Pregenerated sensors for TDP2 (Homo sapiens)
Ensembl gene IDs: ENSG00000111802Ensembl transcript IDs: ENST00000341060.3, ENST00000378198.9, ENST00000478285.1, ENST00000478507.1, ENST00000480495.1
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTAGTACATTATTTCCTCCACAGCAAACCTACCTTTCCAGAAGGTaGAAATTGTATTTGCAACAATCAGGGCAAAACCCACACTTGAAA | + |
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Preference number: 1 (lower is better) Translates to: SSTLFPPQQTYLSRR*KLYLQQSGQNPHLK Trigger: TTTCAAGTGTGGGTTTTGCCCTGATTGTTGCAAATACAATTTCCACCTTCTGGAAAGGTAGGTTTGCTGTGGAGGAAATAATGTACTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| 3UTR CAA 90 bp | ACATTATTTCCTCCACAGCAAACCTACCTTTCCAGAAGGTGGAAATaGTATTTGCAACAATCAGGGCAAAACCCACACTTGAAAAGCATT | + |
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Preference number: 2 (lower is better) Translates to: TLFPPQQTYLSRRWK*YLQQSGQNPHLKSI Trigger: AATGCTTTTCAAGTGTGGGTTTTGCCCTGATTGTTGCAAATACAATTTCCACCTTCTGGAAAGGTAGGTTTGCTGTGGAGGAAATAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| 3UTR-3UTR GCA 90 bp | GAAAACTCTGACAGGCTTTGTGCCCTTTTTATTAAATGGCCTCACATCCTGAATGGTGGAAATTGTATTTaGAACAATCAGGGCAAAACC | + |
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Preference number: 2 (lower is better) Translates to: ENSDRLCALFIKWPHILNGGNCI*NNQGKT Trigger: GGTTTTGCCCTGATTGTTGCAAATACAATTTCCACC...ATTCAGGATGTGAGGCCATTTAATAAAAAGGGCACAAAGCCTGTCAGAGTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| 3UTR-3UTR TCA 90 bp | TTAACCATCATCAAGCTTAACTTTGCCTCTGTTGACAACATGACTACAAACATGGATGATCTGAACTTATaGAATAAAGGATCCAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: LTIIKLNFASVDNMTTNMDDLNL*NKGSSP Trigger: GGGACTGGATCCTTTATTTCATAAGTTCAGATCATC...CATGTTTGTAGTCATGTTGTCAACAGAGGCAAAGTTAAGCTTGATGATGGTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| 3UTR-3UTR TCA 90 bp | TTAACCATCATCAAGCTTAACTTTGCCTCTGTTGACAACATGACTACAAACATGGACAAAAATCAAGTCTaGTGTAGAATAGCTGTCATC | + |
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Preference number: 2 (lower is better) Translates to: LTIIKLNFASVDNMTTNMDKNQV*CRIAVI Trigger: GATGACAGCTATTCTACATCAGACTTGATTTTTGTC...CATGTTTGTAGTCATGTTGTCAACAGAGGCAAAGTTAAGCTTGATGATGGTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| 3UTR-3UTR CCA 90 bp | ATCATCAAGCTTAACTTTGCCTCTGTTGACAACATGACTACAAACATGAATCAAGCCCTTTTTATTAAATaGCCTCACATCCTGAATGCA | + |
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Preference number: 2 (lower is better) Translates to: IIKLNFASVDNMTTNMNQALFIK*PHILNA Trigger: TGCATTCAGGATGTGAGGCCATTTAATAAAAAGGGC...TTGATTCATGTTTGTAGTCATGTTGTCAACAGAGGCAAAGTTAAGCTTGATGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| 3UTR CCA 72 bp | GAAAACTCTGACAGGCTTTGTGCCCTTTTTATTAAATaGCCTCACATCCTGAATGCAGGAATGTGTTCGTTT | + |
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Preference number: 3 (lower is better) Translates to: ENSDRLCALFIK*PHILNAGMCSF Trigger: AAACGAACACATTCCTGCATTCAGGATGTGAGGCCATTTAATAAAAAGGGCACAAAGCCTGTCAGAGTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| 3UTR-3UTR CAA 90 bp | ATAAGCACCGTTGAAAACTCTGACAGGCTTTGTGCCCTTTTTATTAAATGGCCTTCCAGAAGGTGGAAATaGTATTTGCAACAATCAGGG | + |
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Preference number: 3 (lower is better) Translates to: ISTVENSDRLCALFIKWPSRRWK*YLQQSG Trigger: CCCTGATTGTTGCAAATACAATTTCCACCTTCTGGA...AGGCCATTTAATAAAAAGGGCACAAAGCCTGTCAGAGTTTTCAACGGTGCTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| 3UTR-3UTR CAA 90 bp | TTAACCATCATCAAGCTTAACTTTGCCTCTGTTGACAACATGACTACAAACATGAGGTGGAAATTGTATTaGCAACAATCAGGGCAAAAC | + |
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Preference number: 3 (lower is better) Translates to: LTIIKLNFASVDNMTTNMRWKLY*QQSGQN Trigger: GTTTTGCCCTGATTGTTGCAAATACAATTTCCACCT...CATGTTTGTAGTCATGTTGTCAACAGAGGCAAAGTTAAGCTTGATGATGGTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| 3UTR-3UTR CAA 90 bp | AATCATAGTTGGTTTTTCTGTGACAATGATCTAGTACATTATTTCCTCCACAGCTCCAGAAGGTGGAAATaGTATTTGCAACAATCAGGG | + |
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Preference number: 3 (lower is better) Translates to: NHSWFFCDNDLVHYFLHSSRRWK*YLQQSG Trigger: CCCTGATTGTTGCAAATACAATTTCCACCTTCTGGA...GCTGTGGAGGAAATAATGTACTAGATCATTGTCACAGAAAAACCAACTATGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| 3UTR-3UTR CAA 90 bp | AATCATAGTTGGTTTTTCTGTGACAATGATCTAGTACATTATTTCCTCCACAGCAGGTGGAAATTGTATTaGCAACAATCAGGGCAAAAC | + |
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Preference number: 3 (lower is better) Translates to: NHSWFFCDNDLVHYFLHSRWKLY*QQSGQN Trigger: GTTTTGCCCTGATTGTTGCAAATACAATTTCCACCT...GCTGTGGAGGAAATAATGTACTAGATCATTGTCACAGAAAAACCAACTATGATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS-3UTR GCA 90 bp | TCAGAGACAATGTGGTACCTGTTTGGAATCCAGCTGGCAGCTATAAGCACCGTTCCAACTCCATCTTCCTaGCGCCTCTGCACCGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: SETMWYLFGIQLAAISTVPTPSS*RLCTAP Trigger: AGGGGCGGTGCAGAGGCGGCAGGAAGATGGAGTTGG...AACGGTGCTTATAGCTGCCAGCTGGATTCCAAACAGGTACCACATTGTCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378198.9 |
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| CDS-3UTR GCA 90 bp | TCAGAGACAATGTGGTACCTGTTTGGAATCCAGCTGGCAGCTATAAGCACCGTTCGCAGCTTGGAGATCTaGCTCAGCATCGTCCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: SETMWYLFGIQLAAISTVRSLEI*LSIVRP Trigger: TGGGCGGACGATGCTGAGGCAGATCTCCAAGCTGCG...AACGGTGCTTATAGCTGCCAGCTGGATTCCAAACAGGTACCACATTGTCTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341060.3 |
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| CDS-3UTR GCA 90 bp | TCAGAGACAATGTGGTACCTGTTTGGAATCCAGCTGGCAGCTATAAGCACCGTTGAAGCACTGAGCCACTaGGGCATCGCAGCTTGCGAC | + |
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Preference number: 4 (lower is better) Translates to: SETMWYLFGIQLAAISTVEALSH*GIAACD Trigger: GTCGCAAGCTGCGATGCCGCAGTGGCTCAGTGCTTC...AACGGTGCTTATAGCTGCCAGCTGGATTCCAAACAGGTACCACATTGTCTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378198.9 |
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| CDS-3UTR CCA 90 bp | TCAGAGACAATGTGGTACCTGTTTGGAATCCAGCTGGCAGCTATAAGCACCGTTACGCGCAGGGCTACCTaGTATCAAACTGCCTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: SETMWYLFGIQLAAISTVTRRAT*YQTASV Trigger: CACGGAGGCAGTTTGATACCAGGTAGCCCTGCGCGT...AACGGTGCTTATAGCTGCCAGCTGGATTCCAAACAGGTACCACATTGTCTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341060.3 |
