RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TDRD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000095627

Ensembl transcript IDs: ENST00000251864.6, ENST00000369280.1, ENST00000369282.5

Found 424 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGACACAGCAGGAGAGGGAACATAAAGTTCCTTCTCCAGTTAGAGTaGTCCAGAGGTCAGACTCTGTGCCCAAAGGCCAAAAGAAAAATA +
Preference number: 1 (lower is better)
Translates to: GHSRRGNIKFLLQLE*SRGQTLCPKAKRKI
Trigger: TATTTTTCTTTTGGCCTTTGGGCACAGAGTCTGACCTCTGGACCACTCTAACTGGAGAAGGAACTTTATGTTCCCTCTCCTGCTGTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251864.6
3UTR-3UTR GCA 90 bp GGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATACTGGGCGTGAGCCACTaGACCTGGCCTTCCTTCGGT +
Preference number: 2 (lower is better)
Translates to: GHYVEEADDRECREYYKILGVSH*TWPSFG
Trigger: ACCGAAGGAAGGCCAGGTGCAGTGGCTCACGCCCAG...TATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
3UTR-3UTR TCA 90 bp CTTCTCCAGTTAGAGTGGTCCAGAGGTCAGACTCTGTGCCCAAAGGCCAAAAGATTGATGACCTCTGAGTaGACAGAAAAAGAAGATAAC +
Preference number: 2 (lower is better)
Translates to: LLQLEWSRGQTLCPKAKRLMTSE*TEKEDN
Trigger: GTTATCTTCTTTTTCTGTTCACTCAGAGGTCATCAA...TCTTTTGGCCTTTGGGCACAGAGTCTGACCTCTGGACCACTCTAACTGGAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251864.6
3UTR-3UTR CCA 90 bp ACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATTGTGAGCCACTGCACCTaGCCTTCCTTCGGTACCTTT +
Preference number: 2 (lower is better)
Translates to: TLCGRGRRQRMQGILQNIVSHCT*PSFGTF
Trigger: AAAGGTACCGAAGGAAGGCCAGGTGCAGTGGCTCAC...AATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
3UTR-3UTR TCA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCTCCTGCCAATATGCCTaGAGATGTCCTATTGGTGAT +
Preference number: 2 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSSCQYA*RCPIGD
Trigger: ATCACCAATAGGACATCTTCAGGCATATTGGCAGGA...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
3UTR-3UTR TCA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGAAGATGTCCTATTGGTaGTCACAGAAGAGGCGAAAA +
Preference number: 2 (lower is better)
Translates to: SVPLAVAKENDQINLQKQKMSYW*SQKRRK
Trigger: TTTTCGCCTCTTCTGTGATCACCAATAGGACATCTT...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
3UTR-3UTR GCA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGTCTATCCTGCCAATATaGCTGAAGATGTCCTATTGG +
Preference number: 2 (lower is better)
Translates to: SVPLAVAKENDQINLQKQSILPI*LKMSYW
Trigger: CCAATAGGACATCTTCAGGCATATTGGCAGGATAGA...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
3UTR CCA 72 bp AGGAGAGGGAACATAAAGTTCCTTCTCCAGTTAGAGTaGTCCAGAGGTCAGACTCTGTGCCCAAAGGCCAAA +
Preference number: 3 (lower is better)
Translates to: RRGNIKFLLQLE*SRGQTLCPKAK
Trigger: TTTGGCCTTTGGGCACAGAGTCTGACCTCTGGACCACTCTAACTGGAGAAGGAACTTTATGTTCCCTCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251864.6
3UTR-3UTR CAA 90 bp TACAGATTTCTAAGGTTGTGGACACAGCAGGAGAGGGAACATAAAGTTCCTTCTGTCCCTATGTATTCCTaGCCAGTATTCTCATTGATT +
Preference number: 3 (lower is better)
Translates to: YRFLRLWTQQEREHKVPSVPMYS*PVFSLI
Trigger: AATCAATGAGAATACTGGCAAGGAATACATAGGGAC...AGAAGGAACTTTATGTTCCCTCTCCTGCTGTGTCCACAACCTTAGAAATCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp CTTCTCCAGTTAGAGTGGTCCAGAGGTCAGACTCTGTGCCCAAAGGCCAAAAGAGGCGACTGCCGATGCTaGGAGCCCTGCCGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: LLQLEWSRGQTLCPKAKRGDCRC*EPCRLG
Trigger: TCCCAGGCGGCAGGGCTCCCAGCATCGGCAGTCGCC...TCTTTTGGCCTTTGGGCACAGAGTCTGACCTCTGGACCACTCTAACTGGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR GCA 90 bp CTTCTCCAGTTAGAGTGGTCCAGAGGTCAGACTCTGTGCCCAAAGGCCAAAAGAGCCTGGGATGCGCCCTaGACTTCCCTCGCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: LLQLEWSRGQTLCPKAKRAWDAP*TSLASN
Trigger: ATTGGAGGCGAGGGAAGTGCAGGGCGCATCCCAGGC...TCTTTTGGCCTTTGGGCACAGAGTCTGACCTCTGGACCACTCTAACTGGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATGGCGACTGCCGATGCTaGGAGCCCTGCCGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDGDCRC*EPCRLG
Trigger: TCCCAGGCGGCAGGGCTCCCAGCATCGGCAGTCGCC...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp AAAGCAAAGGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTCCCTGCCGCCTGGGATaGGCCCTGCACTTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: KAKDIMWKRQTTENAGNIPCRLG*ALHFPR
Trigger: GCGAGGGAAGTGCAGGGCGCATCCCAGGCGGCAGGG...AATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCCTTTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR GCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAGATGGCGACTGCCGATaGTGGGAGCCCTGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIDGDCR*WEPCRL
Trigger: CAGGCGGCAGGGCTCCCAGCATCGGCAGTCGCCATC...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAGGCGGTGATGGCGACTaGCGATGCTGGGAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIGGDGD*RCWEPC
Trigger: GCAGGGCTCCCAGCATCGGCAGTCGCCATCACCGCC...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATTCTGCGGTCTGGCGGTaGTGGCGACTGCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDSAVWR*WRLPML
Trigger: CAGCATCGGCAGTCGCCATCACCGCCAGACCGCAGA...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAGCCTGGGATGCGCCCTaGACTTCCCTCGCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIAWDAP*TSLASN
Trigger: ATTGGAGGCGAGGGAAGTGCAGGGCGCATCCCAGGC...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTCCCTGCCGCCTGGGATaGGCCCTGCACTTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSPCRLG*ALHFPR
Trigger: GCGAGGGAAGTGCAGGGCGCATCCCAGGCGGCAGGG...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp GACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATCGATGCTGGGAGCCCTaGCGCCTGGGATGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: DIMWKRQTTENAGNITKYRCWEP*RLGCAL
Trigger: CAGGGCGCATCCCAGGCGGCAGGGCTCCCAGCATCG...ATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTGGGAGCCCTGCCGCCTaGGATGCGCCCTGCACTTCC +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSGSPAA*DAPCTS
Trigger: GGAAGTGCAGGGCGCATCCCAGGCGGCAGGGCTCCC...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp CTTCTCCAGTTAGAGTGGTCCAGAGGTCAGACTCTGTGCCCAAAGGCCAAAAGAAGCGATGGCAAGTTGTaGACCGAAGAGGAGGTCCTA +
Preference number: 4 (lower is better)
Translates to: LLQLEWSRGQTLCPKAKRSDGKL*TEEEVL
Trigger: TAGGACCTCCTCTTCGGTCCACAACTTGCCATCGCT...TCTTTTGGCCTTTGGGCACAGAGTCTGACCTCTGGACCACTCTAACTGGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp CTTCTCCAGTTAGAGTGGTCCAGAGGTCAGACTCTGTGCCCAAAGGCCAAAAGAAAAGGAAGCGCCAGGTaGCTAGAGGTGATTGGTTGC +
Preference number: 4 (lower is better)
Translates to: LLQLEWSRGQTLCPKAKRKGSAR*LEVIGC
Trigger: GCAACCAATCACCTCTAGCCACCTGGCGCTTCCTTT...TCTTTTGGCCTTTGGGCACAGAGTCTGACCTCTGGACCACTCTAACTGGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR TCA 90 bp GGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATCTGCGGTCTGGCGGTaGTGGCGACTGCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: GHYVEEADDRECREYYKISAVWR*WRLPML
Trigger: CAGCATCGGCAGTCGCCATCACCGCCAGACCGCAGA...TATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR TCA 90 bp CTTCTCCAGTTAGAGTGGTCCAGAGGTCAGACTCTGTGCCCAAAGGCCAAAAGATTGTGGAAATTTGGCTaGACAGGCCTGCACACGATG +
Preference number: 4 (lower is better)
Translates to: LLQLEWSRGQTLCPKAKRLWKFG*TGLHTM
Trigger: CATCGTGTGCAGGCCTGTTCAGCCAAATTTCCACAA...TCTTTTGGCCTTTGGGCACAGAGTCTGACCTCTGGACCACTCTAACTGGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR GCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTGATGGCGACTGCCGATaGTGGGAGCCCTGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSDGDCR*WEPCRL
Trigger: CAGGCGGCAGGGCTCCCAGCATCGGCAGTCGCCATC...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp ACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATTGGGAGCCCTGCCGCCTaGGATGCGCCCTGCACTTCC +
Preference number: 4 (lower is better)
Translates to: TLCGRGRRQRMQGILQNIGSPAA*DAPCTS
Trigger: GGAAGTGCAGGGCGCATCCCAGGCGGCAGGGCTCCC...AATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR GCA 90 bp ACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATTGGCGGTGATGGCGACTaGCGATGCTGGGAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: TLCGRGRRQRMQGILQNIGGDGD*RCWEPC
Trigger: GCAGGGCTCCCAGCATCGGCAGTCGCCATCACCGCC...AATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR GCA 90 bp AAAGCAAAGGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTATCCGAACCTGTCTCTaGGGTCTGGCGGTGATGGCG +
Preference number: 4 (lower is better)
Translates to: KAKDIMWKRQTTENAGNIIRTCL*GLAVMA
Trigger: CGCCATCACCGCCAGACCGCAGAGACAGGTTCGGAT...AATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCCTTTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR GCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATACAGGCCTGCACACGATaGTGTGTGCAGACCAGTCTC +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIQACTR*CVQTSL
Trigger: GAGACTGGTCTGCACACAGCATCGTGTGCAGGCCTG...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATCAGGCCTGCACACGATaGTGTGTGCAGACCAGTCTC +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDQACTR*CVQTSL
Trigger: GAGACTGGTCTGCACACAGCATCGTGTGCAGGCCTG...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp CTTCTCCAGTTAGAGTGGTCCAGAGGTCAGACTCTGTGCCCAAAGGCCAAAAGATGCGTCTCCAATTCTTaGTCTATAGGGTGGTCGACT +
Preference number: 4 (lower is better)
Translates to: LLQLEWSRGQTLCPKAKRCVSNS*SIGWST
Trigger: AGTCGACCACCCTATAGACCAAGAATTGGAGACGCA...TCTTTTGGCCTTTGGGCACAGAGTCTGACCTCTGGACCACTCTAACTGGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR TCA 90 bp CTTCTCCAGTTAGAGTGGTCCAGAGGTCAGACTCTGTGCCCAAAGGCCAAAAGACACTTCTTTGGGTGGTaGATTACTTTCAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: LLQLEWSRGQTLCPKAKRHFFGW*ITFSTW
Trigger: CCAAGTGCTGAAAGTAATTCACCACCCAAAGAAGTG...TCTTTTGGCCTTTGGGCACAGAGTCTGACCTCTGGACCACTCTAACTGGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR TCA 90 bp AGTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCGAGCGTGGAGGCAACTaGTCACAGTACTTGCTAAGG +
Preference number: 4 (lower is better)
Translates to: SKERLLQLEYPWGFSSISERGGN*SQYLLR
Trigger: CCTTAGCAAGTACTGTGATCAGTTGCCTCCACGCTC...GCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR TCA 90 bp CTTCTCCAGTTAGAGTGGTCCAGAGGTCAGACTCTGTGCCCAAAGGCCAAAAGACTATCCCATTTTCAGTaGCTTCAACCACTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LLQLEWSRGQTLCPKAKRLSHFQ*LQPLWL
Trigger: AAGCCAGAGTGGTTGAAGTCACTGAAAATGGGATAG...TCTTTTGGCCTTTGGGCACAGAGTCTGACCTCTGGACCACTCTAACTGGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR GCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATTTGGCTGAACAGGCCTaGACACGATGCTGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDLAEQA*TRCCVQ
Trigger: CTGCACACAGCATCGTGTGCAGGCCTGTTCAGCCAA...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp CTTCTCCAGTTAGAGTGGTCCAGAGGTCAGACTCTGTGCCCAAAGGCCAAAAGAGTATTTGGCACAGCATaGGTCTCCAATTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: LLQLEWSRGQTLCPKAKRVFGTA*VSNSWS
Trigger: AGACCAAGAATTGGAGACGCATGCTGTGCCAAATAC...TCTTTTGGCCTTTGGGCACAGAGTCTGACCTCTGGACCACTCTAACTGGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp CTTCTCCAGTTAGAGTGGTCCAGAGGTCAGACTCTGTGCCCAAAGGCCAAAAGATCTTGGTCTATAGGGTaGTCGACTTTTCGGAGCATT +
Preference number: 4 (lower is better)
Translates to: LLQLEWSRGQTLCPKAKRSWSIG*STFRSI
Trigger: AATGCTCCGAAAAGTCGACCACCCTATAGACCAAGA...TCTTTTGGCCTTTGGGCACAGAGTCTGACCTCTGGACCACTCTAACTGGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR TCA 90 bp AGTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCTTGTGGAAATTTGGCTaGACAGGCCTGCACACGATG +
Preference number: 4 (lower is better)
Translates to: SKERLLQLEYPWGFSSISLWKFG*TGLHTM
Trigger: CATCGTGTGCAGGCCTGTTCAGCCAAATTTCCACAA...GCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR TCA 90 bp AGTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCGCTCTGTTCCAGGTCTaGTCAACAGTGTACTTGGCA +
Preference number: 4 (lower is better)
Translates to: SKERLLQLEYPWGFSSISALFQV*STVYLA
Trigger: TGCCAAGTACACTGTTGATCAGACCTGGAACAGAGC...GCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR TCA 90 bp GTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCACTTCCATTGCTCAGCTaGAGAGGTAGCTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: VRKGYYNWNTPGGSVPLALPLLS*RGSLKS
Trigger: GGACTTCAAGCTACCTCTTCAGCTGAGCAATGGAAG...TGCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTATCCGAACCTGTCTCTaGGGTCTGGCGGTGATGGCG +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSIRTCL*GLAVMA
Trigger: CGCCATCACCGCCAGACCGCAGAGACAGGTTCGGAT...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp AGTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCGCACACGATGCTGTGTaGAGACCAGTCTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: SKERLLQLEYPWGFSSISAHDAV*RPVSSL
Trigger: CAAAGAAGAGACTGGTCTGCACACAGCATCGTGTGC...GCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCCAGGCCTGCACACGATaGTGTGTGCAGACCAGTCTC +
Preference number: 4 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSQACTR*CVQTSL
Trigger: GAGACTGGTCTGCACACAGCATCGTGTGCAGGCCTG...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp TACAGATTTCTAAGGTTGTGGACACAGCAGGAGAGGGAACATAAAGTTCCTTCTTTGGCTGAACAGGCCTaGACACGATGCTGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: YRFLRLWTQQEREHKVPSLAEQA*TRCCVQ
Trigger: CTGCACACAGCATCGTGTGCAGGCCTGTTCAGCCAA...AGAAGGAACTTTATGTTCCCTCTCCTGCTGTGTCCACAACCTTAGAAATCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR GCA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGTTGGCTGAACAGGCCTaGACACGATGCTGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: PYNRFHSISSILPICLKMLAEQA*TRCCVQ
Trigger: CTGCACACAGCATCGTGTGCAGGCCTGTTCAGCCAA...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp ACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATTCTGGGCGTGAGCCACTaGACCTGGCCTTCCTTCGGT +
Preference number: 4 (lower is better)
Translates to: TLCGRGRRQRMQGILQNILGVSH*TWPSFG
Trigger: ACCGAAGGAAGGCCAGGTGCAGTGGCTCACGCCCAG...AATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAGCGATGGCAAGTTGTaGACCGAAGAGGAGGTCCTA +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDSDGKL*TEEEVL
Trigger: TAGGACCTCCTCTTCGGTCCACAACTTGCCATCGCT...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp AGTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCAATAGGCCACAGCGATaGCAAGTTGTGGACCGAAGA +
Preference number: 4 (lower is better)
Translates to: SKERLLQLEYPWGFSSISNRPQR*QVVDRR
Trigger: TCTTCGGTCCACAACTTGCCATCGCTGTGGCCTATT...GCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp CTTCTCCAGTTAGAGTGGTCCAGAGGTCAGACTCTGTGCCCAAAGGCCAAAAGACCAATTCCCTTCTGCTaGGATAACATTGGCTACAAA +
Preference number: 4 (lower is better)
Translates to: LLQLEWSRGQTLCPKAKRPIPFC*DNIGYK
Trigger: TTTGTAGCCAATGTTATCCCAGCAGAAGGGAATTGG...TCTTTTGGCCTTTGGGCACAGAGTCTGACCTCTGGACCACTCTAACTGGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAAAAGGAAGCGCCAGGTaGCTAGAGGTGATTGGTTGC +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIKGSAR*LEVIGC
Trigger: GCAACCAATCACCTCTAGCCACCTGGCGCTTCCTTT...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATGCTCTGTTCCAGGTCTaGTCAACAGTGTACTTGGCA +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDALFQV*STVYLA
