RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TCOF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000070814

Ensembl transcript IDs: ENST00000323668.11, ENST00000377797.7, ENST00000394269.7, ENST00000427724.7, ENST00000439160.6, ENST00000445265.6, ENST00000504761.6, ENST00000506063.1, ENST00000506630.1, ENST00000506767.1, ENST00000513346.5, ENST00000513538.2, ENST00000514442.5, ENST00000515035.5, ENST00000515516.1, ENST00000643257.2, ENST00000643812.1, ENST00000646961.1, ENST00000650162.1, ENST00000674413.1

Found 701 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCCCTCCACGTCTGTCTCATCACTGGAGCTGGAGGTGTCCTCGCTaGAGCTGTCGGCCTGGCCCGCTGACACCATCCCAGGCTTGGCAG +
Preference number: 1 (lower is better)
Translates to: SPPRLSHHWSWRCPR*SCRPGPLTPSQAWQ
Trigger: CTGCCAAGCCTGGGATGGTGTCAGCGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGACAGACGTGGAGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643812.1
3UTR TCA 90 bp CCCAAGCTCACCCCACTTGAAGGCTGGGTCCTGGCAACAGGAGGCTaGGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGGGCAGCCTGG +
Preference number: 1 (lower is better)
Translates to: PKLTPLEGWVLATGG*ASLAFWARTFRAAW
Trigger: CCAGGCTGCCCTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCTGTTGCCAGGACCCAGCCTTCAAGTGGGGTGAGCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR CCA 90 bp CCCCACTTGAAGGCTGGGTCCTGGCAACAGGAGGCTGAGCCTCACTaGCTTTCTGGGCGAGGACCTTCAGGGCAGCCTGGGTCAGTGGGA +
Preference number: 1 (lower is better)
Translates to: PHLKAGSWQQEAEPH*LSGRGPSGQPGSVG
Trigger: TCCCACTGACCCAGGCTGCCCTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCTGTTGCCAGGACCCAGCCTTCAAGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR CCA 90 bp TCCGACTGGACTCCTTGCTGCTGCTGGCCCCAGCCATGCTGGCTTTaGGGGCTATTCTTGGGTGGGCAGTGGGCATGGTCACCACATTGG +
Preference number: 1 (lower is better)
Translates to: SDWTPCCCWPQPCWL*GLFLGGQWAWSPHW
Trigger: CCAATGTGGTGACCATGCCCACTGCCCACCCAAGAATAGCCCCCAAAGCCAGCATGGCTGGGGCCAGCAGCAGCAAGGAGTCCAGTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR CCA 90 bp CTGATATCCGACTGGACTCCTTGCTGCTGCTGGCCCCAGCCATGCTaGCTTTGGGGGCTATTCTTGGGTGGGCAGTGGGCATGGTCACCA +
Preference number: 1 (lower is better)
Translates to: LISDWTPCCCWPQPC*LWGLFLGGQWAWSP
Trigger: TGGTGACCATGCCCACTGCCCACCCAAGAATAGCCCCCAAAGCCAGCATGGCTGGGGCCAGCAGCAGCAAGGAGTCCAGTCGGATATCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR CCA 90 bp GTTTTACTGAGGGTTTCCCCTCCACGTCTGTCTCATCACTGGAGCTaGAGGTGTCCTCGCTGGAGCTGTCGGCCTGGCCCGCTGACACCA +
Preference number: 1 (lower is better)
Translates to: VLLRVSPPRLSHHWS*RCPRWSCRPGPLTP
Trigger: TGGTGTCAGCGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGACAGACGTGGAGGGGAAACCCTCAGTAAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643812.1
3UTR GCA 90 bp CATCTGATATCCGACTGGACTCCTTGCTGCTGCTGGCCCCAGCCATaGTGGCTTTGGGGGCTATTCTTGGGTGGGCAGTGGGCATGGTCA +
Preference number: 1 (lower is better)
Translates to: HLISDWTPCCCWPQP*WLWGLFLGGQWAWS
Trigger: TGACCATGCCCACTGCCCACCCAAGAATAGCCCCCAAAGCCAGCATGGCTGGGGCCAGCAGCAGCAAGGAGTCCAGTCGGATATCAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR CCA 90 bp GCCAGGGTTCACACAGAAGCTTGGACCACACCAGCATGGCTGACTTaGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCC +
Preference number: 1 (lower is better)
Translates to: ARVHTEAWTTPAWLT*ASGVQEDKVGLVPP
Trigger: GGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTCTGTGTGAACCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR CCA 90 bp CTCTGGTCTGGAGGTTGCAGAACTCCAGGATCTGTGGTTAGGCCCTaGGACAGGGGAGCTGGTGCTCTGAGGTGCCTGGCAGAAGCTTCT +
Preference number: 1 (lower is better)
Translates to: LWSGGCRTPGSVVRP*DRGAGALRCLAEAS
Trigger: AGAAGCTTCTGCCAGGCACCTCAGAGCACCAGCTCCCCTGTCCCAGGGCCTAACCACAGATCCTGGAGTTCTGCAACCTCCAGACCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR CCA 90 bp CCTGTTTCTTGCCATCTGATATCCGACTGGACTCCTTGCTGCTGCTaGCCCCAGCCATGCTGGCTTTGGGGGCTATTCTTGGGTGGGCAG +
Preference number: 1 (lower is better)
Translates to: PVSCHLISDWTPCCC*PQPCWLWGLFLGGQ
Trigger: CTGCCCACCCAAGAATAGCCCCCAAAGCCAGCATGGCTGGGGCCAGCAGCAGCAAGGAGTCCAGTCGGATATCAGATGGCAAGAAACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR GCA 90 bp GTCCCTCCTGTTTCTTGCCATCTGATATCCGACTGGACTCCTTGCTaGTGCTGGCCCCAGCCATGCTGGCTTTGGGGGCTATTCTTGGGT +
Preference number: 1 (lower is better)
Translates to: VPPVSCHLISDWTPC*CWPQPCWLWGLFLG
Trigger: ACCCAAGAATAGCCCCCAAAGCCAGCATGGCTGGGGCCAGCAGCAGCAAGGAGTCCAGTCGGATATCAGATGGCAAGAAACAGGAGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR GCA 90 bp CTGGTCCCTCCTGTTTCTTGCCATCTGATATCCGACTGGACTCCTTaGTGCTGCTGGCCCCAGCCATGCTGGCTTTGGGGGCTATTCTTG +
Preference number: 1 (lower is better)
Translates to: LVPPVSCHLISDWTP*CCWPQPCWLWGLFL
Trigger: CAAGAATAGCCCCCAAAGCCAGCATGGCTGGGGCCAGCAGCAGCAAGGAGTCCAGTCGGATATCAGATGGCAAGAAACAGGAGGGACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR GCA 90 bp ATATTCAAGGGGAGGTGGTTCATGAGACCGCTCTGGTCTGGAGGTTaGAGAACTCCAGGATCTGTGGTTAGGCCCTGGGACAGGGGAGCT +
Preference number: 1 (lower is better)
Translates to: IFKGRWFMRPLWSGG*RTPGSVVRPWDRGA
Trigger: AGCTCCCCTGTCCCAGGGCCTAACCACAGATCCTGGAGTTCTGCAACCTCCAGACCAGAGCGGTCTCATGAACCACCTCCCCTTGAATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR GCA 90 bp CTGGGTTCTTCTTTGACACCTGAGTGGCTGGTCCCTCCTGTTTCTTaGCATCTGATATCCGACTGGACTCCTTGCTGCTGCTGGCCCCAG +
Preference number: 1 (lower is better)
Translates to: LGSSLTPEWLVPPVS*HLISDWTPCCCWPQ
Trigger: CTGGGGCCAGCAGCAGCAAGGAGTCCAGTCGGATATCAGATGGCAAGAAACAGGAGGGACCAGCCACTCAGGTGTCAAAGAAGAACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR CCA 90 bp TCCTGGGAGACTTCCCAGAAAGAAGGTTGGCCACCGTCTTCCCAGTaGCAGGGTGTGGCATGGAATTCCCAGTCTTGCCAGCTTTCTCTG +
Preference number: 1 (lower is better)
Translates to: SWETSQKEGWPPSSQ*QGVAWNSQSCQLSL
Trigger: CAGAGAAAGCTGGCAAGACTGGGAATTCCATGCCACACCCTGCCACTGGGAAGACGGTGGCCAACCTTCTTTCTGGGAAGTCTCCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
3UTR TCA 90 bp TGGTGGTGGTTGTTCTTTACTTTTGTAATCTGTGCCATTGGAAAGTaGGAGGCAGTGAGCACCCTATTGCTGGAGGTGTGCAAACAGCAT +
Preference number: 1 (lower is better)
Translates to: WWWLFFTFVICAIGK*EAVSTLLLEVCKQH
Trigger: ATGCTGTTTGCACACCTCCAGCAATAGGGTGCTCACTGCCTCTCACTTTCCAATGGCACAGATTACAAAAGTAAAGAACAACCACCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513538.2
3UTR-3UTR CCA 90 bp GCAGGGCCACGCCTGCACCTTCTACGCTCCGTGGGCTTGCTTCCCCTGGCTCCCCAGCCATGCTGGCTTTaGGGGCTATTCTTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: AGPRLHLLRSVGLLPLAPQPCWL*GLFLGG
Trigger: CCCACCCAAGAATAGCCCCCAAAGCCAGCATGGCTG...GGGAGCCAGGGGAAGCAAGCCCACGGAGCGTAGAAGGTGCAGGCGTGGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR-3UTR CCA 90 bp GCAGGGCCACGCCTGCACCTTCTACGCTCCGTGGGCTTGCTTCCCCTGGCTCCCTGGCCCCAGCCATGCTaGCTTTGGGGGCTATTCTTG +
Preference number: 2 (lower is better)
Translates to: AGPRLHLLRSVGLLPLAPWPQPC*LWGLFL
Trigger: CAAGAATAGCCCCCAAAGCCAGCATGGCTGGGGCCA...GGGAGCCAGGGGAAGCAAGCCCACGGAGCGTAGAAGGTGCAGGCGTGGCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR-3UTR CCA 90 bp AGGGCCACGCCTGCACCTTCTACGCTCCGTGGGCTTGCTTCCCCTGGCTCCCCAGCCTCACTGGCTTTCTaGGCGAGGACCTTCAGGGCA +
Preference number: 2 (lower is better)
Translates to: RATPAPSTLRGLASPGSPASLAF*ARTFRA
Trigger: TGCCCTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGC...TGGGGAGCCAGGGGAAGCAAGCCCACGGAGCGTAGAAGGTGCAGGCGTGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR-3UTR GCA 90 bp CCTGGCAACAGGAGGCTGAGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGGGCGACTGGACTCCTTGCTaGTGCTGGCCCCAGCCATGC +
Preference number: 2 (lower is better)
Translates to: PGNRRLSLTGFLGEDLQGDWTPC*CWPQPC
Trigger: GCATGGCTGGGGCCAGCAGCAGCAAGGAGTCCAGTC...GCCCTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCTGTTGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR-3UTR CCA 90 bp CTGTCTCATCACTGGAGCTGGAGGTGTCCTCGCTGGAGCTGTCGGCCTGGCCCGACACCATCCCAGGCTTaGCAGCAGCTCCAAAGGCCG +
Preference number: 2 (lower is better)
Translates to: LSHHWSWRCPRWSCRPGPTPSQA*QQLQRP
Trigger: CGGCCTTTGGAGCTGCTGCCAAGCCTGGGATGGTGT...CGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
3UTR-3UTR TCA 90 bp AGGGCCACGCCTGCACCTTCTACGCTCCGTGGGCTTGCTTCCCCTGGCTCCCCAAGCTGGGTTCTTCTTTaGCACCTGAGTGGCTGGTCC +
Preference number: 2 (lower is better)
Translates to: RATPAPSTLRGLASPGSPSWVLL*HLSGWS
Trigger: GGACCAGCCACTCAGGTGTCAAAGAAGAACCCAGCT...TGGGGAGCCAGGGGAAGCAAGCCCACGGAGCGTAGAAGGTGCAGGCGTGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR-3UTR TCA 90 bp GCAGGGCCACGCCTGCACCTTCTACGCTCCGTGGGCTTGCTTCCCCTGGCTCCCTCACCACATTGGTTCTaGTGCCAGGAGTCAAGCACT +
Preference number: 2 (lower is better)
Translates to: AGPRLHLLRSVGLLPLAPSPHWF*CQESST
Trigger: AGTGCTTGACTCCTGGCATCAGAACCAATGTGGTGA...GGGAGCCAGGGGAAGCAAGCCCACGGAGCGTAGAAGGTGCAGGCGTGGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR CAA 90 bp ATCCGACTGGACTCCTTGCTGCTGCTGGCCCCAGCCATGCTGGCTTaGGGGGCTATTCTTGGGTGGGCAGTGGGCATGGTCACCACATTG +
Preference number: 2 (lower is better)
Translates to: IRLDSLLLLAPAMLA*GAILGWAVGMVTTL
Trigger: CAATGTGGTGACCATGCCCACTGCCCACCCAAGAATAGCCCCCAAAGCCAGCATGGCTGGGGCCAGCAGCAGCAAGGAGTCCAGTCGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR-3UTR GCA 90 bp CTGGAGGTGTCCTCGCTGGAGCTGTCGGCCTGGCCCGCTGACACCATCCCAGGCTGGCTTTTTCTTTCATaGTTGATGGCAAGTCCGCCC +
Preference number: 2 (lower is better)
Translates to: LEVSSLELSAWPADTIPGWLFLS*LMASPP
Trigger: GGGCGGACTTGCCATCAAGCATGAAAGAAAAAGCCA...GCCTGGGATGGTGTCAGCGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643812.1
3UTR-3UTR CCA 90 bp AGGAGGCTGAGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGGGCAGCCTGGGTTTTGGGGGCTATTCTTaGGTGGGCAGTGGGCATGGT +
Preference number: 2 (lower is better)
Translates to: RRLSLTGFLGEDLQGSLGFGGYS*VGSGHG
Trigger: ACCATGCCCACTGCCCACCCAAGAATAGCCCCCAAA...ACCCAGGCTGCCCTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR-3UTR TCA 90 bp CTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTATGCCACAGGTGCTTaGGAGAGGGTCCTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: LGPLEYRKIRWAWSHPWRYATGA*ERVLGR
Trigger: TCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATA...CCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR-3UTR TCA 90 bp CTGTCTCATCACTGGAGCTGGAGGTGTCCTCGCTGGAGCTGTCGGCCTGGCCCGTTTTTCTTTCATGCTTaGTGGCAAGTCCGCCCCCAG +
Preference number: 2 (lower is better)
Translates to: LSHHWSWRCPRWSCRPGPFFFHA*WQVRPQ
Trigger: CTGGGGGCGGACTTGCCATCAAGCATGAAAGAAAAA...CGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643812.1
3UTR-3UTR CCA 90 bp GCCACTGAGGCCGAGGGAGGCAAACCAAGTGCAGAGGTCATGGGGCAGATGAGTTTGAAGGCTGGGTCCTaGCAACAGGAGGCTGAGCCT +
Preference number: 2 (lower is better)
Translates to: ATEAEGGKPSAEVMGQMSLKAGS*QQEAEP
Trigger: AGGCTCAGCCTCCTGTTGCCAGGACCCAGCCTTCAA...ACTCATCTGCCCCATGACCTCTGCACTTGGTTTGCCTCCCTCGGCCTCAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR-3UTR GCA 90 bp AGGAGGCTGAGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGGGCAGCCTGGGTGTCCCTCCTGTTTCTTaGCATCTGATATCCGACTGG +
Preference number: 2 (lower is better)
Translates to: RRLSLTGFLGEDLQGSLGVPPVS*HLISDW
Trigger: CCAGTCGGATATCAGATGGCAAGAAACAGGAGGGAC...ACCCAGGCTGCCCTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR-3UTR CCA 90 bp AGGGTAATGCTGTCTGATGGAAGGGCCAGGGTTCACACAGAAGCTTGGACCACAGCCTGGTCCCACCCTTaGAGGTGTAGCCTGAGCAGG +
Preference number: 2 (lower is better)
Translates to: RVMLSDGRARVHTEAWTTAWSHP*RCSLSR
Trigger: CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGC...TGTGGTCCAAGCTTCTGTGTGAACCCTGGCCCTTCCATCAGACAGCATTACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR-3UTR TCA 90 bp ACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTTGGAGGTGTAGCCTaGGCAGGACTGTGGCTTAAG +
Preference number: 2 (lower is better)
Translates to: TTPAWLTWASGVQEDKVGLGGVA*AGLWLK
Trigger: CTTAAGCCACAGTCCTGCTCAGGCTACACCTCCAAG...GCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR-3UTR GCA 90 bp CTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGGAGCACATGAAGGTATaGCACAGGTGCTTGAGAGAG +
Preference number: 2 (lower is better)
Translates to: LGPLEYRKIRWAWSHPWREHMKV*HRCLRE
Trigger: CTCTCTCAAGCACCTGTGGCATACCTTCATGTGCTC...CCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR-3UTR CCA 90 bp GCCACTGAGGCCGAGGGAGGCAAACCAAGTGCAGAGGTCATGGGGCAGATGAGTTCTTTGACACCTGAGTaGCTGGTCCCTCCTGTTTCT +
Preference number: 2 (lower is better)
Translates to: ATEAEGGKPSAEVMGQMSSLTPE*LVPPVS
Trigger: AGAAACAGGAGGGACCAGCCACTCAGGTGTCAAAGA...ACTCATCTGCCCCATGACCTCTGCACTTGGTTTGCCTCCCTCGGCCTCAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR-3UTR TCA 90 bp AGGGTAATGCTGTCTGATGGAAGGGCCAGGGTTCACACAGAAGCTTGGACCACATATGCCACAGGTGCTTaGGAGAGGGTCCTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: RVMLSDGRARVHTEAWTTYATGA*ERVLGR
Trigger: TCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATA...TGTGGTCCAAGCTTCTGTGTGAACCCTGGCCCTTCCATCAGACAGCATTACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR-3UTR TCA 90 bp GCCACTGAGGCCGAGGGAGGCAAACCAAGTGCAGAGGTCATGGGGCAGATGAGTCTGTTTCTTGCCATCTaGTATCCGACTGGACTCCTT +
Preference number: 2 (lower is better)
Translates to: ATEAEGGKPSAEVMGQMSLFLAI*YPTGLL
Trigger: AAGGAGTCCAGTCGGATATCAGATGGCAAGAAACAG...ACTCATCTGCCCCATGACCTCTGCACTTGGTTTGCCTCCCTCGGCCTCAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR-3UTR GCA 90 bp CACAGAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAGGCTTAAGCTCTGGGTaGAGTGGAGCACATGAAGGT +
Preference number: 2 (lower is better)
Translates to: HRSLDHTSMADLGLWSTGGLSSG*SGAHEG
Trigger: ACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCC...TCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR-3UTR GCA 90 bp ACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCGGCTTAAGCTCTGGGTaGAGTGGAGCACATGAAGGT +
Preference number: 2 (lower is better)
Translates to: TTPAWLTWASGVQEDKVGGLSSG*SGAHEG
Trigger: ACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCC...GCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR-3UTR GCA 90 bp GTGAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATGGACAGGGGAGCTGGTaGTCTGAGGTGCCTGGCAGA +
Preference number: 2 (lower is better)
Translates to: VSTLLLEVCKQHLTLLMNGQGSW*SEVPGR
Trigger: TCTGCCAGGCACCTCAGAGCACCAGCTCCCCTGTCC...ATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR-3UTR CCA 90 bp GGTTCTTCTTTGACACCTGAGTGGCTGGTCCCTCCTGTTTCTTGCCATCTGATAGGGGCTATTCTTGGGTaGGCAGTGGGCATGGTCACC +
Preference number: 2 (lower is better)
Translates to: GSSLTPEWLVPPVSCHLIGAILG*AVGMVT
Trigger: GGTGACCATGCCCACTGCCCACCCAAGAATAGCCCC...TATCAGATGGCAAGAAACAGGAGGGACCAGCCACTCAGGTGTCAAAGAAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR-3UTR CCA 90 bp GCCCCCAGGACTGAGGAGTTGGTAGATGCTAGTCTTGGGGCTAGTATGATCTCAGCAGACTCAGGAAGCTaGGCATGGTGGTATGTGCAT +
Preference number: 2 (lower is better)
Translates to: APRTEELVDASLGASMISADSGS*AWWYVH
Trigger: ATGCACATACCACCATGCCCAGCTTCCTGAGTCTGC...TGAGATCATACTAGCCCCAAGACTAGCATCTACCAACTCCTCAGTCCTGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643812.1
3UTR-3UTR CCA 90 bp TCTGAGACCAACGTAGTATTTGCTGAGGGCTCTGCTGACTTCCTGGGAGACTTCTGGCAGGGTGTGGCATaGAATTCCCAGTCTTGCCAG +
Preference number: 2 (lower is better)
Translates to: SETNVVFAEGSADFLGDFWQGVA*NSQSCQ
Trigger: CTGGCAAGACTGGGAATTCCATGCCACACCCTGCCA...GAAGTCTCCCAGGAAGTCAGCAGAGCCCTCAGCAAATACTACGTTGGTCTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
3UTR-3UTR CCA 90 bp GTTTCTGAGACCAACGTAGTATTTGCTGAGGGCTCTGCTGACTTCCTGGGAGACTCCCAGAAAGAAGGTTaGCCACCGTCTTCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: VSETNVVFAEGSADFLGDSQKEG*PPSSQW
Trigger: CCACTGGGAAGACGGTGGCCAACCTTCTTTCTGGGA...GTCTCCCAGGAAGTCAGCAGAGCCCTCAGCAAATACTACGTTGGTCTCAGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
3UTR-3UTR CCA 90 bp GTTGTTCTTTACTTTTGTAATCTGTGCCATTGGAAAGTGAGAGGCAGTGAGCACCTGGGACAGGGGAGCTaGTGCTCTGAGGTGCCTGGC +
Preference number: 2 (lower is better)
Translates to: VVLYFCNLCHWKVRGSEHLGQGS*CSEVPG
Trigger: GCCAGGCACCTCAGAGCACCAGCTCCCCTGTCCCAG...GTGCTCACTGCCTCTCACTTTCCAATGGCACAGATTACAAAAGTAAAGAACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR-3UTR CCA 90 bp GTGAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATCCAGCATGGCTGACTTaGGCCTCTGGAGTACAGGAA +
Preference number: 2 (lower is better)
Translates to: VSTLLLEVCKQHLTLLMNPAWLT*ASGVQE
Trigger: TTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGG...ATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR-3UTR CCA 90 bp GAGACCAACGTAGTATTTGCTGAGGGCTCTGCTGACTTCCTGGGAGACTTCCCATCAGGAAGCTGGGCATaGTGGTATGTGCATGGAATT +
Preference number: 2 (lower is better)
Translates to: ETNVVFAEGSADFLGDFPSGSWA*WYVHGI
Trigger: AATTCCATGCACATACCACCATGCCCAGCTTCCTGA...TGGGAAGTCTCCCAGGAAGTCAGCAGAGCCCTCAGCAAATACTACGTTGGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
3UTR-3UTR TCA 90 bp GCCGCCTTTCTTGCTGGAGACTCCTTAGTAGAAACTGATGAGGCTTTGACCTGGCTCCTCCTCAGTTTCTaGGACCAACGTAGTATTTGC +
Preference number: 2 (lower is better)
Translates to: AAFLAGDSLVETDEALTWLLLSF*DQRSIC
Trigger: GCAAATACTACGTTGGTCTCAGAAACTGAGGAGGAG...CCAGGTCAAAGCCTCATCAGTTTCTACTAAGGAGTCTCCAGCAAGAAAGGCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
3UTR-3UTR CCA 90 bp GAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGAGACCGTCTGTGGTTAGGCCCTaGGACAGGGGAGCTGGTGCT +
Preference number: 2 (lower is better)
Translates to: ELITMWYVIFKGRWFMRPSVVRP*DRGAGA
Trigger: AGCACCAGCTCCCCTGTCCCAGGGCCTAACCACAGA...CGGTCTCATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR-3UTR TCA 90 bp GAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGAGACCGCTTGGAGGTGTAGCCTaGGCAGGACTGTGGCTTAAG +
Preference number: 2 (lower is better)
Translates to: ELITMWYVIFKGRWFMRPLGGVA*AGLWLK
Trigger: CTTAAGCCACAGTCCTGCTCAGGCTACACCTCCAAG...CGGTCTCATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR-3UTR GCA 90 bp ACTGATGAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGGCTGGTGCTCTGAGGTaGCTGGCAGAAGCTTCTGGG +
Preference number: 2 (lower is better)
Translates to: TDELITMWYVIFKGRWFMAGALR*LAEASG
Trigger: CCCAGAAGCTTCTGCCAGGCACCTCAGAGCACCAGC...CATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTCATCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR-3UTR CCA 90 bp GTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATGTGATAGCCTGGTCCCACCCTTaGAGGTGTAGCCTGAGCAGG +
Preference number: 2 (lower is better)
Translates to: VQTASDLTDELITMWYVIAWSHP*RCSLSR
Trigger: CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGC...TATCACATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR-3UTR CCA 90 bp GAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGAGACCGTACAGGAAGATAAGGTaGGCCTGGTCCCACCCTTGG +
Preference number: 2 (lower is better)
Translates to: ELITMWYVIFKGRWFMRPYRKIR*AWSHPW
Trigger: CCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA...CGGTCTCATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR-3UTR CCA 90 bp GTTGTTCTTTACTTTTGTAATCTGTGCCATTGGAAAGTGAGAGGCAGTGAGCACCCAGCATGGCTGACTTaGGCCTCTGGAGTACAGGAA +
Preference number: 2 (lower is better)
Translates to: VVLYFCNLCHWKVRGSEHPAWLT*ASGVQE
Trigger: TTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGG...GTGCTCACTGCCTCTCACTTTCCAATGGCACAGATTACAAAAGTAAAGAACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR-3UTR TCA 90 bp GGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATGTGCAGTGGAGCACATaGAGGTATGCCACAGGTGCT +
Preference number: 2 (lower is better)
Translates to: GGVQTASDLTDELITMWYVQWST*RYATGA
Trigger: AGCACCTGTGGCATACCTTCATGTGCTCCACTGCAC...ATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR-3UTR CCA 90 bp ACTGATGAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGGTTCACACAGAAGCTTaGACCACACCAGCATGGCTG +
Preference number: 2 (lower is better)
Translates to: TDELITMWYVIFKGRWFMVHTEA*TTPAWL
Trigger: CAGCCATGCTGGTGTGGTCCAAGCTTCTGTGTGAAC...CATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTCATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR-3UTR GCA 90 bp GTTGTTCTTTACTTTTGTAATCTGTGCCATTGGAAAGTGAGAGGCAGTGAGCACCTATTGCTGGAGGTGTaGAAACAGCATCTGACCTTA +
Preference number: 2 (lower is better)
Translates to: VVLYFCNLCHWKVRGSEHLLLEV*KQHLTL
Trigger: TAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAG...GTGCTCACTGCCTCTCACTTTCCAATGGCACAGATTACAAAAGTAAAGAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR-3UTR GCA 90 bp GTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATGTGATAGAGCACATGAAGGTATaGCACAGGTGCTTGAGAGAG +
Preference number: 2 (lower is better)
Translates to: VQTASDLTDELITMWYVIEHMKV*HRCLRE
Trigger: CTCTCTCAAGCACCTGTGGCATACCTTCATGTGCTC...TATCACATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR CCA 72 bp CTGGAGCTGGAGGTGTCCTCGCTGGAGCTGTCGGCCTaGCCCGCTGACACCATCCCAGGCTTGGCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: LELEVSSLELSA*PADTIPGLAAA
Trigger: AGCTGCTGCCAAGCCTGGGATGGTGTCAGCGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
3UTR-3UTR CAA 90 bp CTGTCTCATCACTGGAGCTGGAGGTGTCCTCGCTGGAGCTGTCGGCCTGGCCCGGACACCATCCCAGGCTaGGCAGCAGCTCCAAAGGCC +
Preference number: 3 (lower is better)
Translates to: LSHHWSWRCPRWSCRPGPDTIPG*AAAPKA
Trigger: GGCCTTTGGAGCTGCTGCCAAGCCTGGGATGGTGTC...CGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
3UTR CCA 72 bp AAGGCTGGGTCCTGGCAACAGGAGGCTGAGCCTCACTaGCTTTCTGGGCGAGGACCTTCAGGGCAGCCTGGG +
Preference number: 3 (lower is better)
Translates to: KAGSWQQEAEPH*LSGRGPSGQPG
Trigger: CCCAGGCTGCCCTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCTGTTGCCAGGACCCAGCCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR CCA 72 bp CGTCTGTCTCATCACTGGAGCTGGAGGTGTCCTCGCTaGAGCTGTCGGCCTGGCCCGCTGACACCATCCCAG +
Preference number: 3 (lower is better)
Translates to: RLSHHWSWRCPR*SCRPGPLTPSQ
Trigger: CTGGGATGGTGTCAGCGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGACAGACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
3UTR CCA 72 bp AGGGTTTCCCCTCCACGTCTGTCTCATCACTGGAGCTaGAGGTGTCCTCGCTGGAGCTGTCGGCCTGGCCCG +
Preference number: 3 (lower is better)
Translates to: RVSPPRLSHHWS*RCPRWSCRPGP
Trigger: CGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGACAGACGTGGAGGGGAAACCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643812.1
3UTR TCA 72 bp AGGGAGGCAAACCAAGTGCAGAGGTCATGGGGCAGATaGGTGCTGGTGCCGCGATGCAGGGCCACGCCTGCA +
Preference number: 3 (lower is better)
Translates to: REANQVQRSWGR*VLVPRCRATPA
Trigger: TGCAGGCGTGGCCCTGCATCGCGGCACCAGCACTCATCTGCCCCATGACCTCTGCACTTGGTTTGCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR-3UTR CAA 90 bp GCCACTGAGGCCGAGGGAGGCAAACCAAGTGCAGAGGTCATGGGGCAGATGAGTATCCGACTGGACTCCTaGCTGCTGCTGGCCCCAGCC +
Preference number: 3 (lower is better)
Translates to: ATEAEGGKPSAEVMGQMSIRLDS*LLLAPA
Trigger: GGCTGGGGCCAGCAGCAGCAAGGAGTCCAGTCGGAT...ACTCATCTGCCCCATGACCTCTGCACTTGGTTTGCCTCCCTCGGCCTCAGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR-3UTR CAA 90 bp GGTCCTGGCAACAGGAGGCTGAGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGCTTTGGGGGCTATTCTaGGGTGGGCAGTGGGCATGG +
Preference number: 3 (lower is better)
Translates to: GPGNRRLSLTGFLGEDLQLWGLF*GGQWAW
Trigger: CCATGCCCACTGCCCACCCAAGAATAGCCCCCAAAG...CTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCTGTTGCCAGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR-3UTR CAA 90 bp GGTCCTGGCAACAGGAGGCTGAGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGCCAGCCATGCTGGCTTaGGGGGCTATTCTTGGGTGG +
