RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TCP10L (Homo sapiens)

Ensembl gene IDs: ENSG00000242220

Ensembl transcript IDs: ENST00000300258.8, ENST00000673667.1, ENST00000673699.1, ENST00000673787.1, ENST00000673907.1, ENST00000674032.1, ENST00000674055.1, ENST00000674141.1

Found 285 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTGTGGTCATTTGCTGGCAGCGACGTGAAGATAGAATTCTTTCCTaGCTCAACCAGGGGCACTCTCGTCTCCTCCCCGTGAGACCCGCA +
Preference number: 1 (lower is better)
Translates to: AVVICWQRREDRILS*LNQGHSRLLPVRPA
Trigger: TGCGGGTCTCACGGGGAGGAGACGAGAGTGCCCCTGGTTGAGTCAGGAAAGAATTCTATCTTCACGTCGCTGCCAGCAAATGACCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300258.8
3UTR GCA 90 bp AACGCCTTTAAGCGGTTTTCCACCCTGGGTGGGCCAGGTGTTCCTTaGCATCATTCTGGTAAACCCACAACCTTCAGCGTGGGCATCATG +
Preference number: 1 (lower is better)
Translates to: NAFKRFSTLGGPGVP*HHSGKPTTFSVGIM
Trigger: CATGATGCCCACGCTGAAGGTTGTGGGTTTACCAGAATGATGGCAAGGAACACCTGGCCCACCCAGGGTGGAAAACCGCTTAAAGGCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR CCA 90 bp GTGTATCCTTGGATTTGCAGCTATGCTCCTTTCCTCAGACACCGCTaGAGGCCAGGAAGCAGCCTTAGCATTCAGTTACCCGCACGGAGT +
Preference number: 1 (lower is better)
Translates to: VYPWICSYAPFLRHR*RPGSSLSIQLPARS
Trigger: ACTCCGTGCGGGTAACTGAATGCTAAGGCTGCTTCCTGGCCTCCAGCGGTGTCTGAGGAAAGGAGCATAGCTGCAAATCCAAGGATACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR CCA 90 bp GGAAGACGGGCTCTTACTTGGCAGCATGGCTCCTTTGTGTATCCTTaGATTTGCAGCTATGCTCCTTTCCTCAGACACCGCTGGAGGCCA +
Preference number: 1 (lower is better)
Translates to: GRRALTWQHGSFVYP*ICSYAPFLRHRWRP
Trigger: TGGCCTCCAGCGGTGTCTGAGGAAAGGAGCATAGCTGCAAATCCAAGGATACACAAAGGAGCCATGCTGCCAAGTAAGAGCCCGTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR CCA 90 bp CAGGTGTTCCTTGCCATCATTCTGGTAAACCCACAACCTTCAGCGTaGGCATCATGGCCATCACGAACATGTCACAGTGCTGCAGAGATT +
Preference number: 1 (lower is better)
Translates to: QVFLAIILVNPQPSA*ASWPSRTCHSAAEI
Trigger: AATCTCTGCAGCACTGTGACATGTTCGTGATGGCCATGATGCCCACGCTGAAGGTTGTGGGTTTACCAGAATGATGGCAAGGAACACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR TCA 90 bp CCGGAAGTTTTCAGAGGGCTAAGGCTCTGTAAGGGTCTTTGTGGTTaGATTCTTGCCCTTGGTTTATCAGCAGGGAGAAGTGGCAGAGTG +
Preference number: 1 (lower is better)
Translates to: PEVFRGLRLCKGLCG*ILALGLSAGRSGRV
Trigger: CACTCTGCCACTTCTCCCTGCTGATAAACCAAGGGCAAGAATTCAACCACAAAGACCCTTACAGAGCCTTAGCCCTCTGAAAACTTCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR CCA 90 bp GCTACTGTTTGTGGTTTAAGAACGCCTTTAAGCGGTTTTCCACCCTaGGTGGGCCAGGTGTTCCTTGCCATCATTCTGGTAAACCCACAA +
Preference number: 1 (lower is better)
Translates to: ATVCGLRTPLSGFPP*VGQVFLAIILVNPQ
Trigger: TTGTGGGTTTACCAGAATGATGGCAAGGAACACCTGGCCCACCCAGGGTGGAAAACCGCTTAAAGGCGTTCTTAAACCACAAACAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR GCA 90 bp ACCCGCACGGAGTTTCCAGCTTCCTCCCTCTTCAGCCTCAGGGTCTaGATCTTTTCTACATCCACATTCAGCATCTTCTTTACAAAGATC +
Preference number: 1 (lower is better)
Translates to: TRTEFPASSLFSLRV*IFSTSTFSIFFTKI
Trigger: GATCTTTGTAAAGAAGATGCTGAATGTGGATGTAGAAAAGATGCAGACCCTGAGGCTGAAGAGGGAGGAAGCTGGAAACTCCGTGCGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR CCA 90 bp CCTTATGGGAAACAAAGGGATGGGCCAAAACAAAGGGATGGGCTCTaGCTAGATATCCACAGCAGAAACATGTCCTTAAGGCACAGATCG +
Preference number: 1 (lower is better)
Translates to: PYGKQRDGPKQRDGL*LDIHSRNMSLRHRS
Trigger: CGATCTGTGCCTTAAGGACATGTTTCTGCTGTGGATATCTAGCCAGAGCCCATCCCTTTGTTTTGGCCCATCCCTTTGTTTCCCATAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR TCA 90 bp AGACTGATTAACCATTGCTGGGAACCTAGTGGGCCTGTTTGGAGGTaGGGGGACACTGGCTTTCTGAATTGCCAGAGTTCTTATTCTGAT +
Preference number: 1 (lower is better)
Translates to: RLINHCWEPSGPVWR*GDTGFLNCQSSYSD
Trigger: ATCAGAATAAGAACTCTGGCAATTCAGAAAGCCAGTGTCCCCTCACCTCCAAACAGGCCCACTAGGTTCCCAGCAATGGTTAATCAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR GCA 90 bp GGCTTCTTAGTCTTTCAACTCTTGAATCATTTTACTGAATTGCTTTaGATCCTTGGATTGAGTTTCAACTTTCTCTTGGTCTTGATAAGC +
Preference number: 1 (lower is better)
Translates to: GFLVFQLLNHFTELL*ILGLSFNFLLVLIS
Trigger: GCTTATCAAGACCAAGAGAAAGTTGAAACTCAATCCAAGGATGCAAAGCAATTCAGTAAAATGATTCAAGAGTTGAAAGACTAAGAAGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR-3UTR CCA 90 bp AGCCCTCAGACTCACGGGTGGAGACAGTGCCACACACATCACCTCCGCAGCCTGGCAGCCGGGAGGACTTaGAATCTGCTCCACAGCAAG +
Preference number: 2 (lower is better)
Translates to: SPQTHGWRQCHTHHLRSLAAGRT*NLLHSK
Trigger: CTTGCTGTGGAGCAGATTCCAAGTCCTCCCGGCTGC...CAGGCTGCGGAGGTGATGTGTGTGGCACTGTCTCCACCCGTGAGTCTGAGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR-3UTR GCA 90 bp CCACCCTGGGTGGGCCAGGTGTTCCTTGCCATCATTCTGGTAAACCCACAACCTCACGGGTGGAGACAGTaGCACACACATCACCTCCGC +
Preference number: 2 (lower is better)
Translates to: PPWVGQVFLAIILVNPQPHGWRQ*HTHHLR
Trigger: GCGGAGGTGATGTGTGTGGCACTGTCTCCACCCGTG...AGGTTGTGGGTTTACCAGAATGATGGCAAGGAACACCTGGCCCACCCAGGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR-3UTR GCA 90 bp TCCACCCTGGGTGGGCCAGGTGTTCCTTGCCATCATTCTGGTAAACCCACAACCCAGCCAGACGCTTGCTaGTGTGAGTGTACTCAGAGG +
Preference number: 2 (lower is better)
Translates to: STLGGPGVPCHHSGKPTTQPDAC*CECTQR
Trigger: CCTCTGAGTACACTCACAGCAGCAAGCGTCTGGCTG...GGTTGTGGGTTTACCAGAATGATGGCAAGGAACACCTGGCCCACCCAGGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR-3UTR GCA 90 bp TATGGCCAGATCTGGGGGCCTATTCCCAACAAGAGACAAAATAGCATCCTGTACGGGAGCACGGGAGGCTaGGAGCCCTCAGACTCACGG +
Preference number: 2 (lower is better)
Translates to: YGQIWGPIPNKRQNSILYGSTGG*EPSDSR
Trigger: CCGTGAGTCTGAGGGCTCGCAGCCTCCCGTGCTCCC...GTACAGGATGCTATTTTGTCTCTTGTTGGGAATAGGCCCCCAGATCTGGCCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR-3UTR TCA 90 bp CTGGGTGGGCCAGGTGTTCCTTGCCATCATTCTGGTAAACCCACAACCTTCAGCAGACGCTTGCTGCTGTaGGTGTACTCAGAGGGAAGC +
Preference number: 2 (lower is better)
Translates to: LGGPGVPCHHSGKPTTFSRRLLL*VYSEGS
Trigger: GCTTCCCTCTGAGTACACTCACAGCAGCAAGCGTCT...GCTGAAGGTTGTGGGTTTACCAGAATGATGGCAAGGAACACCTGGCCCACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR-3UTR CCA 90 bp GAGTGGGAAATCAGGGCACTCACAGCCTTCAGAGCTGAGAGCCGTGAACAGAGACCTCAGACTCACGGGTaGAGACAGTGCCACACACAT +
Preference number: 2 (lower is better)
Translates to: EWEIRALTAFRAESREQRPQTHG*RQCHTH
Trigger: ATGTGTGTGGCACTGTCTCCACCCGTGAGTCTGAGG...TCTCTGTTCACGGCTCTCAGCTCTGAAGGCTGTGAGTGCCCTGATTTCCCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR-3UTR CCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAAGGCCATGAAACAGCCTaGGGGTGGGCAGGAAGCCCG +
Preference number: 2 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKGHETA*GWAGSP
Trigger: CGGGCTTCCTGCCCACCCCCAGGCTGTTTCATGGCC...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300258.8
3UTR-3UTR CCA 90 bp AGACGGGCTCTTACTTGGCAGCATGGCTCCTTTGTGTATCCTTGGATTTGCAGCTTCCTCAGACACCGCTaGAGGCCAGGAAGCAGCCTT +
Preference number: 2 (lower is better)
Translates to: RRALTWQHGSFVYPWICSFLRHR*RPGSSL
Trigger: AAGGCTGCTTCCTGGCCTCCAGCGGTGTCTGAGGAA...GCTGCAAATCCAAGGATACACAAAGGAGCCATGCTGCCAAGTAAGAGCCCGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR-3UTR TCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAAGGCCACGGGCCATTGTaGAGGAGCACCACAGGCTTC +
Preference number: 2 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKGHGPL*RSTTGF
Trigger: GAAGCCTGTGGTGCTCCTTCACAATGGCCCGTGGCC...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300258.8
3UTR-3UTR TCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAAGCACTGTCTTGGCCCTaGAGCTGCTCACAGTCCCGC +
Preference number: 2 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKALSWP*SCSQSR
Trigger: GCGGGACTGTGAGCAGCTTCAGGGCCAAGACAGTGC...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300258.8
3UTR-3UTR CCA 90 bp GGTTTTCCACCCTGGGTGGGCCAGGTGTTCCTTGCCATCATTCTGGTAAACCCAGTTTATGGCCAGATCTaGGGGCCTATTCCCAACAAG +
Preference number: 2 (lower is better)
Translates to: GFPPWVGQVFLAIILVNPVYGQI*GPIPNK
Trigger: CTTGTTGGGAATAGGCCCCCAGATCTGGCCATAAAC...TGGGTTTACCAGAATGATGGCAAGGAACACCTGGCCCACCCAGGGTGGAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR-3UTR CCA 90 bp GAAACAAAGGGATGGGCCAAAACAAAGGGATGGGCTCTGGCTAGATATCCACAGAGCGGTTTTCCACCCTaGGTGGGCCAGGTGTTCCTT +
Preference number: 2 (lower is better)
Translates to: ETKGWAKTKGWALARYPQSGFPP*VGQVFL
Trigger: AAGGAACACCTGGCCCACCCAGGGTGGAAAACCGCT...CTGTGGATATCTAGCCAGAGCCCATCCCTTTGTTTTGGCCCATCCCTTTGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR CAA 90 bp TGGGCATCATGGCCATCACGAACATGTCACAGTGCTGCAGAGATTTaGTTTGTGGCCAGTTTTGGGGCCAGTTTATGGCCAGATCTGGGG +
Preference number: 2 (lower is better)
Translates to: WASWPSRTCHSAAEI*FVASFGASLWPDLG
Trigger: CCCCAGATCTGGCCATAAACTGGCCCCAAAACTGGCCACAAACAAAATCTCTGCAGCACTGTGACATGTTCGTGATGGCCATGATGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR-3UTR GCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAACAGCCACACGCCTTCTaGTGGGAGTGTGCTCAGAGG +
Preference number: 2 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKQPHAF*WECAQR
Trigger: CCTCTGAGCACACTCCCAGCAGAAGGCGTGTGGCTG...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300258.8
3UTR-3UTR TCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAAGGCAAGTCTCACAGGTaGGGACCCAACGAGGGAATC +
Preference number: 2 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKGKSHR*GPNEGI
Trigger: GATTCCCTCGTTGGGTCCTCACCTGTGAGACTTGCC...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300258.8
3UTR-3UTR TCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAACACCAGCAAGTACACTaGAGTCTTGTCCGGGGGCCT +
Preference number: 2 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKHQQVH*SLVRGP
Trigger: AGGCCCCCGGACAAGACTTCAGTGTACTTGCTGGTG...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300258.8
3UTR-3UTR CCA 90 bp GAAACAAAGGGATGGGCCAAAACAAAGGGATGGGCTCTGGCTAGATATCCACAGTTTGGGGCCAGTTTATaGCCAGATCTGGGGGCCTAT +
Preference number: 2 (lower is better)
Translates to: ETKGWAKTKGWALARYPQFGASL*PDLGAY
Trigger: ATAGGCCCCCAGATCTGGCCATAAACTGGCCCCAAA...CTGTGGATATCTAGCCAGAGCCCATCCCTTTGTTTTGGCCCATCCCTTTGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR-3UTR TCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAAAAAGCCGAATCCCTGTaGCACTGGCTTACGGGACCT +
Preference number: 2 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKKAESL*HWLTGP
Trigger: AGGTCCCGTAAGCCAGTGTCACAGGGATTCGGCTTT...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300258.8
3UTR-3UTR GCA 90 bp AGACGGGCTCTTACTTGGCAGCATGGCTCCTTTGTGTATCCTTGGATTTGCAGCAATTTCCTGCAGCTCTaGAATGTTTGGGGAAGAAGC +
Preference number: 2 (lower is better)
Translates to: RRALTWQHGSFVYPWICSNFLQL*NVWGRS
Trigger: GCTTCTTCCCCAAACATTGCAGAGCTGCAGGAAATT...GCTGCAAATCCAAGGATACACAAAGGAGCCATGCTGCCAAGTAAGAGCCCGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR-3UTR TCA 90 bp GAGTGGGAAATCAGGGCACTCACAGCCTTCAGAGCTGAGAGCCGTGAACAGAGATACCCACATATTTATTaGCAGCAAGCCAGTGATAAA +
Preference number: 2 (lower is better)
Translates to: EWEIRALTAFRAESREQRYPHIY*QQASDK
Trigger: TTTATCACTGGCTTGCTGTCAATAAATATGTGGGTA...TCTCTGTTCACGGCTCTCAGCTCTGAAGGCTGTGAGTGCCCTGATTTCCCACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR-3UTR GCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAAATGATGCCTGGAGGTTaGGGAGATACTAGCAGGTGT +
Preference number: 2 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKMMPGG*GDTSRC
Trigger: ACACCTGCTAGTATCTCCGCAACCTCCAGGCATCAT...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300258.8
3UTR-3UTR TCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAAGATAGAATTCTTTCCTaGCTCAACCAGGGGCACTCT +
Preference number: 2 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKDRILS*LNQGHS
Trigger: AGAGTGCCCCTGGTTGAGTCAGGAAAGAATTCTATC...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300258.8
3UTR-3UTR GCA 90 bp AGCCGTGAACAGAGATTTACCCACATATTTATTGACAGCAAGCCAGTGATAAATATCACCTCCGCAGCCTaGACCCACGGAAACAAAGCC +