Trigger: TGCCAAGTACACTGTTGATCAGACCTGGAACAGAGC...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATATTCCACATCAGTGTCTaGTGTCCCCAGAACAACTGC +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIFHISV*CPQNNC
Trigger: GCAGTTGTTCTGGGGACATCAGACACTGATGTGGAA...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp AGTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCGTGAACGTTTGCATTTaGAGGAGTGATGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SKERLLQLEYPWGFSSISVNVCI*RSDAWK
Trigger: CTTCCAGGCATCACTCCTTCAAATGCAAACGTTCAC...GCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAAATAGTAGGTCTGCTTaGACTGAGAGCACCTCAGCG +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGINSRSA*TESTSA
Trigger: CGCTGAGGTGCTCTCAGTGCAAGCAGACCTACTATT...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAGCACACGATGCTGTGTaGAGACCAGTCTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIAHDAV*RPVSSL
Trigger: CAAAGAAGAGACTGGTCTGCACACAGCATCGTGTGC...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp CTTCTCCAGTTAGAGTGGTCCAGAGGTCAGACTCTGTGCCCAAAGGCCAAAAGAAACGTTTTGTATGATTaGTCTGTTCCAGGTCTGATC +
Preference number: 4 (lower is better)
Translates to: LLQLEWSRGQTLCPKAKRNVLYD*SVPGLI
Trigger: GATCAGACCTGGAACAGAGCAATCATACAAAACGTT...TCTTTTGGCCTTTGGGCACAGAGTCTGACCTCTGGACCACTCTAACTGGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGAGCGATGGCAAGTTGTaGACCGAAGAGGAGGTCCTA +
Preference number: 4 (lower is better)
Translates to: PYNRFHSISSILPICLKMSDGKL*TEEEVL
Trigger: TAGGACCTCCTCTTCGGTCCACAACTTGCCATCGCT...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAAATAGGCCACAGCGATaGCAAGTTGTGGACCGAAGA +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGINRPQR*QVVDRR
Trigger: TCTTCGGTCCACAACTTGCCATCGCTGTGGCCTATT...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp CTTCTCCAGTTAGAGTGGTCCAGAGGTCAGACTCTGTGCCCAAAGGCCAAAAGATGTCGACAATCTTTATaGAGCAGTACTGCTCCATTA +
Preference number: 4 (lower is better)
Translates to: LLQLEWSRGQTLCPKAKRCRQSL*SSTAPL
Trigger: TAATGGAGCAGTACTGCTCCATAAAGATTGTCGACA...TCTTTTGGCCTTTGGGCACAGAGTCTGACCTCTGGACCACTCTAACTGGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATCACCCAAGGGAACACTaGTTTCTTTCACGTCACTGG +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDHPREH*FLSRHW
Trigger: CCAGTGACGTGAAAGAAACCAGTGTTCCCTTGGGTG...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATGTGGCTAGAGGTGATTaGTTGCACTCTGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDVARGD*LHSAKR
Trigger: CCTCTTTGCAGAGTGCAACCAATCACCTCTAGCCAC...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp GGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATAGTGAGCCACTGCACCTaGCCTTCCTTCGGTACCTTT +
Preference number: 4 (lower is better)
Translates to: GHYVEEADDRECREYYKIVSHCT*PSFGTF
Trigger: AAAGGTACCGAAGGAAGGCCAGGTGCAGTGGCTCAC...TATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR TCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATCAACTACTTCTCCGTTaGTGCCATTCGGGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDQLLLR*CHSGLK
Trigger: CTTCAAACCCGAATGGCATCAACGGAGAAGTAGTTG...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp GTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCACACTTCTTTGGGTGGTaGATTACTTTCAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: VRKGYYNWNTPGGSVPLAHFFGW*ITFSTW
Trigger: CCAAGTGCTGAAAGTAATTCACCACCCAAAGAAGTG...TGCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR TCA 90 bp TACAGATTTCTAAGGTTGTGGACACAGCAGGAGAGGGAACATAAAGTTCCTTCTGAGGTCCTAAGGAGGTaGAGAGCCCTGGATTACTTA +
Preference number: 4 (lower is better)
Translates to: YRFLRLWTQQEREHKVPSEVLRR*RALDYL
Trigger: TAAGTAATCCAGGGCTCTTCACCTCCTTAGGACCTC...AGAAGGAACTTTATGTTCCCTCTCCTGCTGTGTCCACAACCTTAGAAATCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR TCA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGGAGGTCCTAAGGAGGTaGAGAGCCCTGGATTACTTA +
Preference number: 4 (lower is better)
Translates to: PYNRFHSISSILPICLKMEVLRR*RALDYL
Trigger: TAAGTAATCCAGGGCTCTTCACCTCCTTAGGACCTC...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR TCA 90 bp GTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCACTATCCCATTTTCAGTaGCTTCAACCACTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: VRKGYYNWNTPGGSVPLALSHFQ*LQPLWL
Trigger: AAGCCAGAGTGGTTGAAGTCACTGAAAATGGGATAG...TGCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR TCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAAGTGGAGAGATCGGTaGGTTCAACTCCTATCCCAT +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDKWRDR*VQLLSH
Trigger: ATGGGATAGGAGTTGAACTCACCGATCTCTCCACTT...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp AAAGCAAAGGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTCTTCCATTGCTCAGCTaGAGAGGTAGCTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: KAKDIMWKRQTTENAGNILPLLS*RGSLKS
Trigger: GGACTTCAAGCTACCTCTTCAGCTGAGCAATGGAAG...AATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCCTTTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR TCA 90 bp CTTCTCCAGTTAGAGTGGTCCAGAGGTCAGACTCTGTGCCCAAAGGCCAAAAGAGAAATTGATGACCTCTaGGTGAACAGAAAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: LLQLEWSRGQTLCPKAKREIDDL*VNRKRR
Trigger: TCTTCTTTTTCTGTTCACTCAGAGGTCATCAATTTC...TCTTTTGGCCTTTGGGCACAGAGTCTGACCTCTGGACCACTCTAACTGGAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR TCA 90 bp AGTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCTTGCATTTGAAGGAGTaGTGCCTGGAAGCGCTATTT +
Preference number: 4 (lower is better)
Translates to: SKERLLQLEYPWGFSSISLHLKE*CLEALF
Trigger: AAATAGCGCTTCCAGGCATCACTCCTTCAAATGCAA...GCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp AAAGCAAAGGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTGCACACGATGCTGTGTaGAGACCAGTCTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: KAKDIMWKRQTTENAGNIAHDAV*RPVSSL
Trigger: CAAAGAAGAGACTGGTCTGCACACAGCATCGTGTGC...AATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCCTTTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR GCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATGCTCCAATTCCCTTCTaGTGGGATAACATTGGCTAC +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDAPIPF*WDNIGY
Trigger: GTAGCCAATGTTATCCCAGCAGAAGGGAATTGGAGC...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp GTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCATCTATCGTCTTCCATTaGTCAGCTGAAGAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: VRKGYYNWNTPGGSVPLASIVFH*SAEEVA
Trigger: AGCTACCTCTTCAGCTGAGCAATGGAAGACGATAGA...TGCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAGGAGGTGAAGAGCCCTaGATTACTTATGGACAAGGA +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIGGEEP*ITYGQG
Trigger: TCCTTGTCCATAAGTAATCCAGGGCTCTTCACCTCC...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATGGAGGTGAAGAGCCCTaGATTACTTATGGACAAGGA +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDGGEEP*ITYGQG
Trigger: TCCTTGTCCATAAGTAATCCAGGGCTCTTCACCTCC...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATACACGTAGAAGTCCCCTaGGTGTTTGAATTCGGTAAC +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIHVEVP*VFEFGN
Trigger: GTTACCGAATTCAAACACCCAGGGGACTTCTACGTG...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATTGCGTCTCCAATTCTTaGTCTATAGGGTGGTCGACT +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDCVSNS*SIGWST
Trigger: AGTCGACCACCCTATAGACCAAGAATTGGAGACGCA...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp AAAGCAAAGGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTGTGGCTAGAGGTGATTaGTTGCACTCTGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: KAKDIMWKRQTTENAGNIVARGD*LHSAKR
Trigger: CCTCTTTGCAGAGTGCAACCAATCACCTCTAGCCAC...AATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCCTTTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGGTGGCTAGAGGTGATTaGTTGCACTCTGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: PYNRFHSISSILPICLKMVARGD*LHSAKR
Trigger: CCTCTTTGCAGAGTGCAACCAATCACCTCTAGCCAC...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCAAAGGAAGCGCCAGGTaGCTAGAGGTGATTGGTTGC +
Preference number: 4 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSKGSAR*LEVIGC
Trigger: GCAACCAATCACCTCTAGCCACCTGGCGCTTCCTTT...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGCAACTGGAATACCCCTaGGGGTTCAGTTCCATTAGC +
Preference number: 4 (lower is better)
Translates to: PYNRFHSISSILPICLKMQLEYP*GFSSIS
Trigger: GCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTG...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp AGTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCAAAGGCTATTACAACTaGAATACCCCTGGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: SKERLLQLEYPWGFSSISKGYYN*NTPGGS
Trigger: TGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTT...GCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR TCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATACACTTCTTTGGGTGGTaGATTACTTTCAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIHFFGW*ITFSTW
Trigger: CCAAGTGCTGAAAGTAATTCACCACCCAAAGAAGTG...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp AGTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCCCACTTTGCAGTTGTTaGCAAAAGAAGTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: SKERLLQLEYPWGFSSISPLCSC*QKKSSG
Trigger: ACCAGAAGACTTCTTTTGTCAACAACTGCAAAGTGG...GCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR TCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTGAGCGTGGAGGCAACTaGTCACAGTACTTGCTAAGG +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSERGGN*SQYLLR
Trigger: CCTTAGCAAGTACTGTGATCAGTTGCCTCCACGCTC...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATATTGCTAACACTGACATaGGGCGTCTCGGATTTATCA +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGILLTLT*GVSDLS
Trigger: TGATAAATCCGAGACGCCTCATGTCAGTGTTAGCAA...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATACTATCCCATTTTCAGTaGCTTCAACCACTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGILSHFQ*LQPLWL
Trigger: AAGCCAGAGTGGTTGAAGTCACTGAAAATGGGATAG...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp AGTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCATGCACAGCTTTTCCTaGTTTTCTGGCATCCCTTTT +
Preference number: 4 (lower is better)
Translates to: SKERLLQLEYPWGFSSISMHSFS*FSGIPF
Trigger: AAAAGGGATGCCAGAAAATCAGGAAAAGCTGTGCAT...GCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR TCA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCTTCCACATCAGTGTCTaGTGTCCCCAGAACAACTGC +
Preference number: 4 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSFHISV*CPQNNC
Trigger: GCAGTTGTTCTGGGGACATCAGACACTGATGTGGAA...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp GGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATAAATAGTAGGTCTGCTTaGACTGAGAGCACCTCAGCG +
Preference number: 4 (lower is better)
Translates to: GHYVEEADDRECREYYKINSRSA*TESTSA
Trigger: CGCTGAGGTGCTCTCAGTGCAAGCAGACCTACTATT...TATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR GCA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCAATAGTAGGTCTGCTTaGACTGAGAGCACCTCAGCG +
Preference number: 4 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSNSRSA*TESTSA
Trigger: CGCTGAGGTGCTCTCAGTGCAAGCAGACCTACTATT...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGGCTCCAATTCCCTTCTaGTGGGATAACATTGGCTAC +
Preference number: 4 (lower is better)
Translates to: PYNRFHSISSILPICLKMAPIPF*WDNIGY
Trigger: GTAGCCAATGTTATCCCAGCAGAAGGGAATTGGAGC...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAGTACTTGCTAAGGGATaGCTGAAGTTCAGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIVLAKG*LKFSKL
Trigger: AAGCTTGCTGAACTTCAGGCATCCCTTAGCAAGTAC...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp AGTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCTCTATCCTGCCAATATaGCTGAAGATGTCCTATTGG +
Preference number: 4 (lower is better)
Translates to: SKERLLQLEYPWGFSSISSILPI*LKMSYW
Trigger: CCAATAGGACATCTTCAGGCATATTGGCAGGATAGA...GCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp ACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATTACACTCATCGAGGCCTaGAAAGAGGCAAGAGGACCG +
Preference number: 4 (lower is better)
Translates to: TLCGRGRRQRMQGILQNITLIEA*KEARGP
Trigger: CGGTCCTCTTGCCTCTTTCCAGGCCTCGATGAGTGT...AATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAGCCCTGGATTACTTATaGACAAGGAATTCTCGACCA +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIALDYL*TRNSRP
Trigger: TGGTCGAGAATTCCTTGTCCATAAGTAATCCAGGGC...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp GTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCATTCTTTGACATGCTGTaGAGCAATAGTAGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: VRKGYYNWNTPGGSVPLAFFDML*SNSRSA
Trigger: AGCAGACCTACTATTGCTCCACAGCATGTCAAAGAA...TGCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGCACGTAGAAGTCCCCTaGGTGTTTGAATTCGGTAAC +
Preference number: 4 (lower is better)
Translates to: PYNRFHSISSILPICLKMHVEVP*VFEFGN
Trigger: GTTACCGAATTCAAACACCCAGGGGACTTCTACGTG...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp GTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCAGAACATCTAATAATTTaGAAAGGAAGCGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: VRKGYYNWNTPGGSVPLAEHLII*KGSARW
Trigger: CCACCTGGCGCTTCCTTTCCAAATTATTAGATGTTC...TGCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAAACCTAATAGGAGAATaGCAGGCAGGCAAAAACGGA +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGINLIGE*QAGKNG
Trigger: TCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTT...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp AAAGCAAAGGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTGCAAAGGACATTATGTaGAAGAGGCAGACGACAGAG +
Preference number: 4 (lower is better)
Translates to: KAKDIMWKRQTTENAGNIAKDIM*KRQTTE
Trigger: CTCTGTCGTCTGCCTCTTCCACATAATGTCCTTTGC...AATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCCTTTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGGCCCGGAAAAGCTACTaGCACACAGCAGGAACTCCT +
Preference number: 4 (lower is better)
Translates to: SVPLAVAKENDQINLQKQARKSY*HTAGTP
Trigger: AGGAGTTCCTGCTGTGTGCCAGTAGCTTTTCCGGGC...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR TCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTGAGGTCCTAAGGAGGTaGAGAGCCCTGGATTACTTA +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSEVLRR*RALDYL
Trigger: TAAGTAATCCAGGGCTCTTCACCTCCTTAGGACCTC...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTTTGTGGAAATTTGGCTaGACAGGCCTGCACACGATG +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSLWKFG*TGLHTM
Trigger: CATCGTGTGCAGGCCTGTTCAGCCAAATTTCCACAA...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATACATCAACGTTTTGTATaGTTGCTCTGTTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIHQRFV*LLCSRS
Trigger: AGACCTGGAACAGAGCAATCATACAAAACGTTGATG...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATCCACTTTGCAGTTGTTaGCAAAAGAAGTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDPLCSC*QKKSSG
