AAAAGGTACGTCCACTCGGCATGGAGGAGTCGGCGT...GTAGCTAAATTGGGCAGGCTCTTGGGAAGTAGAAAGTTCTGGTGTTTTTGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564769.2
CDS-3UTR GCA 90 bp CAGCTCCAGATCAGCCAGGTAAAATTTGTCTCCCACCCAAGCACTGAAAACGACAACCTTTGTGCCATTTaGTCAGGACTCTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: QLQISQVKFVSHPSTENDNLCAI*SGLCRS
Trigger: GGACCTGCAGAGTCCTGAGCAAATGGCACAAAGGTT...GTCGTTTTCAGTGCTTGGGTGGGAGACAAATTTTACCTGGCTGATCTGGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564769.2
CDS-3UTR GCA 90 bp ATTGTCACTAGCTATTATCATTTGCTGTGCTGTATGAAAGAGACTCGGCGCACCACCTGCCAGTCACCCTaGGAAGGCCATAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: IVTSYYHLLCCMKETRRTTCQSP*EGHSSD
Trigger: GTCACTGCTATGGCCTTCGCAGGGTGACTGGCAGGT...GGTGCGCCGAGTCTCTTTCATACAGCACAGCAAATGATAATAGCTAGTGACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp AGGCGCCAGACAGGACAGACAAGCCGGCGGAATCAGACCACACCTGCTGTTTCTTATTATCATTTGCTGTaGTGTATGAAAGAGACTCGG +
Preference number: 4 (lower is better)
Translates to: RRQTGQTSRRNQTTPAVSYYHLL*CMKETR
Trigger: CCGAGTCTCTTTCATACAGCACAGCAAATGATAATA...AGAAACAGCAGGTGTGGTCTGATTCCGCCGGCTTGTCTGTCCTGTCTGGCGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp TTCAGTCAACAAAGAAACCCAAAGCACAAAAGCCAGCCTCTGGGTGTGGCCATGTGCAGTTGTCCTCCCTaGATTTTCACGAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: FSQQRNPKHKSQPLGVAMCSCPP*IFTSAQ
Trigger: CTGTGCACTCGTGAAAATGCAGGGAGGACAACTGCA...CATGGCCACACCCAGAGGCTGGCTTTTGTGCTTTGGGTTTCTTTGTTGACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp GTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTGCTGGAGCATCCTCCTaGCGCCCGAGGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: VMTDCFLNCRSHGNIHFCAGASS*RPRADG
Trigger: CCCATCTGCCCTCGGGCGCCAGGAGGATGCTCCAGC...ACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp ACTAGCTATTATCATTTGCTGTGCTGTATGAAAGAGACTCGGCGCACCTGGGTGTGCGGGGGAAGTGTGTaGAAATGTTCTGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: TSYYHLLCCMKETRRTWVCGGSV*KCSGRC
Trigger: GCATCTCCCAGAACATTTCCACACACTTCCCCCGCA...CACCCAGGTGCGCCGAGTCTCTTTCATACAGCACAGCAAATGATAATAGCTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637289.1
CDS-3UTR CCA 90 bp TGCAGATGGGGTGGCGAATGTCTGCAGGGCTCACGACATGTAGGCATTCAAAGACAATGCCCATGCCCATaGACAAAATTTCAGCTCGAA +
Preference number: 4 (lower is better)
Translates to: CRWGGECLQGSRHVGIQRQCPCP*TKFQLE
Trigger: TTCGAGCTGAAATTTTGTCCATGGGCATGGGCATTG...TCTTTGAATGCCTACATGTCGTGAGCCCTGCAGACATTCGCCACCCCATCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637289.1
CDS-3UTR CCA 90 bp AGGCGCCAGACAGGACAGACAAGCCGGCGGAATCAGACCACACCTGCTGTTTCTGAACCATTTTATTTGTaGGTGGAAGCTAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: RRQTGQTSRRNQTTPAVSEPFYL*VEARRR
Trigger: TCTTCTTCTAGCTTCCACCCACAAATAAAATGGTTC...AGAAACAGCAGGTGTGGTCTGATTCCGCCGGCTTGTCTGTCCTGTCTGGCGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564769.2
CDS-3UTR CCA 90 bp GTGCACAGGAAACACATTGTCACTAGCTATTATCATTTGCTGTGCTGTATGAAACTCTGCCAGGGTGAGTaGCGAGAGGCGCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: VHRKHIVTSYYHLLCCMKLCQGE*REAPDR
Trigger: CCTGTCTGGCGCCTCTCGCCACTCACCCTGGCAGAG...TTTCATACAGCACAGCAAATGATAATAGCTAGTGACAATGTGTTTCCTGTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCCTGTGGCTGTTGGCCTaGGGTCACCGACAATACCCT +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPILWLLA*GHRQYP
Trigger: AGGGTATTGTCGGTGACCTCAGGCCAACAGCCACAG...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR TCA 90 bp TTGGTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTGCAGCTGGTCCCTTGTaGCGAGCCCCGTCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LVMTDCFLNCRSHGNIHFAAGPL*RAPSCL
Trigger: AAGGCAGGACGGGGCTCGTCACAAGGGACCAGCTGC...AAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000637289.1
ENST00000647536.1
CDS-3UTR TCA 90 bp AAGTTCACCTCTAGTTCAAGCGGTGGCTTCTGCTGGGACATACATAAGCCTGGGTCTCTTTGGCCAGAGTaGTTACAGGTTCATCGTTTC +
Preference number: 4 (lower is better)
Translates to: KFTSSSSGGFCWDIHKPGSLWPE*LQVHRF
Trigger: GAAACGATGAACCTGTAATCACTCTGGCCAAAGAGA...CCCAGGCTTATGTATGTCCCAGCAGAAGCCACCGCTTGAACTAGAGGTGAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp CTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCCTCTGTCTGAGTAGGTaGCACCATGCCTCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LNCRSHGNIHFCSTSSSRLCLSR*HHASLL
Trigger: GAGAAGGGAGGCATGGTGTCACCTACTCAGACAGAG...GCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR TCA 90 bp AACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCTCTCTCTGTCTGAGTAGGTaGCACCATGCCTCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: NCRSHGNIHFCSTSSSRSLCLSR*HHASLL
Trigger: GAGAAGGGAGGCATGGTGTCACCTACTCAGACAGAG...AGAGCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR TCA 90 bp CCAGCAAAAACACCAGAACTTTCTACTTCCCAAGAGCCTGCCCAATTTAGCTACTCTTCCAGCCGCTCTTaGGGACGTCATTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: PAKTPELSTSQEPAQFSYSSSRS*GRHSPS
Trigger: AGAAGGTGAATGACGTCCTCAAGAGCGGCTGGAAGA...GTAGCTAAATTGGGCAGGCTCTTGGGAAGTAGAAAGTTCTGGTGTTTTTGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp CTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCGGCAGGAGAATTGCTTaGGCCTGTGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LNCRSHGNIHFCSTSSSRGRRIA*ACEAEV
Trigger: AACCTCTGCCTCACAGGCTCAAGCAATTCTCCTGCC...GCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp TCACGAGTGCACAGGAAACACATTGTCACTAGCTATTATCATTTGCTGTGCTGTGGTGGGAGGATTACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: SRVHRKHIVTSYYHLLCCGGRIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTAATCCTCCCACC...ACAGCACAGCAAATGATAATAGCTAGTGACAATGTGTTTCCTGTGCACTCGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp CTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCGGCTTCCAGAACTCCTaGGGTGAACTCGTACAGCTC +
Preference number: 4 (lower is better)
Translates to: LNCRSHGNIHFCSTSSSRGFQNS*GELVQL
Trigger: GAGCTGTACGAGTTCACCGCAGGAGTTCTGGAAGCC...GCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR GCA 90 bp TTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCTCAGCCCCTCCTTCTaGACCCGTGTCCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: FLNCRSHGNIHFCSTSSSLSPSF*TRVLRL
Trigger: CAGCCTGAGGACACGGGTGCAGAAGGAGGGGCTGAG...GCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR GCA 90 bp TTCAGTCAACAAAGAAACCCAAAGCACAAAAGCCAGCCTCTGGGTGTGGCCATGACTGACTCCAGACAGTaGATTTCATCACCCAGATGC +
Preference number: 4 (lower is better)
Translates to: FSQQRNPKHKSQPLGVAMTDSRQ*ISSPRC
Trigger: GCATCTGGGTGATGAAATGCACTGTCTGGAGTCAGT...CATGGCCACACCCAGAGGCTGGCTTTTGTGCTTTGGGTTTCTTTGTTGACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp CAATGCAGATGGGGTGGCGAATGTCTGCAGGGCTCACGACATGTAGGCATTCAAAAAAAGCAACCTTTGTaGCATTTGCTCAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: QCRWGGECLQGSRHVGIQKKQPL*HLLRTL
Trigger: CAGAGTCCTGAGCAAATGGCACAAAGGTTGCTTTTT...TTGAATGCCTACATGTCGTGAGCCCTGCAGACATTCGCCACCCCATCTGCATTG
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp ATTGTCACTAGCTATTATCATTTGCTGTGCTGTATGAAAGAGACTCGGCGCACCGTGCTGCAGCCACAATaGAGATGGGGTGGCGAATGT +
Preference number: 4 (lower is better)
Translates to: IVTSYYHLLCCMKETRRTVLQPQ*RWGGEC
Trigger: ACATTCGCCACCCCATCTGCATTGTGGCTGCAGCAC...GGTGCGCCGAGTCTCTTTCATACAGCACAGCAAATGATAATAGCTAGTGACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp AACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCTCTCTGTGCTGTGGCTGTTaGCCTGAGGTCACCGACAAT +
Preference number: 4 (lower is better)
Translates to: NCRSHGNIHFCSTSSSRSLCCGC*PEVTDN
Trigger: ATTGTCGGTGACCTCAGGCCAACAGCCACAGCACAG...AGAGCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp GTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTGCTCTGCGGGGACCTTaGCGTCCGCTCGCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: VMTDCFLNCRSHGNIHFCALRGP*RPLAPS
Trigger: ACTTGGAGCGAGCGGACGCCAAGGTCCCCGCAGAGC...ACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp TTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCGGGAGATGCAGCAGCTaGTCCCTTGTGACGAGCCCC +
Preference number: 4 (lower is better)
Translates to: FLNCRSHGNIHFCSTSSSGRCSS*SLVTSP
Trigger: GGGGCTCGTCACAAGGGACCAGCTGCTGCATCTCCC...GCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637289.1
ENST00000647536.1
CDS-3UTR CCA 90 bp TCACGAGTGCACAGGAAACACATTGTCACTAGCTATTATCATTTGCTGTGCTGTAGCAGCATCTTCTGCTaGAGGCGTCCTAGACGGGAG +
Preference number: 4 (lower is better)
Translates to: SRVHRKHIVTSYYHLLCCSSIFC*RRPRRE
Trigger: CTCCCGTCTAGGACGCCTCCAGCAGAAGATGCTGCT...ACAGCACAGCAAATGATAATAGCTAGTGACAATGTGTTTCCTGTGCACTCGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564769.2
CDS-3UTR CCA 90 bp CTCCAGACAGTGCATTTCATCACCCAGATGCATGTCTGCTCTGCCAGGGTGAGTAATCCCACTATCTCATaGTTGAAAGGGCTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: LQTVHFITQMHVCSARVSNPTIS*LKGLVQ
Trigger: TTGAACCAGCCCTTTCAACCATGAGATAGTGGGATT...ACTCACCCTGGCAGAGCAGACATGCATCTGGGTGATGAAATGCACTGTCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp ATTGTCACTAGCTATTATCATTTGCTGTGCTGTATGAAAGAGACTCGGCGCACCCACCCCGGAAAGGCCTaGGTCTTACTGAGCAATCCA +
Preference number: 4 (lower is better)
Translates to: IVTSYYHLLCCMKETRRTHPGKA*VLLSNP
Trigger: TGGATTGCTCAGTAAGACCCAGGCCTTTCCGGGGTG...GGTGCGCCGAGTCTCTTTCATACAGCACAGCAAATGATAATAGCTAGTGACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp TTTGCTGTGCTGTATGAAAGAGACTCGGCGCACCTGGGTGTAAACAGCAGGCAGAAACAGACACTGATATaGGTGTTAGAAGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: FAVLYERDSAHLGVNSRQKQTLI*VLEELH
Trigger: GTGGAGCTCTTCTAACACCCATATCAGTGTCTGTTT...CTGCCTGCTGTTTACACCCAGGTGCGCCGAGTCTCTTTCATACAGCACAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp GACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTCACACGTGGCATCGGTaGTGGCCAAGAGTGGGACGC +
Preference number: 4 (lower is better)
Translates to: DCFLNCRSHGNIHFCSTSHTWHR*WPRVGR
Trigger: GCGTCCCACTCTTGGCCATCACCGATGCCACGTGTG...AGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR TCA 90 bp CAGCTTCACCCCGGAAAGGCCTGGGTCTTACTGAGCAATCCAATTTCTATCCCTGAAGTCAACTTACTCTaGGGAGCTATCACTATCCAA +
Preference number: 4 (lower is better)
Translates to: QLHPGKAWVLLSNPISIPEVNLL*GAITIQ
Trigger: TTGGATAGTGATAGCTCCTCAGAGTAAGTTGACTTC...AGGGATAGAAATTGGATTGCTCAGTAAGACCCAGGCCTTTCCGGGGTGAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp CACCTTCTCTTTCACTCTCACTGTCGTCATCCTCTGAAGTGCTGCTACTGTCTTCCCCACAGGCCCTTGTaGATTTCCACTAAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: HLLFHSHCRHPLKCCYCLPHRPL*ISTKKQ
Trigger: TTGCTTTTTAGTGGAAATTCACAAGGGCCTGTGGGG...AAGACAGTAGCAGCACTTCAGAGGATGACGACAGTGAGAGTGAAAGAGAAGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp ACCTTTCTCGCTTTTTCAGTCAACAAAGAAACCCAAAGCACAAAAGCCAGCCTCGGCCAGGCCACACAATaGGGGGATGTCTCATTTTAC +
Preference number: 4 (lower is better)
Translates to: TFLAFSVNKETQSTKASLGQATQ*GDVSFY
Trigger: GTAAAATGAGACATCCCCTCATTGTGTGGCCTGGCC...GAGGCTGGCTTTTGTGCTTTGGGTTTCTTTGTTGACTGAAAAAGCGAGAAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp GTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTACTACCACGGGCGGCTaGAGGCCCTTCAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VMTDCFLNCRSHGNIHFCTTTGG*RPFSFC
Trigger: GCAGAAGCTGAAGGGCCTGCAGCCGCCCGTGGTAGT...ACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR GCA 90 bp GACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTGAACTCGTACAGCTCTaGGGGGACCTTGGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: DCFLNCRSHGNIHFCSTSELVQL*GDLGVR
Trigger: GCGGACGCCAAGGTCCCCGCAGAGCTGTACGAGTTC...AGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR GCA 90 bp CAATGCAGATGGGGTGGCGAATGTCTGCAGGGCTCACGACATGTAGGCATTCAAGATTATCAATGCCCATaGCCATGGACAAAATTTCAG +
Preference number: 4 (lower is better)
Translates to: QCRWGGECLQGSRHVGIQDYQCP*PWTKFQ
Trigger: CTGAAATTTTGTCCATGGGCATGGGCATTGATAATC...TTGAATGCCTACATGTCGTGAGCCCTGCAGACATTCGCCACCCCATCTGCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637289.1
CDS-3UTR GCA 90 bp AAGATCTTGGGGCCGTCACACAACACTCATGTTCTATCCAAATTCTTTTCCATTTCAGGCTGGGGGCTCTaGAGGCAAGCAGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: KILGPSHNTHVLSKFFSISGWGL*RQAASS
Trigger: AGAAGATGCTGCTTGCCTGCAGAGCCCCCAGCCTGA...AATGGAAAAGAATTTGGATAGAACATGAGTGTTGTGTGACGGCCCCAAGATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCCTGTGCTGTGGCTGTTaGCCTGAGGTCACCGACAAT +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPILCCGC*PEVTDN
Trigger: ATTGTCGGTGACCTCAGGCCAACAGCCACAGCACAG...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR CCA 90 bp AACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCTCTAAGGTAGGGCTTGGCTaGACAGTTTCCTGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: NCRSHGNIHFCSTSSSRSKVGLG*TVSWAS
Trigger: ACTTGCCCAGGAAACTGTCCAGCCAAGCCCTACCTT...AGAGCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp ATTGTCACTAGCTATTATCATTTGCTGTGCTGTATGAAAGAGACTCGGCGCACCTTTCTGAGCTCGTCTTaGACTCAGCCCCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: IVTSYYHLLCCMKETRRTFLSSS*TQPLLL
Trigger: CAGAAGGAGGGGCTGAGTCCAAGACGAGCTCAGAAA...GGTGCGCCGAGTCTCTTTCATACAGCACAGCAAATGATAATAGCTAGTGACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp GACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTAGGAACAGCAGGCTCTaGCAGGCGAGAAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: DCFLNCRSHGNIHFCSTSRNSRL*QARSLS