Preference number: 2 (lower is better)
Translates to: SREQRFTHIFIDSKPVINITSAA*THGNKA
Trigger: GGCTTTGTTTCCGTGGGTGCAGGCTGCGGAGGTGAT...ATTTATCACTGGCTTGCTGTCAATAAATATGTGGGTAAATCTCTGTTCACGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR-3UTR GCA 90 bp AGCCGTGAACAGAGATTTACCCACATATTTATTGACAGCAAGCCAGTGATAAATGGGCCAGGTGTTCCTTaGCATCATTCTGGTAAACCC +
Preference number: 2 (lower is better)
Translates to: SREQRFTHIFIDSKPVINGPGVP*HHSGKP
Trigger: GGGTTTACCAGAATGATGGCAAGGAACACCTGGCCC...ATTTATCACTGGCTTGCTGTCAATAAATATGTGGGTAAATCTCTGTTCACGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR-3UTR TCA 90 bp CTTTCTCTTGGTCTTGATAAGCTTCCTAGCCATCCAGATTCTGAATTCTATGTCCTGGTAGATAGTGCTTaGGAGCAATGGATGGAAGAC +
Preference number: 2 (lower is better)
Translates to: LSLGLDKLPSHPDSEFYVLVDSA*EQWMED
Trigger: GTCTTCCATCCATTGCTCTCAAGCACTATCTACCAG...GACATAGAATTCAGAATCTGGATGGCTAGGAAGCTTATCAAGACCAAGAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR-3UTR GCA 90 bp TATGTCTGCCATTTCAGACATTTCAGACTGATTAACCATTGCTGGGAACCTAGTACAGCCCAAATTTCCTaGAGCTCTGCAATGTTTGGG +
Preference number: 2 (lower is better)
Translates to: YVCHFRHFRLINHCWEPSTAQIS*SSAMFG
Trigger: CCCAAACATTGCAGAGCTGCAGGAAATTTGGGCTGT...ACTAGGTTCCCAGCAATGGTTAATCAGTCTGAAATGTCTGAAATGGCAGACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR-3UTR GCA 90 bp GATGGAAGACGGGCTCTTACTTGGCAGCATGGCTCCTTTGTGTATCCTTGGATTTTACAAAGATCTGTCTaGTTGTTAAGAAACTGCACA +
Preference number: 2 (lower is better)
Translates to: DGRRALTWQHGSFVYPWILQRSV*LLRNCT
Trigger: TGTGCAGTTTCTTAACAAGCAGACAGATCTTTGTAA...AATCCAAGGATACACAAAGGAGCCATGCTGCCAAGTAAGAGCCCGTCTTCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR-3UTR GCA 90 bp CTTACTTGGCAGCATGGCTCCTTTGTGTATCCTTGGATTTGCAGCTATGCTCCTTGTCGTCTGAGCATTTaGATAATAGTAAACATCACA +
Preference number: 2 (lower is better)
Translates to: LTWQHGSFVYPWICSYAPCRLSI*IIVNIT
Trigger: TGTGATGTTTACTATTATGCAAATGCTCAGACGACA...AGGAGCATAGCTGCAAATCCAAGGATACACAAAGGAGCCATGCTGCCAAGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR-3UTR GCA 90 bp TATGTCTGCCATTTCAGACATTTCAGACTGATTAACCATTGCTGGGAACCTAGTGTGTATCCTTGGATTTaGAGCTATGCTCCTTTCCTC +
Preference number: 2 (lower is better)
Translates to: YVCHFRHFRLINHCWEPSVYPWI*SYAPFL
Trigger: GAGGAAAGGAGCATAGCTGCAAATCCAAGGATACAC...ACTAGGTTCCCAGCAATGGTTAATCAGTCTGAAATGTCTGAAATGGCAGACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR-3UTR GCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAAACTGGCTTTCTGAATTaGCAGAGTTCTTATTCTGAT +
Preference number: 2 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKTGFLN*QSSYSD
Trigger: ATCAGAATAAGAACTCTGGCAATTCAGAAAGCCAGT...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR CAA 90 bp GAATTGCTTTGCATCCTTGGATTGAGTTTCAACTTTCTCTTGGTCTaGATAAGCTTCCTAGCCATCCAGATTCTGAATTCTATGTCTGCC +
Preference number: 2 (lower is better)
Translates to: ELLCILGLSFNFLLV*ISFLAIQILNSMSA
Trigger: GGCAGACATAGAATTCAGAATCTGGATGGCTAGGAAGCTTATCAAGACCAAGAGAAAGTTGAAACTCAATCCAAGGATGCAAAGCAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR-3UTR CCA 90 bp CAACTCTTGAATCATTTTACTGAATTGCTTTGCATCCTTGGATTGAGTTTCAACCTTGAGAGCAATGGATaGAAGACGGGCTCTTACTTG +
Preference number: 2 (lower is better)
Translates to: QLLNHFTELLCILGLSFNLESNG*KTGSYL
Trigger: CAAGTAAGAGCCCGTCTTCCATCCATTGCTCTCAAG...GTTGAAACTCAATCCAAGGATGCAAAGCAATTCAGTAAAATGATTCAAGAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR-3UTR GCA 90 bp AGCCGTGAACAGAGATTTACCCACATATTTATTGACAGCAAGCCAGTGATAAATACGAACATGTCACAGTaGTGCAGAGATTTTGTTTGT +
Preference number: 2 (lower is better)
Translates to: SREQRFTHIFIDSKPVINTNMSQ*CRDFVC
Trigger: ACAAACAAAATCTCTGCAGCACTGTGACATGTTCGT...ATTTATCACTGGCTTGCTGTCAATAAATATGTGGGTAAATCTCTGTTCACGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR CAA 90 bp TTTACTGAATTGCTTTGCATCCTTGGATTGAGTTTCAACTTTCTCTaGGTCTTGATAAGCTTCCTAGCCATCCAGATTCTGAATTCTATG +
Preference number: 2 (lower is better)
Translates to: FTELLCILGLSFNFL*VLISFLAIQILNSM
Trigger: CATAGAATTCAGAATCTGGATGGCTAGGAAGCTTATCAAGACCAAGAGAAAGTTGAAACTCAATCCAAGGATGCAAAGCAATTCAGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR-3UTR CCA 90 bp CAACTCTTGAATCATTTTACTGAATTGCTTTGCATCCTTGGATTGAGTTTCAACTTGAATTCTTGCCCTTaGTTTATCAGCAGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: QLLNHFTELLCILGLSFNLNSCP*FISREK
Trigger: CTTCTCCCTGCTGATAAACCAAGGGCAAGAATTCAA...GTTGAAACTCAATCCAAGGATGCAAAGCAATTCAGTAAAATGATTCAAGAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR CAA 90 bp TTTCAACTCTTGAATCATTTTACTGAATTGCTTTGCATCCTTGGATaGAGTTTCAACTTTCTCTTGGTCTTGATAAGCTTCCTAGCCATC +
Preference number: 2 (lower is better)
Translates to: FQLLNHFTELLCILG*SFNFLLVLISFLAI
Trigger: GATGGCTAGGAAGCTTATCAAGACCAAGAGAAAGTTGAAACTCAATCCAAGGATGCAAAGCAATTCAGTAAAATGATTCAAGAGTTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR TCA 72 bp ATGCCTGGAGGTTGCGGAGATACTAGCAGGTGTGTGTaGGAGGCAAGGTCCCCCATTCTGCCCGGCACCAGC +
Preference number: 3 (lower is better)
Translates to: MPGGCGDTSRCV*EARSPILPGTS
Trigger: GCTGGTGCCGGGCAGAATGGGGGACCTTGCCTCTCACACACACCTGCTAGTATCTCCGCAACCTCCAGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300258.8
3UTR GCA 72 bp AAGCGGTTTTCCACCCTGGGTGGGCCAGGTGTTCCTTaGCATCATTCTGGTAAACCCACAACCTTCAGCGTG +
Preference number: 3 (lower is better)
Translates to: KRFSTLGGPGVP*HHSGKPTTFSV
Trigger: CACGCTGAAGGTTGTGGGTTTACCAGAATGATGGCAAGGAACACCTGGCCCACCCAGGGTGGAAAACCGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR TCA 72 bp ATTTGCTGGCAGCGACGTGAAGATAGAATTCTTTCCTaGCTCAACCAGGGGCACTCTCGTCTCCTCCCCGTG +
Preference number: 3 (lower is better)
Translates to: ICWQRREDRILS*LNQGHSRLLPV
Trigger: CACGGGGAGGAGACGAGAGTGCCCCTGGTTGAGTCAGGAAAGAATTCTATCTTCACGTCGCTGCCAGCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300258.8
3UTR GCA 72 bp GCATGGCTCCTTTGTGTATCCTTGGATTTGCAGCTATaGTCCTTTCCTCAGACACCGCTGGAGGCCAGGAAG +
Preference number: 3 (lower is better)
Translates to: AWLLCVSLDLQL*SFPQTPLEARK
Trigger: CTTCCTGGCCTCCAGCGGTGTCTGAGGAAAGGAGCATAGCTGCAAATCCAAGGATACACAAAGGAGCCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR CCA 72 bp TGGATTTGCAGCTATGCTCCTTTCCTCAGACACCGCTaGAGGCCAGGAAGCAGCCTTAGCATTCAGTTACCC +
Preference number: 3 (lower is better)
Translates to: WICSYAPFLRHR*RPGSSLSIQLP
Trigger: GGGTAACTGAATGCTAAGGCTGCTTCCTGGCCTCCAGCGGTGTCTGAGGAAAGGAGCATAGCTGCAAATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR-3UTR CAA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAAGGAGGGCTGGGGGTGTaGGCAAGTCTCACAGGTGAG +
Preference number: 3 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKGGLGV*ASLTGE
Trigger: CTCACCTGTGAGACTTGCCAACACCCCCAGCCCTCC...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300258.8
3UTR-3UTR CAA 90 bp TCCACCCTGGGTGGGCCAGGTGTTCCTTGCCATCATTCTGGTAAACCCACAACCAGTGCTGCAGAGATTTaGTTTGTGGCCAGTTTTGGG +
Preference number: 3 (lower is better)
Translates to: STLGGPGVPCHHSGKPTTSAAEI*FVASFG
Trigger: CCCAAAACTGGCCACAAACAAAATCTCTGCAGCACT...GGTTGTGGGTTTACCAGAATGATGGCAAGGAACACCTGGCCCACCCAGGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR TCA 72 bp AACCATTGCTGGGAACCTAGTGGGCCTGTTTGGAGGTaGGGGGACACTGGCTTTCTGAATTGCCAGAGTTCT +
Preference number: 3 (lower is better)
Translates to: NHCWEPSGPVWR*GDTGFLNCQSS
Trigger: AGAACTCTGGCAATTCAGAAAGCCAGTGTCCCCTCACCTCCAAACAGGCCCACTAGGTTCCCAGCAATGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR GCA 72 bp ACTTGGCAGCATGGCTCCTTTGTGTATCCTTGGATTTaGAGCTATGCTCCTTTCCTCAGACACCGCTGGAGG +
Preference number: 3 (lower is better)
Translates to: TWQHGSFVYPWI*SYAPFLRHRWR
Trigger: CCTCCAGCGGTGTCTGAGGAAAGGAGCATAGCTGCAAATCCAAGGATACACAAAGGAGCCATGCTGCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR-3UTR CAA 90 bp GAAACAAAGGGATGGGCCAAAACAAAGGGATGGGCTCTGGCTAGATATCCACAGCATGTACCCGTGTCCTaGGAAGAACACAGGACTCCA +
Preference number: 3 (lower is better)
Translates to: ETKGWAKTKGWALARYPQHVPVS*EEHRTP
Trigger: TGGAGTCCTGTGTTCTTCCAAGGACACGGGTACATG...CTGTGGATATCTAGCCAGAGCCCATCCCTTTGTTTTGGCCCATCCCTTTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR CCA 72 bp CTTGCCATCATTCTGGTAAACCCACAACCTTCAGCGTaGGCATCATGGCCATCACGAACATGTCACAGTGCT +
Preference number: 3 (lower is better)
Translates to: LAIILVNPQPSA*ASWPSRTCHSA
Trigger: AGCACTGTGACATGTTCGTGATGGCCATGATGCCCACGCTGAAGGTTGTGGGTTTACCAGAATGATGGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR CCA 72 bp TGTGGTTTAAGAACGCCTTTAAGCGGTTTTCCACCCTaGGTGGGCCAGGTGTTCCTTGCCATCATTCTGGTA +
Preference number: 3 (lower is better)
Translates to: CGLRTPLSGFPP*VGQVFLAIILV
Trigger: TACCAGAATGATGGCAAGGAACACCTGGCCCACCCAGGGTGGAAAACCGCTTAAAGGCGTTCTTAAACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR CCA 72 bp AGCAATGGATGGAAGACGGGCTCTTACTTGGCAGCATaGCTCCTTTGTGTATCCTTGGATTTGCAGCTATGC +
Preference number: 3 (lower is better)
Translates to: SNGWKTGSYLAA*LLCVSLDLQLC
Trigger: GCATAGCTGCAAATCCAAGGATACACAAAGGAGCCATGCTGCCAAGTAAGAGCCCGTCTTCCATCCATTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR CCA 72 bp TGCTTGAGAGCAATGGATGGAAGACGGGCTCTTACTTaGCAGCATGGCTCCTTTGTGTATCCTTGGATTTGC +
Preference number: 3 (lower is better)
Translates to: CLRAMDGRRALT*QHGSFVYPWIC
Trigger: GCAAATCCAAGGATACACAAAGGAGCCATGCTGCCAAGTAAGAGCCCGTCTTCCATCCATTGCTCTCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR CCA 72 bp ATTCTGGTAAACCCACAACCTTCAGCGTGGGCATCATaGCCATCACGAACATGTCACAGTGCTGCAGAGATT +
Preference number: 3 (lower is better)
Translates to: ILVNPQPSAWAS*PSRTCHSAAEI
Trigger: AATCTCTGCAGCACTGTGACATGTTCGTGATGGCCATGATGCCCACGCTGAAGGTTGTGGGTTTACCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR CCA 72 bp AAACAAAGGGATGGGCCAAAACAAAGGGATGGGCTCTaGCTAGATATCCACAGCAGAAACATGTCCTTAAGG +
Preference number: 3 (lower is better)
Translates to: KQRDGPKQRDGL*LDIHSRNMSLR
Trigger: CCTTAAGGACATGTTTCTGCTGTGGATATCTAGCCAGAGCCCATCCCTTTGTTTTGGCCCATCCCTTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR-3UTR CAA 90 bp GAACAGAGATTTACCCACATATTTATTGACAGCAAGCCAGTGATAAATTGTTTCCGCTCATGCTACTGTTaGTGGTTTAAGAACGCCTTT +
Preference number: 3 (lower is better)
Translates to: EQRFTHIFIDSKPVINCFRSCYC*WFKNAF
Trigger: AAAGGCGTTCTTAAACCACAAACAGTAGCATGAGCG...GAAACAATTTATCACTGGCTTGCTGTCAATAAATATGTGGGTAAATCTCTGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR TCA 72 bp TGGTCTATTCTGCTGTTAATAGTTCTGCTTGTAGTTTaGAATTCTCGTAGCGAATTTTTCAGTTCAAGAAGT +
Preference number: 3 (lower is better)
Translates to: WSILLLIVLLVV*NSRSEFFSSRS
Trigger: ACTTCTTGAACTGAAAAATTCGCTACGAGAATTTCAAACTACAAGCAGAACTATTAACAGCAGAATAGACCA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR GCA 90 bp TGCGAGCCCTCAGACTCACGGGTGGAGACAGTGCCACACACATCACCTCCGCAGATCACCTCCGCAGCCTaGACCCACGGAAACAAAGCC +
Preference number: 4 (lower is better)
Translates to: CEPSDSRVETVPHTSPPQITSAA*THGNKA
Trigger: GGCTTTGTTTCCGTGGGTGCAGGCTGCGGAGGTGAT...CTGCGGAGGTGATGTGTGTGGCACTGTCTCCACCCGTGAGTCTGAGGGCTCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR GCA 90 bp AGCCCTCAGACTCACGGGTGGAGACAGTGCCACACACATCACCTCCGCAGCCTGCAGCCAGACGCTTGCTaGTGTGAGTGTACTCAGAGG +
Preference number: 4 (lower is better)
Translates to: SPQTHGWRQCHTHHLRSLQPDAC*CECTQR
Trigger: CCTCTGAGTACACTCACAGCAGCAAGCGTCTGGCTG...CAGGCTGCGGAGGTGATGTGTGTGGCACTGTCTCCACCCGTGAGTCTGAGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR GCA 90 bp GAAACAAAGGGATGGGCCAAAACAAAGGGATGGGCTCTGGCTAGATATCCACAGGGGAGCACGGGAGGCTaGGAGCCCTCAGACTCACGG +
Preference number: 4 (lower is better)
Translates to: ETKGWAKTKGWALARYPQGSTGG*EPSDSR
Trigger: CCGTGAGTCTGAGGGCTCGCAGCCTCCCGTGCTCCC...CTGTGGATATCTAGCCAGAGCCCATCCCTTTGTTTTGGCCCATCCCTTTGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR CCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGGGCCATGAAACAGCCTaGGGGTGGGCAGGAAGCCCG +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAEGHETA*GWAGSP
