Pregenerated sensors for TDO2 (Homo sapiens)
Ensembl gene IDs: ENSG00000151790Ensembl transcript IDs: ENST00000503634.5, ENST00000506072.5, ENST00000506181.5, ENST00000507590.5, ENST00000509738.1, ENST00000510293.1, ENST00000512584.5, ENST00000536354.3, ENST00000570498.5, ENST00000571694.5, ENST00000573403.1, ENST00000573644.5, ENST00000573999.1, ENST00000574434.5, ENST00000576270.5, ENST00000576687.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CACTCACAGTTGATCGCAGGTAGTGATAGCCTGAGGAACCACCGGTaGCAGCTTTGCTGCCCAGCATTCTGTGCACCATGCACACATGGT | + |
|
Preference number: 5 (lower is better) Translates to: HSQLIAGSDSLRNHR*QLCCPAFCAPCTHG Trigger: ACCATGTGTGCATGGTGCACAGAATGCTGGGCAGCAAAGCTGGCACCGGTGGTTCCTCAGGCTATCACTACCTGCGATCAACTGTGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000512584.5 ENST00000536354.3 ENST00000573403.1 ENST00000576270.5 |
||
| CDS GCA 90 bp | ATCTCACAGTTGATCGCAGGTAGTGATAGCCTGAGGAACCACCGGTaGCAGCTTTGCTGCCCAGCATTCTGTGCACCATGCACACATGGT | + |
|
Preference number: 5 (lower is better) Translates to: ISQLIAGSDSLRNHR*QLCCPAFCAPCTHG Trigger: ACCATGTGTGCATGGTGCACAGAATGCTGGGCAGCAAAGCTGGCACCGGTGGTTCCTCAGGCTATCACTACCTGCGATCAACTGTGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000510293.1 ENST00000573999.1 |
||
| CDS GCA 90 bp | TTGATCGCAGGTAGTGATAGCCTGAGGAACCACCGGTGCCAGCTTTaGTGCCCAGCATTCTGTGCACCATGCACACATGGTTATATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LIAGSDSLRNHRCQL*CPAFCAPCTHGYIS Trigger: GGAGATATAACCATGTGTGCATGGTGCACAGAATGCTGGGCAGCAAAGCTGGCACCGGTGGTTCCTCAGGCTATCACTACCTGCGATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000510293.1 ENST00000512584.5 ENST00000536354.3 ENST00000573403.1 ENST00000573999.1 ENST00000576270.5 |
||
| CDS GCA 90 bp | ATCGCAGGTAGTGATAGCCTGAGGAACCACCGGTGCCAGCTTTGCTaGCCAGCATTCTGTGCACCATGCACACATGGTTATATCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: IAGSDSLRNHRCQLC*PAFCAPCTHGYISI Trigger: AATGGAGATATAACCATGTGTGCATGGTGCACAGAATGCTGGGCAGCAAAGCTGGCACCGGTGGTTCCTCAGGCTATCACTACCTGCGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000510293.1 ENST00000512584.5 ENST00000536354.3 ENST00000573403.1 ENST00000573999.1 ENST00000576270.5 |
||
| CDS GCA 90 bp | TCATTGAAGTCCAAGGCTGTCATCGTCTCCAGAATGGAAAACTGCTaGACCAGCAGTTTCAGGATCACTGACACTCGGTGCATCCGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SLKSKAVIVSRMENC*TSSFRITDTRCIRE Trigger: TTCTCGGATGCACCGAGTGTCAGTGATCCTGAAACTGCTGGTGCAGCAGTTTTCCATTCTGGAGACGATGACAGCCTTGGACTTCAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000506072.5 ENST00000507590.5 ENST00000512584.5 ENST00000536354.3 ENST00000573403.1 ENST00000573644.5 ENST00000574434.5 ENST00000576270.5 |
||
| CDS GCA 90 bp | AAGTCATTGAAGTCCAAGGCTGTCATCGTCTCCAGAATGGAAAACTaGTGCACCAGCAGTTTCAGGATCACTGACACTCGGTGCATCCGA | + |
|