Trigger: GCTGAGGCTTCTCGCCTGTCAGAGCCTGCTGTTCCT...AGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR TCA 90 bp TGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCCCAGAACTCCTGCGGTaGACTCGTACAGCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: CFLNCRSHGNIHFCSTSSPELLR*TRTALR
Trigger: CCGCAGAGCTGTACGAGTTCACCGCAGGAGTTCTGG...GGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR TCA 90 bp TGTCGTCATCCTCTGAAGTGCTGCTACTGTCTTCAACCACCTCTGTCACTGTGTGAAGTCAACTTACTCTaGGGAGCTATCACTATCCAA +
Preference number: 4 (lower is better)
Translates to: CRHPLKCCYCLQPPLSLCEVNLL*GAITIQ
Trigger: TTGGATAGTGATAGCTCCTCAGAGTAAGTTGACTTC...ACACAGTGACAGAGGTGGTTGAAGACAGTAGCAGCACTTCAGAGGATGACGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp TCACGAGTGCACAGGAAACACATTGTCACTAGCTATTATCATTTGCTGTGCTGTCTTCATGGGCTGATTTaGTACCTGCCAGTCACCCTG +
Preference number: 4 (lower is better)
Translates to: SRVHRKHIVTSYYHLLCCLHGLI*YLPVTL
Trigger: CAGGGTGACTGGCAGGTATCAAATCAGCCCATGAAG...ACAGCACAGCAAATGATAATAGCTAGTGACAATGTGTTTCCTGTGCACTCGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCTACAGCTTTGTCCTGTaGTGTGGCTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPIYSFVL*CGCWPE
Trigger: CTCAGGCCAACAGCCACAGCACAGGACAAAGCTGTA...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR GCA 90 bp GTGCACAGGAAACACATTGTCACTAGCTATTATCATTTGCTGTGCTGTATGAAAGATGCATGTCTGCTCTaGCAGGGTGAGTGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: VHRKHIVTSYYHLLCCMKDACLL*QGEWRE
Trigger: CTCTCGCCACTCACCCTGGCAGAGCAGACATGCATC...TTTCATACAGCACAGCAAATGATAATAGCTAGTGACAATGTGTTTCCTGTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp TGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGGACGCCCACCGCATaGCTCGCATCTTTCTCCGTC +
Preference number: 4 (lower is better)
Translates to: CFLNCRSHGNIHFCSTSSRTPTA*LASFSV
Trigger: GACGGAGAAAGATGCGAGCCATGCGGTGGGCGTCCT...GGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp AACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCTCTGGGCAAGTCCGTTTCTaGATTAATACGGTGTCGGTC +
Preference number: 4 (lower is better)
Translates to: NCRSHGNIHFCSTSSSRSGQVRF*INTVSV
Trigger: GACCGACACCGTATTAATCCAGAAACGGACTTGCCC...AGAGCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp TTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCACCCTCGGCGGGGTCTaGCTTAGGCTTTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: FLTVGHMAISIFVQHLPATLGGV*LRLSSQ
Trigger: TTGTGAAGAAAGCCTAAGCCAGACCCCGCCGAGGGT...GGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR CCA 90 bp TTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCCCCCATCAGAGCCACTaGGCAGAAAAACTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: FLTVGHMAISIFVQHLPAPHQSH*AEKLPN
Trigger: GTTGGGCAGTTTTTCTGCCCAGTGGCTCTGATGGGG...GGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp ACTTTTAATTTCCCAATAGCTCACCTTTCTCGCTTTTTCAGTCAACAAAGAAACGCCATAGCAGTGACCTaGGCACACTCCCGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TFNFPIAHLSRFFSQQRNAIAVT*AHSRQL
Trigger: CAGCTGCCGGGAGTGTGCCCAGGTCACTGCTATGGC...GTTTCTTTGTTGACTGAAAAAGCGAGAAAGGTGAGCTATTGGGAAATTAAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp TCACTCTCACTGTCGTCATCCTCTGAAGTGCTGCTACTGTCTTCAACCACCTCTAAACAGACACTGATATaGGTGTTAGAAGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SLSLSSSSEVLLLSSTTSKQTLI*VLEELH
Trigger: GTGGAGCTCTTCTAACACCCATATCAGTGTCTGTTT...AGAGGTGGTTGAAGACAGTAGCAGCACTTCAGAGGATGACGACAGTGAGAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR CAA 72 bp AAAAAGGAAAATCACCATCTTCCTTCATGGGCTGATTaGATACCTGCCAGTCACCCTGCGAAGGCCATAGCA +
Preference number: 4 (lower is better)
Translates to: KKENHHLPSWAD*IPASHPAKAIA
Trigger: TGCTATGGCCTTCGCAGGGTGACTGGCAGGTATCAAATCAGCCCATGAAGGAAGATGGTGATTTTCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp CTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCTGCTGGCCAGTACACTaGGGATTCAACACGCTTATT +
Preference number: 4 (lower is better)
Translates to: LNCRSHGNIHFCSTSSSRCWPVH*GFNTLI
Trigger: AATAAGCGTGTTGAATCCTCAGTGTACTGGCCAGCA...GCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR TCA 90 bp TTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCAGGCTTCTGGTTTTCTaGGCTCGTCTTGGACTCAGC +
Preference number: 4 (lower is better)
Translates to: FLTVGHMAISIFVQHLPARLLVF*ARLGLS
Trigger: GCTGAGTCCAAGACGAGCTCAGAAAACCAGAAGCCT...GGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR TCA 90 bp AACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCTCTTCTTCCTTCATGGGCTaGTTTGATACCTGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: NCRSHGNIHFCSTSSSRSSSFMG*FDTCQS
Trigger: TGACTGGCAGGTATCAAATCAGCCCATGAAGGAAGA...AGAGCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCCACAAGGAAACATTCTaGCAGGTACTGGTCTGCGGA +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPIHKETF*QVLVCG
Trigger: TCCGCAGACCAGTACCTGGCAGAATGTTTCCTTGTG...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR GCA 90 bp CTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCCACCGACAATACCCTTaGACCATGTATGTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LNCRSHGNIHFCSTSSSRHRQYP*TMYVAE
Trigger: CTCTGCAACATACATGGTGCAAGGGTATTGTCGGTG...GCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR GCA 90 bp TTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCTACAGCTTTGTCCTGTaGTGTGGCTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: FLTVGHMAISIFVQHLPAYSFVL*CGCWPE
Trigger: CTCAGGCCAACAGCCACAGCACAGGACAAAGCTGTA...GGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR GCA 90 bp AACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCTCTTTCAGCTTCTGCAACTaGTGGAGATCAGAGATTCCG +
Preference number: 4 (lower is better)
Translates to: NCRSHGNIHFCSTSSSRSFSFCN*WRSEIP
Trigger: CGGAATCTCTGATCTCCAGCAGTTGCAGAAGCTGAA...AGAGCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR GCA 90 bp TTGGTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTCAGGCTGGGGGCTCTaGAGGCAAGCAGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: LVMTDCFLNCRSHGNIHFSGWGL*RQAASS
Trigger: AGAAGATGCTGCTTGCCTGCAGAGCCCCCAGCCTGA...AAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR GCA 90 bp ACAAAGTTCACCTCTAGTTCAAGCGGTGGCTTCTGCTGGGACATACATAAGCCTAAAAAGCAACCTTTGTaGCATTTGCTCAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: TKFTSSSSGGFCWDIHKPKKQPL*HLLRTL
Trigger: CAGAGTCCTGAGCAAATGGCACAAAGGTTGCTTTTT...AGGCTTATGTATGTCCCAGCAGAAGCCACCGCTTGAACTAGAGGTGAACTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp CACCTTCTCTTTCACTCTCACTGTCGTCATCCTCTGAAGTGCTGCTACTGTCTTCTGCATTTTCACGAGTaGACAGGAAACACATTGTCA +
Preference number: 4 (lower is better)
Translates to: HLLFHSHCRHPLKCCYCLLHFHE*TGNTLS
Trigger: TGACAATGTGTTTCCTGTGCACTCGTGAAAATGCAG...AAGACAGTAGCAGCACTTCAGAGGATGACGACAGTGAGAGTGAAAGAGAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp GACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTGGTGATGGCCAAGAGTaGGACGCAGTCGTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: DCFLNCRSHGNIHFCSTSGDGQE*DAVVCE
Trigger: CTCACAGACGACTGCGTCCCACTCTTGGCCATCACC...AGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp TTTGCTGTGCTGTATGAAAGAGACTCGGCGCACCTGGGTGTAAACAGCAGGCAGTTTCTAATCACACATTaGCAGTCATCTTTCCTTATG +
Preference number: 4 (lower is better)
Translates to: FAVLYERDSAHLGVNSRQFLITH*QSSFLM
Trigger: CATAAGGAAAGATGACTGCCAATGTGTGATTAGAAA...CTGCCTGCTGTTTACACCCAGGTGCGCCGAGTCTCTTTCATACAGCACAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
3UTR CAA 72 bp CAGAGTGATTACAGGTTCATCGTTTCTAATCACACATaGGCAGTCATCTTTCCTTATGTTGCCCCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QSDYRFIVSNHT*AVIFPYVAPQL
Trigger: GAGCTGCGGGGCAACATAAGGAAAGATGACTGCCAATGTGTGATTAGAAACGATGAACCTGTAATCACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564769.2
CDS-3UTR TCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCTGCGGAAGACGTAATTaGTTTGACAATGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPICGRRN*FDNGPA
Trigger: TGCAGGGCCATTGTCAAATCAATTACGTCTTCCGCA...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR TCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCTGCTGGCCAGTACACTaGGGATTCAACACGCTTATT +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPICWPVH*GFNTLI
Trigger: AATAAGCGTGTTGAATCCTCAGTGTACTGGCCAGCA...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR TCA 90 bp TGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCCTTCTTCAGGTCTGCTaGCAGCGGCGACGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: CFLNCRSHGNIHFCSTSSLLQVC*QRRRVN
Trigger: ATTGACTCGTCGCCGCTGTCAGCAGACCTGAAGAAG...GGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR TCA 90 bp CTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCTCCTGCCTTCATCGATaGACTCTACAAGGATGTCAT +
Preference number: 4 (lower is better)
Translates to: LNCRSHGNIHFCSTSSSRSCLHR*TLQGCH
Trigger: ATGACATCCTTGTAGAGTTCATCGATGAAGGCAGGA...GCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637289.1
ENST00000647536.1
CDS-3UTR TCA 90 bp GTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTGGGGTTCCTCTGTCTaGGTAGGTGACACCATGCCT +
Preference number: 4 (lower is better)
Translates to: VMTDCFLNCRSHGNIHFCWGSSV*VGDTMP
Trigger: AGGCATGGTGTCACCTACTCAGACAGAGGAACCCCA...ACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000647536.1
CDS-3UTR TCA 90 bp TTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCATTTGCTGTGCTGTATaGAAGAGACTCGGCGCACCT +
Preference number: 4 (lower is better)
Translates to: FLTVGHMAISIFVQHLPAICCAV*KRLGAP
Trigger: AGGTGCGCCGAGTCTCTTTCATACAGCACAGCAAAT...GGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCCACCGACAATACCCTTaGACCATGTATGTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPIHRQYP*TMYVAE
Trigger: CTCTGCAACATACATGGTGCAAGGGTATTGTCGGTG...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR GCA 90 bp TTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCCTTATCTCCCTGTTCTaGAGGAGAACCCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: FLTVGHMAISIFVQHLPALISLF*RRTLFS
Trigger: GCTGAACAGGGTTCTCCTGCAGAACAGGGAGATAAG...GGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR GCA 90 bp CCAGCAAAAACACCAGAACTTTCTACTTCCCAAGAGCCTGCCCAATTTAGCTACGTTCTGGATTATCAATaGCCATGCCCATGGACAAAA +
Preference number: 4 (lower is better)
Translates to: PAKTPELSTSQEPAQFSYVLDYQ*PCPWTK
Trigger: TTTTGTCCATGGGCATGGGCATTGATAATCCAGAAC...GTAGCTAAATTGGGCAGGCTCTTGGGAAGTAGAAAGTTCTGGTGTTTTTGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637289.1
CDS-3UTR GCA 90 bp TTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCTTTCAGAGGCGGCTGTaGAGTTCTGCTAATGAAGGC +
Preference number: 4 (lower is better)
Translates to: FLTVGHMAISIFVQHLPAFQRRL*SSANEG
Trigger: GCCTTCATTAGCAGAACTGCACAGCCGCCTCTGAAA...GGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR GCA 90 bp TCACGAGTGCACAGGAAACACATTGTCACTAGCTATTATCATTTGCTGTGCTGTCATCCTCTGAAGTGCTaGTACTGTCTTCAACCACCT +
Preference number: 4 (lower is better)
Translates to: SRVHRKHIVTSYYHLLCCHPLKC*YCLQPP
Trigger: AGGTGGTTGAAGACAGTAGCAGCACTTCAGAGGATG...ACAGCACAGCAAATGATAATAGCTAGTGACAATGTGTTTCCTGTGCACTCGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp TCACGAGTGCACAGGAAACACATTGTCACTAGCTATTATCATTTGCTGTGCTGTCGTCATCCTCTGAAGTaGTGCTACTGTCTTCAACCA +
Preference number: 4 (lower is better)
Translates to: SRVHRKHIVTSYYHLLCCRHPLK*CYCLQP
Trigger: TGGTTGAAGACAGTAGCAGCACTTCAGAGGATGACG...ACAGCACAGCAAATGATAATAGCTAGTGACAATGTGTTTCCTGTGCACTCGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp AAGACCTGCGCATTCATTGATCTTATTAACTGGGTAAGGGACGCCGACTCCTCCAAACAAGACACAGAGTaGACAGGACTTTTAATTTCC +
Preference number: 4 (lower is better)
Translates to: KTCAFIDLINWVRDADSSKQDTE*TGLLIS
Trigger: GGAAATTAAAAGTCCTGTGCACTCTGTGTCTTGTTT...GGAGGAGTCGGCGTCCCTTACCCAGTTAATAAGATCAATGAATGCGCAGGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564769.2
CDS-3UTR CCA 90 bp CTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCAACCCAGAAGCAACCTaGATCTTCAATCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: LNCRSHGNIHFCSTSSSRNPEAT*IFNLQH
Trigger: GTGCTGAAGATTGAAGATCCAGGTTGCTTCTGGGTT...GCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCCATTCTGCCAGGTACTaGTCTGCGGAAGACGTAATT +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPIHSARY*SAEDVI
Trigger: AATTACGTCTTCCGCAGACCAGTACCTGGCAGAATG...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR CCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCAATCTGGCTTCCACCTaGGTAGTTGCTTTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPINLAST*VVAFRR
Trigger: CCTTCTGAAAGCAACTACCCAGGTGGAAGCCAGATT...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR CCA 90 bp TTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCTGTGTGGAAATGTTCTaGGAGATGCAGCAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: FLTVGHMAISIFVQHLPACVEMF*EMQQLV
Trigger: GACCAGCTGCTGCATCTCCCAGAACATTTCCACACA...GGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637289.1
ENST00000647536.1
CDS-3UTR CCA 90 bp AACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCTCTGCTTTCTTCACAAGCTaGTATCTTAGCATCTTCGCG +
Preference number: 4 (lower is better)
Translates to: NCRSHGNIHFCSTSSSRSAFFTS*YLSIFA
Trigger: CGCGAAGATGCTAAGATACCAGCTTGTGAAGAAAGC...AGAGCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR CCA 90 bp GAAAACAGTGAAATTTTATTGATGATACACTGCGGAAGACATCCATACCACAACAGCGGTGGCTTCTGCTaGGACATACATAAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ENSEILLMIHCGRHPYHNSGGFC*DIHKPG
