Pregenerated sensors for TCP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000120438Ensembl transcript IDs: ENST00000321394.12, ENST00000536394.1, ENST00000536807.1, ENST00000537390.5, ENST00000546023.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTTGTGACCCTGTTACACACACTGGAGAGAATGGGCAGAAGTCGTaGTGTTGCAGCCCTGTGCATTGGGGGTGGGATGGGAATAGCAAT | + |
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Preference number: 1 (lower is better) Translates to: SCDPVTHTGENGQKS*CCSPVHWGWDGNSN Trigger: ATTGCTATTCCCATCCCACCCCCAATGCACAGGGCTGCAACACCACGACTTCTGCCCATTCTCTCCAGTGTGTGTAACAGGGTCACAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| 3UTR-3UTR GCA 90 bp | AGCATCTGGCTGTCGAATTCTTGTGACCCTGTTACACACACTGGAGAGAATGGGGGTGTTGCAGCCCTGTaGATTGGGGGTGGGATGGGA | + |
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Preference number: 2 (lower is better) Translates to: SIWLSNSCDPVTHTGENGGVAAL*IGGGMG Trigger: TCCCATCCCACCCCCAATGCACAGGGCTGCAACACC...CCCATTCTCTCCAGTGTGTGTAACAGGGTCACAAGAATTCGACAGCCAGATGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| 3UTR-3UTR CCA 90 bp | AATTCTTGTGACCCTGTTACACACACTGGAGAGAATGGGCAGAAGTCGTGGTGTTGCAGCCCTGTGCATTaGGGGTGGGATGGGAATAGC | + |
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Preference number: 2 (lower is better) Translates to: NSCDPVTHTGENGQKSWCCSPVH*GWDGNS Trigger: GCTATTCCCATCCCACCCCCAATGCACAGGGCTGCA...ACACCACGACTTCTGCCCATTCTCTCCAGTGTGTGTAACAGGGTCACAAGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| 3UTR-3UTR TCA 90 bp | TCGAATTCTTGTGACCCTGTTACACACACTGGAGAGAATGGGCAGAAGTCGTGGCTAGGTTGCAATATGTaGAATCAGAGGACCAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: SNSCDPVTHTGENGQKSWLGCNM*NQRTKV Trigger: TACTTTGGTCCTCTGATTTCACATATTGCAACCTAG...CCACGACTTCTGCCCATTCTCTCCAGTGTGTGTAACAGGGTCACAAGAATTCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| 3UTR-3UTR CCA 90 bp | AATTCTTGTGACCCTGTTACACACACTGGAGAGAATGGGCAGAAGTCGTGGTGTGGACCAAAGTACAGATaGAAACCATTTCCTACATCA | + |
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Preference number: 2 (lower is better) Translates to: NSCDPVTHTGENGQKSWCGPKYR*KPFPTS Trigger: TGATGTAGGAAATGGTTTCCATCTGTACTTTGGTCC...ACACCACGACTTCTGCCCATTCTCTCCAGTGTGTGTAACAGGGTCACAAGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| 3UTR GCA 72 bp | GAGAGAATGGGCAGAAGTCGTGGTGTTGCAGCCCTGTaGATTGGGGGTGGGATGGGAATAGCAATGTGTGTT | + |
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Preference number: 3 (lower is better) Translates to: ERMGRSRGVAAL*IGGGMGIAMCV Trigger: AACACACATTGCTATTCCCATCCCACCCCCAATGCACAGGGCTGCAACACCACGACTTCTGCCCATTCTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| 3UTR CCA 72 bp | AGGGGCTATAGCCTTGGGCCACCCTCTTGGAGCATCTaGCTGTCGAATTCTTGTGACCCTGTTACACACACT | + |
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Preference number: 3 (lower is better) Translates to: RGYSLGPPSWSI*LSNSCDPVTHT Trigger: AGTGTGTGTAACAGGGTCACAAGAATTCGACAGCCAGATGCTCCAAGAGGGTGGCCCAAGGCTATAGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| 3UTR TCA 72 bp | GCCACCCTCTTGGAGCATCTGGCTGTCGAATTCTTGTaGCCCTGTTACACACACTGGAGAGAATGGGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: ATLLEHLAVEFL*PCYTHWREWAE Trigger: TTCTGCCCATTCTCTCCAGTGTGTGTAACAGGGTCACAAGAATTCGACAGCCAGATGCTCCAAGAGGGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| CDS-3UTR TCA 90 bp | CTTGTGACCCTGTTACACACACTGGAGAGAATGGGCAGAAGTCGTGGTGTTGCAAAGGCCCCTCCATCTTaGCGGCAGCGATACACGTCG | + |