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| CDS-3UTR TCA 90 bp | ATAAGCACCGTTGAAAACTCTGACAGGCTTTGTGCCCTTTTTATTAAATGGCCTTCGGCCAGGAAGCACTaGGCCACTGCGGCATCGCAG | + |
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Preference number: 4 (lower is better) Translates to: ISTVENSDRLCALFIKWPSARKH*ATAASQ Trigger: CTGCGATGCCGCAGTGGCTCAGTGCTTCCTGGCCGA...AGGCCATTTAATAAAAAGGGCACAAAGCCTGTCAGAGTTTTCAACGGTGCTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378198.9 |
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| CDS-3UTR GCA 90 bp | ATAAGCACCGTTGAAAACTCTGACAGGCTTTGTGCCCTTTTTATTAAATGGCCTCAGCAACGCAAGCCCTaGTCCTCTGGCTACGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: ISTVENSDRLCALFIKWPQQRKP*SSGYAA Trigger: AGCTGCGTAGCCAGAGGAGCAGGGCTTGCGTTGCTG...AGGCCATTTAATAAAAAGGGCACAAAGCCTGTCAGAGTTTTCAACGGTGCTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000341060.3 |
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| CDS-3UTR GCA 90 bp | GAAAACTCTGACAGGCTTTGTGCCCTTTTTATTAAATGGCCTCACATCCTGAATTCTTCCTGCCGCCTCTaGACCGCCCCTTTAAGCGGA | + |
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Preference number: 4 (lower is better) Translates to: ENSDRLCALFIKWPHILNSSCRL*TAPLSG Trigger: TCCGCTTAAAGGGGCGGTGCAGAGGCGGCAGGAAGA...ATTCAGGATGTGAGGCCATTTAATAAAAAGGGCACAAAGCCTGTCAGAGTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000378198.9 |
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| CDS-3UTR TCA 90 bp | TCAGAGACAATGTGGTACCTGTTTGGAATCCAGCTGGCAGCTATAAGCACCGTTCTGCCATTTTCTTGCTaGGTATCTTCAGATGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SETMWYLFGIQLAAISTVLPFSC*VSSDGL Trigger: CAGCCCATCTGAAGATACTCAGCAAGAAAATGGCAG...AACGGTGCTTATAGCTGCCAGCTGGATTCCAAACAGGTACCACATTGTCTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS-3UTR TCA 90 bp | TCAGAGACAATGTGGTACCTGTTTGGAATCCAGCTGGCAGCTATAAGCACCGTTCACAGAAGACCCCAGTaGTCACTAGGAAATCTACCA | + |
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Preference number: 4 (lower is better) Translates to: SETMWYLFGIQLAAISTVHRRPQ*SLGNLP Trigger: TGGTAGATTTCCTAGTGATCACTGGGGTCTTCTGTG...AACGGTGCTTATAGCTGCCAGCTGGATTCCAAACAGGTACCACATTGTCTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS-3UTR GCA 90 bp | TTAACCATCATCAAGCTTAACTTTGCCTCTGTTGACAACATGACTACAAACATGATCAAACTGCCTCCGTaGGGACTGGCTCCCGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: LTIIKLNFASVDNMTTNMIKLPP*GLAPAP Trigger: GGGAGCGGGAGCCAGTCCGCACGGAGGCAGTTTGAT...CATGTTTGTAGTCATGTTGTCAACAGAGGCAAAGTTAAGCTTGATGATGGTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341060.3 |
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| CDS-3UTR GCA 90 bp | AACATTAGCTCAGAGACAATGTGGTACCTGTTTGGAATCCAGCTGGCAGCTATAATTCGTTCCGCAGCATaGCCTCTGGTGCTCTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: NISSETMWYLFGIQLAAIIRSAA*PLVLSK Trigger: TTTGGAGAGCACCAGAGGGCATGCTGCGGAACGAAT...TATAGCTGCCAGCTGGATTCCAAACAGGTACCACATTGTCTCTGAGCTAATGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS-3UTR CCA 90 bp | AACATTAGCTCAGAGACAATGTGGTACCTGTTTGGAATCCAGCTGGCAGCTATATCTTGGGCTCAGAGATaGTTTCAGGTCGGCGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: NISSETMWYLFGIQLAAISWAQR*FQVGVP Trigger: TGGAACGCCGACCTGAAACCATCTCTGAGCCCAAGA...TATAGCTGCCAGCTGGATTCCAAACAGGTACCACATTGTCTCTGAGCTAATGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS-3UTR CCA 90 bp | ATCATCAAGCTTAACTTTGCCTCTGTTGACAACATGACTACAAACATGAATCAATGCCTCCGTGCGGACTaGCTCCCGCTCCCCTCATCA | + |
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Preference number: 4 (lower is better) Translates to: IIKLNFASVDNMTTNMNQCLRAD*LPLPSS Trigger: TGATGAGGGGAGCGGGAGCCAGTCCGCACGGAGGCA...TTGATTCATGTTTGTAGTCATGTTGTCAACAGAGGCAAAGTTAAGCTTGATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341060.3 |
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| CDS-3UTR CCA 90 bp | ATAAGCACCGTTGAAAACTCTGACAGGCTTTGTGCCCTTTTTATTAAATGGCCTCCGCAGCATGCCCTCTaGTGCTCTCCAAATGGGATG | + |
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Preference number: 4 (lower is better) Translates to: ISTVENSDRLCALFIKWPPQHAL*CSPNGM Trigger: CATCCCATTTGGAGAGCACCAGAGGGCATGCTGCGG...AGGCCATTTAATAAAAAGGGCACAAAGCCTGTCAGAGTTTTCAACGGTGCTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS-3UTR CCA 90 bp | GAAAACTCTGACAGGCTTTGTGCCCTTTTTATTAAATGGCCTCACATCCTGAATCCGCAGCATGCCCTCTaGTGCTCTCCAAATGGGATG | + |
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Preference number: 4 (lower is better) Translates to: ENSDRLCALFIKWPHILNPQHAL*CSPNGM Trigger: CATCCCATTTGGAGAGCACCAGAGGGCATGCTGCGG...ATTCAGGATGTGAGGCCATTTAATAAAAAGGGCACAAAGCCTGTCAGAGTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS-3UTR GCA 90 bp | GAAAACTCTGACAGGCTTTGTGCCCTTTTTATTAAATGGCCTCACATCCTGAATTACCTGGTATCAAACTaGCTCCGTGCGGACTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: ENSDRLCALFIKWPHILNYLVSN*LRADWL Trigger: GAGCCAGTCCGCACGGAGGCAGTTTGATACCAGGTA...ATTCAGGATGTGAGGCCATTTAATAAAAAGGGCACAAAGCCTGTCAGAGTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000341060.3 |
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| CDS-3UTR CCA 90 bp | TCAGAGACAATGTGGTACCTGTTTGGAATCCAGCTGGCAGCTATAAGCACCGTTCATCCACAATGTTGTTaGGTAAACCACCACATCTGG | + |
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Preference number: 4 (lower is better) Translates to: SETMWYLFGIQLAAISTVHPQCC*VNHHIW Trigger: CCAGATGTGGTGGTTTACCCAACAACATTGTGGATG...AACGGTGCTTATAGCTGCCAGCTGGATTCCAAACAGGTACCACATTGTCTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS-3UTR GCA 90 bp | AATCATAGTTGGTTTTTCTGTGACAATGATCTAGTACATTATTTCCTCCACAGCTGCGGCATCGCAGCTTaGGACCGAGGCAAACTCCAC | + |
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Preference number: 4 (lower is better) Translates to: NHSWFFCDNDLVHYFLHSCGIAA*DRGKLH Trigger: GTGGAGTTTGCCTCGGTCGCAAGCTGCGATGCCGCA...GCTGTGGAGGAAATAATGTACTAGATCATTGTCACAGAAAAACCAACTATGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378198.9 |
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| CDS-3UTR CCA 90 bp | ATAAGCACCGTTGAAAACTCTGACAGGCTTTGTGCCCTTTTTATTAAATGGCCTTCTTGGGCTCAGAGATaGTTTCAGGTCGGCGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: ISTVENSDRLCALFIKWPSWAQR*FQVGVP Trigger: TGGAACGCCGACCTGAAACCATCTCTGAGCCCAAGA...AGGCCATTTAATAAAAAGGGCACAAAGCCTGTCAGAGTTTTCAACGGTGCTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| 3UTR CAA 72 bp | CCTCCACAGCAAACCTACCTTTCCAGAAGGTGGAAATaGTATTTGCAACAATCAGGGCAAAACCCACACTTG | + |