Trigger: CGGGCTTCCTGCCCACCCCCAGGCTGTTTCATGGCC...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR CCA 90 bp GAGTGGGAAATCAGGGCACTCACAGCCTTCAGAGCTGAGAGCCGTGAACAGAGAAGCGGTTTTCCACCCTaGGTGGGCCAGGTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: EWEIRALTAFRAESREQRSGFPP*VGQVFL
Trigger: AAGGAACACCTGGCCCACCCAGGGTGGAAAACCGCT...TCTCTGTTCACGGCTCTCAGCTCTGAAGGCTGTGAGTGCCCTGATTTCCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR TCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGGGCCACGGGCCATTGTaGAGGAGCACCACAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAEGHGPL*RSTTGF
Trigger: GAAGCCTGTGGTGCTCCTTCACAATGGCCCGTGGCC...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR TCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGGCACTGTCTTGGCCCTaGAGCTGCTCACAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAEALSWP*SCSQSR
Trigger: GCGGGACTGTGAGCAGCTTCAGGGCCAAGACAGTGC...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR GCA 90 bp TCCACCCTGGGTGGGCCAGGTGTTCCTTGCCATCATTCTGGTAAACCCACAACCGGGCCAGGTGTTCCTTaGCATCATTCTGGTAAACCC +
Preference number: 4 (lower is better)
Translates to: STLGGPGVPCHHSGKPTTGPGVP*HHSGKP
Trigger: GGGTTTACCAGAATGATGGCAAGGAACACCTGGCCC...GGTTGTGGGTTTACCAGAATGATGGCAAGGAACACCTGGCCCACCCAGGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR CCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGTCCCTCAGGGGAACCTaGCGGGCCACCCTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAESLRGT*RATLAE
Trigger: TTCTGCAAGGGTGGCCCGCCAGGTTCCCCTGAGGGA...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR TCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGCATAAGGGCCACACCTaGAGCTCGGCCACACCTGAG +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAEHKGHT*SSATPE
Trigger: CTCAGGTGTGGCCGAGCTTCAGGTGTGGCCCTTATG...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR TCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGGGCTTACGGGACCTATaGAGGGCCACGGGCCATTGT +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAEGLRDL*RATGHC
Trigger: ACAATGGCCCGTGGCCCTTCATAGGTCCCGTAAGCC...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR GCA 90 bp GGTTTTCCACCCTGGGTGGGCCAGGTGTTCCTTGCCATCATTCTGGTAAACCCATTCCACCGCTGCAGCTaGAGAGCTCTCAGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: GFPPWVGQVFLAIILVNPFHRCS*RALSFS
Trigger: AGAAAAGCTGAGAGCTCTGCAGCTGCAGCGGTGGAA...TGGGTTTACCAGAATGATGGCAAGGAACACCTGGCCCACCCAGGGTGGAAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR GCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGCTGGCTTTCCACCGCTaGAGCTGCAGAGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAELAFHR*SCRALS
Trigger: GCTGAGAGCTCTGCAGCTGCAGCGGTGGAAAGCCAG...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300258.8
ENST00000674141.1
CDS-3UTR GCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGCAGCCACACGCCTTCTaGTGGGAGTGTGCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAEQPHAF*WECAQR
Trigger: CCTCTGAGCACACTCCCAGCAGAAGGCGTGTGGCTG...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR CCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGCCTCTTTGGGGTCCCTaGCCTCGAGTTGACCTGCCA +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAEPLWGP*PRVDLP
Trigger: TGGCAGGTCAACTCGAGGCCAGGGACCCCAAAGAGG...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR CCA 90 bp CCAGCTTCCTCCCTCTTCAGCCTCAGGGTCTGCATCTTTTCTACATCCACATTCTTCCTCAGACACCGCTaGAGGCCAGGAAGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: PASSLFSLRVCIFSTSTFFLRHR*RPGSSL
Trigger: AAGGCTGCTTCCTGGCCTCCAGCGGTGTCTGAGGAA...GAATGTGGATGTAGAAAAGATGCAGACCCTGAGGCTGAAGAGGGAGGAAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR TCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAACTCGTCTCCTCCCCGTaGGACCCGCAATGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKLVSSP*DPQCRK
Trigger: CTTCCTGCATTGCGGGTCTCACGGGGAGGAGACGAG...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR TCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAATGTCAGATTCGGCCCTaGAGGGCCACGCAGACCTCG +
Preference number: 4 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKCQIRP*RATQTS
Trigger: CGAGGTCTGCGTGGCCCTTCAGGGCCGAATCTGACA...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR TCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGCACCAGCAAGTACACTaGAGTCTTGTCCGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAEHQQVH*SLVRGP
Trigger: AGGCCCCCGGACAAGACTTCAGTGTACTTGCTGGTG...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR TCA 90 bp GAAATCAGGGCACTCACAGCCTTCAGAGCTGAGAGCCGTGAACAGAGATTTACCAGACGCTTGCTGCTGTaGGTGTACTCAGAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: EIRALTAFRAESREQRFTRRLLL*VYSEGS
Trigger: GCTTCCCTCTGAGTACACTCACAGCAGCAAGCGTCT...GGTAAATCTCTGTTCACGGCTCTCAGCTCTGAAGGCTGTGAGTGCCCTGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR GCA 90 bp TATGGCCAGATCTGGGGGCCTATTCCCAACAAGAGACAAAATAGCATCCTGTACCTGGCTTTCCACCGCTaGAGCTGCAGAGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: YGQIWGPIPNKRQNSILYLAFHR*SCRALS
Trigger: GCTGAGAGCTCTGCAGCTGCAGCGGTGGAAAGCCAG...GTACAGGATGCTATTTTGTCTCTTGTTGGGAATAGGCCCCCAGATCTGGCCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR GCA 90 bp TCCCTCTTCAGCCTCAGGGTCTGCATCTTTTCTACATCCACATTCAGCATCTTCCTGGCTTTCCACCGCTaGAGCTGCAGAGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: SLFSLRVCIFSTSTFSIFLAFHR*SCRALS
Trigger: GCTGAGAGCTCTGCAGCTGCAGCGGTGGAAAGCCAG...GAAGATGCTGAATGTGGATGTAGAAAAGATGCAGACCCTGAGGCTGAAGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR GCA 90 bp GAGTGGGAAATCAGGGCACTCACAGCCTTCAGAGCTGAGAGCCGTGAACAGAGAAGTCTGATGATCTGCTaGTGTAATGGCTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: EWEIRALTAFRAESREQRSLMIC*CNGWSP
Trigger: TGGGGACCAGCCATTACAGCAGCAGATCATCAGACT...TCTCTGTTCACGGCTCTCAGCTCTGAAGGCTGTGAGTGCCCTGATTTCCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR GCA 90 bp CTGGGTGGGCCAGGTGTTCCTTGCCATCATTCTGGTAAACCCACAACCTTCAGCTGGAGTCTGATGATCTaGTGCTGTAATGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LGGPGVPCHHSGKPTTFSWSLMI*CCNGWS
Trigger: GGACCAGCCATTACAGCAGCAGATCATCAGACTCCA...GCTGAAGGTTGTGGGTTTACCAGAATGATGGCAAGGAACACCTGGCCCACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR GCA 90 bp TATGGCCAGATCTGGGGGCCTATTCCCAACAAGAGACAAAATAGCATCCTGTACCACGGGTGGAGACAGTaGCACACACATCACCTCCGC +
Preference number: 4 (lower is better)
Translates to: YGQIWGPIPNKRQNSILYHGWRQ*HTHHLR
Trigger: GCGGAGGTGATGTGTGTGGCACTGTCTCCACCCGTG...GTACAGGATGCTATTTTGTCTCTTGTTGGGAATAGGCCCCCAGATCTGGCCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR CCA 90 bp ACCTTCAGCGTGGGCATCATGGCCATCACGAACATGTCACAGTGCTGCAGAGATCTGCAGATTTCTTCCTaGCTTTCCACCGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: TFSVGIMAITNMSQCCRDLQISS*LSTAAA
Trigger: AGCTGCAGCGGTGGAAAGCCAGGAAGAAATCTGCAG...ATCTCTGCAGCACTGTGACATGTTCGTGATGGCCATGATGCCCACGCTGAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR CCA 90 bp CTTCAGCGTGGGCATCATGGCCATCACGAACATGTCACAGTGCTGCAGAGATTTCCTCAGACTCACGGGTaGAGACAGTGCCACACACAT +
Preference number: 4 (lower is better)
Translates to: LQRGHHGHHEHVTVLQRFPQTHG*RQCHTH
Trigger: ATGTGTGTGGCACTGTCTCCACCCGTGAGTCTGAGG...AAATCTCTGCAGCACTGTGACATGTTCGTGATGGCCATGATGCCCACGCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR TCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAACATAGCCTGGGGCAATaGCAGTCACAGGCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKHSLGQ*QSQARL
Trigger: AAGGCGGGCCTGTGACTGTCATTGCCCCAGGCTATG...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR TCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAAGCCGAATCCCTGTaGCACTGGCTTACGGGACCT +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAEKAESL*HWLTGP
Trigger: AGGTCCCGTAAGCCAGTGTCACAGGGATTCGGCTTT...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR TCA 90 bp GGAAGCAGCCTTAGCATTCAGTTACCCGCACGGAGTTTCCAGCTTCCTCCCTCTTTGGGGAAGAAGCAGTaGACTCATCAGGTTGAACGT +
Preference number: 4 (lower is better)
Translates to: GSSLSIQLPARSFQLPPSLGKKQ*THQVER
Trigger: ACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAA...AGAGGGAGGAAGCTGGAAACTCCGTGCGGGTAACTGAATGCTAAGGCTGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR GCA 90 bp TTTTCCACCCTGGGTGGGCCAGGTGTTCCTTGCCATCATTCTGGTAAACCCACACCCAACAGTCACTACTaGCAGGATCAGATCATCTGG +
Preference number: 4 (lower is better)
Translates to: FSTLGGPGVPCHHSGKPTPNSHY*QDQIIW
Trigger: CCAGATGATCTGATCCTGGCAGTAGTGACTGTTGGG...TGTGGGTTTACCAGAATGATGGCAAGGAACACCTGGCCCACCCAGGGTGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR GCA 90 bp GGCTCCTTTGTGTATCCTTGGATTTGCAGCTATGCTCCTTTCCTCAGACACCGCTTCCACCGCTGCAGCTaGAGAGCTCTCAGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: GSFVYPWICSYAPFLRHRFHRCS*RALSFS
Trigger: AGAAAAGCTGAGAGCTCTGCAGCTGCAGCGGTGGAA...GCGGTGTCTGAGGAAAGGAGCATAGCTGCAAATCCAAGGATACACAAAGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR GCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAAAGGAGTCCCCAACTCTaGTCACCAGCTCCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKRSPQL*SPAPPA
Trigger: AGCCGGAGGAGCTGGTGAGCAGAGTTGGGGACTCCT...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR GCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGCTCAGCCCACCTACCTaGAGCTCTGCAATGTTTGGG +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAELSPPT*SSAMFG
Trigger: CCCAAACATTGCAGAGCTGCAGGTAGGTGGGCTGAG...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR CCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGGACCTGCCAGCATCCTaGTCCCCAACAGTCACTACT +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAEDLPAS*SPTVTT
Trigger: AGTAGTGACTGTTGGGGACCAGGATGCTGGCAGGTC...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR CCA 90 bp ACCTTCAGCGTGGGCATCATGGCCATCACGAACATGTCACAGTGCTGCAGAGATTGTCTCCCAAGCTCTTaGTGGAGTCTGATGATCTGC +
Preference number: 4 (lower is better)
Translates to: TFSVGIMAITNMSQCCRDCLPSS*WSLMIC
Trigger: GCAGATCATCAGACTCCACCAAGAGCTTGGGAGACA...ATCTCTGCAGCACTGTGACATGTTCGTGATGGCCATGATGCCCACGCTGAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR CCA 90 bp CTTAGCATTCAGTTACCCGCACGGAGTTTCCAGCTTCCTCCCTCTTCAGCCTCATGTCTCCCAAGCTCTTaGTGGAGTCTGATGATCTGC +
Preference number: 4 (lower is better)
Translates to: LSIQLPARSFQLPPSSASCLPSS*WSLMIC
Trigger: GCAGATCATCAGACTCCACCAAGAGCTTGGGAGACA...TGAGGCTGAAGAGGGAGGAAGCTGGAAACTCCGTGCGGGTAACTGAATGCTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR CCA 90 bp AGACGGGCTCTTACTTGGCAGCATGGCTCCTTTGTGTATCCTTGGATTTGCAGCCTGCAGATTTCTTCCTaGCTTTCCACCGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: RRALTWQHGSFVYPWICSLQISS*LSTAAA
Trigger: AGCTGCAGCGGTGGAAAGCCAGGAAGAAATCTGCAG...GCTGCAAATCCAAGGATACACAAAGGAGCCATGCTGCCAAGTAAGAGCCCGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR CCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGCTCTGCACAGGGAGTTaGCCTTCCAGTAGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAELCTGS*PSSRCC
Trigger: GCAACACCTACTGGAAGGCCAACTCCCTGTGCAGAG...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR CCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAAGAGGGCTGGGGGTGTTaGCAAGTCTCACAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKEGWGC*QVSQVR
Trigger: CCTCACCTGTGAGACTTGCCAACACCCCCAGCCCTC...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR CCA 90 bp ACCTTCAGCGTGGGCATCATGGCCATCACGAACATGTCACAGTGCTGCAGAGATGTTTATGGCCAGATCTaGGGGCCTATTCCCAACAAG +
Preference number: 4 (lower is better)
Translates to: TFSVGIMAITNMSQCCRDVYGQI*GPIPNK
Trigger: CTTGTTGGGAATAGGCCCCCAGATCTGGCCATAAAC...ATCTCTGCAGCACTGTGACATGTTCGTGATGGCCATGATGCCCACGCTGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR GCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGTTCCACCGCTGCAGCTaGAGAGCTCTCAGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAEFHRCS*RALSFS
Trigger: AGAAAAGCTGAGAGCTCTGCAGCTGCAGCGGTGGAA...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300258.8