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Preference number: 4 (lower is better) Translates to: LVTLLHTLERMGRSRGVAKAPPS*RQRYTS Trigger: CGACGTGTATCGCTGCCGTCAAGATGGAGGGGCCTT...TGCAACACCACGACTTCTGCCCATTCTCTCCAGTGTGTGTAACAGGGTCACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| CDS-3UTR GCA 90 bp | CTTGTGACCCTGTTACACACACTGGAGAGAATGGGCAGAAGTCGTGGTGTTGCAGGTGTTGCAGCCCTGTaGATTGGGGGTGGGATGGGA | + |
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Preference number: 4 (lower is better) Translates to: LVTLLHTLERMGRSRGVAGVAAL*IGGGMG Trigger: TCCCATCCCACCCCCAATGCACAGGGCTGCAACACC...TGCAACACCACGACTTCTGCCCATTCTCTCCAGTGTGTGTAACAGGGTCACAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| CDS-3UTR CCA 90 bp | ACACTGGAGAGAATGGGCAGAAGTCGTGGTGTTGCAGCCCTGTGCATTGGGGGTAATGGGCAGAAGTCGTaGTGTTGCAGCCCTGTGCAT | + |
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Preference number: 4 (lower is better) Translates to: TLERMGRSRGVAALCIGGNGQKS*CCSPVH Trigger: ATGCACAGGGCTGCAACACCACGACTTCTGCCCATT...ACCCCCAATGCACAGGGCTGCAACACCACGACTTCTGCCCATTCTCTCCAGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| CDS-3UTR CCA 90 bp | GGCTATAGCCTTGGGCCACCCTCTTGGAGCATCTGGCTGTCGAATTCTTGTGACCTTGGGCCACCCTCTTaGAGCATCTGGCTGTCGAAT | + |
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Preference number: 4 (lower is better) Translates to: GYSLGPPSWSIWLSNSCDLGPPS*SIWLSN Trigger: ATTCGACAGCCAGATGCTCCAAGAGGGTGGCCCAAG...GTCACAAGAATTCGACAGCCAGATGCTCCAAGAGGGTGGCCCAAGGCTATAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| CDS-3UTR CCA 90 bp | TCTTGTGACCCTGTTACACACACTGGAGAGAATGGGCAGAAGTCGTGGTGTTGCTGCAGCCCTGTGCATTaGGGGTGGGATGGGAATAGC | + |
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Preference number: 4 (lower is better) Translates to: SCDPVTHTGENGQKSWCCCSPVH*GWDGNS Trigger: GCTATTCCCATCCCACCCCCAATGCACAGGGCTGCA...GCAACACCACGACTTCTGCCCATTCTCTCCAGTGTGTGTAACAGGGTCACAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| CDS-3UTR GCA 90 bp | AATTCTTGTGACCCTGTTACACACACTGGAGAGAATGGGCAGAAGTCGTGGTGTGGATCGTTTCCCCAGTaGTGCGGTCACCGAACACGG | + |
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Preference number: 4 (lower is better) Translates to: NSCDPVTHTGENGQKSWCGSFPQ*CGHRTR Trigger: CCGTGTTCGGTGACCGCAGCACTGGGGAAACGATCC...ACACCACGACTTCTGCCCATTCTCTCCAGTGTGTGTAACAGGGTCACAAGAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| CDS-3UTR GCA 90 bp | AATTCTTGTGACCCTGTTACACACACTGGAGAGAATGGGCAGAAGTCGTGGTGTCAGAAGTCGTGGTGTTaGAGCCCTGTGCATTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: NSCDPVTHTGENGQKSWCQKSWC*SPVHWG Trigger: CCCCCAATGCACAGGGCTGCAACACCACGACTTCTG...ACACCACGACTTCTGCCCATTCTCTCCAGTGTGTGTAACAGGGTCACAAGAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| CDS-3UTR CCA 90 bp | CACACTGGAGAGAATGGGCAGAAGTCGTGGTGTTGCAGCCCTGTGCATTGGGGGGGACCAAAGTACAGATaGAAACCATTTCCTACATCA | + |
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Preference number: 4 (lower is better) Translates to: HTGENGQKSWCCSPVHWGGPKYR*KPFPTS Trigger: TGATGTAGGAAATGGTTTCCATCTGTACTTTGGTCC...CCCCCAATGCACAGGGCTGCAACACCACGACTTCTGCCCATTCTCTCCAGTGTG 51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| CDS-3UTR TCA 90 bp | AGCATCTGGCTGTCGAATTCTTGTGACCCTGTTACACACACTGGAGAGAATGGGGAAAGGGTAGCATGCTaGTACATTAAGAGGAAAAAG | + |