Preference number: 5 (lower is better) Translates to: KSLKSKAVIVSRMEN*CTSSFRITDTRCIR Trigger: TCGGATGCACCGAGTGTCAGTGATCCTGAAACTGCTGGTGCAGCAGTTTTCCATTCTGGAGACGATGACAGCCTTGGACTTCAATGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000506072.5 ENST00000507590.5 ENST00000512584.5 ENST00000536354.3 ENST00000573403.1 ENST00000573644.5 ENST00000574434.5 ENST00000576270.5 |
||
| CDS TCA 90 bp | CGTCTCCAGAATGGAAAACTGCTGCACCAGCAGTTTCAGGATCACTaGCACTCGGTGCATCCGAGAAACAACCTTAAGCATGTTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLQNGKLLHQQFQDH*HSVHPRNNLKHVPF Trigger: GAAAGGAACATGCTTAAGGTTGTTTCTCGGATGCACCGAGTGTCAGTGATCCTGAAACTGCTGGTGCAGCAGTTTTCCATTCTGGAGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000506072.5 ENST00000507590.5 ENST00000512584.5 ENST00000536354.3 ENST00000573403.1 ENST00000573644.5 ENST00000574434.5 ENST00000576270.5 |
||
| CDS CCA 90 bp | CTAAGAAACTTGGCTAAAGTTGTGCAGGTTATAAGAGGCGAGGAATaGACCGGAAGCCTGATCTTCCATTGTGAAGCCCATCTCATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LRNLAKVVQVIRGEE*TGSLIFHCEAHLML Trigger: GAGCATGAGATGGGCTTCACAATGGAAGATCAGGCTTCCGGTCCATTCCTCGCCTCTTATAACCTGCACAACTTTAGCCAAGTTTCTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506181.5 ENST00000571694.5 |
||
| CDS GCA 90 bp | ATGGAAAACTGCTGCACCAGCAGTTTCAGGATCACTGACACTCGGTaGATCCGAGAAACAACCTTAAGCATGTTCCTTTCATCTCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: MENCCTSSFRITDTR*IRETTLSMFLSSLT Trigger: TGTCAGAGATGAAAGGAACATGCTTAAGGTTGTTTCTCGGATGCACCGAGTGTCAGTGATCCTGAAACTGCTGGTGCAGCAGTTTTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000506072.5 ENST00000507590.5 ENST00000512584.5 ENST00000536354.3 ENST00000573403.1 ENST00000573644.5 ENST00000574434.5 ENST00000576270.5 |
||
| CDS TCA 90 bp | CCTCCACAAAGGGATTCATTGCCTCTTCTGAGGCAAATGCGTATTTaGCTTCTTCCTCTGGTCTATGTTTACTTTATCCTAACACTCACT | + |
|
Preference number: 5 (lower is better) Translates to: PPQRDSLPLLRQMRI*LLPLVYVYFILTLT Trigger: AGTGAGTGTTAGGATAAAGTAAACATAGACCAGAGGAAGAAGTCAAATACGCATTTGCCTCAGAAGAGGCAATGAATCCCTTTGTGGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506181.5 ENST00000571694.5 |
||
| CDS TCA 90 bp | ACTATATTGAACCTTTCCCTCCACAAAGGGATTCATTGCCTCTTCTaGGGCAAATGCGTATTTGACTTCTTCCTCTGGTCTATGTTTACT | + |
|
Preference number: 5 (lower is better) Translates to: TILNLSLHKGIHCLF*GKCVFDFFLWSMFT Trigger: AGTAAACATAGACCAGAGGAAGAAGTCAAATACGCATTTGCCTCAGAAGAGGCAATGAATCCCTTTGTGGAGGGAAAGGTTCAATATAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506181.5 ENST00000571694.5 |
||
| CDS CCA 90 bp | GCACATAACCTAATTCTAGCTTCCTCTATGGAAGCTGGAAGTATGTaGGGAAGCAGAAGTGATAATCAACTTCATCTACACACTGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: AHNLILASSMEAGSM*GSRSDNQLHLHTEK Trigger: TTTCTCAGTGTGTAGATGAAGTTGATTATCACTTCTGCTTCCCCACATACTTCCAGCTTCCATAGAGGAAGCTAGAATTAGGTTATGTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000512584.5 ENST00000576270.5 |
||
| CDS TCA 90 bp | GCATCAGTAATTCTCTCCATTTTACGTATGGGGAAATGGAGGTCCTaGGATCTAAGCAACTTGACCAGAGTCACACAATTTATAACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: ASVILSILRMGKWRS*DLSNLTRVTQFITV Trigger: TACTGTTATAAATTGTGTGACTCTGGTCAAGTTGCTTAGATCTCAGGACCTCCATTTCCCCATACGTAAAATGGAGAGAATTACTGATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000512584.5 ENST00000576270.5 |