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Preference number: 4 (lower is better) Translates to: PPQQTYLSRRWK*YLQQSGQNPHL Trigger: CAAGTGTGGGTTTTGCCCTGATTGTTGCAAATACAATTTCCACCTTCTGGAAAGGTAGGTTTGCTGTGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS-3UTR GCA 90 bp | AAGGTGGAAATTGTATTTGCAACAATCAGGGCAAAACCCACACTTGAAAAGCATCAGCATGCCCTCTGGTaGTCTCCAAATGGGATGTCA | + |
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Preference number: 4 (lower is better) Translates to: KVEIVFATIRAKPTLEKHQHALW*SPNGMS Trigger: TGACATCCCATTTGGAGAGCACCAGAGGGCATGCTG...ATGCTTTTCAAGTGTGGGTTTTGCCCTGATTGTTGCAAATACAATTTCCACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS-3UTR GCA 90 bp | TCAGAGACAATGTGGTACCTGTTTGGAATCCAGCTGGCAGCTATAAGCACCGTTGGTGGAAATTGTATTTaGAACAATCAGGGCAAAACC | + |
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Preference number: 4 (lower is better) Translates to: SETMWYLFGIQLAAISTVGGNCI*NNQGKT Trigger: GGTTTTGCCCTGATTGTTGCAAATACAATTTCCACC...AACGGTGCTTATAGCTGCCAGCTGGATTCCAAACAGGTACCACATTGTCTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS-3UTR CCA 90 bp | TTAACCATCATCAAGCTTAACTTTGCCTCTGTTGACAACATGACTACAAACATGTCTGGCTACGCAGCTTaGAGATCTGCCTCAGCATCG | + |
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Preference number: 4 (lower is better) Translates to: LTIIKLNFASVDNMTTNMSGYAA*RSASAS Trigger: CGATGCTGAGGCAGATCTCCAAGCTGCGTAGCCAGA...CATGTTTGTAGTCATGTTGTCAACAGAGGCAAAGTTAAGCTTGATGATGGTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341060.3 |
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| CDS-3UTR CCA 90 bp | ATCATCAAGCTTAACTTTGCCTCTGTTGACAACATGACTACAAACATGAATCAACAAGCCCTGCTCCTCTaGCTACGCAGCTTGGAGATC | + |
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Preference number: 4 (lower is better) Translates to: IIKLNFASVDNMTTNMNQQALLL*LRSLEI Trigger: GATCTCCAAGCTGCGTAGCCAGAGGAGCAGGGCTTG...TTGATTCATGTTTGTAGTCATGTTGTCAACAGAGGCAAAGTTAAGCTTGATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341060.3 |
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| CDS-3UTR CCA 90 bp | GAAAACTCTGACAGGCTTTGTGCCCTTTTTATTAAATGGCCTCACATCCTGAATCCATCTTTTCCTCCCTaGACCCCAAATCACGTTCGA | + |
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Preference number: 4 (lower is better) Translates to: ENSDRLCALFIKWPHILNPSFPP*TPNHVR Trigger: TCGAACGTGATTTGGGGTCCAGGGAGGAAAAGATGG...ATTCAGGATGTGAGGCCATTTAATAAAAAGGGCACAAAGCCTGTCAGAGTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000341060.3 |
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| CDS-3UTR CCA 90 bp | TCAGAGACAATGTGGTACCTGTTTGGAATCCAGCTGGCAGCTATAAGCACCGTTGCCCTTTTTATTAAATaGCCTCACATCCTGAATGCA | + |
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Preference number: 4 (lower is better) Translates to: SETMWYLFGIQLAAISTVALFIK*PHILNA Trigger: TGCATTCAGGATGTGAGGCCATTTAATAAAAAGGGC...AACGGTGCTTATAGCTGCCAGCTGGATTCCAAACAGGTACCACATTGTCTCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS-3UTR TCA 90 bp | AACATTAGCTCAGAGACAATGTGGTACCTGTTTGGAATCCAGCTGGCAGCTATAAAATATAACTGTAGCTaGCTCTGGAGCCTCTTGCAT | + |
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Preference number: 4 (lower is better) Translates to: NISSETMWYLFGIQLAAIKYNCS*LWSLLH Trigger: ATGCAAGAGGCTCCAGAGTCAGCTACAGTTATATTT...TATAGCTGCCAGCTGGATTCCAAACAGGTACCACATTGTCTCTGAGCTAATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS-3UTR GCA 90 bp | TTAACCATCATCAAGCTTAACTTTGCCTCTGTTGACAACATGACTACAAACATGGAAGCGACAGTCTGGTaGAGTGTTAGATCCGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LTIIKLNFASVDNMTTNMEATVW*SVRSAA Trigger: AGCAGCGGATCTAACACTGCACCAGACTGTCGCTTC...CATGTTTGTAGTCATGTTGTCAACAGAGGCAAAGTTAAGCTTGATGATGGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341060.3 |
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| CDS-3UTR CCA 90 bp | GAAAACTCTGACAGGCTTTGTGCCCTTTTTATTAAATGGCCTCACATCCTGAATCTGGTGCTCTCCAAATaGGATGTCATAAGGCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: ENSDRLCALFIKWPHILNLVLSK*DVIRQS Trigger: GCTTTGCCTTATGACATCCCATTTGGAGAGCACCAG...ATTCAGGATGTGAGGCCATTTAATAAAAAGGGCACAAAGCCTGTCAGAGTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS-3UTR CCA 90 bp | AACATTAGCTCAGAGACAATGTGGTACCTGTTTGGAATCCAGCTGGCAGCTATAGTATCCCATGTATACTaGCAATGTTTAGGTTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: NISSETMWYLFGIQLAAIVSHVY*QCLGLP Trigger: GGGCAAACCTAAACATTGCCAGTATACATGGGATAC...TATAGCTGCCAGCTGGATTCCAAACAGGTACCACATTGTCTCTGAGCTAATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS-3UTR CCA 90 bp | TCAGAGACAATGTGGTACCTGTTTGGAATCCAGCTGGCAGCTATAAGCACCGTTCAGTTGTTTCTTCATTaGTTAGGTCAACATAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: SETMWYLFGIQLAAISTVQLFLH*LGQHRS Trigger: AGACCTATGTTGACCTAACCAATGAAGAAACAACTG...AACGGTGCTTATAGCTGCCAGCTGGATTCCAAACAGGTACCACATTGTCTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378198.9 |
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| 3UTR CAA 72 bp | CAGCAAACCTACCTTTCCAGAAGGTGGAAATTGTATTaGCAACAATCAGGGCAAAACCCACACTTGAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: QQTYLSRRWKLY*QQSGQNPHLKS Trigger: GCTTTTCAAGTGTGGGTTTTGCCCTGATTGTTGCAAATACAATTTCCACCTTCTGGAAAGGTAGGTTTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS-3UTR TCA 90 bp | AACATTAGCTCAGAGACAATGTGGTACCTGTTTGGAATCCAGCTGGCAGCTATAGATGATCTGAACTTATaGAATAAAGGATCCAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: NISSETMWYLFGIQLAAIDDLNL*NKGSSP Trigger: GGGACTGGATCCTTTATTTCATAAGTTCAGATCATC...TATAGCTGCCAGCTGGATTCCAAACAGGTACCACATTGTCTCTGAGCTAATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS-3UTR GCA 90 bp | AATCATAGTTGGTTTTTCTGTGACAATGATCTAGTACATTATTTCCTCCACAGCATTCGTTCCGCAGCATaGCCTCTGGTGCTCTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: NHSWFFCDNDLVHYFLHSIRSAA*PLVLSK Trigger: TTTGGAGAGCACCAGAGGGCATGCTGCGGAACGAAT...GCTGTGGAGGAAATAATGTACTAGATCATTGTCACAGAAAAACCAACTATGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS-3UTR GCA 90 bp | TCAGAGACAATGTGGTACCTGTTTGGAATCCAGCTGGCAGCTATAAGCACCGTTAAAAATGTCCCATGGTaGTATCAAACCGATTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SETMWYLFGIQLAAISTVKNVPW*YQTDFN Trigger: GTTAAAATCGGTTTGATAGCACCATGGGACATTTTT...AACGGTGCTTATAGCTGCCAGCTGGATTCCAAACAGGTACCACATTGTCTCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS-3UTR CCA 90 bp | AATCATAGTTGGTTTTTCTGTGACAATGATCTAGTACATTATTTCCTCCACAGCTCAACACTGTTATTCTaGCCGGTCAGCCTAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NHSWFFCDNDLVHYFLHSSTLLF*PVSLGP Trigger: AGGCCCTAGGCTGACCGGCCAGAATAACAGTGTTGA...GCTGTGGAGGAAATAATGTACTAGATCATTGTCACAGAAAAACCAACTATGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341060.3 |