Preference number: 3 (lower is better)
Translates to: GPGNRRLSLTGFLGEDLQPAMLA*GAILGW
Trigger: CCACCCAAGAATAGCCCCCAAAGCCAGCATGGCTGG...CTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCTGTTGCCAGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR-3UTR CAA 90 bp GTCTCATCACTGGAGCTGGAGGTGTCCTCGCTGGAGCTGTCGGCCTGGCCCGCTCCCAGGACTGAGGAGTaGGTAGATGCTAGTCTTGGG +
Preference number: 3 (lower is better)
Translates to: VSSLELEVSSLELSAWPAPRTEE*VDASLG
Trigger: CCCAAGACTAGCATCTACCAACTCCTCAGTCCTGGG...AGCGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
3UTR-3UTR CAA 90 bp GTCTCATCACTGGAGCTGGAGGTGTCCTCGCTGGAGCTGTCGGCCTGGCCCGCTTTCCCAGAAAGAAGGTaGGCCACCGTCTTCCCAGTG +
Preference number: 3 (lower is better)
Translates to: VSSLELEVSSLELSAWPAFPERR*ATVFPV
Trigger: CACTGGGAAGACGGTGGCCAACCTTCTTTCTGGGAA...AGCGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
3UTR TCA 72 bp ACCCCACTTGAAGGCTGGGTCCTGGCAACAGGAGGCTaGGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGG +
Preference number: 3 (lower is better)
Translates to: TPLEGWVLATGG*ASLAFWARTFR
Trigger: CCTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCTGTTGCCAGGACCCAGCCTTCAAGTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR CCA 72 bp GCTGGCCCCAGCCATGCTGGCTTTGGGGGCTATTCTTaGGTGGGCAGTGGGCATGGTCACCACATTGGTTCT +
Preference number: 3 (lower is better)
Translates to: AGPSHAGFGGYS*VGSGHGHHIGS
Trigger: AGAACCAATGTGGTGACCATGCCCACTGCCCACCCAAGAATAGCCCCCAAAGCCAGCATGGCTGGGGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR TCA 72 bp CACCTGAGTGGCTGGTCCCTCCTGTTTCTTGCCATCTaGTATCCGACTGGACTCCTTGCTGCTGCTGGCCCC +
Preference number: 3 (lower is better)
Translates to: HLSGWSLLFLAI*YPTGLLAAAGP
Trigger: GGGGCCAGCAGCAGCAAGGAGTCCAGTCGGATATCAGATGGCAAGAAACAGGAGGGACCAGCCACTCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR CCA 72 bp CTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTaGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGACT +
Preference number: 3 (lower is better)
Translates to: LGPLEYRKIRWA*SHPWRCSLSRT
Trigger: AGTCCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR CCA 72 bp GCCCCAGCCATGCTGGCTTTGGGGGCTATTCTTGGGTaGGCAGTGGGCATGGTCACCACATTGGTTCTGATG +
Preference number: 3 (lower is better)
Translates to: APAMLALGAILG*AVGMVTTLVLM
Trigger: CATCAGAACCAATGTGGTGACCATGCCCACTGCCCACCCAAGAATAGCCCCCAAAGCCAGCATGGCTGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR-3UTR CAA 90 bp GCCACTGAGGCCGAGGGAGGCAAACCAAGTGCAGAGGTCATGGGGCAGATGAGTAAGCTGGGTTCTTCTTaGACACCTGAGTGGCTGGTC +
Preference number: 3 (lower is better)
Translates to: ATEAEGGKPSAEVMGQMSKLGSS*TPEWLV
Trigger: GACCAGCCACTCAGGTGTCAAAGAAGAACCCAGCTT...ACTCATCTGCCCCATGACCTCTGCACTTGGTTTGCCTCCCTCGGCCTCAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR CCA 72 bp TGCCATCTGATATCCGACTGGACTCCTTGCTGCTGCTaGCCCCAGCCATGCTGGCTTTGGGGGCTATTCTTG +
Preference number: 3 (lower is better)
Translates to: CHLISDWTPCCC*PQPCWLWGLFL
Trigger: CAAGAATAGCCCCCAAAGCCAGCATGGCTGGGGCCAGCAGCAGCAAGGAGTCCAGTCGGATATCAGATGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506767.1
3UTR CCA 72 bp CACACAGAAGCTTGGACCACACCAGCATGGCTGACTTaGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTG +
Preference number: 3 (lower is better)
Translates to: HTEAWTTPAWLT*ASGVQEDKVGL
Trigger: CAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTCTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR CCA 72 bp ACTTCCCAGAAAGAAGGTTGGCCACCGTCTTCCCAGTaGCAGGGTGTGGCATGGAATTCCCAGTCTTGCCAG +
Preference number: 3 (lower is better)
Translates to: TSQKEGWPPSSQ*QGVAWNSQSCQ
Trigger: CTGGCAAGACTGGGAATTCCATGCCACACCCTGCCACTGGGAAGACGGTGGCCAACCTTCTTTCTGGGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
3UTR TCA 72 bp GGGTTCACACAGAAGCTTGGACCACACCAGCATGGCTaGCTTGGGCCTCTGGAGTACAGGAAGATAAGGTGG +
Preference number: 3 (lower is better)
Translates to: GFTQKLGPHQHG*LGPLEYRKIRW
Trigger: CCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTCTGTGTGAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR CCA 72 bp GCCAGGGTTCACACAGAAGCTTGGACCACACCAGCATaGCTGACTTGGGCCTCTGGAGTACAGGAAGATAAG +
Preference number: 3 (lower is better)
Translates to: ARVHTEAWTTPA*LTWASGVQEDK
Trigger: CTTATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTCTGTGTGAACCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR CCA 72 bp AAGAAGGTTGGCCACCGTCTTCCCAGTGGCAGGGTGTaGCATGGAATTCCCAGTCTTGCCAGCTTTCTCTGT +
Preference number: 3 (lower is better)
Translates to: KKVGHRLPSGRV*HGIPSLASFLC
Trigger: ACAGAGAAAGCTGGCAAGACTGGGAATTCCATGCCACACCCTGCCACTGGGAAGACGGTGGCCAACCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
3UTR-3UTR CAA 90 bp TTCCCAGGGGCTGGGGCCGCCTTTCTTGCTGGAGACTCCTTAGTAGAAACTGATCTTTTTCTTTCATGCTaGATGGCAAGTCCGCCCCCA +
Preference number: 3 (lower is better)
Translates to: FPGAGAAFLAGDSLVETDLFLSC*MASPPP
Trigger: TGGGGGCGGACTTGCCATCAAGCATGAAAGAAAAAG...ATCAGTTTCTACTAAGGAGTCTCCAGCAAGAAAGGCGGCCCCAGCCCCTGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000643812.1
3UTR-3UTR CAA 90 bp GAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGAGACCGGTATGCCACAGGTGCTaGAGAGAGGGTCCTGGGCAG +
Preference number: 3 (lower is better)
Translates to: ELITMWYVIFKGRWFMRPVCHRC*REGPGQ
Trigger: CTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATAC...CGGTCTCATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR-3UTR CAA 90 bp GGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATGTATGCCACAGGTGCTaGAGAGAGGGTCCTGGGCAG +
Preference number: 3 (lower is better)
Translates to: GGVQTASDLTDELITMWYVCHRC*REGPGQ
Trigger: CTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATAC...ATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR-3UTR CAA 90 bp GTTGTTCTTTACTTTTGTAATCTGTGCCATTGGAAAGTGAGAGGCAGTGAGCACACCAGCATGGCTGACTaGGGCCTCTGGAGTACAGGA +
Preference number: 3 (lower is better)
Translates to: VVLYFCNLCHWKVRGSEHTSMAD*GLWSTG
Trigger: TCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGT...GTGCTCACTGCCTCTCACTTTCCAATGGCACAGATTACAAAAGTAAAGAACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR-3UTR CAA 90 bp GAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGAGACCGACCAGCATGGCTGACTaGGGCCTCTGGAGTACAGGA +
Preference number: 3 (lower is better)
Translates to: ELITMWYVIFKGRWFMRPTSMAD*GLWSTG
Trigger: TCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGT...CGGTCTCATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR-3UTR CAA 90 bp GCCTTTCTTGCTGGAGACTCCTTAGTAGAAACTGATGAGGCTTTGACCTGGGCTTTCTCTGTCTCTGCCTaGGCTTTTTCTTTCATGCTT +
Preference number: 3 (lower is better)
Translates to: AFLAGDSLVETDEALTWAFSVSA*AFSFML
Trigger: AAGCATGAAAGAAAAAGCCAAGGCAGAGACAGAGAA...AGCCCAGGTCAAAGCCTCATCAGTTTCTACTAAGGAGTCTCCAGCAAGAAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643812.1
3UTR CCA 72 bp TCAAACACTTTAAAAGCAGACTCAGGAAGCTGGGCATaGTGGTATGTGCATGGAATTCCACCTACTCAAGAG +
Preference number: 3 (lower is better)
Translates to: SNTLKADSGSWA*WYVHGIPPTQE
Trigger: CTCTTGAGTAGGTGGAATTCCATGCACATACCACCATGCCCAGCTTCCTGAGTCTGCTTTTAAAGTGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643812.1
3UTR CCA 72 bp ACAGCATCTGACCTTACTGATGAATTGATAACAATGTaGTATGTGATATTCAAGGGGAGGTGGTTCATGAGA +
Preference number: 3 (lower is better)
Translates to: TASDLTDELITM*YVIFKGRWFMR
Trigger: TCTCATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp AGGGCCACGCCTGCACCTTCTACGCTCCGTGGGCTTGCTTCCCCTGGCTCCCCACCTGAAGGCTTCACCTaGGCCAGCGTCTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: RATPAPSTLRGLASPGSPPEGFT*ASVSAS
Trigger: GGAGGCGGAGACGCTGGCTCAGGTGAAGCCTTCAGG...TGGGGAGCCAGGGGAAGCAAGCCCACGGAGCGTAGAAGGTGCAGGCGTGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR CCA 90 bp CTGGAGCTGGAGGTGTCCTCGCTGGAGCTGTCGGCCTGGCCCGCTGACACCATCCTGGAGCTGTCGGCCTaGCCCGCTGACACCATCCCA +
Preference number: 4 (lower is better)
Translates to: LELEVSSLELSAWPADTILELSA*PADTIP
Trigger: TGGGATGGTGTCAGCGGGCCAGGCCGACAGCTCCAG...GATGGTGTCAGCGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR TCA 90 bp GCAGGGCCACGCCTGCACCTTCTACGCTCCGTGGGCTTGCTTCCCCTGGCTCCCGAGCCAAGGCAGCTCTaGTCTGGTGGGTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: AGPRLHLLRSVGLLPLAPEPRQL*SGGSSL
Trigger: CAGGGAAGACCCACCAGATCAGAGCTGCCTTGGCTC...GGGAGCCAGGGGAAGCAAGCCCACGGAGCGTAGAAGGTGCAGGCGTGGCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR GCA 90 bp AGGGCCACGCCTGCACCTTCTACGCTCCGTGGGCTTGCTTCCCCTGGCTCCCCAGGCAGAGGTCACAGCTaGCGGTGCCTCCCCATCACT +
Preference number: 4 (lower is better)
Translates to: RATPAPSTLRGLASPGSPGRGHS*RCLPIT
Trigger: AGTGATGGGGAGGCACCGGCAGCTGTGACCTCTGCC...TGGGGAGCCAGGGGAAGCAAGCCCACGGAGCGTAGAAGGTGCAGGCGTGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR GCA 90 bp AGGAGGCTGAGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGGGCAGCCTGGGTAGGAGCTCCTGGCTGTaGTCTCCGAGGCTCGGGCCT +
Preference number: 4 (lower is better)
Translates to: RRLSLTGFLGEDLQGSLGRSSWL*SPRLGP
Trigger: AGGCCCGAGCCTCGGAGAGCACAGCCAGGAGCTCCT...ACCCAGGCTGCCCTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR CCA 90 bp CTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGGCTCCCGCCGCTTCCTaGCCTCGGCCATACCCGCGA +
Preference number: 4 (lower is better)
Translates to: LGPLEYRKIRWAWSHPWRAPAAS*PRPYPR
Trigger: TCGCGGGTATGGCCGAGGCCAGGAAGCGGCGGGAGC...CCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GTCTGTCTCATCACTGGAGCTGGAGGTGTCCTCGCTGGAGCTGTCGGCCTGGCCCACCTTCCCAGGGGCTaGGGCCGCCTTTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: VCLITGAGGVLAGAVGLAHLPRG*GRLSCW
Trigger: CCAGCAAGAAAGGCGGCCCCAGCCCCTGGGAAGGTG...GGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGACAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR CCA 90 bp AGGAGGCTGAGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGGGCAGCCTGGGTCTGGGCCAGCTGGACTaGGCAGAGGTCACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: RRLSLTGFLGEDLQGSLGLGQLD*AEVTAA
Trigger: GGCAGCTGTGACCTCTGCCCAGTCCAGCTGGCCCAG...ACCCAGGCTGCCCTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR TCA 90 bp CCTGGCAACAGGAGGCTGAGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGGGCCTCCTCACTGCTCCCTaGGTCCTCCTCTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: PGNRRLSLTGFLGEDLQGLLTAP*VLLWPC
Trigger: ACAGGGCCAGAGGAGGACTCAGGGAGCAGTGAGGAG...GCCCTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCTGTTGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR GCA 90 bp CCTGGCAACAGGAGGCTGAGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGGGCTGTCTGGGCCTGAGCTaGTGTAGCCACGGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: PGNRRLSLTGFLGEDLQGCLGLS*CSHGLP
Trigger: GGGAAGGCCGTGGCTACAGCAGCTCAGGCCCAGACA...GCCCTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCTGTTGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR CCA 90 bp CTGGAGGTGTCCTCGCTGGAGCTGTCGGCCTGGCCCGCTGACACCATCCCAGGCTGGCAGGGTGTGGCATaGAATTCCCAGTCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LEVSSLELSAWPADTIPGWQGVA*NSQSCQ
Trigger: CTGGCAAGACTGGGAATTCCATGCCACACCCTGCCA...GCCTGGGATGGTGTCAGCGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR CCA 90 bp GTCTCATCACTGGAGCTGGAGGTGTCCTCGCTGGAGCTGTCGGCCTGGCCCGCTACACCATCCCAGGCTTaGCAGCAGCTCCAAAGGCCG +
Preference number: 4 (lower is better)
Translates to: VSSLELEVSSLELSAWPATPSQA*QQLQRP
Trigger: CGGCCTTTGGAGCTGCTGCCAAGCCTGGGATGGTGT...AGCGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR CCA 90 bp CTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGCCCCACCTTCCCGGGTaGCACTGGGCCGGCGCCTTT +
Preference number: 4 (lower is better)
Translates to: LTWASGVQEDKVGLVPPLPHLPG*HWAGAF
Trigger: AAAGGCGCCGGCCCAGTGCCACCCGGGAAGGTGGGG...CAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGGCTTCTTGGCCCTCTTaGCTGGGGGCAGGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: LGPLEYRKIRWAWSHPWRASWPS*LGAGPL
Trigger: GAGGGGCCCTGCCCCCAGCCAAGAGGGCCAAGAAGC...CCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GGTCCTGGCAACAGGAGGCTGAGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGTGCGGGTGTAGCAGCTaGGCCAGCTGGACTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GPGNRRLSLTGFLGEDLQCGCSS*ASWTGQ
Trigger: CTGCCCAGTCCAGCTGGCCCAGCTGCTACACCCGCA...CTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCTGTTGCCAGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR TCA 90 bp ACCTTCCCAGGGGCTGGGGCCGCCTTTCTTGCTGGAGACTCCTTAGTAGAAACTGTCGGCCTGGCCCGCTaGCACCATCCCAGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: TFPGAGAAFLAGDSLVETVGLAR*HHPRLG
Trigger: GCCAAGCCTGGGATGGTGTCAGCGGGCCAGGCCGAC...AGTTTCTACTAAGGAGTCTCCAGCAAGAAAGGCGGCCCCAGCCCCTGGGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR TCA 90 bp GCTGGCCCCAGCCATGCTGGCTTTGGGGGCTATTCTTGGGTGGGCAGTGGGCATCTGGTGGGTCTTCCCTaGAGGCTTCACCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: AGPSHAGFGGYSWVGSGHLVGLP*RLHLSQ
Trigger: CTGGCTCAGGTGAAGCCTTCAGGGAAGACCCACCAG...ATGCCCACTGCCCACCCAAGAATAGCCCCCAAAGCCAGCATGGCTGGGGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR TCA 90 bp AGGAGGCTGAGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGGGCAGCCTGGGTCTGGCAACAGGAGGCTaGGCCTCACTGGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: RRLSLTGFLGEDLQGSLGLATGG*ASLAFW
Trigger: CCAGAAAGCCAGTGAGGCTCAGCCTCCTGTTGCCAG...ACCCAGGCTGCCCTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR GCA 90 bp GGTCCTGGCAACAGGAGGCTGAGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGTCCGACTGGACTCCTTaGTGCTGCTGGCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GPGNRRLSLTGFLGEDLQSDWTP*CCWPQP
Trigger: TGGCTGGGGCCAGCAGCAGCAAGGAGTCCAGTCGGA...CTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCTGTTGCCAGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR GCA 90 bp CTGGAGGTGTCCTCGCTGGAGCTGTCGGCCTGGCCCGCTGACACCATCCCAGGCTGGGGCCGCCTTTCTTaGTGGAGACTCCTTAGTAGA +
Preference number: 4 (lower is better)
Translates to: LEVSSLELSAWPADTIPGWGRLS*WRLLSR
Trigger: TCTACTAAGGAGTCTCCAGCAAGAAAGGCGGCCCCA...GCCTGGGATGGTGTCAGCGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR CCA 90 bp CTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGTGGAGGTGTCCTCGCTaGAGCTGTCGGCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: LTWASGVQEDKVGLVPPLWRCPR*SCRPGP
Trigger: CGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCA...CAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CTGTCTCATCACTGGAGCTGGAGGTGTCCTCGCTGGAGCTGTCGGCCTGGCCCGCGTCTGTCTCATCACTaGAGCTGGAGGTGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: LSHHWSWRCPRWSCRPGPRLSHH*SWRCPR
Trigger: GCGAGGACACCTCCAGCTCCAGTGATGAGACAGACG...CGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR CCA 90 bp AGGAGGCTGAGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGGGCAGCCTGGGTACTCCTTGCTGCTGCTaGCCCCAGCCATGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: RRLSLTGFLGEDLQGSLGTPCCC*PQPCWL
Trigger: AAGCCAGCATGGCTGGGGCCAGCAGCAGCAAGGAGT...ACCCAGGCTGCCCTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR CCA 90 bp GGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTCACCTTCCCAGGGGCTaGGGCCGCCTTTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GPLEYRKIRWAWSHPWRCHLPRG*GRLSCW
Trigger: CCAGCAAGAAAGGCGGCCCCAGCCCCTGGGAAGGTG...ACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp TGGCAACAGGAGGCTGAGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGGGCAGCAAGCTCACCCCACTTaGAGGCTGGGTCCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: WQQEAEPHWLSGRGPSGQQAHPT*RLGPGN
Trigger: GTTGCCAGGACCCAGCCTTCAAGTGGGGTGAGCTTG...CTGCCCTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCTGTTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR GCA 90 bp GGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTTGTCTGGGCCTGAGCTaGTGTAGCCACGGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GPLEYRKIRWAWSHPWRCCLGLS*CSHGLP
Trigger: GGGAAGGCCGTGGCTACAGCAGCTCAGGCCCAGACA...ACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GGGTGGGCAGTGGGCATGGTCACCACATTGGTTCTGATGCCAGGAGTCAAGCACGTCATCCTGCTTCCCTaGCTGGGCAGCCGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: GWAVGMVTTLVLMPGVKHVILLP*LGSRRP
Trigger: GGGCCTTCGGCTGCCCAGGCAGGGAAGCAGGATGAC...GTGCTTGACTCCTGGCATCAGAACCAATGTGGTGACCATGCCCACTGCCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR GCA 90 bp GGGTGGGCAGTGGGCATGGTCACCACATTGGTTCTGATGCCAGGAGTCAAGCACCTTCCTCGGGGTGCTTaGAGCCTGGGCTTGTGCGGG +
Preference number: 4 (lower is better)
Translates to: GWAVGMVTTLVLMPGVKHLPRGA*SLGLCG
Trigger: CCCGCACAAGCCCAGGCTGCAAGCACCCCGAGGAAG...GTGCTTGACTCCTGGCATCAGAACCAATGTGGTGACCATGCCCACTGCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR GCA 90 bp CTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGCTGGCTTCGTGTCCCTaGAGGGGCCTCCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: LGPLEYRKIRWAWSHPWRLASCP*RGLLLT
Trigger: AGTGAGGAGGAGGCCCCTGCAGGGACACGAAGCCAG...CCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp CTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGGGACAGGGGAGCTGGTaGTCTGAGGTGCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: LGPLEYRKIRWAWSHPWRGQGSW*SEVPGR
Trigger: TCTGCCAGGCACCTCAGAGCACCAGCTCCCCTGTCC...CCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CATGAAGGTATGCCACAGGTGCTTGAGAGAGGGTCCTGGGCAGAGCTCATGGGATGGAGGTGTCCTCGCTaGAGCTGTCGGCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: HEGMPQVLERGSWAELMGWRCPR*SCRPGP
Trigger: CGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCA...TCCCATGAGCTCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATACCTTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CACAGAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGATCCCGCTTCCCCGCCTaGGCCTTGGCAACTGCAGGC +
Preference number: 4 (lower is better)
Translates to: HRSLDHTSMADLGLWSTGSRFPA*ALATAG
Trigger: GCCTGCAGTTGCCAAGGCCCAGGCGGGGAAGCGGGA...TCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTGGCCTTCCCCACAGATaGCACAGATGCTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GPLEYRKIRWAWSHPWRCGLPHR*HRCWAP
Trigger: AGGGGCCCAGCATCTGTGCCATCTGTGGGGAAGGCC...ACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp AGGGCCACGCCTGCACCTTCTACGCTCCGTGGGCTTGCTTCCCCTGGCTCCCCACATCTGATATCCGACTaGACTCCTTGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RATPAPSTLRGLASPGSPHLISD*TPCCCW
Trigger: CCAGCAGCAGCAAGGAGTCCAGTCGGATATCAGATG...TGGGGAGCCAGGGGAAGCAAGCCCACGGAGCGTAGAAGGTGCAGGCGTGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR CCA 90 bp AGGAGGCTGAGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGGGCAGCCTGGGTTTGAAGGCTGGGTCCTaGCAACAGGAGGCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: RRLSLTGFLGEDLQGSLGLKAGS*QQEAEP
Trigger: AGGCTCAGCCTCCTGTTGCCAGGACCCAGCCTTCAA...ACCCAGGCTGCCCTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR CCA 90 bp GGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTGCCCCTCCTTTGACCTaGGGTGTCACATCCCCCACC +
Preference number: 4 (lower is better)
Translates to: GPLEYRKIRWAWSHPWRCAPPLT*GVTSPT
Trigger: GGTGGGGGATGTGACACCCCAGGTCAAAGGAGGGGC...ACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGCTCCGTGTTCCTCTCTaGGGGTGCTGGGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRLRVPL*GCWGQG
Trigger: ACCCTGGCCCCAGCACCCCCAGAGAGGAACACGGAG...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513538.2
CDS-3UTR TCA 90 bp AGGGTAATGCTGTCTGATGGAAGGGCCAGGGTTCACACAGAAGCTTGGACCACAGTCGGCCTGGCCCGCTaGCACCATCCCAGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: RVMLSDGRARVHTEAWTTVGLAR*HHPRLG
Trigger: GCCAAGCCTGGGATGGTGTCAGCGGGCCAGGCCGAC...TGTGGTCCAAGCTTCTGTGTGAACCCTGGCCCTTCCATCAGACAGCATTACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp ACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCCTGAAGGCTTCGCCTaGGCAGGCGCCTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: TTPAWLTWASGVQEDKVGPEGFA*AGASSS
Trigger: TGAGGAGGAGGCGCCTGCTCAGGCGAAGCCTTCAGG...GCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp CTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGCTCCTCACTGCTCCCTaGGTCCTCCTCTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LTWASGVQEDKVGLVPPLLLTAP*VLLWPC
Trigger: ACAGGGCCAGAGGAGGACTCAGGGAGCAGTGAGGAG...CAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp CACAGAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAGCAGGGCCCCTCCTTTaGCCTGGGGTGTCACATCCC +
Preference number: 4 (lower is better)
Translates to: HRSLDHTSMADLGLWSTGAGPLL*PGVSHP
Trigger: GGGATGTGACACCCCAGGTCAAAGGAGGGGCCCTGC...TCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp CTGGAGCTGGAGGTGTCCTCGCTGGAGCTGTCGGCCTGGCCCGCTGACACCATCCTCCTCACTACTCTCTaGCTCCTCTTCTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LELEVSSLELSAWPADTILLTTL*LLFWLL
Trigger: AAGAAGCCAGAAGAGGAGTCAGAGAGTAGTGAGGAG...GATGGTGTCAGCGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR GCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGCTGGACCTGGGCGGCTaGAGGCCCTGTTTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRLDLGG*RPCFPR
Trigger: CCTAGGAAAACAGGGCCTGCAGCCGCCCAGGTCCAG...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp ACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCGACGGCTACAGGCCCTaGCTTCTGAGGGGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: TTPAWLTWASGVQEDKVGDGYRP*LLRGPL
Trigger: AAGGGGCCCCCTCAGAAGGCAGGGCCTGTAGCCGTC...GCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp ACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCGTCATCCTGCTTCCCTaGCTGGGCAGCCGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: TTPAWLTWASGVQEDKVGVILLP*LGSRRP
Trigger: GGGCCTTCGGCTGCCCAGGCAGGGAAGCAGGATGAC...GCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGGGCAGAGGTCACAGCTaGCGGTGCCTCCCCATCACT +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRGRGHS*RCLPIT
Trigger: AGTGATGGGGAGGCACCGGCAGCTGTGACCTCTGCC...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GGGTGGGCAGTGGGCATGGTCACCACATTGGTTCTGATGCCAGGAGTCAAGCACGACTGGACTCCTTGCTaGTGCTGGCCCCAGCCATGC +
Preference number: 4 (lower is better)
Translates to: GWAVGMVTTLVLMPGVKHDWTPC*CWPQPC
Trigger: GCATGGCTGGGGCCAGCAGCAGCAAGGAGTCCAGTC...GTGCTTGACTCCTGGCATCAGAACCAATGTGGTGACCATGCCCACTGCCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR GCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGGGACAGGGGAGCTGGTaGTCTGAGGTGCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRGQGSW*SEVPGR
Trigger: TCTGCCAGGCACCTCAGAGCACCAGCTCCCCTGTCC...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp ACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGAGCTGTCGGCCTaGCCCGCTGACACCATCCCA +
Preference number: 4 (lower is better)
Translates to: TTPAWLTWASGVQEDKVGLELSA*PADTIP
Trigger: TGGGATGGTGTCAGCGGGCCAGGCCGACAGCTCCAG...GCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GACTGTGGCTTAAGCTCTGGGTGCAGTGGAGCACATGAAGGTATGCCACAGGTGTCCCGCTTCCCCGCCTaGGCCTTGGCAACTGCAGGC +
Preference number: 4 (lower is better)
Translates to: DCGLSSGCSGAHEGMPQVSRFPA*ALATAG
Trigger: GCCTGCAGTTGCCAAGGCCCAGGCGGGGAAGCGGGA...CACCTGTGGCATACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCCACAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GACTGTGGCTTAAGCTCTGGGTGCAGTGGAGCACATGAAGGTATGCCACAGGTGCTTCCCGGGTGGCACTaGGCCGGCGCCTTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: DCGLSSGCSGAHEGMPQVLPGWH*AGAFPQ