Trigger: ACCAGAAGACTTCTTTTGTCAACAACTGCAAAGTGG...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp ACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATTGAGCGTGGAGGCAACTaGTCACAGTACTTGCTAAGG +
Preference number: 4 (lower is better)
Translates to: TLCGRGRRQRMQGILQNIERGGN*SQYLLR
Trigger: CCTTAGCAAGTACTGTGATCAGTTGCCTCCACGCTC...AATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR TCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATATGGCACCGTATTCCCTaGAAGGGAAGGTTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIWHRIP*KGRFKN
Trigger: ATTTTTAAACCTTCCCTTTCAGGGAATACGGTGCCA...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTCTTCCATTGCTCAGCTaGAGAGGTAGCTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSLPLLS*RGSLKS
Trigger: GGACTTCAAGCTACCTCTTCAGCTGAGCAATGGAAG...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATATGCACAGCTTTTCCTaGTTTTCTGGCATCCCTTTT +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDMHSFS*FSGIPF
Trigger: AAAAGGGATGCCAGAAAATCAGGAAAAGCTGTGCAT...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp GACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATTTCCACATCAGTGTCTaGTGTCCCCAGAACAACTGC +
Preference number: 4 (lower is better)
Translates to: DIMWKRQTTENAGNITKYFHISV*CPQNNC
Trigger: GCAGTTGTTCTGGGGACATCAGACACTGATGTGGAA...ATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR GCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAGTCTCTTCTTTGACATaGTGTGGAGCAATAGTAGGT +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIVSSLT*CGAIVG
Trigger: ACCTACTATTGCTCCACAGCATGTCAAAGAAGAGAC...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp GTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCAACATGTGCCTTCTTTTaGTGCACATCAACGTTTTGT +
Preference number: 4 (lower is better)
Translates to: VRKGYYNWNTPGGSVPLATCAFF*CTSTFC
Trigger: ACAAAACGTTGATGTGCAGCAAAAGAAGGCACATGT...TGCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATATCAACCACTCTGGCTTaGAATTTTATCCCAGCAACA +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGISTTLA*NFIPAT
Trigger: TGTTGCTGGGATAAAATTGCAAGCCAGAGTGGTTGA...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGGTATTTGGCACAGCATaGGTCTCCAATTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: PYNRFHSISSILPICLKMVFGTA*VSNSWS
Trigger: AGACCAAGAATTGGAGACGCATGCTGTGCCAAATAC...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGCATACAGCACCGTGCTaGCTCACTAAGGAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SVPLAVAKENDQINLQKQHTAPC*LTKEAG
Trigger: TCCAGCTTCCTTAGTGAGGCAGCACGGTGCTGTATG...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGGCCCTGGATTACTTATaGACAAGGAATTCTCGACCA +
Preference number: 4 (lower is better)
Translates to: PYNRFHSISSILPICLKMALDYL*TRNSRP
Trigger: TGGTCGAGAATTCCTTGTCCATAAGTAATCCAGGGC...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTAATAGGCCACAGCGATaGCAAGTTGTGGACCGAAGA +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSNRPQR*QVVDRR
Trigger: TCTTCGGTCCACAACTTGCCATCGCTGTGGCCTATT...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATTTCTTTGACATGCTGTaGAGCAATAGTAGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDFFDML*SNSRSA
Trigger: AGCAGACCTACTATTGCTCCACAGCATGTCAAAGAA...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGAAGTTTGTGGAAATTTaGCTGAACAGGCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: PYNRFHSISSILPICLKMKFVEI*LNRPAH
Trigger: GTGTGCAGGCCTGTTCAGCCAAATTTCCACAAACTT...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp GGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATACACGTAGAAGTCCCCTaGGTGTTTGAATTCGGTAAC +
Preference number: 4 (lower is better)
Translates to: GHYVEEADDRECREYYKIHVEVP*VFEFGN
Trigger: GTTACCGAATTCAAACACCCAGGGGACTTCTACGTG...TATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATCCAATTCCCTTCTGCTaGGATAACATTGGCTACAAA +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDPIPFC*DNIGYK
Trigger: TTTGTAGCCAATGTTATCCCAGCAGAAGGGAATTGG...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp AGTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCTGTCGACAATCTTTATaGAGCAGTACTGCTCCATTA +
Preference number: 4 (lower is better)
Translates to: SKERLLQLEYPWGFSSISCRQSL*SSTAPL
Trigger: TAATGGAGCAGTACTGCTCCATAAAGATTGTCGACA...GCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp AGTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCTATATCACCAATGGCTaGATAAAAATCAGAGCGTGG +
Preference number: 4 (lower is better)
Translates to: SKERLLQLEYPWGFSSISYITNG*IKIRAW
Trigger: CCACGCTCTGATTTTTATCCAGCCATTGGTGATATA...GCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTCACCCAAGGGAACACTaGTTTCTTTCACGTCACTGG +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSHPREH*FLSRHW
Trigger: CCAGTGACGTGAAAGAAACCAGTGTTCCCTTGGGTG...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp GTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCAACAACATCTACTGTTTaGTCAACACCAAGTTCAACC +
Preference number: 4 (lower is better)
Translates to: VRKGYYNWNTPGGSVPLATTSTV*STPSST
Trigger: GGTTGAACTTGGTGTTGACCAAACAGTAGATGTTGT...TGCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATATTAGGTAACTTCTGCTaGCAGTGTTCTGCTAATGAC +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGILGNFC*QCSAND
Trigger: GTCATTAGCAGAACACTGCCAGCAGAAGTTACCTAA...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATCCAGCAACACACATCTaGAATCTTGTTATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDPATHI*NLVMAS
Trigger: AGAAGCCATAACAAGATTCCAGATGTGTGTTGCTGG...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATGAACATCTAATAATTTaGAAAGGAAGCGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDEHLII*KGSARW
Trigger: CCACCTGGCGCTTCCTTTCCAAATTATTAGATGTTC...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp AAAGCAAAGGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTAACCTAATAGGAGAATaGCAGGCAGGCAAAAACGGA +
Preference number: 4 (lower is better)
Translates to: KAKDIMWKRQTTENAGNINLIGE*QAGKNG
Trigger: TCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTT...AATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCCTTTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTCTTCTCCAGTTAGAGTaGTCCAGAGGTCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSLLQLE*SRGQTL
Trigger: CAGAGTCTGACCTCTGGACCACTCTAACTGGAGAAG...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR TCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTCAACTACTTCTCCGTTaGTGCCATTCGGGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSQLLLR*CHSGLK
Trigger: CTTCAAACCCGAATGGCATCAACGGAGAAGTAGTTG...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp ACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATTGCTCTGTTCCAGGTCTaGTCAACAGTGTACTTGGCA +
Preference number: 4 (lower is better)
Translates to: TLCGRGRRQRMQGILQNIALFQV*STVYLA
Trigger: TGCCAAGTACACTGTTGATCAGACCTGGAACAGAGC...AATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR TCA 90 bp GTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCAAGTCAATGTTCCTGTTaGGGTGGTAAATTCTGTTTA +
Preference number: 4 (lower is better)
Translates to: VRKGYYNWNTPGGSVPLASQCSC*GGKFCL
Trigger: TAAACAGAATTTACCACCTCAACAGGAACATTGACT...TGCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR TCA 90 bp GACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATAAGTCTTCTGGTGTTTaGATGTGGGCAACCACACCA +
Preference number: 4 (lower is better)
Translates to: DIMWKRQTTENAGNITKYKSSGV*MWATTP
Trigger: TGGTGTGGTTGCCCACATTCAAACACCAGAAGACTT...ATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR TCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTAAGTCTTCTGGTGTTTaGATGTGGGCAACCACACCA +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSKSSGV*MWATTP
Trigger: TGGTGTGGTTGCCCACATTCAAACACCAGAAGACTT...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATATTGGTAAGATTTCCTTaGCTAAAGCACGATACCAAC +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGILVRFP*LKHDTN
Trigger: GTTGGTATCGTGCTTTAGTCAAGGAAATCTTACCAA...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp AAAGCAAAGGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTTGGCACCGTATTCCCTaGAAGGGAAGGTTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: KAKDIMWKRQTTENAGNIWHRIP*KGRFKN
Trigger: ATTTTTAAACCTTCCCTTTCAGGGAATACGGTGCCA...AATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCCTTTGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR TCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTAAGTGGAGAGATCGGTaGGTTCAACTCCTATCCCAT +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSKWRDR*VQLLSH
Trigger: ATGGGATAGGAGTTGAACTCACCGATCTCTCCACTT...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGGTCTCTTCTTTGACATaGTGTGGAGCAATAGTAGGT +
Preference number: 4 (lower is better)
Translates to: PYNRFHSISSILPICLKMVSSLT*CGAIVG
Trigger: ACCTACTATTGCTCCACAGCATGTCAAAGAAGAGAC...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAACGTTTTGTATGATTaGTCTGTTCCAGGTCTGATC +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDNVLYD*SVPGLI
Trigger: GATCAGACCTGGAACAGAGCAATCATACAAAACGTT...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAACATGTGCCTTCTTTTaGTGCACATCAACGTTTTGT +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGITCAFF*CTSTFC
Trigger: ACAAAACGTTGATGTGCAGCAAAAGAAGGCACATGT...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCGTACTTGCTAAGGGATaGCTGAAGTTCAGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSVLAKG*LKFSKL
Trigger: AAGCTTGCTGAACTTCAGGCATCCCTTAGCAAGTAC...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp AGTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCACACACTTTATAGCTTaGATTGGCAATTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: SKERLLQLEYPWGFSSISTHFIA*IGNSNN
Trigger: GTTGTTGGAATTGCCAATGCAAGCTATAAAGTGTGT...GCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGCCATTAGGTAACTTCTaGTGGCAGTGTTCTGCTAAT +
Preference number: 4 (lower is better)
Translates to: PYNRFHSISSILPICLKMPLGNF*WQCSAN
Trigger: ATTAGCAGAACACTGCCAGCAGAAGTTACCTAATGG...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp GGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATCTATCGTCTTCCATTaGTCAGCTGAAGAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: GHYVEEADDRECREYYKISIVFH*SAEEVA
Trigger: AGCTACCTCTTCAGCTGAGCAATGGAAGACGATAGA...TATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR GCA 90 bp AAAGCAAAGGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTTGTCCCCAGAACAACTaGACGATACCAAAAATCATC +
Preference number: 4 (lower is better)
Translates to: KAKDIMWKRQTTENAGNICPQNN*TIPKII
Trigger: GATGATTTTTGGTATCGTGCAGTTGTTCTGGGGACA...AATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCCTTTGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp GGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATAAGCCTGAAATTAGGGTaGTTAGGAAGTGTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GHYVEEADDRECREYYKISLKLG*LGSVPG
Trigger: TCCTGGAACACTTCCTAACCACCCTAATTTCAGGCT...TATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp GTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCAAAGCTGGCAGAGAGTTaGTTCATGTATTCTAAAACT +
Preference number: 4 (lower is better)
Translates to: VRKGYYNWNTPGGSVPLAKLAES*FMYSKT
Trigger: AGTTTTAGAATACATGAACCAACTCTCTGCCAGCTT...TGCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp AGTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCATGTTTCTTTTAAGCTaGCAGAGAGTTGGTTCATGT +
Preference number: 4 (lower is better)
Translates to: SKERLLQLEYPWGFSSISMFLLS*QRVGSC
Trigger: ACATGAACCAACTCTCTGCCAGCTTAAAAGAAACAT...GCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGCCAATTCCCTTCTGCTaGGATAACATTGGCTACAAA +
Preference number: 4 (lower is better)
Translates to: PYNRFHSISSILPICLKMPIPFC*DNIGYK
Trigger: TTTGTAGCCAATGTTATCCCAGCAGAAGGGAATTGG...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAACAAAAGAAGTCTTCTaGTGTTTGAATGTGGGCAAC +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGITKEVF*CLNVGN
Trigger: GTTGCCCACATTCAAACACCAGAAGACTTCTTTTGT...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATACAAAAGAAGTCTTCTaGTGTTTGAATGTGGGCAAC +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDTKEVF*CLNVGN
Trigger: GTTGCCCACATTCAAACACCAGAAGACTTCTTTTGT...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATATATATCACCAATGGCTaGATAAAAATCAGAGCGTGG +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIYITNG*IKIRAW
Trigger: CCACGCTCTGATTTTTATCCAGCCATTGGTGATATA...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp AGTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCACAACTTTGGGATTATaGGACAAAGTCTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: SKERLLQLEYPWGFSSISTTLGL*DKVSSN
Trigger: GTTTGATGAGACTTTGTCCCATAATCCCAAAGTTGT...GCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp AGTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCCTTTATAGCTTGCATTaGCAATTCCAACAACTTTGG +
Preference number: 4 (lower is better)
Translates to: SKERLLQLEYPWGFSSISLYSLH*QFQQLW
Trigger: CCAAAGTTGTTGGAATTGCCAATGCAAGCTATAAAG...GCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATATTTCTTTCACGTCACTaGGTTTATCTGTCACCATAC +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIFLSRH*VYLSPY
Trigger: GTATGGTGACAGATAAACCCAGTGACGTGAAAGAAA...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGCACCCAAGGGAACACTaGTTTCTTTCACGTCACTGG +
Preference number: 4 (lower is better)
Translates to: SVPLAVAKENDQINLQKQHPREH*FLSRHW
Trigger: CCAGTGACGTGAAAGAAACCAGTGTTCCCTTGGGTG...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp GTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCATCTGGAATCTTGTTATaGCTTCTTCAGACCAATGTT +
Preference number: 4 (lower is better)
Translates to: VRKGYYNWNTPGGSVPLASGILL*LLQTNV
Trigger: AACATTGGTCTGAAGAAGCCATAACAAGATTCCAGA...TGCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp AAAGCAAAGGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTCCAGCAACACACATCTaGAATCTTGTTATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: KAKDIMWKRQTTENAGNIPATHI*NLVMAS
Trigger: AGAAGCCATAACAAGATTCCAGATGTGTGTTGCTGG...AATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCCTTTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGCCAGCAACACACATCTaGAATCTTGTTATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PYNRFHSISSILPICLKMPATHI*NLVMAS
Trigger: AGAAGCCATAACAAGATTCCAGATGTGTGTTGCTGG...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCTCTTGGTCTATAGGGTaGTCGACTTTTCGGAGCATT +
Preference number: 4 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSSWSIG*STFRSI
Trigger: AATGCTCCGAAAAGTCGACCACCCTATAGACCAAGA...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCCATCACTTGTGTATTTaGCACAGCATGCGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSHHLCI*HSMRLQ
Trigger: TTGGAGACGCATGCTGTGCCAAATACACAAGTGATG...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR TCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATACTGAATTGTCTTCCTaGCTAGCCAAATATTGTTTG +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDTELSS*LAKYCL