||
| CDS-3UTR TCA 90 bp | TTAACCATCATCAAGCTTAACTTTGCCTCTGTTGACAACATGACTACAAACATGCACAGAAGACCCCAGTaGTCACTAGGAAATCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: LTIIKLNFASVDNMTTNMHRRPQ*SLGNLP Trigger: TGGTAGATTTCCTAGTGATCACTGGGGTCTTCTGTG...CATGTTTGTAGTCATGTTGTCAACAGAGGCAAAGTTAAGCTTGATGATGGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS-3UTR GCA 90 bp | ATAAGCACCGTTGAAAACTCTGACAGGCTTTGTGCCCTTTTTATTAAATGGCCTCCTGACACGTTCACATaGACACATAAAAGGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISTVENSDRLCALFIKWPPDTFT*THKRFL Trigger: GAGAAACCTTTTATGTGTGCATGTGAACGTGTCAGG...AGGCCATTTAATAAAAAGGGCACAAAGCCTGTCAGAGTTTTCAACGGTGCTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS-3UTR CCA 90 bp | AATCATAGTTGGTTTTTCTGTGACAATGATCTAGTACATTATTTCCTCCACAGCTTCGAAGCGACAGTCTaGTGCAGTGTTAGATCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: NHSWFFCDNDLVHYFLHSFEATV*CSVRSA Trigger: AGCGGATCTAACACTGCACCAGACTGTCGCTTCGAA...GCTGTGGAGGAAATAATGTACTAGATCATTGTCACAGAAAAACCAACTATGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341060.3 |
||
| CDS-3UTR TCA 90 bp | ATAAGCACCGTTGAAAACTCTGACAGGCTTTGTGCCCTTTTTATTAAATGGCCTCTTCTGCTGCTGCTCTaGAAAATATTCGATCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ISTVENSDRLCALFIKWPLLLLL*KIFDQN Trigger: GTTTTGATCGAATATTTTTCAGAGCAGCAGCAGAAG...AGGCCATTTAATAAAAAGGGCACAAAGCCTGTCAGAGTTTTCAACGGTGCTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS-3UTR GCA 90 bp | AACATTAGCTCAGAGACAATGTGGTACCTGTTTGGAATCCAGCTGGCAGCTATAATATTATATCTAAGTTaGACAGAAGACCCCAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NISSETMWYLFGIQLAAIILYLS*TEDPSD Trigger: ATCACTGGGGTCTTCTGTGCAACTTAGATATAATAT...TATAGCTGCCAGCTGGATTCCAAACAGGTACCACATTGTCTCTGAGCTAATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS-3UTR CCA 90 bp | AATCATAGTTGGTTTTTCTGTGACAATGATCTAGTACATTATTTCCTCCACAGCCTGGTGCTCTCCAAATaGGATGTCATAAGGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NHSWFFCDNDLVHYFLHSLVLSK*DVIRQS Trigger: GCTTTGCCTTATGACATCCCATTTGGAGAGCACCAG...GCTGTGGAGGAAATAATGTACTAGATCATTGTCACAGAAAAACCAACTATGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS-3UTR TCA 90 bp | TTAACCATCATCAAGCTTAACTTTGCCTCTGTTGACAACATGACTACAAACATGAAATATAACTGTAGCTaGCTCTGGAGCCTCTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LTIIKLNFASVDNMTTNMKYNCS*LWSLLH Trigger: ATGCAAGAGGCTCCAGAGTCAGCTACAGTTATATTT...CATGTTTGTAGTCATGTTGTCAACAGAGGCAAAGTTAAGCTTGATGATGGTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS-3UTR TCA 90 bp | AAGGTGGAAATTGTATTTGCAACAATCAGGGCAAAACCCACACTTGAAAAGCATCTTCTGCTGCTGCTCTaGAAAATATTCGATCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KVEIVFATIRAKPTLEKHLLLLL*KIFDQN Trigger: GTTTTGATCGAATATTTTTCAGAGCAGCAGCAGAAG...ATGCTTTTCAAGTGTGGGTTTTGCCCTGATTGTTGCAAATACAATTTCCACCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS-3UTR TCA 90 bp | ATAAGCACCGTTGAAAACTCTGACAGGCTTTGTGCCCTTTTTATTAAATGGCCTGACAAAAATCAAGTCTaGTGTAGAATAGCTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: ISTVENSDRLCALFIKWPDKNQV*CRIAVI Trigger: GATGACAGCTATTCTACATCAGACTTGATTTTTGTC...AGGCCATTTAATAAAAAGGGCACAAAGCCTGTCAGAGTTTTCAACGGTGCTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS-3UTR CCA 90 bp | AATCATAGTTGGTTTTTCTGTGACAATGATCTAGTACATTATTTCCTCCACAGCTCACTTACTAGGTCTTaGGCTCAGAGATGGTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NHSWFFCDNDLVHYFLHSSLTRS*AQRWFQ Trigger: CTGAAACCATCTCTGAGCCCAAGACCTAGTAAGTGA...GCTGTGGAGGAAATAATGTACTAGATCATTGTCACAGAAAAACCAACTATGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341060.3 |
||
| CDS-3UTR CCA 90 bp | AAGGTGGAAATTGTATTTGCAACAATCAGGGCAAAACCCACACTTGAAAAGCATCTGAGTATCTTCAGATaGGCTGATTTTAGAAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KVEIVFATIRAKPTLEKHLSIFR*ADFRSG Trigger: ACCACTTCTAAAATCAGCCCATCTGAAGATACTCAG...ATGCTTTTCAAGTGTGGGTTTTGCCCTGATTGTTGCAAATACAATTTCCACCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS-3UTR CCA 90 bp | AATCATAGTTGGTTTTTCTGTGACAATGATCTAGTACATTATTTCCTCCACAGCCATCCACAATGTTGTTaGGTAAACCACCACATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NHSWFFCDNDLVHYFLHSHPQCC*VNHHIW Trigger: CCAGATGTGGTGGTTTACCCAACAACATTGTGGATG...GCTGTGGAGGAAATAATGTACTAGATCATTGTCACAGAAAAACCAACTATGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS-3UTR CCA 90 bp | TTAACCATCATCAAGCTTAACTTTGCCTCTGTTGACAACATGACTACAAACATGGTATCCCATGTATACTaGCAATGTTTAGGTTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LTIIKLNFASVDNMTTNMVSHVY*QCLGLP Trigger: GGGCAAACCTAAACATTGCCAGTATACATGGGATAC...CATGTTTGTAGTCATGTTGTCAACAGAGGCAAAGTTAAGCTTGATGATGGTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS-3UTR CCA 90 bp | AAGGTGGAAATTGTATTTGCAACAATCAGGGCAAAACCCACACTTGAAAAGCATGCCCTTTTTATTAAATaGCCTCACATCCTGAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: KVEIVFATIRAKPTLEKHALFIK*PHILNA Trigger: TGCATTCAGGATGTGAGGCCATTTAATAAAAAGGGC...ATGCTTTTCAAGTGTGGGTTTTGCCCTGATTGTTGCAAATACAATTTCCACCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS-3UTR TCA 90 bp | AAGGTGGAAATTGTATTTGCAACAATCAGGGCAAAACCCACACTTGAAAAGCATAAAACCATTTTTAACTaGTTCATTCGTTCCGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KVEIVFATIRAKPTLEKHKTIFN*FIRSAA Trigger: TGCTGCGGAACGAATGAATCAGTTAAAAATGGTTTT...ATGCTTTTCAAGTGTGGGTTTTGCCCTGATTGTTGCAAATACAATTTCCACCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS-3UTR CCA 90 bp | TTAACCATCATCAAGCTTAACTTTGCCTCTGTTGACAACATGACTACAAACATGCTGAGTATCTTCAGATaGGCTGATTTTAGAAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTIIKLNFASVDNMTTNMLSIFR*ADFRSG Trigger: ACCACTTCTAAAATCAGCCCATCTGAAGATACTCAG...CATGTTTGTAGTCATGTTGTCAACAGAGGCAAAGTTAAGCTTGATGATGGTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS-3UTR GCA 90 bp | ATCATCAAGCTTAACTTTGCCTCTGTTGACAACATGACTACAAACATGAATCAAGGTGGAAATTGTATTTaGAACAATCAGGGCAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: IIKLNFASVDNMTTNMNQGGNCI*NNQGKT Trigger: GGTTTTGCCCTGATTGTTGCAAATACAATTTCCACC...TTGATTCATGTTTGTAGTCATGTTGTCAACAGAGGCAAAGTTAAGCTTGATGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS-3UTR TCA 90 bp | AATCATAGTTGGTTTTTCTGTGACAATGATCTAGTACATTATTTCCTCCACAGCAAAACCATTTTTAACTaGTTCATTCGTTCCGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NHSWFFCDNDLVHYFLHSKTIFN*FIRSAA Trigger: TGCTGCGGAACGAATGAATCAGTTAAAAATGGTTTT...GCTGTGGAGGAAATAATGTACTAGATCATTGTCACAGAAAAACCAACTATGATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS-3UTR CCA 90 bp | TTAACCATCATCAAGCTTAACTTTGCCTCTGTTGACAACATGACTACAAACATGCAGTTGTTTCTTCATTaGTTAGGTCAACACTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LTIIKLNFASVDNMTTNMQLFLH*LGQHCY Trigger: ATAACAGTGTTGACCTAACCAATGAAGAAACAACTG...CATGTTTGTAGTCATGTTGTCAACAGAGGCAAAGTTAAGCTTGATGATGGTTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341060.3 |