Trigger: TTGGGGAAAGGCGCCGGCCCAGTGCCACCCGGGAAG...CACCTGTGGCATACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCCACAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CACAGAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGATCCCACTTCCCCACCTaGGCTGAGGGGGTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: HRSLDHTSMADLGLWSTGSHFPT*AEGVAG
Trigger: GCCTGCAACCCCCTCAGCCCAGGTGGGGAAGTGGGA...TCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGGCCCCTTGGCAGGACTaGAGGTGGGTTTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRAPWQD*RWVWPG
Trigger: TCCAGGCCAAACCCACCTCCAGTCCTGCCAAGGGGC...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp TGGCAACAGGAGGCTGAGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGGGCAGTGGCCCCAGCCATGCTaGCTTTGGGGGCTATTCTTG +
Preference number: 4 (lower is better)
Translates to: WQQEAEPHWLSGRGPSGQWPQPC*LWGLFL
Trigger: CAAGAATAGCCCCCAAAGCCAGCATGGCTGGGGCCA...CTGCCCTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCTGTTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR CCA 90 bp GCCACTGAGGCCGAGGGAGGCAAACCAAGTGCAGAGGTCATGGGGCAGATGAGTACCCCACTTGAAGGCTaGGTCCTGGCAACAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ATEAEGGKPSAEVMGQMSTPLEG*VLATGG
Trigger: GCCTCCTGTTGCCAGGACCCAGCCTTCAAGTGGGGT...ACTCATCTGCCCCATGACCTCTGCACTTGGTTTGCCTCCCTCGGCCTCAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR CCA 90 bp CATGAAGGTATGCCACAGGTGCTTGAGAGAGGGTCCTGGGCAGAGCTCATGGGACTGGGACAGGGGAGCTaGTGCTCTGAGGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: HEGMPQVLERGSWAELMGLGQGS*CSEVPG
Trigger: GCCAGGCACCTCAGAGCACCAGCTCCCCTGTCCCAG...TCCCATGAGCTCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATACCTTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTTCTGTGGTTAGGCCCTaGGACAGGGGAGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: GPLEYRKIRWAWSHPWRCSVVRP*DRGAGA
Trigger: AGCACCAGCTCCCCTGTCCCAGGGCCTAACCACAGA...ACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GGGTGGGCAGTGGGCATGGTCACCACATTGGTTCTGATGCCAGGAGTCAAGCACAGCAGCTGGGCCAGCTaGACTGGGCAGAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: GWAVGMVTTLVLMPGVKHSSWAS*TGQRSQ
Trigger: CTGTGACCTCTGCCCAGTCCAGCTGGCCCAGCTGCT...GTGCTTGACTCCTGGCATCAGAACCAATGTGGTGACCATGCCCACTGCCCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR TCA 90 bp CTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGCAGCTCCGACCTaGGAGGTTTTTCCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: LTWASGVQEDKVGLVPPLEAAPT*EVFPEA
Trigger: GGCCTCAGGAAAAACCTCTCAGGTCGGAGCTGCCTC...CAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GACTGTGGCTTAAGCTCTGGGTGCAGTGGAGCACATGAAGGTATGCCACAGGTGCCTGAAGGCTTCACCTaGGCCAGCGTCTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: DCGLSSGCSGAHEGMPQVPEGFT*ASVSAS
Trigger: GGAGGCGGAGACGCTGGCTCAGGTGAAGCCTTCAGG...CACCTGTGGCATACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCCACAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATCCTGAAGGCTTCACCTaGGCCAGCGTCTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: EAWTTPAWLTWASGVQEDPEGFT*ASVSAS
Trigger: GGAGGCGGAGACGCTGGCTCAGGTGAAGCCTTCAGG...ATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GGTCCTGGCAACAGGAGGCTGAGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGAGCTGGGTTCTTCTTTaGCACCTGAGTGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: GPGNRRLSLTGFLGEDLQSWVLL*HLSGWS
Trigger: GGACCAGCCACTCAGGTGTCAAAGAAGAACCCAGCT...CTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCTGTTGCCAGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR TCA 90 bp TTCCCAGGGGCTGGGGCCGCCTTTCTTGCTGGAGACTCCTTAGTAGAAACTGATGCAGGGCCCCTCCTTTaGCCTGGGGTGTCACATCCC +
Preference number: 4 (lower is better)
Translates to: FPGAGAAFLAGDSLVETDAGPLL*PGVSHP
Trigger: GGGATGTGACACCCCAGGTCAAAGGAGGGGCCCTGC...ATCAGTTTCTACTAAGGAGTCTCCAGCAAGAAAGGCGGCCCCAGCCCCTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR GCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGCAAAGGCCGGGACGCTaGCCTCCTCCTCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRQRPGR*PPPQFL
Trigger: CAGAAACTGAGGAGGAGGGCAGCGTCCCGGCCTTTG...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGCTCCTCTGGCTTCCCTaGCTTGGTCTGGGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRLLWLP*LGLGGY
Trigger: GTAGCCTCCCAGACCAAGGCAGGGAAGCCAGAGGAG...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp ACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGACCTGGGCGGCTaGAGGCCCTGTTTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: TTPAWLTWASGVQEDKVGLDLGG*RPCFPR
Trigger: CCTAGGAAAACAGGGCCTGCAGCCGCCCAGGTCCAG...GCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GACTGTGGCTTAAGCTCTGGGTGCAGTGGAGCACATGAAGGTATGCCACAGGTGGACGGCTACAGGCCCTaGCTTCTGAGGGGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: DCGLSSGCSGAHEGMPQVDGYRP*LLRGPL
Trigger: AAGGGGCCCCCTCAGAAGGCAGGGCCTGTAGCCGTC...CACCTGTGGCATACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCCACAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGCACAGATGGCACAGATaGTGGGCCCCTCGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRHRWHR*WAPRQD
Trigger: GTCTTGGCGAGGGGCCCAGCATCTGTGCCATCTGTG...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp CACAGAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAGGCAGAGGTCACAGCTaGCGGTGCCTCCCCATCACT +
Preference number: 4 (lower is better)
Translates to: HRSLDHTSMADLGLWSTGGRGHS*RCLPIT
Trigger: AGTGATGGGGAGGCACCGGCAGCTGTGACCTCTGCC...TCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp CACCACATTGGTTCTGATGCCAGGAGTCAAGCACTGTGTAGCGGGGATCACGTCGGGCCTTCCTCGGGGTaGTTGCAGCCTGGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: HHIGSDARSQALCSGDHVGPSSG*LQPGLV
Trigger: CACAAGCCCAGGCTGCAAGCACCCCGAGGAAGGCCC...GACGTGATCCCCGCTACACAGTGCTTGACTCCTGGCATCAGAACCAATGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR GCA 90 bp CTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGCTGGTGCTCTGAGGTaGCTGGCAGAAGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LTWASGVQEDKVGLVPPLAGALR*LAEASG
Trigger: CCCAGAAGCTTCTGCCAGGCACCTCAGAGCACCAGC...CAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GGTCCTGGCAACAGGAGGCTGAGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGGGGAGGCAAACCAAGTaGAGAGGTCATGGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: GPGNRRLSLTGFLGEDLQGRQTK*RGHGAD
Trigger: ATCTGCCCCATGACCTCTGCACTTGGTTTGCCTCCC...CTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCTGTTGCCAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR GCA 90 bp CATGAAGGTATGCCACAGGTGCTTGAGAGAGGGTCCTGGGCAGAGCTCATGGGAGCAGCTCTTCCTCACTaGTCTCCGAGGACCCCTCCG +
Preference number: 4 (lower is better)
Translates to: HEGMPQVLERGSWAELMGAALPH*SPRTPP
Trigger: CGGAGGGGTCCTCGGAGAGCAGTGAGGAAGAGCTGC...TCCCATGAGCTCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATACCTTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513538.2
CDS-3UTR CCA 90 bp AGAAGCTTCTGGGAGCTTGGGGCTAGAGGAGGACAAAGGGTAATGCTGTCTGATGCTCCCGCCGCTTCCTaGCCTCGGCCATACCCGCGA +
Preference number: 4 (lower is better)
Translates to: RSFWELGARGGQRVMLSDAPAAS*PRPYPR
Trigger: TCGCGGGTATGGCCGAGGCCAGGAAGCGGCGGGAGC...ATCAGACAGCATTACCCTTTGTCCTCCTCTAGCCCCAAGCTCCCAGAAGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGACACCATCCCAGGCTTaGCAGCAGCTCCAAAGGCCG +
Preference number: 4 (lower is better)
Translates to: LTWASGVQEDKVGLVPPLTPSQA*QQLQRP
Trigger: CGGCCTTTGGAGCTGCTGCCAAGCCTGGGATGGTGT...CAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp ACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCCTGAAGCAGGGCCTTaGCAGCTGGCGTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TTPAWLTWASGVQEDKVGPEAGP*QLASPP
Trigger: AGGAGGAGACGCCAGCTGCCAAGGCCCTGCTTCAGG...GCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp AGGGTAATGCTGTCTGATGGAAGGGCCAGGGTTCACACAGAAGCTTGGACCACATCCTGCTTCCCCACCTaGACCTGGGCGGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: RVMLSDGRARVHTEAWTTSCFPT*TWAAAG
Trigger: GCCTGCAGCCGCCCAGGTCCAGGTGGGGAAGCAGGA...TGTGGTCCAAGCTTCTGTGTGAACCCTGGCCCTTCCATCAGACAGCATTACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GACTGTGGCTTAAGCTCTGGGTGCAGTGGAGCACATGAAGGTATGCCACAGGTGCCGGGGCCACAGCTGTaGGCACCTCTCCATCACTGC +
Preference number: 4 (lower is better)
Translates to: DCGLSSGCSGAHEGMPQVPGPQL*APLHHC
Trigger: GCAGTGATGGAGAGGTGCCCACAGCTGTGGCCCCGG...CACCTGTGGCATACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCCACAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGGACTGGAGGTGGGTTTaGCCTGGAGGATGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LGPLEYRKIRWAWSHPWRDWRWV*PGGCSP
Trigger: TGGGGAACATCCTCCAGGCCAAACCCACCTCCAGTC...CCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTTTTCAGCCTTGACCTaGACGGCTACAGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LGPLEYRKIRWAWSHPWRFSALT*TATGPA
Trigger: GGCAGGGCCTGTAGCCGTCCAGGTCAAGGCTGAAAA...CCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGGCACAGGGGCGACCTTaGCAGATGCAGTGGTATTGG +
Preference number: 4 (lower is better)
Translates to: LGPLEYRKIRWAWSHPWRAQGRP*QMQWYW
Trigger: CCAATACCACTGCATCTGCCAAGGTCGCCCCTGTGC...CCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTTGCTGAAGGTGCTCTaGCGGCAGCTGGGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LGPLEYRKIRWAWSHPWRLLKVL*RQLGWL
Trigger: AAGCCAACCCAGCTGCCGCCAGAGCACCTTCAGCAA...CCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GACTGTGGCTTAAGCTCTGGGTGCAGTGGAGCACATGAAGGTATGCCACAGGTGTCCTGCTTCCCTGCCTaGGCAGCCGAAGGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: DCGLSSGCSGAHEGMPQVSCFPA*AAEGPV
Trigger: GACAGGGCCTTCGGCTGCCCAGGCAGGGAAGCAGGA...CACCTGTGGCATACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCCACAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GGGTGGGCAGTGGGCATGGTCACCACATTGGTTCTGATGCCAGGAGTCAAGCACGGGGCTATTCTTGGGTaGGCAGTGGGCATGGTCACC +
Preference number: 4 (lower is better)
Translates to: GWAVGMVTTLVLMPGVKHGAILG*AVGMVT
Trigger: GGTGACCATGCCCACTGCCCACCCAAGAATAGCCCC...GTGCTTGACTCCTGGCATCAGAACCAATGTGGTGACCATGCCCACTGCCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR CCA 90 bp TGGCAACAGGAGGCTGAGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGGGCAGTTTGGGGGCTATTCTTaGGTGGGCAGTGGGCATGGT +
Preference number: 4 (lower is better)
Translates to: WQQEAEPHWLSGRGPSGQFGGYS*VGSGHG
Trigger: ACCATGCCCACTGCCCACCCAAGAATAGCCCCCAAA...CTGCCCTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCTGTTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR CCA 90 bp GCCACTGAGGCCGAGGGAGGCAAACCAAGTGCAGAGGTCATGGGGCAGATGAGTCAGCCATGCTGGCTTTaGGGGCTATTCTTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: ATEAEGGKPSAEVMGQMSQPCWL*GLFLGG
Trigger: CCCACCCAAGAATAGCCCCCAAAGCCAGCATGGCTG...ACTCATCTGCCCCATGACCTCTGCACTTGGTTTGCCTCCCTCGGCCTCAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR CCA 90 bp GTCTCATCACTGGAGCTGGAGGTGTCCTCGCTGGAGCTGTCGGCCTGGCCCGCTGATGAGGCTTTGACCTaGGCTGGTTTTACTGAGGGT +
Preference number: 4 (lower is better)
Translates to: VSSLELEVSSLELSAWPADEALT*AGFTEG
Trigger: ACCCTCAGTAAAACCAGCCCAGGTCAAAGCCTCATC...AGCGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR CCA 90 bp TTCCCAGGGGCTGGGGCCGCCTTTCTTGCTGGAGACTCCTTAGTAGAAACTGATCTTGGCCCTCTTGGCTaGGGGCAGGGCCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: FPGAGAAFLAGDSLVETDLGPLG*GQGPSF
Trigger: AAAGGAGGGGCCCTGCCCCCAGCCAAGAGGGCCAAG...ATCAGTTTCTACTAAGGAGTCTCCAGCAAGAAAGGCGGCCCCAGCCCCTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR CCA 90 bp ACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCGCCTGGTCCCACCCTTaGAGGTGTAGCCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: TTPAWLTWASGVQEDKVGAWSHP*RCSLSR
Trigger: CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGC...GCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CATGAAGGTATGCCACAGGTGCTTGAGAGAGGGTCCTGGGCAGAGCTCATGGGAGCCTGGTCCCACCCTTaGAGGTGTAGCCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: HEGMPQVLERGSWAELMGAWSHP*RCSLSR
Trigger: CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGC...TCCCATGAGCTCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATACCTTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGTCTGTGGTTAGGCCCTaGGACAGGGGAGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LTWASGVQEDKVGLVPPLSVVRP*DRGAGA
Trigger: AGCACCAGCTCCCCTGTCCCAGGGCCTAACCACAGA...CAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp CTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGAGAAGGGTTACGGGCTaGGCCAGGAAACACTTCTGG +
Preference number: 4 (lower is better)
Translates to: LGPLEYRKIRWAWSHPWRRRVTG*ARKHFW
Trigger: CCAGAAGTGTTTCCTGGCTCAGCCCGTAACCCTTCT...CCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp CATGAAGGTATGCCACAGGTGCTTGAGAGAGGGTCCTGGGCAGAGCTCATGGGACCCAAGGGCTTCACCTaGGCTGCATTCATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: HEGMPQVLERGSWAELMGPKGFT*AAFMAA
Trigger: GGCAGCCATGAATGCAGCTCAGGTGAAGCCCTTGGG...TCCCATGAGCTCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATACCTTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGAGCTGGTTTTGCCTaGGCTGCAGTCATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GPLEYRKIRWAWSHPWRCRAGFA*AAVMAA
Trigger: AGCAGCCATGACTGCAGCTCAGGCAAAACCAGCTCT...ACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTCTTGAGCAGCTGCAGTaGCAACTTTTCCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GPLEYRKIRWAWSHPWRCLEQLQ*QLFQGL
Trigger: CAGCCCCTGGAAAAGTTGTCACTGCAGCTGCTCAAG...ACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp CATGAAGGTATGCCACAGGTGCTTGAGAGAGGGTCCTGGGCAGAGCTCATGGGAGAGCCAAGGCAGCTCTaGTCTGGTGGGTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: HEGMPQVLERGSWAELMGEPRQL*SGGSSL
Trigger: CAGGGAAGACCCACCAGATCAGAGCTGCCTTGGCTC...TCCCATGAGCTCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATACCTTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTCTTGGAGGTGTAGCCTaGGCAGGACTGTGGCTTAAG +
Preference number: 4 (lower is better)
Translates to: GPLEYRKIRWAWSHPWRCLGGVA*AGLWLK
Trigger: CTTAAGCCACAGTCCTGCTCAGGCTACACCTCCAAG...ACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp ACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCCACACCAGCATGGCTaGCTTGGGCCTCTGGAGTAC +
Preference number: 4 (lower is better)
Translates to: TTPAWLTWASGVQEDKVGPHQHG*LGPLEY
Trigger: GTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGG...GCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp TCCGCCCCCAGGACTGAGGAGTTGGTAGATGCTAGTCTTGGGGCTAGTATGATCCACTTCTGGCCGCTCTaGTCCTTCACTTCCCGCGCC +
Preference number: 4 (lower is better)
Translates to: SAPRTEELVDASLGASMIHFWPL*SFTSRA
Trigger: GGCGCGGGAAGTGAAGGAGCAGAGCGGCCAGAAGTG...GATCATACTAGCCCCAAGACTAGCATCTACCAACTCCTCAGTCCTGGGGGCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR GCA 90 bp CTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGTGCCGCATCTTCCTCTaGCTTCCGCTTCCGACCAAG +
Preference number: 4 (lower is better)
Translates to: LTWASGVQEDKVGLVPPLCRIFL*LPLPTK
Trigger: CTTGGTCGGAAGCGGAAGGCAGAGGAAGATGCGGCA...CAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp ACCTTCCCAGGGGCTGGGGCCGCCTTTCTTGCTGGAGACTCCTTAGTAGAAACTCAAAGGCCGGGACGCTaGCCTCCTCCTCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: TFPGAGAAFLAGDSLVETQRPGR*PPPQFL
Trigger: CAGAAACTGAGGAGGAGGGCAGCGTCCCGGCCTTTG...AGTTTCTACTAAGGAGTCTCCAGCAAGAAAGGCGGCCCCAGCCCCTGGGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR GCA 90 bp CACAGAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGACTCCTCTGGCTTCCCTaGCTTGGTCTGGGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: HRSLDHTSMADLGLWSTGLLWLP*LGLGGY
Trigger: GTAGCCTCCCAGACCAAGGCAGGGAAGCCAGAGGAG...TCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGCCGATGACTCCTCGCTaGTCTCCGAGTTGTCCATGG +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRPMTPR*SPSCPW
Trigger: CCATGGACAACTCGGAGAGCAGCGAGGAGTCATCGG...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp CTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGACTGGAGCAGTCCCTTaGCCCAAGGACCCCTTGACA +
Preference number: 4 (lower is better)
Translates to: LTWASGVQEDKVGLVPPLTGAVP*PKDPLT
Trigger: TGTCAAGGGGTCCTTGGGGCAAGGGACTGCTCCAGT...CAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp CACAGAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAGCTGGTGCTCTGAGGTaGCTGGCAGAAGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: HRSLDHTSMADLGLWSTGAGALR*LAEASG
Trigger: CCCAGAAGCTTCTGCCAGGCACCTCAGAGCACCAGC...TCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTTGGCAGGGTGTGGCATaGAATTCCCAGTCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: GPLEYRKIRWAWSHPWRCWQGVA*NSQSCQ
Trigger: CTGGCAAGACTGGGAATTCCATGCCACACCCTGCCA...ACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGTCTCATCACTGGAGCTaGAGGTGTCCTCGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRSHHWS*RCPRWS
Trigger: GCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGA...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATCAGGGCCTTGGCAGCTaGCGTCTCCTCCTCACTGTC +
Preference number: 4 (lower is better)
Translates to: EAWTTPAWLTWASGVQEDQGLGS*RLLLTV
Trigger: GACAGTGAGGAGGAGACGCCAGCTGCCAAGGCCCTG...ATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGGGTTTGGCCTaGAGGATGTTCCCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: LTWASGVQEDKVGLVPPLEVGLA*RMFPKD
Trigger: GTCCTTGGGGAACATCCTCCAGGCCAAACCCACCTC...CAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATGCCCCTTGGCAGGACTaGAGGTGGGTTTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: EAWTTPAWLTWASGVQEDAPWQD*RWVWPG
Trigger: TCCAGGCCAAACCCACCTCCAGTCCTGCCAAGGGGC...ATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGGCACAGGGGCGACCTTaGCAGATGCAGTGGTATTGG +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRAQGRP*QMQWYW
Trigger: CCAATACCACTGCATCTGCCAAGGTCGCCCCTGTGC...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CATGAAGGTATGCCACAGGTGCTTGAGAGAGGGTCCTGGGCAGAGCTCATGGGAAGATGGCACAGATGCTaGGCCCCTCGCCAAGACGGT +
Preference number: 4 (lower is better)
Translates to: HEGMPQVLERGSWAELMGRWHRC*APRQDG
Trigger: ACCGTCTTGGCGAGGGGCCCAGCATCTGTGCCATCT...TCCCATGAGCTCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATACCTTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp AGTGGGCATGGTCACCACATTGGTTCTGATGCCAGGAGTCAAGCACTGTGTAGCTCCTGCTTCCCTGCCTaGGCAGCCGAAGGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: SGHGHHIGSDARSQALCSSCFPA*AAEGPV
Trigger: GACAGGGCCTTCGGCTGCCCAGGCAGGGAAGCAGGA...GCTACACAGTGCTTGACTCCTGGCATCAGAACCAATGTGGTGACCATGCCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR CCA 90 bp CACCACATTGGTTCTGATGCCAGGAGTCAAGCACTGTGTAGCGGGGATCACGTCGGGGTGCTTGCAGCCTaGGCTTGTGCGGGTGTAGCA +
Preference number: 4 (lower is better)
Translates to: HHIGSDARSQALCSGDHVGVLAA*ACAGVA
Trigger: TGCTACACCCGCACAAGCCCAGGCTGCAAGCACCCC...GACGTGATCCCCGCTACACAGTGCTTGACTCCTGGCATCAGAACCAATGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR CCA 90 bp TTCCCAGGGGCTGGGGCCGCCTTTCTTGCTGGAGACTCCTTAGTAGAAACTGATGCCCCTCCTTTGACCTaGGGTGTCACATCCCCCACC +
Preference number: 4 (lower is better)
Translates to: FPGAGAAFLAGDSLVETDAPPLT*GVTSPT
Trigger: GGTGGGGGATGTGACACCCCAGGTCAAAGGAGGGGC...ATCAGTTTCTACTAAGGAGTCTCCAGCAAGAAAGGCGGCCCCAGCCCCTGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR CCA 90 bp TCTGAGACCAACGTAGTATTTGCTGAGGGCTCTGCTGACTTCCTGGGAGACTTCGCTTCTTGGCCCTCTTaGCTGGGGGCAGGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SETNVVFAEGSADFLGDFASWPS*LGAGPL
Trigger: GAGGGGCCCTGCCCCCAGCCAAGAGGGCCAAGAAGC...GAAGTCTCCCAGGAAGTCAGCAGAGCCCTCAGCAAATACTACGTTGGTCTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR CCA 90 bp GGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTCTTGAGAGAGGGTCCTaGGCAGAGCTCATGGGATTC +
Preference number: 4 (lower is better)
Translates to: GPLEYRKIRWAWSHPWRCLERGS*AELMGF
Trigger: GAATCCCATGAGCTCTGCCCAGGACCCTCTCTCAAG...ACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTTACAGGAAGATAAGGTaGGCCTGGTCCCACCCTTGG +
Preference number: 4 (lower is better)
Translates to: GPLEYRKIRWAWSHPWRCYRKIR*AWSHPW
Trigger: CCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA...ACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGTGGACCACACCAGCATaGCTGACTTGGGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRWTTPA*LTWASG
Trigger: TCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCA...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATCCTCTCTGGGGGTGCTaGGGCCAGGGTCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: EAWTTPAWLTWASGVQEDPLWGC*GQGLAS
Trigger: AGAAGCAAGACCCTGGCCCCAGCACCCCCAGAGAGG...ATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513538.2
CDS-3UTR CCA 90 bp CTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTTGGAGTTACTGTCCTaGGCAGAGGTCACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: LGPLEYRKIRWAWSHPWRLELLS*AEVTAA
Trigger: GGCAGCTGTGACCTCTGCCCAGGACAGTAACTCCAA...CCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513538.2
CDS-3UTR TCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGGGTGCTGATGGGGTCTaGCACACGGGTTTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRGADGV*HTGFLS
Trigger: GCTAAGAAAACCCGTGTGTCAGACCCCATCAGCACC...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGCTGAGAGGTTTTTCCTaGGGCCTTCGCCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRLRGFS*GLRLKQ
Trigger: CTGCTTCAGGCGAAGGCCTCAGGAAAAACCTCTCAG...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATGAGGCAGCTCCGACCTaGGAGGTTTTTCCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: EAWTTPAWLTWASGVQEDEAAPT*EVFPEA
Trigger: GGCCTCAGGAAAAACCTCTCAGGTCGGAGCTGCCTC...ATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GACTGTGGCTTAAGCTCTGGGTGCAGTGGAGCACATGAAGGTATGCCACAGGTGTGGGCTTTTCAGCCTTaGCCTGGACGGCTACAGGCC +
Preference number: 4 (lower is better)
Translates to: DCGLSSGCSGAHEGMPQVWAFQP*PGRLQA
Trigger: GGCCTGTAGCCGTCCAGGTCAAGGCTGAAAAGCCCA...CACCTGTGGCATACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCCACAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGGGGCAGGCCTTGGTCTaGGGAATTTTCAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRGQALV*GIFRAG
Trigger: ACCAGCTCTGAAAATTCCTCAGACCAAGGCCTGCCC...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GGTCCTGGCAACAGGAGGCTGAGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGTCACCACATTGGTTCTaGTGCCAGGAGTCAAGCACT +
Preference number: 4 (lower is better)
Translates to: GPGNRRLSLTGFLGEDLQSPHWF*CQESST
Trigger: AGTGCTTGACTCCTGGCATCAGAACCAATGTGGTGA...CTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCTGTTGCCAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR TCA 90 bp GCCACTGAGGCCGAGGGAGGCAAACCAAGTGCAGAGGTCATGGGGCAGATGAGTTTCTTCTTTGACACCTaGGTGGCTGGTCCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: ATEAEGGKPSAEVMGQMSFFFDT*VAGPSC
Trigger: ACAGGAGGGACCAGCCACTCAGGTGTCAAAGAAGAA...ACTCATCTGCCCCATGACCTCTGCACTTGGTTTGCCTCCCTCGGCCTCAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR GCA 90 bp GACTGTGGCTTAAGCTCTGGGTGCAGTGGAGCACATGAAGGTATGCCACAGGTGCACAGATGGCACAGATaGTGGGCCCCTCGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: DCGLSSGCSGAHEGMPQVHRWHR*WAPRQD
Trigger: GTCTTGGCGAGGGGCCCAGCATCTGTGCCATCTGTG...CACCTGTGGCATACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCCACAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GCCTTTCTTGCTGGAGACTCCTTAGTAGAAACTGATGAGGCTTTGACCTGGGCTTGGAGGTGTCCTCGCTaGAGCTGTCGGCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: AFLAGDSLVETDEALTWAWRCPR*SCRPGP