Trigger: CCCAGGCTTATGTATGTCCCAGCAGAAGCCACCGCT...GTTGTGGTATGGATGTCTTCCGCAGTGTATCATCAATAAAATTTCACTGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564769.2
CDS-3UTR CCA 90 bp AACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCTCTCATTTTATTTGTGGGTaGAAGCTTTTCAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: NCRSHGNIHFCSTSSSRSHFICG*KLFRGG
Trigger: GCCGCCTCTGAAAAGCTTCCACCCACAAATAAAATG...AGAGCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000637289.1
ENST00000647536.1
CDS-3UTR TCA 90 bp TTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCCAGCTACAGAGCAGGTaGAGATCAAGGTCTTTTGTG +
Preference number: 4 (lower is better)
Translates to: FLTVGHMAISIFVQHLPAQLQSR*RSRSFV
Trigger: CACAAAAGACCTTGATCTTCACCTGCTCTGTAGCTG...GGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR TCA 90 bp TTGGTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTGCAGGGAAACTGAAGTaGATCACACACGTGGCATCG +
Preference number: 4 (lower is better)
Translates to: LVMTDCFLNCRSHGNIHFAGKLK*ITHVAS
Trigger: CGATGCCACGTGTGTGATTCACTTCAGTTTCCCTGC...AAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR TCA 90 bp TTTAATTTCCCAATAGCTCACCTTTCTCGCTTTTTCAGTCAACAAAGAAACCCAAGGCTTCTGGTTTTCTaGGCTCGTCTTGGACTCAGC +
Preference number: 4 (lower is better)
Translates to: FNFPIAHLSRFFSQQRNPRLLVF*ARLGLS
Trigger: GCTGAGTCCAAGACGAGCTCAGAAAACCAGAAGCCT...TGGGTTTCTTTGTTGACTGAAAAAGCGAGAAAGGTGAGCTATTGGGAAATTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp TCACGAGTGCACAGGAAACACATTGTCACTAGCTATTATCATTTGCTGTGCTGTTCACAGTCTTCCCAGTaGTCAAAATCAAAAGCCACG +
Preference number: 4 (lower is better)
Translates to: SRVHRKHIVTSYYHLLCCSQSSQ*SKSKAT
Trigger: CGTGGCTTTTGATTTTGATCACTGGGAAGACTGTGA...ACAGCACAGCAAATGATAATAGCTAGTGACAATGTGTTTCCTGTGCACTCGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564769.2
CDS-3UTR TCA 90 bp TTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCACTGTCGTCATCCTCTaGAGTGCTGCTACTGTCTTC +
Preference number: 4 (lower is better)
Translates to: FLNCRSHGNIHFCSTSSSTVVIL*SAATVF
Trigger: GAAGACAGTAGCAGCACTTCAGAGGATGACGACAGT...GCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR TCA 90 bp ACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCTCTTaGGGACGTCATTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: TDCFLNCRSHGNIHFCSTSSSRS*GRHSPS
Trigger: AGAAGGTGAATGACGTCCTCAAGAGCGGCTGGAAGA...TGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR TCA 90 bp GTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCTTCCAGCCGCTCTTaGGGACGTCATTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: VMTDCFLNCRSHGNIHFCSSSRS*GRHSPS
Trigger: AGAAGGTGAATGACGTCCTCAAGAGCGGCTGGAAGA...ACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR GCA 90 bp CTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCTTCCACCTGGGTAGTTaGTTTCAGAAGGTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: LNCRSHGNIHFCSTSSSRFHLGS*FQKVLK
Trigger: TTTCAGAACCTTCTGAAAGCAACTACCCAGGTGGAA...GCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR GCA 90 bp TGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGGCCCTTCAGCTTCTaGAACTGCTGGAGATCAGAG +
Preference number: 4 (lower is better)
Translates to: CFLNCRSHGNIHFCSTSSRPFSF*NCWRSE
Trigger: CTCTGATCTCCAGCAGTTGCAGAAGCTGAAGGGCCT...GGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR GCA 90 bp TTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCAGGGCACACGATGACTaGGAGAGGTCCATTTCTACT +
Preference number: 4 (lower is better)
Translates to: FLNCRSHGNIHFCSTSSSRAHDD*ERSIST
Trigger: AGTAGAAATGGACCTCTCGCAGTCATCGTGTGCCCT...GCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR GCA 90 bp CTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCGTTCTGGATTATCAATaGCCATGCCCATGGACAAAA +
Preference number: 4 (lower is better)
Translates to: LNCRSHGNIHFCSTSSSRVLDYQ*PCPWTK
Trigger: TTTTGTCCATGGGCATGGGCATTGATAATCCAGAAC...GCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637289.1
ENST00000647536.1
CDS-3UTR GCA 90 bp CTTTCACTCTCACTGTCGTCATCCTCTGAAGTGCTGCTACTGTCTTCAACCACCAGAAGAAGAAAGACCTaGGCATTCATTGATCTTATT +
Preference number: 4 (lower is better)
Translates to: LSLSLSSSSEVLLLSSTTRRRKT*AFIDLI
Trigger: AATAAGATCAATGAATGCGCAGGTCTTTCTTCTTCT...GGTGGTTGAAGACAGTAGCAGCACTTCAGAGGATGACGACAGTGAGAGTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564769.2
CDS-3UTR GCA 90 bp TTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCCGTCATCCTCTGAAGTaGTGCTACTGTCTTCAACCA +
Preference number: 4 (lower is better)
Translates to: FLTVGHMAISIFVQHLPARHPLK*CYCLQP
Trigger: TGGTTGAAGACAGTAGCAGCACTTCAGAGGATGACG...GGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR GCA 90 bp GTGCACAGGAAACACATTGTCACTAGCTATTATCATTTGCTGTGCTGTATGAAAAGTGTGATCCAGACCTaGTCACAGGACAGCTTGATG +
Preference number: 4 (lower is better)
Translates to: VHRKHIVTSYYHLLCCMKSVIQT*SQDSLM
Trigger: CATCAAGCTGTCCTGTGAGCAGGTCTGGATCACACT...TTTCATACAGCACAGCAAATGATAATAGCTAGTGACAATGTGTTTCCTGTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp CAGTTGTCCTCCCTGCATTTTCACGAGTGCACAGGAAACACATTGTCACTAGCTTATTATCATTTGCTGTaGTGTATGAAAGAGACTCGG +
Preference number: 4 (lower is better)
Translates to: QLSSLHFHECTGNTLSLAYYHLL*CMKETR
Trigger: CCGAGTCTCTTTCATACAGCACAGCAAATGATAATA...AGCTAGTGACAATGTGTTTCCTGTGCACTCGTGAAAATGCAGGGAGGACAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCAACCCAGAAGCAACCTaGATCTTCAATCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPINPEAT*IFNLQH
Trigger: GTGCTGAAGATTGAAGATCCAGGTTGCTTCTGGGTT...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR CCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCCATTGTCCCACTTCTTaGCAGGTACAATGTCAGTAC +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPIHCPTS*QVQCQY
Trigger: GTACTGACATTGTACCTGCCAAGAAGTGGGACAATG...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR CCA 90 bp GTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTCACAGCCACGCGCTATaGGAGGCCAAGAGTAAGATT +
Preference number: 4 (lower is better)
Translates to: VMTDCFLNCRSHGNIHFCHSHAL*EAKSKI
Trigger: AATCTTACTCTTGGCCTCCCATAGCGCGTGGCTGTG...ACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp GACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTGGCTGGACAGTTTCCTaGGCAAGTCCGTTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: DCFLNCRSHGNIHFCSTSGWTVS*ASPFLD
Trigger: ATCCAGAAACGGACTTGCCCAGGAAACTGTCCAGCC...AGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp TGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAATGAAGGTAGGGCTTaGCTGGACAGTTTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CFLNCRSHGNIHFCSTSSNEGRA*LDSFLG
Trigger: GCCCAGGAAACTGTCCAGCCAAGCCCTACCTTCATT...GGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp GACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTGCGGGGGAAGTGTGTaGAAATGTTCTGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: DCFLNCRSHGNIHFCSTSCGGSV*KCSGRC
Trigger: GCATCTCCCAGAACATTTCCACACACTTCCCCCGCA...AGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000637289.1
ENST00000647536.1
CDS-3UTR CCA 90 bp ACTTTTAATTTCCCAATAGCTCACCTTTCTCGCTTTTTCAGTCAACAAAGAAACACCCTCGGCGGGGTCTaGCTTAGGCTTTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: TFNFPIAHLSRFFSQQRNTLGGV*LRLSSQ
Trigger: TTGTGAAGAAAGCCTAAGCCAGACCCCGCCGAGGGT...GTTTCTTTGTTGACTGAAAAAGCGAGAAAGGTGAGCTATTGGGAAATTAAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp GTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTTTCTGAGCTCGTCTTaGACTCAGCCCCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: VMTDCFLNCRSHGNIHFCFLSSS*TQPLLL
Trigger: CAGAAGGAGGGGCTGAGTCCAAGACGAGCTCAGAAA...ACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR CCA 90 bp ACCTTTCTCGCTTTTTCAGTCAACAAAGAAACCCAAAGCACAAAAGCCAGCCTCAAAGTTTCAGGCTTCTaGTTTTCTGAGCTCGTCTTG +
Preference number: 4 (lower is better)
Translates to: TFLAFSVNKETQSTKASLKVSGF*FSELVL
Trigger: CAAGACGAGCTCAGAAAACCAGAAGCCTGAAACTTT...GAGGCTGGCTTTTGTGCTTTGGGTTTCTTTGTTGACTGAAAAAGCGAGAAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp TTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCTGCGGAAGACGTAATTaGTTTGACAATGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: FLNCRSHGNIHFCSTSSSCGRRN*FDNGPA
Trigger: TGCAGGGCCATTGTCAAATCAATTACGTCTTCCGCA...GCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR TCA 90 bp GACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTGGTTAAGCAGGGCTTaGTCTTGTTCCGGAGCACTA +
Preference number: 4 (lower is better)
Translates to: DCFLNCRSHGNIHFCSTSWLSRA*SCSGAL
Trigger: TAGTGCTCCGGAACAAGATCAAGCCCTGCTTAACCA...AGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR TCA 90 bp CTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCGGAAACTTATTTCTTTaGAGAGCCTTCTTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LNCRSHGNIHFCSTSSSRGNLFL*RAFFRS
Trigger: AGACCTGAAGAAGGCTCTTCAAAGAAATAAGTTTCC...GCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR TCA 90 bp TTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCCAACTGCAACAATCTaGTGTGGTGCAGATTCCCTT +
Preference number: 4 (lower is better)
Translates to: FLNCRSHGNIHFCSTSSSPTATI*CGADSL
Trigger: AAGGGAATCTGCACCACATCAGATTGTTGCAGTTGG...GCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR TCA 90 bp TTGGTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTGTGTCCACCCTCCTTTaGTGGTCTTATCATCAGCCT +
Preference number: 4 (lower is better)
Translates to: LVMTDCFLNCRSHGNIHFVSTLL*WSYHQP
Trigger: AGGCTGATGATAAGACCATCAAAGGAGGGTGGACAC...AAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp GTGCACAGGAAACACATTGTCACTAGCTATTATCATTTGCTGTGCTGTATGAAAAGGCCTGGGTCTTACTaGGCAATCCAATTTCTATCC +
Preference number: 4 (lower is better)
Translates to: VHRKHIVTSYYHLLCCMKRPGSY*AIQFLS
Trigger: GGATAGAAATTGGATTGCTCAGTAAGACCCAGGCCT...TTTCATACAGCACAGCAAATGATAATAGCTAGTGACAATGTGTTTCCTGTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp TTGGTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTCACAAGGAAACATTCTaGCAGGTACTGGTCTGCGGA +
Preference number: 4 (lower is better)
Translates to: LVMTDCFLNCRSHGNIHFHKETF*QVLVCG
Trigger: TCCGCAGACCAGTACCTGGCAGAATGTTTCCTTGTG...AAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR GCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCAAAGTACTGAATAGCTaGATTGTCCCACTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPIKVLNS*IVPLLG
Trigger: GCCAAGAAGTGGGACAATGCAGCTATTCAGTACTTT...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR GCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCTTCCACCTGGGTAGTTaGTTTCAGAAGGTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPIFHLGS*FQKVLK
Trigger: TTTCAGAACCTTCTGAAAGCAACTACCCAGGTGGAA...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR GCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCTTGCACCATGTATGTTaGAGAGATTGTGCCGGAAAA +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPILHHVC*RDCAGK
Trigger: TTTTCCGGCACAATCTCTGCAACATACATGGTGCAA...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR GCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCCAGCATATATGGTTATaGCTCTTTTTGCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPIQHIWL*LFLLAS
Trigger: ACTGGCCAGCAAAAAGAGGCATAACCATATATGCTG...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR GCA 90 bp TTTAATTTCCCAATAGCTCACCTTTCTCGCTTTTTCAGTCAACAAAGAAACCCAAAATGTTCTGGGAGATaGAGCAGCTGGTCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: FNFPIAHLSRFFSQQRNPKCSGR*SSWSLV
Trigger: CACAAGGGACCAGCTGCTGCATCTCCCAGAACATTT...TGGGTTTCTTTGTTGACTGAAAAAGCGAGAAAGGTGAGCTATTGGGAAATTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637289.1
CDS-3UTR GCA 90 bp ACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACAAAATGTTCTGGGAGATaGAGCAGCTGGTCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: TDCFLNCRSHGNIHFCSTKCSGR*SSWSLV
Trigger: CACAAGGGACCAGCTGCTGCATCTCCCAGAACATTT...TGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000637289.1
ENST00000647536.1
CDS-3UTR GCA 90 bp ACCTTTCTCGCTTTTTCAGTCAACAAAGAAACCCAAAGCACAAAAGCCAGCCTCAGCCAGGATCACTTTTaGATCATGCAATTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: TFLAFSVNKETQSTKASLSQDHF*IMQFSN
Trigger: GTTGGAAAATTGCATGATGCAAAAGTGATCCTGGCT...GAGGCTGGCTTTTGTGCTTTGGGTTTCTTTGTTGACTGAAAAAGCGAGAAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000637289.1
CDS-3UTR GCA 90 bp GACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTTTCAGAGGCGGCTGTaGAGTTCTGCTAATGAAGGC +
Preference number: 4 (lower is better)
Translates to: DCFLNCRSHGNIHFCSTSFQRRL*SSANEG
Trigger: GCCTTCATTAGCAGAACTGCACAGCCGCCTCTGAAA...AGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR GCA 90 bp TTTAATTTCCCAATAGCTCACCTTTCTCGCTTTTTCAGTCAACAAAGAAACCCATCAAGCGGTGGCTTCTaGTGGGACATACATAAGCCT +
Preference number: 4 (lower is better)
Translates to: FNFPIAHLSRFFSQQRNPSSGGF*WDIHKP
Trigger: AGGCTTATGTATGTCCCAGCAGAAGCCACCGCTTGA...TGGGTTTCTTTGTTGACTGAAAAAGCGAGAAAGGTGAGCTATTGGGAAATTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp ACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATGCAGTTGTCCTCCCTaGATTTTCACGAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: TDCFLNCRSHGNIHFCSTCSCPP*IFTSAQ
Trigger: CTGTGCACTCGTGAAAATGCAGGGAGGACAACTGCA...TGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp AACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCTCTCTGGATCAGCATATATaGTTATGCCTCTTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: NCRSHGNIHFCSTSSSRSLDQHI*LCLFLL