||
| CDS-3UTR GCA 90 bp | AATCATAGTTGGTTTTTCTGTGACAATGATCTAGTACATTATTTCCTCCACAGCAAAAATGTCCCATGGTaGTATCAAACCGATTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: NHSWFFCDNDLVHYFLHSKNVPW*YQTDFN Trigger: GTTAAAATCGGTTTGATAGCACCATGGGACATTTTT...GCTGTGGAGGAAATAATGTACTAGATCATTGTCACAGAAAAACCAACTATGATT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS CCA 90 bp | CGTCCGCCCAGCTCCACGGCAGGTCCCAGGACGCGCAGGGCTACCTaGTATCAAACTGCCTCCGTGCGGACTGGCTCCCGCTCCCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RPPSSTAGPRTRRAT*YQTASVRTGSRSPH Trigger: ATGAGGGGAGCGGGAGCCAGTCCGCACGGAGGCAGTTTGATACCAGGTAGCCCTGCGCGTCCTGGGACCTGCCGTGGAGCTGGGCGGACG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000480495.1 |
||
| CDS GCA 90 bp | CCGCCTCCCTCCCGCCCTCCAGGCAACTCCCCAACTCCATCTTCCTaGCGCCTCTGCACCGCCCCTTTAAGCGGAACAGGAGGCCAACGC | + |
|
Preference number: 5 (lower is better) Translates to: PPPSRPPGNSPTPSS*RLCTAPLSGTGGQR Trigger: GCGTTGGCCTCCTGTTCCGCTTAAAGGGGCGGTGCAGAGGCGGCAGGAAGATGGAGTTGGGGAGTTGCCTGGAGGGCGGGAGGGAGGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478507.1 |
||
| CDS GCA 90 bp | GCAGCAACGCAAGCCCTGCTCCTCTGGCTACGCAGCTTGGAGATCTaGCTCAGCATCGTCCGCCCAGCTCCACGGCAGGTCCCAGGACGC | + |
|
Preference number: 5 (lower is better) Translates to: AATQALLLWLRSLEI*LSIVRPAPRQVPGR Trigger: GCGTCCTGGGACCTGCCGTGGAGCTGGGCGGACGATGCTGAGGCAGATCTCCAAGCTGCGTAGCCAGAGGAGCAGGGCTTGCGTTGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000480495.1 |
||
| CDS GCA 90 bp | CCGCTGCTGGGGCGCAACTCCGCGCAGCAGCAGCAACGCAAGCCCTaGTCCTCTGGCTACGCAGCTTGGAGATCTGCCTCAGCATCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLLGRNSAQQQQRKP*SSGYAAWRSASASS Trigger: GGACGATGCTGAGGCAGATCTCCAAGCTGCGTAGCCAGAGGAGCAGGGCTTGCGTTGCTGCTGCTGCGCGGAGTTGCGCCCCAGCAGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000480495.1 |
||
| CDS GCA 90 bp | TCCCGCCCTCCAGGCAACTCCCCAACTCCATCTTCCTGCCGCCTCTaGACCGCCCCTTTAAGCGGAACAGGAGGCCAACGCGCGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SRPPGNSPTPSSCRL*TAPLSGTGGQRAAL Trigger: CAGAGCCGCGCGTTGGCCTCCTGTTCCGCTTAAAGGGGCGGTGCAGAGGCGGCAGGAAGATGGAGTTGGGGAGTTGCCTGGAGGGCGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478507.1 |
||
| CDS CCA 90 bp | GCGCAGCAGCAGCAACGCAAGCCCTGCTCCTCTGGCTACGCAGCTTaGAGATCTGCCTCAGCATCGTCCGCCCAGCTCCACGGCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AQQQQRKPCSSGYAA*RSASASSAQLHGRS Trigger: GGACCTGCCGTGGAGCTGGGCGGACGATGCTGAGGCAGATCTCCAAGCTGCGTAGCCAGAGGAGCAGGGCTTGCGTTGCTGCTGCTGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000480495.1 |
||
| CDS CCA 90 bp | GGGGCGCAACTCCGCGCAGCAGCAGCAACGCAAGCCCTGCTCCTCTaGCTACGCAGCTTGGAGATCTGCCTCAGCATCGTCCGCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GAQLRAAAATQALLL*LRSLEICLSIVRPA Trigger: AGCTGGGCGGACGATGCTGAGGCAGATCTCCAAGCTGCGTAGCCAGAGGAGCAGGGCTTGCGTTGCTGCTGCTGCGCGGAGTTGCGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000480495.1 |
||
| CDS CCA 90 bp | TGGCTCCCGCTCCCCTCATCACTTACTAGGTCTTGGGCTCAGAGATaGTTTCAGGTCGGCGTTCCAAGGCGCTCTCCTCCACCGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: WLPLPSSLTRSWAQR*FQVGVPRRSPPPEA Trigger: AGCCTCCGGTGGAGGAGAGCGCCTTGGAACGCCGACCTGAAACCATCTCTGAGCCCAAGACCTAGTAAGTGATGAGGGGAGCGGGAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000480495.1 |
||
| CDS CCA 90 bp | CAGGACGCGCAGGGCTACCTGGTATCAAACTGCCTCCGTGCGGACTaGCTCCCGCTCCCCTCATCACTTACTAGGTCTTGGGCTCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QDAQGYLVSNCLRAD*LPLPSSLTRSWAQR Trigger: TCTCTGAGCCCAAGACCTAGTAAGTGATGAGGGGAGCGGGAGCCAGTCCGCACGGAGGCAGTTTGATACCAGGTAGCCCTGCGCGTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000480495.1 |
||
| CDS GCA 90 bp | GTCGTTCTCGGCCAGGAAGCACTGAGCCACTGCGGCATCGCAGCTTaGGACCGAGGCAAACTCCACACACAGAAGTCGCCGCTTTTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VVLGQEALSHCGIAA*DRGKLHTQKSPLFH Trigger: GTGAAAAAGCGGCGACTTCTGTGTGTGGAGTTTGCCTCGGTCGCAAGCTGCGATGCCGCAGTGGCTCAGTGCTTCCTGGCCGAGAACGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378198.9 ENST00000478507.1 |
||
| CDS-3UTR CAA 90 bp | TCAGAGACAATGTGGTACCTGTTTGGAATCCAGCTGGCAGCTATAAGCACCGTTCAATGTGGTACCTGTTaGGAATCCAGCTGGCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: SETMWYLFGIQLAAISTVQCGTC*ESSWQL Trigger: TAGCTGCCAGCTGGATTCCAAACAGGTACCACATTG...AACGGTGCTTATAGCTGCCAGCTGGATTCCAAACAGGTACCACATTGTCTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS-3UTR CAA 90 bp | GAAAACTCTGACAGGCTTTGTGCCCTTTTTATTAAATGGCCTCACATCCTGAATCTCTGGCTACGCAGCTaGGAGATCTGCCTCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: ENSDRLCALFIKWPHILNLWLRS*EICLSI Trigger: GATGCTGAGGCAGATCTCCAAGCTGCGTAGCCAGAG...ATTCAGGATGTGAGGCCATTTAATAAAAAGGGCACAAAGCCTGTCAGAGTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000341060.3 |
||
| CDS-3UTR CAA 90 bp | TTAACCATCATCAAGCTTAACTTTGCCTCTGTTGACAACATGACTACAAACATGCTGCGGCATCGCAGCTaGCGACCGAGGCAAACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LTIIKLNFASVDNMTTNMLRHRS*RPRQTP Trigger: TGGAGTTTGCCTCGGTCGCAAGCTGCGATGCCGCAG...CATGTTTGTAGTCATGTTGTCAACAGAGGCAAAGTTAAGCTTGATGATGGTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378198.9 |
||
| CDS-3UTR CAA 90 bp | AACATTAGCTCAGAGACAATGTGGTACCTGTTTGGAATCCAGCTGGCAGCTATAACATCCACAATGTTGTaGGGTAAACCACCACATCTG | + |
|