||
| CDS GCA 90 bp | CAGAATTTCCATGAGTCCAAGGTTTATTTGTTCAAACCTGAATACTaGCAAAGCTTTTCTGTCGAAGGATTAAGTTTGTTCTCCCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: QNFHESKVYLFKPEY*QSFSVEGLSLFSPF Trigger: AAAAGGGGAGAACAAACTTAATCCTTCGACAGAAAAGCTTTGGCAGTATTCAGGTTTGAACAAATAAACCTTGGACTCATGGAAATTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000512584.5 ENST00000576270.5 |
||
| CDS CCA 90 bp | CTTCAGTTGATTCATTTGCAAAATGATCAGTTACCCACCTACAATTaGAAACCTATGATTCAAAACCTTAAGACTTACAGCAGTATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LQLIHLQNDQLPTYN*KPMIQNLKTYSSMV Trigger: TACCATACTGCTGTAAGTCTTAAGGTTTTGAATCATAGGTTTCCAATTGTAGGTGGGTAACTGATCATTTTGCAAATGAATCAACTGAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000512584.5 ENST00000576270.5 |
||
| CDS GCA 72 bp | GGTAGTGATAGCCTGAGGAACCACCGGTGCCAGCTTTaGTGCCCAGCATTCTGTGCACCATGCACACATGGT | + |
|
Preference number: 6 (lower is better) Translates to: GSDSLRNHRCQL*CPAFCAPCTHG Trigger: ACCATGTGTGCATGGTGCACAGAATGCTGGGCAGCAAAGCTGGCACCGGTGGTTCCTCAGGCTATCACTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000510293.1 ENST00000512584.5 ENST00000536354.3 ENST00000573403.1 ENST00000573999.1 ENST00000576270.5 |
||
| CDS GCA 72 bp | TTGATCGCAGGTAGTGATAGCCTGAGGAACCACCGGTaGCAGCTTTGCTGCCCAGCATTCTGTGCACCATGC | + |
|
Preference number: 6 (lower is better) Translates to: LIAGSDSLRNHR*QLCCPAFCAPC Trigger: GCATGGTGCACAGAATGCTGGGCAGCAAAGCTGGCACCGGTGGTTCCTCAGGCTATCACTACCTGCGATCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000510293.1 ENST00000512584.5 ENST00000536354.3 ENST00000573403.1 ENST00000573999.1 ENST00000576270.5 |
||
| CDS TCA 72 bp | AGCTGTGGTCCTGGCTGCTGCCCGATACTAGCAAGTTaGGTCAGCAGATGGATTGCAGTGTGGGTGAGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: SCGPGCCPILAS*VSRWIAVWVSY Trigger: GTAGCTCACCCACACTGCAATCCATCTGCTGACTCAACTTGCTAGTATCGGGCAGCAGCCAGGACCACAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503634.5 ENST00000570498.5 |
||
| CDS CCA 72 bp | GAAAAGGTCACAAAGGAGCTGGAGGAGCTGTGGTCCTaGCTGCTGCCCGATACTAGCAAGTTGAGTCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EKVTKELEELWS*LLPDTSKLSQQ Trigger: CTGCTGACTCAACTTGCTAGTATCGGGCAGCAGCCAGGACCACAGCTCCTCCAGCTCCTTTGTGACCTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000503634.5 ENST00000506072.5 ENST00000506181.5 ENST00000570498.5 ENST00000571694.5 ENST00000574434.5 |
||
| CDS CAA 72 bp | GAGCTGTGGTCCTGGCTGCTGCCCGATACTAGCAAGTaGAGTCAGCAGATGGATTGCAGTGTGGGTGAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: ELWSWLLPDTSK*SQQMDCSVGEL Trigger: TAGCTCACCCACACTGCAATCCATCTGCTGACTCAACTTGCTAGTATCGGGCAGCAGCCAGGACCACAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503634.5 ENST00000570498.5 |
||