Trigger: CAAACAATATTTGGCTAGTCAGGAAGACAATTCAGT...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGCAACTACTTCTCCGTTaGTGCCATTCGGGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: SVPLAVAKENDQINLQKQQLLLR*CHSGLK
Trigger: CTTCAAACCCGAATGGCATCAACGGAGAAGTAGTTG...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR TCA 90 bp GGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATACATCAACGTTTTGTATaGTTGCTCTGTTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GHYVEEADDRECREYYKIHQRFV*LLCSRS
Trigger: AGACCTGGAACAGAGCAATCATACAAAACGTTGATG...TATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR TCA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCCATCAACGTTTTGTATaGTTGCTCTGTTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSHQRFV*LLCSRS
Trigger: AGACCTGGAACAGAGCAATCATACAAAACGTTGATG...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR TCA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGAAGTCTTCTGGTGTTTaGATGTGGGCAACCACACCA +
Preference number: 4 (lower is better)
Translates to: SVPLAVAKENDQINLQKQKSSGV*MWATTP
Trigger: TGGTGTGGTTGCCCACATTCAAACACCAGAAGACTT...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR TCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATACCACCACTTTCACTGTaGTTATTTTGTTCTGTACAA +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIPPLSL*LFCSVQ
Trigger: TTGTACAGAACAAAATAATCACAGTGAAAGTGGTGG...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCTGGCACCGTATTCCCTaGAAGGGAAGGTTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSWHRIP*KGRFKN
Trigger: ATTTTTAAACCTTCCCTTTCAGGGAATACGGTGCCA...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR TCA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGAAGTGGAGAGATCGGTaGGTTCAACTCCTATCCCAT +
Preference number: 4 (lower is better)
Translates to: SVPLAVAKENDQINLQKQKWRDR*VQLLSH
Trigger: ATGGGATAGGAGTTGAACTCACCGATCTCTCCACTT...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR TCA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCCTCTTAGAGAGAAGGTaGACGTTTGCATTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSLLERR*TFAFEG
Trigger: TCCTTCAAATGCAAACGTTCACCTTCTCTCTAAGAG...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR TCA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCAAGATGTCCTATTGGTaGTCACAGAAGAGGCGAAAA +
Preference number: 4 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSKMSYW*SQKRRK
Trigger: TTTTCGCCTCTTCTGTGATCACCAATAGGACATCTT...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGTGTGCCTTCTTTTGCTaGACATCAACGTTTTGTATG +
Preference number: 4 (lower is better)
Translates to: PYNRFHSISSILPICLKMCAFFC*TSTFCM
Trigger: CATACAAAACGTTGATGTGCAGCAAAAGAAGGCACA...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATATTTATGGAGCAGTACTaGTCCATTAACAGTGGTTTA +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIFMEQY*SINSGL
Trigger: TAAACCACTGTTAATGGAGCAGTACTGCTCCATAAA...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp GACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATGTACTTGCTAAGGGATaGCTGAAGTTCAGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: DIMWKRQTTENAGNITKYVLAKG*LKFSKL
Trigger: AAGCTTGCTGAACTTCAGGCATCCCTTAGCAAGTAC...ATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR GCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATACACACTTTATAGCTTaGATTGGCAATTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDTHFIA*IGNSNN
Trigger: GTTGTTGGAATTGCCAATGCAAGCTATAAAGTGTGT...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp AAAGCAAAGGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTCATTCGGAGTTCATCTaGAGTAACTTCTTCGATGTT +
Preference number: 4 (lower is better)
Translates to: KAKDIMWKRQTTENAGNIHSEFI*SNFFDV
Trigger: AACATCGAAGAAGTTACTGCAGATGAACTCCGAATG...AATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCCTTTGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR GCA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGCATTCGGAGTTCATCTaGAGTAACTTCTTCGATGTT +
Preference number: 4 (lower is better)
Translates to: PYNRFHSISSILPICLKMHSEFI*SNFFDV
Trigger: AACATCGAAGAAGTTACTGCAGATGAACTCCGAATG...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp GGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATCAACCACTCTGGCTTaGAATTTTATCCCAGCAACA +
Preference number: 4 (lower is better)
Translates to: GHYVEEADDRECREYYKISTTLA*NFIPAT
Trigger: TGTTGCTGGGATAAAATTGCAAGCCAGAGTGGTTGA...TATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR GCA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCTCAACCACTCTGGCTTaGAATTTTATCCCAGCAACA +
Preference number: 4 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSSTTLA*NFIPAT
Trigger: TGTTGCTGGGATAAAATTGCAAGCCAGAGTGGTTGA...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTTCTATCGTCTTCCATTaGTCAGCTGAAGAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSSIVFH*SAEEVA
Trigger: AGCTACCTCTTCAGCTGAGCAATGGAAGACGATAGA...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAATTCAGCTGTCAACATaGACAGCTTTTCCTGATTTT +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIIQLST*TAFPDF
Trigger: AAAATCAGGAAAAGCTGTGCATGTTGACAGCTGAAT...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp GTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCAGACTTTTCGGAGCATTaGAGTATTCTAATAATTCAG +
Preference number: 4 (lower is better)
Translates to: VRKGYYNWNTPGGSVPLADFSEH*SILIIQ
Trigger: CTGAATTATTAGAATACTGCAATGCTCCGAAAAGTC...TGCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTGTATTTGGCACAGCATaGGTCTCCAATTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSVFGTA*VSNSWS
Trigger: AGACCAAGAATTGGAGACGCATGCTGTGCCAAATAC...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCTGTCCCCAGAACAACTaGACGATACCAAAAATCATC +
Preference number: 4 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSCPQNN*TIPKII
Trigger: GATGATTTTTGGTATCGTGCAGTTGTTCTGGGGACA...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAGCAGACGACAGAGAATaGAGGGAATATTACAAAATA +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIADDRE*REYYKI
Trigger: TATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGC...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTAGCCTGAAATTAGGGTaGTTAGGAAGTGTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSSLKLG*LGSVPG
Trigger: TCCTGGAACACTTCCTAACCACCCTAATTTCAGGCT...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGGGAGGTGAAGAGCCCTaGATTACTTATGGACAAGGA +
Preference number: 4 (lower is better)
Translates to: SVPLAVAKENDQINLQKQGGEEP*ITYGQG
Trigger: TCCTTGTCCATAAGTAATCCAGGGCTCTTCACCTCC...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp GGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATTCTTTGACATGCTGTaGAGCAATAGTAGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: GHYVEEADDRECREYYKIFFDML*SNSRSA
Trigger: AGCAGACCTACTATTGCTCCACAGCATGTCAAAGAA...TATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTAAGTTTGTGGAAATTTaGCTGAACAGGCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSKFVEI*LNRPAH
Trigger: GTGTGCAGGCCTGTTCAGCCAAATTTCCACAAACTT...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAAAGCTGGCAGAGAGTTaGTTCATGTATTCTAAAACT +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIKLAES*FMYSKT
Trigger: AGTTTTAGAATACATGAACCAACTCTCTGCCAGCTT...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATATGTTTCTTTTAAGCTaGCAGAGAGTTGGTTCATGT +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDMFLLS*QRVGSC
Trigger: ACATGAACCAACTCTCTGCCAGCTTAAAAGAAACAT...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp GGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATAGATCAACAGTGTACTTaGCAATACAAACTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: GHYVEEADDRECREYYKIDQQCT*QYKLPP
Trigger: AGGGGGAAGTTTGTATTGCCAAGTACACTGTTGATC...TATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp GTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCAAACATATATCACCAATaGCTGGATAAAAATCAGAGC +
Preference number: 4 (lower is better)
Translates to: VRKGYYNWNTPGGSVPLANIYHQ*LDKNQS
Trigger: GCTCTGATTTTTATCCAGCCATTGGTGATATATGTT...TGCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAACAACTTTGGGATTATaGGACAAAGTCTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGITTLGL*DKVSSN
Trigger: GTTTGATGAGACTTTGTCCCATAATCCCAAAGTTGT...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATACAACTTTGGGATTATaGGACAAAGTCTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDTTLGL*DKVSSN
Trigger: GTTTGATGAGACTTTGTCCCATAATCCCAAAGTTGT...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATCTTTATAGCTTGCATTaGCAATTCCAACAACTTTGG +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDLYSLH*QFQQLW
Trigger: CCAAAGTTGTTGGAATTGCCAATGCAAGCTATAAAG...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATACTTTATAGCTTGCATTaGCAATTCCAACAACTTTGG +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGILYSLH*QFQQLW
Trigger: CCAAAGTTGTTGGAATTGCCAATGCAAGCTATAAAG...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGTTTCTTTCACGTCACTaGGTTTATCTGTCACCATAC +
Preference number: 4 (lower is better)
Translates to: PYNRFHSISSILPICLKMFLSRH*VYLSPY
Trigger: GTATGGTGACAGATAAACCCAGTGACGTGAAAGAAA...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATTCTGGAATCTTGTTATaGCTTCTTCAGACCAATGTT +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDSGILL*LLQTNV
Trigger: AACATTGGTCTGAAGAAGCCATAACAAGATTCCAGA...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATATCTGGAATCTTGTTATaGCTTCTTCAGACCAATGTT +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGISGILL*LLQTNV
Trigger: AACATTGGTCTGAAGAAGCCATAACAAGATTCCAGA...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTTCTTGGTCTATAGGGTaGTCGACTTTTCGGAGCATT +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSSWSIG*STFRSI
Trigger: AATGCTCCGAAAAGTCGACCACCCTATAGACCAAGA...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGTGCGTCTCCAATTCTTaGTCTATAGGGTGGTCGACT +
Preference number: 4 (lower is better)
Translates to: SVPLAVAKENDQINLQKQCVSNS*SIGWST
Trigger: AGTCGACCACCCTATAGACCAAGAATTGGAGACGCA...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTCATCACTTGTGTATTTaGCACAGCATGCGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSHHLCI*HSMRLQ
Trigger: TTGGAGACGCATGCTGTGCCAAATACACAAGTGATG...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp GGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATAGAACATCTAATAATTTaGAAAGGAAGCGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GHYVEEADDRECREYYKIEHLII*KGSARW
Trigger: CCACCTGGCGCTTCCTTTCCAAATTATTAGATGTTC...TATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR TCA 90 bp AAAGCAAAGGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACTGAATTGTCTTCCTaGCTAGCCAAATATTGTTTG +
Preference number: 4 (lower is better)
Translates to: KAKDIMWKRQTTENAGNITELSS*LAKYCL
Trigger: CAAACAATATTTGGCTAGTCAGGAAGACAATTCAGT...AATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCCTTTGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR TCA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGACTGAATTGTCTTCCTaGCTAGCCAAATATTGTTTG +
Preference number: 4 (lower is better)
Translates to: PYNRFHSISSILPICLKMTELSS*LAKYCL
Trigger: CAAACAATATTTGGCTAGTCAGGAAGACAATTCAGT...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR TCA 90 bp TACAGATTTCTAAGGTTGTGGACACAGCAGGAGAGGGAACATAAAGTTCCTTCTCCACCACTTTCACTGTaGTTATTTTGTTCTGTACAA +
Preference number: 4 (lower is better)
Translates to: YRFLRLWTQQEREHKVPSPPLSL*LFCSVQ
Trigger: TTGTACAGAACAAAATAATCACAGTGAAAGTGGTGG...AGAAGGAACTTTATGTTCCCTCTCCTGCTGTGTCCACAACCTTAGAAATCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR TCA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGCCACCACTTTCACTGTaGTTATTTTGTTCTGTACAA +
Preference number: 4 (lower is better)
Translates to: PYNRFHSISSILPICLKMPPLSL*LFCSVQ
Trigger: TTGTACAGAACAAAATAATCACAGTGAAAGTGGTGG...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR TCA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGTTGCTAACACTGACATaGGGCGTCTCGGATTTATCA +
Preference number: 4 (lower is better)
Translates to: SVPLAVAKENDQINLQKQLLTLT*GVSDLS
Trigger: TGATAAATCCGAGACGCCTCATGTCAGTGTTAGCAA...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR TCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTATGCACAGCTTTTCCTaGTTTTCTGGCATCCCTTTT +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSMHSFS*FSGIPF
Trigger: AAAAGGGATGCCAGAAAATCAGGAAAAGCTGTGCAT...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGGTCAAACGAAGGCACTaGATCCACATGCAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SVPLAVAKENDQINLQKQVKRRH*IHMQVS
Trigger: AGAAACTTGCATGTGGATTCAGTGCCTTCGTTTGAC...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCAACGTTTTGTATGATTaGTCTGTTCCAGGTCTGATC +
Preference number: 4 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSNVLYD*SVPGLI
Trigger: GATCAGACCTGGAACAGAGCAATCATACAAAACGTT...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp TACAGATTTCTAAGGTTGTGGACACAGCAGGAGAGGGAACATAAAGTTCCTTCTTTTATGGAGCAGTACTaGTCCATTAACAGTGGTTTA +
Preference number: 4 (lower is better)
Translates to: YRFLRLWTQQEREHKVPSFMEQY*SINSGL
Trigger: TAAACCACTGTTAATGGAGCAGTACTGCTCCATAAA...AGAAGGAACTTTATGTTCCCTCTCCTGCTGTGTCCACAACCTTAGAAATCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR GCA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGTTTATGGAGCAGTACTaGTCCATTAACAGTGGTTTA +
Preference number: 4 (lower is better)
Translates to: PYNRFHSISSILPICLKMFMEQY*SINSGL
Trigger: TAAACCACTGTTAATGGAGCAGTACTGCTCCATAAA...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTCCATTAGGTAACTTCTaGTGGCAGTGTTCTGCTAAT +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSPLGNF*WQCSAN
Trigger: ATTAGCAGAACACTGCCAGCAGAAGTTACCTAATGG...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATGACTTTTCGGAGCATTaGAGTATTCTAATAATTCAG +
Preference number: 4 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDDFSEH*SILIIQ
Trigger: CTGAATTATTAGAATACTGCAATGCTCCGAAAAGTC...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTTGTCCCCAGAACAACTaGACGATACCAAAAATCATC +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSCPQNN*TIPKII
Trigger: GATGATTTTTGGTATCGTGCAGTTGTTCTGGGGACA...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGAGCCTGAAATTAGGGTaGTTAGGAAGTGTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SVPLAVAKENDQINLQKQSLKLG*LGSVPG
Trigger: TCCTGGAACACTTCCTAACCACCCTAATTTCAGGCT...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp ACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATTGCCCTGGATTACTTATaGACAAGGAATTCTCGACCA +
Preference number: 4 (lower is better)
Translates to: TLCGRGRRQRMQGILQNIALDYL*TRNSRP
Trigger: TGGTCGAGAATTCCTTGTCCATAAGTAATCCAGGGC...AATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp AAAGCAAAGGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTCTTAGTAACTCCAAGTaGACAGTCACTCTTATTGTT +
Preference number: 4 (lower is better)
Translates to: KAKDIMWKRQTTENAGNILSNSK*TVTLIV