Trigger: CGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCA...AGCCCAGGTCAAAGCCTCATCAGTTTCTACTAAGGAGTCTCCAGCAAGAAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR CCA 90 bp CACAGAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGACGTCTGTCTCATCACTaGAGCTGGAGGTGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: HRSLDHTSMADLGLWSTGRLSHH*SWRCPR
Trigger: GCGAGGACACCTCCAGCTCCAGTGATGAGACAGACG...TCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp AGAAGCTTCTGGGAGCTTGGGGCTAGAGGAGGACAAAGGGTAATGCTGTCTGATTCCCACTTCCCCACCTaGGCTGAGGGGGTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: RSFWELGARGGQRVMLSDSHFPT*AEGVAG
Trigger: GCCTGCAACCCCCTCAGCCCAGGTGGGGAAGTGGGA...ATCAGACAGCATTACCCTTTGTCCTCCTCTAGCCCCAAGCTCCCAGAAGCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CACAGAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAGAGGTGGGTTTGGCCTaGAGGATGTTCCCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: HRSLDHTSMADLGLWSTGEVGLA*RMFPKD
Trigger: GTCCTTGGGGAACATCCTCCAGGCCAAACCCACCTC...TCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CACAGAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGACTTCCCAGGGAGTACTaGAGCAGTCCCTTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: HRSLDHTSMADLGLWSTGLPREY*SSPLPQ
Trigger: TTGGGGCAAGGGACTGCTCCAGTACTCCCTGGGAAG...TCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTGGGGTTTCTCACTGGTaGCTTCACCTTGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: GPLEYRKIRWAWSHPWRCGVSHW*LHLGWR
Trigger: TCTCCATCCAAGGTGAAGCCACCAGTGAGAAACCCC...ACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CATGAAGGTATGCCACAGGTGCTTGAGAGAGGGTCCTGGGCAGAGCTCATGGGATCAGAGGCCTTTACCTaGCTTCGTGTCCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: HEGMPQVLERGSWAELMGSEAFT*LRVPAG
Trigger: CCCTGCAGGGACACGAAGCCAGGTAAAGGCCTCTGA...TCCCATGAGCTCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATACCTTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGCTTGAGAGAGGGTCCTaGGCAGAGCTCATGGGATTC +
Preference number: 4 (lower is better)
Translates to: LTWASGVQEDKVGLVPPLLERGS*AELMGF
Trigger: GAATCCCATGAGCTCTGCCCAGGACCCTCTCTCAAG...CAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CATGAAGGTATGCCACAGGTGCTTGAGAGAGGGTCCTGGGCAGAGCTCATGGGATGGACCACACCAGCATaGCTGACTTGGGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: HEGMPQVLERGSWAELMGWTTPA*LTWASG
Trigger: TCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCA...TCCCATGAGCTCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATACCTTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp CATGAAGGTATGCCACAGGTGCTTGAGAGAGGGTCCTGGGCAGAGCTCATGGGAGGTGCTGATGGGGTCTaGCACACGGGTTTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: HEGMPQVLERGSWAELMGGADGV*HTGFLS
Trigger: GCTAAGAAAACCCGTGTGTCAGACCCCATCAGCACC...TCCCATGAGCTCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATACCTTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp ACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTCTCTGTCACTGTCTaGCTCCTCGCTGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: TTPAWLTWASGVQEDKVGLSVTV*LLAAAS
Trigger: AGAAGCAGCAGCGAGGAGTCAGACAGTGACAGAGAG...GCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp CATGAAGGTATGCCACAGGTGCTTGAGAGAGGGTCCTGGGCAGAGCTCATGGGAAGAGCTGGTTTTGCCTaGGCTGCAGTCATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: HEGMPQVLERGSWAELMGRAGFA*AAVMAA
Trigger: AGCAGCCATGACTGCAGCTCAGGCAAAACCAGCTCT...TCCCATGAGCTCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATACCTTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp AGAAGCTTCTGGGAGCTTGGGGCTAGAGGAGGACAAAGGGTAATGCTGTCTGATAGCCACAGCTGGGGATaGGCCTGCTGGAGAAGTCGC +
Preference number: 4 (lower is better)
Translates to: RSFWELGARGGQRVMLSDSHSWG*ACWRSR
Trigger: GCGACTTCTCCAGCAGGCTCATCCCCAGCTGTGGCT...ATCAGACAGCATTACCCTTTGTCCTCCTCTAGCCCCAAGCTCCCAGAAGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGTGCTTCCTCACTGTCTaGTTCCTCCTCACTGCTCTC +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRCFLTV*FLLTAL
Trigger: GAGAGCAGTGAGGAGGAATCAGACAGTGAGGAAGCA...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GGTCCTGGCAACAGGAGGCTGAGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGCTGTTTCTTGCCATCTaGTATCCGACTGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: GPGNRRLSLTGFLGEDLQLFLAI*YPTGLL
Trigger: AAGGAGTCCAGTCGGATATCAGATGGCAAGAAACAG...CTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCTGTTGCCAGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR GCA 90 bp GTGAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATGGAGGCTACAGCCCCTaGCTTCCCAGGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: VSTLLLEVCKQHLTLLMNGGYSP*LPRGCW
Trigger: CCAGCACCCCCTGGGAAGGCAGGGGCTGTAGCCTCC...ATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp CTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGTTTCCCCACAGACTTTaGCTGTCCCACGGTTACTGC +
Preference number: 4 (lower is better)
Translates to: LTWASGVQEDKVGLVPPLFPHRL*LSHGYC
Trigger: GCAGTAACCGTGGGACAGGCAAAGTCTGTGGGGAAA...CAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTCTTGGCTTGAGCAGCTaGAGTGACAACTTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GPLEYRKIRWAWSHPWRCLGLSS*SDNFSR
Trigger: CCTGGAAAAGTTGTCACTGCAGCTGCTCAAGCCAAG...ACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGTGGGGCCGCCTTTCTTaGTGGAGACTCCTTAGTAGA +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRWGRLS*WRLLSR
Trigger: TCTACTAAGGAGTCTCCAGCAAGAAAGGCGGCCCCA...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGGGCTTAAGCTCTGGGTaGAGTGGAGCACATGAAGGT +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRGLSSG*SGAHEG
Trigger: ACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCC...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp ACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCGCCAGGAAACACTTCTaGCCGCTCTGCTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: TTPAWLTWASGVQEDKVGARKHF*PLCSFT
Trigger: AGTGAAGGAGCAGAGCGGCCAGAAGTGTTTCCTGGC...GCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGATGCTAGTCTTGGGGTaGCTTTGGCGGTTTCGGCTT +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRMLVLG*LWRFRL
Trigger: AAGCCGAAACCGCCAAAGCCACCCCAAGACTAGCAT...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp AGGGTAATGCTGTCTGATGGAAGGGCCAGGGTTCACACAGAAGCTTGGACCACAACACCATCCCAGGCTTaGCAGCAGCTCCAAAGGCCG +
Preference number: 4 (lower is better)
Translates to: RVMLSDGRARVHTEAWTTTPSQA*QQLQRP
Trigger: CGGCCTTTGGAGCTGCTGCCAAGCCTGGGATGGTGT...TGTGGTCCAAGCTTCTGTGTGAACCCTGGCCCTTCCATCAGACAGCATTACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATTTTTCAGCCTTGACCTaGACGGCTACAGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: EAWTTPAWLTWASGVQEDFSALT*TATGPA
Trigger: GGCAGGGCCTGTAGCCGTCCAGGTCAAGGCTGAAAA...ATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GACTGTGGCTTAAGCTCTGGGTGCAGTGGAGCACATGAAGGTATGCCACAGGTGGAGGCTGCTTTCACCTaGAGGCCTTTCCCCACAGAC +
Preference number: 4 (lower is better)
Translates to: DCGLSSGCSGAHEGMPQVEAAFT*RPFPTD
Trigger: GTCTGTGGGGAAAGGCCTCCAGGTGAAAGCAGCCTC...CACCTGTGGCATACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCCACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GACTGTGGCTTAAGCTCTGGGTGCAGTGGAGCACATGAAGGTATGCCACAGGTGCTTCCCAGGGAGTACTaGAGCAGTCCCTTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: DCGLSSGCSGAHEGMPQVLPREY*SSPLPQ
Trigger: TTGGGGCAAGGGACTGCTCCAGTACTCCCTGGGAAG...CACCTGTGGCATACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCCACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGTTTTCAGCTTTCACCTaGGTGACTGTAGGCCCCGTC +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRFSAFT*VTVGPV
Trigger: GACGGGGCCTACAGTCACCCAGGTGAAAGCTGAAAA...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGGTTTTCACCTGTGCTaGAGATGCAGCTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LTWASGVQEDKVGLVPPLGFHLC*RCSCFL
Trigger: GAGGAAGCAGCTGCATCTCCAGCACAGGTGAAAACC...CAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGGGTTTTCACCTGTGCTaGAGATGCAGCTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRGFHLC*RCSCFL
Trigger: GAGGAAGCAGCTGCATCTCCAGCACAGGTGAAAACC...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CACAGAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGACTGGTGGCTTCACCTTaGATGGAGACCTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: HRSLDHTSMADLGLWSTGLVASP*METSAW
Trigger: CCAAGCAGAGGTCTCCATCCAAGGTGAAGCCACCAG...TCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CATGAAGGTATGCCACAGGTGCTTGAGAGAGGGTCCTGGGCAGAGCTCATGGGACTGGGGGTTTCTCACTaGTGGCTTCACCTTGGATGG +
Preference number: 4 (lower is better)
Translates to: HEGMPQVLERGSWAELMGLGVSH*WLHLGW
Trigger: CCATCCAAGGTGAAGCCACCAGTGAGAAACCCCCAG...TCCCATGAGCTCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATACCTTCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp AGTGGGCATGGTCACCACATTGGTTCTGATGCCAGGAGTCAAGCACTGTGTAGCGCCTCACTGGCTTTCTaGGCGAGGACCTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SGHGHHIGSDARSQALCSASLAF*ARTFRA
Trigger: TGCCCTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGC...GCTACACAGTGCTTGACTCCTGGCATCAGAACCAATGTGGTGACCATGCCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR CCA 90 bp AGTGGGCATGGTCACCACATTGGTTCTGATGCCAGGAGTCAAGCACTGTGTAGCGAGGCTGAGCCTCACTaGCTTTCTGGGCGAGGACCT +
Preference number: 4 (lower is better)
Translates to: SGHGHHIGSDARSQALCSEAEPH*LSGRGP
Trigger: AGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTC...GCTACACAGTGCTTGACTCCTGGCATCAGAACCAATGTGGTGACCATGCCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR CCA 90 bp CACAGAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGACCAGCATGGCTGACTTaGGCCTCTGGAGTACAGGAA +
Preference number: 4 (lower is better)
Translates to: HRSLDHTSMADLGLWSTGPAWLT*ASGVQE
Trigger: TTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGG...TCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATAGAAGGGTTACGGGCTaGGCCAGGAAACACTTCTGG +
Preference number: 4 (lower is better)
Translates to: EAWTTPAWLTWASGVQEDRRVTG*ARKHFW
Trigger: CCAGAAGTGTTTCCTGGCTCAGCCCGTAACCCTTCT...ATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGTTTTTCTTTCATGCTTaGTGGCAAGTCCGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRFFFHA*WQVRPQ
Trigger: CTGGGGGCGGACTTGCCATCAAGCATGAAAGAAAAA...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTCTCCTCCTCAGTTTCTaGGACCAACGTAGTATTTGC +
Preference number: 4 (lower is better)
Translates to: GPLEYRKIRWAWSHPWRCLLLSF*DQRSIC
Trigger: GCAAATACTACGTTGGTCTCAGAAACTGAGGAGGAG...ACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGCCTGAAGGCTTCGCCTaGGCAGGCGCCTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: EHPIAGGVQTASDLTDELPEGFA*AGASSS
Trigger: TGAGGAGGAGGCGCCTGCTCAGGCGAAGCCTTCAGG...CAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp AGAAGCTTCTGGGAGCTTGGGGCTAGAGGAGGACAAAGGGTAATGCTGTCTGATTGGGCTTTTCAGCCTTaGCCTGGACGGCTACAGGCC +
Preference number: 4 (lower is better)
Translates to: RSFWELGARGGQRVMLSDWAFQP*PGRLQA
Trigger: GGCCTGTAGCCGTCCAGGTCAAGGCTGAAAAGCCCA...ATCAGACAGCATTACCCTTTGTCCTCCTCTAGCCCCAAGCTCCCAGAAGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATGGGCAGGCCTTGGTCTaGGGAATTTTCAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: EAWTTPAWLTWASGVQEDGQALV*GIFRAG
Trigger: ACCAGCTCTGAAAATTCCTCAGACCAAGGCCTGCCC...ATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp AGAAGCTTCTGGGAGCTTGGGGCTAGAGGAGGACAAAGGGTAATGCTGTCTGATGAGCCAAGGCAGCTCTaGTCTGGTGGGTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: RSFWELGARGGQRVMLSDEPRQL*SGGSSL
Trigger: CAGGGAAGACCCACCAGATCAGAGCTGCCTTGGCTC...ATCAGACAGCATTACCCTTTGTCCTCCTCTAGCCCCAAGCTCCCAGAAGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GACTGTGGCTTAAGCTCTGGGTGCAGTGGAGCACATGAAGGTATGCCACAGGTGGTGCAGTGGAGCACATaGAGGTATGCCACAGGTGCT +
Preference number: 4 (lower is better)
Translates to: DCGLSSGCSGAHEGMPQVVQWST*RYATGA
Trigger: AGCACCTGTGGCATACCTTCATGTGCTCCACTGCAC...CACCTGTGGCATACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCCACAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp CTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTTTCTTAGCTTGCAGTaGCGCATCTTCCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LGPLEYRKIRWAWSHPWRFLSLQ*RIFLCL
Trigger: AAGGCAGAGGAAGATGCGGCACTGCAAGCTAAGAAA...CCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp CTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGCGGGTTTTCTTAGCTTaGAGTGCCGCATCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LTWASGVQEDKVGLVPPLRVFLA*SAASSS
Trigger: AGAGGAAGATGCGGCACTGCAAGCTAAGAAAACCCG...CAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp CTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGGCTTTTTCTTTCATaGTTGATGGCAAGTCCGCCC +
Preference number: 4 (lower is better)
Translates to: LGPLEYRKIRWAWSHPWRWLFLS*LMASPP
Trigger: GGGCGGACTTGCCATCAAGCATGAAAGAAAAAGCCA...CCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp ACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCAGCTGCATTCATGGCTaGCAGTGCCTCTCTGTCACT +
Preference number: 4 (lower is better)
Translates to: TTPAWLTWASGVQEDKVGSCIHG*QCLSVT
Trigger: AGTGACAGAGAGGCACTGGCAGCCATGAATGCAGCT...GCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp AGGGTAATGCTGTCTGATGGAAGGGCCAGGGTTCACACAGAAGCTTGGACCACAAGCTGCAGTCATGGCTaGTGGTGCCTCCTCACTGTC +
Preference number: 4 (lower is better)
Translates to: RVMLSDGRARVHTEAWTTSCSHG*WCLLTV
Trigger: GACAGTGAGGAGGCACCAGCAGCCATGACTGCAGCT...TGTGGTCCAAGCTTCTGTGTGAACCCTGGCCCTTCCATCAGACAGCATTACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GTGAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATGTCATCCTGCTTCCCTaGCTGGGCAGCCGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: VSTLLLEVCKQHLTLLMNVILLP*LGSRRP
Trigger: GGGCCTTCGGCTGCCCAGGCAGGGAAGCAGGATGAC...ATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp TCCGCCCCCAGGACTGAGGAGTTGGTAGATGCTAGTCTTGGGGCTAGTATGATCTCCCAGAAAGAAGGTTaGCCACCGTCTTCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: SAPRTEELVDASLGASMISQKEG*PPSSQW
Trigger: CCACTGGGAAGACGGTGGCCAACCTTCTTTCTGGGA...GATCATACTAGCCCCAAGACTAGCATCTACCAACTCCTCAGTCCTGGGGGCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR CCA 90 bp GAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGCTGGAGCTGTCGGCCTaGCCCGCTGACACCATCCCA +
Preference number: 4 (lower is better)
Translates to: EHPIAGGVQTASDLTDELLELSA*PADTIP
Trigger: TGGGATGGTGTCAGCGGGCCAGGCCGACAGCTCCAG...CAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GAGACCAACGTAGTATTTGCTGAGGGCTCTGCTGACTTCCTGGGAGACTTCCCATCTCATCACTGGAGCTaGAGGTGTCCTCGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ETNVVFAEGSADFLGDFPSHHWS*RCPRWS
Trigger: GCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGA...TGGGAAGTCTCCCAGGAAGTCAGCAGAGCCCTCAGCAAATACTACGTTGGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR CCA 90 bp GTGAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATCCGGGGCCACAGCTGTaGGCACCTCTCCATCACTGC +
Preference number: 4 (lower is better)
Translates to: VSTLLLEVCKQHLTLLMNPGPQL*APLHHC
Trigger: GCAGTGATGGAGAGGTGCCCACAGCTGTGGCCCCGG...ATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTCAGATGCAGTGGTATTaGTTTTCTTTGGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GPLEYRKIRWAWSHPWRCQMQWY*FSLGRP
Trigger: AGGCCTGCCCAAAGAAAACCAATACCACTGCATCTG...ACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CATGAAGGTATGCCACAGGTGCTTGAGAGAGGGTCCTGGGCAGAGCTCATGGGATTTTCAGCTTTCACCTaGGTGACTGTAGGCCCCGTC +
Preference number: 4 (lower is better)
Translates to: HEGMPQVLERGSWAELMGFSAFT*VTVGPV
Trigger: GACGGGGCCTACAGTCACCCAGGTGAAAGCTGAAAA...TCCCATGAGCTCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATACCTTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp ACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCTGGCTTCACCTTGGATaGAGACCTCTGCTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TTPAWLTWASGVQEDKVGWLHLG*RPLLGL
Trigger: CAAGCCAAGCAGAGGTCTCCATCCAAGGTGAAGCCA...GCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GACTGTGGCTTAAGCTCTGGGTGCAGTGGAGCACATGAAGGTATGCCACAGGTGCTGGGGGTTTCTCACTaGTGGCTTCACCTTGGATGG +
Preference number: 4 (lower is better)
Translates to: DCGLSSGCSGAHEGMPQVLGVSH*WLHLGW
Trigger: CCATCCAAGGTGAAGCCACCAGTGAGAAACCCCCAG...CACCTGTGGCATACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCCACAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGGATGAGGCTTTGACCTaGGCTGGTTTTACTGAGGGT +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRDEALT*AGFTEG
Trigger: ACCCTCAGTAAAACCAGCCCAGGTCAAAGCCTCATC...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGGCCGCCTTTCTTGCTaGAGACTCCTTAGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: LTWASGVQEDKVGLVPPLGRLSC*RLLSRN
Trigger: GTTTCTACTAAGGAGTCTCCAGCAAGAAAGGCGGCC...CAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGCACCTTCCCAGGGGCTaGGGCCGCCTTTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: EHPIAGGVQTASDLTDELHLPRG*GRLSCW
Trigger: CCAGCAAGAAAGGCGGCCCCAGCCCCTGGGAAGGTG...CAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGATTCAAGAAGACTCCTaGTCCTGGGCAGAGGTCACA +
Preference number: 4 (lower is better)
Translates to: LTWASGVQEDKVGLVPPLIQEDS*SWAEVT
Trigger: TGTGACCTCTGCCCAGGACCAGGAGTCTTCTTGAAT...CAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394269.7
CDS-3UTR CCA 90 bp GAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATTACAGGAAGATAAGGTaGGCCTGGTCCCACCCTTGG +
Preference number: 4 (lower is better)
Translates to: EAWTTPAWLTWASGVQEDYRKIR*AWSHPW
Trigger: CCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA...ATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GTGAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATCTGGGACAGGGGAGCTaGTGCTCTGAGGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: VSTLLLEVCKQHLTLLMNLGQGS*CSEVPG
Trigger: GCCAGGCACCTCAGAGCACCAGCTCCCCTGTCCCAG...ATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp AGGGTAATGCTGTCTGATGGAAGGGCCAGGGTTCACACAGAAGCTTGGACCACACTGGTCCTGGGTCAGTaGCAGCTCTTCCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: RVMLSDGRARVHTEAWTTLVLGQ*QLFLTA
Trigger: AGCAGTGAGGAAGAGCTGCCACTGACCCAGGACCAG...TGTGGTCCAAGCTTCTGTGTGAACCCTGGCCCTTCCATCAGACAGCATTACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513538.2
CDS-3UTR CCA 90 bp AGGGTAATGCTGTCTGATGGAAGGGCCAGGGTTCACACAGAAGCTTGGACCACAGAAGACTCCTGGTCCTaGGTCAGTGGCAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RVMLSDGRARVHTEAWTTEDSWS*VSGSSS
Trigger: GGAAGAGCTGCCACTGACCCAGGACCAGGAGTCTTC...TGTGGTCCAAGCTTCTGTGTGAACCCTGGCCCTTCCATCAGACAGCATTACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513538.2
CDS-3UTR TCA 90 bp AGAAGCTTCTGGGAGCTTGGGGCTAGAGGAGGACAAAGGGTAATGCTGTCTGATTATGCCACAGGTGCTTaGGAGAGGGTCCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: RSFWELGARGGQRVMLSDYATGA*ERVLGR
Trigger: TCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATA...ATCAGACAGCATTACCCTTTGTCCTCCTCTAGCCCCAAGCTCCCAGAAGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GACTGTGGCTTAAGCTCTGGGTGCAGTGGAGCACATGAAGGTATGCCACAGGTGAAGGGTAATGCTGTCTaGTGGAAGGGCCAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: DCGLSSGCSGAHEGMPQVKGNAV*WKGQGS
Trigger: TGAACCCTGGCCCTTCCATCAGACAGCATTACCCTT...CACCTGTGGCATACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCCACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GACTGTGGCTTAAGCTCTGGGTGCAGTGGAGCACATGAAGGTATGCCACAGGTGTGTGCCATTGGAAAGTaGGAGGCAGTGAGCACCCTA +
Preference number: 4 (lower is better)
Translates to: DCGLSSGCSGAHEGMPQVCAIGK*EAVSTL
Trigger: TAGGGTGCTCACTGCCTCTCACTTTCCAATGGCACA...CACCTGTGGCATACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCCACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGCACTTCTGGCCGCTCTaGTCCTTCACTTCCCGCGCC +
Preference number: 4 (lower is better)
Translates to: EHPIAGGVQTASDLTDELHFWPL*SFTSRA
Trigger: GGCGCGGGAAGTGAAGGAGCAGAGCGGCCAGAAGTG...CAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGTTTCTTAGCTTGCAGTaGCGCATCTTCCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRFLSLQ*RIFLCL
Trigger: AAGGCAGAGGAAGATGCGGCACTGCAAGCTAAGAAA...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp ACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGATTCCTCCTCACTaGTCTCAGAGTCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TTPAWLTWASGVQEDKVGLIPPH*SQSLPA
Trigger: AGCAGGAAGACTCTGAGAGCAGTGAGGAGGAATCAG...GCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGCTGGCTTCGTGTCCCTaGAGGGGCCTCCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: EHPIAGGVQTASDLTDELLASCP*RGLLLT
Trigger: AGTGAGGAGGAGGCCCCTGCAGGGACACGAAGCCAG...CAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp CTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGCTATTGCTGGAGGTGTaGAAACAGCATCTGACCTTA +
Preference number: 4 (lower is better)
Translates to: LGPLEYRKIRWAWSHPWRLLLEV*KQHLTL
Trigger: TAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAG...CCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp AGAAGCTTCTGGGAGCTTGGGGCTAGAGGAGGACAAAGGGTAATGCTGTCTGATCTGGGGCCAGGGTCTTaGTTCTGGCAGGTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: RSFWELGARGGQRVMLSDLGPGS*FWQVWS
Trigger: ACTCCAAACCTGCCAGAAGCAAGACCCTGGCCCCAG...ATCAGACAGCATTACCCTTTGTCCTCCTCTAGCCCCAAGCTCCCAGAAGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513538.2
CDS-3UTR CCA 90 bp GTGAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATCAGGGCCTTGGCAGCTaGCGTCTCCTCCTCACTGTC +
Preference number: 4 (lower is better)
Translates to: VSTLLLEVCKQHLTLLMNQGLGS*RLLLTV
Trigger: GACAGTGAGGAGGAGACGCCAGCTGCCAAGGCCCTG...ATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGCAGATGCAGTGGTATTaGTTTTCTTTGGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRQMQWY*FSLGRP
Trigger: AGGCCTGCCCAAAGAAAACCAATACCACTGCATCTG...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp AGAAGCTTCTGGGAGCTTGGGGCTAGAGGAGGACAAAGGGTAATGCTGTCTGATGAGGCTGCTTTCACCTaGAGGCCTTTCCCCACAGAC +
Preference number: 4 (lower is better)
Translates to: RSFWELGARGGQRVMLSDEAAFT*RPFPTD
Trigger: GTCTGTGGGGAAAGGCCTCCAGGTGAAAGCAGCCTC...ATCAGACAGCATTACCCTTTGTCCTCCTCTAGCCCCAAGCTCCCAGAAGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GACTGTGGCTTAAGCTCTGGGTGCAGTGGAGCACATGAAGGTATGCCACAGGTGTGGCTTCACCTTGGATaGAGACCTCTGCTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: DCGLSSGCSGAHEGMPQVWLHLG*RPLLGL
Trigger: CAAGCCAAGCAGAGGTCTCCATCCAAGGTGAAGCCA...CACCTGTGGCATACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCCACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GTGAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATGGCCTTCCCCACAGATaGCACAGATGCTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: VSTLLLEVCKQHLTLLMNGLPHR*HRCWAP
Trigger: AGGGGCCCAGCATCTGTGCCATCTGTGGGGAAGGCC...ATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GACTGTGGCTTAAGCTCTGGGTGCAGTGGAGCACATGAAGGTATGCCACAGGTGCCTGGGCAGAGCTCATaGGATTCAAGAAGACTCCTG +
Preference number: 4 (lower is better)
Translates to: DCGLSSGCSGAHEGMPQVPGQSS*DSRRLL
Trigger: CAGGAGTCTTCTTGAATCCCATGAGCTCTGCCCAGG...CACCTGTGGCATACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCCACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATCCTGGGCAGAGCTCATaGGATTCAAGAAGACTCCTG +
Preference number: 4 (lower is better)
Translates to: EAWTTPAWLTWASGVQEDPGQSS*DSRRLL