| CDS GCA 72 bp | GAACCACCGGTGCCAGCTTTGCTGCCCAGCATTCTGTaGACCATGCACACATGGTTATATCTCCATTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: EPPVPALLPSIL*TMHTWLYLHLV Trigger: GACCAAATGGAGATATAACCATGTGTGCATGGTGCACAGAATGCTGGGCAGCAAAGCTGGCACCGGTGGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000510293.1 ENST00000512584.5 ENST00000536354.3 ENST00000573403.1 ENST00000573999.1 ENST00000576270.5 |
||
| CDS GCA 72 bp | TGCTGCACCAGCAGTTTCAGGATCACTGACACTCGGTaGATCCGAGAAACAACCTTAAGCATGTTCCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CCTSSFRITDTR*IRETTLSMFLS Trigger: TGAAAGGAACATGCTTAAGGTTGTTTCTCGGATGCACCGAGTGTCAGTGATCCTGAAACTGCTGGTGCAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000506072.5 ENST00000507590.5 ENST00000512584.5 ENST00000536354.3 ENST00000573403.1 ENST00000573644.5 ENST00000574434.5 ENST00000576270.5 |
||
| CDS TCA 72 bp | AAGACCTCCTTTGCTGGCTCTATTCACACCAGTTTGTaGTTTGTCTTCTTCGCTGCCTTCTACGGGGAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: KTSFAGSIHTSL*FVFFAAFYGEF Trigger: AAACTCCCCGTAGAAGGCAGCGAAGAAGACAAATCACAAACTGGTGTGAATAGAGCCAGCAAAGGAGGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000503634.5 ENST00000506072.5 ENST00000507590.5 ENST00000509738.1 ENST00000536354.3 ENST00000570498.5 ENST00000573403.1 ENST00000573644.5 ENST00000574434.5 ENST00000576687.1 |
||
| CDS TCA 72 bp | AATGGAAAACTGCTGCACCAGCAGTTTCAGGATCACTaGCACTCGGTGCATCCGAGAAACAACCTTAAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: NGKLLHQQFQDH*HSVHPRNNLKH Trigger: ATGCTTAAGGTTGTTTCTCGGATGCACCGAGTGTCAGTGATCCTGAAACTGCTGGTGCAGCAGTTTTCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000506072.5 ENST00000507590.5 ENST00000512584.5 ENST00000536354.3 ENST00000573403.1 ENST00000573644.5 ENST00000574434.5 ENST00000576270.5 |
||
| CDS CAA 90 bp | TATCCTAACACTCACTATATTCCAGGCAGGTGTCTAACCCAGTATTaGAAGAAGCTGAAGGAAAAGGTCACAAAGGAGCTGGAGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: YPNTHYIPGRCLTQY*KKLKEKVTKELEEL Trigger: CAGCTCCTCCAGCTCCTTTGTGACCTTTTCCTTCAGCTTCTTCAAATACTGGGTTAGACACCTGCCTGGAATATAGTGAGTGTTAGGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000503634.5 ENST00000506072.5 ENST00000506181.5 ENST00000570498.5 ENST00000571694.5 ENST00000574434.5 |
||
| CDS TCA 72 bp | AACCTTTCCCTCCACAAAGGGATTCATTGCCTCTTCTaGGGCAAATGCGTATTTGACTTCTTCCTCTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: NLSLHKGIHCLF*GKCVFDFFLWS Trigger: AGACCAGAGGAAGAAGTCAAATACGCATTTGCCTCAGAAGAGGCAATGAATCCCTTTGTGGAGGGAAAGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506181.5 ENST00000571694.5 |
||
| CDS CAA 90 bp | ATATCTAACACTCACTATATTCCAGGCAGGTGTCTAACCCAGTATTaGAAGAAGCTGAAGGAAAAGGTCACAAAGGAGCTGGAGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ISNTHYIPGRCLTQY*KKLKEKVTKELEEL Trigger: CAGCTCCTCCAGCTCCTTTGTGACCTTTTCCTTCAGCTTCTTCAAATACTGGGTTAGACACCTGCCTGGAATATAGTGAGTGTTAGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000507590.5 ENST00000573644.5 |
||