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Preference number: 4 (lower is better) Translates to: SIWLSNSCDPVTHTGENGERVAC*YIKRKK Trigger: CTTTTTCCTCTTAATGTATCAGCATGCTACCCTTTC...CCCATTCTCTCCAGTGTGTGTAACAGGGTCACAAGAATTCGACAGCCAGATGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| CDS-3UTR TCA 90 bp | GCAATATGTGAAATCAGAGGACCAAAGTACAGATGGAAACCATTTCCTACATCAGCTGTCGAATTCTTGTaGCCCTGTTACACACACTGG | + |
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Preference number: 4 (lower is better) Translates to: AICEIRGPKYRWKPFPTSAVEFL*PCYTHW Trigger: CCAGTGTGTGTAACAGGGTCACAAGAATTCGACAGC...TGATGTAGGAAATGGTTTCCATCTGTACTTTGGTCCTCTGATTTCACATATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| CDS-3UTR CCA 90 bp | GCAATATGTGAAATCAGAGGACCAAAGTACAGATGGAAACCATTTCCTACATCACCCTGTTACACACACTaGAGAGAATGGGCAGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: AICEIRGPKYRWKPFPTSPCYTH*REWAEV Trigger: GACTTCTGCCCATTCTCTCCAGTGTGTGTAACAGGG...TGATGTAGGAAATGGTTTCCATCTGTACTTTGGTCCTCTGATTTCACATATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| CDS-3UTR CCA 90 bp | GCAATATGTGAAATCAGAGGACCAAAGTACAGATGGAAACCATTTCCTACATCACCCTCTTGGAGCATCTaGCTGTCGAATTCTTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: AICEIRGPKYRWKPFPTSPSWSI*LSNSCD Trigger: GTCACAAGAATTCGACAGCCAGATGCTCCAAGAGGG...TGATGTAGGAAATGGTTTCCATCTGTACTTTGGTCCTCTGATTTCACATATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| CDS-3UTR CCA 90 bp | GGAAACCATTTCCTACATCACAAAAACCCAAGTTTACAGCTTGTACTTTACTTTCCTGTGCATTGGGGGTaGGATGGGAATAGCAATGTG | + |
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Preference number: 4 (lower is better) Translates to: GNHFLHHKNPSLQLVLYFPVHWG*DGNSNV Trigger: CACATTGCTATTCCCATCCCACCCCCAATGCACAGG...AAAGTAAAGTACAAGCTGTAAACTTGGGTTTTTGTGATGTAGGAAATGGTTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| CDS-3UTR TCA 90 bp | GGAAACCATTTCCTACATCACAAAAACCCAAGTTTACAGCTTGTACTTTACTTTCCGTTAGGTCAATATTaGAGGAGGGGCTATAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GNHFLHHKNPSLQLVLYFPLGQY*RRGYSL Trigger: AAGGCTATAGCCCCTCCTTCAATATTGACCTAACGG...AAAGTAAAGTACAAGCTGTAAACTTGGGTTTTTGTGATGTAGGAAATGGTTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| CDS-3UTR TCA 90 bp | ATATGTGAAATCAGAGGACCAAAGTACAGATGGAAACCATTTCCTACATCACAACTAGGTTGCAATATGTaGAATCAGAGGACCAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: ICEIRGPKYRWKPFPTSQLGCNM*NQRTKV Trigger: TACTTTGGTCCTCTGATTTCACATATTGCAACCTAG...TTGTGATGTAGGAAATGGTTTCCATCTGTACTTTGGTCCTCTGATTTCACATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| CDS GCA 90 bp | AACCCGGATACGGCTGGACGCCGGACGCCCGACCTCGACTGCAGCTaGGGGCGGACAGGGCACCGGGCTCATCCGAGGGCGCGCGGATGG | + |
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Preference number: 5 (lower is better) Translates to: NPDTAGRRTPDLDCS*GRTGHRAHPRARGW Trigger: CCATCCGCGCGCCCTCGGATGAGCCCGGTGCCCTGTCCGCCCGCAGCTGCAGTCGAGGTCGGGCGTCCGGCGTCCAGCCGTATCCGGGTT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546023.1 |
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| CDS GCA 90 bp | GCTGTCAACCCGGATACGGCTGGACGCCGGACGCCCGACCTCGACTaGAGCTGCGGGCGGACAGGGCACCGGGCTCATCCGAGGGCGCGC | + |
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Preference number: 5 (lower is better) Translates to: AVNPDTAGRRTPDLD*SCGRTGHRAHPRAR Trigger: GCGCGCCCTCGGATGAGCCCGGTGCCCTGTCCGCCCGCAGCTGCAGTCGAGGTCGGGCGTCCGGCGTCCAGCCGTATCCGGGTTGACAGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546023.1 |