Trigger: AACAATAAGAGTGACTGTCCACTTGGAGTTACTAAG...AATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCCTTTGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp AAAGCAAAGGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTATGTTTCTTTTAAGCTaGCAGAGAGTTGGTTCATGT +
Preference number: 4 (lower is better)
Translates to: KAKDIMWKRQTTENAGNIMFLLS*QRVGSC
Trigger: ACATGAACCAACTCTCTGCCAGCTTAAAAGAAACAT...AATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCCTTTGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTGATCAACAGTGTACTTaGCAATACAAACTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSDQQCT*QYKLPP
Trigger: AGGGGGAAGTTTGTATTGCCAAGTACACTGTTGATC...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAAACATATATCACCAATaGCTGGATAAAAATCAGAGC +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGINIYHQ*LDKNQS
Trigger: GCTCTGATTTTTATCCAGCCATTGGTGATATATGTT...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTTTAGGTAACTTCTGCTaGCAGTGTTCTGCTAATGAC +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSLGNFC*QCSAND
Trigger: GTCATTAGCAGAACACTGCCAGCAGAAGTTACCTAA...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATATATAGTTTTATCCACTaGCAATTCTATCGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIYSFIH*QFYRLP
Trigger: TGGAAGACGATAGAATTGCCAGTGGATAAAACTATA...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp ACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATTCATCACTTGTGTATTTaGCACAGCATGCGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: TLCGRGRRQRMQGILQNIHHLCI*HSMRLQ
Trigger: TTGGAGACGCATGCTGTGCCAAATACACAAGTGATG...AATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR TCA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCTCTTCAGGATCACTTTaGTCTGCATTTTCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSSSGSL*SAFSFL
Trigger: TAAGAAGGAAAATGCAGATCAAAGTGATCCTGAAGA...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR TCA 90 bp ACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATTCCACTTTGCAGTTGTTaGCAAAAGAAGTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: TLCGRGRRQRMQGILQNIPLCSC*QKKSSG
Trigger: ACCAGAAGACTTCTTTTGTCAACAACTGCAAAGTGG...AATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR TCA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGACAGCAGAAGCATTATaGCCAAACCTCAGGTCATTA +
Preference number: 4 (lower is better)
Translates to: SVPLAVAKENDQINLQKQTAEAL*PNLRSL
Trigger: TAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGT...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR GCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTTGTGCCTTCTTTTGCTaGACATCAACGTTTTGTATG +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSCAFFC*TSTFCM
Trigger: CATACAAAACGTTGATGTGCAGCAAAAGAAGGCACA...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp ACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATTCCATTAGGTAACTTCTaGTGGCAGTGTTCTGCTAAT +
Preference number: 4 (lower is better)
Translates to: TLCGRGRRQRMQGILQNIPLGNF*WQCSAN
Trigger: ATTAGCAGAACACTGCCAGCAGAAGTTACCTAATGG...AATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR GCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTCATTCGGAGTTCATCTaGAGTAACTTCTTCGATGTT +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSHSEFI*SNFFDV
Trigger: AACATCGAAGAAGTTACTGCAGATGAACTCCGAATG...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp GGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATAATTCAGCTGTCAACATaGACAGCTTTTCCTGATTTT +
Preference number: 4 (lower is better)
Translates to: GHYVEEADDRECREYYKIIQLST*TAFPDF
Trigger: AAAATCAGGAAAAGCTGTGCATGTTGACAGCTGAAT...TATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR GCA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCATTCAGCTGTCAACATaGACAGCTTTTCCTGATTTT +
Preference number: 4 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSIQLST*TAFPDF
Trigger: AAAATCAGGAAAAGCTGTGCATGTTGACAGCTGAAT...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGGATCAACAGTGTACTTaGCAATACAAACTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: SVPLAVAKENDQINLQKQDQQCT*QYKLPP
Trigger: AGGGGGAAGTTTGTATTGCCAAGTACACTGTTGATC...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTTGTCGACAATCTTTATaGAGCAGTACTGCTCCATTA +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSCRQSL*SSTAPL
Trigger: TAATGGAGCAGTACTGCTCCATAAAGATTGTCGACA...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTTATATCACCAATGGCTaGATAAAAATCAGAGCGTGG +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSYITNG*IKIRAW
Trigger: CCACGCTCTGATTTTTATCCAGCCATTGGTGATATA...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCCAATTCCAACAACTTTaGGATTATGGGACAAAGTCT +
Preference number: 4 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSQFQQL*DYGTKS
Trigger: AGACTTTGTCCCATAATCCCAAAGTTGTTGGAATTG...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTTTTCTTTCACGTCACTaGGTTTATCTGTCACCATAC +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSFLSRH*VYLSPY
Trigger: GTATGGTGACAGATAAACCCAGTGACGTGAAAGAAA...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp GACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATACAACATCTACTGTTTaGTCAACACCAAGTTCAACC +
Preference number: 4 (lower is better)
Translates to: DIMWKRQTTENAGNITKYTTSTV*STPSST
Trigger: GGTTGAACTTGGTGTTGACCAAACAGTAGATGTTGT...ATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTACAACATCTACTGTTTaGTCAACACCAAGTTCAACC +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSTTSTV*STPSST
Trigger: GGTTGAACTTGGTGTTGACCAAACAGTAGATGTTGT...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGTTAGGTAACTTCTGCTaGCAGTGTTCTGCTAATGAC +
Preference number: 4 (lower is better)
Translates to: SVPLAVAKENDQINLQKQLGNFC*QCSAND
Trigger: GTCATTAGCAGAACACTGCCAGCAGAAGTTACCTAA...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp TACAGATTTCTAAGGTTGTGGACACAGCAGGAGAGGGAACATAAAGTTCCTTCTTATAGTTTTATCCACTaGCAATTCTATCGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: YRFLRLWTQQEREHKVPSYSFIH*QFYRLP
Trigger: TGGAAGACGATAGAATTGCCAGTGGATAAAACTATA...AGAAGGAACTTTATGTTCCCTCTCCTGCTGTGTCCACAACCTTAGAAATCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CCA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGTATAGTTTTATCCACTaGCAATTCTATCGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: PYNRFHSISSILPICLKMYSFIH*QFYRLP
Trigger: TGGAAGACGATAGAATTGCCAGTGGATAAAACTATA...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR TCA 90 bp GACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATAGTCAATGTTCCTGTTaGGGTGGTAAATTCTGTTTA +
Preference number: 4 (lower is better)
Translates to: DIMWKRQTTENAGNITKYSQCSC*GGKFCL
Trigger: TAAACAGAATTTACCACCTCAACAGGAACATTGACT...ATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR TCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTAGTCAATGTTCCTGTTaGGGTGGTAAATTCTGTTTA +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSSQCSC*GGKFCL
Trigger: TAAACAGAATTTACCACCTCAACAGGAACATTGACT...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp GACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATTCTTCAGGATCACTTTaGTCTGCATTTTCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: DIMWKRQTTENAGNITKYSSGSL*SAFSFL
Trigger: TAAGAAGGAAAATGCAGATCAAAGTGATCCTGAAGA...ATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR TCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTTCTTCAGGATCACTTTaGTCTGCATTTTCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSSSGSL*SAFSFL
Trigger: TAAGAAGGAAAATGCAGATCAAAGTGATCCTGAAGA...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR TCA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGTTGGTAAGATTTCCTTaGCTAAAGCACGATACCAAC +
Preference number: 4 (lower is better)
Translates to: SVPLAVAKENDQINLQKQLVRFP*LKHDTN
Trigger: GTTGGTATCGTGCTTTAGTCAAGGAAATCTTACCAA...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR TCA 90 bp GACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATTTGATGACCTCTGAGTaGACAGAAAAAGAAGATAAC +
Preference number: 4 (lower is better)
Translates to: DIMWKRQTTENAGNITKYLMTSE*TEKEDN
Trigger: GTTATCTTCTTTTTCTGTTCACTCAGAGGTCATCAA...ATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR GCA 90 bp ACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATTACATGTGCCTTCTTTTaGTGCACATCAACGTTTTGT +
Preference number: 4 (lower is better)
Translates to: TLCGRGRRQRMQGILQNITCAFF*CTSTFC
Trigger: ACAAAACGTTGATGTGCAGCAAAAGAAGGCACATGT...AATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR GCA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGCCACATCTAAGTAAATaGCCTAGCACATCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SVPLAVAKENDQINLQKQPHLSK*PSTSSF
Trigger: AAAGGAAGATGTGCTAGGGCATTTACTTAGATGTGG...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTCTTAGTAACTCCAAGTaGACAGTCACTCTTATTGTT +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSLSNSK*TVTLIV
Trigger: AACAATAAGAGTGACTGTCCACTTGGAGTTACTAAG...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGACAAAAGAAGTCTTCTaGTGTTTGAATGTGGGCAAC +
Preference number: 4 (lower is better)
Translates to: SVPLAVAKENDQINLQKQTKEVF*CLNVGN
Trigger: GTTGCCCACATTCAAACACCAGAAGACTTCTTTTGT...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTCAATTCCAACAACTTTaGGATTATGGGACAAAGTCT +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSQFQQL*DYGTKS
Trigger: AGACTTTGTCCCATAATCCCAAAGTTGTTGGAATTG...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR GCA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTGACTTTTCGGAGCATTaGAGTATTCTAATAATTCAG +
Preference number: 4 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSDFSEH*SILIIQ
Trigger: CTGAATTATTAGAATACTGCAATGCTCCGAAAAGTC...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CCA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGCTTAGTAACTCCAAGTaGACAGTCACTCTTATTGTT +
Preference number: 4 (lower is better)
Translates to: SVPLAVAKENDQINLQKQLSNSK*TVTLIV
Trigger: AACAATAAGAGTGACTGTCCACTTGGAGTTACTAAG...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CCA 90 bp ACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATTAACATATATCACCAATaGCTGGATAAAAATCAGAGC +
Preference number: 4 (lower is better)
Translates to: TLCGRGRRQRMQGILQNINIYHQ*LDKNQS
Trigger: GCTCTGATTTTTATCCAGCCATTGGTGATATATGTT...AATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS GCA 90 bp GGCGGTGATGGCGACTGCCGATGCTGGGAGCCCTGCCGCCTGGGATaGGCCCTGCACTTCCCTCGCCTCCAATCCCCAGTGCGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: GGDGDCRCWEPCRLG*ALHFPRLQSPVRPP
Trigger: AGGAGGGCGCACTGGGGATTGGAGGCGAGGGAAGTGCAGGGCGCATCCCAGGCGGCAGGGCTCCCAGCATCGGCAGTCGCCATCACCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS CCA 90 bp GGTCTGGCGGTGATGGCGACTGCCGATGCTGGGAGCCCTGCCGCCTaGGATGCGCCCTGCACTTCCCTCGCCTCCAATCCCCAGTGCGCC +
Preference number: 5 (lower is better)
Translates to: GLAVMATADAGSPAA*DAPCTSLASNPQCA
Trigger: GGCGCACTGGGGATTGGAGGCGAGGGAAGTGCAGGGCGCATCCCAGGCGGCAGGGCTCCCAGCATCGGCAGTCGCCATCACCGCCAGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS GCA 90 bp ATGGCGACTGCCGATGCTGGGAGCCCTGCCGCCTGGGATGCGCCCTaGACTTCCCTCGCCTCCAATCCCCAGTGCGCCCTCCTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: MATADAGSPAAWDAP*TSLASNPQCALLAS
Trigger: TGAGGCCAGGAGGGCGCACTGGGGATTGGAGGCGAGGGAAGTGCAGGGCGCATCCCAGGCGGCAGGGCTCCCAGCATCGGCAGTCGCCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS CCA 90 bp CCGAACCTGTCTCTGCGGTCTGGCGGTGATGGCGACTGCCGATGCTaGGAGCCCTGCCGCCTGGGATGCGCCCTGCACTTCCCTCGCCTC +
Preference number: 5 (lower is better)
Translates to: PNLSLRSGGDGDCRC*EPCRLGCALHFPRL
Trigger: GAGGCGAGGGAAGTGCAGGGCGCATCCCAGGCGGCAGGGCTCCCAGCATCGGCAGTCGCCATCACCGCCAGACCGCAGAGACAGGTTCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS TCA 90 bp AGGCAAGAGGACCGCGGATCCGAACCTGTCTCTGCGGTCTGGCGGTaGTGGCGACTGCCGATGCTGGGAGCCCTGCCGCCTGGGATGCGC +
Preference number: 5 (lower is better)
Translates to: RQEDRGSEPVSAVWR*WRLPMLGALPPGMR
Trigger: GCGCATCCCAGGCGGCAGGGCTCCCAGCATCGGCAGTCGCCATCACCGCCAGACCGCAGAGACAGGTTCGGATCCGCGGTCCTCTTGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS GCA 90 bp TCTCTGCGGTCTGGCGGTGATGGCGACTGCCGATGCTGGGAGCCCTaGCGCCTGGGATGCGCCCTGCACTTCCCTCGCCTCCAATCCCCA +
Preference number: 5 (lower is better)
Translates to: SLRSGGDGDCRCWEP*RLGCALHFPRLQSP
Trigger: TGGGGATTGGAGGCGAGGGAAGTGCAGGGCGCATCCCAGGCGGCAGGGCTCCCAGCATCGGCAGTCGCCATCACCGCCAGACCGCAGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS GCA 90 bp GATCCGAACCTGTCTCTGCGGTCTGGCGGTGATGGCGACTGCCGATaGTGGGAGCCCTGCCGCCTGGGATGCGCCCTGCACTTCCCTCGC +
Preference number: 5 (lower is better)
Translates to: DPNLSLRSGGDGDCR*WEPCRLGCALHFPR
Trigger: GCGAGGGAAGTGCAGGGCGCATCCCAGGCGGCAGGGCTCCCAGCATCGGCAGTCGCCATCACCGCCAGACCGCAGAGACAGGTTCGGATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS GCA 90 bp ACCGCGGATCCGAACCTGTCTCTGCGGTCTGGCGGTGATGGCGACTaGCGATGCTGGGAGCCCTGCCGCCTGGGATGCGCCCTGCACTTC +
Preference number: 5 (lower is better)
Translates to: TADPNLSLRSGGDGD*RCWEPCRLGCALHF
Trigger: GAAGTGCAGGGCGCATCCCAGGCGGCAGGGCTCCCAGCATCGGCAGTCGCCATCACCGCCAGACCGCAGAGACAGGTTCGGATCCGCGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS GCA 90 bp AGGCCTGCACACGATGCTGTGTGCAGACCAGTCTCTTCTTTGACATaGTGTGGAGCAATAGTAGGTCTGCTTGCACTGAGAGCACCTCAG +
Preference number: 5 (lower is better)
Translates to: RPAHDAVCRPVSSLT*CGAIVGLLALRAPQ
Trigger: CTGAGGTGCTCTCAGTGCAAGCAGACCTACTATTGCTCCACAGCATGTCAAAGAAGAGACTGGTCTGCACACAGCATCGTGTGCAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS GCA 90 bp ACCAGTCTCTTCTTTGACATGCTGTGGAGCAATAGTAGGTCTGCTTaGACTGAGAGCACCTCAGCGATCCAAATAGGCCACAGCGATGGC +
Preference number: 5 (lower is better)
Translates to: TSLFFDMLWSNSRSA*TESTSAIQIGHSDG
Trigger: GCCATCGCTGTGGCCTATTTGGATCGCTGAGGTGCTCTCAGTGCAAGCAGACCTACTATTGCTCCACAGCATGTCAAAGAAGAGACTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS CCA 90 bp TGCACACGATGCTGTGTGCAGACCAGTCTCTTCTTTGACATGCTGTaGAGCAATAGTAGGTCTGCTTGCACTGAGAGCACCTCAGCGATC +
Preference number: 5 (lower is better)
Translates to: CTRCCVQTSLFFDML*SNSRSACTESTSAI
Trigger: GATCGCTGAGGTGCTCTCAGTGCAAGCAGACCTACTATTGCTCCACAGCATGTCAAAGAAGAGACTGGTCTGCACACAGCATCGTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS TCA 90 bp CACAGCGATGGCAAGTTGTGGACCGAAGAGGAGGTCCTAAGGAGGTaGAGAGCCCTGGATTACTTATGGACAAGGAATTCTCGACCAACT +
Preference number: 5 (lower is better)
Translates to: HSDGKLWTEEEVLRR*RALDYLWTRNSRPT
Trigger: AGTTGGTCGAGAATTCCTTGTCCATAAGTAATCCAGGGCTCTTCACCTCCTTAGGACCTCCTCTTCGGTCCACAACTTGCCATCGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS-3UTR CAA 90 bp CTTCTCCAGTTAGAGTGGTCCAGAGGTCAGACTCTGTGCCCAAAGGCCAAAAGACCAACTACTTCTCCGTaGATGCCATTCGGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: LLQLEWSRGQTLCPKAKRPTTSP*MPFGFE
Trigger: TTCAAACCCGAATGGCATCAACGGAGAAGTAGTTGG...TCTTTTGGCCTTTGGGCACAGAGTCTGACCTCTGGACCACTCTAACTGGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CAA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATCACAGCGATGGCAAGTaGTGGACCGAAGAGGAGGTC +
Preference number: 5 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDHSDGK*WTEEEV