| CDS CAA 72 bp | ACTCACTATATTCCAGGCAGGTGTCTAACCCAGTATTaGAAGAAGCTGAAGGAAAAGGTCACAAAGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: THYIPGRCLTQY*KKLKEKVTKEL Trigger: CAGCTCCTTTGTGACCTTTTCCTTCAGCTTCTTCAAATACTGGGTTAGACACCTGCCTGGAATATAGTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000503634.5 ENST00000506072.5 ENST00000506181.5 ENST00000507590.5 ENST00000570498.5 ENST00000571694.5 ENST00000573644.5 ENST00000574434.5 |
||
| CDS CAA 90 bp | CCCTCCACAAAGGGATTCATTGCCTCTTCTGAGGCAAATGCGTATTaGACTTCTTCCTCTGGTCTATGTTTACTTTATCCTAACACTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PSTKGFIASSEANAY*TSSSGLCLLYPNTH Trigger: GTGAGTGTTAGGATAAAGTAAACATAGACCAGAGGAAGAAGTCAAATACGCATTTGCCTCAGAAGAGGCAATGAATCCCTTTGTGGAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506181.5 ENST00000571694.5 |
||
| CDS TCA 72 bp | GACAGCCGTCTTTCACCTTTACTAAGGAGATGTTCATaGCGTTTCTCATCAAATAAGGACAGTAGCACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: DSRLSPLLRRCS*RFSSNKDSSTS Trigger: AGAGGTGCTACTGTCCTTATTTGATGAGAAACGTCATGAACATCTCCTTAGTAAAGGTGAAAGACGGCTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000510293.1 ENST00000512584.5 ENST00000536354.3 ENST00000573403.1 ENST00000573999.1 ENST00000576270.5 |
||
| CDS TCA 72 bp | ACATGTTGGAAGAAGCATAGTTGGAATCAATCTATCTaGAGTGACGGGCTGTGTCAATTGGGGCAAAACCAT | + |
|
Preference number: 6 (lower is better) Translates to: TCWKKHSWNQSI*SDGLCQLGQNH Trigger: ATGGTTTTGCCCCAATTGACACAGCCCGTCACTTCAGATAGATTGATTCCAACTATGCTTCTTCCAACATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000512584.5 ENST00000576270.5 |
||
| CDS CAA 72 bp | CTCTGGCAACTGAATGTGGCTGAGGCAAATGCGTATTaGACTTCTTCCTCTGGTCTATGTTTACTTTATCCT | + |
|
Preference number: 6 (lower is better) Translates to: LWQLNVAEANAY*TSSSGLCLLYP Trigger: AGGATAAAGTAAACATAGACCAGAGGAAGAAGTCAAATACGCATTTGCCTCAGCCACATTCAGTTGCCAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503634.5 ENST00000570498.5 |
||
| CDS CAA 90 bp | ATACCATTGCTGCCATTTGACAGAAAAGGTATAAGACTAAGAAACTaGGCTAAAGTTGTGCAGGTTATAAGAGGCGAGGAATGGACCGGA | + |
|
Preference number: 6 (lower is better) Translates to: IPLLPFDRKGIRLRN*AKVVQVIRGEEWTG Trigger: TCCGGTCCATTCCTCGCCTCTTATAACCTGCACAACTTTAGCCAAGTTTCTTAGTCTTATACCTTTTCTGTCAAATGGCAGCAATGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506181.5 ENST00000571694.5 |
||
| CDS TCA 72 bp | ATTCTCTCCATTTTACGTATGGGGAAATGGAGGTCCTaGGATCTAAGCAACTTGACCAGAGTCACACAATTT | + |
|
Preference number: 6 (lower is better) Translates to: ILSILRMGKWRS*DLSNLTRVTQF Trigger: AAATTGTGTGACTCTGGTCAAGTTGCTTAGATCTCAGGACCTCCATTTCCCCATACGTAAAATGGAGAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000512584.5 ENST00000576270.5 |
||
| CDS CCA 72 bp | CCTATCTTGTTTTCTAATAGTCGGAATTGCAAACTCTaGAAGCCTGATGCTGGAGATAAGTACTCTCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PILFSNSRNCKL*KPDAGDKYSLK Trigger: CTTCAGAGAGTACTTATCTCCAGCATCAGGCTTCCAGAGTTTGCAATTCCGACTATTAGAAAACAAGATAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000506072.5 ENST00000536354.3 ENST00000573403.1 ENST00000574434.5 |