Trigger: CAGCAAAAAGAGGCATAACCATATATGCTGATCCAG...AGAGCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp ACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACACCTCAGCAGGCTGTATaGGGTCGTAACAATCACATC +
Preference number: 4 (lower is better)
Translates to: TDCFLNCRSHGNIHFCSTPQQAV*GRNNHI
Trigger: GATGTGATTGTTACGACCCCATACAGCCTGCTGAGG...TGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp TGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCTGTGTGGAAATGTTCTaGGAGATGCAGCAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: CFLNCRSHGNIHFCSTSSCVEMF*EMQQLV
Trigger: GACCAGCTGCTGCATCTCCCAGAACATTTCCACACA...GGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000637289.1
ENST00000647536.1
CDS-3UTR CCA 90 bp TTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCCAATGCCCATGCCCATaGACAAAATTTCAGCTCGAA +
Preference number: 4 (lower is better)
Translates to: FLTVGHMAISIFVQHLPAQCPCP*TKFQLE
Trigger: TTCGAGCTGAAATTTTGTCCATGGGCATGGGCATTG...GGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000637289.1
ENST00000647536.1
CDS-3UTR CCA 90 bp CAGTTGTCCTCCCTGCATTTTCACGAGTGCACAGGAAACACATTGTCACTAGCTTTTCTAATCACACATTaGCAGTCATCTTTCCTTATG +
Preference number: 4 (lower is better)
Translates to: QLSSLHFHECTGNTLSLAFLITH*QSSFLM
Trigger: CATAAGGAAAGATGACTGCCAATGTGTGATTAGAAA...AGCTAGTGACAATGTGTTTCCTGTGCACTCGTGAAAATGCAGGGAGGACAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR TCA 90 bp AACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCTCTATTGAAGGAGGGTGCTaGTTTTATATTCAATCTTGG +
Preference number: 4 (lower is better)
Translates to: NCRSHGNIHFCSTSSSRSIEGGC*FYIQSW
Trigger: CCAAGATTGAATATAAAATCAGCACCCTCCTTCAAT...AGAGCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR TCA 90 bp TTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCTTTCACAGTGAGAAATaGCAACCACATCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: FLNCRSHGNIHFCSTSSSFHSEK*QPHHSH
Trigger: GTGGCTGTGATGTGGTTGTCATTTCTCACTGTGAAA...GCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR TCA 90 bp CTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCAGGGCTAATATAATTTaGGAGCCAGAACTTAACTTC +
Preference number: 4 (lower is better)
Translates to: LNCRSHGNIHFCSTSSSRRANII*EPELNF
Trigger: GAAGTTAAGTTCTGGCTCTCAAATTATATTAGCCCT...GCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR TCA 90 bp TTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCACCAAAAACTTTTGGTaGGGCAGGGAAACTGAAGTG +
Preference number: 4 (lower is better)
Translates to: FLNCRSHGNIHFCSTSSSTKNFW*GRETEV
Trigger: CACTTCAGTTTCCCTGCCTCACCAAAAGTTTTTGGT...GCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR TCA 90 bp GACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTCCCCACAGGCCCTTGTaGATTTCCACTAAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: DCFLNCRSHGNIHFCSTSPHRPL*ISTKKQ
Trigger: TTGCTTTTTAGTGGAAATTCACAAGGGCCTGTGGGG...AGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR GCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCTGGCCAGAGTGTAAGTaGTGGATTGAGTTTATTGAA +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPIWPECK*WIEFIE
Trigger: TTCAATAAACTCAATCCAGCACTTACACTCTGGCCA...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR GCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCATGTTGCAGAGATTGTaGCGGAAAATTTACACCATG +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPIMLQRL*RKIYTM
Trigger: CATGGTGTAAATTTTCCGGCACAATCTCTGCAACAT...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR GCA 90 bp TTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCTTGCACCATGTATGTTaGAGAGATTGTGCCGGAAAA +
Preference number: 4 (lower is better)
Translates to: FLTVGHMAISIFVQHLPALHHVC*RDCAGK
Trigger: TTTTCCGGCACAATCTCTGCAACATACATGGTGCAA...GGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR GCA 90 bp GACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTCTACCTGTTGGACATTaGCATAGAGAGCAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: DCFLNCRSHGNIHFCSTSLPVGH*HREQPL
Trigger: AAGAGGCTGCTCTCTATGGCAATGTCCAACAGGTAG...AGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR GCA 90 bp CTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCGAAAGGTTTGTAATGTaGACCATTGGATCAATCCAA +
Preference number: 4 (lower is better)
Translates to: LNCRSHGNIHFCSTSSSRERFVM*TIGSIQ
Trigger: TTGGATTGATCCAATGGTGCACATTACAAACCTTTC...GCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637289.1
ENST00000647536.1
CDS-3UTR GCA 90 bp ACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACACATCCTCTGAAGTGCTaGTACTGTCTTCAACCACCT +
Preference number: 4 (lower is better)
Translates to: TDCFLNCRSHGNIHFCSTHPLKC*YCLQPP
Trigger: AGGTGGTTGAAGACAGTAGCAGCACTTCAGAGGATG...TGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR GCA 90 bp GTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTCGTCATCCTCTGAAGTaGTGCTACTGTCTTCAACCA +
Preference number: 4 (lower is better)
Translates to: VMTDCFLNCRSHGNIHFCRHPLK*CYCLQP
Trigger: TGGTTGAAGACAGTAGCAGCACTTCAGAGGATGACG...ACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR GCA 90 bp TTGGTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTACTGACTCCAGACAGTaGATTTCATCACCCAGATGC +
Preference number: 4 (lower is better)
Translates to: LVMTDCFLNCRSHGNIHFTDSRQ*ISSPRC
Trigger: GCATCTGGGTGATGAAATGCACTGTCTGGAGTCAGT...AAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp GTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTCATTCTGCCAGGTACTaGTCTGCGGAAGACGTAATT +
Preference number: 4 (lower is better)
Translates to: VMTDCFLNCRSHGNIHFCHSARY*SAEDVI
Trigger: AATTACGTCTTCCGCAGACCAGTACCTGGCAGAATG...ACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp GACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTAATCTGGCTTCCACCTaGGTAGTTGCTTTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: DCFLNCRSHGNIHFCSTSNLAST*VVAFRR
Trigger: CCTTCTGAAAGCAACTACCCAGGTGGAAGCCAGATT...AGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCCCAGAGTGTAAGTGCTaGATTGAGTTTATTGAAGGA +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPIPECKC*IEFIEG
Trigger: TCCTTCAATAAACTCAATCCAGCACTTACACTCTGG...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR CCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCCTGGATCAGCATATATaGTTATGCCTCTTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPILDQHI*LCLFLL
Trigger: CAGCAAAAAGAGGCATAACCATATATGCTGATCCAG...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR CCA 90 bp GACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTAGCTTCTGCAACTGCTaGAGATCAGAGATTCCGTCA +
Preference number: 4 (lower is better)
Translates to: DCFLNCRSHGNIHFCSTSSFCNC*RSEIPS
Trigger: TGACGGAATCTCTGATCTCCAGCAGTTGCAGAAGCT...AGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp TGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAAGATTCAGTGTGGCTaGGGCCCGGAAACTTATTTC +
Preference number: 4 (lower is better)
Translates to: CFLNCRSHGNIHFCSTSSKIQCG*GPETYF
Trigger: GAAATAAGTTTCCGGGCCCCAGCCACACTGAATCTT...GGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp GTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTCAGGATGAAGAGGCCTaGAGGACATGCTATATTCTC +
Preference number: 4 (lower is better)
Translates to: VMTDCFLNCRSHGNIHFCQDEEA*RTCYIL
Trigger: GAGAATATAGCATGTCCTCCAGGCCTCTTCATCCTG...ACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp GTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTAAAAGCCTTCAGATATaGACAAAGAGGCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: VMTDCFLNCRSHGNIHFCKSLQI*TKRPSG
Trigger: GCCGGAAGGCCTCTTTGTCCATATCTGAAGGCTTTT...ACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR TCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCATTGAAGGAGGGTGCTaGTTTTATATTCAATCTTGG +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPIIEGGC*FYIQSW
Trigger: CCAAGATTGAATATAAAATCAGCACCCTCCTTCAAT...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR TCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCGAATCTTCCATTCCTTaGACATCTTTTCCTTGCAAA +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPIESSIP*TSFPCK
Trigger: TTTGCAAGGAAAAGATGTTCAAGGAATGGAAGATTC...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR TCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCTTCTCATTTGACTTCTaGCTTAAAGCACTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPIFSFDF*LKALAS
Trigger: AGAAGCAAGTGCTTTAAGTCAGAAGTCAAATGAGAA...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR TCA 90 bp TGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCTCCTGCCTTCATCGATaGACTCTACAAGGATGTCAT +
Preference number: 4 (lower is better)
Translates to: CFLNCRSHGNIHFCSTSSSCLHR*TLQGCH
Trigger: ATGACATCCTTGTAGAGTTCATCGATGAAGGCAGGA...GGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000637289.1
ENST00000647536.1
CDS-3UTR TCA 90 bp ACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTCTTTGGCCAGAGTaGTTACAGGTTCATCGTTTC +
Preference number: 4 (lower is better)
Translates to: TDCFLNCRSHGNIHFCSTSLWPE*LQVHRF
Trigger: GAAACGATGAACCTGTAATCACTCTGGCCAAAGAGA...TGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR TCA 90 bp TTGGTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTCACAGTCTTCCCAGTaGTCAAAATCAAAAGCCACG +
Preference number: 4 (lower is better)
Translates to: LVMTDCFLNCRSHGNIHFSQSSQ*SKSKAT
Trigger: CGTGGCTTTTGATTTTGATCACTGGGAAGACTGTGA...AAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000647536.1
CDS-3UTR GCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCCTATATCTTGACACGTaGTGTTGTAGAAGTCATTCA +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPILYLDT*CCRSHS
Trigger: TGAATGACTTCTACAACAGCACGTGTCAAGATATAG...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR GCA 90 bp TTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCATGTTGCAGAGATTGTaGCGGAAAATTTACACCATG +
Preference number: 4 (lower is better)
Translates to: FLTVGHMAISIFVQHLPAMLQRL*RKIYTM
Trigger: CATGGTGTAAATTTTCCGGCACAATCTCTGCAACAT...GGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR GCA 90 bp TCACGAGTGCACAGGAAACACATTGTCACTAGCTATTATCATTTGCTGTGCTGTGAAAGGTTTGTAATGTaGACCATTGGATCAATCCAA +
Preference number: 4 (lower is better)
Translates to: SRVHRKHIVTSYYHLLCCERFVM*TIGSIQ
Trigger: TTGGATTGATCCAATGGTGCACATTACAAACCTTTC...ACAGCACAGCAAATGATAATAGCTAGTGACAATGTGTTTCCTGTGCACTCGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637289.1
CDS-3UTR GCA 90 bp TTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGATTATCAATGCCCATaGCCATGGACAAAATTTCAG +
Preference number: 4 (lower is better)
Translates to: FLTVGHMAISIFVQHLPADYQCP*PWTKFQ
Trigger: CTGAAATTTTGTCCATGGGCATGGGCATTGATAATC...GGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000637289.1
ENST00000647536.1
CDS-3UTR CCA 90 bp TTGGTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTCATTGTCCCACTTCTTaGCAGGTACAATGTCAGTAC +
Preference number: 4 (lower is better)
Translates to: LVMTDCFLNCRSHGNIHFHCPTS*QVQCQY
Trigger: GTACTGACATTGTACCTGCCAAGAAGTGGGACAATG...AAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCTGCTTCTGGTACATCTaGATCAGCATATATGGTTAT +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPICFWYI*ISIYGY
Trigger: ATAACCATATATGCTGATCCAGATGTACCAGAAGCA...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR CCA 90 bp TGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCCACATCACAGCCCCTTaGAAGCTTTGTATTTTTGGC +
Preference number: 4 (lower is better)
Translates to: CFLNCRSHGNIHFCSTSSHITAP*KLCIFG
Trigger: GCCAAAAATACAAAGCTTCCAAGGGGCTGTGATGTG...GGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp TTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCGCAGCAAGACAGATTTaGCTTTCTTATCTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: FLNCRSHGNIHFCSTSSSAARQI*LSYLPV
Trigger: AACAGGGAGATAAGAAAGCCAAATCTGTCTTGCTGC...GCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp GTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTCTTTCTTATCTTCTTTaGCTTCCAGAACTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: VMTDCFLNCRSHGNIHFCLSYLL*LPELLR
Trigger: CCGCAGGAGTTCTGGAAGCCAAAGAAGATAAGAAAG...ACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp TTGGTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTGCTTTCTTCACAAGCTaGTATCTTAGCATCTTCGCG +
Preference number: 4 (lower is better)
Translates to: LVMTDCFLNCRSHGNIHFAFFTS*YLSIFA
Trigger: CGCGAAGATGCTAAGATACCAGCTTGTGAAGAAAGC...AAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR CCA 90 bp TGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCGCTTTCTTCACAAGCTaGTATCTTAGCATCTTCGCG +
Preference number: 4 (lower is better)
Translates to: CFLNCRSHGNIHFCSTSSAFFTS*YLSIFA
Trigger: CGCGAAGATGCTAAGATACCAGCTTGTGAAGAAAGC...GGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR CCA 90 bp TTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCAAAGTTTCAGGCTTCTaGTTTTCTGAGCTCGTCTTG +
Preference number: 4 (lower is better)
Translates to: FLNCRSHGNIHFCSTSSSKVSGF*FSELVL
Trigger: CAAGACGAGCTCAGAAAACCAGAAGCCTGAAACTTT...GCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR CCA 90 bp TTGGTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTATTGATCTTATTAACTaGGTAAGGGACGCCGACTCC +
Preference number: 4 (lower is better)
Translates to: LVMTDCFLNCRSHGNIHFIDLIN*VRDADS