Preference number: 5 (lower is better) Translates to: NISSETMWYLFGIQLAAITSTML*GKPPHL Trigger: CAGATGTGGTGGTTTACCCAACAACATTGTGGATGT...TATAGCTGCCAGCTGGATTCCAAACAGGTACCACATTGTCTCTGAGCTAATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS-3UTR CAA 90 bp | AACATTAGCTCAGAGACAATGTGGTACCTGTTTGGAATCCAGCTGGCAGCTATATGGCAATGTTTAGGTTaGCCCAAAAACTCCCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: NISSETMWYLFGIQLAAIWQCLG*PKNSQT Trigger: TGTCTGGGAGTTTTTGGGCAAACCTAAACATTGCCA...TATAGCTGCCAGCTGGATTCCAAACAGGTACCACATTGTCTCTGAGCTAATGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS-3UTR CAA 90 bp | GAAAACTCTGACAGGCTTTGTGCCCTTTTTATTAAATGGCCTCACATCCTGAATACATCCACAATGTTGTaGGGTAAACCACCACATCTG | + |
|
Preference number: 5 (lower is better) Translates to: ENSDRLCALFIKWPHILNTSTML*GKPPHL Trigger: CAGATGTGGTGGTTTACCCAACAACATTGTGGATGT...ATTCAGGATGTGAGGCCATTTAATAAAAAGGGCACAAAGCCTGTCAGAGTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS-3UTR CAA 90 bp | GAAAACTCTGACAGGCTTTGTGCCCTTTTTATTAAATGGCCTCACATCCTGAATCAGACATCCACAATGTaGTTGGGTAAACCACCACAT | + |
|
Preference number: 5 (lower is better) Translates to: ENSDRLCALFIKWPHILNQTSTM*LGKPPH Trigger: ATGTGGTGGTTTACCCAACAACATTGTGGATGTCTG...ATTCAGGATGTGAGGCCATTTAATAAAAAGGGCACAAAGCCTGTCAGAGTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS-3UTR CAA 90 bp | ATAAGCACCGTTGAAAACTCTGACAGGCTTTGTGCCCTTTTTATTAAATGGCCTCAGACATCCACAATGTaGTTGGGTAAACCACCACAT | + |
|
Preference number: 5 (lower is better) Translates to: ISTVENSDRLCALFIKWPQTSTM*LGKPPH Trigger: ATGTGGTGGTTTACCCAACAACATTGTGGATGTCTG...AGGCCATTTAATAAAAAGGGCACAAAGCCTGTCAGAGTTTTCAACGGTGCTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS-3UTR CAA 90 bp | ATAAGCACCGTTGAAAACTCTGACAGGCTTTGTGCCCTTTTTATTAAATGGCCTTGGCAATGTTTAGGTTaGCCCAAAAACTCCCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: ISTVENSDRLCALFIKWPWQCLG*PKNSQT Trigger: TGTCTGGGAGTTTTTGGGCAAACCTAAACATTGCCA...AGGCCATTTAATAAAAAGGGCACAAAGCCTGTCAGAGTTTTCAACGGTGCTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS-3UTR CAA 90 bp | GAAAACTCTGACAGGCTTTGTGCCCTTTTTATTAAATGGCCTCACATCCTGAATAAGGAGACTTCCAAGTaGCCATTTTTCGATAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ENSDRLCALFIKWPHILNKETSK*PFFDRR Trigger: CCTTCTATCGAAAAATGGCAACTTGGAAGTCTCCTT...ATTCAGGATGTGAGGCCATTTAATAAAAAGGGCACAAAGCCTGTCAGAGTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000341060.3 |
||
| CDS-3UTR CAA 90 bp | GAAAACTCTGACAGGCTTTGTGCCCTTTTTATTAAATGGCCTCACATCCTGAATTCCAGAAGGTGGAAATaGTATTTGCAACAATCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ENSDRLCALFIKWPHILNSRRWK*YLQQSG Trigger: CCCTGATTGTTGCAAATACAATTTCCACCTTCTGGA...ATTCAGGATGTGAGGCCATTTAATAAAAAGGGCACAAAGCCTGTCAGAGTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
||
| CDS GCA 90 bp | GGTAGGATCTCTGACATCAGAATCATAAGGCTTTTGTTTAAGCATTaGTTAAGATGTTTTTCAGACGCTGAATTCCAGCAGAAAGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GRISDIRIIRLLFKH*LRCFSDAEFQQKAD Trigger: GTCAGCTTTCTGCTGGAATTCAGCGTCTGAAAAACATCTTAAGCAATGCTTAAACAAAAGCCTTATGATTCTGATGTCAGAGATCCTACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000478285.1 |
||
| CDS CCA 90 bp | GCAGTTATTCCAAGATTAGAGTTCATTTGTGTATCCCATGTATACTaGCAATGTTTAGGTTTGCCCAAAAACTCCCAGACATCCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: AVIPRLEFICVSHVY*QCLGLPKNSQTSTM Trigger: CATTGTGGATGTCTGGGAGTTTTTGGGCAAACCTAAACATTGCCAGTATACATGGGATACACAAATGAACTCTAATCTTGGAATAACTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS-3UTR CAA 90 bp | ATCATCAAGCTTAACTTTGCCTCTGTTGACAACATGACTACAAACATGAATCAACATGCTGCCATTTTCTaGCTGAGTATCTTCAGATGG | + |
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Preference number: 5 (lower is better) Translates to: IIKLNFASVDNMTTNMNQHAAIF*LSIFRW Trigger: CCATCTGAAGATACTCAGCAAGAAAATGGCAGCATG...TTGATTCATGTTTGTAGTCATGTTGTCAACAGAGGCAAAGTTAAGCTTGATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS-3UTR CAA 90 bp | TTAACCATCATCAAGCTTAACTTTGCCTCTGTTGACAACATGACTACAAACATGGCCCTCTCTGACAGATaGTTTAGATCTAATCCATCA | + |
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Preference number: 5 (lower is better) Translates to: LTIIKLNFASVDNMTTNMALSDR*FRSNPS Trigger: TGATGGATTAGATCTAAACAATCTGTCAGAGAGGGC...CATGTTTGTAGTCATGTTGTCAACAGAGGCAAAGTTAAGCTTGATGATGGTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS-3UTR CAA 90 bp | TTAACCATCATCAAGCTTAACTTTGCCTCTGTTGACAACATGACTACAAACATGTTAGCCTTCGTTCATTaGTTTCAAACCTCTCGCTTA | + |
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Preference number: 5 (lower is better) Translates to: LTIIKLNFASVDNMTTNMLAFVH*FQTSRL Trigger: TAAGCGAGAGGTTTGAAACAAATGAACGAAGGCTAA...CATGTTTGTAGTCATGTTGTCAACAGAGGCAAAGTTAAGCTTGATGATGGTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341060.3 |
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| CDS-3UTR CAA 90 bp | TTAACCATCATCAAGCTTAACTTTGCCTCTGTTGACAACATGACTACAAACATGAAGTGGTGGAATCAGTaGTTTCTTCATTGGTTAGGT | + |
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Preference number: 5 (lower is better) Translates to: LTIIKLNFASVDNMTTNMKWWNQ*FLHWLG Trigger: ACCTAACCAATGAAGAAACAACTGATTCCACCACTT...CATGTTTGTAGTCATGTTGTCAACAGAGGCAAAGTTAAGCTTGATGATGGTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS-3UTR CAA 90 bp | ATCATCAAGCTTAACTTTGCCTCTGTTGACAACATGACTACAAACATGAATCAAGCCCTCTCTGACAGATaGTTTAGATCTAATCCATCA | + |
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Preference number: 5 (lower is better) Translates to: IIKLNFASVDNMTTNMNQALSDR*FRSNPS Trigger: TGATGGATTAGATCTAAACAATCTGTCAGAGAGGGC...TTGATTCATGTTTGTAGTCATGTTGTCAACAGAGGCAAAGTTAAGCTTGATGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS TCA 90 bp | GAAGGTGGAAATTGTATTTGCAACAATCAGGGCAAAACCCACACTTaGAAAGCATTTTACAATATTATATCTAAGTTGCACAGAAGACCC | + |
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Preference number: 5 (lower is better) Translates to: EGGNCICNNQGKTHT*KAFYNIISKLHRRP Trigger: GGGTCTTCTGTGCAACTTAGATATAATATTGTAAAATGCTTTTCAAGTGTGGGTTTTGCCCTGATTGTTGCAAATACAATTTCCACCTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS-3UTR CAA 90 bp | ATCATCAAGCTTAACTTTGCCTCTGTTGACAACATGACTACAAACATGAATCAAAGGTGGAAATTGTATTaGCAACAATCAGGGCAAAAC | + |
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Preference number: 5 (lower is better) Translates to: IIKLNFASVDNMTTNMNQRWKLY*QQSGQN Trigger: GTTTTGCCCTGATTGTTGCAAATACAATTTCCACCT...TTGATTCATGTTTGTAGTCATGTTGTCAACAGAGGCAAAGTTAAGCTTGATGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS CCA 72 bp | AGCTCCACGGCAGGTCCCAGGACGCGCAGGGCTACCTaGTATCAAACTGCCTCCGTGCGGACTGGCTCCCGC | + |