||
| CDS CAA 72 bp | CACAGTATTCTGCTGTATATAGAAATTTGTGAATGGTaGGGTTCATCTTCGGTATCCAGTGTCGGGGAATCA | + |
|
Preference number: 6 (lower is better) Translates to: HSILLYIEICEW*GSSSVSSVGES Trigger: TGATTCCCCGACACTGGATACCGAAGATGAACCCAACCATTCACAAATTTCTATATACAGCAGAATACTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000512584.5 ENST00000536354.3 ENST00000573403.1 ENST00000576270.5 |
||
| CDS CAA 90 bp | TCTTGTTGCACATGGCGATTAATGATTAGTGATTTCAGTCACTCCTaGCCATTTACTCTCAGTTCTCTTGTTCTCTCTCACTTGGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: SCCTWRLMISDFSHS*PFTLSSLVLSHLVT Trigger: TGTGACCAAGTGAGAGAGAACAAGAGAACTGAGAGTAAATGGCAAGGAGTGACTGAAATCACTAATCATTAATCGCCATGTGCAACAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503634.5 ENST00000570498.5 |
||
| CDS CAA 90 bp | GCCATTCTGAAAGATCTCTCGAACAGAATCCAACTCCCAGAGGATTaGCTTAAACCAGAGTTCATAAGCTGTAATAAGGAAATCATTGTC | + |
|
Preference number: 6 (lower is better) Translates to: AILKDLSNRIQLPED*LKPEFISCNKEIIV Trigger: GACAATGATTTCCTTATTACAGCTTATGAACTCTGGTTTAAGCAAATCCTCTGGGAGTTGGATTCTGTTCGAGAGATCTTTCAGAATGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000512584.5 ENST00000576270.5 |
||
| CDS TCA 72 bp | AGGGATTCATTGCCTCTTCTGAGGCAAATGCGTATTTaGCTTCTTCCTCTGGTCTATGTTTACTTTATCCTA | + |
|
Preference number: 6 (lower is better) Translates to: RDSLPLLRQMRI*LLPLVYVYFIL Trigger: TAGGATAAAGTAAACATAGACCAGAGGAAGAAGTCAAATACGCATTTGCCTCAGAAGAGGCAATGAATCCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506181.5 ENST00000571694.5 |
||
| CDS TCA 72 bp | AAAATATATCATCAATGCTCCCTGAAGTGCTCTGTATaGCAGCCGTCTTTCACCTTTACTAAGGAGATGTTC | + |
|
Preference number: 6 (lower is better) Translates to: KIYHQCSLKCSV*QPSFTFTKEMF Trigger: GAACATCTCCTTAGTAAAGGTGAAAGACGGCTGTCATACAGAGCACTTCAGGGAGCATTGATGATATATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000510293.1 ENST00000512584.5 ENST00000536354.3 ENST00000573403.1 ENST00000573999.1 ENST00000576270.5 |
||
| CDS CAA 72 bp | ACATGGCGATTAATGATTAGTGATTTCAGTCACTCCTaGCCATTTACTCTCAGTTCTCTTGTTCTCTCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: TWRLMISDFSHS*PFTLSSLVLSH Trigger: GTGAGAGAGAACAAGAGAACTGAGAGTAAATGGCAAGGAGTGACTGAAATCACTAATCATTAATCGCCATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503634.5 ENST00000570498.5 |
||
| CDS CAA 72 bp | AAGGGATTCATTGCCTCTTCTGAGGCAAATGCGTATTaGACTTCTTCCTCTGGTCTATGTTTACTTTATCCT | + |
|
Preference number: 6 (lower is better) Translates to: KGFIASSEANAY*TSSSGLCLLYP Trigger: AGGATAAAGTAAACATAGACCAGAGGAAGAAGTCAAATACGCATTTGCCTCAGAAGAGGCAATGAATCCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506181.5 ENST00000571694.5 |
||
| CDS CAA 90 bp | GCCATTCTGAAAGATCTCTCGAACAGAATCCAACTCCCAGAGGATTaGCTTAAACCAGAGTTCATAAGCTTGATGAGTTATGATAAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: AILKDLSNRIQLPED*LKPEFISLMSYDKK Trigger: CTTTTTATCATAACTCATCAAGCTTATGAACTCTGGTTTAAGCAAATCCTCTGGGAGTTGGATTCTGTTCGAGAGATCTTTCAGAATGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000506072.5 ENST00000507590.5 ENST00000536354.3 ENST00000573403.1 ENST00000573644.5 ENST00000574434.5 |