Trigger: GGAGTCGGCGTCCCTTACCCAGTTAATAAGATCAAT...AAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564769.2
CDS-3UTR TCA 90 bp TTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCATATGTTTGTTCCAATaGACTCCAACTGCAACAATC +
Preference number: 4 (lower is better)
Translates to: FLTVGHMAISIFVQHLPAICLFQ*TPTATI
Trigger: GATTGTTGCAGTTGGAGTTCATTGGAACAAACATAT...GGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR GCA 90 bp TTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCTGGCCAGAGTGTAAGTaGTGGATTGAGTTTATTGAA +
Preference number: 4 (lower is better)
Translates to: FLNCRSHGNIHFCSTSSSWPECK*WIEFIE
Trigger: TTCAATAAACTCAATCCAGCACTTACACTCTGGCCA...GCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR GCA 90 bp GTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTCAGCATATATGGTTATaGCTCTTTTTGCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: VMTDCFLNCRSHGNIHFCQHIWL*LFLLAS
Trigger: ACTGGCCAGCAAAAAGAGGCATAACCATATATGCTG...ACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR GCA 90 bp TTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGATCAAGGTCTTTTGTaGCTGACTTGGAATAAAATC +
Preference number: 4 (lower is better)
Translates to: FLTVGHMAISIFVQHLPADQGLL*LTWNKI
Trigger: GATTTTATTCCAAGTCAGGCACAAAAGACCTTGATC...GGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR GCA 90 bp TTGGTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTGAAAATGATCAGACATaGAATACAGGCGTCCACCAA +
Preference number: 4 (lower is better)
Translates to: LVMTDCFLNCRSHGNIHFENDQT*NTGVHQ
Trigger: TTGGTGGACGCCTGTATTGCATGTCTGATCATTTTC...AAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR GCA 90 bp TTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCAGCCAGGATCACTTTTaGATCATGCAATTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: FLNCRSHGNIHFCSTSSSSQDHF*IMQFSN
Trigger: GTTGGAAAATTGCATGATGCAAAAGTGATCCTGGCT...GCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000637289.1
ENST00000647536.1
CDS-3UTR GCA 90 bp TGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCCTGCATTTTCACGAGTaGACAGGAAACACATTGTCA +
Preference number: 4 (lower is better)
Translates to: CFLNCRSHGNIHFCSTSSLHFHE*TGNTLS
Trigger: TGACAATGTGTTTCCTGTGCACTCGTGAAAATGCAG...GGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CCA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCGTTTTTAGATTTGACTaGAATGTTCTTGGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPIVFRFD*NVLGKV
Trigger: GACTTTGCCAAGAACATTCCAGTCAAATCTAAAAAC...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR CCA 90 bp TTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCTGCTTCTGGTACATCTaGATCAGCATATATGGTTAT +
Preference number: 4 (lower is better)
Translates to: FLTVGHMAISIFVQHLPACFWYI*ISIYGY
Trigger: ATAACCATATATGCTGATCCAGATGTACCAGAAGCA...GGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp TTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCTTGGCTTCCTCTTTATaGAGCCCAATTGTTAATAGC +
Preference number: 4 (lower is better)
Translates to: FLNCRSHGNIHFCSTSSSLASSL*SPIVNS
Trigger: GCTATTAACAATTGGGCTCCATAAAGAGGAAGCCAA...GCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp TTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCAAACATCTGTTCATTaGCTTCCAAGAATAGCACCT +
Preference number: 4 (lower is better)
Translates to: FLNCRSHGNIHFCSTSSSQTSVH*LPRIAP
Trigger: AGGTGCTATTCTTGGAAGCCAATGAACAGATGTTTG...GCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp TTGGTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGCAACAATCTGATGTaGTGCAGATTCCCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LVMTDCFLNCRSHGNIHFCNNLM*CRFPFF
Trigger: GAAGAAAGGGAATCTGCACCACATCAGATTGTTGCA...AAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR GCA 90 bp GTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTAACAATCTGATGTGGTaGAGATTCCCTTTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: VMTDCFLNCRSHGNIHFCNNLMW*RFPFFN
Trigger: GTTGAAGAAAGGGAATCTGCACCACATCAGATTGTT...ACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR GCA 90 bp GTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTTATTGATGATACACTaGGGAAGACATCCATACCAC +
Preference number: 4 (lower is better)
Translates to: VMTDCFLNCRSHGNIHFCLLMIH*GRHPYH
Trigger: GTGGTATGGATGTCTTCCGCAGTGTATCATCAATAA...ACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564769.2
CDS-3UTR CCA 90 bp GTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTCCAGAGTGTAAGTGCTaGATTGAGTTTATTGAAGGA +
Preference number: 4 (lower is better)
Translates to: VMTDCFLNCRSHGNIHFCPECKC*IEFIEG
Trigger: TCCTTCAATAAACTCAATCCAGCACTTACACTCTGG...ACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp TTGGTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTAATTCAAAAATAAATTaGGCCTTCTTCCACCCAGGG +
Preference number: 4 (lower is better)
Translates to: LVMTDCFLNCRSHGNIHFNSKIN*AFFHPG
Trigger: CCCTGGGTGGAAGAAGGCCCAATTTATTTTTGAATT...AAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp AAGATCTTGGGGCCGTCACACAACACTCATGTTCTATCCAAATTCTTTTCCATTTGTAATGTGCACCATTaGATCAATCCAAACTGTATT +
Preference number: 4 (lower is better)
Translates to: KILGPSHNTHVLSKFFSICNVHH*INPNCI
Trigger: AATACAGTTTGGATTGATCCAATGGTGCACATTACA...AATGGAAAAGAATTTGGATAGAACATGAGTGTTGTGTGACGGCCCCAAGATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637289.1
CDS-3UTR TCA 90 bp ACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATTCTCATTTGACTTCTaGCTTAAAGCACTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: TDCFLNCRSHGNIHFCSTFSFDF*LKALAS
Trigger: AGAAGCAAGTGCTTTAAGTCAGAAGTCAAATGAGAA...TGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR TCA 90 bp ACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACAAAGGTCTTTTGTGCCTaGCTTGGAATAAAATCAAGA +
Preference number: 4 (lower is better)
Translates to: TDCFLNCRSHGNIHFCSTKVFCA*LGIKSR
Trigger: TCTTGATTTTATTCCAAGTCAGGCACAAAAGACCTT...TGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR GCA 90 bp TTGGTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTCTATATCTTGACACGTaGTGTTGTAGAAGTCATTCA +
Preference number: 4 (lower is better)
Translates to: LVMTDCFLNCRSHGNIHFLYLDT*CCRSHS
Trigger: TGAATGACTTCTACAACAGCACGTGTCAAGATATAG...AAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CCA 90 bp TTGGTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTAATGTGCACCATTaGATCAATCCAAACTGTATT +
Preference number: 4 (lower is better)
Translates to: LVMTDCFLNCRSHGNIHFCNVHH*INPNCI
Trigger: AATACAGTTTGGATTGATCCAATGGTGCACATTACA...AAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAACCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000637289.1
ENST00000647536.1
CDS-3UTR CCA 90 bp GACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTTTCTAATCACACATTaGCAGTCATCTTTCCTTATG +
Preference number: 4 (lower is better)
Translates to: DCFLNCRSHGNIHFCSTSFLITH*QSSFLM
Trigger: CATAAGGAAAGATGACTGCCAATGTGTGATTAGAAA...AGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS CCA 90 bp CGTCCTGGCAGTAACCAGCCCCTCGCTGCGGGATCCCTGCCTGCCTaGCCTCGGGCCTCCCGCACCCACCGGATGCCCGCGCACGCTGAG +
Preference number: 5 (lower is better)
Translates to: RPGSNQPLAAGSLPA*PRASRTHRMPAHAE
Trigger: CTCAGCGTGCGCGGGCATCCGGTGGGTGCGGGAGGCCCGAGGCCAGGCAGGCAGGGATCCCGCAGCGAGGGGCTGGTTACTGCCAGGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444215.6
CDS CCA 90 bp TGGAGCATCCTCCTGGCGCCCGAGGGCAGATGGGCCCCCTCGCCCTaGAAGTCCCCTACCGTCGCGGGTGAGGCTGGCTGCGTCCGCCCC +
Preference number: 5 (lower is better)
Translates to: WSILLAPEGRWAPSP*KSPTVAGEAGCVRP
Trigger: GGGGCGGACGCAGCCAGCCTCACCCGCGACGGTAGGGGACTTCCAGGGCGAGGGGGCCCATCTGCCCTCGGGCGCCAGGAGGATGCTCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444215.6
CDS CCA 90 bp TTCAGCACCAGGAGCTGGAGCATCCTCCTGGCGCCCGAGGGCAGATaGGCCCCCTCGCCCTGGAAGTCCCCTACCGTCGCGGGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: FSTRSWSILLAPEGR*APSPWKSPTVAGEA
Trigger: AGCCTCACCCGCGACGGTAGGGGACTTCCAGGGCGAGGGGGCCCATCTGCCCTCGGGCGCCAGGAGGATGCTCCAGCTCCTGGTGCTGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444215.6
CDS-3UTR CAA 90 bp GCAGGCAGCTGGTGCGCACGGGGCGCCACTGGACGGCGGCCTGGTCTCTGCCCCCCCACTATCTCATGGTaGAAAGGGCTGGTTCAACAG +
Preference number: 5 (lower is better)
Translates to: AGSWCARGATGRRPGLCPPTISW*KGLVQQ
Trigger: CTGTTGAACCAGCCCTTTCAACCATGAGATAGTGGG...GGGGCAGAGACCAGGCCGCCGTCCAGTGGCGCCCCGTGCGCACCAGCTGCCTGC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS CCA 90 bp AACCTGGATCTTCAATCTTCAGCACCAGGAGCTGGAGCATCCTCCTaGCGCCCGAGGGCAGATGGGCCCCCTCGCCCTGGAAGTCCCCTA +
Preference number: 5 (lower is better)
Translates to: NLDLQSSAPGAGASS*RPRADGPPRPGSPL
Trigger: TAGGGGACTTCCAGGGCGAGGGGGCCCATCTGCCCTCGGGCGCCAGGAGGATGCTCCAGCTCCTGGTGCTGAAGATTGAAGATCCAGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS-3UTR CAA 90 bp GCAGGCAGCTGGTGCGCACGGGGCGCCACTGGACGGCGGCCTGGTCTCTGCCCCAAGCCAGGATCACTTTaGCATCATGCAATTTTCCAA +
Preference number: 5 (lower is better)
Translates to: AGSWCARGATGRRPGLCPKPGSL*HHAIFQ
Trigger: TTGGAAAATTGCATGATGCAAAAGTGATCCTGGCTT...GGGGCAGAGACCAGGCCGCCGTCCAGTGGCGCCCCGTGCGCACCAGCTGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637289.1
CDS GCA 90 bp ATCTTCTTTGGCTTCCAGAACTCCTGCGGTGAACTCGTACAGCTCTaGGGGGACCTTGGCGTCCGCTCGCTCCAAGTAGCGCAGGACGCC +
Preference number: 5 (lower is better)
Translates to: IFFGFQNSCGELVQL*GDLGVRSLQVAQDA
Trigger: GGCGTCCTGCGCTACTTGGAGCGAGCGGACGCCAAGGTCCCCGCAGAGCTGTACGAGTTCACCGCAGGAGTTCTGGAAGCCAAAGAAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS TCA 90 bp TCAGGTCTGCTGACAGCGGCGACGAGTCAATGGTTAAGCAGGGCTTaGTCTTGTTCCGGAGCACTACCACGGGCGGCTGCAGGCCCTTCA +
Preference number: 5 (lower is better)
Translates to: SGLLTAATSQWLSRA*SCSGALPRAAAGPS
Trigger: TGAAGGGCCTGCAGCCGCCCGTGGTAGTGCTCCGGAACAAGATCAAGCCCTGCTTAACCATTGACTCGTCGCCGCTGTCAGCAGACCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS-3UTR CAA 90 bp GGCGAGAGGCGCCAGACAGGACAGACAAGCCGGCGGAATCAGACCACACCTGCTGAGGTAAAGAAAGATTaGGTTGGCCGGGTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: GERRQTGQTSRRNQTTPAEVKKD*VGRVWW
Trigger: CCACCACACCCGGCCAACCAAATCTTTCTTTACCTC...AGCAGGTGTGGTCTGATTCCGCCGGCTTGTCTGTCCTGTCTGGCGCCTCTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CAA 90 bp AGAGACTCGGCGCACCTGGGTGTAAACAGCAGGCAGCTGGTGCGCACGGGGCGCGATCTAAGCATGCAGTaGTCCTCCCTGCATTTTCAC +
Preference number: 5 (lower is better)
Translates to: RDSAHLGVNSRQLVRTGRDLSMQ*SSLHFH
Trigger: GTGAAAATGCAGGGAGGACAACTGCATGCTTAGATC...GCGCCCCGTGCGCACCAGCTGCCTGCTGTTTACACCCAGGTGCGCCGAGTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS TCA 90 bp GCCTTCCGGCTTTCTTATCTTCTTTGGCTTCCAGAACTCCTGCGGTaGACTCGTACAGCTCTGCGGGGACCTTGGCGTCCGCTCGCTCCA +
Preference number: 5 (lower is better)
Translates to: AFRLSYLLWLPELLR*TRTALRGPWRPLAP
Trigger: TGGAGCGAGCGGACGCCAAGGTCCCCGCAGAGCTGTACGAGTTCACCGCAGGAGTTCTGGAAGCCAAAGAAGATAAGAAAGCCGGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS CCA 90 bp GCCTGCGGGGGAAGTGTGTGGAAATGTTCTGGGAGATGCAGCAGCTaGTCCCTTGTGACGAGCCCCGTCCTGCCTTCATCGATGAACTCT +
Preference number: 5 (lower is better)
Translates to: ACGGSVWKCSGRCSS*SLVTSPVLPSSMNS
Trigger: AGAGTTCATCGATGAAGGCAGGACGGGGCTCGTCACAAGGGACCAGCTGCTGCATCTCCCAGAACATTTCCACACACTTCCCCCGCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000444215.6
ENST00000637289.1
ENST00000647536.1
CDS TCA 90 bp CCAAGAATAGCACCTCTACCTCATCCAGGATCAGGTGGCAGAGCCTaGGGAACAGCAGGCTCTGACAGGCGAGAAGCCTCAGCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: PRIAPLPHPGSGGRA*GTAGSDRREASAGC
Trigger: ACAGCCTGCTGAGGCTTCTCGCCTGTCAGAGCCTGCTGTTCCTCAGGCTCTGCCACCTGATCCTGGATGAGGTAGAGGTGCTATTCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS GCA 90 bp GTTAAGCAGGGCTTGATCTTGTTCCGGAGCACTACCACGGGCGGCTaGAGGCCCTTCAGCTTCTGCAACTGCTGGAGATCAGAGATTCCG +
Preference number: 5 (lower is better)
Translates to: VKQGLILFRSTTTGG*RPFSFCNCWRSEIP
Trigger: CGGAATCTCTGATCTCCAGCAGTTGCAGAAGCTGAAGGGCCTGCAGCCGCCCGTGGTAGTGCTCCGGAACAAGATCAAGCCCTGCTTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS GCA 90 bp AAGAGGCCTTCCGGCTTTCTTATCTTCTTTGGCTTCCAGAACTCCTaGGGTGAACTCGTACAGCTCTGCGGGGACCTTGGCGTCCGCTCG +
Preference number: 5 (lower is better)
Translates to: KRPSGFLIFFGFQNS*GELVQLCGDLGVRS
Trigger: CGAGCGGACGCCAAGGTCCCCGCAGAGCTGTACGAGTTCACCGCAGGAGTTCTGGAAGCCAAAGAAGATAAGAAAGCCGGAAGGCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS-3UTR CAA 90 bp GCAGCCACAATGCAGATGGGGTGGCGAATGTCTGCAGGGCTCACGACATGTAGGTTTTCTGAGCTCGTCTaGGACTCAGCCCCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: AATMQMGWRMSAGLTTCRFSELV*DSAPPS
Trigger: AGAAGGAGGGGCTGAGTCCAAGACGAGCTCAGAAAA...CCTACATGTCGTGAGCCCTGCAGACATTCGCCACCCCATCTGCATTGTGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CAA 90 bp AGGCGCCAGACAGGACAGACAAGCCGGCGGAATCAGACCACACCTGCTGTTTCTGAGGTAAAGAAAGATTaGGTTGGCCGGGTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: RRQTGQTSRRNQTTPAVSEVKKD*VGRVWW
Trigger: CCACCACACCCGGCCAACCAAATCTTTCTTTACCTC...AGAAACAGCAGGTGTGGTCTGATTCCGCCGGCTTGTCTGTCCTGTCTGGCGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CAA 90 bp AGGCGCCAGACAGGACAGACAAGCCGGCGGAATCAGACCACACCTGCTGTTTCTTGTGTCCACCCTCCTTaGATGGTCTTATCATCAGCC +
Preference number: 5 (lower is better)
Translates to: RRQTGQTSRRNQTTPAVSCVHPP*MVLSSA