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| CDS CCA 90 bp | TCCTGGGCTAACTCTACTGTAAGAAGCTGTCAACCCGGATACGGCTaGACGCCGGACGCCCGACCTCGACTGCAGCTGCGGGCGGACAGG | + |
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Preference number: 5 (lower is better) Translates to: SWANSTVRSCQPGYG*TPDARPRLQLRADR Trigger: CCTGTCCGCCCGCAGCTGCAGTCGAGGTCGGGCGTCCGGCGTCCAGCCGTATCCGGGTTGACAGCTTCTTACAGTAGAGTTAGCCCAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546023.1 |
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| CDS-3UTR CAA 90 bp | CACACTGGAGAGAATGGGCAGAAGTCGTGGTGTTGCAGCCCTGTGCATTGGGGGGGAGGGGCTATAGCCTaGGGCCACCCTCTTGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: HTGENGQKSWCCSPVHWGGGAIA*GHPLGA Trigger: TGCTCCAAGAGGGTGGCCCAAGGCTATAGCCCCTCC...CCCCCAATGCACAGGGCTGCAACACCACGACTTCTGCCCATTCTCTCCAGTGTG 61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| CDS-3UTR CAA 90 bp | CTTGTGACCCTGTTACACACACTGGAGAGAATGGGCAGAAGTCGTGGTGTTGCACCTTGGGCCACCCTCTaGGAGCATCTGGCTGTCGAA | + |
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Preference number: 5 (lower is better) Translates to: LVTLLHTLERMGRSRGVAPWATL*EHLAVE Trigger: TTCGACAGCCAGATGCTCCAAGAGGGTGGCCCAAGG...TGCAACACCACGACTTCTGCCCATTCTCTCCAGTGTGTGTAACAGGGTCACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| CDS CCA 90 bp | GACCTGTGCTTGGAGAATGCAGTGAGCTATGATGGCACTCTCGTCTaGGCGACAGGTGGGACCCTGTCCCTAAACAAAGCGAGCCTATTT | + |
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Preference number: 5 (lower is better) Translates to: DLCLENAVSYDGTLV*ATGGTLSLNKASLF Trigger: AAATAGGCTCGCTTTGTTTAGGGACAGGGTCCCACCTGTCGCCCAGACGAGAGTGCCATCATAGCTCACTGCATTCTCCAAGCACAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546023.1 |
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| CDS-3UTR CAA 90 bp | TCTTGTGACCCTGTTACACACACTGGAGAGAATGGGCAGAAGTCGTGGTGTTGCAAAGGCCCCTCCATCTaGACGGCAGCGATACACGTC | + |
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Preference number: 5 (lower is better) Translates to: SCDPVTHTGENGQKSWCCKGPSI*TAAIHV Trigger: GACGTGTATCGCTGCCGTCAAGATGGAGGGGCCTTT...GCAACACCACGACTTCTGCCCATTCTCTCCAGTGTGTGTAACAGGGTCACAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| CDS-3UTR CAA 90 bp | ATATGTGAAATCAGAGGACCAAAGTACAGATGGAAACCATTTCCTACATCACAAGCAGAAGTCGTGGTGTaGCAGCCCTGTGCATTGGGG | + |
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Preference number: 5 (lower is better) Translates to: ICEIRGPKYRWKPFPTSQAEVVV*QPCALG Trigger: CCCCAATGCACAGGGCTGCAACACCACGACTTCTGC...TTGTGATGTAGGAAATGGTTTCCATCTGTACTTTGGTCCTCTGATTTCACATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321394.12 |
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| CDS GCA 72 bp | ACGGCTGGACGCCGGACGCCCGACCTCGACTGCAGCTaGGGGCGGACAGGGCACCGGGCTCATCCGAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: TAGRRTPDLDCS*GRTGHRAHPRA Trigger: CGCCCTCGGATGAGCCCGGTGCCCTGTCCGCCCGCAGCTGCAGTCGAGGTCGGGCGTCCGGCGTCCAGCCGT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546023.1 |
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| CDS GCA 72 bp | CCGGATACGGCTGGACGCCGGACGCCCGACCTCGACTaGAGCTGCGGGCGGACAGGGCACCGGGCTCATCCG | + |
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Preference number: 6 (lower is better) Translates to: PDTAGRRTPDLD*SCGRTGHRAHP Trigger: CGGATGAGCCCGGTGCCCTGTCCGCCCGCAGCTGCAGTCGAGGTCGGGCGTCCGGCGTCCAGCCGTATCCGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546023.1 |