Trigger: CAGGAGTCTTCTTGAATCCCATGAGCTCTGCCCAGG...ATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATGTTCACACAGAAGCTTaGACCACACCAGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: EAWTTPAWLTWASGVQEDVHTEA*TTPAWL
Trigger: CAGCCATGCTGGTGTGGTCCAAGCTTCTGTGTGAAC...ATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CATGAAGGTATGCCACAGGTGCTTGAGAGAGGGTCCTGGGCAGAGCTCATGGGACCAGGGTCTTGCTTCTaGCAGGTTTGGAGTTACTGT +
Preference number: 4 (lower is better)
Translates to: HEGMPQVLERGSWAELMGPGSCF*QVWSYC
Trigger: ACAGTAACTCCAAACCTGCCAGAAGCAAGACCCTGG...TCCCATGAGCTCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATACCTTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513538.2
CDS-3UTR CCA 90 bp TTCCCAGGGGCTGGGGCCGCCTTTCTTGCTGGAGACTCCTTAGTAGAAACTGATGCAGACTCAGGAAGCTaGGCATGGTGGTATGTGCAT +
Preference number: 4 (lower is better)
Translates to: FPGAGAAFLAGDSLVETDADSGS*AWWYVH
Trigger: ATGCACATACCACCATGCCCAGCTTCCTGAGTCTGC...ATCAGTTTCTACTAAGGAGTCTCCAGCAAGAAAGGCGGCCCCAGCCCCTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR TCA 90 bp GACTGTGGCTTAAGCTCTGGGTGCAGTGGAGCACATGAAGGTATGCCACAGGTGTTTTTCTTTCATGCTTaGTGGCAAGTCCGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: DCGLSSGCSGAHEGMPQVFFFHA*WQVRPQ
Trigger: CTGGGGGCGGACTTGCCATCAAGCATGAAAGAAAAA...CACCTGTGGCATACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCCACAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATGTCGGCCTGGCCCGCTaGCACCATCCCAGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: GGVQTASDLTDELITMWYVGLAR*HHPRLG
Trigger: GCCAAGCCTGGGATGGTGTCAGCGGGCCAGGCCGAC...ATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGCTGGTGGGTCTTCCCTaGAGGCTTCACCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: EHPIAGGVQTASDLTDELLVGLP*RLHLSQ
Trigger: CTGGCTCAGGTGAAGCCTTCAGGGAAGACCCACCAG...CAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GTGAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATCTGGTGGGTCTTCCCTaGAGGCTTCACCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: VSTLLLEVCKQHLTLLMNLVGLP*RLHLSQ
Trigger: CTGGCTCAGGTGAAGCCTTCAGGGAAGACCCACCAG...ATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp AGGGTAATGCTGTCTGATGGAAGGGCCAGGGTTCACACAGAAGCTTGGACCACAAAGGGTAATGCTGTCTaGTGGAAGGGCCAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: RVMLSDGRARVHTEAWTTKGNAV*WKGQGS
Trigger: TGAACCCTGGCCCTTCCATCAGACAGCATTACCCTT...TGTGGTCCAAGCTTCTGTGTGAACCCTGGCCCTTCCATCAGACAGCATTACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GACTGTGGCTTAAGCTCTGGGTGCAGTGGAGCACATGAAGGTATGCCACAGGTGCTGTCCCACGGTTACTaGAAGACCTGTCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: DCGLSSGCSGAHEGMPQVLSHGY*KTCLLF
Trigger: GAAGAGAAGACAGGTCTTGCAGTAACCGTGGGACAG...CACCTGTGGCATACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCCACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATCTGATTCCTCCTCACTaGTCTCAGAGTCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: EAWTTPAWLTWASGVQEDLIPPH*SQSLPA
Trigger: AGCAGGAAGACTCTGAGAGCAGTGAGGAGGAATCAG...ATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp AGGGTAATGCTGTCTGATGGAAGGGCCAGGGTTCACACAGAAGCTTGGACCACATGTCTGATTCCTCGCTaGTGCTCCCTGAGTCATCCT +
Preference number: 4 (lower is better)
Translates to: RVMLSDGRARVHTEAWTTCLIPR*CSLSHP
Trigger: AGGATGACTCAGGGAGCAGCAGCGAGGAATCAGACA...TGTGGTCCAAGCTTCTGTGTGAACCCTGGCCCTTCCATCAGACAGCATTACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp AGTGGGCATGGTCACCACATTGGTTCTGATGCCAGGAGTCAAGCACTGTGTAGCTGTCTGATTCCTCGCTaGTGCTCCCTGAGTCATCCT +
Preference number: 4 (lower is better)
Translates to: SGHGHHIGSDARSQALCSCLIPR*CSLSHP
Trigger: AGGATGACTCAGGGAGCAGCAGCGAGGAATCAGACA...GCTACACAGTGCTTGACTCCTGGCATCAGAACCAATGTGGTGACCATGCCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR GCA 90 bp GACTGTGGCTTAAGCTCTGGGTGCAGTGGAGCACATGAAGGTATGCCACAGGTGGAGCACATGAAGGTATaGCACAGGTGCTTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: DCGLSSGCSGAHEGMPQVEHMKV*HRCLRE
Trigger: CTCTCTCAAGCACCTGTGGCATACCTTCATGTGCTC...CACCTGTGGCATACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCCACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGCTATTGCTGGAGGTGTaGAAACAGCATCTGACCTTA +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRLLLEV*KQHLTL
Trigger: TAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAG...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp AGAAGCTTCTGGGAGCTTGGGGCTAGAGGAGGACAAAGGGTAATGCTGTCTGATCCCAGTGGCAGGGTGTaGCATGGAATTCCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: RSFWELGARGGQRVMLSDPSGRV*HGIPSL
Trigger: AAGACTGGGAATTCCATGCCACACCCTGCCACTGGG...ATCAGACAGCATTACCCTTTGTCCTCCTCTAGCCCCAAGCTCCCAGAAGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp AGAAGCTTCTGGGAGCTTGGGGCTAGAGGAGGACAAAGGGTAATGCTGTCTGATTCCCAGAAAGAAGGTTaGCCACCGTCTTCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RSFWELGARGGQRVMLSDSQKEG*PPSSQW
Trigger: CCACTGGGAAGACGGTGGCCAACCTTCTTTCTGGGA...ATCAGACAGCATTACCCTTTGTCCTCCTCTAGCCCCAAGCTCCCAGAAGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGAGACCGTCCTGCTTCCCCACCTaGACCTGGGCGGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: ELITMWYVIFKGRWFMRPSCFPT*TWAAAG
Trigger: GCCTGCAGCCGCCCAGGTCCAGGTGGGGAAGCAGGA...CGGTCTCATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGAGGAATTTTCAGAGCTaGTTTTGCCTGAGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: LTWASGVQEDKVGLVPPLRNFQS*FCLSCS
Trigger: ACTGCAGCTCAGGCAAAACCAGCTCTGAAAATTCCT...CAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGAGATGGCACAGATGCTaGGCCCCTCGCCAAGACGGT +
Preference number: 4 (lower is better)
Translates to: EHPIAGGVQTASDLTDELRWHRC*APRQDG
Trigger: ACCGTCTTGGCGAGGGGCCCAGCATCTGTGCCATCT...CAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CACCACATTGGTTCTGATGCCAGGAGTCAAGCACTGTGTAGCGGGGATCACGTCTCTTTGACACCTGAGTaGCTGGTCCCTCCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: HHIGSDARSQALCSGDHVSLTPE*LVPPVS
Trigger: AGAAACAGGAGGGACCAGCCACTCAGGTGTCAAAGA...GACGTGATCCCCGCTACACAGTGCTTGACTCCTGGCATCAGAACCAATGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR CCA 90 bp GAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGAGACCGGCTTCTTGGCCCTCTTaGCTGGGGGCAGGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: ELITMWYVIFKGRWFMRPASWPS*LGAGPL
Trigger: GAGGGGCCCTGCCCCCAGCCAAGAGGGCCAAGAAGC...CGGTCTCATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGTGTAATCTGTGCCATTaGAAAGTGAGAGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRCNLCH*KVRGSE
Trigger: CTCACTGCCTCTCACTTTCCAATGGCACAGATTACA...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR CAA 72 bp ATGCTTGATGGCAAGTCCGCCCCCAGGACTGAGGAGTaGGTAGATGCTAGTCTTGGGGCTAGTATGATCTCA +
Preference number: 4 (lower is better)
Translates to: MLDGKSAPRTEE*VDASLGASMIS
Trigger: TGAGATCATACTAGCCCCAAGACTAGCATCTACCAACTCCTCAGTCCTGGGGGCGGACTTGCCATCAAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR TCA 90 bp GCCTTTCTTGCTGGAGACTCCTTAGTAGAAACTGATGAGGCTTTGACCTGGGCTAGAAGGGTTACGGGCTaGGCCAGGAAACACTTCTGG +
Preference number: 4 (lower is better)
Translates to: AFLAGDSLVETDEALTWARRVTG*ARKHFW
Trigger: CCAGAAGTGTTTCCTGGCTCAGCCCGTAACCCTTCT...AGCCCAGGTCAAAGCCTCATCAGTTTCTACTAAGGAGTCTCCAGCAAGAAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR TCA 90 bp GACTGTGGCTTAAGCTCTGGGTGCAGTGGAGCACATGAAGGTATGCCACAGGTGCTCCTCCTCAGTTTCTaGGACCAACGTAGTATTTGC +
Preference number: 4 (lower is better)
Translates to: DCGLSSGCSGAHEGMPQVLLLSF*DQRSIC
Trigger: GCAAATACTACGTTGGTCTCAGAAACTGAGGAGGAG...CACCTGTGGCATACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCCACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GTGAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATCTCACTACTGCTCTCTaGGTCCTCCTCCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: VSTLLLEVCKQHLTLLMNLTTAL*VLLPLP
Trigger: GGGAAGTGGGAGGAGGACTCAGAGAGCAGTAGTGAG...ATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATGGAGGCTACAGCCCCTaGCTTCCCAGGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GGVQTASDLTDELITMWYGGYSP*LPRGCW
Trigger: CCAGCACCCCCTGGGAAGGCAGGGGCTGTAGCCTCC...ATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp AGGGTAATGCTGTCTGATGGAAGGGCCAGGGTTCACACAGAAGCTTGGACCACACTGTCCCACGGTTACTaGAAGACCTGTCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: RVMLSDGRARVHTEAWTTLSHGY*KTCLLF
Trigger: GAAGAGAAGACAGGTCTTGCAGTAACCGTGGGACAG...TGTGGTCCAAGCTTCTGTGTGAACCCTGGCCCTTCCATCAGACAGCATTACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp AGAAGCTTCTGGGAGCTTGGGGCTAGAGGAGGACAAAGGGTAATGCTGTCTGATTGGGGCCGCCTTTCTTaGTGGAGACTCCTTAGTAGA +
Preference number: 4 (lower is better)
Translates to: RSFWELGARGGQRVMLSDWGRLS*WRLLSR
Trigger: TCTACTAAGGAGTCTCCAGCAAGAAAGGCGGCCCCA...ATCAGACAGCATTACCCTTTGTCCTCCTCTAGCCCCAAGCTCCCAGAAGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp CTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTACTTTTGTAATCTGTaGCATTGGAAAGTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LGPLEYRKIRWAWSHPWRYFCNL*HWKVRG
Trigger: GCCTCTCACTTTCCAATGGCACAGATTACAAAAGTA...CCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GCCTTTCTTGCTGGAGACTCCTTAGTAGAAACTGATGAGGCTTTGACCTGGGCTGCCAGGAAACACTTCTaGCCGCTCTGCTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: AFLAGDSLVETDEALTWAARKHF*PLCSFT
Trigger: AGTGAAGGAGCAGAGCGGCCAGAAGTGTTTCCTGGC...AGCCCAGGTCAAAGCCTCATCAGTTTCTACTAAGGAGTCTCCAGCAAGAAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR CCA 90 bp CCCAGGACTGAGGAGTTGGTAGATGCTAGTCTTGGGGCTAGTATGATCTCAAACCCCAGTGGCAGGGTGTaGCATGGAATTCCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: PRTEELVDASLGASMISNPSGRV*HGIPSL
Trigger: AAGACTGGGAATTCCATGCCACACCCTGCCACTGGG...GTTTGAGATCATACTAGCCCCAAGACTAGCATCTACCAACTCCTCAGTCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR CCA 90 bp GTGAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTTGCTGAAGGTGCTCTaGCGGCAGCTGGGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: VSTLLLEVCKQHLTLLMNLLKVL*RQLGWL
Trigger: AAGCCAACCCAGCTGCCGCCAGAGCACCTTCAGCAA...ATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GTTGTTCTTTACTTTTGTAATCTGTGCCATTGGAAAGTGAGAGGCAGTGAGCACTCCTGCTTCCCTGCCTaGGCAGCCGAAGGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: VVLYFCNLCHWKVRGSEHSCFPA*AAEGPV
Trigger: GACAGGGCCTTCGGCTGCCCAGGCAGGGAAGCAGGA...GTGCTCACTGCCTCTCACTTTCCAATGGCACAGATTACAAAAGTAAAGAACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp CATGAAGGTATGCCACAGGTGCTTGAGAGAGGGTCCTGGGCAGAGCTCATGGGATGTAATCTGTGCCATTaGAAAGTGAGAGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: HEGMPQVLERGSWAELMGCNLCH*KVRGSE
Trigger: CTCACTGCCTCTCACTTTCCAATGGCACAGATTACA...TCCCATGAGCTCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATACCTTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp TCCGCCCCCAGGACTGAGGAGTTGGTAGATGCTAGTCTTGGGGCTAGTATGATCATGGCAAGACTTTGTTaGCTTTGGCGGTTTCGGCTT +
Preference number: 4 (lower is better)
Translates to: SAPRTEELVDASLGASMIMARLC*LWRFRL
Trigger: AAGCCGAAACCGCCAAAGCCAACAAAGTCTTGCCAT...GATCATACTAGCCCCAAGACTAGCATCTACCAACTCCTCAGTCCTGGGGGCGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR CCA 90 bp TCCGCCCCCAGGACTGAGGAGTTGGTAGATGCTAGTCTTGGGGCTAGTATGATCTCAGGAAGCTGGGCATaGTGGTATGTGCATGGAATT +
Preference number: 4 (lower is better)
Translates to: SAPRTEELVDASLGASMISGSWA*WYVHGI
Trigger: AATTCCATGCACATACCACCATGCCCAGCTTCCTGA...GATCATACTAGCCCCAAGACTAGCATCTACCAACTCCTCAGTCCTGGGGGCGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR TCA 90 bp TCTGAGACCAACGTAGTATTTGCTGAGGGCTCTGCTGACTTCCTGGGAGACTTCTTTTTCTTTCATGCTTaGTGGCAAGTCCGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: SETNVVFAEGSADFLGDFFFFHA*WQVRPQ
Trigger: CTGGGGGCGGACTTGCCATCAAGCATGAAAGAAAAA...GAAGTCTCCCAGGAAGTCAGCAGAGCCCTCAGCAAATACTACGTTGGTCTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR TCA 90 bp GAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGCTGAGAGGTTTTTCCTaGGGCCTTCGCCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: EHPIAGGVQTASDLTDELLRGFS*GLRLKQ
Trigger: CTGCTTCAGGCGAAGGCCTCAGGAAAAACCTCTCAG...CAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GTGAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATCTTGAGCAGCTGCAGTaGCAACTTTTCCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VSTLLLEVCKQHLTLLMNLEQLQ*QLFQGL
Trigger: CAGCCCCTGGAAAAGTTGTCACTGCAGCTGCTCAAG...ATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGGACCTCTGCTTGGCTTaGGCAGCTGCAGTGACAACT +
Preference number: 4 (lower is better)
Translates to: EHPIAGGVQTASDLTDELDLCLA*AAAVTT
Trigger: AGTTGTCACTGCAGCTGCTCAAGCCAAGCAGAGGTC...CAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GTGAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATGAAAGTGAGAGGCAGTaGGCACCCTATTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: VSTLLLEVCKQHLTLLMNESERQ*APYCWR
Trigger: CCTCCAGCAATAGGGTGCTCACTGCCTCTCACTTTC...ATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp CCCTCCTCCTCAGTTTCTGAGACCAACGTAGTATTTGCTGAGGGCTCTGCTGACTTTCTTAGCTTGCAGTaGCGCATCTTCCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: PSSSVSETNVVFAEGSADFLSLQ*RIFLCL
Trigger: AAGGCAGAGGAAGATGCGGCACTGCAAGCTAAGAAA...GTCAGCAGAGCCCTCAGCAAATACTACGTTGGTCTCAGAAACTGAGGAGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR GCA 90 bp GTTTCTGAGACCAACGTAGTATTTGCTGAGGGCTCTGCTGACTTCCTGGGAGACCGGGTTTTCTTAGCTTaGAGTGCCGCATCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: VSETNVVFAEGSADFLGDRVFLA*SAASSS
Trigger: AGAGGAAGATGCGGCACTGCAAGCTAAGAAAACCCG...GTCTCCCAGGAAGTCAGCAGAGCCCTCAGCAAATACTACGTTGGTCTCAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR GCA 90 bp CCCTCCTCCTCAGTTTCTGAGACCAACGTAGTATTTGCTGAGGGCTCTGCTGACTGGCTTTTTCTTTCATaGTTGATGGCAAGTCCGCCC +
Preference number: 4 (lower is better)
Translates to: PSSSVSETNVVFAEGSADWLFLS*LMASPP
Trigger: GGGCGGACTTGCCATCAAGCATGAAAGAAAAAGCCA...GTCAGCAGAGCCCTCAGCAAATACTACGTTGGTCTCAGAAACTGAGGAGGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR GCA 90 bp GTTGTTCTTTACTTTTGTAATCTGTGCCATTGGAAAGTGAGAGGCAGTGAGCACTGTCTGGGCCTGAGCTaGTGTAGCCACGGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: VVLYFCNLCHWKVRGSEHCLGLS*CSHGLP
Trigger: GGGAAGGCCGTGGCTACAGCAGCTCAGGCCCAGACA...GTGCTCACTGCCTCTCACTTTCCAATGGCACAGATTACAAAAGTAAAGAACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GTTGTTCTTTACTTTTGTAATCTGTGCCATTGGAAAGTGAGAGGCAGTGAGCACTTCCCTGCCTTGGTCTaGGAGGCTACAGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: VVLYFCNLCHWKVRGSEHFPALV*EATAPA
Trigger: GGCAGGGGCTGTAGCCTCCCAGACCAAGGCAGGGAA...GTGCTCACTGCCTCTCACTTTCCAATGGCACAGATTACAAAAGTAAAGAACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GTTGTTCTTTACTTTTGTAATCTGTGCCATTGGAAAGTGAGAGGCAGTGAGCACCCTGAAGCAGGGCCTTaGCAGCTGGCGTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VVLYFCNLCHWKVRGSEHPEAGP*QLASPP
Trigger: AGGAGGAGACGCCAGCTGCCAAGGCCCTGCTTCAGG...GTGCTCACTGCCTCTCACTTTCCAATGGCACAGATTACAAAAGTAAAGAACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp ACTGATGAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGCTTCCCGGGTGGCACTaGGCCGGCGCCTTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: TDELITMWYVIFKGRWFMLPGWH*AGAFPQ
Trigger: TTGGGGAAAGGCGCCGGCCCAGTGCCACCCGGGAAG...CATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTCATCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATGTGATACCCCACCTTCCCGGGTaGCACTGGGCCGGCGCCTTT +
Preference number: 4 (lower is better)
Translates to: VQTASDLTDELITMWYVIPHLPG*HWAGAF
Trigger: AAAGGCGCCGGCCCAGTGCCACCCGGGAAGGTGGGG...TATCACATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGAGACCGTGCTCTGGCGGCAGCTaGGTTGGCTTTGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: ELITMWYVIFKGRWFMRPCSGGS*VGFGLG
Trigger: ACCCAGGCCAAAGCCAACCCAGCTGCCGCCAGAGCA...CGGTCTCATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GTGAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATCTGGTGGCTTCACCTTaGATGGAGACCTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: VSTLLLEVCKQHLTLLMNLVASP*METSAW
Trigger: CCAAGCAGAGGTCTCCATCCAAGGTGAAGCCACCAG...ATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GCCGCCTTTCTTGCTGGAGACTCCTTAGTAGAAACTGATGAGGCTTTGACCTGGGGCCGCCTTTCTTGCTaGAGACTCCTTAGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: AAFLAGDSLVETDEALTWGRLSC*RLLSRN
Trigger: GTTTCTACTAAGGAGTCTCCAGCAAGAAAGGCGGCC...CCAGGTCAAAGCCTCATCAGTTTCTACTAAGGAGTCTCCAGCAAGAAAGGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR CCA 90 bp GTTGTTCTTTACTTTTGTAATCTGTGCCATTGGAAAGTGAGAGGCAGTGAGCACGCCCCTCCTTTGACCTaGGGTGTCACATCCCCCACC +
Preference number: 4 (lower is better)
Translates to: VVLYFCNLCHWKVRGSEHAPPLT*GVTSPT
Trigger: GGTGGGGGATGTGACACCCCAGGTCAAAGGAGGGGC...GTGCTCACTGCCTCTCACTTTCCAATGGCACAGATTACAAAAGTAAAGAACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp ACTGATGAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGGCAGGGCCCCTCCTTTaGCCTGGGGTGTCACATCCC +
Preference number: 4 (lower is better)
Translates to: TDELITMWYVIFKGRWFMAGPLL*PGVSHP
Trigger: GGGATGTGACACCCCAGGTCAAAGGAGGGGCCCTGC...CATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTCATCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGAGACCGCCACACCAGCATGGCTaGCTTGGGCCTCTGGAGTAC +
Preference number: 4 (lower is better)
Translates to: ELITMWYVIFKGRWFMRPPHQHG*LGPLEY
Trigger: GTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGG...CGGTCTCATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GTTGTTCTTTACTTTTGTAATCTGTGCCATTGGAAAGTGAGAGGCAGTGAGCACCAAAGGCCGGGACGCTaGCCTCCTCCTCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: VVLYFCNLCHWKVRGSEHQRPGR*PPPQFL
Trigger: CAGAAACTGAGGAGGAGGGCAGCGTCCCGGCCTTTG...GTGCTCACTGCCTCTCACTTTCCAATGGCACAGATTACAAAAGTAAAGAACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GACTGTGGCTTAAGCTCTGGGTGCAGTGGAGCACATGAAGGTATGCCACAGGTGTATCTGATTCCTCACTaGTTGAAGAATCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: DCGLSSGCSGAHEGMPQVYLIPH*LKNPLL
Trigger: CAGCAGAGGATTCTTCAAGCAGTGAGGAATCAGATA...CACCTGTGGCATACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCCACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGGGCTTAAGCTCTGGGTaGAGTGGAGCACATGAAGGT +
Preference number: 4 (lower is better)
Translates to: EHPIAGGVQTASDLTDELGLSSG*SGAHEG
Trigger: ACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCC...CAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGATGCTAGTCTTGGGGTaGCTTTGGCGGTTTCGGCTT +
Preference number: 4 (lower is better)
Translates to: EHPIAGGVQTASDLTDELMLVLG*LWRFRL
Trigger: AAGCCGAAACCGCCAAAGCCACCCCAAGACTAGCAT...CAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp AGAAGCTTCTGGGAGCTTGGGGCTAGAGGAGGACAAAGGGTAATGCTGTCTGATGGGTTGGCTTTGGCCTaGGTTTTCTTTACTGAGGTT +
Preference number: 4 (lower is better)
Translates to: RSFWELGARGGQRVMLSDGLALA*VFFTEV
Trigger: AACCTCAGTAAAGAAAACCCAGGCCAAAGCCAACCC...ATCAGACAGCATTACCCTTTGTCCTCCTCTAGCCCCAAGCTCCCAGAAGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp ACTGATGAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGCTTGGCCCTCTTGGCTaGGGGCAGGGCCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: TDELITMWYVIFKGRWFMLGPLG*GQGPSF
Trigger: AAAGGAGGGGCCCTGCCCCCAGCCAAGAGGGCCAAG...CATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTCATCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGAGACCGGAAGACTCCTGGTCCTaGGCAGAGGTCACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: ELITMWYVIFKGRWFMRPEDSWS*AEVTAA
Trigger: GGCAGCTGTGACCTCTGCCCAGGACCAGGAGTCTTC...CGGTCTCATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394269.7
CDS-3UTR CCA 90 bp TCTGAGACCAACGTAGTATTTGCTGAGGGCTCTGCTGACTTCCTGGGAGACTTCAGACTTTGTTGGCTTTaGCGGTTTCGGCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SETNVVFAEGSADFLGDFRLCWL*RFRLLL
Trigger: AAGCAGAAGCCGAAACCGCCAAAGCCAACAAAGTCT...GAAGTCTCCCAGGAAGTCAGCAGAGCCCTCAGCAAATACTACGTTGGTCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR TCA 90 bp GCCTTTCTTGCTGGAGACTCCTTAGTAGAAACTGATGAGGCTTTGACCTGGGCTCTCCTCCTCAGTTTCTaGGACCAACGTAGTATTTGC +
Preference number: 4 (lower is better)
Translates to: AFLAGDSLVETDEALTWALLLSF*DQRSIC
Trigger: GCAAATACTACGTTGGTCTCAGAAACTGAGGAGGAG...AGCCCAGGTCAAAGCCTCATCAGTTTCTACTAAGGAGTCTCCAGCAAGAAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR TCA 90 bp ACTGATGAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGAGCCACAGCTGGGGATaGGCCTGCTGGAGAAGTCGC +
Preference number: 4 (lower is better)
Translates to: TDELITMWYVIFKGRWFMSHSWG*ACWRSR
Trigger: GCGACTTCTCCAGCAGGCTCATCCCCAGCTGTGGCT...CATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTCATCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GTGAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATCTCCTCACTACTCTCTaGCTCCTCTTCTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: VSTLLLEVCKQHLTLLMNLLTTL*LLFWLL
Trigger: AAGAAGCCAGAAGAGGAGTCAGAGAGTAGTGAGGAG...ATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp ACTGATGAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGCACTTCTGGCCGCTCTaGTCCTTCACTTCCCGCGCC +
Preference number: 4 (lower is better)
Translates to: TDELITMWYVIFKGRWFMHFWPL*SFTSRA
Trigger: GGCGCGGGAAGTGAAGGAGCAGAGCGGCCAGAAGTG...CATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTCATCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGAGACCGTGCCGCATCTTCCTCTaGCTTCCGCTTCCGACCAAG +
Preference number: 4 (lower is better)
Translates to: ELITMWYVIFKGRWFMRPCRIFL*LPLPTK
Trigger: CTTGGTCGGAAGCGGAAGGCAGAGGAAGATGCGGCA...CGGTCTCATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGAGACCGTGTCCGATTCCTCGCTaGTGCTCTGCGAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ELITMWYVIFKGRWFMRPCPIPR*CSASPP
Trigger: AGGAGGACTCGCAGAGCAGCAGCGAGGAATCGGACA...CGGTCTCATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGAGACCGCCGATGACTCCTCGCTaGTCTCCGAGTTGTCCATGG +
Preference number: 4 (lower is better)
Translates to: ELITMWYVIFKGRWFMRPPMTPR*SPSCPW
Trigger: CCATGGACAACTCGGAGAGCAGCGAGGAGTCATCGG...CGGTCTCATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GTTGTTCTTTACTTTTGTAATCTGTGCCATTGGAAAGTGAGAGGCAGTGAGCACACTGGAGCAGTCCCTTaGCCCAAGGACCCCTTGACA +
Preference number: 4 (lower is better)
Translates to: VVLYFCNLCHWKVRGSEHTGAVP*PKDPLT
Trigger: TGTCAAGGGGTCCTTGGGGCAAGGGACTGCTCCAGT...GTGCTCACTGCCTCTCACTTTCCAATGGCACAGATTACAAAAGTAAAGAACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GTGAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATCTTGGCTTGAGCAGCTaGAGTGACAACTTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: VSTLLLEVCKQHLTLLMNLGLSS*SDNFSR
Trigger: CCTGGAAAAGTTGTCACTGCAGCTGCTCAAGCCAAG...ATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGAGACCGCGTCTGTCTCATCACTaGAGCTGGAGGTGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: ELITMWYVIFKGRWFMRPRLSHH*SWRCPR
Trigger: GCGAGGACACCTCCAGCTCCAGTGATGAGACAGACG...CGGTCTCATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATTGCAGTCATGGCTGCTaGTGCCTCCTCACTGTCCGC +
Preference number: 4 (lower is better)
Translates to: GGVQTASDLTDELITMWYCSHGC*CLLTVR
Trigger: GCGGACAGTGAGGAGGCACCAGCAGCCATGACTGCA...ATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp AGAAGCTTCTGGGAGCTTGGGGCTAGAGGAGGACAAAGGGTAATGCTGTCTGATAGGAATTTTCAGAGCTaGTTTTGCCTGAGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: RSFWELGARGGQRVMLSDRNFQS*FCLSCS