ENST00000674141.1
CDS-3UTR GCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAACAAGGTCCCCCATTCTaGCCGGCACCAGCAAGTACA +
Preference number: 4 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKQGPPF*PAPAST
Trigger: TGTACTTGCTGGTGCCGGGCAGAATGGGGGACCTTG...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR GCA 90 bp CCACCCTGGGTGGGCCAGGTGTTCCTTGCCATCATTCTGGTAAACCCACAACCTAACATGTCACAGTGCTaGAGAGATTTTGTTTGTGGC +
Preference number: 4 (lower is better)
Translates to: PPWVGQVFLAIILVNPQPNMSQC*RDFVCG
Trigger: GCCACAAACAAAATCTCTGCAGCACTGTGACATGTT...AGGTTGTGGGTTTACCAGAATGATGGCAAGGAACACCTGGCCCACCCAGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR CCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGCTGCAGATTTCTTCCTaGCTTTCCACCGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAELQISS*LSTAAA
Trigger: AGCTGCAGCGGTGGAAAGCCAGGAAGAAATCTGCAG...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300258.8
ENST00000674141.1
3UTR CAA 72 bp TACTTGGCAGCATGGCTCCTTTGTGTATCCTTGGATTaGCAGCTATGCTCCTTTCCTCAGACACCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: YLAAWLLCVSLD*QLCSFPQTPLE
Trigger: CTCCAGCGGTGTCTGAGGAAAGGAGCATAGCTGCAAATCCAAGGATACACAAAGGAGCCATGCTGCCAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR CAA 72 bp GGCTCTTACTTGGCAGCATGGCTCCTTTGTGTATCCTaGGATTTGCAGCTATGCTCCTTTCCTCAGACACCG +
Preference number: 4 (lower is better)
Translates to: GSYLAAWLLCVS*DLQLCSFPQTP
Trigger: CGGTGTCTGAGGAAAGGAGCATAGCTGCAAATCCAAGGATACACAAAGGAGCCATGCTGCCAAGTAAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR TCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAAACTAGCAGGTGTGTGTaGGAGGCAAGGTCCCCCATT +
Preference number: 4 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKTSRCV*EARSPI
Trigger: AATGGGGGACCTTGCCTCTCACACACACCTGCTAGT...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR TCA 90 bp TGGAAGACGGGCTCTTACTTGGCAGCATGGCTCCTTTGTGTATCCTTGGATTTGCAGGTTGAACGTGGCTaGGAAATCCACCTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: WKTGSYLAAWLLCVSLDLQVERG*EIHLQN
Trigger: GTTCTGAAGGTGGATTTCTCAGCCACGTTCAACCTG...CAAATCCAAGGATACACAAAGGAGCCATGCTGCCAAGTAAGAGCCCGTCTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR TCA 90 bp GGAAGCAGCCTTAGCATTCAGTTACCCGCACGGAGTTTCCAGCTTCCTCCCTCTTCAGACATTTCAGACTaGTTAACCATTGCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: GSSLSIQLPARSFQLPPSSDISD*LTIAGN
Trigger: GTTCCCAGCAATGGTTAATCAGTCTGAAATGTCTGA...AGAGGGAGGAAGCTGGAAACTCCGTGCGGGTAACTGAATGCTAAGGCTGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR GCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGCCCAACAGTCACTACTaGCAGGATCAGATCATCTGG +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAEPNSHY*QDQIIW
Trigger: CCAGATGATCTGATCCTGGCAGTAGTGACTGTTGGG...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR GCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAACGTGAGAACCTCGGCTaGCACAGCTGTCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKRENLG*HSCLLH
Trigger: ATGGAGAAGACAGCTGTGGCAGCCGAGGTTCTCACG...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR GCA 90 bp CTTCAGCGTGGGCATCATGGCCATCACGAACATGTCACAGTGCTGCAGAGATTTCGGAGCTCCATGTTCTaGTCCCTCAAAGCATCTATA +
Preference number: 4 (lower is better)
Translates to: LQRGHHGHHEHVTVLQRFRSSMF*SLKASI
Trigger: TATAGATGCTTTGAGGGAGCAGAACATGGAGCTCCG...AAATCTCTGCAGCACTGTGACATGTTCGTGATGGCCATGATGCCCACGCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR GCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGACCAAGATAGGTTCCTaGAGAGGTCGTGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAETKIGS*RGREAA
Trigger: AGCAGCTTCACGACCTCTGCAGGAACCTATCTTGGT...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR GCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGATGATGCCTGGAGGTTaGGGAGATACTAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAEMMPGG*GDTSRC
Trigger: ACACCTGCTAGTATCTCCGCAACCTCCAGGCATCAT...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR GCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGACCTACCTGCAGCTCTaGAATGTTTGGGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAETYLQL*NVWGRS
Trigger: GCTTCTTCCCCAAACATTGCAGAGCTGCAGGTAGGT...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR CCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGTGTCTCCCAAGCTCTTaGTGGAGTCTGATGATCTGC +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAECLPSS*WSLMIC
Trigger: GCAGATCATCAGACTCCACCAAGAGCTTGGGAGACA...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300258.8
ENST00000674141.1
CDS-3UTR CCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGGCTGTGGTCATTTGCTaGCAGCGACGTGAAGATAGA +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAEAVVIC*QRREDR
Trigger: TCTATCTTCACGTCGCTGCCAGCAAATGACCACAGC...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR CCA 90 bp GAAACAAAGGGATGGGCCAAAACAAAGGGATGGGCTCTGGCTAGATATCCACAGTGCTGCTGTAATGGCTaGTCCCCAACAGTCACTACT +
Preference number: 4 (lower is better)
Translates to: ETKGWAKTKGWALARYPQCCCNG*SPTVTT
Trigger: AGTAGTGACTGTTGGGGACCAGCCATTACAGCAGCA...CTGTGGATATCTAGCCAGAGCCCATCCCTTTGTTTTGGCCCATCCCTTTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR CCA 90 bp TGGGAAATCAGGGCACTCACAGCCTTCAGAGCTGAGAGCCGTGAACAGAGATTTTGGGAAACAAAGGGATaGGCCAAAACAAAGGGATGG +
Preference number: 4 (lower is better)
Translates to: WEIRALTAFRAESREQRFWETKG*AKTKGW
Trigger: CCATCCCTTTGTTTTGGCCCATCCCTTTGTTTCCCA...AAATCTCTGTTCACGGCTCTCAGCTCTGAAGGCTGTGAGTGCCCTGATTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673699.1
3UTR CAA 72 bp ATGGAAGACGGGCTCTTACTTGGCAGCATGGCTCCTTaGTGTATCCTTGGATTTGCAGCTATGCTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: MEDGLLLGSMAP*CILGFAAMLLS
Trigger: GGAAAGGAGCATAGCTGCAAATCCAAGGATACACAAAGGAGCCATGCTGCCAAGTAAGAGCCCGTCTTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR CAA 72 bp GTGCTTGAGAGCAATGGATGGAAGACGGGCTCTTACTaGGCAGCATGGCTCCTTTGTGTATCCTTGGATTTG +
Preference number: 4 (lower is better)
Translates to: VLESNGWKTGSY*AAWLLCVSLDL
Trigger: CAAATCCAAGGATACACAAAGGAGCCATGCTGCCAAGTAAGAGCCCGTCTTCCATCCATTGCTCTCAAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR CAA 72 bp TGGCCATCACGAACATGTCACAGTGCTGCAGAGATTTaGTTTGTGGCCAGTTTTGGGGCCAGTTTATGGCCA +
Preference number: 4 (lower is better)
Translates to: WPSRTCHSAAEI*FVASFGASLWP
Trigger: TGGCCATAAACTGGCCCCAAAACTGGCCACAAACAAAATCTCTGCAGCACTGTGACATGTTCGTGATGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR TCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGTTGGGGAAGAAGCAGTaGACTCATCAGGTTGAACGT +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAELGKKQ*THQVER
Trigger: ACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAA...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300258.8
ENST00000674141.1
CDS-3UTR TCA 90 bp CAGGGTCTGCATCTTTTCTACATCCACATTCAGCATCTTCTTTACAAAGATCTGGGGCCTGTTTGGAGGTaGGGGGACACTGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: QGLHLFYIHIQHLLYKDLGPVWR*GDTGFL
Trigger: CAGAAAGCCAGTGTCCCCTCACCTCCAAACAGGCCC...CAGATCTTTGTAAAGAAGATGCTGAATGTGGATGTAGAAAAGATGCAGACCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR GCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAGTCTGATGATCTGCTaGTGTAATGGTGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAESLMIC*CNGGIS
Trigger: GGAGATGCCACCATTACAGCAGCAGATCATCAGACT...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR GCA 90 bp GAAATCAGGGCACTCACAGCCTTCAGAGCTGAGAGCCGTGAACAGAGATTTACCAAAAGCAGGTTCCAATaGCAGAGTGTGCGATTCTTG +
Preference number: 4 (lower is better)
Translates to: EIRALTAFRAESREQRFTKSRFQ*QSVRFL
Trigger: CAAGAATCGCACACTCTGGCATTGGAACCTGCTTTT...GGTAAATCTCTGTTCACGGCTCTCAGCTCTGAAGGCTGTGAGTGCCCTGATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR GCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAAGCTGCTGTGGTCATTTaGTGGCAGCGACGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKAAVVI*WQRRED
Trigger: ATCTTCACGTCGCTGCCAGCAAATGACCACAGCAGC...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR GCA 90 bp TTGTGTATCCTTGGATTTGCAGCTATGCTCCTTTCCTCAGACACCGCTGGAGGCAATTTCCTGCAGCTCTaGAATGTTTGGGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: LCILGFAAMLLSSDTAGGNFLQL*NVWGRS
Trigger: GCTTCTTCCCCAAACATTGCAGAGCTGCAGGAAATT...GCCTCCAGCGGTGTCTGAGGAAAGGAGCATAGCTGCAAATCCAAGGATACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR GCA 90 bp GATGGAAGACGGGCTCTTACTTGGCAGCATGGCTCCTTTGTGTATCCTTGGATTACAGCCCAAATTTCCTaGAGCTCTGCAATGTTTGGG +
Preference number: 4 (lower is better)
Translates to: DGRRALTWQHGSFVYPWITAQIS*SSAMFG
Trigger: CCCAAACATTGCAGAGCTGCAGGAAATTTGGGCTGT...AATCCAAGGATACACAAAGGAGCCATGCTGCCAAGTAAGAGCCCGTCTTCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR CCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGCAGCTCTGCAATGTTTaGGGAAGAAGCAGTGAACTC +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAEQLCNV*GRSSEL
Trigger: GAGTTCACTGCTTCTTCCCCAAACATTGCAGAGCTG...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300258.8
ENST00000674141.1
CDS-3UTR CCA 90 bp CTCCTTTGTGTATCCTTGGATTTGCAGCTATGCTCCTTTCCTCAGACACCGCTGCAGCTCTGCAATGTTTaGGGAAGAAGCAGTGAACTC +
Preference number: 4 (lower is better)
Translates to: LLCVSLDLQLCSFPQTPLQLCNV*GRSSEL
Trigger: GAGTTCACTGCTTCTTCCCCAAACATTGCAGAGCTG...CAGCGGTGTCTGAGGAAAGGAGCATAGCTGCAAATCCAAGGATACACAAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR CCA 90 bp CTCCTTTGTGTATCCTTGGATTTGCAGCTATGCTCCTTTCCTCAGACACCGCTGCTGATTAACCATTGCTaGGAACCTAGTGGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: LLCVSLDLQLCSFPQTPLLINHC*EPSGPV
Trigger: AACAGGCCCACTAGGTTCCCAGCAATGGTTAATCAG...CAGCGGTGTCTGAGGAAAGGAGCATAGCTGCAAATCCAAGGATACACAAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR CCA 90 bp CACTCACAGCCTTCAGAGCTGAGAGCCGTGAACAGAGATTTACCCACATATTTATTTGGGGCCAGTTTATaGCCAGATCTGGGGGCCTAT +
Preference number: 4 (lower is better)
Translates to: HSQPSELRAVNRDLPTYLFGASL*PDLGAY
Trigger: ATAGGCCCCCAGATCTGGCCATAAACTGGCCCCAAA...TAAATATGTGGGTAAATCTCTGTTCACGGCTCTCAGCTCTGAAGGCTGTGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR TCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAACAGGTTGAACGTGGCTaGGAAATCCACCTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKQVERG*EIHLQN
Trigger: GTTCTGAAGGTGGATTTCTCAGCCACGTTCAACCTG...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300258.8
ENST00000674141.1
CDS-3UTR GCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAATGGAGTCTGATGATCTaGTGCTGTAATGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKWSLMI*CCNGGI
Trigger: GATGCCACCATTACAGCAGCAGATCATCAGACTCCA...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR GCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAACGGAGCTCCATGTTCTaGTCCCTCAAAGCATCTATA +
Preference number: 4 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKRSSMF*SLKASI
Trigger: TATAGATGCTTTGAGGGAGCAGAACATGGAGCTCCG...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300258.8
ENST00000674141.1
CDS-3UTR GCA 90 bp CTTAGCATTCAGTTACCCGCACGGAGTTTCCAGCTTCCTCCCTCTTCAGCCTCAACTGGCTTTCTGAATTaGCAGAGTTCTTATTCTGAT +
Preference number: 4 (lower is better)
Translates to: LSIQLPARSFQLPPSSASTGFLN*QSSYSD
Trigger: ATCAGAATAAGAACTCTGGCAATTCAGAAAGCCAGT...TGAGGCTGAAGAGGGAGGAAGCTGGAAACTCCGTGCGGGTAACTGAATGCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR CCA 90 bp ATTAACTGTCTTCAAGCCCTGAGGTTCTTTTCTCTGCTTGGTCTATTCTGCTGTAGACGGGCTCTTACTTaGCAGCATGGCTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: INCLQALRFFSLLGLFCCRRALT*QHGSFV
Trigger: CACAAAGGAGCCATGCTGCCAAGTAAGAGCCCGTCT...ACAGCAGAATAGACCAAGCAGAGAAAAGAACCTCAGGGCTTGAAGACAGTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR TCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAAGTTGCTCTTCTGTCTTaGCGTCTCCTGGAAAGATTT +