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Preference number: 6 (lower is better) Translates to: SSTAGPRTRRAT*YQTASVRTGSR Trigger: GCGGGAGCCAGTCCGCACGGAGGCAGTTTGATACCAGGTAGCCCTGCGCGTCCTGGGACCTGCCGTGGAGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000480495.1 |
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| CDS CAA 90 bp | CGCGCAGCAGCAGCAACGCAAGCCCTGCTCCTCTGGCTACGCAGCTaGGAGATCTGCCTCAGCATCGTCCGCCCAGCTCCACGGCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: RAAAATQALLLWLRS*EICLSIVRPAPRQV Trigger: GACCTGCCGTGGAGCTGGGCGGACGATGCTGAGGCAGATCTCCAAGCTGCGTAGCCAGAGGAGCAGGGCTTGCGTTGCTGCTGCTGCGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000480495.1 |
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| CDS GCA 72 bp | AGGTCCCAGGACGCGCAGGGCTACCTGGTATCAAACTaGCTCCGTGCGGACTGGCTCCCGCTCCCCTCATCA | + |
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Preference number: 6 (lower is better) Translates to: RSQDAQGYLVSN*LRADWLPLPSS Trigger: TGATGAGGGGAGCGGGAGCCAGTCCGCACGGAGGCAGTTTGATACCAGGTAGCCCTGCGCGTCCTGGGACCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000480495.1 |
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| CDS GCA 72 bp | CAAGCCCTGCTCCTCTGGCTACGCAGCTTGGAGATCTaGCTCAGCATCGTCCGCCCAGCTCCACGGCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: QALLLWLRSLEI*LSIVRPAPRQV Trigger: GACCTGCCGTGGAGCTGGGCGGACGATGCTGAGGCAGATCTCCAAGCTGCGTAGCCAGAGGAGCAGGGCTTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000480495.1 |
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| CDS GCA 72 bp | GGGCGCAACTCCGCGCAGCAGCAGCAACGCAAGCCCTaGTCCTCTGGCTACGCAGCTTGGAGATCTGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: GRNSAQQQQRKP*SSGYAAWRSAS Trigger: TGAGGCAGATCTCCAAGCTGCGTAGCCAGAGGAGCAGGGCTTGCGTTGCTGCTGCTGCGCGGAGTTGCGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000480495.1 |
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| CDS GCA 72 bp | GGCCAGGAAGCACTGAGCCACTGCGGCATCGCAGCTTaGGACCGAGGCAAACTCCACACACAGAAGTCGCCG | + |
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Preference number: 6 (lower is better) Translates to: GQEALSHCGIAA*DRGKLHTQKSP Trigger: CGGCGACTTCTGTGTGTGGAGTTTGCCTCGGTCGCAAGCTGCGATGCCGCAGTGGCTCAGTGCTTCCTGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378198.9 ENST00000478507.1 |
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| CDS GCA 72 bp | CTCCCAGTCGTTCTCGGCCAGGAAGCACTGAGCCACTaGGGCATCGCAGCTTGCGACCGAGGCAAACTCCAC | + |
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Preference number: 6 (lower is better) Translates to: LPVVLGQEALSH*GIAACDRGKLH Trigger: GTGGAGTTTGCCTCGGTCGCAAGCTGCGATGCCGCAGTGGCTCAGTGCTTCCTGGCCGAGAACGACTGGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000378198.9 ENST00000478507.1 ENST00000480495.1 |
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| CDS GCA 72 bp | CCAGGCAACTCCCCAACTCCATCTTCCTGCCGCCTCTaGACCGCCCCTTTAAGCGGAACAGGAGGCCAACGC | + |
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Preference number: 6 (lower is better) Translates to: PGNSPTPSSCRL*TAPLSGTGGQR Trigger: GCGTTGGCCTCCTGTTCCGCTTAAAGGGGCGGTGCAGAGGCGGCAGGAAGATGGAGTTGGGGAGTTGCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478507.1 |
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| CDS CCA 72 bp | CAGCAACGCAAGCCCTGCTCCTCTGGCTACGCAGCTTaGAGATCTGCCTCAGCATCGTCCGCCCAGCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: QQRKPCSSGYAA*RSASASSAQLH Trigger: GTGGAGCTGGGCGGACGATGCTGAGGCAGATCTCCAAGCTGCGTAGCCAGAGGAGCAGGGCTTGCGTTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000480495.1 |
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| CDS CAA 72 bp | CGGCCAGGAAGCACTGAGCCACTGCGGCATCGCAGCTaGCGACCGAGGCAAACTCCACACACAGAAGTCGCC | + |
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Preference number: 6 (lower is better) Translates to: RPGSTEPLRHRS*RPRQTPHTEVA Trigger: GGCGACTTCTGTGTGTGGAGTTTGCCTCGGTCGCAAGCTGCGATGCCGCAGTGGCTCAGTGCTTCCTGGCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378198.9 ENST00000478507.1 |
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| CDS GCA 72 bp | CCTGGACCCCAAATCACGTTCGAAGCGACAGTCTGGTaGAGTGTTAGATCCGCTGCTGGGGCGCAACTCCGC | + |
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Preference number: 6 (lower is better) Translates to: PGPQITFEATVW*SVRSAAGAQLR Trigger: GCGGAGTTGCGCCCCAGCAGCGGATCTAACACTGCACCAGACTGTCGCTTCGAACGTGATTTGGGGTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000480495.1 |
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| CDS CCA 72 bp | CAGGGCTACCTGGTATCAAACTGCCTCCGTGCGGACTaGCTCCCGCTCCCCTCATCACTTACTAGGTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: QGYLVSNCLRAD*LPLPSSLTRSW Trigger: CCAAGACCTAGTAAGTGATGAGGGGAGCGGGAGCCAGTCCGCACGGAGGCAGTTTGATACCAGGTAGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000480495.1 |
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| CDS CCA 72 bp | CTCCCTGGACCCCAAATCACGTTCGAAGCGACAGTCTaGTGCAGTGTTAGATCCGCTGCTGGGGCGCAACTC | + |
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Preference number: 6 (lower is better) Translates to: LPGPQITFEATV*CSVRSAAGAQL Trigger: GAGTTGCGCCCCAGCAGCGGATCTAACACTGCACCAGACTGTCGCTTCGAACGTGATTTGGGGTCCAGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000480495.1 |
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| CDS CAA 90 bp | AGTCGTTCTCGGCCAGGAAGCACTGAGCCACTGCGGCATCGCAGCTaGCGACCGAGGCAAACTCCACACACAGAAGTCGCCGCTTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: SRSRPGSTEPLRHRS*RPRQTPHTEVAAFS Trigger: TGAAAAAGCGGCGACTTCTGTGTGTGGAGTTTGCCTCGGTCGCAAGCTGCGATGCCGCAGTGGCTCAGTGCTTCCTGGCCGAGAACGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378198.9 ENST00000478507.1 |
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| CDS CCA 72 bp | CTCCCCTCATCACTTACTAGGTCTTGGGCTCAGAGATaGTTTCAGGTCGGCGTTCCAAGGCGCTCTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: LPSSLTRSWAQR*FQVGVPRRSPP Trigger: TGGAGGAGAGCGCCTTGGAACGCCGACCTGAAACCATCTCTGAGCCCAAGACCTAGTAAGTGATGAGGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000480495.1 |