Trigger: ACTGCAGCTCAGGCAAAACCAGCTCTGAAAATTCCT...ATCAGACAGCATTACCCTTTGTCCTCCTCTAGCCCCAAGCTCCCAGAAGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp ACTGATGAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGTGCTCTGGCGGCAGCTaGGTTGGCTTTGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: TDELITMWYVIFKGRWFMCSGGS*VGFGLG
Trigger: ACCCAGGCCAAAGCCAACCCAGCTGCCGCCAGAGCA...CATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTCATCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GTTGTTCTTTACTTTTGTAATCTGTGCCATTGGAAAGTGAGAGGCAGTGAGCACTCAGAGGCCTTTACCTaGCTTCGTGTCCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VVLYFCNLCHWKVRGSEHSEAFT*LRVPAG
Trigger: CCCTGCAGGGACACGAAGCCAGGTAAAGGCCTCTGA...GTGCTCACTGCCTCTCACTTTCCAATGGCACAGATTACAAAAGTAAAGAACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GTTGTTCTTTACTTTTGTAATCTGTGCCATTGGAAAGTGAGAGGCAGTGAGCACAATTGTCCCTTTTGCTaGAGGTGCTCTGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: VVLYFCNLCHWKVRGSEHNCPFC*RCSGGS
Trigger: GCTGCCGCCAGAGCACCTTCAGCAAAAGGGACAATT...GTGCTCACTGCCTCTCACTTTCCAATGGCACAGATTACAAAAGTAAAGAACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GTTGTTCTTTACTTTTGTAATCTGTGCCATTGGAAAGTGAGAGGCAGTGAGCACCTTGGAGGTGTAGCCTaGGCAGGACTGTGGCTTAAG +
Preference number: 4 (lower is better)
Translates to: VVLYFCNLCHWKVRGSEHLGGVA*AGLWLK
Trigger: CTTAAGCCACAGTCCTGCTCAGGCTACACCTCCAAG...GTGCTCACTGCCTCTCACTTTCCAATGGCACAGATTACAAAAGTAAAGAACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATAGCTGCAGTCATGGCTaGTGGTGCCTCCTCACTGTC +
Preference number: 4 (lower is better)
Translates to: GGVQTASDLTDELITMWYSCSHG*WCLLTV
Trigger: GACAGTGAGGAGGCACCAGCAGCCATGACTGCAGCT...ATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGAGACCGGTCTTGGGGTGGCTTTaGCGGTTTCGGCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: ELITMWYVIFKGRWFMRPVLGWL*RFRLLL
Trigger: AAGCAGAAGCCGAAACCGCCAAAGCCACCCCAAGAC...CGGTCTCATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGAGACCGTCCCAGAAAGAAGGTTaGCCACCGTCTTCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: ELITMWYVIFKGRWFMRPSQKEG*PPSSQW
Trigger: CCACTGGGAAGACGGTGGCCAACCTTCTTTCTGGGA...CGGTCTCATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp ACTGATGAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGTGCAGTCATGGCTGCTaGTGCCTCCTCACTGTCCGC +
Preference number: 4 (lower is better)
Translates to: TDELITMWYVIFKGRWFMCSHGC*CLLTVR
Trigger: GCGGACAGTGAGGAGGCACCAGCAGCCATGACTGCA...CATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTCATCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GTGAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTCTTTGGGCAGGCCTTaGTCTGAGGAATTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: VSTLLLEVCKQHLTLLMNSLGRP*SEEFSE
Trigger: CTCTGAAAATTCCTCAGACCAAGGCCTGCCCAAAGA...ATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATGTGATACCCAAGGGCTTCACCTaGGCTGCATTCATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VQTASDLTDELITMWYVIPKGFT*AAFMAA
Trigger: GGCAGCCATGAATGCAGCTCAGGTGAAGCCCTTGGG...TATCACATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGAGACCGTGCTTCCTCACTGTCTaGTTCCTCCTCACTGCTCTC +
Preference number: 4 (lower is better)
Translates to: ELITMWYVIFKGRWFMRPCFLTV*FLLTAL
Trigger: GAGAGCAGTGAGGAGGAATCAGACAGTGAGGAAGCA...CGGTCTCATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp ACTGATGAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGTATGCCACAGGTGCTTaGGAGAGGGTCCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: TDELITMWYVIFKGRWFMYATGA*ERVLGR
Trigger: TCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATA...CATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTCATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGAGACCGAGCTGCATTCATGGCTaGCAGTGCCTCTCTGTCACT +
Preference number: 4 (lower is better)
Translates to: ELITMWYVIFKGRWFMRPSCIHG*QCLSVT
Trigger: AGTGACAGAGAGGCACTGGCAGCCATGAATGCAGCT...CGGTCTCATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GTTGTTCTTTACTTTTGTAATCTGTGCCATTGGAAAGTGAGAGGCAGTGAGCACGCACCTCTCCATCACTaGTGTCTGATGACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: VVLYFCNLCHWKVRGSEHAPLHH*CLMTPH
Trigger: GTGAGGAGTCATCAGACAGCAGTGATGGAGAGGTGC...GTGCTCACTGCCTCTCACTTTCCAATGGCACAGATTACAAAAGTAAAGAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GTTGTTCTTTACTTTTGTAATCTGTGCCATTGGAAAGTGAGAGGCAGTGAGCACTGTCTGATTCCTCGCTaGTGCTCCCTGAGTCATCCT +
Preference number: 4 (lower is better)
Translates to: VVLYFCNLCHWKVRGSEHCLIPR*CSLSHP
Trigger: AGGATGACTCAGGGAGCAGCAGCGAGGAATCAGACA...GTGCTCACTGCCTCTCACTTTCCAATGGCACAGATTACAAAAGTAAAGAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATGCCAGGAAACACTTCTaGCCGCTCTGCTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: GGVQTASDLTDELITMWYARKHF*PLCSFT
Trigger: AGTGAAGGAGCAGAGCGGCCAGAAGTGTTTCCTGGC...ATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATCCAGCATGGCTGACTTaGGCCTCTGGAGTACAGGAA +
Preference number: 4 (lower is better)
Translates to: GGVQTASDLTDELITMWYPAWLT*ASGVQE
Trigger: TTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGG...ATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GTTGTTCTTTACTTTTGTAATCTGTGCCATTGGAAAGTGAGAGGCAGTGAGCACATTCAAGAAGACTCCTaGTCCTGGGTCAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VVLYFCNLCHWKVRGSEHIQEDS*SWVSGS
Trigger: GCTGCCACTGACCCAGGACCAGGAGTCTTCTTGAAT...GTGCTCACTGCCTCTCACTTTCCAATGGCACAGATTACAAAAGTAAAGAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513538.2
CDS-3UTR TCA 90 bp GTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATGTGATACTCACTACTGCTCTCTaGGTCCTCCTCCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: VQTASDLTDELITMWYVILTTAL*VLLPLP
Trigger: GGGAAGTGGGAGGAGGACTCAGAGAGCAGTAGTGAG...TATCACATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp ACTGATGAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGAATTGTCCCTTTTGCTaGAGGTGCTCTGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: TDELITMWYVIFKGRWFMNCPFC*RCSGGS
Trigger: GCTGCCGCCAGAGCACCTTCAGCAAAAGGGACAATT...CATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTCATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp ACTGATGAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGGACCTCTGCTTGGCTTaGGCAGCTGCAGTGACAACT +
Preference number: 4 (lower is better)
Translates to: TDELITMWYVIFKGRWFMDLCLA*AAAVTT
Trigger: AGTTGTCACTGCAGCTGCTCAAGCCAAGCAGAGGTC...CATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTCATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGTATCTGATTCCTCACTaGTTGAAGAATCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: EHPIAGGVQTASDLTDELYLIPH*LKNPLL
Trigger: CAGCAGAGGATTCTTCAAGCAGTGAGGAATCAGATA...CAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GTTGTTCTTTACTTTTGTAATCTGTGCCATTGGAAAGTGAGAGGCAGTGAGCACGAGCACATGAAGGTATaGCACAGGTGCTTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: VVLYFCNLCHWKVRGSEHEHMKV*HRCLRE
Trigger: CTCTCTCAAGCACCTGTGGCATACCTTCATGTGCTC...GTGCTCACTGCCTCTCACTTTCCAATGGCACAGATTACAAAAGTAAAGAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp ACTGATGAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGGTCTTGGGGTGGCTTTaGCGGTTTCGGCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: TDELITMWYVIFKGRWFMVLGWL*RFRLLL
Trigger: AAGCAGAAGCCGAAACCGCCAAAGCCACCCCAAGAC...CATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTCATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATGTGATATCTCATCACTGGAGCTaGAGGTGTCCTCGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VQTASDLTDELITMWYVISHHWS*RCPRWS
Trigger: GCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGA...TATCACATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATGTGATAGACTGGAGGTGGGTTTaGCCTGGAGGATGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: VQTASDLTDELITMWYVIDWRWV*PGGCSP
Trigger: TGGGGAACATCCTCCAGGCCAAACCCACCTCCAGTC...TATCACATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GTTGTTCTTTACTTTTGTAATCTGTGCCATTGGAAAGTGAGAGGCAGTGAGCACCAGCTGGGTTGGCTTTaGCCTGGGTTTTCTTTACTG +
Preference number: 4 (lower is better)
Translates to: VVLYFCNLCHWKVRGSEHQLGWL*PGFSLL
Trigger: CAGTAAAGAAAACCCAGGCCAAAGCCAACCCAGCTG...GTGCTCACTGCCTCTCACTTTCCAATGGCACAGATTACAAAAGTAAAGAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATGTGATAGTGCAGTGGAGCACATaGAGGTATGCCACAGGTGCT +
Preference number: 4 (lower is better)
Translates to: VQTASDLTDELITMWYVIVQWST*RYATGA
Trigger: AGCACCTGTGGCATACCTTCATGTGCTCCACTGCAC...TATCACATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATCGGGTTTTCTTAGCTTaGAGTGCCGCATCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GGVQTASDLTDELITMWYRVFLA*SAASSS
Trigger: AGAGGAAGATGCGGCACTGCAAGCTAAGAAAACCCG...ATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp ACTGATGAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGTTTCCCCACAGACTTTaGCTGTCCCACGGTTACTGC +
Preference number: 4 (lower is better)
Translates to: TDELITMWYVIFKGRWFMFPHRL*LSHGYC
Trigger: GCAGTAACCGTGGGACAGGCAAAGTCTGTGGGGAAA...CATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTCATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp GTGAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTACTTTTGTAATCTGTaGCATTGGAAAGTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: VSTLLLEVCKQHLTLLMNYFCNL*HWKVRG
Trigger: GCCTCTCACTTTCCAATGGCACAGATTACAAAAGTA...ATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATGTGATATGGCAGGGTGTGGCATaGAATTCCCAGTCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: VQTASDLTDELITMWYVIWQGVA*NSQSCQ
Trigger: CTGGCAAGACTGGGAATTCCATGCCACACCCTGCCA...TATCACATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATGTGATACCCAGTGGCAGGGTGTaGCATGGAATTCCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: VQTASDLTDELITMWYVIPSGRV*HGIPSL
Trigger: AAGACTGGGAATTCCATGCCACACCCTGCCACTGGG...TATCACATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATCAGCTGGGTTGGCTTTaGCCTGGGTTTTCTTTACTG +
Preference number: 4 (lower is better)
Translates to: GGVQTASDLTDELITMWYQLGWL*PGFSLL
Trigger: CAGTAAAGAAAACCCAGGCCAAAGCCAACCCAGCTG...ATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATGGCCGCCTTTCTTGCTaGAGACTCCTTAGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: GGVQTASDLTDELITMWYGRLSC*RLLSRN
Trigger: GTTTCTACTAAGGAGTCTCCAGCAAGAAAGGCGGCC...ATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATGTGATATGTGCCATTGGAAAGTaGGAGGCAGTGAGCACCCTA +
Preference number: 4 (lower is better)
Translates to: VQTASDLTDELITMWYVICAIGK*EAVSTL
Trigger: TAGGGTGCTCACTGCCTCTCACTTTCCAATGGCACA...TATCACATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATGTGATAGGGGTTTCTCACTGGTaGCTTCACCTTGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: VQTASDLTDELITMWYVIGVSHW*LHLGWR
Trigger: TCTCCATCCAAGGTGAAGCCACCAGTGAGAAACCCC...TATCACATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp GTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATGTGATAGTTCACACAGAAGCTTaGACCACACCAGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: VQTASDLTDELITMWYVIVHTEA*TTPAWL
Trigger: CAGCCATGCTGGTGTGGTCCAAGCTTCTGTGTGAAC...TATCACATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
3UTR CAA 72 bp GGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATaGATAACAATGTGGTATGTGATATTCAAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GGVQTASDLTDE*ITMWYVIFKGR
Trigger: CCTCCCCTTGAATATCACATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR TCA 90 bp GTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATGTGATACTCCTCACTACTCTCTaGCTCCTCTTCTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: VQTASDLTDELITMWYVILLTTL*LLFWLL
Trigger: AAGAAGCCAGAAGAGGAGTCAGAGAGTAGTGAGGAG...TATCACATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR GCA 90 bp ACTGATGAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGTGGCTTTTTCTTTCATaGTTGATGGCAAGTCCGCCC +
Preference number: 4 (lower is better)
Translates to: TDELITMWYVIFKGRWFMWLFLS*LMASPP
Trigger: GGGCGGACTTGCCATCAAGCATGAAAGAAAAAGCCA...CATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTCATCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp ACTGATGAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGTCTTTGGGCAGGCCTTaGTCTGAGGAATTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: TDELITMWYVIFKGRWFMSLGRP*SEEFSE
Trigger: CTCTGAAAATTCCTCAGACCAAGGCCTGCCCAAAGA...CATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTCATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CCA 90 bp ACTGATGAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGGGGTTGGCTTTGGCCTaGGTTTTCTTTACTGAGGTT +
Preference number: 4 (lower is better)
Translates to: TDELITMWYVIFKGRWFMGLALA*VFFTEV
Trigger: AACCTCAGTAAAGAAAACCCAGGCCAAAGCCAACCC...CATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTCATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS CCA 90 bp GCAGCAGATGGTGGTAGATCAGGGGAAGTAGCTCCCGCCGCTTCCTaGCCTCGGCCATACCCGCGACCCCCGGCCGGCCGGCTACCTGCA +
Preference number: 5 (lower is better)
Translates to: AADGGRSGEVAPAAS*PRPYPRPPAGRLPA
Trigger: TGCAGGTAGCCGGCCGGCCGGGGGTCGCGGGTATGGCCGAGGCCAGGAAGCGGCGGGAGCTACTTCCCCTGATCTACCACCATCTGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000439160.6
ENST00000445265.6
ENST00000513538.2
ENST00000643257.2
ENST00000646961.1
ENST00000650162.1
CDS GCA 90 bp CTCCGAGGCTCGGGCCTTCCTCGGGGTGCTTGCAGCCTGGGCTTGTaGGGGTGTAGCAGCTGGGCCAGCTGGACTGGGCAGAGGTCACAG +
Preference number: 5 (lower is better)
Translates to: LRGSGLPRGACSLGL*GCSSWASWTGQRSQ
Trigger: CTGTGACCTCTGCCCAGTCCAGCTGGCCCAGCTGCTACACCCGCACAAGCCCAGGCTGCAAGCACCCCGAGGAAGGCCCGAGCCTCGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS GCA 90 bp GGATCACGTCCTCATCCTCGCTCTCGGAGGAGGAGCTCCTGGCTGTaGTCTCCGAGGCTCGGGCCTTCCTCGGGGTGCTTGCAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: GSRPHPRSRRRSSWL*SPRLGPSSGCLQPG
Trigger: CCCAGGCTGCAAGCACCCCGAGGAAGGCCCGAGCCTCGGAGAGCACAGCCAGGAGCTCCTCCTCCGAGAGCGAGGATGAGGACGTGATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000506767.1
ENST00000513346.5
ENST00000514442.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS-3UTR CAA 90 bp AGGGCCACGCCTGCACCTTCTACGCTCCGTGGGCTTGCTTCCCCTGGCTCCCCAATCCGACTGGACTCCTaGCTGCTGCTGGCCCCAGCC +
Preference number: 5 (lower is better)
Translates to: RATPAPSTLRGLASPGSPIRLDS*LLLAPA
Trigger: GGCTGGGGCCAGCAGCAGCAAGGAGTCCAGTCGGAT...TGGGGAGCCAGGGGAAGCAAGCCCACGGAGCGTAGAAGGTGCAGGCGTGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS GCA 90 bp CTCCGAGGCTCGGGCCTTCCTCGGGGTGCTTGCAGCCTGGGCTTGTaGGGGTGTAGCAGCTGGGCCAGCTGGACTACGATTAGGGTCGAC +
Preference number: 5 (lower is better)
Translates to: LRGSGLPRGACSLGL*GCSSWASWTTIRVD
Trigger: GTCGACCCTAATCGTAGTCCAGCTGGCCCAGCTGCTACACCCGCACAAGCCCAGGCTGCAAGCACCCCGAGGAAGGCCCGAGCCTCGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000514442.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CCA 90 bp GGGCTCTATGAGGGGACGGAGGCAGCCTGGCTGTGGTCTGCTGGCTaGGCCACACGTGGTGCCTTGCAGACAGGACCTTGCCCAAGGCCT +
Preference number: 5 (lower is better)
Translates to: GLYEGTEAAWLWSAG*ATRGALQTGPCPRP
Trigger: AGGCCTTGGGCAAGGTCCTGTCTGCAAGGCACCACGTGTGGCCCAGCCAGCAGACCACAGCCAGGCTGCCTCCGTCCCCTCATAGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS GCA 90 bp GAGCCAGCGTCTCCGCCTCCTCCTCACTGTCTGACTCCTCCTCACTaGTCCCTGAGTCCTCCTCTGGCCCTGTCTGGGCCTGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: EPASPPPPHCLTPPH*SLSPPLALSGPELL
Trigger: CAGCAGCTCAGGCCCAGACAGGGCCAGAGGAGGACTCAGGGAGCAGTGAGGAGGAGTCAGACAGTGAGGAGGAGGCGGAGACGCTGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000394269.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000506063.1
ENST00000506767.1
ENST00000513346.5
ENST00000513538.2
ENST00000514442.5
ENST00000515035.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS GCA 90 bp GAGGAGAGACTGGGATGGCGCCACCACATCATCCTCGCTGGACTCTaGTGCGGTCTCCTCCACCAGGGTCTCTGTCCTGGAGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: EERLGWRHHIILAGL*CGLLHQGLCPGGGG
Trigger: CCCACCCCCTCCAGGACAGAGACCCTGGTGGAGGAGACCGCAGCAGAGTCCAGCGAGGATGATGTGGTGGCGCCATCCCAGTCTCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CCA 90 bp TCGCCTCCACGTCTGTCTCATCACTGGAGCTGGAGGTGTCCTCGCTaGAGCTGTCGGCCTGGCCCGCTGACACCATCCCAGGCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: SPPRLSHHWSWRCPR*SCRPGPLTPSQAWQ
Trigger: CTGCCAAGCCTGGGATGGTGTCAGCGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGACAGACGTGGAGGCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646961.1
CDS-3UTR CAA 90 bp CTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGCCTGGGCTGAGGGGGTaGCAGGCCCCACCTTCCCGG +
Preference number: 5 (lower is better)
Translates to: LTWASGVQEDKVGLVPPLPGLRG*QAPPSR
Trigger: CCGGGAAGGTGGGGCCTGCAACCCCCTCAGCCCAGG...CAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp GTCTGTCTCATCACTGGAGCTGGAGGTGTCCTCGCTGGAGCTGTCGGCCTGGCCGGCAGGGCCCCTCCTTaGACCTGGGGTGTCACATCC +
Preference number: 5 (lower is better)
Translates to: VCLITGAGGVLAGAVGLAGRAPP*TWGVTS
Trigger: GGATGTGACACCCCAGGTCAAAGGAGGGGCCCTGCC...GGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGACAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS GCA 90 bp TGCAGTTACCTGGGATGGCGCCACCACATCATCCTCGCTGGACTCTaGTGCGGTCTCCTCCACCAGGGTCTCTGTCCTGGAGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: CSYLGWRHHIILAGL*CGLLHQGLCPGGGG
Trigger: CCCACCCCCTCCAGGACAGAGACCCTGGTGGAGGAGACCGCAGCAGAGTCCAGCGAGGATGATGTGGTGGCGCCATCCCAGGTAACTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506630.1
ENST00000514442.5
CDS-3UTR CAA 90 bp CATGAAGGTATGCCACAGGTGCTTGAGAGAGGGTCCTGGGCAGAGCTCATGGGACCTGGGCTGAGGGGGTaGCAGGCCCCACCTTCCCGG +
Preference number: 5 (lower is better)
Translates to: HEGMPQVLERGSWAELMGPGLRG*QAPPSR
Trigger: CCGGGAAGGTGGGGCCTGCAACCCCCTCAGCCCAGG...TCCCATGAGCTCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATACCTTCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS TCA 90 bp GCACTGTCAACCCCACTTGAAGGCTGGGTCCTGGCAACAGGAGGCTaGGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGGGCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: ALSTPLEGWVLATGG*ASLAFWARTFRAAW
Trigger: CCAGGCTGCCCTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCTGTTGCCAGGACCCAGCCTTCAAGTGGGGTTGACAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000445265.6
ENST00000504761.6
ENST00000643257.2
ENST00000674413.1
CDS CCA 90 bp TTACCTCCACGTCTGTCTCATCACTGGAGCTGGAGGTGTCCTCGCTaGAGCTGTCGGCCTGGCCCGCTGACACCATCCCAGGCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: LPPRLSHHWSWRCPR*SCRPGPLTPSQAWQ
Trigger: CTGCCAAGCCTGGGATGGTGTCAGCGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGACAGACGTGGAGGTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323668.11
ENST00000445265.6
ENST00000650162.1
CDS CCA 90 bp TTCACCACTGAGGCCTGCACCTGGGCCTCATTCAGGGGCCAGGGTTaGCCCAGGAGGCACTGGGTGATGTTGCTTTGCAGCGCCAGGGTT +
Preference number: 5 (lower is better)
Translates to: FTTEACTWASFRGQG*PRRHWVMLLCSARV
Trigger: AACCCTGGCGCTGCAAAGCAACATCACCCAGTGCCTCCTGGGCCAACCCTGGCCCCTGAATGAGGCCCAGGTGCAGGCCTCAGTGGTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CCA 90 bp CCTCCGTGTTCCTCTCTGGGGGTGCTGGGGCCAGGGTCTTGCTTCTaGCAGGTTTGGAGTTACTGTCCTGGGCAGAGGTCACAGCTGCCG +
Preference number: 5 (lower is better)
Translates to: PPCSSLGVLGPGSCF*QVWSYCPGQRSQLP
Trigger: CGGCAGCTGTGACCTCTGCCCAGGACAGTAACTCCAAACCTGCCAGAAGCAAGACCCTGGCCCCAGCACCCCCAGAGAGGAACACGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513538.2
CDS-3UTR CAA 90 bp GCCACTGAGGCCGAGGGAGGCAAACCAAGTGCAGAGGTCATGGGGCAGATGAGTGCTTGCAGCCTGGGCTaGTGCGGGTGTAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: ATEAEGGKPSAEVMGQMSACSLG*CGCSSW
Trigger: CCAGCTGCTACACCCGCACAAGCCCAGGCTGCAAGC...ACTCATCTGCCCCATGACCTCTGCACTTGGTTTGCCTCCCTCGGCCTCAGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR CAA 90 bp GCAGGGCCACGCCTGCACCTTCTACGCTCCGTGGGCTTGCTTCCCCTGGCTCCCGGTCCCTCCTGTTTCTaGCCATCTGATATCCGACTG +
Preference number: 5 (lower is better)
Translates to: AGPRLHLLRSVGLLPLAPGPSCF*PSDIRL
Trigger: CAGTCGGATATCAGATGGCAAGAAACAGGAGGGACC...GGGAGCCAGGGGAAGCAAGCCCACGGAGCGTAGAAGGTGCAGGCGTGGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS TCA 90 bp TTGGCCCAGGAGGCACTGGGTGATGTTGCTTTGCAGCGCCAGGGTTaGGGCTTGGGGGTTCCCAGCCCCTTTCTTGGGCTTCCGGGACTT +
Preference number: 5 (lower is better)
Translates to: LAQEALGDVALQRQG*GLGVPSPFLGLPGL
Trigger: AAGTCCCGGAAGCCCAAGAAAGGGGCTGGGAACCCCCAAGCCTCAACCCTGGCGCTGCAAAGCAACATCACCCAGTGCCTCCTGGGCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS GCA 90 bp TTGGAGAGGCTCTGGGGGCAGACAGGACCATGTTGGGAGGACTGTTaGTACAGGAGGGCAAGAAGGGGCCCACTGCCCTGTCCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: LERLWGQTGPCWEDC*YRRARRGPLPCPSV
Trigger: CACAGAGGGACAGGGCAGTGGGCCCCTTCTTGCCCTCCTGTAGCAACAGTCCTCCCAACATGGTCCTGTCTGCCCCCAGAGCCTCTCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS GCA 90 bp TTCAAGAAGACTCCTGGTCCTGGGTCAGTGGCAGCTCTTCCTCACTaGTCTCCGAGGACCCCTCCGTGTTCCTCTCTGGGGGTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: FKKTPGPGSVAALPH*SPRTPPCSSLGVLG
Trigger: CCCCAGCACCCCCAGAGAGGAACACGGAGGGGTCCTCGGAGAGCAGTGAGGAAGAGCTGCCACTGACCCAGGACCAGGAGTCTTCTTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513538.2
CDS CCA 90 bp AACCTGAGAGGAGAGACTGGGATGGCGCCACCACATCATCCTCGCTaGACTCTGCTGCGGTCTCCTCCACCAGGGTCTCTGTCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: NLRGETGMAPPHHPR*TLLRSPPPGSLSWR
Trigger: CCTCCAGGACAGAGACCCTGGTGGAGGAGACCGCAGCAGAGTCCAGCGAGGATGATGTGGTGGCGCCATCCCAGTCTCTCCTCTCAGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CCA 90 bp TCTCCCTTGCAGTTACCTGGGATGGCGCCACCACATCATCCTCGCTaGACTCTGCTGCGGTCTCCTCCACCAGGGTCTCTGTCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: SPLQLPGMAPPHHPR*TLLRSPPPGSLSWR
Trigger: CCTCCAGGACAGAGACCCTGGTGGAGGAGACCGCAGCAGAGTCCAGCGAGGATGATGTGGTGGCGCCATCCCAGGTAACTGCAAGGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506630.1
ENST00000514442.5
CDS CCA 90 bp TTTTTCCTGAGGCCTTCGCCTCCACGTCTGTCTCATCACTGGAGCTaGAGGTGTCCTCGCTGGAGCTGTCGGCCTGGCCCGCTGACACCA +
Preference number: 5 (lower is better)
Translates to: FFLRPSPPRLSHHWS*RCPRWSCRPGPLTP
Trigger: TGGTGTCAGCGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGACAGACGTGGAGGCGAAGGCCTCAGGAAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646961.1
CDS-3UTR CAA 90 bp TCCGCCCCCAGGACTGAGGAGTTGGTAGATGCTAGTCTTGGGGCTAGTATGATCGGCTTCTTGGCCCTCTaGGCTGGGGGCAGGGCCCCT +
Preference number: 5 (lower is better)
Translates to: SAPRTEELVDASLGASMIGFLAL*AGGRAP
Trigger: AGGGGCCCTGCCCCCAGCCAAGAGGGCCAAGAAGCC...GATCATACTAGCCCCAAGACTAGCATCTACCAACTCCTCAGTCCTGGGGGCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR CAA 90 bp GGGGGCTATTCTTGGGTGGGCAGTGGGCATGGTCACCACATTGGTTCTGATGCCCTACGCTCCGTGGGCTaGCTTCCCCTGGCTCCCCAA +
Preference number: 5 (lower is better)
Translates to: GGYSWVGSGHGHHIGSDALRSVG*LPLAPQ
Trigger: TTGGGGAGCCAGGGGAAGCAAGCCCACGGAGCGTAG...GGCATCAGAACCAATGTGGTGACCATGCCCACTGCCCACCCAAGAATAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS TCA 90 bp TTTGAGGCAGGGCACAGGCCATGCAGGGCGGCTTCCAGCCTCACCTaGGCTGCATTCATGGCTGCCAGTGCCTCTCTGTCACTGTCTGAC +
Preference number: 5 (lower is better)
Translates to: FEAGHRPCRAASSLT*AAFMAASASLSLSD
Trigger: GTCAGACAGTGACAGAGAGGCACTGGCAGCCATGAATGCAGCTCAGGTGAGGCTGGAAGCCGCCCTGCATGGCCTGTGCCCTGCCTCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS CCA 90 bp TTTGCAGCGCCAGGGTTGAGGCTTGGGGGTTCCCAGCCCCTTTCTTaGGCTTCCGGGACTTCTGAGGTGTGGTGCCTGAAGCAGCCTCTT +
Preference number: 5 (lower is better)