Preference number: 4 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKVALLS*RLLERF
Trigger: AAATCTTTCCAGGAGACGTCAAGACAGAAGAGCAAC...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR GCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAAAAAAGCAGGTTCCAATaGCAGAGTGTGCGATTCTTG +
Preference number: 4 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKKSRFQ*QSVRFL
Trigger: CAAGAATCGCACACTCTGGCATTGGAACCTGCTTTT...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000300258.8
ENST00000674141.1
CDS-3UTR GCA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAATGTTGTAGTTTGGGCTaGGATCTGGTAGATAGTGCT +
Preference number: 4 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKCCSLG*DLVDSA
Trigger: AGCACTATCTACCAGATCGCAGCCCAAACTACAACA...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR CCA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGTCTATTTTCCTGTGGTaGTGTTTTCCACGAGCTAAT +
Preference number: 4 (lower is better)
Translates to: LCNVWGRSSELIRLNVAESIFLW*CFPRAN
Trigger: ATTAGCTCGTGGAAAACACCACCACAGGAAAATAGA...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR CCA 90 bp CAGGGTCTGCATCTTTTCTACATCCACATTCAGCATCTTCTTTACAAAGATCTGGAGGTGAGGGGACACTaGCTTTCTGAATTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: QGLHLFYIHIQHLLYKDLEVRGH*LSELPE
Trigger: CTCTGGCAATTCAGAAAGCCAGTGTCCCCTCACCTC...CAGATCTTTGTAAAGAAGATGCTGAATGTGGATGTAGAAAAGATGCAGACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR TCA 90 bp CTTACTTGGCAGCATGGCTCCTTTGTGTATCCTTGGATTTGCAGCTATGCTCCTTTTGCATCCTTGGATTaGGTTTCAACTTTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LTWQHGSFVYPWICSYAPFASLD*VSTFSW
Trigger: CCAAGAGAAAGTTGAAACTCAATCCAAGGATGCAAA...AGGAGCATAGCTGCAAATCCAAGGATACACAAAGGAGCCATGCTGCCAAGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR TCA 90 bp GAAACAAAGGGATGGGCCAAAACAAAGGGATGGGCTCTGGCTAGATATCCACAGTACCCACATATTTATTaGCAGCAAGCCAGTGATAAA +
Preference number: 4 (lower is better)
Translates to: ETKGWAKTKGWALARYPQYPHIY*QQASDK
Trigger: TTTATCACTGGCTTGCTGTCAATAAATATGTGGGTA...CTGTGGATATCTAGCCAGAGCCCATCCCTTTGTTTTGGCCCATCCCTTTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR CCA 90 bp GAACAGAGATTTACCCACATATTTATTGACAGCAAGCCAGTGATAAATTGTTTCGCAGCCGGGAGGACTTaGAATCTGCTCCACAGCAAG +
Preference number: 4 (lower is better)
Translates to: EQRFTHIFIDSKPVINCFAAGRT*NLLHSK
Trigger: CTTGCTGTGGAGCAGATTCCAAGTCCTCCCGGCTGC...GAAACAATTTATCACTGGCTTGCTGTCAATAAATATGTGGGTAAATCTCTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR TCA 90 bp CAGGGTCTGCATCTTTTCTACATCCACATTCAGCATCTTCTTTACAAAGATCTGCTGGTAGATAGTGCTTaGGAGCAATGGATGGAAGAC +
Preference number: 4 (lower is better)
Translates to: QGLHLFYIHIQHLLYKDLLVDSA*EQWMED
Trigger: GTCTTCCATCCATTGCTCTCAAGCACTATCTACCAG...CAGATCTTTGTAAAGAAGATGCTGAATGTGGATGTAGAAAAGATGCAGACCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR GCA 90 bp CGTGTGTGTCGTCTGAGCATTTGCATAATAGTAAACATCACACGTAAGTTCACACGGAGCTCCATGTTCTaGTCCCTCAAAGCATCTATA +
Preference number: 4 (lower is better)
Translates to: RVCRLSICIIVNITRKFTRSSMF*SLKASI
Trigger: TATAGATGCTTTGAGGGAGCAGAACATGGAGCTCCG...TGTGAACTTACGTGTGATGTTTACTATTATGCAAATGCTCAGACGACACACACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR GCA 90 bp CTCCTTTGTGTATCCTTGGATTTGCAGCTATGCTCCTTTCCTCAGACACCGCTGTGTCGTCTGAGCATTTaGATAATAGTAAACATCACA +
Preference number: 4 (lower is better)
Translates to: LLCVSLDLQLCSFPQTPLCRLSI*IIVNIT
Trigger: TGTGATGTTTACTATTATGCAAATGCTCAGACGACA...CAGCGGTGTCTGAGGAAAGGAGCATAGCTGCAAATCCAAGGATACACAAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR CCA 90 bp TATGTCTGCCATTTCAGACATTTCAGACTGATTAACCATTGCTGGGAACCTAGTCTTGAGAGCAATGGATaGAAGACGGGCTCTTACTTG +
Preference number: 4 (lower is better)
Translates to: YVCHFRHFRLINHCWEPSLESNG*KTGSYL
Trigger: CAAGTAAGAGCCCGTCTTCCATCCATTGCTCTCAAG...ACTAGGTTCCCAGCAATGGTTAATCAGTCTGAAATGTCTGAAATGGCAGACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR TCA 90 bp TGGTTGAATTCTTGCCCTTGGTTTATCAGCAGGGAGAAGTGGCAGAGTGACTTTCTTGAATCATTTTACTaGATTGCTTTGCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: WLNSCPWFISREKWQSDFLESFY*IALHPW
Trigger: CCAAGGATGCAAAGCAATTCAGTAAAATGATTCAAG...AAAGTCACTCTGCCACTTCTCCCTGCTGATAAACCAAGGGCAAGAATTCAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR GCA 90 bp CGTGTGTGTCGTCTGAGCATTTGCATAATAGTAAACATCACACGTAAGTTCACAAAAAGCAGGTTCCAATaGCAGAGTGTGCGATTCTTG +
Preference number: 4 (lower is better)
Translates to: RVCRLSICIIVNITRKFTKSRFQ*QSVRFL
Trigger: CAAGAATCGCACACTCTGGCATTGGAACCTGCTTTT...TGTGAACTTACGTGTGATGTTTACTATTATGCAAATGCTCAGACGACACACACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR GCA 90 bp CGTGTGTGTCGTCTGAGCATTTGCATAATAGTAAACATCACACGTAAGTTCACAGTGTATCCTTGGATTTaGAGCTATGCTCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RVCRLSICIIVNITRKFTVYPWI*SYAPFL
Trigger: GAGGAAAGGAGCATAGCTGCAAATCCAAGGATACAC...TGTGAACTTACGTGTGATGTTTACTATTATGCAAATGCTCAGACGACACACACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR TCA 90 bp CAGGGTCTGCATCTTTTCTACATCCACATTCAGCATCTTCTTTACAAAGATCTGAAGGGTCTTTGTGGTTaGATTCTTGCCCTTGGTTTA +
Preference number: 4 (lower is better)
Translates to: QGLHLFYIHIQHLLYKDLKGLCG*ILALGL
Trigger: TAAACCAAGGGCAAGAATTCAACCACAAAGACCCTT...CAGATCTTTGTAAAGAAGATGCTGAATGTGGATGTAGAAAAGATGCAGACCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR GCA 90 bp CGTGTGTGTCGTCTGAGCATTTGCATAATAGTAAACATCACACGTAAGTTCACATTGTGGTTGAATTCTTaGCCTTGGTTTATCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RVCRLSICIIVNITRKFTLWLNS*PWFISR
Trigger: CCTGCTGATAAACCAAGGGCAAGAATTCAACCACAA...TGTGAACTTACGTGTGATGTTTACTATTATGCAAATGCTCAGACGACACACACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR GCA 90 bp CAAATTTCCTGCAGCTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTCTGAATTCTATGTCTaGCATTTCAGACATTTCAGA +
Preference number: 4 (lower is better)
Translates to: QISCSSAMFGEEAVNSSGSEFYV*HFRHFR
Trigger: TCTGAAATGTCTGAAATGGCAGACATAGAATTCAGA...ACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAGCTGCAGGAAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR GCA 90 bp TGGTTGAATTCTTGCCCTTGGTTTATCAGCAGGGAGAAGTGGCAGAGTGACTTTTTTACTGAATTGCTTTaGATCCTTGGATTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: WLNSCPWFISREKWQSDFFTELL*ILGLSF
Trigger: GAAACTCAATCCAAGGATGCAAAGCAATTCAGTAAA...AAAGTCACTCTGCCACTTCTCCCTGCTGATAAACCAAGGGCAAGAATTCAACCA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR CCA 90 bp CTTTCTCTTGGTCTTGATAAGCTTCCTAGCCATCCAGATTCTGAATTCTATGTCTTGAATTCTTGCCCTTaGTTTATCAGCAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LSLGLDKLPSHPDSEFYVLNSCP*FISREK
Trigger: CTTCTCCCTGCTGATAAACCAAGGGCAAGAATTCAA...GACATAGAATTCAGAATCTGGATGGCTAGGAAGCTTATCAAGACCAAGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR GCA 90 bp ATTAACTGTCTTCAAGCCCTGAGGTTCTTTTCTCTGCTTGGTCTATTCTGCTGTTTACAAAGATCTGTCTaGTTGTTAAGAAACTGCACA +
Preference number: 4 (lower is better)
Translates to: INCLQALRFFSLLGLFCCLQRSV*LLRNCT
Trigger: TGTGCAGTTTCTTAACAAGCAGACAGATCTTTGTAA...ACAGCAGAATAGACCAAGCAGAGAAAAGAACCTCAGGGCTTGAAGACAGTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR CCA 90 bp ATTAACTGTCTTCAAGCCCTGAGGTTCTTTTCTCTGCTTGGTCTATTCTGCTGTATTGCTTTGCATCCTTaGATTGAGTTTCAACTTTCT +
Preference number: 4 (lower is better)
Translates to: INCLQALRFFSLLGLFCCIALHP*IEFQLS
Trigger: AGAAAGTTGAAACTCAATCCAAGGATGCAAAGCAAT...ACAGCAGAATAGACCAAGCAGAGAAAAGAACCTCAGGGCTTGAAGACAGTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
3UTR CAA 72 bp TTGAATCATTTTACTGAATTGCTTTGCATCCTTGGATaGAGTTTCAACTTTCTCTTGGTCTTGATAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LNHFTELLCILG*SFNFLLVLISF
Trigger: GAAGCTTATCAAGACCAAGAGAAAGTTGAAACTCAATCCAAGGATGCAAAGCAATTCAGTAAAATGATTCAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS TCA 90 bp TGGCCAGGCAGAAGACTTGGGAGGGGCTGGCAGGCAGGTGGCCTGTaGGACAGATGTGCCCCAGTCCCACAGGGAAGGTGGCCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: WPGRRLGRGWQAGGL*DRCAPVPQGRWPCF
Trigger: AAAGCAGGGCCACCTTCCCTGTGGGACTGGGGCACATCTGTCTCACAGGCCACCTGCCTGCCAGCCCCTCCCAAGTCTTCTGCCTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS GCA 90 bp AAGACTTGGGAGGGGCTGGCAGGCAGGTGGCCTGTGAGACAGATGTaGCCCAGTCCCACAGGGAAGGTGGCCCTGCTTTCTCCCCAGTGG +
Preference number: 5 (lower is better)
Translates to: KTWEGLAGRWPVRQM*PSPTGKVALLSPQW
Trigger: CCACTGGGGAGAAAGCAGGGCCACCTTCCCTGTGGGACTGGGGCACATCTGTCTCACAGGCCACCTGCCTGCCAGCCCCTCCCAAGTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS CCA 90 bp CCAGGCTGGGCAGTGGAGCTATGCTGTATACAGGCTTCTGCAGGGTaGCCAGGCAGAAGACTTGGGAGGGGCTGGCAGGCAGGTGGCCTG +
Preference number: 5 (lower is better)
Translates to: PGWAVELCCIQASAG*PGRRLGRGWQAGGL
Trigger: CAGGCCACCTGCCTGCCAGCCCCTCCCAAGTCTTCTGCCTGGCCACCCTGCAGAAGCCTGTATACAGCATAGCTCCACTGCCCAGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS CCA 90 bp GAACAGAGGCCGGCCAGCATGGGGTCACACTGGCTTCAGTTAACCTaGGTTCCAATCCTGCCTCTGCCACTTGGTAGCGGTGACACCTTG +
Preference number: 5 (lower is better)
Translates to: EQRPASMGSHWLQLT*VPILPLPLGSGDTL
Trigger: CAAGGTGTCACCGCTACCAAGTGGCAGAGGCAGGATTGGAACCCAGGTTAACTGAAGCCAGTGTGACCCCATGCTGGCCGGCCTCTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673667.1
ENST00000673787.1
CDS CCA 90 bp AATGTGGCATTTGTGGAGGTGGCCAGGCCGGTCAGCCAACTTGGCTaGGTTCTGGAAGGGTCTAGTCCATGGGCTCCCACCATATCCCAG +
Preference number: 5 (lower is better)
Translates to: NVAFVEVARPVSQLG*VLEGSSPWAPTISQ
Trigger: CTGGGATATGGTGGGAGCCCATGGACTAGACCCTTCCAGAACCCAGCCAAGTTGGCTGACCGGCCTGGCCACCTCCACAAATGCCACATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS-3UTR CAA 90 bp GAGCCCTCAGACTCACGGGTGGAGACAGTGCCACACACATCACCTCCGCAGCCTCATGTACCCGTGTCCTaGGAAGAACACAGGACTCCA +
Preference number: 5 (lower is better)
Translates to: EPSDSRVETVPHTSPPQPHVPVS*EEHRTP
Trigger: TGGAGTCCTGTGTTCTTCCAAGGACACGGGTACATG...AGGCTGCGGAGGTGATGTGTGTGGCACTGTCTCCACCCGTGAGTCTGAGGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS GCA 90 bp CTGCTTGCAGCTCCCTTCTCCAGACCCTTGGGACTGGGTCCCAGGTaGACTATAGGATCTGAAGGGCTCCCAGGCTTCCAGAATGCACTT +
Preference number: 5 (lower is better)
Translates to: LLAAPFSRPLGLGPR*TIGSEGLPGFQNAL
Trigger: AAGTGCATTCTGGAAGCCTGGGAGCCCTTCAGATCCTATAGTGCACCTGGGACCCAGTCCCAAGGGTCTGGAGAAGGGAGCTGCAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS TCA 90 bp GTTCCTGGCGCCATGCCTGTGGCAGCTCTGTCTCTGTCTAATCTCTaGAGACATCCACCTACCAGCTCAAATGTCCGTGGCGCGTGTGAG +
Preference number: 5 (lower is better)
Translates to: VPGAMPVAALSLSNL*RHPPTSSNVRGACE
Trigger: CTCACACGCGCCACGGACATTTGAGCTGGTAGGTGGATGTCTTCAGAGATTAGACAGAGACAGAGCTGCCACAGGCATGGCGCCAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS GCA 90 bp TTGAACCTGGGAGGCGGAGTTGGCAGTGAGCTGAGATCTCGTCACTaGTTGGGTGACAAGGGTGAAACTCCTTTCCTCAGACACCGCTGG +
Preference number: 5 (lower is better)
Translates to: LNLGGGVGSELRSRH*LGDKGETPFLRHRW
Trigger: CCAGCGGTGTCTGAGGAAAGGAGTTTCACCCTTGTCACCCAAGCAGTGACGAGATCTCAGCTCACTGCCAACTCCGCCTCCCAGGTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673907.1
CDS CCA 90 bp CTCCAGTCTCCAAGTCCCTTCACTTACCCTTTCCTCAGACACCGCTaGAGGCCAGGAAGCAGCCTTAGCATTCAGTTACCCGCACGGAGT +
Preference number: 5 (lower is better)
Translates to: LQSPSPFTYPFLRHR*RPGSSLSIQLPARS
Trigger: ACTCCGTGCGGGTAACTGAATGCTAAGGCTGCTTCCTGGCCTCCAGCGGTGTCTGAGGAAAGGGTAAGTGAAGGGACTTGGAGACTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS GCA 90 bp GGGTGGAAGGATCAATCAGCACCTTCAAATTCCAGCCCTCACTGCTaGCAAGACAGGGCACCACGTTCTCGCGCTCACAAAGACGATCCT +
Preference number: 5 (lower is better)
Translates to: GWKDQSAPSNSSPHC*QDRAPRSRAHKDDP
Trigger: AGGATCGTCTTTGTGAGCGCGAGAACGTGGTGCCCTGTCTTGGCAGCAGTGAGGGCTGGAATTTGAAGGTGCTGATTGATCCTTCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS GCA 90 bp CTGGGGTGGAAGGATCAATCAGCACCTTCAAATTCCAGCCCTCACTaGTGCCAAGACAGGGCACCACGTTCTCGCGCTCACAAAGACGAT +
Preference number: 5 (lower is better)