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| CDS GCA 72 bp | CTGAAACAAAAGGGGGTGCGAGGCGTGGCCCGCACGTaGGAGCCCGGGAGGCCCGCTTTCCCGCGGAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: LKQKGVRGVART*EPGRPAFPRRA Trigger: CGCCCTCCGCGGGAAAGCGGGCCTCCCGGGCTCGCACGTGCGGGCCACGCCTCGCACCCCCTTTTGTTTCAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546023.1 |
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| CDS GCA 72 bp | CCTCCTCGCTGTGGGAAAAGTGGGGCCACAGCGCCCTaGCCCAGAGAACGGCGGGTGGGCTGGGTCCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PPRCGKSGATAP*PRERRVGWVRL Trigger: CAGCCGGACCCAGCCCACCCGCCGTTCTCTGGGGCAGGGCGCTGTGGCCCCACTTTTCCCACAGCGAGGAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546023.1 |
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| CDS CCA 72 bp | AACTCTACTGTAAGAAGCTGTCAACCCGGATACGGCTaGACGCCGGACGCCCGACCTCGACTGCAGCTGCGG | + |
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Preference number: 6 (lower is better) Translates to: NSTVRSCQPGYG*TPDARPRLQLR Trigger: CCGCAGCTGCAGTCGAGGTCGGGCGTCCGGCGTCCAGCCGTATCCGGGTTGACAGCTTCTTACAGTAGAGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546023.1 |
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| CDS CCA 72 bp | CGTCTCCTGGGGTCAATGCACTCGAGTGGCGTTTCCTaGGCTAACTCTACTGTAAGAAGCTGTCAACCCGGA | + |
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Preference number: 6 (lower is better) Translates to: RLLGSMHSSGVS*ANSTVRSCQPG Trigger: TCCGGGTTGACAGCTTCTTACAGTAGAGTTAGCCCAGGAAACGCCACTCGAGTGCATTGACCCCAGGAGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546023.1 |
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| CDS CCA 72 bp | AGGTGGGACCCTGTCCCTAAACAAAGCGAGCCTATTTaGCACAGCTTTGATGCGGGGTGGAATCTGATGGCG | + |
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Preference number: 6 (lower is better) Translates to: RWDPVPKQSEPI*HSFDAGWNLMA Trigger: CGCCATCAGATTCCACCCCGCATCAAAGCTGTGCCAAATAGGCTCGCTTTGTTTAGGGACAGGGTCCCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546023.1 |
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| CDS CCA 72 bp | TTGGAGAATGCAGTGAGCTATGATGGCACTCTCGTCTaGGCGACAGGTGGGACCCTGTCCCTAAACAAAGCG | + |
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Preference number: 6 (lower is better) Translates to: LENAVSYDGTLV*ATGGTLSLNKA Trigger: CGCTTTGTTTAGGGACAGGGTCCCACCTGTCGCCCAGACGAGAGTGCCATCATAGCTCACTGCATTCTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546023.1 |
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| CDS GCA 72 bp | GGCAATCGAAGCTGCAGCCATAACAATTTCATGCTCTaGCACTTCGTACAGCTATACCAGCCTTTTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: GNRSCSHNNFML*HFVQLYQPFPS Trigger: TGAAGGAAAAGGCTGGTATAGCTGTACGAAGTGGCAGAGCATGAAATTGTTATGGCTGCAGCTTCGATTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536394.1 ENST00000537390.5 |
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| CDS CAA 72 bp | CCATTTCTACGCCAAAAGTTAAGGACAGTAACAGGTTaGGAATGGACAAAGGGTACACACGTGAAAAATCAA | + |
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Preference number: 6 (lower is better) Translates to: PFLRQKLRTVTG*EWTKGTHVKNQ Trigger: TTGATTTTTCACGTGTGTACCCTTTGTCCATTCCAAACCTGTTACTGTCCTTAACTTTTGGCGTAGAAATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000536807.1 |
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