Trigger: GGCTGATGATAAGACCATCAAAGGAGGGTGGACACA...AGAAACAGCAGGTGTGGTCTGATTCCGCCGGCTTGTCTGTCCTGTCTGGCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS CCA 90 bp TTCACCCTACAGACAATAAACTCCACAGCCTGCGGGGGAAGTGTGTaGAAATGTTCTGGGAGATGCAGCAGCTGGTCCCTTGTGACGAGC +
Preference number: 5 (lower is better)
Translates to: FTLQTINSTACGGSV*KCSGRCSSWSLVTS
Trigger: GCTCGTCACAAGGGACCAGCTGCTGCATCTCCCAGAACATTTCCACACACTTCCCCCGCAGGCTGTGGAGTTTATTGTCTGTAGGGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000444215.6
ENST00000637289.1
ENST00000647536.1
CDS TCA 90 bp TACAGGCGTCCACCAAAAACTTTTGGTGAGGCAGGGAAACTGAAGTaGATCACACACGTGGCATCGGTGATGGCCAAGAGTGGGACGCAG +
Preference number: 5 (lower is better)
Translates to: YRRPPKTFGEAGKLK*ITHVASVMAKSGTQ
Trigger: CTGCGTCCCACTCTTGGCCATCACCGATGCCACGTGTGTGATTCACTTCAGTTTCCCTGCCTCACCAAAAGTTTTTGGTGGACGCCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS CCA 90 bp CACAGCCACGCGCTATGGGAGGCCAAGAGTAAGATTCAGTGTGGCTaGGGCCCGGAAACTTATTTCTTTGAAGAGCCTTCTTCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: HSHALWEAKSKIQCG*GPETYFFEEPSSGL
Trigger: CAGACCTGAAGAAGGCTCTTCAAAGAAATAAGTTTCCGGGCCCCAGCCACACTGAATCTTACTCTTGGCCTCCCATAGCGCGTGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS-3UTR CAA 90 bp TTTGCTGTGCTGTATGAAAGAGACTCGGCGCACCTGGGTGTAAACAGCAGGCAGCCTTCATGGGCTGATTaGATACCTGCCAGTCACCCT +
Preference number: 5 (lower is better)
Translates to: FAVLYERDSAHLGVNSRQPSWAD*IPASHP
Trigger: AGGGTGACTGGCAGGTATCAAATCAGCCCATGAAGG...CTGCCTGCTGTTTACACCCAGGTGCGCCGAGTCTCTTTCATACAGCACAGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CAA 90 bp TGCAGATGGGGTGGCGAATGTCTGCAGGGCTCACGACATGTAGGCATTCAAAGATCATCTTTCCTTATGTaGCCCCGCAGCTCCAGATCA +
Preference number: 5 (lower is better)
Translates to: CRWGGECLQGSRHVGIQRSSFLM*PRSSRS
Trigger: TGATCTGGAGCTGCGGGGCAACATAAGGAAAGATGA...TCTTTGAATGCCTACATGTCGTGAGCCCTGCAGACATTCGCCACCCCATCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CAA 90 bp AGGCGCCAGACAGGACAGACAAGCCGGCGGAATCAGACCACACCTGCTGTTTCTACTAAAAAGCAACCTTaGTGCCATTTGCTCAGGACT +
Preference number: 5 (lower is better)
Translates to: RRQTGQTSRRNQTTPAVSTKKQP*CHLLRT
Trigger: AGTCCTGAGCAAATGGCACAAAGGTTGCTTTTTAGT...AGAAACAGCAGGTGTGGTCTGATTCCGCCGGCTTGTCTGTCCTGTCTGGCGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CAA 90 bp ACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACAAGCTCTGCGGGGACCTaGGCGTCCGCTCGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: TDCFLNCRSHGNIHFCSTSSAGT*ASARSK
Trigger: CTTGGAGCGAGCGGACGCCAAGGTCCCCGCAGAGCT...TGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CAA 90 bp TCACTCTCACTGTCGTCATCCTCTGAAGTGCTGCTACTGTCTTCAACCACCTCTTCATCTTTCCTTATGTaGCCCCGCAGCTCCAGATCA +
Preference number: 5 (lower is better)
Translates to: SLSLSSSSEVLLLSSTTSSSFLM*PRSSRS
Trigger: TGATCTGGAGCTGCGGGGCAACATAAGGAAAGATGA...AGAGGTGGTTGAAGACAGTAGCAGCACTTCAGAGGATGACGACAGTGAGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CAA 90 bp CACCTTCTCTTTCACTCTCACTGTCGTCATCCTCTGAAGTGCTGCTACTGTCTTATCTTCCAGCCGCTCTaGAGGACGTCATTCACCTTC +
Preference number: 5 (lower is better)
Translates to: HLLFHSHCRHPLKCCYCLIFQPL*RTSFTF
Trigger: GAAGGTGAATGACGTCCTCAAGAGCGGCTGGAAGAT...AAGACAGTAGCAGCACTTCAGAGGATGACGACAGTGAGAGTGAAAGAGAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CAA 90 bp ACTAGCTATTATCATTTGCTGTGCTGTATGAAAGAGACTCGGCGCACCTGGGTGCCTTCATGGGCTGATTaGATACCTGCCAGTCACCCT +
Preference number: 5 (lower is better)
Translates to: TSYYHLLCCMKETRRTWVPSWAD*IPASHP
Trigger: AGGGTGACTGGCAGGTATCAAATCAGCCCATGAAGG...CACCCAGGTGCGCCGAGTCTCTTTCATACAGCACAGCAAATGATAATAGCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS CCA 90 bp GGAATGTTCTTGGCAAAGTCCACAAGGAAACATTCTGCCAGGTACTaGTCTGCGGAAGACGTAATTGATTTGACAATGGCCCTGCACCAG +
Preference number: 5 (lower is better)
Translates to: GMFLAKSTRKHSARY*SAEDVIDLTMALHQ
Trigger: CTGGTGCAGGGCCATTGTCAAATCAATTACGTCTTCCGCAGACCAGTACCTGGCAGAATGTTTCCTTGTGGACTTTGCCAAGAACATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421545.2
ENST00000444215.6
ENST00000647536.1
CDS-3UTR CAA 90 bp TTTGCTGTGCTGTATGAAAGAGACTCGGCGCACCTGGGTGTAAACAGCAGGCAGTTCCATTCTATTTCGTaGTCAGCAGGTTTCACCCTA +
Preference number: 5 (lower is better)
Translates to: FAVLYERDSAHLGVNSRQFHSIS*SAGFTL
Trigger: TAGGGTGAAACCTGCTGACAACGAAATAGAATGGAA...CTGCCTGCTGTTTACACCCAGGTGCGCCGAGTCTCTTTCATACAGCACAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637289.1
CDS-3UTR CAA 90 bp ACTAGCTATTATCATTTGCTGTGCTGTATGAAAGAGACTCGGCGCACCTGGGTGTGTGTCCACCCTCCTTaGATGGTCTTATCATCAGCC +
Preference number: 5 (lower is better)
Translates to: TSYYHLLCCMKETRRTWVCVHPP*MVLSSA
Trigger: GGCTGATGATAAGACCATCAAAGGAGGGTGGACACA...CACCCAGGTGCGCCGAGTCTCTTTCATACAGCACAGCAAATGATAATAGCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CAA 90 bp CTTTCACTCTCACTGTCGTCATCCTCTGAAGTGCTGCTACTGTCTTCAACCACCGATCTAAGCATGCAGTaGTCCTCCCTGCATTTTCAC +
Preference number: 5 (lower is better)
Translates to: LSLSLSSSSEVLLLSSTTDLSMQ*SSLHFH
Trigger: GTGAAAATGCAGGGAGGACAACTGCATGCTTAGATC...GGTGGTTGAAGACAGTAGCAGCACTTCAGAGGATGACGACAGTGAGAGTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS GCA 90 bp GCTGTTGGCCTGAGGTCACCGACAATACCCTTGCACCATGTATGTTaGAGAGATTGTGCCGGAAAATTTACACCATGTGAATCTTCCATT +
Preference number: 5 (lower is better)
Translates to: AVGLRSPTIPLHHVC*RDCAGKFTPCESSI
Trigger: AATGGAAGATTCACATGGTGTAAATTTTCCGGCACAATCTCTGCAACATACATGGTGCAAGGGTATTGTCGGTGACCTCAGGCCAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421545.2
ENST00000444215.6
ENST00000647536.1
CDS-3UTR CAA 90 bp AACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCTCTCTTGCACCATGTATGTaGCAGAGATTGTGCCGGAAA +
Preference number: 5 (lower is better)
Translates to: NCRSHGNIHFCSTSSSRSLAPCM*QRLCRK
Trigger: TTTCCGGCACAATCTCTGCAACATACATGGTGCAAG...AGAGCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CAA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCTGGTTATGCCTCTTTTaGCTGGCCAGTACACTGAGG +
Preference number: 5 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPIWLCLF*LASTLR
Trigger: CCTCAGTGTACTGGCCAGCAAAAAGAGGCATAACCA...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR CAA 90 bp GAGAAACAGACACTGATATGGGTGTTAGAAGAGCTCCACAGTCAAAACCTTCACAAATCAAAAGCCACGTaGGGGTTCCTCTGTCTGAGT +
Preference number: 5 (lower is better)
Translates to: EKQTLIWVLEELHSQNLHKSKAT*GFLCLS
Trigger: ACTCAGACAGAGGAACCCCAACGTGGCTTTTGATTT...GTGAAGGTTTTGACTGTGGAGCTCTTCTAACACCCATATCAGTGTCTGTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564769.2
CDS-3UTR CAA 90 bp TTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCATCTTCCAGCCGCTCTaGAGGACGTCATTCACCTTC +
Preference number: 5 (lower is better)
Translates to: FLTVGHMAISIFVQHLPAIFQPL*RTSFTF
Trigger: GAAGGTGAATGACGTCCTCAAGAGCGGCTGGAAGAT...GGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR CAA 90 bp TGTCGTCATCCTCTGAAGTGCTGCTACTGTCTTCAACCACCTCTGTCACTGTGTAAAATAATAAAGATCTaGGGGCCGTCACACAACACT +
Preference number: 5 (lower is better)
Translates to: CRHPLKCCYCLQPPLSLCKIIKI*GPSHNT
Trigger: AGTGTTGTGTGACGGCCCCAAGATCTTTATTATTTT...ACACAGTGACAGAGGTGGTTGAAGACAGTAGCAGCACTTCAGAGGATGACGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CAA 90 bp TTCAGTCAACAAAGAAACCCAAAGCACAAAAGCCAGCCTCTGGGTGTGGCCATGTTGGAACCATTTTATTaGTGGGTGGAAGCTTTTCAG +
Preference number: 5 (lower is better)
Translates to: FSQQRNPKHKSQPLGVAMLEPFY*WVEAFQ
Trigger: CTGAAAAGCTTCCACCCACAAATAAAATGGTTCCAA...CATGGCCACACCCAGAGGCTGGCTTTTGTGCTTTGGGTTTCTTTGTTGACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637289.1
CDS-3UTR CAA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCGAAGACGTAATTGATTaGACAATGGCCCTGCACCAG +
Preference number: 5 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPIEDVID*TMALHQ
Trigger: CTGGTGCAGGGCCATTGTCAAATCAATTACGTCTTC...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR CAA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCGCATTGTCCCACTTCTaGGCAGGTACAATGTCAGTA +
Preference number: 5 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPIALSHF*AGTMSV
Trigger: TACTGACATTGTACCTGCCAAGAAGTGGGACAATGC...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR CAA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCCTTGCACCATGTATGTaGCAGAGATTGTGCCGGAAA +
Preference number: 5 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPILAPCM*QRLCRK
Trigger: TTTCCGGCACAATCTCTGCAACATACATGGTGCAAG...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR CAA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCTCACCGACAATACCCTaGCACCATGTATGTTGCAGA +
Preference number: 5 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPISPTIP*HHVCCR
Trigger: TCTGCAACATACATGGTGCAAGGGTATTGTCGGTGA...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR CAA 90 bp ACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACAAAGCAGGGCTTGATCTaGTTCCGGAGCACTACCACG +
Preference number: 5 (lower is better)
Translates to: TDCFLNCRSHGNIHFCSTKQGLI*FRSTTT
Trigger: CGTGGTAGTGCTCCGGAACAAGATCAAGCCCTGCTT...TGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CAA 90 bp CTTTCACTCTCACTGTCGTCATCCTCTGAAGTGCTGCTACTGTCTTCAACCACCGACGACATCTTCTTTTaGGAACCATTTTATTTGTGG +
Preference number: 5 (lower is better)
Translates to: LSLSLSSSSEVLLLSSTTDDIFF*EPFYLW
Trigger: CCACAAATAAAATGGTTCCAAAAAGAAGATGTCGTC...GGTGGTTGAAGACAGTAGCAGCACTTCAGAGGATGACGACAGTGAGAGTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CAA 90 bp AAGATCTTGGGGCCGTCACACAACACTCATGTTCTATCCAAATTCTTTTCCATTCCCACTATCTCATGGTaGAAAGGGCTGGTTCAACAG +
Preference number: 5 (lower is better)
Translates to: KILGPSHNTHVLSKFFSIPTISW*KGLVQQ
Trigger: CTGTTGAACCAGCCCTTTCAACCATGAGATAGTGGG...AATGGAAAAGAATTTGGATAGAACATGAGTGTTGTGTGACGGCCCCAAGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CAA 90 bp AACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCTCTGCTGGATTGAGTTTATaGAAGGAGGGTGCTGATTTT +
Preference number: 5 (lower is better)
Translates to: NCRSHGNIHFCSTSSSRSAGLSL*KEGADF
Trigger: AAAATCAGCACCCTCCTTCAATAAACTCAATCCAGC...AGAGCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CAA 90 bp AACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCTCTTTACATTTTACAGCTTaGTCCTGTGCTGTGGCTGTT +
Preference number: 5 (lower is better)
Translates to: NCRSHGNIHFCSTSSSRSLHFTA*SCAVAV
Trigger: AACAGCCACAGCACAGGACAAAGCTGTAAAATGTAA...AGAGCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CAA 90 bp AACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCTCTTCTGACTTAAAGCACTaGCTTCTGGTACATCTGGAT +
Preference number: 5 (lower is better)
Translates to: NCRSHGNIHFCSTSSSRSSDLKH*LLVHLD
Trigger: ATCCAGATGTACCAGAAGCAAGTGCTTTAAGTCAGA...AGAGCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CAA 90 bp GACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTTTTCTGAGCTCGTCTaGGACTCAGCCCCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: DCFLNCRSHGNIHFCSTSFSELV*DSAPPS
Trigger: AGAAGGAGGGGCTGAGTCCAAGACGAGCTCAGAAAA...AGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR CAA 90 bp ACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATTTTCTGAGCTCGTCTaGGACTCAGCCCCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: TDCFLNCRSHGNIHFCSTFSELV*DSAPPS
Trigger: AGAAGGAGGGGCTGAGTCCAAGACGAGCTCAGAAAA...TGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR CAA 90 bp TTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCTCATCTTTCCTTATGTaGCCCCGCAGCTCCAGATCA +
Preference number: 5 (lower is better)
Translates to: FLNCRSHGNIHFCSTSSSSSFLM*PRSSRS
Trigger: TGATCTGGAGCTGCGGGGCAACATAAGGAAAGATGA...GCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR CAA 90 bp TTGGTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTATCTTCCAGCCGCTCTaGAGGACGTCATTCACCTTC +
Preference number: 5 (lower is better)
Translates to: LVMTDCFLNCRSHGNIHFIFQPL*RTSFTF
Trigger: GAAGGTGAATGACGTCCTCAAGAGCGGCTGGAAGAT...AAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR CAA 90 bp TGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCCAACCTTTGTGCCATTaGCTCAGGACTCTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: CFLNCRSHGNIHFCSTSSQPLCH*LRTLQV
Trigger: GACCTGCAGAGTCCTGAGCAAATGGCACAAAGGTTG...GGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CAA 90 bp ACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACACAACCTTTGTGCCATTaGCTCAGGACTCTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: TDCFLNCRSHGNIHFCSTQPLCH*LRTLQV
Trigger: GACCTGCAGAGTCCTGAGCAAATGGCACAAAGGTTG...TGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CAA 90 bp CAGTTGTCCTCCCTGCATTTTCACGAGTGCACAGGAAACACATTGTCACTAGCTTGCACAGGAAACACATaGTCACTAGCTATTATCATT +
Preference number: 5 (lower is better)
Translates to: QLSSLHFHECTGNTLSLACTGNT*SLAIII
Trigger: AATGATAATAGCTAGTGACAATGTGTTTCCTGTGCA...AGCTAGTGACAATGTGTTTCCTGTGCACTCGTGAAAATGCAGGGAGGACAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CAA 90 bp ACAAAGTTCACCTCTAGTTCAAGCGGTGGCTTCTGCTGGGACATACATAAGCCTTGCACAGGAAACACATaGTCACTAGCTATTATCATT +
Preference number: 5 (lower is better)
Translates to: TKFTSSSSGGFCWDIHKPCTGNT*SLAIII
Trigger: AATGATAATAGCTAGTGACAATGTGTTTCCTGTGCA...AGGCTTATGTATGTCCCAGCAGAAGCCACCGCTTGAACTAGAGGTGAACTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CAA 90 bp CTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCCGGATGTTTTTAGATTaGACTGGAATGTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: LNCRSHGNIHFCSTSSSRRMFLD*TGMFLA