Translates to: LGWKDQSAPSNSSPH*CQDRAPRSRAHKDD
Trigger: ATCGTCTTTGTGAGCGCGAGAACGTGGTGCCCTGTCTTGGCAGCAGTGAGGGCTGGAATTTGAAGGTGCTGATTGATCCTTCCACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS CCA 90 bp GGAGGTGTCTGGATCTCACACAGGATGCATTCACAGGGGCTGGGGTaGAAGGATCAATCAGCACCTTCAAATTCCAGCCCTCACTGCTGC +
Preference number: 5 (lower is better)
Translates to: GGVWISHRMHSQGLG*KDQSAPSNSSPHCC
Trigger: GCAGCAGTGAGGGCTGGAATTTGAAGGTGCTGATTGATCCTTCCACCCCAGCCCCTGTGAATGCATCCTGTGTGAGATCCAGACACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS CCA 90 bp GAGTTCACAGGAACCACAGATTCCCACACCTTCATTCCCGAGGGGTaGGTGAGGGGGTGTCTACATGCTCCTTCTCAAGCACAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: EFTGTTDSHTFIPEG*VRGCLHAPSQAQLS
Trigger: TGACAGCTGTGCTTGAGAAGGAGCATGTAGACACCCCCTCACCCACCCCTCGGGAATGAAGGTGTGGGAATCTGTGGTTCCTGTGAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS CCA 90 bp AGGCCGGTCAGCCAACTTGGCTGGGTTCTGGAAGGGTCTAGTCCATaGGCTCCCACCATATCCCAGGTGATTCTATCTGCTCAGAGTTCA +
Preference number: 5 (lower is better)
Translates to: RPVSQLGWVLEGSSP*APTISQVILSAQSS
Trigger: TGAACTCTGAGCAGATAGAATCACCTGGGATATGGTGGGAGCCCATGGACTAGACCCTTCCAGAACCCAGCCAAGTTGGCTGACCGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS CCA 90 bp CCGCCAAAGCTGTCCCTAGCACAAAGGTTCCTGGCGCCATGCCTGTaGCAGCTCTGTCTCTGTCTAATCTCTGAAGACATCCACCTACCA +
Preference number: 5 (lower is better)
Translates to: PPKLSLAQRFLAPCL*QLCLCLISEDIHLP
Trigger: TGGTAGGTGGATGTCTTCAGAGATTAGACAGAGACAGAGCTGCCACAGGCATGGCGCCAGGAACCTTTGTGCTAGGGACAGCTTTGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS TCA 90 bp GGGTTCCAATCCTGCCTCTGCCACTTGGTAGCGGTGACACCTTGGTaGCTTTCTGGGCACCATTTCTGCCTCCATTTGCTCATCTGTCTG +
Preference number: 5 (lower is better)
Translates to: GFQSCLCHLVAVTPW*LSGHHFCLHLLICL
Trigger: CAGACAGATGAGCAAATGGAGGCAGAAATGGTGCCCAGAAAGTCACCAAGGTGTCACCGCTACCAAGTGGCAGAGGCAGGATTGGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673787.1
CDS CCA 90 bp GACATGTGTATGTTTGAACAGAGGCCGGCCAGCATGGGGTCACACTaGCTTCAGTTAACCTGGGTTCCAATCCTGCCTCTGCCACTTGGT +
Preference number: 5 (lower is better)
Translates to: DMCMFEQRPASMGSH*LQLTWVPILPLPLG
Trigger: ACCAAGTGGCAGAGGCAGGATTGGAACCCAGGTTAACTGAAGCCAGTGTGACCCCATGCTGGCCGGCCTCTGTTCAAACATACACATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673667.1
ENST00000673787.1
CDS CCA 90 bp CACGAGGAGGTGTCTGGATCTCACACAGGATGCATTCACAGGGGCTaGGGTGGAAGGATCAATCAGCACCTTCAAATTCCAGCCCTCACT +
Preference number: 5 (lower is better)
Translates to: HEEVSGSHTGCIHRG*GGRINQHLQIPALT
Trigger: AGTGAGGGCTGGAATTTGAAGGTGCTGATTGATCCTTCCACCCCAGCCCCTGTGAATGCATCCTGTGTGAGATCCAGACACCTCCTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS-3UTR CAA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGGGCATCTCCCCAGTGTaGCAGTCCTCCGTGAGAACC +
Preference number: 5 (lower is better)
Translates to: LCNVWGRSSELIRLNVAEGISPV*QSSVRT
Trigger: GGTTCTCACGGAGGACTGCAACACTGGGGAGATGCC...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS TCA 90 bp GGGTTCTGGAAGGGTCTAGTCCATGGGCTCCCACCATATCCCAGGTaGTTCTATCTGCTCAGAGTTCACAGGAACCACAGATTCCCACAC +
Preference number: 5 (lower is better)
Translates to: GFWKGLVHGLPPYPR*FYLLRVHRNHRFPH
Trigger: GTGTGGGAATCTGTGGTTCCTGTGAACTCTGAGCAGATAGAATCACCTGGGATATGGTGGGAGCCCATGGACTAGACCCTTCCAGAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS TCA 90 bp TCTCTGAAGACATCCACCTACCAGCTCAAATGTCCGTGGCGCGTGTaGGGTCTCCAGTCTCCAAGTCCCTTCACTTACCCTTTCCTCAGA +
Preference number: 5 (lower is better)
Translates to: SLKTSTYQLKCPWRV*GLQSPSPFTYPFLR
Trigger: TCTGAGGAAAGGGTAAGTGAAGGGACTTGGAGACTGGAGACCTCACACGCGCCACGGACATTTGAGCTGGTAGGTGGATGTCTTCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS CCA 90 bp GGAAGACGGGCTCTTACTTGGCAGCATGGCTCCTTTGTGTATCCTTaGATTTGCAGCTATGCTCTGTGGTACAAGGGGGAGAGAGGTGAC +
Preference number: 5 (lower is better)
Translates to: GRRALTWQHGSFVYP*ICSYALWYKGERGD
Trigger: GTCACCTCTCTCCCCCTTGTACCACAGAGCATAGCTGCAAATCCAAGGATACACAAAGGAGCCATGCTGCCAAGTAAGAGCCCGTCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS-3UTR CAA 90 bp CTTCAGCGTGGGCATCATGGCCATCACGAACATGTCACAGTGCTGCAGAGATTTCTGTCTCCCAAGCTCTaGGTGGAGTCTGATGATCTG +
Preference number: 5 (lower is better)
Translates to: LQRGHHGHHEHVTVLQRFLSPKL*VESDDL
Trigger: CAGATCATCAGACTCCACCAAGAGCTTGGGAGACAG...AAATCTCTGCAGCACTGTGACATGTTCGTGATGGCCATGATGCCCACGCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR CAA 90 bp CCAGCTTCCTCCCTCTTCAGCCTCAGGGTCTGCATCTTTTCTACATCCACATTCCTGTCTCCCAAGCTCTaGGTGGAGTCTGATGATCTG +
Preference number: 5 (lower is better)
Translates to: PASSLFSLRVCIFSTSTFLSPKL*VESDDL
Trigger: CAGATCATCAGACTCCACCAAGAGCTTGGGAGACAG...GAATGTGGATGTAGAAAAGATGCAGACCCTGAGGCTGAAGAGGGAGGAAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR CAA 90 bp GGCTCCTTTGTGTATCCTTGGATTTGCAGCTATGCTCCTTTCCTCAGACACCGCAAGACGGGCTCTTACTaGGCAGCATGGCTCCTTTGT +
Preference number: 5 (lower is better)
Translates to: GSFVYPWICSYAPFLRHRKTGSY*AAWLLC
Trigger: ACAAAGGAGCCATGCTGCCAAGTAAGAGCCCGTCTT...GCGGTGTCTGAGGAAAGGAGCATAGCTGCAAATCCAAGGATACACAAAGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR CAA 90 bp GGTTTTCCACCCTGGGTGGGCCAGGTGTTCCTTGCCATCATTCTGGTAAACCCAAGTGCTGCAGAGATTTaGTTTGTGGCCAGTTTTGGG +
Preference number: 5 (lower is better)
Translates to: GFPPWVGQVFLAIILVNPSAAEI*FVASFG
Trigger: CCCAAAACTGGCCACAAACAAAATCTCTGCAGCACT...TGGGTTTACCAGAATGATGGCAAGGAACACCTGGCCCACCCAGGGTGGAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS GCA 90 bp CAAACAAAATGCACGTGCCTGCATGTGTGTGTCTGTGTGTGCTTGTaGATGTCTGTGTGCATGCCTATGTGTGTCTCTCTGTGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: QTKCTCLHVCVCVCL*MSVCMPMCVSLCSS
Trigger: GGACGAGCACAGAGAGACACACATAGGCATGCACACAGACATGCACAAGCACACACAGACACACACATGCAGGCACGTGCATTTTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS GCA 90 bp GCAGGACAAACAAAATGCACGTGCCTGCATGTGTGTGTCTGTGTGTaGTTGTGCATGTCTGTGTGCATGCCTATGTGTGTCTCTCTGTGC +
Preference number: 5 (lower is better)
Translates to: AGQTKCTCLHVCVCV*LCMSVCMPMCVSLC
Trigger: GCACAGAGAGACACACATAGGCATGCACACAGACATGCACAAGCACACACAGACACACACATGCAGGCACGTGCATTTTGTTTGTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS GCA 90 bp GTGTGTGCGTGTGTATGTGTGTGTACACATACATGCATGTGTGCGTaGGTATGCTATTTCTCTCTCAAGACCACATTGCAAACTGGCCCC +
Preference number: 5 (lower is better)
Translates to: VCACVCVCTHTCMCA*VCYFSLKTTLQTGP
Trigger: GGGGCCAGTTTGCAATGTGGTCTTGAGAGAGAAATAGCATACGCACGCACACATGCATGTATGTGTACACACACATACACACGCACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673667.1
ENST00000673787.1
CDS GCA 90 bp TTCCATCAGAATCAATGGCTGCTTGCAGGACAAACAAAATGCACGTaGCTGCATGTGTGTGTCTGTGTGTGCTTGTGCATGTCTGTGTGC +
Preference number: 5 (lower is better)
Translates to: FHQNQWLLAGQTKCT*LHVCVCVCLCMSVC
Trigger: GCACACAGACATGCACAAGCACACACAGACACACACATGCAGGCACGTGCATTTTGTTTGTCCTGCAAGCAGCCATTGATTCTGATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS-3UTR CAA 90 bp TGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGAAACTGTCTCCCAAGCTCTaGGTGGAGTCTGATGATCTG +
Preference number: 5 (lower is better)
Translates to: CNVWGRSSELIRLNVAEKLSPKL*VESDDL
Trigger: CAGATCATCAGACTCCACCAAGAGCTTGGGAGACAG...TTTCTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300258.8
ENST00000674141.1
CDS-3UTR CAA 90 bp TTGTGTATCCTTGGATTTGCAGCTATGCTCCTTTCCTCAGACACCGCTGGAGGCGTTGAATTCTTGCCCTaGGTTTATCAGCAGGGAGAA +
Preference number: 5 (lower is better)
Translates to: LCILGFAAMLLSSDTAGGVEFLP*VYQQGE
Trigger: TTCTCCCTGCTGATAAACCAAGGGCAAGAATTCAAC...GCCTCCAGCGGTGTCTGAGGAAAGGAGCATAGCTGCAAATCCAAGGATACACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR CAA 90 bp CTTAGCATTCAGTTACCCGCACGGAGTTTCCAGCTTCCTCCCTCTTCAGCCTCAAACTTTCTCTTGGTCTaGATAAGCTTCCTAGCCATC +
Preference number: 5 (lower is better)
Translates to: LSIQLPARSFQLPPSSASNFLLV*ISFLAI
Trigger: GATGGCTAGGAAGCTTATCAAGACCAAGAGAAAGTT...TGAGGCTGAAGAGGGAGGAAGCTGGAAACTCCGTGCGGGTAACTGAATGCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS-3UTR CAA 90 bp CACTCACAGCCTTCAGAGCTGAGAGCCGTGAACAGAGATTTACCCACATATTTATGTTTGTGGCCAGTTTaGGGGCCAGTTTATGGCCAG +
Preference number: 5 (lower is better)
Translates to: HSQPSELRAVNRDLPTYLCLWPV*GPVYGQ
Trigger: CTGGCCATAAACTGGCCCCAAAACTGGCCACAAACA...TAAATATGTGGGTAAATCTCTGTTCACGGCTCTCAGCTCTGAAGGCTGTGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS-3UTR CAA 90 bp TGGGAAATCAGGGCACTCACAGCCTTCAGAGCTGAGAGCCGTGAACAGAGATTTCGCTCATGCTACTGTTaGTGGTTTAAGAACGCCTTT +
Preference number: 5 (lower is better)
Translates to: WEIRALTAFRAESREQRFRSCYC*WFKNAF
Trigger: AAAGGCGTTCTTAAACCACAAACAGTAGCATGAGCG...AAATCTCTGTTCACGGCTCTCAGCTCTGAAGGCTGTGAGTGCCCTGATTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673699.1
CDS TCA 90 bp GACAGCATCACCTGCAGTTTCTATGGCAGAGATTCCATAGTAGGTTaGACACTGCTCCCCCAAATACACGTCTTCCTGGAACCTCAGAAT +
Preference number: 5 (lower is better)
Translates to: DSITCSFYGRDSIVG*TLLPQIHVFLEPQN
Trigger: ATTCTGAGGTTCCAGGAAGACGTGTATTTGGGGGAGCAGTGTTCAACCTACTATGGAATCTCTGCCATAGAAACTGCAGGTGATGCTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674032.1
CDS CCA 90 bp GTGTGCGTGCGTATGCTATTTCTCTCTCAAGACCACATTGCAAACTaGCCCCTGTGGGATGTTGTTTCTGCCTTACAGATTGACATGTGT +
Preference number: 5 (lower is better)
Translates to: VCVRMLFLSQDHIAN*PLWDVVSALQIDMC
Trigger: ACACATGTCAATCTGTAAGGCAGAAACAACATCCCACAGGGGCCAGTTTGCAATGTGGTCTTGAGAGAGAAATAGCATACGCACGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673667.1
ENST00000673787.1
CDS CCA 90 bp TGCCAAACATTTTCAGTGAGGGCCTTTTTGCTCATTGGTCATGACTaGTGTCAGGCAACCCTTGGAAATTTCCTCACGACCTTAGAGGGA +
Preference number: 5 (lower is better)
Translates to: CQTFSVRAFLLIGHD*CQATLGNFLTTLEG
Trigger: TCCCTCTAAGGTCGTGAGGAAATTTCCAAGGGTTGCCTGACACCAGTCATGACCAATGAGCAAAAAGGCCCTCACTGAAAATGTTTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674032.1
CDS TCA 90 bp CACCTTTTCAGCCTGGGATCATGCCCTTTTCTGTGCTTGGATGGCTaGACTATGAAATGCCAGGTTGACATATTCAGTGCTTCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: HLFSLGSCPFLCLDG*TMKCQVDIFSASRN
Trigger: ATTCCTGGAAGCACTGAATATGTCAACCTGGCATTTCATAGTTCAGCCATCCAAGCACAGAAAAGGGCATGATCCCAGGCTGAAAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS CCA 90 bp AATTTCCTCACGACCTTAGAGGGACAGCATCACCTGCAGTTTCTATaGCAGAGATTCCATAGTAGGTTGAACACTGCTCCCCCAAATACA +
Preference number: 5 (lower is better)
Translates to: NFLTTLEGQHHLQFL*QRFHSRLNTAPPNT
Trigger: TGTATTTGGGGGAGCAGTGTTCAACCTACTATGGAATCTCTGCCATAGAAACTGCAGGTGATGCTGTCCCTCTAAGGTCGTGAGGAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674032.1
CDS-3UTR CAA 90 bp AGACGGGCTCTTACTTGGCAGCATGGCTCCTTTGTGTATCCTTGGATTTGCAGCGGTTCTTTTCTCTGCTaGGTCTATTCTGCTGTTAAT +
Preference number: 5 (lower is better)
Translates to: RRALTWQHGSFVYPWICSGSFLC*VYSAVN
Trigger: ATTAACAGCAGAATAGACCAAGCAGAGAAAAGAACC...GCTGCAAATCCAAGGATACACAAAGGAGCCATGCTGCCAAGTAAGAGCCCGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS TCA 90 bp AAAGTGCCAAACATTTTCAGTGAGGGCCTTTTTGCTCATTGGTCATaGCTGGTGTCAGGCAACCCTTGGAAATTTCCTCACGACCTTAGA +
Preference number: 5 (lower is better)
Translates to: KVPNIFSEGLFAHWS*LVSGNPWKFPHDLR
Trigger: TCTAAGGTCGTGAGGAAATTTCCAAGGGTTGCCTGACACCAGTCATGACCAATGAGCAAAAAGGCCCTCACTGAAAATGTTTGGCACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674032.1
CDS GCA 90 bp ATGCTCACATGTGTGTGTGCGTGTGTATGTGTGTGTACACATACATaGATGTGTGCGTGCGTATGCTATTTCTCTCTCAAGACCACATTG +
Preference number: 5 (lower is better)
Translates to: MLTCVCACVCVCTHT*MCACVCYFSLKTTL
Trigger: CAATGTGGTCTTGAGAGAGAAATAGCATACGCACGCACACATGCATGTATGTGTACACACACATACACACGCACACACACATGTGAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673667.1
ENST00000673787.1
CDS-3UTR CAA 90 bp CTCTGCAATGTTTGGGGAAGAAGCAGTGAACTCATCAGGTTGAACGTGGCTGAGCTATCTTTAAACTCATaGGCTTTGGAGGAGCTGAAT +
Preference number: 5 (lower is better)
Translates to: LCNVWGRSSELIRLNVAELSLNS*ALEELN