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| CDS CCA 72 bp | TTTCCTGACACGTTCACTAGGTCTTGGGCTCAGAGATaGTTTCAGGTCGGCGTTCCAAGGCGCTCTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: FPDTFTRSWAQR*FQVGVPRRSPP Trigger: TGGAGGAGAGCGCCTTGGAACGCCGACCTGAAACCATCTCTGAGCCCAAGACCTAGTGAACGTGTCAGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478507.1 |
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| CDS CCA 72 bp | CATTGGTTAGGTCAACATAGGTCTTGGGCTCAGAGATaGTTTCAGGTCGGCGTTCCAAGGCGCTCTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: HWLGQHRSWAQR*FQVGVPRRSPP Trigger: TGGAGGAGAGCGCCTTGGAACGCCGACCTGAAACCATCTCTGAGCCCAAGACCTATGTTGACCTAACCAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378198.9 |
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| CDS CCA 72 bp | ATTCGTTCCGCAGCATGCCCTCTGGTGCTCTCCAAATaGGATGTCATAAGGCAAAGCTCATTTCCTGACACG | + |
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Preference number: 6 (lower is better) Translates to: IRSAACPLVLSK*DVIRQSSFPDT Trigger: CGTGTCAGGAAATGAGCTTTGCCTTATGACATCCCATTTGGAGAGCACCAGAGGGCATGCTGCGGAACGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000341060.3 ENST00000378198.9 ENST00000478507.1 |
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| CDS CAA 72 bp | ACGCTGAATTCCAGCAGAAAGCTGACACCAACCAGTTaGAAGACACCCCGACAGGAACCGAATCAGCATGAG | + |
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Preference number: 6 (lower is better) Translates to: TLNSSRKLTPTS*KTPRQEPNQHE Trigger: CTCATGCTGATTCGGTTCCTGTCGGGGTGTCTTCAAACTGGTTGGTGTCAGCTTTCTGCTGGAATTCAGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478285.1 |
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| CDS CAA 72 bp | GGTTTGCCCAAAAACTCCCAGACATCCACAATGTTGTaGGGTAAACCACCACATCTGGTAACCTCTCGATCC | + |
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Preference number: 6 (lower is better) Translates to: GLPKNSQTSTML*GKPPHLVTSRS Trigger: GGATCGAGAGGTTACCAGATGTGGTGGTTTACCCAACAACATTGTGGATGTCTGGGAGTTTTTGGGCAAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000341060.3 ENST00000378198.9 ENST00000478507.1 |
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| CDS CAA 90 bp | GTTTTTCAGACGCTGAATTCCAGCAGAAAGCTGACACCAACCAGTTaGAAGACACCCCGACAGGAACCGAATCAGCATGAGAATGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: VFQTLNSSRKLTPTS*KTPRQEPNQHENAV Trigger: AACTGCATTCTCATGCTGATTCGGTTCCTGTCGGGGTGTCTTCAAACTGGTTGGTGTCAGCTTTCTGCTGGAATTCAGCGTCTGAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000478285.1 |
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| CDS CAA 90 bp | TGGCAATGTTTAGGTTTGCCCAAAAACTCCCAGACATCCACAATGTaGTTGGGTAAACCACCACATCTGGTAACCTCTCGATCCCTTAGA | + |
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Preference number: 6 (lower is better) Translates to: WQCLGLPKNSQTSTM*LGKPPHLVTSRSLR Trigger: TCTAAGGGATCGAGAGGTTACCAGATGTGGTGGTTTACCCAACAACATTGTGGATGTCTGGGAGTTTTTGGGCAAACCTAAACATTGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000341060.3 ENST00000378198.9 ENST00000478507.1 |
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| CDS CAA 72 bp | TTAGGTTTGCCCAAAAACTCCCAGACATCCACAATGTaGTTGGGTAAACCACCACATCTGGTAACCTCTCGA | + |
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Preference number: 6 (lower is better) Translates to: LGLPKNSQTSTM*LGKPPHLVTSR Trigger: TCGAGAGGTTACCAGATGTGGTGGTTTACCCAACAACATTGTGGATGTCTGGGAGTTTTTGGGCAAACCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000341060.3 ENST00000378198.9 ENST00000478507.1 |
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| CDS CAA 90 bp | CAATGTTTAGGTTTGCCCAAAAACTCCCAGACATCCACAATGTTGTaGGGTAAACCACCACATCTGGTAACCTCTCGATCCCTTAGATTT | + |
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Preference number: 6 (lower is better) Translates to: QCLGLPKNSQTSTML*GKPPHLVTSRSLRF Trigger: AAATCTAAGGGATCGAGAGGTTACCAGATGTGGTGGTTTACCCAACAACATTGTGGATGTCTGGGAGTTTTTGGGCAAACCTAAACATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000341060.3 ENST00000378198.9 ENST00000478507.1 |
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| CDS CAA 90 bp | TTAGAGTTCATTTGTGTATCCCATGTATACTGGCAATGTTTAGGTTaGCCCAAAAACTCCCAGACATCCACAATGTTGTTGGGTAAACCA | + |
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Preference number: 6 (lower is better) Translates to: LEFICVSHVYWQCLG*PKNSQTSTMLLGKP Trigger: TGGTTTACCCAACAACATTGTGGATGTCTGGGAGTTTTTGGGCAAACCTAAACATTGCCAGTATACATGGGATACACAAATGAACTCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS CAA 72 bp | ATTTGTGTATCCCATGTATACTGGCAATGTTTAGGTTaGCCCAAAAACTCCCAGACATCCACAATGTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: ICVSHVYWQCLG*PKNSQTSTMLL Trigger: CAACAACATTGTGGATGTCTGGGAGTTTTTGGGCAAACCTAAACATTGCCAGTATACATGGGATACACAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS CAA 90 bp | ATTGCTCCTATGGGTAGGATCTCTGACATCAGAATCATAAGGCTTTaGTTTAAGCATTGCTTAAGATGTTTTTCAGACGCTGAATTCCAG | + |
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Preference number: 6 (lower is better) Translates to: IAPMGRISDIRIIRL*FKHCLRCFSDAEFQ Trigger: CTGGAATTCAGCGTCTGAAAAACATCTTAAGCAATGCTTAAACAAAAGCCTTATGATTCTGATGTCAGAGATCCTACCCATAGGAGCAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478285.1 |
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| CDS GCA 72 bp | TCTGACATCAGAATCATAAGGCTTTTGTTTAAGCATTaGTTAAGATGTTTTTCAGACGCTGAATTCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SDIRIIRLLFKH*LRCFSDAEFQQ Trigger: CTGCTGGAATTCAGCGTCTGAAAAACATCTTAAGCAATGCTTAAACAAAAGCCTTATGATTCTGATGTCAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000478285.1 |
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| CDS CAA 90 bp | AAAACGAAGTTTACAAGCAGCAGTTATTCCAAGATTAGAGTTCATTaGTGTATCCCATGTATACTGGCAATGTTTAGGTTTGCCCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: KTKFTSSSYSKIRVH*CIPCILAMFRFAQK Trigger: TTTTTGGGCAAACCTAAACATTGCCAGTATACATGGGATACACAAATGAACTCTAATCTTGGAATAACTGCTGCTTGTAAACTTCGTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000378198.9 |
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| CDS CAA 72 bp | TGCCATTTTTCGATAGAAGGTTTAGCCTTCGTTCATTaGTTTCAAACCTCTCGCTTACTTATTTCCTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: CHFSIEGLAFVH*FQTSRLLISFH Trigger: ATGAAAGGAAATAAGTAAGCGAGAGGTTTGAAACAAATGAACGAAGGCTAAACCTTCTATCGAAAAATGGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341060.3 ENST00000480495.1 |
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