Trigger: GACCTCCTCTTCGGTCCACAACTTGCCATCGCTGTG...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS TCA 90 bp CCCACAGCAAAGCCTGCATCTAGGAGAACTTTGCTAACACTGACATaGGGCGTCTCGGATTTATCAATAAGCTCCACCAGGGAACTGTTT +
Preference number: 5 (lower is better)
Translates to: PTAKPASRRTLLTLT*GVSDLSISSTRELF
Trigger: AAACAGTTCCCTGGTGGAGCTTATTGATAAATCCGAGACGCCTCATGTCAGTGTTAGCAAAGTTCTCCTAGATGCAGGCTTTGCTGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS-3UTR CAA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCCACAGCGATGGCAAGTaGTGGACCGAAGAGGAGGTC +
Preference number: 5 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSHSDGK*WTEEEV
Trigger: GACCTCCTCTTCGGTCCACAACTTGCCATCGCTGTG...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAAAGTCCCCTGGGTGTTaGAATTCGGTAACCGTACCC +
Preference number: 5 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIKSPGC*NSVTVP
Trigger: GGGTACGGTTACCGAATTCAAACACCCAGGGGACTT...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAGCTAGAGGTGATTGGTaGCACTCTGCAAAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIARGDW*HSAKRQ
Trigger: CTGCCTCTTTGCAGAGTGCAACCAATCACCTCTAGC...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp AGTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCTCAGACTCCACGGCCTaGGATTTAAGCATACAGCAC +
Preference number: 5 (lower is better)
Translates to: SKERLLQLEYPWGFSSISSDSTA*DLSIQH
Trigger: GTGCTGTATGCTTAAATCCAAGGCCGTGGAGTCTGA...GCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTCACAGCGATGGCAAGTaGTGGACCGAAGAGGAGGTC +
Preference number: 5 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSHSDGK*WTEEEV
Trigger: GACCTCCTCTTCGGTCCACAACTTGCCATCGCTGTG...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATGAAGTCTTCTGGTGTTaGAATGTGGGCAACCACACC +
Preference number: 5 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDEVFWC*NVGNHT
Trigger: GGTGTGGTTGCCCACATTCAAACACCAGAAGACTTC...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATATGCGTCTCCAATTCTaGGTCTATAGGGTGGTCGAC +
Preference number: 5 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDMRLQF*VYRVVD
Trigger: GTCGACCACCCTATAGACCAAGAATTGGAGACGCAT...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp CTTCTCCAGTTAGAGTGGTCCAGAGGTCAGACTCTGTGCCCAAAGGCCAAAAGAACCAAAAATCATCACTaGTGTATTTGGCACAGCATG +
Preference number: 5 (lower is better)
Translates to: LLQLEWSRGQTLCPKAKRTKNHH*CIWHSM
Trigger: CATGCTGTGCCAAATACACAAGTGATGATTTTTGGT...TCTTTTGGCCTTTGGGCACAGAGTCTGACCTCTGGACCACTCTAACTGGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS TCA 90 bp AACGAAGGCACTGAATCCACATGCAAGTTTCTCTTAGAGAGAAGGTaGACGTTTGCATTTGAAGGAGTGATGCCTGGAAGCGCTATTTCC +
Preference number: 5 (lower is better)
Translates to: NEGTESTCKFLLERR*TFAFEGVMPGSAIS
Trigger: GGAAATAGCGCTTCCAGGCATCACTCCTTCAAATGCAAACGTTCACCTTCTCTCTAAGAGAAACTTGCATGTGGATTCAGTGCCTTCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS CCA 90 bp AGCAAGCTTTCGGCCACTTTGCAGTTGTTGACAAAAGAAGTCTTCTaGTGTTTGAATGTGGGCAACCACACCACAAAACTCATCACCTAC +
Preference number: 5 (lower is better)
Translates to: SKLSATLQLLTKEVF*CLNVGNHTTKLITY
Trigger: GTAGGTGATGAGTTTTGTGGTGTGGTTGCCCACATTCAAACACCAGAAGACTTCTTTTGTCAACAACTGCAAAGTGGCCGAAAGCTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS CCA 90 bp CTGAGCACAACATATATCACCAATGGCTGGATAAAAATCAGAGCGTaGAGGCAACTGATCACAGTACTTGCTAAGGGATGCCTGAAGTTC +
Preference number: 5 (lower is better)
Translates to: LSTTYITNGWIKIRA*RQLITVLAKGCLKF
Trigger: GAACTTCAGGCATCCCTTAGCAAGTACTGTGATCAGTTGCCTCCACGCTCTGATTTTTATCCAGCCATTGGTGATATATGTTGTGCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS-3UTR CAA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATATTTTTCCTGTCTCCTTaGGAGCCAACTACTTCTCCG +
Preference number: 5 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIFFLSP*EPTTSP
Trigger: CGGAGAAGTAGTTGGCTCCAAAGGAGACAGGAAAAA...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATACAAGTTTGTGGAAATTaGGCTGAACAGGCCTGCACA +
Preference number: 5 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIQVCGN*AEQACT
Trigger: TGTGCAGGCCTGTTCAGCCAAATTTCCACAAACTTG...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCAAGTCCCCTGGGTGTTaGAATTCGGTAACCGTACCC +
Preference number: 5 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSKSPGC*NSVTVP
Trigger: GGGTACGGTTACCGAATTCAAACACCCAGGGGACTT...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp AGTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCGACATGTGCCTTCTTTaGCTGCACATCAACGTTTTG +
Preference number: 5 (lower is better)
Translates to: SKERLLQLEYPWGFSSISDMCLL*LHINVL
Trigger: CAAAACGTTGATGTGCAGCAAAAGAAGGCACATGTC...GCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp AAAGCAAAGGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTGAAGTCTTCTGGTGTTaGAATGTGGGCAACCACACC +
Preference number: 5 (lower is better)
Translates to: KAKDIMWKRQTTENAGNIEVFWC*NVGNHT
Trigger: GGTGTGGTTGCCCACATTCAAACACCAGAAGACTTC...AATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCCTTTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CAA 90 bp GTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCATCGGCCACTTTGCAGTaGTTGACAAAAGAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: VRKGYYNWNTPGGSVPLASATLQ*LTKEVF
Trigger: GAAGACTTCTTTTGTCAACAACTGCAAAGTGGCCGA...TGCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp GTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCATTCAACCACTCTGGCTaGCAATTTTATCCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: VRKGYYNWNTPGGSVPLAFNHSG*QFYPSN
Trigger: GTTGCTGGGATAAAATTGCAAGCCAGAGTGGTTGAA...TGCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATTCATCACTTGTGTATTaGGCACAGCATGCGTCTCCA +
Preference number: 5 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDSSLVY*AQHASP
Trigger: TGGAGACGCATGCTGTGCCAAATACACAAGTGATGA...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS GCA 90 bp CAGTGGTTTAGTAGCTTTGATACAATCACTGCTCCAATTCCCTTCTaGTGGGATAACATTGGCTACAAAGCACTTTATGGCACAAGGAGG +
Preference number: 5 (lower is better)
Translates to: QWFSSFDTITAPIPF*WDNIGYKALYGTRR
Trigger: CCTCCTTGTGCCATAAAGTGCTTTGTAGCCAATGTTATCCCAGCAGAAGGGAATTGGAGCAGTGATTGTATCAAAGCTACTAAACCACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS CCA 90 bp ACCACTGATCATCCTCTGAGAACTGAGCACAACATATATCACCAATaGCTGGATAAAAATCAGAGCGTGGAGGCAACTGATCACAGTACT +
Preference number: 5 (lower is better)
Translates to: TTDHPLRTEHNIYHQ*LDKNQSVEATDHST
Trigger: AGTACTGTGATCAGTTGCCTCCACGCTCTGATTTTTATCCAGCCATTGGTGATATATGTTGTGCTCAGTTCTCAGAGGATGATCAGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS-3UTR CAA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGCCAACTACTTCTCCGTaGATGCCATTCGGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: PYNRFHSISSILPICLKMPTTSP*MPFGFE
Trigger: TTCAAACCCGAATGGCATCAACGGAGAAGTAGTTGG...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGTTTTTCCTGTCTCCTTaGGAGCCAACTACTTCTCCG +
Preference number: 5 (lower is better)
Translates to: PYNRFHSISSILPICLKMFFLSP*EPTTSP
Trigger: CGGAGAAGTAGTTGGCTCCAAAGGAGACAGGAAAAA...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp GTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCAAATTACTTTCAGCACTaGGTGGTGACACTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: VRKGYYNWNTPGGSVPLANYFQH*VVTLSF
Trigger: GAAACTCAGTGTCACCACCAAGTGCTGAAAGTAATT...TGCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp GTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCAGGACAGTCACTCTTATaGTTTACCTCCACATCCTTT +
Preference number: 5 (lower is better)
Translates to: VRKGYYNWNTPGGSVPLAGQSLL*FTSTSF
Trigger: AAAGGATGTGGAGGTAAACAATAAGAGTGACTGTCC...TGCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAGACATGTGCCTTCTTTaGCTGCACATCAACGTTTTG +
Preference number: 5 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIDMCLL*LHINVL
Trigger: CAAAACGTTGATGTGCAGCAAAAGAAGGCACATGTC...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCGAAGTCTTCTGGTGTTaGAATGTGGGCAACCACACC +
Preference number: 5 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSEVFWC*NVGNHT
Trigger: GGTGTGGTTGCCCACATTCAAACACCAGAAGACTTC...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATATCGGCCACTTTGCAGTaGTTGACAAAAGAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGISATLQ*LTKEVF
Trigger: GAAGACTTCTTTTGTCAACAACTGCAAAGTGGCCGA...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp AGTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCAAGCTTTCGGCCACTTaGCAGTTGTTGACAAAAGAA +
Preference number: 5 (lower is better)
Translates to: SKERLLQLEYPWGFSSISKLSAT*QLLTKE
Trigger: TTCTTTTGTCAACAACTGCAAAGTGGCCGAAAGCTT...GCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAGAACTGTTTTCCAACTaGTCCACCACTTTCACTGTG +
Preference number: 5 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIELFSN*STTFTV
Trigger: CACAGTGAAAGTGGTGGACAAGTTGGAAAACAGTTC...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp AGTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCCACAACATCTACTGTTaGGTCAACACCAAGTTCAAC +
Preference number: 5 (lower is better)
Translates to: SKERLLQLEYPWGFSSISHNIYC*VNTKFN
Trigger: GTTGAACTTGGTGTTGACCAAACAGTAGATGTTGTG...GCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATACACACATCTGGAATCTaGTTATGGCTTCTTCAGACC +
Preference number: 5 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIHTSGI*LWLLQT
Trigger: GGTCTGAAGAAGCCATAACAAGATTCCAGATGTGTG...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATTTCAACCACTCTGGCTaGCAATTTTATCCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDFNHSG*QFYPSN
Trigger: GTTGCTGGGATAAAATTGCAAGCCAGAGTGGTTGAA...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATATTCAACCACTCTGGCTaGCAATTTTATCCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIFNHSG*QFYPSN
Trigger: GTTGCTGGGATAAAATTGCAAGCCAGAGTGGTTGAA...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS TCA 90 bp ATCCACATGCAAGTTTCTCTTAGAGAGAAGGTGAACGTTTGCATTTaGAGGAGTGATGCCTGGAAGCGCTATTTCCAAACTCAGAGAATC +
Preference number: 5 (lower is better)
Translates to: IHMQVSLREKVNVCI*RSDAWKRYFQTQRI
Trigger: GATTCTCTGAGTTTGGAAATAGCGCTTCCAGGCATCACTCCTTCAAATGCAAACGTTCACCTTCTCTCTAAGAGAAACTTGCATGTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS GCA 90 bp CGTCTCCAATTCTTGGTCTATAGGGTGGTCGACTTTTCGGAGCATTaGAGTATTCTAATAATTCAGCTGTCAACATGCACAGCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: RLQFLVYRVVDFSEH*SILIIQLSTCTAFP
Trigger: AGGAAAAGCTGTGCATGTTGACAGCTGAATTATTAGAATACTGCAATGCTCCGAAAAGTCGACCACCCTATAGACCAAGAATTGGAGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS-3UTR CAA 90 bp GTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCACTGACTAGCCAAATATaGTTTGGTTTGCTCACAAAG +
Preference number: 5 (lower is better)
Translates to: VRKGYYNWNTPGGSVPLALTSQI*FGLLTK
Trigger: CTTTGTGAGCAAACCAAACAATATTTGGCTAGTCAG...TGCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAATTACTTTCAGCACTaGGTGGTGACACTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDNYFQH*VVTLSF
Trigger: GAAACTCAGTGTCACCACCAAGTGCTGAAAGTAATT...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp TACAGATTTCTAAGGTTGTGGACACAGCAGGAGAGGGAACATAAAGTTCCTTCTAGACCAGTCTCTTCTTaGACATGCTGTGGAGCAATA +
Preference number: 5 (lower is better)
Translates to: YRFLRLWTQQEREHKVPSRPVSS*TCCGAI
Trigger: TATTGCTCCACAGCATGTCAAAGAAGAGACTGGTCT...AGAAGGAACTTTATGTTCCCTCTCCTGCTGTGTCCACAACCTTAGAAATCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CAA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGAGACCAGTCTCTTCTTaGACATGCTGTGGAGCAATA +
Preference number: 5 (lower is better)
Translates to: PYNRFHSISSILPICLKMRPVSS*TCCGAI
Trigger: TATTGCTCCACAGCATGTCAAAGAAGAGACTGGTCT...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAGGACAGTCACTCTTATaGTTTACCTCCACATCCTTT +
Preference number: 5 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIGQSLL*FTSTSF
Trigger: AAAGGATGTGGAGGTAAACAATAAGAGTGACTGTCC...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp ACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATTAAGTCCCCTGGGTGTTaGAATTCGGTAACCGTACCC +
Preference number: 5 (lower is better)
Translates to: TLCGRGRRQRMQGILQNIKSPGC*NSVTVP
Trigger: GGGTACGGTTACCGAATTCAAACACCCAGGGGACTT...AATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CAA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATACTGCACATCAACGTTTaGTATGATTGCTCTGTTCCA +
Preference number: 5 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGILHINV*YDCSVP
Trigger: TGGAACAGAGCAATCATACAAAACGTTGATGTGCAG...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp AAAGCAAAGGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTGACATGTGCCTTCTTTaGCTGCACATCAACGTTTTG +
Preference number: 5 (lower is better)
Translates to: KAKDIMWKRQTTENAGNIDMCLL*LHINVL
Trigger: CAAAACGTTGATGTGCAGCAAAAGAAGGCACATGTC...AATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCCTTTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CAA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATTCTGCTGGGATAACATaGGCTACAAAGCACTTTATG +
Preference number: 5 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDSAGIT*ATKHFM
Trigger: CATAAAGTGCTTTGTAGCCAATGTTATCCCAGCAGA...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp GTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCAAAAGTTTTCCTGAATTaGGCAGCTCAACTTCTACAG +
Preference number: 5 (lower is better)
Translates to: VRKGYYNWNTPGGSVPLAKVFLN*AAQLLQ
Trigger: CTGTAGAAGTTGAGCTGCCAAATTCAGGAAAACTTT...TGCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp GTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCAGGGATTAGGTCACTTTaGTCTACGACAATGTTGTTT +
Preference number: 5 (lower is better)
Translates to: VRKGYYNWNTPGGSVPLAGIRSL*STTMLF
Trigger: AAACAACATTGTCGTAGACAAAAGTGACCTAATCCC...TGCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAAAGCTTTCGGCCACTTaGCAGTTGTTGACAAAAGAA +
Preference number: 5 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIKLSAT*QLLTKE
Trigger: TTCTTTTGTCAACAACTGCAAAGTGGCCGAAAGCTT...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp CCTTACAATAGGTTTCACTCCATTAGCTCTATCCTGCCAATATGCCTGAAGATGGAACTGTTTTCCAACTaGTCCACCACTTTCACTGTG +
Preference number: 5 (lower is better)
Translates to: PYNRFHSISSILPICLKMELFSN*STTFTV
Trigger: CACAGTGAAAGTGGTGGACAAGTTGGAAAACAGTTC...CATCTTCAGGCATATTGGCAGGATAGAGCTAATGGAGTGAAACCTATTGTAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATCACAACATCTACTGTTaGGTCAACACCAAGTTCAAC +
Preference number: 5 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDHNIYC*VNTKFN
Trigger: GTTGAACTTGGTGTTGACCAAACAGTAGATGTTGTG...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp TACAGATTTCTAAGGTTGTGGACACAGCAGGAGAGGGAACATAAAGTTCCTTCTCACACATCTGGAATCTaGTTATGGCTTCTTCAGACC +
Preference number: 5 (lower is better)
Translates to: YRFLRLWTQQEREHKVPSHTSGI*LWLLQT
Trigger: GGTCTGAAGAAGCCATAACAAGATTCCAGATGTGTG...AGAAGGAACTTTATGTTCCCTCTCCTGCTGTGTCCACAACCTTAGAAATCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CAA 90 bp AGTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCTTTCTGGCATCCCTTTaGGTAGAGCATAAAACAAGT +
Preference number: 5 (lower is better)