||
| CDS CAA 72 bp | AAAGATCTCTCGAACAGAATCCAACTCCCAGAGGATTaGCTTAAACCAGAGTTCATAAGCTTGATGAGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: KDLSNRIQLPED*LKPEFISLMSY Trigger: ATAACTCATCAAGCTTATGAACTCTGGTTTAAGCAAATCCTCTGGGAGTTGGATTCTGTTCGAGAGATCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000506072.5 ENST00000507590.5 ENST00000536354.3 ENST00000573403.1 ENST00000573644.5 ENST00000574434.5 |
||
| CDS GCA 72 bp | CATGAGTCCAAGGTTTATTTGTTCAAACCTGAATACTaGCAAAGCTTTTCTGTCGAAGGATTAAGTTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: HESKVYLFKPEY*QSFSVEGLSLF Trigger: GAACAAACTTAATCCTTCGACAGAAAAGCTTTGGCAGTATTCAGGTTTGAACAAATAAACCTTGGACTCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000512584.5 ENST00000576270.5 |
||
| CDS CAA 72 bp | CCTAATTTATGCTACCATACCATGATTCTTCTCCTATaGATATTGCCTCGGTATAAGCCACCCATAAAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: PNLCYHTMILLL*ILPRYKPPIKV Trigger: TACTTTTATGGGTGGCTTATACCGAGGCAATATCAATAGGAGAAGAATCATGGTATGGTAGCATAAATTAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000512584.5 ENST00000576270.5 |
||
| CDS GCA 72 bp | GTTGCATGTTTATTATGTGCTATACCTCGGGCTAAATaGTTGATGCACATTATCTTATTTATCTTCCTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: VACLLCAIPRAK*LMHIILFIFLG Trigger: TCCTAGGAAGATAAATAAGATAATGTGCATCAAGCATTTAGCCCGAGGTATAGCACATAATAAACATGCAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000512584.5 ENST00000576270.5 |
||
| CDS CAA 72 bp | GCATGTTTATTATGTGCTATACCTCGGGCTAAATGCTaGATGCACATTATCTTATTTATCTTCCTAGGAACT | + |
|
Preference number: 6 (lower is better) Translates to: ACLLCAIPRAKC*MHIILFIFLGT Trigger: AGTTCCTAGGAAGATAAATAAGATAATGTGCATCAAGCATTTAGCCCGAGGTATAGCACATAATAAACATGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000512584.5 ENST00000576270.5 |
||
| CDS CAA 72 bp | ATCATCTTTCAGAATTTCCATGAGTCCAAGGTTTATTaGTTCAAACCTGAATACTGCCAAAGCTTTTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: IIFQNFHESKVY*FKPEYCQSFSV Trigger: GACAGAAAAGCTTTGGCAGTATTCAGGTTTGAACAAATAAACCTTGGACTCATGGAAATTCTGAAAGATGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000512584.5 ENST00000576270.5 |
||
| CDS CCA 72 bp | ATTCATTTGCAAAATGATCAGTTACCCACCTACAATTaGAAACCTATGATTCAAAACCTTAAGACTTACAGC | + |
|
Preference number: 6 (lower is better) Translates to: IHLQNDQLPTYN*KPMIQNLKTYS Trigger: GCTGTAAGTCTTAAGGTTTTGAATCATAGGTTTCCAATTGTAGGTGGGTAACTGATCATTTTGCAAATGAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000512584.5 ENST00000576270.5 |
||
| CDS CCA 72 bp | GAGTTCATAAGCTGTAATAAGGAAATCATTGTCAGTTaGAAAGTTATGGGAGCCTTTTTGGCCATTATTATA | + |
|
Preference number: 6 (lower is better) Translates to: EFISCNKEIIVS*KVMGAFLAIII Trigger: TATAATAATGGCCAAAAAGGCTCCCATAACTTTCCAACTGACAATGATTTCCTTATTACAGCTTATGAACTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000512584.5 ENST00000576270.5 |
||