Translates to: FAAPGLRLGGSQPLS*ASGTSEVWCLKQPL
Trigger: AAGAGGCTGCTTCAGGCACCACACCTCAGAAGTCCCGGAAGCCCAAGAAAGGGGCTGGGAACCCCCAAGCCTCAACCCTGGCGCTGCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CCA 90 bp ACTCTGCTGCGGTCTCCTCCACCAGGGTCTCTGTCCTGGAGGGGGTaGGACCTACTGGAGAAGCACAGTATCCTGTTGGTAGCCCCAGGT +
Preference number: 5 (lower is better)
Translates to: TLLRSPPPGSLSWRG*DLLEKHSILLVAPG
Trigger: ACCTGGGGCTACCAACAGGATACTGTGCTTCTCCAGTAGGTCCCACCCCCTCCAGGACAGAGACCCTGGTGGAGGAGACCGCAGCAGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CCA 90 bp AGCAGCCTGGGGCCTCTAGGATCACCCTGCCCTATCAGTGCAGAGTaGGTGGACAACAAGGCACAGAGCAGCACTTCAGCCCTTGGCGTG +
Preference number: 5 (lower is better)
Translates to: SSLGPLGSPCPISAE*VDNKAQSSTSALGV
Trigger: CACGCCAAGGGCTGAAGTGCTGCTCTGTGCCTTGTTGTCCACCCACTCTGCACTGATAGGGCAGGGTGATCCTAGAGGCCCCAGGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CCA 90 bp ACAAGGTCTCACTTGGAGAGGCTCTGGGGGCAGACAGGACCATGTTaGGAGGACTGTTGCTACAGGAGGGCAAGAAGGGGCCCACTGCCC +
Preference number: 5 (lower is better)
Translates to: TRSHLERLWGQTGPC*EDCCYRRARRGPLP
Trigger: GGGCAGTGGGCCCCTTCTTGCCCTCCTGTAGCAACAGTCCTCCCAACATGGTCCTGTCTGCCCCCAGAGCCTCTCCAAGTGAGACCTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CCA 90 bp CCTCCGTGTTCCTCTCTGGGGGTGCTGGGGCCAGGGTCTTGCTTCTaGCAGGTTTGGAGTTACTGTCCTTCTGGGCAGAGGTCACAGCTG +
Preference number: 5 (lower is better)
Translates to: PPCSSLGVLGPGSCF*QVWSYCPSGQRSQL
Trigger: CAGCTGTGACCTCTGCCCAGAAGGACAGTAACTCCAAACCTGCCAGAAGCAAGACCCTGGCCCCAGCACCCCCAGAGAGGAACACGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000513346.5
ENST00000674413.1
CDS CCA 90 bp CACCACGCCCAGCCCTATACCCCCGTTCTGAGGAGTGAGTGTTGGTaGCTCAGAGGCCTGGCAAGTCTTACCTGGGCAGAGGTCACAGCT +
Preference number: 5 (lower is better)
Translates to: HHAQPYTPVLRSECW*LRGLASLTWAEVTA
Trigger: AGCTGTGACCTCTGCCCAGGTAAGACTTGCCAGGCCTCTGAGCCACCAACACTCACTCCTCAGAACGGGGGTATAGGGCTGGGCGTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS CCA 90 bp AGCCACCACGCCCAGCCCTATACCCCCGTTCTGAGGAGTGAGTGTTaGTGGCTCAGAGGCCTGGCAAGTCTTACCTGGGCAGAGGTCACA +
Preference number: 5 (lower is better)
Translates to: SHHAQPYTPVLRSEC*WLRGLASLTWAEVT
Trigger: TGTGACCTCTGCCCAGGTAAGACTTGCCAGGCCTCTGAGCCACCAACACTCACTCCTCAGAACGGGGGTATAGGGCTGGGCGTGGTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS-3UTR CAA 90 bp CTGTCTCATCACTGGAGCTGGAGGTGTCCTCGCTGGAGCTGTCGGCCTGGCCCGACGGGTTTTCTTAGCTaGCAGTGCCGCATCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LSHHWSWRCPRWSCRPGPTGFLS*QCRIFL
Trigger: GAGGAAGATGCGGCACTGCAAGCTAAGAAAACCCGT...CGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR CAA 90 bp CACCACATTGGTTCTGATGCCAGGAGTCAAGCACTGTGTAGCGGGGATCACGTCCCTTCCTCGGGGTGCTaGCAGCCTGGGCTTGTGCGG +
Preference number: 5 (lower is better)
Translates to: HHIGSDARSQALCSGDHVPSSGC*QPGLVR
Trigger: CCGCACAAGCCCAGGCTGCAAGCACCCCGAGGAAGG...GACGTGATCCCCGCTACACAGTGCTTGACTCCTGGCATCAGAACCAATGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR CAA 90 bp GCTGGCCCCAGCCATGCTGGCTTTGGGGGCTATTCTTGGGTGGGCAGTGGGCATGGCATGGTCACCACATaGGTTCTGATGCCAGGAGTC +
Preference number: 5 (lower is better)
Translates to: AGPSHAGFGGYSWVGSGHGMVTT*VLMPGV
Trigger: GACTCCTGGCATCAGAACCAATGTGGTGACCATGCC...ATGCCCACTGCCCACCCAAGAATAGCCCCCAAAGCCAGCATGGCTGGGGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR CAA 90 bp AGGGTAATGCTGTCTGATGGAAGGGCCAGGGTTCACACAGAAGCTTGGACCACAGGCTTCTTGGCCCTCTaGGCTGGGGGCAGGGCCCCT +
Preference number: 5 (lower is better)
Translates to: RVMLSDGRARVHTEAWTTGFLAL*AGGRAP
Trigger: AGGGGCCCTGCCCCCAGCCAAGAGGGCCAAGAAGCC...TGTGGTCCAAGCTTCTGTGTGAACCCTGGCCCTTCCATCAGACAGCATTACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp CTGTCTCATCACTGGAGCTGGAGGTGTCCTCGCTGGAGCTGTCGGCCTGGCCCGCATGGCAAGACTTTGTaGGCTTTGGCGGTTTCGGCT +
Preference number: 5 (lower is better)
Translates to: LSHHWSWRCPRWSCRPGPHGKTL*ALAVSA
Trigger: AGCCGAAACCGCCAAAGCCAACAAAGTCTTGCCATG...CGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS GCA 90 bp CTTGTTGGTCCCTTTGGCCTGGACGGAGGTGCTCTGGGGACTTGTTaGAGGGAGTGTTCCCACAGCACTGTCAACCTGAGTGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LVGPFGLDGGALGTC*RECSHSTVNLSGWS
Trigger: GGACCAGCCACTCAGGTTGACAGTGCTGTGGGAACACTCCCTGCAACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGGACCAACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427724.7
ENST00000439160.6
ENST00000513346.5
ENST00000650162.1
CDS GCA 90 bp CTGAAGAAGCCCATTGTGAAAGAGGCTGCCACCACCCCACCCCACTaGCATAACCCAGCCCGAGTCATGGCCTGCTGTGAGGAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: LKKPIVKEAATTPPH*HNPARVMACCEESS
Trigger: GCTGCTTTCCTCACAGCAGGCCATGACTCGGGCTGGGTTATGGCAGTGGGGTGGGGTGGTGGCAGCCTCTTTCACAATGGGCTTCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS-3UTR CAA 90 bp CATGAAGGTATGCCACAGGTGCTTGAGAGAGGGTCCTGGGCAGAGCTCATGGGATCTGGCTTCCCTGCCTaGGTCTGGGAGGCTACAGCC +
Preference number: 5 (lower is better)
Translates to: HEGMPQVLERGSWAELMGSGFPA*VWEATA
Trigger: GGCTGTAGCCTCCCAGACCAAGGCAGGGAAGCCAGA...TCCCATGAGCTCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATACCTTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp CTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGCGCACAGGGGCGACCTaGGCAGATGCAGTGGTATTG +
Preference number: 5 (lower is better)
Translates to: LTWASGVQEDKVGLVPPLRTGAT*ADAVVL
Trigger: CAATACCACTGCATCTGCCAAGGTCGCCCCTGTGCG...CAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp CACAGAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGATGCCCCAAGGACCCCTaGACAGGCACTGAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: HRSLDHTSMADLGLWSTGCPKDP*TGTEAA
Trigger: AGCAGCCTCAGTGCCTGTCAAGGGGTCCTTGGGGCA...TCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp GGGGGCTATTCTTGGGTGGGCAGTGGGCATGGTCACCACATTGGTTCTGATGCCCTTTGGGGGCTATTCTaGGGTGGGCAGTGGGCATGG +
Preference number: 5 (lower is better)
Translates to: GGYSWVGSGHGHHIGSDALWGLF*GGQWAW
Trigger: CCATGCCCACTGCCCACCCAAGAATAGCCCCCAAAG...GGCATCAGAACCAATGTGGTGACCATGCCCACTGCCCACCCAAGAATAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR CAA 90 bp GACTGTGGCTTAAGCTCTGGGTGCAGTGGAGCACATGAAGGTATGCCACAGGTGGGCAGGGCCCCTCCTTaGACCTGGGGTGTCACATCC +
Preference number: 5 (lower is better)
Translates to: DCGLSSGCSGAHEGMPQVGRAPP*TWGVTS
Trigger: GGATGTGACACCCCAGGTCAAAGGAGGGGCCCTGCC...CACCTGTGGCATACCTTCATGTGCTCCACTGCACCCAGAGCTTAAGCCACAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp GGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTACCAGCATGGCTGACTaGGGCCTCTGGAGTACAGGA +
Preference number: 5 (lower is better)
Translates to: GPLEYRKIRWAWSHPWRCTSMAD*GLWSTG
Trigger: TCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGT...ACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS TCA 90 bp GCCCAGGCTCAGCCACAGGTGCAGAATGAGTCTGAGATATGGAGCTaGGGCCAGAGCTATGGCTCCACCAGGCCACACAACACCCTCTTC +
Preference number: 5 (lower is better)
Translates to: AQAQPQVQNESEIWS*GQSYGSTRPHNTLF
Trigger: GAAGAGGGTGTTGTGTGGCCTGGTGGAGCCATAGCTCTGGCCTCAGCTCCATATCTCAGACTCATTCTGCACCTGTGGCTGAGCCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS TCA 90 bp GGGAAGCCCTGGAGCTGTCCCAAGTGTGCCCAGCTGGTACATATTTaGCCCTTAGCTCCAGTAGGGTCAGGGAGTGTGGATGCCCCAGGT +
Preference number: 5 (lower is better)
Translates to: GKPWSCPKCAQLVHI*PLAPVGSGSVDAPG
Trigger: ACCTGGGGCATCCACACTCCCTGACCCTACTGGAGCTAAGGGTCAAATATGTACCAGCTGGGCACACTTGGGACAGCTCCAGGGCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CCA 90 bp ACAGATGGCACAGATGCTGGGCCCCTCGCCAAGACGGTACTGTTCTaGGGGTTTCTCACTGGTGGCTTCACCTTGGATGGAGACCTCTGC +
Preference number: 5 (lower is better)
Translates to: TDGTDAGPLAKTVLF*GFLTGGFTLDGDLC
Trigger: GCAGAGGTCTCCATCCAAGGTGAAGCCACCAGTGAGAAACCCCCAGAACAGTACCGTCTTGGCGAGGGGCCCAGCATCTGTGCCATCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000394269.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000506063.1
ENST00000513346.5
ENST00000513538.2
ENST00000514442.5
ENST00000515035.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS-3UTR CAA 90 bp GGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTCCCAGGACTGAGGAGTaGGTAGATGCTAGTCTTGGG +
Preference number: 5 (lower is better)
Translates to: GPLEYRKIRWAWSHPWRCPRTEE*VDASLG
Trigger: CCCAAGACTAGCATCTACCAACTCCTCAGTCCTGGG...ACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp TACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTAGCCTGAGCAGGATGGGCTTTTCAGCCTaGACCTGGACGGCTACAGGC +
Preference number: 5 (lower is better)
Translates to: YRKIRWAWSHPWRCSLSRMGFSA*TWTATG
Trigger: GCCTGTAGCCGTCCAGGTCAAGGCTGAAAAGCCCAT...CCTGCTCAGGCTACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp CTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGTCGCTGCTCTCCGAGTaGTCCATGGGCTTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: LTWASGVQEDKVGLVPPLSLLSE*SMGFSA
Trigger: GGCTGAAAAGCCCATGGACAACTCGGAGAGCAGCGA...CAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp GGTCCTGGCAACAGGAGGCTGAGCCTCACTGGCTTTCTGGGCGAGGACCTTCAGAAGCTGGGTTCTTCTTaGACACCTGAGTGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: GPGNRRLSLTGFLGEDLQKLGSS*TPEWLV
Trigger: GACCAGCCACTCAGGTGTCAAAGAAGAACCCAGCTT...CTGAAGGTCCTCGCCCAGAAAGCCAGTGAGGCTCAGCCTCCTGTTGCCAGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR CAA 90 bp CATGAAGGTATGCCACAGGTGCTTGAGAGAGGGTCCTGGGCAGAGCTCATGGGAGTATGCCACAGGTGCTaGAGAGAGGGTCCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: HEGMPQVLERGSWAELMGVCHRC*REGPGQ
Trigger: CTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATAC...TCCCATGAGCTCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATACCTTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp CTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGGCTCTGGTCTGGAGGTaGCAGAACTCCAGGATCTGT +
Preference number: 5 (lower is better)
Translates to: LGPLEYRKIRWAWSHPWRALVWR*QNSRIC
Trigger: ACAGATCCTGGAGTTCTGCAACCTCCAGACCAGAGC...CCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS TCA 90 bp AGCACTGTCAACCTGAGTGGCTGGTCCCTCCTGTTTCTTGCCATCTaGTATCCGACTGGACTCCTTGCTGCTGCTGGCCCCAGCCATGCT +
Preference number: 5 (lower is better)
Translates to: STVNLSGWSLLFLAI*YPTGLLAAAGPSHA
Trigger: AGCATGGCTGGGGCCAGCAGCAGCAAGGAGTCCAGTCGGATATCAGATGGCAAGAAACAGGAGGGACCAGCCACTCAGGTTGACAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427724.7
ENST00000439160.6
ENST00000513346.5
ENST00000650162.1
CDS TCA 90 bp AGAGAGCCAACACTTGCTCCACAAGCCAAAAGACGCAGCTTCCTCTaGGGCAAGGGCTATCCTACCAGGTGCATCAGCACCACCCAGGGC +
Preference number: 5 (lower is better)
Translates to: REPTLAPQAKRRSFL*GKGYPTRCISTTQG
Trigger: GCCCTGGGTGGTGCTGATGCACCTGGTAGGATAGCCCTTGCCTCAGAGGAAGCTGCGTCTTTTGGCTTGTGGAGCAAGTGTTGGCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS GCA 90 bp TTCCCACAGCACTGTCAACCTGAGTGGCTGGTCCCTCCTGTTTCTTaGCATCTGATATCCGACTGGACTCCTTGCTGCTGCTGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: FPQHCQPEWLVPPVS*HLISDWTPCCCWPQ
Trigger: CTGGGGCCAGCAGCAGCAAGGAGTCCAGTCGGATATCAGATGGCAAGAAACAGGAGGGACCAGCCACTCAGGTTGACAGTGCTGTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427724.7
ENST00000439160.6
ENST00000513346.5
ENST00000650162.1
CDS GCA 90 bp TGCACCTGGCCCCACCTGCACTTTGATGAGCATCTTCAGGTCCAATaGAAGGCCACAAGGTCTCACTTGGAGAGGCTCTGGGGGCAGACA +
Preference number: 5 (lower is better)
Translates to: CTWPHLHFDEHLQVQ*KATRSHLERLWGQT
Trigger: TGTCTGCCCCCAGAGCCTCTCCAAGTGAGACCTTGTGGCCTTGCATTGGACCTGAAGATGCTCATCAAAGTGCAGGTGGGGCCAGGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS GCA 90 bp ACCCAGAACACCAAGGCTGGGGAAGCCCTGGAGCTGTCCCAAGTGTaGCCAGCTGGTACATATTTGACCCTTAGCTCCAGTAGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: TQNTKAGEALELSQV*PAGTYLTLSSSRVR
Trigger: CCTGACCCTACTGGAGCTAAGGGTCAAATATGTACCAGCTGGGCACACTTGGGACAGCTCCAGGGCTTCCCCAGCCTTGGTGTTCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS GCA 90 bp CAGGATGAGACTTCCTCCATCTCTCCAGGACCTCAGGGGGACCTGTaGCACACTCCAAGCTTCCCTGGGACTCTGACAGGGAGAGTCATT +
Preference number: 5 (lower is better)
Translates to: QDETSSISPGPQGDL*HTPSFPGTLTGRVI
Trigger: AATGACTCTCCCTGTCAGAGTCCCAGGGAAGCTTGGAGTGTGGCACAGGTCCCCCTGAGGTCCTGGAGAGATGGAGGAAGTCTCATCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS CCA 90 bp GGTTTTCTGAGCTTGTTGGTCCCTTTGGCCTGGACGGAGGTGCTCTaGGGACTTGTTGCAGGGAGTGTTCCCACAGCACTGTCAACCCCA +
Preference number: 5 (lower is better)
Translates to: GFLSLLVPLAWTEVL*GLVAGSVPTALSTP
Trigger: TGGGGTTGACAGTGCTGTGGGAACACTCCCTGCAACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGGACCAACAAGCTCAGAAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000445265.6
ENST00000504761.6
ENST00000643257.2
ENST00000674413.1
CDS CCA 90 bp CTTCAGGTCCAATGCAAGGCCACAAGGTCTCACTTGGAGAGGCTCTaGGGGCAGACAGGACCATGTTGGGAGGACTGTTGCTACAGGAGG +
Preference number: 5 (lower is better)
Translates to: LQVQCKATRSHLERL*GQTGPCWEDCCYRR
Trigger: CCTCCTGTAGCAACAGTCCTCCCAACATGGTCCTGTCTGCCCCCAGAGCCTCTCCAAGTGAGACCTTGTGGCCTTGCATTGGACCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS-3UTR CAA 90 bp AGGGTAATGCTGTCTGATGGAAGGGCCAGGGTTCACACAGAAGCTTGGACCACAGACACCATCCCAGGCTaGGCAGCAGCTCCAAAGGCC +
Preference number: 5 (lower is better)
Translates to: RVMLSDGRARVHTEAWTTDTIPG*AAAPKA
Trigger: GGCCTTTGGAGCTGCTGCCAAGCCTGGGATGGTGTC...TGTGGTCCAAGCTTCTGTGTGAACCCTGGCCCTTCCATCAGACAGCATTACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp CACAGAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGATCGCTGCTCTCCGAGTaGTCCATGGGCTTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: HRSLDHTSMADLGLWSTGSLLSE*SMGFSA
Trigger: GGCTGAAAAGCCCATGGACAACTCGGAGAGCAGCGA...TCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp GGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTGCAGATGCAGTGGTATaGGTTTTCTTTGGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: GPLEYRKIRWAWSHPWRCADAVV*VFFGQA
Trigger: GGCCTGCCCAAAGAAAACCAATACCACTGCATCTGC...ACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp CACCACATTGGTTCTGATGCCAGGAGTCAAGCACTGTGTAGCGGGGATCACGTCCCAGCCATGCTGGCTTaGGGGGCTATTCTTGGGTGG +
Preference number: 5 (lower is better)
Translates to: HHIGSDARSQALCSGDHVPAMLA*GAILGW
Trigger: CCACCCAAGAATAGCCCCCAAAGCCAGCATGGCTGG...GACGTGATCCCCGCTACACAGTGCTTGACTCCTGGCATCAGAACCAATGTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS-3UTR CAA 90 bp CACAGAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAACCAGCATGGCTGACTaGGGCCTCTGGAGTACAGGA +
Preference number: 5 (lower is better)
Translates to: HRSLDHTSMADLGLWSTGTSMAD*GLWSTG
Trigger: TCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGT...TCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp CTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGGTTCACACAGAAGCTaGGACCACACCAGCATGGCT +
Preference number: 5 (lower is better)
Translates to: LTWASGVQEDKVGLVPPLGSHRS*DHTSMA
Trigger: AGCCATGCTGGTGTGGTCCAAGCTTCTGTGTGAACC...CAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp CACCACATTGGTTCTGATGCCAGGAGTCAAGCACTGTGTAGCGGGGATCACGTCCCAAGCTCACCCCACTaGAAGGCTGGGTCCTGGCAA +
Preference number: 5 (lower is better)
Translates to: HHIGSDARSQALCSGDHVPSSPH*KAGSWQ
Trigger: TTGCCAGGACCCAGCCTTCAAGTGGGGTGAGCTTGG...GACGTGATCCCCGCTACACAGTGCTTGACTCCTGGCATCAGAACCAATGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS TCA 90 bp TGCTTCTTCCTCCTCTTCCGAGCTCTCCGAGGTGCTGATGGGGTCTaGCACACGGGTTTTCTTAGCTTGCAGTGCCGCATCTTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: CFFLLFRALRGADGV*HTGFLSLQCRIFLC
Trigger: GCAGAGGAAGATGCGGCACTGCAAGCTAAGAAAACCCGTGTGTCAGACCCCATCAGCACCTCGGAGAGCTCGGAAGAGGAGGAAGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000394269.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000513538.2
ENST00000515516.1
ENST00000643257.2
ENST00000643812.1
ENST00000646961.1
ENST00000650162.1
CDS TCA 90 bp TGTTGCAGGGAGTGTTCCCACAGCACTGTCAACAGATTAGGCCACTaGGGCCGAGGGAGGCAAACCAAGTGCAGAGGTCATGGGGCAGAT +
Preference number: 5 (lower is better)
Translates to: CCRECSHSTVNRLGH*GRGRQTKCRGHGAD
Trigger: ATCTGCCCCATGACCTCTGCACTTGGTTTGCCTCCCTCGGCCTCAGTGGCCTAATCTGTTGACAGTGCTGTGGGAACACTCCCTGCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CCA 90 bp GGTGCTTGCAGCCTGGGCTTGTGCGGGTGTAGCAGCTGGGCCAGCTaGACTACGATTAGGGTCGACAAAAATCAGAGGGGGTTTAATCAC +
Preference number: 5 (lower is better)
Translates to: GACSLGLCGCSSWAS*TTIRVDKNQRGFNH
Trigger: GTGATTAAACCCCCTCTGATTTTTGTCGACCCTAATCGTAGTCCAGCTGGCCCAGCTGCTACACCCGCACAAGCCCAGGCTGCAAGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000514442.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CCA 90 bp AAGGTATGCCACAGGTGCTTGAGAGAGGGTCCTGGGCAGAGCTCATaGGATTCAAGAAGACTCCTGGTCCTGGGTCAGTGGCAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: KVCHRCLREGPGQSS*DSRRLLVLGQWQLF
Trigger: GAAGAGCTGCCACTGACCCAGGACCAGGAGTCTTCTTGAATCCCATGAGCTCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513538.2
CDS-3UTR CAA 90 bp CTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTTTTCAGAGCTGGTTTaGCCTGAGCTGCAGTCATGG +
Preference number: 5 (lower is better)
Translates to: LGPLEYRKIRWAWSHPWRFSELV*PELQSW
Trigger: CCATGACTGCAGCTCAGGCAAAACCAGCTCTGAAAA...CCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp GGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGGTCCCACCCTTGGAGGTGTTGGTATTGGTTTTCTTaGGGCAGGCCTTGGTCTGAG +
Preference number: 5 (lower is better)
Translates to: GPLEYRKIRWAWSHPWRCWYWFS*GRPWSE
Trigger: CTCAGACCAAGGCCTGCCCAAAGAAAACCAATACCA...ACACCTCCAAGGGTGGGACCAGGCCCACCTTATCTTCCTGTACTCCAGAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS TCA 90 bp TCTACTGCCTGGGGTCTCCTGCATGTGCTGAGTGTCCTCCAAACGTaGCTGTCAGCCTATTGTCTAAGCTATCCTCTGAGGCCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: STAWGLLHVLSVLQT*LSAYCLSYPLRPKA
Trigger: GGCCTTGGGCCTCAGAGGATAGCTTAGACAATAGGCTGACAGTCACGTTTGGAGGACACTCAGCACATGCAGGAGACCCCAGGCAGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS GCA 90 bp CTGCTGTCCTCACTGTCATCTGAGCTCTCAGGGGCTTTGGTGGCCTaGTGGACCTCAGGAAGCTTAGGTTTTCTGAGCTTGTTGGTCCCT +
Preference number: 5 (lower is better)
Translates to: LLSSLSSELSGALVA*WTSGSLGFLSLLVP
Trigger: AGGGACCAACAAGCTCAGAAAACCTAAGCTTCCTGAGGTCCAGCAGGCCACCAAAGCCCCTGAGAGCTCAGATGACAGTGAGGACAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000506630.1
ENST00000513346.5
ENST00000514442.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CCA 90 bp ACCTCAGGAAGCTTAGGTTTTCTGAGCTTGTTGGTCCCTTTGGCCTaGACGGAGGTGCTCTGGGGACTTGTTGCAGGGAGTGTTCCCACA +
Preference number: 5 (lower is better)
Translates to: TSGSLGFLSLLVPLA*TEVLWGLVAGSVPT
Trigger: TGTGGGAACACTCCCTGCAACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGGACCAACAAGCTCAGAAAACCTAAGCTTCCTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000506630.1
ENST00000513346.5
ENST00000514442.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CCA 90 bp GGTTTTCTGAGCTTGTTGGTCCCTTTGGCCTGGACGGAGGTGCTCTaGGGACTTGTTGCAGGGAGTGTTCCCACAGCACTGTCAACAGAT +
Preference number: 5 (lower is better)
Translates to: GFLSLLVPLAWTEVL*GLVAGSVPTALSTD
Trigger: ATCTGTTGACAGTGCTGTGGGAACACTCCCTGCAACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGGACCAACAAGCTCAGAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CCA 90 bp GACCTTAACTTACCTGTTTTAGGGGACAACATGCCTGCTGCCTGTTaGGGCTTTGCCTCCTGCTTGCCATCTGGGTCATCTTTGGCGGCC +
Preference number: 5 (lower is better)
Translates to: DLNLPVLGDNMPAAC*GFASCLPSGSSLAA
Trigger: GGCCGCCAAAGATGACCCAGATGGCAAGCAGGAGGCAAAGCCCCAACAGGCAGCAGGCATGTTGTCCCCTAAAACAGGTAAGTTAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CCA 90 bp CCCACTTTTCTGCTGCTTATCTGCAAACACCCAGAACACCAAGGCTaGGGAAGCCCTGGAGCTGTCCCAAGTGTGCCCAGCTGGTACATA +
Preference number: 5 (lower is better)
Translates to: PTFLLLICKHPEHQG*GSPGAVPSVPSWYI
Trigger: TATGTACCAGCTGGGCACACTTGGGACAGCTCCAGGGCTTCCCCAGCCTTGGTGTTCTGGGTGTTTGCAGATAAGCAGCAGAAAAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS-3UTR CAA 90 bp ACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCACGGGTTTTCTTAGCTaGCAGTGCCGCATCTTCCTC +
Preference number: 5 (lower is better)
Translates to: TTPAWLTWASGVQEDKVGTGFLS*QCRIFL
Trigger: GAGGAAGATGCGGCACTGCAAGCTAAGAAAACCCGT...GCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp CCCAGGACTGAGGAGTTGGTAGATGCTAGTCTTGGGGCTAGTATGATCTCAAACGACACCATCCCAGGCTaGGCAGCAGCTCCAAAGGCC +
Preference number: 5 (lower is better)
Translates to: PRTEELVDASLGASMISNDTIPG*AAAPKA
Trigger: GGCCTTTGGAGCTGCTGCCAAGCCTGGGATGGTGTC...GTTTGAGATCATACTAGCCCCAAGACTAGCATCTACCAACTCCTCAGTCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR CAA 90 bp CATGAAGGTATGCCACAGGTGCTTGAGAGAGGGTCCTGGGCAGAGCTCATGGGAGCAGATGCAGTGGTATaGGTTTTCTTTGGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: HEGMPQVLERGSWAELMGADAVV*VFFGQA
Trigger: GGCCTGCCCAAAGAAAACCAATACCACTGCATCTGC...TCCCATGAGCTCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATACCTTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp ACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATAAGGTGGGCCTGAAATTGTCCCTTTaGCTGAAGGTGCTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: TTPAWLTWASGVQEDKVGLKLSL*LKVLWR
Trigger: CCGCCAGAGCACCTTCAGCAAAAGGGACAATTTCAG...GCCCACCTTATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp GTGAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATGGCAGGGCCCCTCCTTaGACCTGGGGTGTCACATCC +
Preference number: 5 (lower is better)
Translates to: VSTLLLEVCKQHLTLLMNGRAPP*TWGVTS
Trigger: GGATGTGACACCCCAGGTCAAAGGAGGGGCCCTGCC...ATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS GCA 90 bp TTCCAAGGCTTTACAATGAGTCAGAACAGCCTGGGGCCAGTCTACTaGCTGGGGTCTCCTGCATGTGCTGAGTGTCCTCCAAACGTGACT +
Preference number: 5 (lower is better)
Translates to: FQGFTMSQNSLGPVY*LGSPACAECPPNVT
Trigger: AGTCACGTTTGGAGGACACTCAGCACATGCAGGAGACCCCAGGCAGTAGACTGGCCCCAGGCTGTTCTGACTCATTGTAAAGCCTTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CCA 90 bp CTGTCCTCACTGTCATCTGAGCTCTCAGGGGCTTTGGTGGCCTGCTaGACCTCAGGAAGCTTAGGTTTTCTGAGCTTGTTGGTCCCTTTG +
Preference number: 5 (lower is better)
Translates to: LSSLSSELSGALVAC*TSGSLGFLSLLVPL
Trigger: CAAAGGGACCAACAAGCTCAGAAAACCTAAGCTTCCTGAGGTCCAGCAGGCCACCAAAGCCCCTGAGAGCTCAGATGACAGTGAGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000506630.1
ENST00000513346.5
ENST00000514442.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CCA 90 bp TTGATGAGCATCTTCAGGTCCAATGCAAGGCCACAAGGTCTCACTTaGAGAGGCTCTGGGGGCAGACAGGACCATGTTGGGAGGACTGTT +
Preference number: 5 (lower is better)
Translates to: LMSIFRSNARPQGLT*RGSGGRQDHVGRTV
Trigger: AACAGTCCTCCCAACATGGTCCTGTCTGCCCCCAGAGCCTCTCCAAGTGAGACCTTGTGGCCTTGCATTGGACCTGAAGATGCTCATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS-3UTR CAA 90 bp CCCTCCTCCTCAGTTTCTGAGACCAACGTAGTATTTGCTGAGGGCTCTGCTGACCCCAGGACTGAGGAGTaGGTAGATGCTAGTCTTGGG +
Preference number: 5 (lower is better)
Translates to: PSSSVSETNVVFAEGSADPRTEE*VDASLG
Trigger: CCCAAGACTAGCATCTACCAACTCCTCAGTCCTGGG...GTCAGCAGAGCCCTCAGCAAATACTACGTTGGTCTCAGAAACTGAGGAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR CAA 90 bp GCCCCCAGGACTGAGGAGTTGGTAGATGCTAGTCTTGGGGCTAGTATGATCTCATTCCCAGAAAGAAGGTaGGCCACCGTCTTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: APRTEELVDASLGASMISFPERR*ATVFPV
Trigger: CACTGGGAAGACGGTGGCCAACCTTCTTTCTGGGAA...TGAGATCATACTAGCCCCAAGACTAGCATCTACCAACTCCTCAGTCCTGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR CAA 90 bp GTGAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTCTGGCTTCCCTGCCTaGGTCTGGGAGGCTACAGCC +