Trigger: ATTCAGCTCCTCCAAAGCCAATGAGTTTAAAGATAG...CTCAGCCACGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300258.8
CDS-3UTR CAA 90 bp TCCCTCTTCAGCCTCAGGGTCTGCATCTTTTCTACATCCACATTCAGCATCTTCTTTGTGGTTGAATTCTaGCCCTTGGTTTATCAGCAG +
Preference number: 5 (lower is better)
Translates to: SLFSLRVCIFSTSTFSIFFVVEF*PLVYQQ
Trigger: CTGCTGATAAACCAAGGGCAAGAATTCAACCACAAA...GAAGATGCTGAATGTGGATGTAGAAAAGATGCAGACCCTGAGGCTGAAGAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS CCA 90 bp TCACCAGGTCCACTCCTGGGGACTGGGGGAGCCATCTCTGATCGCTaGCACTTTGCCAGCAATTCCAATTATTTATTTATTTATTTATTT +
Preference number: 5 (lower is better)
Translates to: SPGPLLGTGGAISDR*HFASNSNYLFIYLF
Trigger: AAATAAATAAATAAATAAATAATTGGAATTGCTGGCAAAGTGCCAGCGATCAGAGATGGCTCCCCCAGTCCCCAGGAGTGGACCTGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS-3UTR CAA 90 bp TCCCTCTTCAGCCTCAGGGTCTGCATCTTTTCTACATCCACATTCAGCATCTTCCTTTGCATCCTTGGATaGAGTTTCAACTTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: SLFSLRVCIFSTSTFSIFLCILG*SFNFLL
Trigger: CAAGAGAAAGTTGAAACTCAATCCAAGGATGCAAAG...GAAGATGCTGAATGTGGATGTAGAAAAGATGCAGACCCTGAGGCTGAAGAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS CCA 90 bp CGTATGCTATTTCTCTCTCAAGACCACATTGCAAACTGGCCCCTGTaGGATGTTGTTTCTGCCTTACAGATTGACATGTGTATGTTTGAA +
Preference number: 5 (lower is better)
Translates to: RMLFLSQDHIANWPL*DVVSALQIDMCMFE
Trigger: TTCAAACATACACATGTCAATCTGTAAGGCAGAAACAACATCCCACAGGGGCCAGTTTGCAATGTGGTCTTGAGAGAGAAATAGCATACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673667.1
ENST00000673787.1
CDS CCA 90 bp AAATGCTGGAGAGGATATGGAGAAAAGGGAACCCTTGTACTCTGTTaGCAGGAATGTAAATTAGTACAACTGCTGTGGAGAACAGTTTGG +
Preference number: 5 (lower is better)
Translates to: KCWRGYGEKGTLVLC*QECKLVQLLWRTVW
Trigger: CCAAACTGTTCTCCACAGCAGTTGTACTAATTTACATTCCTGCCAACAGAGTACAAGGGTTCCCTTTTCTCCATATCCTCTCCAGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674032.1
CDS-3UTR CAA 90 bp CGTGTGTGTCGTCTGAGCATTTGCATAATAGTAAACATCACACGTAAGTTCACACTCCTTTGTGTATCCTaGGATTTGCAGCTATGCTCC +
Preference number: 5 (lower is better)
Translates to: RVCRLSICIIVNITRKFTLLCVS*DLQLCS
Trigger: GGAGCATAGCTGCAAATCCAAGGATACACAAAGGAG...TGTGAACTTACGTGTGATGTTTACTATTATGCAAATGCTCAGACGACACACACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674141.1
CDS TCA 90 bp GTCATTTGCAACAACATGGATGGAACTGGAGATCATTATGTTCCATaGAATAAGCCAGGCACAGAAAGACAAACAGAGCATACTCTCATT +
Preference number: 5 (lower is better)
Translates to: VICNNMDGTGDHYVP*NKPGTERQTEHTLI
Trigger: AATGAGAGTATGCTCTGTTTGTCTTTCTGTGCCTGGCTTATTTCATGGAACATAATGATCTCCAGTTCCATCCATGTTGTTGCAAATGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674032.1
CDS GCA 72 bp GCCATGGGCCAGGACCCTGGGGTGCCAGGACCTGCTTaGAGCTCCCTTCTCCAGACCCTTGGGACTGGGTCC +
Preference number: 6 (lower is better)
Translates to: AMGQDPGVPGPA*SSLLQTLGTGS
Trigger: GGACCCAGTCCCAAGGGTCTGGAGAAGGGAGCTGCAAGCAGGTCCTGGCACCCCAGGGTCCTGGCCCATGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS GCA 72 bp CTGAGCCATGGGCCAGGACCCTGGGGTGCCAGGACCTaGTTGCAGCTCCCTTCTCCAGACCCTTGGGACTGG +
Preference number: 6 (lower is better)
Translates to: LSHGPGPWGART*LQLPSPDPWDW
Trigger: CCAGTCCCAAGGGTCTGGAGAAGGGAGCTGCAAGCAGGTCCTGGCACCCCAGGGTCCTGGCCCATGGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS GCA 72 bp GAGGGGCTGGCAGGCAGGTGGCCTGTGAGACAGATGTaGCCCAGTCCCACAGGGAAGGTGGCCCTGCTTTCT +
Preference number: 6 (lower is better)
Translates to: EGLAGRWPVRQM*PSPTGKVALLS
Trigger: AGAAAGCAGGGCCACCTTCCCTGTGGGACTGGGGCACATCTGTCTCACAGGCCACCTGCCTGCCAGCCCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS CAA 90 bp GTAATCCTGAGCCATGGGCCAGGACCCTGGGGTGCCAGGACCTGCTaGCAGCTCCCTTCTCCAGACCCTTGGGACTGGGTCCCAGGTGCA +
Preference number: 6 (lower is better)
Translates to: VILSHGPGPWGARTC*QLPSPDPWDWVPGA
Trigger: TGCACCTGGGACCCAGTCCCAAGGGTCTGGAGAAGGGAGCTGCAAGCAGGTCCTGGCACCCCAGGGTCCTGGCCCATGGCTCAGGATTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS GCA 72 bp CTAGGTAATCCTGAGCCATGGGCCAGGACCCTGGGGTaGCAGGACCTGCTTGCAGCTCCCTTCTCCAGACCC +
Preference number: 6 (lower is better)
Translates to: LGNPEPWARTLG*QDLLAAPFSRP
Trigger: GGGTCTGGAGAAGGGAGCTGCAAGCAGGTCCTGGCACCCCAGGGTCCTGGCCCATGGCTCAGGATTACCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS CAA 90 bp ACCCTGGGGTGCCAGGACCTGCTTGCAGCTCCCTTCTCCAGACCCTaGGGACTGGGTCCCAGGTGCACTATAGGATCTGAAGGGCTCCCA +
Preference number: 6 (lower is better)
Translates to: TLGCQDLLAAPFSRP*GLGPRCTIGSEGLP
Trigger: TGGGAGCCCTTCAGATCCTATAGTGCACCTGGGACCCAGTCCCAAGGGTCTGGAGAAGGGAGCTGCAAGCAGGTCCTGGCACCCCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS CCA 72 bp AGGTGGCCAGGCCGGTCAGCCAACTTGGCTGGGTTCTaGAAGGGTCTAGTCCATGGGCTCCCACCATATCCC +
Preference number: 6 (lower is better)
Translates to: RWPGRSANLAGF*KGLVHGLPPYP
Trigger: GGGATATGGTGGGAGCCCATGGACTAGACCCTTCCAGAACCCAGCCAAGTTGGCTGACCGGCCTGGCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS TCA 72 bp GGAGGGGGAGACACCAGGGTCCATGACCCCATGGCATaGGGACATGATTGTGGAGCCGCTCTCTTGCTGTCC +
Preference number: 6 (lower is better)
Translates to: GGGDTRVHDPMA*GHDCGAALLLS
Trigger: GGACAGCAAGAGAGCGGCTCCACAATCATGTCCTCATGCCATGGGGTCATGGACCCTGGTGTCTCCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674032.1
CDS GCA 72 bp AGGCTGGGCAGTGGAGCTATGCTGTATACAGGCTTCTaGAGGGTGGCCAGGCAGAAGACTTGGGAGGGGCTG +
Preference number: 6 (lower is better)
Translates to: RLGSGAMLYTGF*RVARQKTWEGL
Trigger: CAGCCCCTCCCAAGTCTTCTGCCTGGCCACCCTGCAGAAGCCTGTATACAGCATAGCTCCACTGCCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS GCA 72 bp GGTGGCACAAAGCACCCAGGCTGGGCAGTGGAGCTATaGTGTATACAGGCTTCTGCAGGGTGGCCAGGCAGA +
Preference number: 6 (lower is better)
Translates to: GGTKHPGWAVEL*CIQASAGWPGR
Trigger: TCTGCCTGGCCACCCTGCAGAAGCCTGTATACAGCATAGCTCCACTGCCCAGCCTGGGTGCTTTGTGCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS GCA 72 bp GCTCCCTTCTCCAGACCCTTGGGACTGGGTCCCAGGTaGACTATAGGATCTGAAGGGCTCCCAGGCTTCCAG +
Preference number: 6 (lower is better)
Translates to: APFSRPLGLGPR*TIGSEGLPGFQ
Trigger: CTGGAAGCCTGGGAGCCCTTCAGATCCTATAGTGCACCTGGGACCCAGTCCCAAGGGTCTGGAGAAGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS CCA 72 bp GCAGTGGAGCTATGCTGTATACAGGCTTCTGCAGGGTaGCCAGGCAGAAGACTTGGGAGGGGCTGGCAGGCA +
Preference number: 6 (lower is better)
Translates to: AVELCCIQASAG*PGRRLGRGWQA
Trigger: TGCCTGCCAGCCCCTCCCAAGTCTTCTGCCTGGCCACCCTGCAGAAGCCTGTATACAGCATAGCTCCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS CCA 72 bp GGGGTCCTCCCCAACTTGAGTGCAGAGCACAGATCCTaGCTAGGTAATCCTGAGCCATGGGCCAGGACCCTG +
Preference number: 6 (lower is better)
Translates to: GVLPNLSAEHRS*LGNPEPWARTL
Trigger: CAGGGTCCTGGCCCATGGCTCAGGATTACCTAGCCAGGATCTGTGCTCTGCACTCAAGTTGGGGAGGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS CCA 72 bp AAAGCGGAGGGGGAGACACCAGGGTCCATGACCCCATaGCATGAGGACATGATTGTGGAGCCGCTCTCTTGC +
Preference number: 6 (lower is better)
Translates to: KAEGETPGSMTP*HEDMIVEPLSC
Trigger: GCAAGAGAGCGGCTCCACAATCATGTCCTCATGCCATGGGGTCATGGACCCTGGTGTCTCCCCCTCCGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674032.1
CDS CAA 90 bp AGGGGAATGTGGCATTTGTGGAGGTGGCCAGGCCGGTCAGCCAACTaGGCTGGGTTCTGGAAGGGTCTAGTCCATGGGCTCCCACCATAT +
Preference number: 6 (lower is better)
Translates to: RGMWHLWRWPGRSAN*AGFWKGLVHGLPPY
Trigger: ATATGGTGGGAGCCCATGGACTAGACCCTTCCAGAACCCAGCCAAGTTGGCTGACCGGCCTGGCCACCTCCACAAATGCCACATTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS CAA 90 bp AACCTGGGAGGCGGAGTTGGCAGTGAGCTGAGATCTCGTCACTGCTaGGGTGACAAGGGTGAAACTCCTTTCCTCAGACACCGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: NLGGGVGSELRSRHC*GDKGETPFLRHRWR
Trigger: CCTCCAGCGGTGTCTGAGGAAAGGAGTTTCACCCTTGTCACCCAAGCAGTGACGAGATCTCAGCTCACTGCCAACTCCGCCTCCCAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673907.1
CDS CCA 72 bp TCTGAAGGGCTCCCAGGCTTCCAGAATGCACTTAGGTaGCACAAAGCACCCAGGCTGGGCAGTGGAGCTATG +
Preference number: 6 (lower is better)
Translates to: SEGLPGFQNALR*HKAPRLGSGAM
Trigger: CATAGCTCCACTGCCCAGCCTGGGTGCTTTGTGCCACCTAAGTGCATTCTGGAAGCCTGGGAGCCCTTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS CAA 72 bp TGCCAGGACCTGCTTGCAGCTCCCTTCTCCAGACCCTaGGGACTGGGTCCCAGGTGCACTATAGGATCTGAA +
Preference number: 6 (lower is better)
Translates to: CQDLLAAPFSRP*GLGPRCTIGSE
Trigger: TTCAGATCCTATAGTGCACCTGGGACCCAGTCCCAAGGGTCTGGAGAAGGGAGCTGCAAGCAGGTCCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS CCA 72 bp GGAACCACAGATTCCCACACCTTCATTCCCGAGGGGTaGGTGAGGGGGTGTCTACATGCTCCTTCTCAAGCA +
Preference number: 6 (lower is better)
Translates to: GTTDSHTFIPEG*VRGCLHAPSQA
Trigger: TGCTTGAGAAGGAGCATGTAGACACCCCCTCACCCACCCCTCGGGAATGAAGGTGTGGGAATCTGTGGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS CCA 72 bp AGTCCCACAGGGAAGGTGGCCCTGCTTTCTCCCCAGTaGTTAGCTAGGGCCAGAGACTGTCAAAGGGAGATA +
Preference number: 6 (lower is better)
Translates to: SPTGKVALLSPQ*LARARDCQREI
Trigger: TATCTCCCTTTGACAGTCTCTGGCCCTAGCTAACCACTGGGGAGAAAGCAGGGCCACCTTCCCTGTGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS CAA 72 bp CCCAGCTACTTGGGAGGCTGTGACAAGGAGAATCACTaGAACCTGGGAGGCGGAGTTGGCAGTGAGCTGAGA +
Preference number: 6 (lower is better)
Translates to: PSYLGGCDKENH*NLGGGVGSELR
Trigger: TCTCAGCTCACTGCCAACTCCGCCTCCCAGGTTCAAGTGATTCTCCTTGTCACAGCCTCCCAAGTAGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673907.1
CDS TCA 72 bp TCCTGCCTCTGCCACTTGGTAGCGGTGACACCTTGGTaGCTTTCTGGGCACCATTTCTGCCTCCATTTGCTC +
Preference number: 6 (lower is better)
Translates to: SCLCHLVAVTPW*LSGHHFCLHLL
Trigger: GAGCAAATGGAGGCAGAAATGGTGCCCAGAAAGTCACCAAGGTGTCACCGCTACCAAGTGGCAGAGGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673667.1
ENST00000673787.1
CDS TCA 72 bp ACATCCACCTACCAGCTCAAATGTCCGTGGCGCGTGTaGGGTCTCCAGTCTCCAAGTCCCTTCACTTACCCT +
Preference number: 6 (lower is better)
Translates to: TSTYQLKCPWRV*GLQSPSPFTYP
Trigger: AGGGTAAGTGAAGGGACTTGGAGACTGGAGACCTCACACGCGCCACGGACATTTGAGCTGGTAGGTGGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS GCA 72 bp AAGGATCAATCAGCACCTTCAAATTCCAGCCCTCACTaGTGCCAAGACAGGGCACCACGTTCTCGCGCTCAC +
Preference number: 6 (lower is better)
Translates to: KDQSAPSNSSPH*CQDRAPRSRAH
Trigger: GTGAGCGCGAGAACGTGGTGCCCTGTCTTGGCAGCAGTGAGGGCTGGAATTTGAAGGTGCTGATTGATCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS CCA 72 bp ATGTTTGAACAGAGGCCGGCCAGCATGGGGTCACACTaGCTTCAGTTAACCTGGGTTCCAATCCTGCCTCTG +
Preference number: 6 (lower is better)
Translates to: MFEQRPASMGSH*LQLTWVPILPL
Trigger: CAGAGGCAGGATTGGAACCCAGGTTAACTGAAGCCAGTGTGACCCCATGCTGGCCGGCCTCTGTTCAAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673667.1
ENST00000673787.1
CDS CCA 72 bp CCAAGTCCCTTCACTTACCCTTTCCTCAGACACCGCTaGAGGCCAGGAAGCAGCCTTAGCATTCAGTTACCC +
Preference number: 6 (lower is better)
Translates to: PSPFTYPFLRHR*RPGSSLSIQLP
Trigger: GGGTAACTGAATGCTAAGGCTGCTTCCTGGCCTCCAGCGGTGTCTGAGGAAAGGGTAAGTGAAGGGACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS CAA 72 bp GGCGGAGTTGGCAGTGAGCTGAGATCTCGTCACTGCTaGGGTGACAAGGGTGAAACTCCTTTCCTCAGACAC +
Preference number: 6 (lower is better)
Translates to: GGVGSELRSRHC*GDKGETPFLRH
Trigger: GTGTCTGAGGAAAGGAGTTTCACCCTTGTCACCCAAGCAGTGACGAGATCTCAGCTCACTGCCAACTCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673907.1
CDS CAA 90 bp ACCTGGGTTCCAATCCTGCCTCTGCCACTTGGTAGCGGTGACACCTaGGTGACTTTCTGGGCACCATTTCTGCCTCCATTTGCTCATCTG +
Preference number: 6 (lower is better)
Translates to: TWVPILPLPLGSGDT*VTFWAPFLPPFAHL
Trigger: CAGATGAGCAAATGGAGGCAGAAATGGTGCCCAGAAAGTCACCAAGGTGTCACCGCTACCAAGTGGCAGAGGCAGGATTGGAACCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673787.1
CDS TCA 72 bp GCCATGCCTGTGGCAGCTCTGTCTCTGTCTAATCTCTaGAGACATCCACCTACCAGCTCAAATGTCCGTGGC +
Preference number: 6 (lower is better)
Translates to: AMPVAALSLSNL*RHPPTSSNVRG