Trigger: TGCCAAGAACATTCCAGTCAAATCTAAAAACATCCG...GCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CAA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCGCTGGATTGAGTTTATaGAAGGAGGGTGCTGATTTT +
Preference number: 5 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPIAGLSL*KEGADF
Trigger: AAAATCAGCACCCTCCTTCAATAAACTCAATCCAGC...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR CAA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCTGTATGTTGCAGAGATaGTGCCGGAAAATTTACACC +
Preference number: 5 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPICMLQR*CRKIYT
Trigger: GGTGTAAATTTTCCGGCACAATCTCTGCAACATACA...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR CAA 90 bp TTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCTCACCGACAATACCCTaGCACCATGTATGTTGCAGA +
Preference number: 5 (lower is better)
Translates to: FLNCRSHGNIHFCSTSSSSPTIP*HHVCCR
Trigger: TCTGCAACATACATGGTGCAAGGGTATTGTCGGTGA...GCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CAA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCTTACATTTTACAGCTTaGTCCTGTGCTGTGGCTGTT +
Preference number: 5 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPILHFTA*SCAVAV
Trigger: AACAGCCACAGCACAGGACAAAGCTGTAAAATGTAA...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR CAA 90 bp ACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATGGTTATGCCTCTTTTaGCTGGCCAGTACACTGAGG +
Preference number: 5 (lower is better)
Translates to: TDCFLNCRSHGNIHFCSTWLCLF*LASTLR
Trigger: CCTCAGTGTACTGGCCAGCAAAAAGAGGCATAACCA...TGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CAA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCTCTGACTTAAAGCACTaGCTTCTGGTACATCTGGAT +
Preference number: 5 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPISDLKH*LLVHLD
Trigger: ATCCAGATGTACCAGAAGCAAGTGCTTTAAGTCAGA...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR CAA 90 bp ACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACAATGGTTAAGCAGGGCTaGATCTTGTTCCGGAGCACT +
Preference number: 5 (lower is better)
Translates to: TDCFLNCRSHGNIHFCSTMVKQG*ILFRST
Trigger: AGTGCTCCGGAACAAGATCAAGCCCTGCTTAACCAT...TGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CAA 90 bp GACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTGTAGCAGGCTCCTGTTaGCAAAACTGTCAACACTGG +
Preference number: 5 (lower is better)
Translates to: DCFLNCRSHGNIHFCSTSVAGSC*QNCQHW
Trigger: CCAGTGTTGACAGTTTTGCAAACAGGAGCCTGCTAC...AGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CAA 90 bp TTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCAAATCAAAAGCCACGTaGGGGTTCCTCTGTCTGAGT +
Preference number: 5 (lower is better)
Translates to: FLNCRSHGNIHFCSTSSSKSKAT*GFLCLS
Trigger: ACTCAGACAGAGGAACCCCAACGTGGCTTTTGATTT...GCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000647536.1
CDS-3UTR CAA 90 bp ACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACAGGGCTGGTTCAACAGTaGCTGAGTCTAAGTGTGTAC +
Preference number: 5 (lower is better)
Translates to: TDCFLNCRSHGNIHFCSTGLVQQ*LSLSVY
Trigger: GTACACACTTAGACTCAGCAACTGTTGAACCAGCCC...TGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CAA 90 bp AACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCGCTCTTTGGAACCATTTTATTaGTGGGTGGAAGCTTTTCAG +
Preference number: 5 (lower is better)
Translates to: NCRSHGNIHFCSTSSSRSLEPFY*WVEAFQ
Trigger: CTGAAAAGCTTCCACCCACAAATAAAATGGTTCCAA...AGAGCGGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000637289.1
ENST00000647536.1
CDS-3UTR CAA 90 bp GACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTGAAGACGTAATTGATTaGACAATGGCCCTGCACCAG +
Preference number: 5 (lower is better)
Translates to: DCFLNCRSHGNIHFCSTSEDVID*TMALHQ
Trigger: CTGGTGCAGGGCCATTGTCAAATCAATTACGTCTTC...AGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CAA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCCGGATGTTTTTAGATTaGACTGGAATGTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPIRMFLD*TGMFLA
Trigger: TGCCAAGAACATTCCAGTCAAATCTAAAAACATCCG...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR CAA 90 bp CAACAATCCATTCGATCGTTTCTAAAAGGATGTCTTCAGGTTAAGTCCCCCATCTTGAACATCTTTTCCTaGCAAAAACATTGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: QQSIRSFLKGCLQVKSPILNIFS*QKHWPE
Trigger: CTCTGGCCAATGTTTTTGCAAGGAAAAGATGTTCAA...GATGGGGGACTTAACCTGAAGACATCCTTTTAGAAACGATCGAATGGATTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000421545.2
CDS-3UTR CAA 90 bp TTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCTGTATGTTGCAGAGATaGTGCCGGAAAATTTACACC +
Preference number: 5 (lower is better)
Translates to: FLTVGHMAISIFVQHLPACMLQR*CRKIYT
Trigger: GGTGTAAATTTTCCGGCACAATCTCTGCAACATACA...GGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CAA 90 bp TCACGAGTGCACAGGAAACACATTGTCACTAGCTATTATCATTTGCTGTGCTGTTTGGAACCATTTTATTaGTGGGTGGAAGCTAGAAGA +
Preference number: 5 (lower is better)
Translates to: SRVHRKHIVTSYYHLLCCLEPFY*WVEARR
Trigger: TCTTCTAGCTTCCACCCACAAATAAAATGGTTCCAA...ACAGCACAGCAAATGATAATAGCTAGTGACAATGTGTTTCCTGTGCACTCGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564769.2
CDS-3UTR CAA 90 bp GACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTTAGAATTCACTACCTaGGGGAAGTGGCTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: DCFLNCRSHGNIHFCSTSLEFTT*GKWLSS
Trigger: AGAGGACAGCCACTTCCCCAAGGTAGTGAATTCTAA...AGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000647536.1
CDS-3UTR CAA 90 bp TTGGTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTTAGAATTCACTACCTaGGGGAAGTGGCTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: LVMTDCFLNCRSHGNIHFLEFTT*GKWLSS
Trigger: AGAGGACAGCCACTTCCCCAAGGTAGTGAATTCTAA...AAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAACCAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000647536.1
CDS TCA 90 bp TTTTTGGCTTCCTCTTTATGGAGCCCAATTGTTAATAGCACAGGATaGAGAGGCCTGGAGGACATGCTATATTCTCCCAATAATTCAAAA +
Preference number: 5 (lower is better)
Translates to: FLASSLWSPIVNSTG*RGLEDMLYSPNNSK
Trigger: TTTTGAATTATTGGGAGAATATAGCATGTCCTCCAGGCCTCTTCATCCTGTGCTATTAACAATTGGGCTCCATAAAGAGGAAGCCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS-3UTR CAA 90 bp GACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTGAGGTCCATTTCTACTaGGTAATGACTTGTAGCAGG +
Preference number: 5 (lower is better)
Translates to: DCFLNCRSHGNIHFCSTSEVHFY*VMTCSR
Trigger: CCTGCTACAAGTCATTACCAAGTAGAAATGGACCTC...AGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CAA 90 bp TTGGTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTCACATCACAGCCCCTaGGAAGCTTTGTATTTTTGG +
Preference number: 5 (lower is better)
Translates to: LVMTDCFLNCRSHGNIHFSHHSP*EALYFW
Trigger: CCAAAAATACAAAGCTTCCAAGGGGCTGTGATGTGA...AAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CAA 90 bp TTGGTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTGCAAACATCTGTTCATaGGCTTCCAAGAATAGCACC +
Preference number: 5 (lower is better)
Translates to: LVMTDCFLNCRSHGNIHFANICS*ASKNST
Trigger: GGTGCTATTCTTGGAAGCCAATGAACAGATGTTTGC...AAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CAA 90 bp TTGGTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTAAGATGTACTACCTGTaGGACATTGCCATAGAGAGC +
Preference number: 5 (lower is better)
Translates to: LVMTDCFLNCRSHGNIHFKMYYL*DIAIES
Trigger: GCTCTCTATGGCAATGTCCAACAGGTAGTACATCTT...AAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CAA 90 bp TGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCAGCAAGACAGATTaGGCTTTCTTATCTCCCTGT +
Preference number: 5 (lower is better)
Translates to: CFLNCRSHGNIHFCSTSSSSKTD*AFLSPC
Trigger: ACAGGGAGATAAGAAAGCCAAATCTGTCTTGCTGCT...GGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CAA 90 bp TTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCTTCCATTCTATTTCGTaGTCAGCAGGTTTCACCCTA +
Preference number: 5 (lower is better)
Translates to: FLNCRSHGNIHFCSTSSSFHSIS*SAGFTL
Trigger: TAGGGTGAAACCTGCTGACAACGAAATAGAATGGAA...GCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637289.1
ENST00000647536.1
CDS-3UTR CAA 90 bp GTGCACAGGAAACACATTGTCACTAGCTATTATCATTTGCTGTGCTGTATGAAAACTAAAAAGCAACCTTaGTGCCATTTGCTCAGGACT +
Preference number: 5 (lower is better)
Translates to: VHRKHIVTSYYHLLCCMKTKKQP*CHLLRT
Trigger: AGTCCTGAGCAAATGGCACAAAGGTTGCTTTTTAGT...TTTCATACAGCACAGCAAATGATAATAGCTAGTGACAATGTGTTTCCTGTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS TCA 90 bp TCTGTTTCAGCTACAGAGCAGGTGAAGATCAAGGTCTTTTGTGCCTaGCTTGGAATAAAATCAAGAGCTTGGAGTAAAGAAGAAGTTTTT +
Preference number: 5 (lower is better)
Translates to: SVSATEQVKIKVFCA*LGIKSRAWSKEEVF
Trigger: AAAAACTTCTTCTTTACTCCAAGCTCTTGATTTTATTCCAAGTCAGGCACAAAAGACCTTGATCTTCACCTGCTCTGTAGCTGAAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS-3UTR CAA 90 bp TTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCTTGAACATCTTTTCCTaGCAAAAACATTGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: FLNCRSHGNIHFCSTSSSLNIFS*QKHWPE
Trigger: CTCTGGCCAATGTTTTTGCAAGGAAAAGATGTTCAA...GCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CAA 90 bp ACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACACGGAAACTTATTTCTTaGAAGAGCCTTCTTCAGGTC +
Preference number: 5 (lower is better)
Translates to: TDCFLNCRSHGNIHFCSTRKLIS*KSLLQV
Trigger: GACCTGAAGAAGGCTCTTCAAAGAAATAAGTTTCCG...TGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CAA 90 bp GTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTGGAAGCTTTGTATTTTaGGCTTCCTCTTTATGGAGC +
Preference number: 5 (lower is better)
Translates to: VMTDCFLNCRSHGNIHFCGSFVF*ASSLWS
Trigger: GCTCCATAAAGAGGAAGCCAAAAATACAAAGCTTCC...ACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CAA 90 bp TTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCCACTAGCTATTATCATTaGCTGTGCTGTATGAAAGAG +
Preference number: 5 (lower is better)
Translates to: FLTVGHMAISIFVQHLPATSYYH*LCCMKE
Trigger: CTCTTTCATACAGCACAGCAAATGATAATAGCTAGT...GGCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS GCA 90 bp CTCTTTGATGAGATGTTCTATATGTTTGTTCCAATGAACTCCAACTaGAACAATCTGATGTGGTGCAGATTCCCTTTCTTCAACTTCAAT +
Preference number: 5 (lower is better)
Translates to: LFDEMFYMFVPMNSN*NNLMWCRFPFFNFN
Trigger: ATTGAAGTTGAAGAAAGGGAATCTGCACCACATCAGATTGTTGCAGTTGGAGTTCATTGGAACAAACATATAGAACATCTCATCAAAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS-3UTR CAA 90 bp GTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTCTTTATGGAGCCCAATaGTTAATAGCACAGGATGAA +
Preference number: 5 (lower is better)
Translates to: VMTDCFLNCRSHGNIHFCLYGAQ*LIAQDE
Trigger: TTCATCCTGTGCTATTAACAATTGGGCTCCATAAAG...ACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CAA 90 bp ACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACAGAAGATCAAGGTCTTTaGTGCCTGACTTGGAATAAA +
Preference number: 5 (lower is better)
Translates to: TDCFLNCRSHGNIHFCSTEDQGL*CLTWNK
Trigger: TTTATTCCAAGTCAGGCACAAAAGACCTTGATCTTC...TGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647536.1
CDS-3UTR CAA 90 bp TGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAAGCCAGGATCACTTTaGCATCATGCAATTTTCCAA +
Preference number: 5 (lower is better)
Translates to: CFLNCRSHGNIHFCSTSSKPGSL*HHAIFQ
Trigger: TTGGAAAATTGCATGATGCAAAAGTGATCCTGGCTT...GGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000637289.1
ENST00000647536.1
CDS-3UTR CAA 90 bp TTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTTCAACATCTTCCAGCGACGACATCTTCTTTTaGGAACCATTTTATTTGTGG +
Preference number: 5 (lower is better)
Translates to: FLNCRSHGNIHFCSTSSSDDIFF*EPFYLW
Trigger: CCACAAATAAAATGGTTCCAAAAAGAAGATGTCGTC...GCTGGAAGATGTTGAACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR CAA 90 bp TTGGTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTAAAATAATAAAGATCTaGGGGCCGTCACACAACACT +
Preference number: 5 (lower is better)
Translates to: LVMTDCFLNCRSHGNIHFKIIKI*GPSHNT
Trigger: AGTGTTGTGTGACGGCCCCAAGATCTTTATTATTTT...AAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS-3UTR CAA 90 bp GTTATGACTGACTGTTTTCTTAACTGTCGGTCACATGGCAATATCCATTTTTGTGACGACATCTTCTTTTaGGAACCATTTTATTTGTGG +
Preference number: 5 (lower is better)
Translates to: VMTDCFLNCRSHGNIHFCDDIFF*EPFYLW
Trigger: CCACAAATAAAATGGTTCCAAAAAGAAGATGTCGTC...ACAAAAATGGATATTGCCATGTGACCGACAGTTAAGAAAACAGTCAGTCATAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS-3UTR CAA 90 bp TTTAATTTCCCAATAGCTCACCTTTCTCGCTTTTTCAGTCAACAAAGAAACCCAACTAGCTATTATCATTaGCTGTGCTGTATGAAAGAG +
Preference number: 5 (lower is better)
Translates to: FNFPIAHLSRFFSQQRNPTSYYH*LCCMKE
Trigger: CTCTTTCATACAGCACAGCAAATGATAATAGCTAGT...TGGGTTTCTTTGTTGACTGAAAAAGCGAGAAAGGTGAGCTATTGGGAAATTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564769.2
ENST00000637289.1
CDS CCA 72 bp AGTAACCAGCCCCTCGCTGCGGGATCCCTGCCTGCCTaGCCTCGGGCCTCCCGCACCCACCGGATGCCCGCG +
Preference number: 6 (lower is better)
Translates to: SNQPLAAGSLPA*PRASRTHRMPA
Trigger: CGCGGGCATCCGGTGGGTGCGGGAGGCCCGAGGCCAGGCAGGCAGGGATCCCGCAGCGAGGGGCTGGTTACT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444215.6
CDS CCA 72 bp AGGAGCTGGAGCATCCTCCTGGCGCCCGAGGGCAGATaGGCCCCCTCGCCCTGGAAGTCCCCTACCGTCGCG +
Preference number: 6 (lower is better)
Translates to: RSWSILLAPEGR*APSPWKSPTVA
Trigger: CGCGACGGTAGGGGACTTCCAGGGCGAGGGGGCCCATCTGCCCTCGGGCGCCAGGAGGATGCTCCAGCTCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS GCA 72 bp GGCTTCCAGAACTCCTGCGGTGAACTCGTACAGCTCTaGGGGGACCTTGGCGTCCGCTCGCTCCAAGTAGCG +