Translates to: SKERLLQLEYPWGFSSISFLASL*VEHKTS
Trigger: ACTTGTTTTATGCTCTACCAAAAGGGATGCCAGAAA...GCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp GACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATATGCGTCTCCAATTCTaGGTCTATAGGGTGGTCGAC +
Preference number: 5 (lower is better)
Translates to: DIMWKRQTTENAGNITKYMRLQF*VYRVVD
Trigger: GTCGACCACCCTATAGACCAAGAATTGGAGACGCAT...ATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CAA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCTCATCACTTGTGTATTaGGCACAGCATGCGTCTCCA +
Preference number: 5 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSSSLVY*AQHASP
Trigger: TGGAGACGCATGCTGTGCCAAATACACAAGTGATGA...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp AGTAAGGAAAGGCTATTACAACTGGAATACCCCTGGGGGTTCAGTTCCATTAGCACCAAAAATCATCACTaGTGTATTTGGCACAGCATG +
Preference number: 5 (lower is better)
Translates to: SKERLLQLEYPWGFSSISTKNHH*CIWHSM
Trigger: CATGCTGTGCCAAATACACAAGTGATGATTTTTGGT...GCTAATGGAACTGAACCCCCAGGGGTATTCCAGTTGTAATAGCCTTTCCTTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGGCTAGAGGTGATTGGTaGCACTCTGCAAAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: SVPLAVAKENDQINLQKQARGDW*HSAKRQ
Trigger: CTGCCTCTTTGCAGAGTGCAACCAATCACCTCTAGC...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp GGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATACAGATTTCTAAGGTaGTGGACACAGCAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: GHYVEEADDRECREYYKIYRFLR*WTQQER
Trigger: CCTCTCCTGCTGTGTCCACAACCTTAGAAATCTGTA...TATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS TCA 90 bp TTCAATGTTTCCATAGTCTGCATAGAGCACTTCCACATCAGTGTCTaGTGTCCCCAGAACAACTGCACGATACCAAAAATCATCACTTGT +
Preference number: 5 (lower is better)
Translates to: FNVSIVCIEHFHISV*CPQNNCTIPKIITC
Trigger: ACAAGTGATGATTTTTGGTATCGTGCAGTTGTTCTGGGGACATCAGACACTGATGTGGAAGTGCTCTATGCAGACTATGGAAACATTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS GCA 90 bp ACCACTTCCTCTTCCAAGATGTCGACAATCTTTATGGAGCAGTACTaGTCCATTAACAGTGGTTTAGTAGCTTTGATACAATCACTGCTC +
Preference number: 5 (lower is better)
Translates to: TTSSSKMSTIFMEQY*SINSGLVALIQSLL
Trigger: GAGCAGTGATTGTATCAAAGCTACTAAACCACTGTTAATGGAGCAGTACTGCTCCATAAAGATTGTCGACATCTTGGAAGAGGAAGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS GCA 90 bp AATAAAAACACCAGGTGCTGTACTTTCTCTCCTAAAGCTAGCCTTTaGTGTTTCCTGTCTCATAAGGGTTTACCTCCAAGAGATGCTGTT +
Preference number: 5 (lower is better)
Translates to: NKNTRCCTFSPKASL*CFLSHKGLPPRDAV
Trigger: AACAGCATCTCTTGGAGGTAAACCCTTATGAGACAGGAAACAGCAAAGGCTAGCTTTAGGAGAGAAAGTACAGCACCTGGTGTTTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS CCA 90 bp TGGTTTAGTAGCTTTGATACAATCACTGCTCCAATTCCCTTCTGCTaGGATAACATTGGCTACAAAGCACTTTATGGCACAAGGAGGAAA +
Preference number: 5 (lower is better)
Translates to: WFSSFDTITAPIPFC*DNIGYKALYGTRRK
Trigger: TTTCCTCCTTGTGCCATAAAGTGCTTTGTAGCCAATGTTATCCCAGCAGAAGGGAATTGGAGCAGTGATTGTATCAAAGCTACTAAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS-3UTR CAA 90 bp TACAGATTTCTAAGGTTGTGGACACAGCAGGAGAGGGAACATAAAGTTCCTTCTAATTACTTTCAGCACTaGGTGGTGACACTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: YRFLRLWTQQEREHKVPSNYFQH*VVTLSF
Trigger: GAAACTCAGTGTCACCACCAAGTGCTGAAAGTAATT...AGAAGGAACTTTATGTTCCCTCTCCTGCTGTGTCCACAACCTTAGAAATCTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CAA 90 bp TACAGATTTCTAAGGTTGTGGACACAGCAGGAGAGGGAACATAAAGTTCCTTCTCTGCACATCAACGTTTaGTATGATTGCTCTGTTCCA +
Preference number: 5 (lower is better)
Translates to: YRFLRLWTQQEREHKVPSLHINV*YDCSVP
Trigger: TGGAACAGAGCAATCATACAAAACGTTGATGTGCAG...AGAAGGAACTTTATGTTCCCTCTCCTGCTGTGTCCACAACCTTAGAAATCTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CAA 90 bp AAAGCAAAGGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTTCTGCTGGGATAACATaGGCTACAAAGCACTTTATG +
Preference number: 5 (lower is better)
Translates to: KAKDIMWKRQTTENAGNISAGIT*ATKHFM
Trigger: CATAAAGTGCTTTGTAGCCAATGTTATCCCAGCAGA...AATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCCTTTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CAA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAAGTGGTTTAGTAGCTTaGATACAATCACTGCTCCAA +
Preference number: 5 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGISGLVA*IQSLLQ
Trigger: TTGGAGCAGTGATTGTATCAAAGCTACTAAACCACT...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAAAAGTTTTCCTGAATTaGGCAGCTCAACTTCTACAG +
Preference number: 5 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIKVFLN*AAQLLQ
Trigger: CTGTAGAAGTTGAGCTGCCAAATTCAGGAAAACTTT...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATAGGGATTAGGTCACTTTaGTCTACGACAATGTTGTTT +
Preference number: 5 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIGIRSL*STTMLF
Trigger: AAACAACATTGTCGTAGACAAAAGTGACCTAATCCC...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp TACAGATTTCTAAGGTTGTGGACACAGCAGGAGAGGGAACATAAAGTTCCTTCTCACAACATCTACTGTTaGGTCAACACCAAGTTCAAC +
Preference number: 5 (lower is better)
Translates to: YRFLRLWTQQEREHKVPSHNIYC*VNTKFN
Trigger: GTTGAACTTGGTGTTGACCAAACAGTAGATGTTGTG...AGAAGGAACTTTATGTTCCCTCTCCTGCTGTGTCCACAACCTTAGAAATCTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CAA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCCACACATCTGGAATCTaGTTATGGCTTCTTCAGACC +
Preference number: 5 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSHTSGI*LWLLQT
Trigger: GGTCTGAAGAAGCCATAACAAGATTCCAGATGTGTG...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATTTTCTGGCATCCCTTTaGGTAGAGCATAAAACAAGT +
Preference number: 5 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDFLASL*VEHKTS
Trigger: ACTTGTTTTATGCTCTACCAAAAGGGATGCCAGAAA...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGATGCGTCTCCAATTCTaGGTCTATAGGGTGGTCGAC +
Preference number: 5 (lower is better)
Translates to: SVPLAVAKENDQINLQKQMRLQF*VYRVVD
Trigger: GTCGACCACCCTATAGACCAAGAATTGGAGACGCAT...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTTCATCACTTGTGTATTaGGCACAGCATGCGTCTCCA +
Preference number: 5 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSSSLVY*AQHASP
Trigger: TGGAGACGCATGCTGTGCCAAATACACAAGTGATGA...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS GCA 90 bp CAACAAGGTTGTCCTATCTCTGCCTTGAAACCATTAGGTAACTTCTaGTGGCAGTGTTCTGCTAATGACTTGTTCAAATCATTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: QQGCPISALKPLGNF*WQCSANDLFKSLSF
Trigger: GAAACTCAATGATTTGAACAAGTCATTAGCAGAACACTGCCAGCAGAAGTTACCTAATGGTTTCAAGGCAGAGATAGGACAACCTTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS CCA 90 bp AATTCTCCAGGACTATATATCACACAGACCACAACATCTACTGTTTaGTCAACACCAAGTTCAACCCATGTCCACTCCAATGGATTTACT +
Preference number: 5 (lower is better)
Translates to: NSPGLYITQTTTSTV*STPSSTHVHSNGFT
Trigger: AGTAAATCCATTGGAGTGGACATGGGTTGAACTTGGTGTTGACCAAACAGTAGATGTTGTGGTCTGTGTGATATATAGTCCTGGAGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS CCA 90 bp ACTTCAACCACTCTGGCTTGCAATTTTATCCCAGCAACACACATCTaGAATCTTGTTATGGCTTCTTCAGACCAATGTTTGTTTCTAGAC +
Preference number: 5 (lower is better)
Translates to: TSTTLACNFIPATHI*NLVMASSDQCLFLD
Trigger: GTCTAGAAACAAACATTGGTCTGAAGAAGCCATAACAAGATTCCAGATGTGTGTTGCTGGGATAAAATTGCAAGCCAGAGTGGTTGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS-3UTR CAA 90 bp TACAGATTTCTAAGGTTGTGGACACAGCAGGAGAGGGAACATAAAGTTCCTTCTCTGACTAGCCAAATATaGTTTGGTTTGCTCACAAAG +
Preference number: 5 (lower is better)
Translates to: YRFLRLWTQQEREHKVPSLTSQI*FGLLTK
Trigger: CTTTGTGAGCAAACCAAACAATATTTGGCTAGTCAG...AGAAGGAACTTTATGTTCCCTCTCCTGCTGTGTCCACAACCTTAGAAATCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CAA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTAGACCAGTCTCTTCTTaGACATGCTGTGGAGCAATA +
Preference number: 5 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSRPVSS*TCCGAI
Trigger: TATTGCTCCACAGCATGTCAAAGAAGAGACTGGTCT...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGCAAGTTTGTGGAAATTaGGCTGAACAGGCCTGCACA +
Preference number: 5 (lower is better)
Translates to: SVPLAVAKENDQINLQKQQVCGN*AEQACT
Trigger: TGTGCAGGCCTGTTCAGCCAAATTTCCACAAACTTG...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCCTGCACATCAACGTTTaGTATGATTGCTCTGTTCCA +
Preference number: 5 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSLHINV*YDCSVP
Trigger: TGGAACAGAGCAATCATACAAAACGTTGATGTGCAG...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCTCTGCTGGGATAACATaGGCTACAAAGCACTTTATG +
Preference number: 5 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSSAGIT*ATKHFM
Trigger: CATAAAGTGCTTTGTAGCCAATGTTATCCCAGCAGA...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp TACAGATTTCTAAGGTTGTGGACACAGCAGGAGAGGGAACATAAAGTTCCTTCTAGTGGTTTAGTAGCTTaGATACAATCACTGCTCCAA +
Preference number: 5 (lower is better)
Translates to: YRFLRLWTQQEREHKVPSSGLVA*IQSLLQ
Trigger: TTGGAGCAGTGATTGTATCAAAGCTACTAAACCACT...AGAAGGAACTTTATGTTCCCTCTCCTGCTGTGTCCACAACCTTAGAAATCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CAA 90 bp TACAGATTTCTAAGGTTGTGGACACAGCAGGAGAGGGAACATAAAGTTCCTTCTGGGATTAGGTCACTTTaGTCTACGACAATGTTGTTT +
Preference number: 5 (lower is better)
Translates to: YRFLRLWTQQEREHKVPSGIRSL*STTMLF
Trigger: AAACAACATTGTCGTAGACAAAAGTGACCTAATCCC...AGAAGGAACTTTATGTTCCCTCTCCTGCTGTGTCCACAACCTTAGAAATCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CAA 90 bp AATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATTTTGGTAAGATTTCCTaGACTAAAGCACGATACCAA +
Preference number: 5 (lower is better)
Translates to: NKNHQPNRRMAGRQKRRDFGKIS*TKARYQ
Trigger: TTGGTATCGTGCTTTAGTCAAGGAAATCTTACCAAA...ATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATATTTGGTAAGATTTCCTaGACTAAAGCACGATACCAA +
Preference number: 5 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIFGKIS*TKARYQ
Trigger: TTGGTATCGTGCTTTAGTCAAGGAAATCTTACCAAA...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATATCCCTGTACATGAACTaGAAGCTCATGTTTATTAAC +
Preference number: 5 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGISLYMN*KLMFIN
Trigger: GTTAATAAACATGAGCTTCAAGTTCATGTACAGGGA...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp AAAGCAAAGGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTTTTCTGGCATCCCTTTaGGTAGAGCATAAAACAAGT +
Preference number: 5 (lower is better)
Translates to: KAKDIMWKRQTTENAGNIFLASL*VEHKTS
Trigger: ACTTGTTTTATGCTCTACCAAAAGGGATGCCAGAAA...AATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCCTTTGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CAA 90 bp ATAAAAACCACCAACCTAATAGGAGAATGGCAGGCAGGCAAAAACGGAGGGATACGACTTTTCGGAGCATaGCAGTATTCTAATAATTCA +
Preference number: 5 (lower is better)
Translates to: IKTTNLIGEWQAGKNGGIRLFGA*QYSNNS
Trigger: TGAATTATTAGAATACTGCAATGCTCCGAAAAGTCG...TATCCCTCCGTTTTTGCCTGCCTGCCATTCTCCTATTAGGTTGGTGGTTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS TCA 90 bp AAATGGCTCTGTCATCTTACAAGGAGGTGCTTCCAAATTATTTCTTaGCATCACATTAAATGGCGATTTAACACTCATCGAGGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: KWLCHLTRRCFQIIS*HHIKWRFNTHRGLE
Trigger: TTCCAGGCCTCGATGAGTGTTAAATCGCCATTTAATGTGATGTCAAGAAATAATTTGGAAGCACCTCCTTGTAAGATGACAGAGCCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS TCA 90 bp AAATGGCTCTGTCATCTTACAAGGAGGTGCTTCCAAATTATTTCTTaGCATCACATTAAATGGCGATTTAACACTCATCGAGGCCAAACC +
Preference number: 5 (lower is better)
Translates to: KWLCHLTRRCFQIIS*HHIKWRFNTHRGQT
Trigger: GGTTTGGCCTCGATGAGTGTTAAATCGCCATTTAATGTGATGTCAAGAAATAATTTGGAAGCACCTCCTTGTAAGATGACAGAGCCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS CCA 90 bp CAAGGTTGTCCTATCTCTGCCTTGAAACCATTAGGTAACTTCTGCTaGCAGTGTTCTGCTAATGACTTGTTCAAATCATTGAGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: QGCPISALKPLGNFC*QCSANDLFKSLSFF
Trigger: AAAGAAACTCAATGATTTGAACAAGTCATTAGCAGAACACTGCCAGCAGAAGTTACCTAATGGTTTCAAGGCAGAGATAGGACAACCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS-3UTR CAA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTGGACAGTCACTCTTATaGTTTACCTCCACATCCTTT +
Preference number: 5 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSGQSLL*FTSTSF
Trigger: AAAGGATGTGGAGGTAAACAATAAGAGTGACTGTCC...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCAGTGGTTTAGTAGCTTaGATACAATCACTGCTCCAA +
Preference number: 5 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSSGLVA*IQSLLQ
Trigger: TTGGAGCAGTGATTGTATCAAAGCTACTAAACCACT...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp GACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATAAGCTTTCGGCCACTTaGCAGTTGTTGACAAAAGAA +
Preference number: 5 (lower is better)
Translates to: DIMWKRQTTENAGNITKYKLSAT*QLLTKE
Trigger: TTCTTTTGTCAACAACTGCAAAGTGGCCGAAAGCTT...ATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CAA 90 bp ACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATTGAACTGTTTTCCAACTaGTCCACCACTTTCACTGTG +
Preference number: 5 (lower is better)
Translates to: TLCGRGRRQRMQGILQNIELFSN*STTFTV
Trigger: CACAGTGAAAGTGGTGGACAAGTTGGAAAACAGTTC...AATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CAA 90 bp GGACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATAGTCCCTATGTATTCCTaGCCAGTATTCTCATTGATT +
Preference number: 5 (lower is better)
Translates to: GHYVEEADDRECREYYKIVPMYS*PVFSLI
Trigger: AATCAATGAGAATACTGGCAAGGAATACATAGGGAC...TATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CAA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTCTGACTAGCCAAATATaGTTTGGTTTGCTCACAAAG +
Preference number: 5 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSLTSQI*FGLLTK
Trigger: CTTTGTGAGCAAACCAAACAATATTTGGCTAGTCAG...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTAAAGTTTTCCTGAATTaGGCAGCTCAACTTCTACAG +
Preference number: 5 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSKVFLN*AAQLLQ
Trigger: CTGTAGAAGTTGAGCTGCCAAATTCAGGAAAACTTT...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp AACAGCAGAAGCATTATGACCAAACCTCAGGTCATTAAATCACGAAAGTACAGCCGACTTTTCGGAGCATaGCAGTATTCTAATAATTCA +
Preference number: 5 (lower is better)
Translates to: NSRSIMTKPQVIKSRKYSRLFGA*QYSNNS
Trigger: TGAATTATTAGAATACTGCAATGCTCCGAAAAGTCG...GCTGTACTTTCGTGATTTAATGACCTGAGGTTTGGTCATAATGCTTCTGCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp AAAAACGGAGGGATAGAAGGTCATTACAGAGAAAGTGGACAAAGAAAAGGTTCTACCAAAAATCATCACTaGTGTATTTGGCACAGCATG +
Preference number: 5 (lower is better)
Translates to: KNGGIEGHYRESGQRKGSTKNHH*CIWHSM
Trigger: CATGCTGTGCCAAATACACAAGTGATGATTTTTGGT...AGAACCTTTTCTTTGTCCACTTTCTCTGTAATGACCTTCTATCCCTCCGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS-3UTR CAA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGTTTGGTAAGATTTCCTaGACTAAAGCACGATACCAA +
Preference number: 5 (lower is better)
Translates to: SVPLAVAKENDQINLQKQFGKIS*TKARYQ
Trigger: TTGGTATCGTGCTTTAGTCAAGGAAATCTTACCAAA...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS-3UTR CAA 90 bp ACATTATGTGGAAGAGGCAGACGACAGAGAATGCAGGGAATATTACAAAATATTTCCCTGTACATGAACTaGAAGCTCATGTTTATTAAC +
Preference number: 5 (lower is better)
Translates to: TLCGRGRRQRMQGILQNISLYMN*KLMFIN