Trigger: GCCACGGACATTTGAGCTGGTAGGTGGATGTCTTCAGAGATTAGACAGAGACAGAGCTGCCACAGGCATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS TCA 72 bp ACCAGGTCCACTCCTGGGGACTGGGGGAGCCATCTCTaGTCGCTGGCACTTTGCCAGCAATTCCAATTATTT +
Preference number: 6 (lower is better)
Translates to: TRSTPGDWGSHL*SLALCQQFQLF
Trigger: AAATAATTGGAATTGCTGGCAAAGTGCCAGCGATCAGAGATGGCTCCCCCAGTCCCCAGGAGTGGACCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS GCA 72 bp GATCAATCAGCACCTTCAAATTCCAGCCCTCACTGCTaGCAAGACAGGGCACCACGTTCTCGCGCTCACAAA +
Preference number: 6 (lower is better)
Translates to: DQSAPSNSSPHC*QDRAPRSRAHK
Trigger: TTTGTGAGCGCGAGAACGTGGTGCCCTGTCTTGGCAGCAGTGAGGGCTGGAATTTGAAGGTGCTGATTGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS GCA 72 bp CCAAAGCTGTCCCTAGCACAAAGGTTCCTGGCGCCATaGCTGTGGCAGCTCTGTCTCTGTCTAATCTCTGAA +
Preference number: 6 (lower is better)
Translates to: PKLSLAQRFLAP*LWQLCLCLISE
Trigger: TTCAGAGATTAGACAGAGACAGAGCTGCCACAGGCATGGCGCCAGGAACCTTTGTGCTAGGGACAGCTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS CCA 72 bp AGCCAACTTGGCTGGGTTCTGGAAGGGTCTAGTCCATaGGCTCCCACCATATCCCAGGTGATTCTATCTGCT +
Preference number: 6 (lower is better)
Translates to: SQLGWVLEGSSP*APTISQVILSA
Trigger: AGCAGATAGAATCACCTGGGATATGGTGGGAGCCCATGGACTAGACCCTTCCAGAACCCAGCCAAGTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS CCA 72 bp CTGTCCCTAGCACAAAGGTTCCTGGCGCCATGCCTGTaGCAGCTCTGTCTCTGTCTAATCTCTGAAGACATC +
Preference number: 6 (lower is better)
Translates to: LSLAQRFLAPCL*QLCLCLISEDI
Trigger: GATGTCTTCAGAGATTAGACAGAGACAGAGCTGCCACAGGCATGGCGCCAGGAACCTTTGTGCTAGGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS CCA 72 bp CCAGTGCAATTCACCCTTCTCAGTTTTCTGGGAGTGTaGGGTCCTCCCCAACTTGAGTGCAGAGCACAGATC +
Preference number: 6 (lower is better)
Translates to: PVQFTLLSFLGV*GPPQLECRAQI
Trigger: GATCTGTGCTCTGCACTCAAGTTGGGGAGGACCCCACACTCCCAGAAAACTGAGAAGGGTGAATTGCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS CCA 72 bp TCCTTTGTGTATCCTTGGATTTGCAGCTATGCTCTGTaGTACAAGGGGGAGAGAGGTGACCCCCTCACCAGG +
Preference number: 6 (lower is better)
Translates to: SFVYPWICSYAL*YKGERGDPLTR
Trigger: CCTGGTGAGGGGGTCACCTCTCTCCCCCTTGTACCACAGAGCATAGCTGCAAATCCAAGGATACACAAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS CAA 90 bp ACCTGGGTTCCAATCCTGCCTCTGCCACTTGGTAGCGGTGACACCTaGGTGACTTTCTGGGCACCATTTCTGCCTCCATTTGCTCATCTT +
Preference number: 6 (lower is better)
Translates to: TWVPILPLPLGSGDT*VTFWAPFLPPFAHL
Trigger: AAGATGAGCAAATGGAGGCAGAAATGGTGCCCAGAAAGTCACCAAGGTGTCACCGCTACCAAGTGGCAGAGGCAGGATTGGAACCCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS GCA 72 bp TCCATGGGCTCCCACCATATCCCAGGTGATTCTATCTaGTCAGAGTTCACAGGAACCACAGATTCCCACACC +
Preference number: 6 (lower is better)
Translates to: SMGSHHIPGDSI*SEFTGTTDSHT
Trigger: GGTGTGGGAATCTGTGGTTCCTGTGAACTCTGAGCAGATAGAATCACCTGGGATATGGTGGGAGCCCATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS CCA 72 bp CTGCCACTTGGTAGCGGTGACACCTTGGTGACTTTCTaGGCACCATTTCTGCCTCCATTTGCTCATCTGTCT +
Preference number: 6 (lower is better)
Translates to: LPLGSGDTLVTF*APFLPPFAHLS
Trigger: AGACAGATGAGCAAATGGAGGCAGAAATGGTGCCCAGAAAGTCACCAAGGTGTCACCGCTACCAAGTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673787.1
CDS CAA 90 bp GGACAAACAAAATGCACGTGCCTGCATGTGTGTGTCTGTGTGTGCTaGTGCATGTCTGTGTGCATGCCTATGTGTGTCTCTCTGTGCTCG +
Preference number: 6 (lower is better)
Translates to: GQTKCTCLHVCVCVC*CMSVCMPMCVSLCS
Trigger: CGAGCACAGAGAGACACACATAGGCATGCACACAGACATGCACAAGCACACACAGACACACACATGCAGGCACGTGCATTTTGTTTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS GCA 72 bp GTTCTCGCGCTCACAAAGACGATCCTGCACCAGAGCTaGATGAACAGGGCTTTCACCTTTTCATTTGCTCAC +
Preference number: 6 (lower is better)
Translates to: VLALTKTILHQS*MNRAFTFSFAH
Trigger: GTGAGCAAATGAAAAGGTGAAAGCCCTGTTCATGCAGCTCTGGTGCAGGATCGTCTTTGTGAGCGCGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS GCA 72 bp ACTTGGCAGCATGGCTCCTTTGTGTATCCTTGGATTTaGAGCTATGCTCTGTGGTACAAGGGGGAGAGAGGT +
Preference number: 6 (lower is better)
Translates to: TWQHGSFVYPWI*SYALWYKGERG
Trigger: ACCTCTCTCCCCCTTGTACCACAGAGCATAGCTGCAAATCCAAGGATACACAAAGGAGCCATGCTGCCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS CCA 72 bp GTGTCTGGATCTCACACAGGATGCATTCACAGGGGCTaGGGTGGAAGGATCAATCAGCACCTTCAAATTCCA +
Preference number: 6 (lower is better)
Translates to: VSGSHTGCIHRG*GGRINQHLQIP
Trigger: TGGAATTTGAAGGTGCTGATTGATCCTTCCACCCCAGCCCCTGTGAATGCATCCTGTGTGAGATCCAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS CCA 72 bp GCTCTTACTTGGCAGCATGGCTCCTTTGTGTATCCTTaGATTTGCAGCTATGCTCTGTGGTACAAGGGGGAG +
Preference number: 6 (lower is better)
Translates to: ALTWQHGSFVYP*ICSYALWYKGE
Trigger: CTCCCCCTTGTACCACAGAGCATAGCTGCAAATCCAAGGATACACAAAGGAGCCATGCTGCCAAGTAAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS CAA 72 bp TACTTGGCAGCATGGCTCCTTTGTGTATCCTTGGATTaGCAGCTATGCTCTGTGGTACAAGGGGGAGAGAGG +
Preference number: 6 (lower is better)
Translates to: YLAAWLLCVSLD*QLCSVVQGGER
Trigger: CCTCTCTCCCCCTTGTACCACAGAGCATAGCTGCAAATCCAAGGATACACAAAGGAGCCATGCTGCCAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS CAA 72 bp GGCTCTTACTTGGCAGCATGGCTCCTTTGTGTATCCTaGGATTTGCAGCTATGCTCTGTGGTACAAGGGGGA +
Preference number: 6 (lower is better)
Translates to: GSYLAAWLLCVS*DLQLCSVVQGG
Trigger: TCCCCCTTGTACCACAGAGCATAGCTGCAAATCCAAGGATACACAAAGGAGCCATGCTGCCAAGTAAGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS GCA 72 bp GTGCGTGCGTATGCTATTTCTCTCTCAAGACCACATTaGAAACTGGCCCCTGTGGGATGTTGTTTCTGCCTT +
Preference number: 6 (lower is better)
Translates to: VRAYAISLSRPH*KLAPVGCCFCL
Trigger: AAGGCAGAAACAACATCCCACAGGGGCCAGTTTGCAATGTGGTCTTGAGAGAGAAATAGCATACGCACGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673667.1
ENST00000673787.1
CDS GCA 72 bp ACAAAATGCACGTGCCTGCATGTGTGTGTCTGTGTGTaGTTGTGCATGTCTGTGTGCATGCCTATGTGTGTC +
Preference number: 6 (lower is better)
Translates to: TKCTCLHVCVCV*LCMSVCMPMCV
Trigger: GACACACATAGGCATGCACACAGACATGCACAAGCACACACAGACACACACATGCAGGCACGTGCATTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS GCA 72 bp CCATGGCATGAGGACATGATTGTGGAGCCGCTCTCTTaGTGTCCACAAAGTCACTGTAAAAGCAAAGTGCCA +
Preference number: 6 (lower is better)
Translates to: PWHEDMIVEPLS*CPQSHCKSKVP
Trigger: TGGCACTTTGCTTTTACAGTGACTTTGTGGACAGCAAGAGAGCGGCTCCACAATCATGTCCTCATGCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674032.1
CDS CCA 72 bp ACGACCTTAGAGGGACAGCATCACCTGCAGTTTCTATaGCAGAGATTCCATAGTAGGTTGAACACTGCTCCC +
Preference number: 6 (lower is better)
Translates to: TTLEGQHHLQFL*QRFHSRLNTAP
Trigger: GGGAGCAGTGTTCAACCTACTATGGAATCTCTGCCATAGAAACTGCAGGTGATGCTGTCCCTCTAAGGTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674032.1
CDS CAA 72 bp ATGTTGTTTCTGCCTTACAGATTGACATGTGTATGTTaGAACAGAGGCCGGCCAGCATGGGGTCACACTGGC +
Preference number: 6 (lower is better)
Translates to: MLFLPYRLTCVC*NRGRPAWGHTG
Trigger: GCCAGTGTGACCCCATGCTGGCCGGCCTCTGTTCAAACATACACATGTCAATCTGTAAGGCAGAAACAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673667.1
ENST00000673787.1
CDS CAA 72 bp GGTGTCTACATGCTCCTTCTCAAGCACAGCTGTCATTaGTTCCAGCTTTGTCTCCCCATCCTGAATCCAGCA +
Preference number: 6 (lower is better)
Translates to: GVYMLLLKHSCH*FQLCLPILNPA
Trigger: TGCTGGATTCAGGATGGGGAGACAAAGCTGGAACAAATGACAGCTGTGCTTGAGAAGGAGCATGTAGACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS CAA 72 bp ATGGAAGACGGGCTCTTACTTGGCAGCATGGCTCCTTaGTGTATCCTTGGATTTGCAGCTATGCTCTGTGGT +
Preference number: 6 (lower is better)
Translates to: MEDGLLLGSMAP*CILGFAAMLCG
Trigger: ACCACAGAGCATAGCTGCAAATCCAAGGATACACAAAGGAGCCATGCTGCCAAGTAAGAGCCCGTCTTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674055.1
CDS GCA 72 bp AATCAATGGCTGCTTGCAGGACAAACAAAATGCACGTaGCTGCATGTGTGTGTCTGTGTGTGCTTGTGCATG +
Preference number: 6 (lower is better)
Translates to: NQWLLAGQTKCT*LHVCVCVCLCM
Trigger: CATGCACAAGCACACACAGACACACACATGCAGGCACGTGCATTTTGTTTGTCCTGCAAGCAGCCATTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS CCA 72 bp TTTTCAGTGAGGGCCTTTTTGCTCATTGGTCATGACTaGTGTCAGGCAACCCTTGGAAATTTCCTCACGACC +
Preference number: 6 (lower is better)
Translates to: FSVRAFLLIGHD*CQATLGNFLTT
Trigger: GGTCGTGAGGAAATTTCCAAGGGTTGCCTGACACCAGTCATGACCAATGAGCAAAAAGGCCCTCACTGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674032.1
CDS TCA 72 bp ACCTGCAGTTTCTATGGCAGAGATTCCATAGTAGGTTaGACACTGCTCCCCCAAATACACGTCTTCCTGGAA +
Preference number: 6 (lower is better)
Translates to: TCSFYGRDSIVG*TLLPQIHVFLE
Trigger: TTCCAGGAAGACGTGTATTTGGGGGAGCAGTGTTCAACCTACTATGGAATCTCTGCCATAGAAACTGCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674032.1
CDS TCA 72 bp GATCATGCCCTTTTCTGTGCTTGGATGGCTGAACTATaGAATGCCAGGTTGACATATTCAGTGCTTCCAGGA +
Preference number: 6 (lower is better)
Translates to: DHALFCAWMAEL*NARLTYSVLPG
Trigger: TCCTGGAAGCACTGAATATGTCAACCTGGCATTTCATAGTTCAGCCATCCAAGCACAGAAAAGGGCATGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS GCA 72 bp TGTGTGTGTGCGTGTGTATGTGTGTGTACACATACATaGATGTGTGCGTGCGTATGCTATTTCTCTCTCAAG +
Preference number: 6 (lower is better)
Translates to: CVCACVCVCTHT*MCACVCYFSLK
Trigger: CTTGAGAGAGAAATAGCATACGCACGCACACATGCATGTATGTGTACACACACATACACACGCACACACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673667.1
ENST00000673787.1
CDS CCA 72 bp TTTCTCTCTCAAGACCACATTGCAAACTGGCCCCTGTaGGATGTTGTTTCTGCCTTACAGATTGACATGTGT +
Preference number: 6 (lower is better)
Translates to: FLSQDHIANWPL*DVVSALQIDMC
Trigger: ACACATGTCAATCTGTAAGGCAGAAACAACATCCCACAGGGGCCAGTTTGCAATGTGGTCTTGAGAGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673667.1
ENST00000673787.1
CDS CCA 72 bp CGTATGCTATTTCTCTCTCAAGACCACATTGCAAACTaGCCCCTGTGGGATGTTGTTTCTGCCTTACAGATT +
Preference number: 6 (lower is better)
Translates to: RMLFLSQDHIAN*PLWDVVSALQI
Trigger: AATCTGTAAGGCAGAAACAACATCCCACAGGGGCCAGTTTGCAATGTGGTCTTGAGAGAGAAATAGCATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673667.1
ENST00000673787.1
CDS CAA 90 bp TATTTCTCTCTCAAGACCACATTGCAAACTGGCCCCTGTGGGATGTaGTTTCTGCCTTACAGATTGACATGTGTATGTTTGAACAGAGGC +
Preference number: 6 (lower is better)
Translates to: YFSLKTTLQTGPCGM*FLPYRLTCVCLNRG
Trigger: GCCTCTGTTCAAACATACACATGTCAATCTGTAAGGCAGAAACAACATCCCACAGGGGCCAGTTTGCAATGTGGTCTTGAGAGAGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673667.1
ENST00000673787.1
CDS CCA 72 bp TTTCATTTGCTCACTCATTCCTTCCATCAGAATCAATaGCTGCTTGCAGGACAAACAAAATGCACGTGCCTG +
Preference number: 6 (lower is better)
Translates to: FHLLTHSFHQNQ*LLAGQTKCTCL
Trigger: CAGGCACGTGCATTTTGTTTGTCCTGCAAGCAGCCATTGATTCTGATGGAAGGAATGAGTGAGCAAATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673667.1
CDS TCA 72 bp AACAACATGGATGGAACTGGAGATCATTATGTTCCATaGAATAAGCCAGGCACAGAAAGACAAACAGAGCAT +
Preference number: 6 (lower is better)
Translates to: NNMDGTGDHYVP*NKPGTERQTEH
Trigger: ATGCTCTGTTTGTCTTTCTGTGCCTGGCTTATTTCATGGAACATAATGATCTCCAGTTCCATCCATGTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674032.1
CDS CCA 72 bp ATAAAAGGCTACATATTGAGTAGAGTGTACACTGCTTaGGTGACAGGTTCACTAAAATCTCAGAAATCAACA +
Preference number: 6 (lower is better)
Translates to: IKGYILSRVYTA*VTGSLKSQKST
Trigger: TGTTGATTTCTGAGATTTTAGTGAACCTGTCACCCAAGCAGTGTACACTCTACTCAATATGTAGCCTTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674032.1
CDS CCA 72 bp ATTGTTTATAACCCAAAGGAGAAATGCTTGAGGAGATaGAAATTCTCCATGATGTGCGTATTTCATATTGTA +
Preference number: 6 (lower is better)
Translates to: IVYNPKEKCLRR*KFSMMCVFHIV
Trigger: TACAATATGAAATACGCACATCATGGAGAATTTCCATCTCCTCAAGCATTTCTCCTTTGGGTTATAAACAAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674032.1
CDS CAA 72 bp GGCACAGAAAGACAAACAGAGCATACTCTCATTTATTaGTGGGATCTAAAAATCATAACAAGTGAATTCATG +
Preference number: 6 (lower is better)
Translates to: GTERQTEHTLIY*WDLKIITSEFM
Trigger: CATGAATTCACTTGTTATGATTTTTAGATCCCACAAATAAATGAGAGTATGCTCTGTTTGTCTTTCTGTGCC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674032.1