Preference number: 6 (lower is better)
Translates to: GFQNSCGELVQL*GDLGVRSLQVA
Trigger: CGCTACTTGGAGCGAGCGGACGCCAAGGTCCCCGCAGAGCTGTACGAGTTCACCGCAGGAGTTCTGGAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS CCA 72 bp GCTCCTCGGATGGATGATCCTGGTCTTGAGCAGGACTaGTCCCTGTCACCCTCGGCGGGGTCTGGCTTAGGC +
Preference number: 6 (lower is better)
Translates to: APRMDDPGLEQD*SLSPSAGSGLG
Trigger: GCCTAAGCCAGACCCCGCCGAGGGTGACAGGGACCAGTCCTGCTCAAGACCAGGATCATCCATCCGAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000444215.6
ENST00000564769.2
ENST00000637289.1
ENST00000647536.1
CDS CAA 72 bp AGCGGCGACGAGTCAATGGTTAAGCAGGGCTTGATCTaGTTCCGGAGCACTACCACGGGCGGCTGCAGGCCC +
Preference number: 6 (lower is better)
Translates to: SGDESMVKQGLI*FRSTTTGGCRP
Trigger: GGGCCTGCAGCCGCCCGTGGTAGTGCTCCGGAACAAGATCAAGCCCTGCTTAACCATTGACTCGTCGCCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS CCA 72 bp AAGCAACCTGGATCTTCAATCTTCAGCACCAGGAGCTaGAGCATCCTCCTGGCGCCCGAGGGCAGATGGGCC +
Preference number: 6 (lower is better)
Translates to: KQPGSSIFSTRS*SILLAPEGRWA
Trigger: GGCCCATCTGCCCTCGGGCGCCAGGAGGATGCTCCAGCTCCTGGTGCTGAAGATTGAAGATCCAGGTTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS CCA 72 bp CTCCACAGCCTGCGGGGGAAGTGTGTGGAAATGTTCTaGGAGATGCAGCAGCTGGTCCCTTGTGACGAGCCC +
Preference number: 6 (lower is better)
Translates to: LHSLRGKCVEMF*EMQQLVPCDEP
Trigger: GGGCTCGTCACAAGGGACCAGCTGCTGCATCTCCCAGAACATTTCCACACACTTCCCCCGCAGGCTGTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000444215.6
ENST00000637289.1
ENST00000647536.1
CDS CAA 72 bp GCTGACAGCGGCGACGAGTCAATGGTTAAGCAGGGCTaGATCTTGTTCCGGAGCACTACCACGGGCGGCTGC +
Preference number: 6 (lower is better)
Translates to: ADSGDESMVKQG*ILFRSTTTGGC
Trigger: GCAGCCGCCCGTGGTAGTGCTCCGGAACAAGATCAAGCCCTGCTTAACCATTGACTCGTCGCCGCTGTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS CAA 90 bp TCTGCTGACAGCGGCGACGAGTCAATGGTTAAGCAGGGCTTGATCTaGTTCCGGAGCACTACCACGGGCGGCTGCAGGCCCTTCAGCTTC +
Preference number: 6 (lower is better)
Translates to: SADSGDESMVKQGLI*FRSTTTGGCRPFSF
Trigger: GAAGCTGAAGGGCCTGCAGCCGCCCGTGGTAGTGCTCCGGAACAAGATCAAGCCCTGCTTAACCATTGACTCGTCGCCGCTGTCAGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS CAA 90 bp TTCAGGTCTGCTGACAGCGGCGACGAGTCAATGGTTAAGCAGGGCTaGATCTTGTTCCGGAGCACTACCACGGGCGGCTGCAGGCCCTTC +
Preference number: 6 (lower is better)
Translates to: FRSADSGDESMVKQG*ILFRSTTTGGCRPF
Trigger: GAAGGGCCTGCAGCCGCCCGTGGTAGTGCTCCGGAACAAGATCAAGCCCTGCTTAACCATTGACTCGTCGCCGCTGTCAGCAGACCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS TCA 72 bp CTGACAGCGGCGACGAGTCAATGGTTAAGCAGGGCTTaGTCTTGTTCCGGAGCACTACCACGGGCGGCTGCA +
Preference number: 6 (lower is better)
Translates to: LTAATSQWLSRA*SCSGALPRAAA
Trigger: TGCAGCCGCCCGTGGTAGTGCTCCGGAACAAGATCAAGCCCTGCTTAACCATTGACTCGTCGCCGCTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS GCA 72 bp GGCTTGATCTTGTTCCGGAGCACTACCACGGGCGGCTaGAGGCCCTTCAGCTTCTGCAACTGCTGGAGATCA +
Preference number: 6 (lower is better)
Translates to: GLILFRSTTTGG*RPFSFCNCWRS
Trigger: TGATCTCCAGCAGTTGCAGAAGCTGAAGGGCCTGCAGCCGCCCGTGGTAGTGCTCCGGAACAAGATCAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS CCA 72 bp GGAAGTGTGTGGAAATGTTCTGGGAGATGCAGCAGCTaGTCCCTTGTGACGAGCCCCGTCCTGCCTTCATCG +
Preference number: 6 (lower is better)
Translates to: GSVWKCSGRCSS*SLVTSPVLPSS
Trigger: CGATGAAGGCAGGACGGGGCTCGTCACAAGGGACCAGCTGCTGCATCTCCCAGAACATTTCCACACACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000444215.6
ENST00000637289.1
ENST00000647536.1
CDS TCA 72 bp CTTTCTTATCTTCTTTGGCTTCCAGAACTCCTGCGGTaGACTCGTACAGCTCTGCGGGGACCTTGGCGTCCG +
Preference number: 6 (lower is better)
Translates to: LSYLLWLPELLR*TRTALRGPWRP
Trigger: CGGACGCCAAGGTCCCCGCAGAGCTGTACGAGTTCACCGCAGGAGTTCTGGAAGCCAAAGAAGATAAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS GCA 72 bp TCCGGCTTTCTTATCTTCTTTGGCTTCCAGAACTCCTaGGGTGAACTCGTACAGCTCTGCGGGGACCTTGGC +
Preference number: 6 (lower is better)
Translates to: SGFLIFFGFQNS*GELVQLCGDLG
Trigger: GCCAAGGTCCCCGCAGAGCTGTACGAGTTCACCGCAGGAGTTCTGGAAGCCAAAGAAGATAAGAAAGCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS CAA 90 bp CCCACCGCATGGCTCGCATCTTTCTCCGTCAGCAGCAAGACAGATTaGGCTTTCTTATCTCCCTGTTCTGCAGGAGAACCCTGTTCAGCG +
Preference number: 6 (lower is better)
Translates to: PTAWLASFSVSSKTD*AFLSPCSAGEPCSA
Trigger: CGCTGAACAGGGTTCTCCTGCAGAACAGGGAGATAAGAAAGCCAAATCTGTCTTGCTGCTGACGGAGAAAGATGCGAGCCATGCGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS GCA 72 bp CCATGCCGAGTGGACGTACCTTTTCAGAGGCGGCTGTaGAGTTCTGCTAATGAAGGCACCTTCAGTGTTTCC +
Preference number: 6 (lower is better)
Translates to: PCRVDVPFQRRL*SSANEGTFSVS
Trigger: GGAAACACTGAAGGTGCCTTCATTAGCAGAACTGCACAGCCGCCTCTGAAAAGGTACGTCCACTCGGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564769.2
CDS CCA 72 bp CAGACAATAAACTCCACAGCCTGCGGGGGAAGTGTGTaGAAATGTTCTGGGAGATGCAGCAGCTGGTCCCTT +
Preference number: 6 (lower is better)
Translates to: QTINSTACGGSV*KCSGRCSSWSL
Trigger: AAGGGACCAGCTGCTGCATCTCCCAGAACATTTCCACACACTTCCCCCGCAGGCTGTGGAGTTTATTGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000444215.6
ENST00000637289.1
ENST00000647536.1
CDS CAA 90 bp GCCTTCAGATATGGACAAAGAGGCCTTCCGGCTTTCTTATCTTCTTaGGCTTCCAGAACTCCTGCGGTGAACTCGTACAGCTCTGCGGGG +
Preference number: 6 (lower is better)
Translates to: AFRYGQRGLPAFLSS*ASRTPAVNSYSSAG
Trigger: CCCCGCAGAGCTGTACGAGTTCACCGCAGGAGTTCTGGAAGCCAAAGAAGATAAGAAAGCCGGAAGGCCTCTTTGTCCATATCTGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS TCA 72 bp TTTGAATACCAAGTACCCACCAGGCTTCTGGTTTTCTaGGCTCGTCTTGGACTCAGCCCCTCCTTCTGCACC +
Preference number: 6 (lower is better)
Translates to: FEYQVPTRLLVF*ARLGLSPSFCT
Trigger: GGTGCAGAAGGAGGGGCTGAGTCCAAGACGAGCTCAGAAAACCAGAAGCCTGGTGGGTACTTGGTATTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444215.6
CDS CAA 72 bp GCTGTGGCTGTTGGCCTGAGGTCACCGACAATACCCTaGCACCATGTATGTTGCAGAGATTGTGCCGGAAAA +
Preference number: 6 (lower is better)
Translates to: AVAVGLRSPTIP*HHVCCRDCAGK
Trigger: TTTTCCGGCACAATCTCTGCAACATACATGGTGCAAGGGTATTGTCGGTGACCTCAGGCCAACAGCCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421545.2
ENST00000444215.6
ENST00000647536.1
CDS CCA 72 bp GGCTTGGCTGGACAGTTTCCTGGGCAAGTCCGTTTCTaGATTAATACGGTGTCGGTCAGGACAGATCCTTTT +
Preference number: 6 (lower is better)
Translates to: GLAGQFPGQVRF*INTVSVRTDPF
Trigger: AAAAGGATCTGTCCTGACCGACACCGTATTAATCCAGAAACGGACTTGCCCAGGAAACTGTCCAGCCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS CAA 72 bp TGGCTCGCATCTTTCTCCGTCAGCAGCAAGACAGATTaGGCTTTCTTATCTCCCTGTTCTGCAGGAGAACCC +
Preference number: 6 (lower is better)
Translates to: WLASFSVSSKTD*AFLSPCSAGEP
Trigger: GGGTTCTCCTGCAGAACAGGGAGATAAGAAAGCCAAATCTGTCTTGCTGCTGACGGAGAAAGATGCGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS CAA 90 bp TTGTCCTGTGCTGTGGCTGTTGGCCTGAGGTCACCGACAATACCCTaGCACCATGTATGTTGCAGAGATTGTGCCGGAAAATTTACACCA +
Preference number: 6 (lower is better)
Translates to: LSCAVAVGLRSPTIP*HHVCCRDCAGKFTP
Trigger: TGGTGTAAATTTTCCGGCACAATCTCTGCAACATACATGGTGCAAGGGTATTGTCGGTGACCTCAGGCCAACAGCCACAGCACAGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421545.2
ENST00000444215.6
ENST00000647536.1
CDS TCA 72 bp CAGGTTTTTAGAATTCACTACCTCTGTCTGAGTAGGTaGCACCATGCCTCCCTTCTCTCTTTGGCCAGAGTG +
Preference number: 6 (lower is better)
Translates to: QVFRIHYLCLSR*HHASLLSLARV
Trigger: CACTCTGGCCAAAGAGAGAAGGGAGGCATGGTGTCACCTACTCAGACAGAGGTAGTGAATTCTAAAAACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637289.1
CDS CCA 72 bp ATTACATTTTACAGCTTTGTCCTGTGCTGTGGCTGTTaGCCTGAGGTCACCGACAATACCCTTGCACCATGT +
Preference number: 6 (lower is better)
Translates to: ITFYSFVLCCGC*PEVTDNTLAPC
Trigger: ACATGGTGCAAGGGTATTGTCGGTGACCTCAGGCCAACAGCCACAGCACAGGACAAAGCTGTAAAATGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421545.2
ENST00000444215.6
ENST00000647536.1
CDS GCA 72 bp TTTTATTTGTGGGTGGAAGCTTTTCAGAGGCGGCTGTaGAGTTCTGCTAATGAAGGCACCTTCAGTGTTTCC +
Preference number: 6 (lower is better)
Translates to: FYLWVEAFQRRL*SSANEGTFSVS
Trigger: GGAAACACTGAAGGTGCCTTCATTAGCAGAACTGCACAGCCGCCTCTGAAAAGCTTCCACCCACAAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000637289.1
ENST00000639142.1
ENST00000647536.1
CDS CCA 72 bp TTGGCAAAGTCCACAAGGAAACATTCTGCCAGGTACTaGTCTGCGGAAGACGTAATTGATTTGACAATGGCC +
Preference number: 6 (lower is better)
Translates to: LAKSTRKHSARY*SAEDVIDLTMA
Trigger: GGCCATTGTCAAATCAATTACGTCTTCCGCAGACCAGTACCTGGCAGAATGTTTCCTTGTGGACTTTGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421545.2
ENST00000444215.6
ENST00000647536.1
CDS GCA 72 bp CTGAGGTCACCGACAATACCCTTGCACCATGTATGTTaGAGAGATTGTGCCGGAAAATTTACACCATGTGAA +
Preference number: 6 (lower is better)
Translates to: LRSPTIPLHHVC*RDCAGKFTPCE
Trigger: TTCACATGGTGTAAATTTTCCGGCACAATCTCTGCAACATACATGGTGCAAGGGTATTGTCGGTGACCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421545.2
ENST00000444215.6
ENST00000647536.1
CDS TCA 72 bp TCCTCTTTATGGAGCCCAATTGTTAATAGCACAGGATaGAGAGGCCTGGAGGACATGCTATATTCTCCCAAT +
Preference number: 6 (lower is better)
Translates to: SSLWSPIVNSTG*RGLEDMLYSPN
Trigger: ATTGGGAGAATATAGCATGTCCTCCAGGCCTCTTCATCCTGTGCTATTAACAATTGGGCTCCATAAAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS CCA 72 bp GGTATTATTTTAATGTATCCAAATGAAGGTAGGGCTTaGCTGGACAGTTTCCTGGGCAAGTCCGTTTCTGGA +
Preference number: 6 (lower is better)
Translates to: GIILMYPNEGRA*LDSFLGKSVSG
Trigger: TCCAGAAACGGACTTGCCCAGGAAACTGTCCAGCCAAGCCCTACCTTCATTTGGATACATTAAAATAATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS CAA 72 bp GCTTTGTATTTTTGGCTTCCTCTTTATGGAGCCCAATaGTTAATAGCACAGGATGAAGAGGCCTGGAGGACA +
Preference number: 6 (lower is better)
Translates to: ALYFWLPLYGAQ*LIAQDEEAWRT
Trigger: TGTCCTCCAGGCCTCTTCATCCTGTGCTATTAACAATTGGGCTCCATAAAGAGGAAGCCAAAAATACAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS CAA 90 bp CCCTTGGAAGCTTTGTATTTTTGGCTTCCTCTTTATGGAGCCCAATaGTTAATAGCACAGGATGAAGAGGCCTGGAGGACATGCTATATT +
Preference number: 6 (lower is better)
Translates to: PLEALYFWLPLYGAQ*LIAQDEEAWRTCYI
Trigger: AATATAGCATGTCCTCCAGGCCTCTTCATCCTGTGCTATTAACAATTGGGCTCCATAAAGAGGAAGCCAAAAATACAAAGCTTCCAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS GCA 72 bp TTGCTTCTGGTACATCTGGATCAGCATATATGGTTATaGCTCTTTTTGCTGGCCAGTACACTGAGGATTCAA +
Preference number: 6 (lower is better)
Translates to: LLLVHLDQHIWL*LFLLASTLRIQ
Trigger: TTGAATCCTCAGTGTACTGGCCAGCAAAAAGAGGCATAACCATATATGCTGATCCAGATGTACCAGAAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421545.2
ENST00000444215.6
ENST00000647536.1
CDS TCA 72 bp GCTACAGAGCAGGTGAAGATCAAGGTCTTTTGTGCCTaGCTTGGAATAAAATCAAGAGCTTGGAGTAAAGAA +
Preference number: 6 (lower is better)
Translates to: ATEQVKIKVFCA*LGIKSRAWSKE
Trigger: TTCTTTACTCCAAGCTCTTGATTTTATTCCAAGTCAGGCACAAAAGACCTTGATCTTCACCTGCTCTGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS CAA 72 bp ACAATCACATCACAGCCCCTTGGAAGCTTTGTATTTTaGGCTTCCTCTTTATGGAGCCCAATTGTTAATAGC +
Preference number: 6 (lower is better)
Translates to: TITSQPLGSFVF*ASSLWSPIVNS
Trigger: GCTATTAACAATTGGGCTCCATAAAGAGGAAGCCAAAAATACAAAGCTTCCAAGGGGCTGTGATGTGATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1
CDS CAA 72 bp ATGTACCTAGTAACCTTCGGATTCCATTCTATTTCGTaGTCAGCAGGTTTCACCCTACAGACAATAAACTCC +
Preference number: 6 (lower is better)
Translates to: MYLVTFGFHSIS*SAGFTLQTINS
Trigger: GGAGTTTATTGTCTGTAGGGTGAAACCTGCTGACAACGAAATAGAATGGAATCCGAAGGTTACTAGGTACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000444215.6
ENST00000637289.1
ENST00000647536.1
CDS CAA 90 bp TTGCTTCTGGTACATCTGGATCAGCATATATGGTTATGCCTCTTTTaGCTGGCCAGTACACTGAGGATTCAACACGCTTATTTGTATCTT +
Preference number: 6 (lower is better)
Translates to: LLLVHLDQHIWLCLF*LASTLRIQHAYLYL
Trigger: AAGATACAAATAAGCGTGTTGAATCCTCAGTGTACTGGCCAGCAAAAAGAGGCATAACCATATATGCTGATCCAGATGTACCAGAAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421545.2
ENST00000444215.6
ENST00000647536.1
CDS TCA 72 bp TTTCCAGACATTAACGATTTGAACTTAACCATCTTTTaGATACCAAGTACCCACCAGGCTTCTGGTTTTCTG +
Preference number: 6 (lower is better)
Translates to: FPDINDLNLTIF*IPSTHQASGFL
Trigger: CAGAAAACCAGAAGCCTGGTGGGTACTTGGTATTCAAAAGATGGTTAAGTTCAAATCGTTAATGTCTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444215.6
CDS CCA 72 bp CGATTCTACTACAACTCGGATGTTTTTAGATTTGACTaGAATGTTCTTGGCAAAGTCCACAAGGAAACATTC +
Preference number: 6 (lower is better)
Translates to: RFYYNSDVFRFD*NVLGKVHKETF
Trigger: GAATGTTTCCTTGTGGACTTTGCCAAGAACATTCCAGTCAAATCTAAAAACATCCGAGTTGTAGTAGAATCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421545.2
ENST00000444215.6
ENST00000647536.1
CDS GCA 72 bp TCAGTTGTTCTATGTGTTCTGGATTATCAATGCCCATaGCCATGGACAAAATTTCAGCTCGAACATTATAAT +
Preference number: 6 (lower is better)
Translates to: SVVLCVLDYQCP*PWTKFQLEHYN
Trigger: ATTATAATGTTCGAGCTGAAATTTTGTCCATGGGCATGGGCATTGATAATCCAGAACACATAGAACAACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000444215.6
ENST00000637289.1
ENST00000647536.1
CDS CCA 72 bp TTTGTTCCAATGAACTCCAACTGCAACAATCTGATGTaGTGCAGATTCCCTTTCTTCAACTTCAATATTTTT +
Preference number: 6 (lower is better)
Translates to: FVPMNSNCNNLM*CRFPFFNFNIF
Trigger: AAAAATATTGAAGTTGAAGAAAGGGAATCTGCACCACATCAGATTGTTGCAGTTGGAGTTCATTGGAACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444215.6
ENST00000647536.1