Trigger: GTTAATAAACATGAGCTTCAAGTTCATGTACAGGGA...AATATTTTGTAATATTCCCTGCATTCTCTGTCGTCTGCCTCTTCCACATAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251864.6
CDS-3UTR CAA 90 bp TCAGTTCCATTAGCAGTAGCAAAGGAAAACGATCAGATAAACCTACAAAAACAGTCCCTGTACATGAACTaGAAGCTCATGTTTATTAAC +
Preference number: 5 (lower is better)
Translates to: SVPLAVAKENDQINLQKQSLYMN*KLMFIN
Trigger: GTTAATAAACATGAGCTTCAAGTTCATGTACAGGGA...CTGTTTTTGTAGGTTTATCTGATCGTTTTCCTTTGCTACTGCTAATGGAACTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS GCA 72 bp GCCGATGCTGGGAGCCCTGCCGCCTGGGATGCGCCCTaGACTTCCCTCGCCTCCAATCCCCAGTGCGCCCTC +
Preference number: 6 (lower is better)
Translates to: ADAGSPAAWDAP*TSLASNPQCAL
Trigger: GAGGGCGCACTGGGGATTGGAGGCGAGGGAAGTGCAGGGCGCATCCCAGGCGGCAGGGCTCCCAGCATCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS GCA 72 bp TCTGGCGGTGATGGCGACTGCCGATGCTGGGAGCCCTaGCGCCTGGGATGCGCCCTGCACTTCCCTCGCCTC +
Preference number: 6 (lower is better)
Translates to: SGGDGDCRCWEP*RLGCALHFPRL
Trigger: GAGGCGAGGGAAGTGCAGGGCGCATCCCAGGCGGCAGGGCTCCCAGCATCGGCAGTCGCCATCACCGCCAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS GCA 72 bp CTGTCTCTGCGGTCTGGCGGTGATGGCGACTGCCGATaGTGGGAGCCCTGCCGCCTGGGATGCGCCCTGCAC +
Preference number: 6 (lower is better)
Translates to: LSLRSGGDGDCR*WEPCRLGCALH
Trigger: GTGCAGGGCGCATCCCAGGCGGCAGGGCTCCCAGCATCGGCAGTCGCCATCACCGCCAGACCGCAGAGACAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS GCA 72 bp CCGAACCTGTCTCTGCGGTCTGGCGGTGATGGCGACTaGCGATGCTGGGAGCCCTGCCGCCTGGGATGCGCC +
Preference number: 6 (lower is better)
Translates to: PNLSLRSGGDGD*RCWEPCRLGCA
Trigger: GGCGCATCCCAGGCGGCAGGGCTCCCAGCATCGGCAGTCGCCATCACCGCCAGACCGCAGAGACAGGTTCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS TCA 72 bp GACCGCGGATCCGAACCTGTCTCTGCGGTCTGGCGGTaGTGGCGACTGCCGATGCTGGGAGCCCTGCCGCCT +
Preference number: 6 (lower is better)
Translates to: DRGSEPVSAVWR*WRLPMLGALPP
Trigger: AGGCGGCAGGGCTCCCAGCATCGGCAGTCGCCATCACCGCCAGACCGCAGAGACAGGTTCGGATCCGCGGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS CCA 72 bp GTGATGGCGACTGCCGATGCTGGGAGCCCTGCCGCCTaGGATGCGCCCTGCACTTCCCTCGCCTCCAATCCC +
Preference number: 6 (lower is better)
Translates to: VMATADAGSPAA*DAPCTSLASNP
Trigger: GGGATTGGAGGCGAGGGAAGTGCAGGGCGCATCCCAGGCGGCAGGGCTCCCAGCATCGGCAGTCGCCATCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS CCA 72 bp TCTCTGCGGTCTGGCGGTGATGGCGACTGCCGATGCTaGGAGCCCTGCCGCCTGGGATGCGCCCTGCACTTC +
Preference number: 6 (lower is better)
Translates to: SLRSGGDGDCRC*EPCRLGCALHF
Trigger: GAAGTGCAGGGCGCATCCCAGGCGGCAGGGCTCCCAGCATCGGCAGTCGCCATCACCGCCAGACCGCAGAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS GCA 72 bp AAAGAGGCAAGAGGACCGCGGATCCGAACCTGTCTCTaGGGTCTGGCGGTGATGGCGACTGCCGATGCTGGG +
Preference number: 6 (lower is better)
Translates to: KEARGPRIRTCL*GLAVMATADAG
Trigger: CCCAGCATCGGCAGTCGCCATCACCGCCAGACCGCAGAGACAGGTTCGGATCCGCGGTCCTCTTGCCTCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS CAA 90 bp CTGAACAGGCCTGCACACGATGCTGTGTGCAGACCAGTCTCTTCTTaGACATGCTGTGGAGCAATAGTAGGTCTGCTTGCACTGAGAGCA +
Preference number: 6 (lower is better)
Translates to: LNRPAHDAVCRPVSS*TCCGAIVGLLALRA
Trigger: TGCTCTCAGTGCAAGCAGACCTACTATTGCTCCACAGCATGTCAAAGAAGAGACTGGTCTGCACACAGCATCGTGTGCAGGCCTGTTCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS CAA 72 bp CCTGCACACGATGCTGTGTGCAGACCAGTCTCTTCTTaGACATGCTGTGGAGCAATAGTAGGTCTGCTTGCA +
Preference number: 6 (lower is better)
Translates to: PAHDAVCRPVSS*TCCGAIVGLLA
Trigger: TGCAAGCAGACCTACTATTGCTCCACAGCATGTCAAAGAAGAGACTGGTCTGCACACAGCATCGTGTGCAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS TCA 72 bp GGCAAGTTGTGGACCGAAGAGGAGGTCCTAAGGAGGTaGAGAGCCCTGGATTACTTATGGACAAGGAATTCT +
Preference number: 6 (lower is better)
Translates to: GKLWTEEEVLRR*RALDYLWTRNS
Trigger: AGAATTCCTTGTCCATAAGTAATCCAGGGCTCTTCACCTCCTTAGGACCTCCTCTTCGGTCCACAACTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS GCA 72 bp TTCTTTGACATGCTGTGGAGCAATAGTAGGTCTGCTTaGACTGAGAGCACCTCAGCGATCCAAATAGGCCAC +
Preference number: 6 (lower is better)
Translates to: FFDMLWSNSRSA*TESTSAIQIGH
Trigger: GTGGCCTATTTGGATCGCTGAGGTGCTCTCAGTGCAAGCAGACCTACTATTGCTCCACAGCATGTCAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS GCA 72 bp CACGATGCTGTGTGCAGACCAGTCTCTTCTTTGACATaGTGTGGAGCAATAGTAGGTCTGCTTGCACTGAGA +
Preference number: 6 (lower is better)
Translates to: HDAVCRPVSSLT*CGAIVGLLALR
Trigger: TCTCAGTGCAAGCAGACCTACTATTGCTCCACAGCATGTCAAAGAAGAGACTGGTCTGCACACAGCATCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS GCA 72 bp GTTTGTGGAAATTTGGCTGAACAGGCCTGCACACGATaGTGTGTGCAGACCAGTCTCTTCTTTGACATGCTG +
Preference number: 6 (lower is better)
Translates to: VCGNLAEQACTR*CVQTSLFFDML
Trigger: CAGCATGTCAAAGAAGAGACTGGTCTGCACACAGCATCGTGTGCAGGCCTGTTCAGCCAAATTTCCACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS CAA 72 bp CACTTGTGTATTTGGCACAGCATGCGTCTCCAATTCTaGGTCTATAGGGTGGTCGACTTTTCGGAGCATTGC +
Preference number: 6 (lower is better)
Translates to: HLCIWHSMRLQF*VYRVVDFSEHC
Trigger: GCAATGCTCCGAAAAGTCGACCACCCTATAGACCAAGAATTGGAGACGCATGCTGTGCCAAATACACAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS TCA 72 bp AAGCCTGCATCTAGGAGAACTTTGCTAACACTGACATaGGGCGTCTCGGATTTATCAATAAGCTCCACCAGG +
Preference number: 6 (lower is better)
Translates to: KPASRRTLLTLT*GVSDLSISSTR
Trigger: CCTGGTGGAGCTTATTGATAAATCCGAGACGCCTCATGTCAGTGTTAGCAAAGTTCTCCTAGATGCAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS CCA 72 bp ACTTGTGTATTTGGCACAGCATGCGTCTCCAATTCTTaGTCTATAGGGTGGTCGACTTTTCGGAGCATTGCA +
Preference number: 6 (lower is better)
Translates to: TCVFGTACVSNS*SIGWSTFRSIA
Trigger: TGCAATGCTCCGAAAAGTCGACCACCCTATAGACCAAGAATTGGAGACGCATGCTGTGCCAAATACACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS GCA 72 bp ACCAGGTGCTGTACTTTCTCTCCTAAAGCTAGCCTTTaGTGTTTCCTGTCTCATAAGGGTTTACCTCCAAGA +
Preference number: 6 (lower is better)
Translates to: TRCCTFSPKASL*CFLSHKGLPPR
Trigger: TCTTGGAGGTAAACCCTTATGAGACAGGAAACAGCAAAGGCTAGCTTTAGGAGAGAAAGTACAGCACCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251864.6
ENST00000369282.5
CDS GCA 72 bp AACAAACTAGCGCCAGCTGACCCACATCTAAGTAAATaGCCTAGCACATCTTCCTTTCCTATAGGAGGAAAG +
Preference number: 6 (lower is better)
Translates to: NKLAPADPHLSK*PSTSSFPIGGK
Trigger: CTTTCCTCCTATAGGAAAGGAAGATGTGCTAGGGCATTTACTTAGATGTGGGTCAGCTGGCGCTAGTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS CAA 72 bp CAATCACTGCTCCAATTCCCTTCTGCTGGGATAACATaGGCTACAAAGCACTTTATGGCACAAGGAGGAAAC +
Preference number: 6 (lower is better)
Translates to: QSLLQFPSAGIT*ATKHFMAQGGN
Trigger: GTTTCCTCCTTGTGCCATAAAGTGCTTTGTAGCCAATGTTATCCCAGCAGAAGGGAATTGGAGCAGTGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS CAA 72 bp GAGCAGTACTGCTCCATTAACAGTGGTTTAGTAGCTTaGATACAATCACTGCTCCAATTCCCTTCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: EQYCSINSGLVA*IQSLLQFPSAG
Trigger: CCCAGCAGAAGGGAATTGGAGCAGTGATTGTATCAAAGCTACTAAACCACTGTTAATGGAGCAGTACTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS TCA 72 bp ACTGAATCCACATGCAAGTTTCTCTTAGAGAGAAGGTaGACGTTTGCATTTGAAGGAGTGATGCCTGGAAGC +
Preference number: 6 (lower is better)
Translates to: TESTCKFLLERR*TFAFEGVMPGS
Trigger: GCTTCCAGGCATCACTCCTTCAAATGCAAACGTTCACCTTCTCTCTAAGAGAAACTTGCATGTGGATTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS CAA 90 bp GCTTTGATACAATCACTGCTCCAATTCCCTTCTGCTGGGATAACATaGGCTACAAAGCACTTTATGGCACAAGGAGGAAACAAGTCAATG +
Preference number: 6 (lower is better)
Translates to: ALIQSLLQFPSAGIT*ATKHFMAQGGNKSM
Trigger: CATTGACTTGTTTCCTCCTTGTGCCATAAAGTGCTTTGTAGCCAATGTTATCCCAGCAGAAGGGAATTGGAGCAGTGATTGTATCAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS CAA 90 bp CTTTCGGCCACTTTGCAGTTGTTGACAAAAGAAGTCTTCTGGTGTTaGAATGTGGGCAACCACACCACAAAACTCATCACCTACATTCAA +
Preference number: 6 (lower is better)
Translates to: LSATLQLLTKEVFWC*NVGNHTTKLITYIQ
Trigger: TTGAATGTAGGTGATGAGTTTTGTGGTGTGGTTGCCCACATTCAAACACCAGAAGACTTCTTTTGTCAACAACTGCAAAGTGGCCGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS TCA 72 bp TTTTCCTGTCTCCTTTGGAGCCAACTACTTCTCCGTTaGTGCCATTCGGGTTTGAAGAAACTGAATTGTCTT +
Preference number: 6 (lower is better)
Translates to: FSCLLWSQLLLR*CHSGLKKLNCL
Trigger: AAGACAATTCAGTTTCTTCAAACCCGAATGGCATCAACGGAGAAGTAGTTGGCTCCAAAGGAGACAGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS TCA 72 bp CAAGTTTCTCTTAGAGAGAAGGTGAACGTTTGCATTTaGAGGAGTGATGCCTGGAAGCGCTATTTCCAAACT +
Preference number: 6 (lower is better)
Translates to: QVSLREKVNVCI*RSDAWKRYFQT
Trigger: AGTTTGGAAATAGCGCTTCCAGGCATCACTCCTTCAAATGCAAACGTTCACCTTCTCTCTAAGAGAAACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369280.1
CDS GCA 72 bp AGTAGCTTTGATACAATCACTGCTCCAATTCCCTTCTaGTGGGATAACATTGGCTACAAAGCACTTTATGGC +
Preference number: 6 (lower is better)
Translates to: SSFDTITAPIPF*WDNIGYKALYG
Trigger: GCCATAAAGTGCTTTGTAGCCAATGTTATCCCAGCAGAAGGGAATTGGAGCAGTGATTGTATCAAAGCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS GCA 72 bp CCTATCCCATTTTCAGTGACTTCAACCACTCTGGCTTaGAATTTTATCCCAGCAACACACATCTGGAATCTT +
Preference number: 6 (lower is better)
Translates to: PIPFSVTSTTLA*NFIPATHIWNL
Trigger: AAGATTCCAGATGTGTGTTGCTGGGATAAAATTGCAAGCCAGAGTGGTTGAAGTCACTGAAAATGGGATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS GCA 72 bp ATACCAAAAATCATCACTTGTGTATTTGGCACAGCATaGGTCTCCAATTCTTGGTCTATAGGGTGGTCGACT +
Preference number: 6 (lower is better)
Translates to: IPKIITCVFGTA*VSNSWSIGWST
Trigger: AGTCGACCACCCTATAGACCAAGAATTGGAGACGCATGCTGTGCCAAATACACAAGTGATGATTTTTGGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS CCA 72 bp AGCTTTGATACAATCACTGCTCCAATTCCCTTCTGCTaGGATAACATTGGCTACAAAGCACTTTATGGCACA +
Preference number: 6 (lower is better)
Translates to: SFDTITAPIPFC*DNIGYKALYGT
Trigger: TGTGCCATAAAGTGCTTTGTAGCCAATGTTATCCCAGCAGAAGGGAATTGGAGCAGTGATTGTATCAAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS CAA 72 bp TTTTTCCTGTCTCCTTTGGAGCCAACTACTTCTCCGTaGATGCCATTCGGGTTTGAAGAAACTGAATTGTCT +
Preference number: 6 (lower is better)
Translates to: FFLSPLEPTTSP*MPFGFEETELS
Trigger: AGACAATTCAGTTTCTTCAAACCCGAATGGCATCAACGGAGAAGTAGTTGGCTCCAAAGGAGACAGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS CAA 72 bp AGGACTATATATCACACAGACCACAACATCTACTGTTaGGTCAACACCAAGTTCAACCCATGTCCACTCCAA +
Preference number: 6 (lower is better)
Translates to: RTIYHTDHNIYC*VNTKFNPCPLQ
Trigger: TTGGAGTGGACATGGGTTGAACTTGGTGTTGACCAAACAGTAGATGTTGTGGTCTGTGTGATATATAGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS CAA 72 bp TCCTATCCCATTTTCAGTGACTTCAACCACTCTGGCTaGCAATTTTATCCCAGCAACACACATCTGGAATCT +
Preference number: 6 (lower is better)
Translates to: SYPIFSDFNHSG*QFYPSNTHLES
Trigger: AGATTCCAGATGTGTGTTGCTGGGATAAAATTGCAAGCCAGAGTGGTTGAAGTCACTGAAAATGGGATAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS CAA 90 bp AAAAATCATCACTTGTGTATTTGGCACAGCATGCGTCTCCAATTCTaGGTCTATAGGGTGGTCGACTTTTCGGAGCATTGCAGTATTCTA +
Preference number: 6 (lower is better)
Translates to: KNHHLCIWHSMRLQF*VYRVVDFSEHCSIL
Trigger: TAGAATACTGCAATGCTCCGAAAAGTCGACCACCCTATAGACCAAGAATTGGAGACGCATGCTGTGCCAAATACACAAGTGATGATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS GCA 72 bp TGTCCTATCTCTGCCTTGAAACCATTAGGTAACTTCTaGTGGCAGTGTTCTGCTAATGACTTGTTCAAATCA +
Preference number: 6 (lower is better)
Translates to: CPISALKPLGNF*WQCSANDLFKS
Trigger: TGATTTGAACAAGTCATTAGCAGAACACTGCCAGCAGAAGTTACCTAATGGTTTCAAGGCAGAGATAGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS GCA 72 bp TTCTTGGTCTATAGGGTGGTCGACTTTTCGGAGCATTaGAGTATTCTAATAATTCAGCTGTCAACATGCACA +
Preference number: 6 (lower is better)
Translates to: FLVYRVVDFSEH*SILIIQLSTCT
Trigger: TGTGCATGTTGACAGCTGAATTATTAGAATACTGCAATGCTCCGAAAAGTCGACCACCCTATAGACCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS CCA 72 bp ACTCTGGCTTGCAATTTTATCCCAGCAACACACATCTaGAATCTTGTTATGGCTTCTTCAGACCAATGTTTG +
Preference number: 6 (lower is better)
Translates to: TLACNFIPATHI*NLVMASSDQCL
Trigger: CAAACATTGGTCTGAAGAAGCCATAACAAGATTCCAGATGTGTGTTGCTGGGATAAAATTGCAAGCCAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS CAA 72 bp TATTCACTTCTTTGGGTGGTGAATTACTTTCAGCACTaGGTGGTGACACTGAGTTTCCTGCTGGCAATTTTT +
Preference number: 6 (lower is better)
Translates to: YSLLWVVNYFQH*VVTLSFLLAIF
Trigger: AAAAATTGCCAGCAGGAAACTCAGTGTCACCACCAAGTGCTGAAAGTAATTCACCACCCAAAGAAGTGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS CAA 90 bp ATCTTTATGGAGCAGTACTGCTCCATTAACAGTGGTTTAGTAGCTTaGATACAATCACTGCTCCAATTCCCTTCTGCTGGGATAACATTG +
Preference number: 6 (lower is better)
Translates to: IFMEQYCSINSGLVA*IQSLLQFPSAGITL
Trigger: CAATGTTATCCCAGCAGAAGGGAATTGGAGCAGTGATTGTATCAAAGCTACTAAACCACTGTTAATGGAGCAGTACTGCTCCATAAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS CAA 90 bp AAATTCTCCAGGACTATATATCACACAGACCACAACATCTACTGTTaGGTCAACACCAAGTTCAACCCATGTCCACTCCAATGGATTTAC +
Preference number: 6 (lower is better)
Translates to: KFSRTIYHTDHNIYC*VNTKFNPCPLQWIY
Trigger: GTAAATCCATTGGAGTGGACATGGGTTGAACTTGGTGTTGACCAAACAGTAGATGTTGTGGTCTGTGTGATATATAGTCCTGGAGAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS CAA 72 bp ATCTGGAATCTTGTTATGGCTTCTTCAGACCAATGTTaGTTTCTAGACTGTATATCTGCTAACTGGCACCGT +
Preference number: 6 (lower is better)
Translates to: IWNLVMASSDQC*FLDCISANWHR
Trigger: ACGGTGCCAGTTAGCAGATATACAGTCTAGAAACAAACATTGGTCTGAAGAAGCCATAACAAGATTCCAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS CAA 72 bp TTATCAATAAGCTCCACCAGGGAACTGTTTTCCAACTaGTCCACCACTTTCACTGTGATTATTTTGTTCTGT +
Preference number: 6 (lower is better)
Translates to: LSISSTRELFSN*STTFTVIILFC
Trigger: ACAGAACAAAATAATCACAGTGAAAGTGGTGGACAAGTTGGAAAACAGTTCCCTGGTGGAGCTTATTGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS CAA 72 bp TGCTGGCAGTGTTCTGCTAATGACTTGTTCAAATCATaGAGTTTCTTTAAAGCATCCTCTTTAAGCACATGG +
Preference number: 6 (lower is better)
Translates to: CWQCSANDLFKS*SFFKASSLSTW
Trigger: CCATGTGCTTAAAGAGGATGCTTTAAAGAAACTCAATGATTTGAACAAGTCATTAGCAGAACACTGCCAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS CAA 72 bp AAATGTACTTTAACATGTCCATTTGGTAAGATTTCCTaGACTAAAGCACGATACCAACTACCATCACCTGCA +
Preference number: 6 (lower is better)
Translates to: KCTLTCPFGKIS*TKARYQLPSPA
Trigger: TGCAGGTGATGGTAGTTGGTATCGTGCTTTAGTCAAGGAAATCTTACCAAATGGACATGTTAAAGTACATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS CAA 90 bp TTGAAACCATTAGGTAACTTCTGCTGGCAGTGTTCTGCTAATGACTaGTTCAAATCATTGAGTTTCTTTAAAGCATCCTCTTTAAGCACA +
Preference number: 6 (lower is better)
Translates to: LKPLGNFCWQCSAND*FKSLSFFKASSLST
Trigger: TGTGCTTAAAGAGGATGCTTTAAAGAAACTCAATGATTTGAACAAGTCATTAGCAGAACACTGCCAGCAGAAGTTACCTAATGGTTTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5
CDS TCA 72 bp TGTCATCTTACAAGGAGGTGCTTCCAAATTATTTCTTaGCATCACATTAAATGGCGATTTAACACTCATCGA +
Preference number: 6 (lower is better)
Translates to: CHLTRRCFQIIS*HHIKWRFNTHR
Trigger: TCGATGAGTGTTAAATCGCCATTTAATGTGATGTCAAGAAATAATTTGGAAGCACCTCCTTGTAAGATGACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251864.6
ENST00000369280.1
ENST00000369282.5