Preference number: 5 (lower is better)
Translates to: VSTLLLEVCKQHLTLLMNSGFPA*VWEATA
Trigger: GGCTGTAGCCTCCCAGACCAAGGCAGGGAAGCCAGA...ATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp AGAAGCTTCTGGGAGCTTGGGGCTAGAGGAGGACAAAGGGTAATGCTGTCTGATATGGGCTTTTCAGCCTaGACCTGGACGGCTACAGGC +
Preference number: 5 (lower is better)
Translates to: RSFWELGARGGQRVMLSDMGFSA*TWTATG
Trigger: GCCTGTAGCCGTCCAGGTCAAGGCTGAAAAGCCCAT...ATCAGACAGCATTACCCTTTGTCCTCCTCTAGCCCCAAGCTCCCAGAAGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp CATGAAGGTATGCCACAGGTGCTTGAGAGAGGGTCCTGGGCAGAGCTCATGGGATTTTCAGAGCTGGTTTaGCCTGAGCTGCAGTCATGG +
Preference number: 5 (lower is better)
Translates to: HEGMPQVLERGSWAELMGFSELV*PELQSW
Trigger: CCATGACTGCAGCTCAGGCAAAACCAGCTCTGAAAA...TCCCATGAGCTCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATACCTTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp GTGAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGCCCCAAGGACCCCTaGACAGGCACTGAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: VSTLLLEVCKQHLTLLMNCPKDP*TGTEAA
Trigger: AGCAGCCTCAGTGCCTGTCAAGGGGTCCTTGGGGCA...ATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS TCA 90 bp CATCAGCCAGGTCCACCAGGAGCAAGAGAGAAGAGGATGGTAACATaGAGCTATGTGTCTGCATCCTTGATGGATTCCCAACTCCCCCGC +
Preference number: 5 (lower is better)
Translates to: HQPGPPGAREKRMVT*SYVSASLMDSQLPR
Trigger: GCGGGGGAGTTGGGAATCCATCAAGGATGCAGACACATAGCTTCATGTTACCATCCTCTTCTCTCTTGCTCCTGGTGGACCTGGCTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS-3UTR CAA 90 bp TCCGCCCCCAGGACTGAGGAGTTGGTAGATGCTAGTCTTGGGGCTAGTATGATCCTTTTTCTTTCATGCTaGATGGCAAGTCCGCCCCCA +
Preference number: 5 (lower is better)
Translates to: SAPRTEELVDASLGASMILFLSC*MASPPP
Trigger: TGGGGGCGGACTTGCCATCAAGCATGAAAGAAAAAG...GATCATACTAGCCCCAAGACTAGCATCTACCAACTCCTCAGTCCTGGGGGCGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR CAA 90 bp AGAAGCTTCTGGGAGCTTGGGGCTAGAGGAGGACAAAGGGTAATGCTGTCTGATTTCCCAGAAAGAAGGTaGGCCACCGTCTTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: RSFWELGARGGQRVMLSDFPERR*ATVFPV
Trigger: CACTGGGAAGACGGTGGCCAACCTTCTTTCTGGGAA...ATCAGACAGCATTACCCTTTGTCCTCCTCTAGCCCCAAGCTCCCAGAAGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp GAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGCGCACAGGGGCGACCTaGGCAGATGCAGTGGTATTG +
Preference number: 5 (lower is better)
Translates to: EHPIAGGVQTASDLTDELRTGAT*ADAVVL
Trigger: CAATACCACTGCATCTGCCAAGGTCGCCCCTGTGCG...CAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp GTGAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTACTGGAGCAGTCCCTaGCCCCAAGGACCCCTTGAC +
Preference number: 5 (lower is better)
Translates to: VSTLLLEVCKQHLTLLMNYWSSP*PQGPLD
Trigger: GTCAAGGGGTCCTTGGGGCAAGGGACTGCTCCAGTA...ATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS TCA 90 bp TTTCTCACTGGTGGCTTCACCTTGGATGGAGACCTCTGCTTGGCTTaGGCAGCTGCAGTGACAACTTTTCCAGGGGCTGAAATTGTCCCT +
Preference number: 5 (lower is better)
Translates to: FLTGGFTLDGDLCLA*AAAVTTFPGAEIVP
Trigger: AGGGACAATTTCAGCCCCTGGAAAAGTTGTCACTGCAGCTGCTCAAGCCAAGCAGAGGTCTCCATCCAAGGTGAAGCCACCAGTGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000394269.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000506063.1
ENST00000513346.5
ENST00000513538.2
ENST00000514442.5
ENST00000515035.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS GCA 90 bp CCTGCCCCGCCTCACCACAAGTCTTCCTACTGCTTCAACACTCCTTaGACACTTATCGCTAGTCACAGCATGCTAGGTGCGACATTTGAA +
Preference number: 5 (lower is better)
Translates to: PAPPHHKSSYCFNTP*TLIASHSMLGATFE
Trigger: TTCAAATGTCGCACCTAGCATGCTGTGACTAGCGATAAGTGTGCAAGGAGTGTTGAAGCAGTAGGAAGACTTGTGGTGAGGCGGGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CCA 90 bp GCCTGCATCAGTCATTTCCATCACACACCTGTGCCTTGGCAGTGCTaGAGTTTGTCATCCTACACTTCTGTAGGATGTAGCAAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: ACISHFHHTPVPWQC*SLSSYTSVGCSKPC
Trigger: GCAGGGCTTGCTACATCCTACAGAAGTGTAGGATGACAAACTCCAGCACTGCCAAGGCACAGGTGTGTGATGGAAATGACTGATGCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS CCA 90 bp TCCTGCCAGGCCTGCATCAGTCATTTCCATCACACACCTGTGCCTTaGCAGTGCTGGAGTTTGTCATCCTACACTTCTGTAGGATGTAGC +
Preference number: 5 (lower is better)
Translates to: SCQACISHFHHTPVP*QCWSLSSYTSVGCS
Trigger: GCTACATCCTACAGAAGTGTAGGATGACAAACTCCAGCACTGCCAAGGCACAGGTGTGTGATGGAAATGACTGATGCAGGCCTGGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS-3UTR CAA 90 bp AGAAGCTTCTGGGAGCTTGGGGCTAGAGGAGGACAAAGGGTAATGCTGTCTGATACGGGTTTTCTTAGCTaGCAGTGCCGCATCTTCCTC +
Preference number: 5 (lower is better)
Translates to: RSFWELGARGGQRVMLSDTGFLS*QCRIFL
Trigger: GAGGAAGATGCGGCACTGCAAGCTAAGAAAACCCGT...ATCAGACAGCATTACCCTTTGTCCTCCTCTAGCCCCAAGCTCCCAGAAGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp AGGGTAATGCTGTCTGATGGAAGGGCCAGGGTTCACACAGAAGCTTGGACCACATGGTATTGGTTTTCTTaGGGCAGGCCTTGGTCTGAG +
Preference number: 5 (lower is better)
Translates to: RVMLSDGRARVHTEAWTTWYWFS*GRPWSE
Trigger: CTCAGACCAAGGCCTGCCCAAAGAAAACCAATACCA...TGTGGTCCAAGCTTCTGTGTGAACCCTGGCCCTTCCATCAGACAGCATTACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp CCCTCCTCCTCAGTTTCTGAGACCAACGTAGTATTTGCTGAGGGCTCTGCTGACAAGACTTTGTTGGCTTaGGCGGTTTCGGCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: PSSSVSETNVVFAEGSADKTLLA*AVSASA
Trigger: AGCAGAAGCCGAAACCGCCAAAGCCAACAAAGTCTT...GTCAGCAGAGCCCTCAGCAAATACTACGTTGGTCTCAGAAACTGAGGAGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS TCA 90 bp ATCTCACCTAACAATTCTATTGGTATTGGCTGCCTGGTGCTGGCATaGGGATCTGAGGCTGAGCCCAGACTTGCAGGAATGAGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: ISPNNSIGIGCLVLA*GSEAEPRLAGMSSV
Trigger: CACAGAGCTCATTCCTGCAAGTCTGGGCTCAGCCTCAGATCCTCATGCCAGCACCAGGCAGCCAATACCAATAGAATTGTTAGGTGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS TCA 90 bp GGTGAAGGGACTAAGATCCCACAACTGGTGACACAGGTTGAGCTCTaGATCCAGGTGGGGCAATTACTCACAACCCTATCCTTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: GEGTKIPQLVTQVEL*IQVGQLLTTLSFSD
Trigger: GTCAGAGAAGGATAGGGTTGTGAGTAATTGCCCCACCTGGATTCAGAGCTCAACCTGTGTCACCAGTTGTGGGATCTTAGTCCCTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS-3UTR CAA 90 bp GAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGCCCAGGACTGAGGAGTaGGTAGATGCTAGTCTTGGG +
Preference number: 5 (lower is better)
Translates to: EHPIAGGVQTASDLTDELPRTEE*VDASLG
Trigger: CCCAAGACTAGCATCTACCAACTCCTCAGTCCTGGG...CAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp GAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGAGACCGGACACCATCCCAGGCTaGGCAGCAGCTCCAAAGGCC +
Preference number: 5 (lower is better)
Translates to: ELITMWYVIFKGRWFMRPDTIPG*AAAPKA
Trigger: GGCCTTTGGAGCTGCTGCCAAGCCTGGGATGGTGTC...CGGTCTCATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp GTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATGTGATAGGCTTCTTGGCCCTCTaGGCTGGGGGCAGGGCCCCT +
Preference number: 5 (lower is better)
Translates to: VQTASDLTDELITMWYVIGFLAL*AGGRAP
Trigger: AGGGGCCCTGCCCCCAGCCAAGAGGGCCAAGAAGCC...TATCACATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp GTGAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATGCTCTGGTCTGGAGGTaGCAGAACTCCAGGATCTGT +
Preference number: 5 (lower is better)
Translates to: VSTLLLEVCKQHLTLLMNALVWR*QNSRIC
Trigger: ACAGATCCTGGAGTTCTGCAACCTCCAGACCAGAGC...ATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS TCA 90 bp CCAGAAACATGGCCCTGGAGTTTTTGGGAGCCAGTGAAGGGAGTCTaGTACCAAAAAGCTGAGAGTGGTCAAACAGCAAAGTCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: PETWPWSFWEPVKGV*YQKAESGQTAKSGL
Trigger: GAGACCTGACTTTGCTGTTTGACCACTCTCAGCTTTTTGGTATCAGACTCCCTTCACTGGCTCCCAAAAACTCCAGGGCCATGTTTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS TCA 90 bp GCTCTGAATCCAGGTGGGGCAATTACTCACAACCCTATCCTTCTCTaGCATGTAAGACTGTCCCCTACCAGGCACCTTAAATCCCATAGG +
Preference number: 5 (lower is better)
Translates to: ALNPGGAITHNPILL*HVRLSPTRHLKSHR
Trigger: CCTATGGGATTTAAGGTGCCTGGTAGGGGACAGTCTTACATGTCAGAGAAGGATAGGGTTGTGAGTAATTGCCCCACCTGGATTCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS-3UTR CAA 90 bp GAAGCTTGGACCACACCAGCATGGCTGACTTGGGCCTCTGGAGTACAGGAAGATTTCTCTGTCTCTGCCTaGGCTTTTTCTTTCATGCTT +
Preference number: 5 (lower is better)
Translates to: EAWTTPAWLTWASGVQEDFSVSA*AFSFML
Trigger: AAGCATGAAAGAAAAAGCCAAGGCAGAGACAGAGAA...ATCTTCCTGTACTCCAGAGGCCCAAGTCAGCCATGCTGGTGTGGTCCAAGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS GCA 90 bp GGTACATATTTGACCCTTAGCTCCAGTAGGGTCAGGGAGTGTGGATaGCCCAGGTTAGGTGAATTGAATAATCCAGTCTGCCCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: GTYLTLSSSRVRECG*PRLGELNNPVCPPN
Trigger: ATTTGGAGGGCAGACTGGATTATTCAATTCACCTAACCTGGGGCATCCACACTCCCTGACCCTACTGGAGCTAAGGGTCAAATATGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CCA 90 bp AAACAGGTTTCATCTCACCTAACAATTCTATTGGTATTGGCTGCCTaGTGCTGGCATGAGGATCTGAGGCTGAGCCCAGACTTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: KQVSSHLTILLVLAA*CWHEDLRLSPDLQE
Trigger: TTCCTGCAAGTCTGGGCTCAGCCTCAGATCCTCATGCCAGCACCAGGCAGCCAATACCAATAGAATTGTTAGGTGAGATGAAACCTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS-3UTR CAA 90 bp GAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGAGACCGAGTCTTGGGGTGGCTTaGGCGGTTTCGGCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: ELITMWYVIFKGRWFMRPSLGVA*AVSASA
Trigger: AGCAGAAGCCGAAACCGCCAAAGCCACCCCAAGACT...CGGTCTCATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp GAGCACCCTATTGCTGGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGCTGATTCCTCACTGCTaGAAGAATCCTCTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: EHPIAGGVQTASDLTDELLIPHC*KNPLLV
Trigger: GACCAGCAGAGGATTCTTCAAGCAGTGAGGAATCAG...CAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCCAGCAATAGGGTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS TCA 90 bp TGCCTACAGAGAACAAGAGTGACAGACACATCTGGTATGGCATGGTaGACTAAGAGCACAGGCCACTTGCATCTGAACCCAATCTTACCA +
Preference number: 5 (lower is better)
Translates to: CLQRTRVTDTSGMAW*TKSTGHLHLNPILP
Trigger: TGGTAAGATTGGGTTCAGATGCAAGTGGCCTGTGCTCTTAGTTCACCATGCCATACCAGATGTGTCTGTCACTCTTGTTCTCTGTAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS-3UTR CAA 90 bp GGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATAGTCTTGGGGTGGCTTaGGCGGTTTCGGCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: GGVQTASDLTDELITMWYSLGVA*AVSASA
Trigger: AGCAGAAGCCGAAACCGCCAAAGCCACCCCAAGACT...ATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp GTTTCTGAGACCAACGTAGTATTTGCTGAGGGCTCTGCTGACTTCCTGGGAGACTTCTCTGTCTCTGCCTaGGCTTTTTCTTTCATGCTT +
Preference number: 5 (lower is better)
Translates to: VSETNVVFAEGSADFLGDFSVSA*AFSFML
Trigger: AAGCATGAAAGAAAAAGCCAAGGCAGAGACAGAGAA...GTCTCCCAGGAAGTCAGCAGAGCCCTCAGCAAATACTACGTTGGTCTCAGAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS-3UTR CAA 90 bp GTTGTTCTTTACTTTTGTAATCTGTGCCATTGGAAAGTGAGAGGCAGTGAGCACTTCCCAGAAAGAAGGTaGGCCACCGTCTTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: VVLYFCNLCHWKVRGSEHFPERR*ATVFPV
Trigger: CACTGGGAAGACGGTGGCCAACCTTCTTTCTGGGAA...GTGCTCACTGCCTCTCACTTTCCAATGGCACAGATTACAAAAGTAAAGAACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp GTTGTTCTTTACTTTTGTAATCTGTGCCATTGGAAAGTGAGAGGCAGTGAGCACGGTTCACACAGAAGCTaGGACCACACCAGCATGGCT +
Preference number: 5 (lower is better)
Translates to: VVLYFCNLCHWKVRGSEHGSHRS*DHTSMA
Trigger: AGCCATGCTGGTGTGGTCCAAGCTTCTGTGTGAACC...GTGCTCACTGCCTCTCACTTTCCAATGGCACAGATTACAAAAGTAAAGAACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS GCA 90 bp ATTTTCTACATGTGCCATGCCTTGACACAGACTGGATACATCAACTaGTGTTTTGTATGGTTAAGACACAGAGGTCCAGAGTGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: IFYMCHALTQTGYIN*CFVWLRHRGPEWPG
Trigger: CCCTGGCCACTCTGGACCTCTGTGTCTTAACCATACAAAACAGCAGTTGATGTATCCAGTCTGTGTCAAGGCATGGCACATGTAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS-3UTR CAA 90 bp GGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATCTTTCCCCACAGACTTaGCCTGTCCCACGGTTACTG +
Preference number: 5 (lower is better)
Translates to: GGVQTASDLTDELITMWYLSPQT*PVPRLL
Trigger: CAGTAACCGTGGGACAGGCAAAGTCTGTGGGGAAAG...ATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp GTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATGTGATATACTGGAGCAGTCCCTaGCCCCAAGGACCCCTTGAC +
Preference number: 5 (lower is better)
Translates to: VQTASDLTDELITMWYVIYWSSP*PQGPLD
Trigger: GTCAAGGGGTCCTTGGGGCAAGGGACTGCTCCAGTA...TATCACATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS TCA 90 bp CTGGAGTTTTTGGGAGCCAGTGAAGGGAGTCTGATACCAAAAAGCTaGGAGTGGTCAAACAGCAAAGTCAGGTCTCTGAAATCATTTGGA +
Preference number: 5 (lower is better)
Translates to: LEFLGASEGSLIPKS*EWSNSKVRSLKSFG
Trigger: TCCAAATGATTTCAGAGACCTGACTTTGCTGTTTGACCACTCTCAGCTTTTTGGTATCAGACTCCCTTCACTGGCTCCCAAAAACTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CCA 90 bp GGTGTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTaGTATGTGATATTCAAGGGGAGGTGGTTCATGAGACCGCTCTGG +
Preference number: 5 (lower is better)
Translates to: GVQTASDLTDELITM*YVIFKGRWFMRPLW
Trigger: CCAGAGCGGTCTCATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS CCA 90 bp GTGAAAGGAGAAGGAATGGAAGGAAAAATTAGGGCAAGTAAGACCTaGTCCTTCCTGAACACTTCAGTAGGGCCAGGAACTGTGTTAGAT +
Preference number: 5 (lower is better)
Translates to: VKGEGMEGKIRASKT*SFLNTSVGPGTVLD
Trigger: ATCTAACACAGTTCCTGGCCCTACTGAAGTGTTCAGGAAGGACCAGGTCTTACTTGCCCTAATTTTTCCTTCCATTCCTTCTCCTTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506630.1
CDS-3UTR CAA 90 bp GTTGTTCTTTACTTTTGTAATCTGTGCCATTGGAAAGTGAGAGGCAGTGAGCACCTTTTTCTTTCATGCTaGATGGCAAGTCCGCCCCCA +
Preference number: 5 (lower is better)
Translates to: VVLYFCNLCHWKVRGSEHLFLSC*MASPPP
Trigger: TGGGGGCGGACTTGCCATCAAGCATGAAAGAAAAAG...GTGCTCACTGCCTCTCACTTTCCAATGGCACAGATTACAAAAGTAAAGAACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp GAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGAGACCGCTGATTCCTCACTGCTaGAAGAATCCTCTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: ELITMWYVIFKGRWFMRPLIPHC*KNPLLV
Trigger: GACCAGCAGAGGATTCTTCAAGCAGTGAGGAATCAG...CGGTCTCATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp ACTGATGAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGACTGGTGGCTTCACCTaGGATGGAGACCTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: TDELITMWYVIFKGRWFMTGGFT*DGDLCL
Trigger: CAAGCAGAGGTCTCCATCCAAGGTGAAGCCACCAGT...CATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTCATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS GCA 90 bp TGCTGGAGTTTGTCATCCTACACTTCTGTAGGATGTAGCAAGCCCTaGTATCTTCTGCAAGCAGACAGAGGGAATTGTTCAGATTTTCTT +
Preference number: 5 (lower is better)
Translates to: CWSLSSYTSVGCSKP*YLLQADRGNCSDFL
Trigger: AAGAAAATCTGAACAATTCCCTCTGTCTGCTTGCAGAAGATAGCAGGGCTTGCTACATCCTACAGAAGTGTAGGATGACAAACTCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS-3UTR CAA 90 bp GGAGGTGTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATCTTTTTCTTTCATGCTaGATGGCAAGTCCGCCCCCA +
Preference number: 5 (lower is better)
Translates to: GGVQTASDLTDELITMWYLFLSC*MASPPP
Trigger: TGGGGGCGGACTTGCCATCAAGCATGAAAGAAAAAG...ATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCACACCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp GTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATGTGATAACTGGTGGCTTCACCTaGGATGGAGACCTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: VQTASDLTDELITMWYVITGGFT*DGDLCL
Trigger: CAAGCAGAGGTCTCCATCCAAGGTGAAGCCACCAGT...TATCACATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS-3UTR CAA 90 bp GTGCAAACAGCATCTGACCTTACTGATGAATTGATAACAATGTGGTATGTGATACTGAAATTGTCCCTTTaGCTGAAGGTGCTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: VQTASDLTDELITMWYVILKLSL*LKVLWR
Trigger: CCGCCAGAGCACCTTCAGCAAAAGGGACAATTTCAG...TATCACATACCACATTGTTATCAATTCATCAGTAAGGTCAGATGCTGTTTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS GCA 90 bp CAGTCTGCCCTCCAAATACAATGTGACTATTTTCTACATGTGCCATaGCTTGACACAGACTGGATACATCAACTGCTGTTTTGTATGGTT +
Preference number: 5 (lower is better)
Translates to: QSALQIQCDYFLHVP*LDTDWIHQLLFCMV
Trigger: AACCATACAAAACAGCAGTTGATGTATCCAGTCTGTGTCAAGGCATGGCACATGTAGAAAATAGTCACATTGTATTTGGAGGGCAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS-3UTR CAA 90 bp ACTGATGAATTGATAACAATGTGGTATGTGATATTCAAGGGGAGGTGGTTCATGTTCTCTGTCTCTGCCTaGGCTTTTTCTTTCATGCTT +
Preference number: 5 (lower is better)
Translates to: TDELITMWYVIFKGRWFMFSVSA*AFSFML
Trigger: AAGCATGAAAGAAAAAGCCAAGGCAGAGACAGAGAA...CATGAACCACCTCCCCTTGAATATCACATACCACATTGTTATCAATTCATCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS CCA 72 bp GGTGGTAGATCAGGGGAAGTAGCTCCCGCCGCTTCCTaGCCTCGGCCATACCCGCGACCCCCGGCCGGCCGG +
Preference number: 6 (lower is better)
Translates to: GGRSGEVAPAAS*PRPYPRPPAGR
Trigger: CCGGCCGGCCGGGGGTCGCGGGTATGGCCGAGGCCAGGAAGCGGCGGGAGCTACTTCCCCTGATCTACCACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000394269.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000513538.2
ENST00000643257.2
ENST00000646961.1
ENST00000650162.1
CDS CAA 72 bp GGCTCGGGCCTTCCTCGGGGTGCTTGCAGCCTGGGCTaGTGCGGGTGTAGCAGCTGGGCCAGCTGGACTGGG +
Preference number: 6 (lower is better)
Translates to: GSGLPRGACSLG*CGCSSWASWTG
Trigger: CCCAGTCCAGCTGGCCCAGCTGCTACACCCGCACAAGCCCAGGCTGCAAGCACCCCGAGGAAGGCCCGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS CAA 90 bp GCTCTCCGAGGCTCGGGCCTTCCTCGGGGTGCTTGCAGCCTGGGCTaGTGCGGGTGTAGCAGCTGGGCCAGCTGGACTGGGCAGAGGTCA +
Preference number: 6 (lower is better)
Translates to: ALRGSGLPRGACSLG*CGCSSWASWTGQRS
Trigger: TGACCTCTGCCCAGTCCAGCTGGCCCAGCTGCTACACCCGCACAAGCCCAGGCTGCAAGCACCCCGAGGAAGGCCCGAGCCTCGGAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506767.1
CDS CAA 72 bp GGCTCGGGCCTTCCTCGGGGTGCTTGCAGCCTGGGCTaGTGCGGGTGTAGCAGCTGGGCCAGCTGGACTACG +
Preference number: 6 (lower is better)
Translates to: GSGLPRGACSLG*CGCSSWASWTT
Trigger: CGTAGTCCAGCTGGCCCAGCTGCTACACCCGCACAAGCCCAGGCTGCAAGCACCCCGAGGAAGGCCCGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000514442.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CAA 90 bp GCTCTCCGAGGCTCGGGCCTTCCTCGGGGTGCTTGCAGCCTGGGCTaGTGCGGGTGTAGCAGCTGGGCCAGCTGGACTACGATTAGGGTC +
Preference number: 6 (lower is better)
Translates to: ALRGSGLPRGACSLG*CGCSSWASWTTIRV
Trigger: GACCCTAATCGTAGTCCAGCTGGCCCAGCTGCTACACCCGCACAAGCCCAGGCTGCAAGCACCCCGAGGAAGGCCCGAGCCTCGGAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000514442.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CCA 72 bp GGACGGCTACAGGCCCTGCCTTCTGAGGGGGCCCCTTaGCAGGACTGGAGGTGGGTTTGGCCTGGAGGATGT +
Preference number: 6 (lower is better)
Translates to: GRLQALPSEGAP*QDWRWVWPGGC
Trigger: ACATCCTCCAGGCCAAACCCACCTCCAGTCCTGCCAAGGGGCCCCCTCAGAAGGCAGGGCCTGTAGCCGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000394269.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000513538.2
ENST00000514442.5
ENST00000515035.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CCA 72 bp ACTCTGCTGCGGTCTCCTCCACCAGGGTCTCTGTCCTaGAGGGGGTGGGACCCAGCGTGTGGGCTGACTTGG +
Preference number: 6 (lower is better)
Translates to: TLLRSPPPGSLS*RGWDPACGLTW
Trigger: CCAAGTCAGCCCACACGCTGGGTCCCACCCCCTCCAGGACAGAGACCCTGGTGGAGGAGACCGCAGCAGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000504761.6
CDS CCA 72 bp CTGGATACACCCCCACTTCCAGGCTGTCCAGGGCCATaGGAGCCAGACACCTGGGCGTGGGGCCCACCTGTA +
Preference number: 6 (lower is better)
Translates to: LDTPPLPGCPGP*EPDTWAWGPPV
Trigger: TACAGGTGGGCCCCACGCCCAGGTGTCTGGCTCCCATGGCCCTGGACAGCCTGGAAGTGGGGGTGTATCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CCA 72 bp AGGCCTTCGCCTCCACGTCTGTCTCATCACTGGAGCTaGAGGTGTCCTCGCTGGAGCTGTCGGCCTGGCCCG +
Preference number: 6 (lower is better)
Translates to: RPSPPRLSHHWS*RCPRWSCRPGP
Trigger: CGGGCCAGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGACAGACGTGGAGGCGAAGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646961.1
CDS TCA 72 bp CCCAAGGCCTCTGTGAAGAGAGGGGACCCAGACCCCTaGCCTGAGGGATCGGGTAGACAGGAGCCTGGCCTG +
Preference number: 6 (lower is better)
Translates to: PKASVKRGDPDP*PEGSGRQEPGL
Trigger: CAGGCCAGGCTCCTGTCTACCCGATCCCTCAGGTCAGGGGTCTGGGTCCCCTCTCTTCACAGAGGCCTTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CCA 72 bp GGGGTGGGACCCAGCGTGTGGGCTGACTTGGCCCCCTaGGGCCCTTCACCATCTTCCTCACTCCCTGAAGAA +
Preference number: 6 (lower is better)
Translates to: GVGPSVWADLAP*GPSPSSSLPEE
Trigger: TTCTTCAGGGAGTGAGGAAGATGGTGAAGGGCCCCAGGGGGCCAAGTCAGCCCACACGCTGGGTCCCACCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000504761.6
CDS CCA 72 bp ACTCTGCTGCGGTCTCCTCCACCAGGGTCTCTGTCCTaGAGGGGGTGGGACCTACCAGCGTGTGGGCTGACT +
Preference number: 6 (lower is better)
Translates to: TLLRSPPPGSLS*RGWDLPACGLT
Trigger: AGTCAGCCCACACGCTGGTAGGTCCCACCCCCTCCAGGACAGAGACCCTGGTGGAGGAGACCGCAGCAGAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000439160.6
ENST00000445265.6
ENST00000506630.1
ENST00000513346.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS TCA 72 bp TGCTGGTCTCTGGGTGCCCCCAGCCACAGCTGGGGATaGGCCTGCTGGAGAAGTCGCAGTTCCTGCTTTCCG +
Preference number: 6 (lower is better)
Translates to: CWSLGAPSHSWG*ACWRSRSSCFP
Trigger: CGGAAAGCAGGAACTGCGACTTCTCCAGCAGGCTCATCCCCAGCTGTGGCTGGGGGCACCCAGAGACCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000394269.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000513538.2
ENST00000514442.5
ENST00000515035.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS GCA 72 bp TGCTGTAGCCACGGCCTTCCCCACAGATGGCACAGATaGTGGGCCCCTCGCCAAGACGGTACTGTTCTGGGG +
Preference number: 6 (lower is better)
Translates to: CCSHGLPHRWHR*WAPRQDGTVLG
Trigger: CCCCAGAACAGTACCGTCTTGGCGAGGGGCCCAGCATCTGTGCCATCTGTGGGGAAGGCCGTGGCTACAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000394269.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000506063.1
ENST00000513346.5
ENST00000513538.2
ENST00000514442.5
ENST00000515035.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS GCA 72 bp CTGGGATGGCGCCACCACATCATCCTCGCTGGACTCTaGTGCGGTCTCCTCCACCAGGGTCTCTGTCCTGGA +
Preference number: 6 (lower is better)
Translates to: LGWRHHIILAGL*CGLLHQGLCPG
Trigger: TCCAGGACAGAGACCCTGGTGGAGGAGACCGCAGCAGAGTCCAGCGAGGATGATGTGGTGGCGCCATCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000506630.1
ENST00000513346.5
ENST00000514442.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS GCA 72 bp ACTCCTGGTCCTGGGTCAGTGGCAGCTCTTCCTCACTaGTCTCCGAGGACCCCTCCGTGTTCCTCTCTGGGG +
Preference number: 6 (lower is better)
Translates to: TPGPGSVAALPH*SPRTPPCSSLG
Trigger: CCCCAGAGAGGAACACGGAGGGGTCCTCGGAGAGCAGTGAGGAAGAGCTGCCACTGACCCAGGACCAGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513538.2
CDS CCA 72 bp GGAGAGACTGGGATGGCGCCACCACATCATCCTCGCTaGACTCTGCTGCGGTCTCCTCCACCAGGGTCTCTG +
Preference number: 6 (lower is better)
Translates to: GETGMAPPHHPR*TLLRSPPPGSL
Trigger: CAGAGACCCTGGTGGAGGAGACCGCAGCAGAGTCCAGCGAGGATGATGTGGTGGCGCCATCCCAGTCTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CCA 72 bp GCACCCTCACCCAGCGTGTGGGCTGACTTGGCCCCCTaGGGCCCTTCACCATCTTCCTCACTCCCTGAAGAA +
Preference number: 6 (lower is better)
Translates to: APSPSVWADLAP*GPSPSSSLPEE
Trigger: TTCTTCAGGGAGTGAGGAAGATGGTGAAGGGCCCCAGGGGGCCAAGTCAGCCCACACGCTGGGTGAGGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CCA 72 bp CTCCGAGGACCCCTCCGTGTTCCTCTCTGGGGGTGCTaGGGCCAGGGTCTTGCTTCTGGCAGGTTTGGAGTT +
Preference number: 6 (lower is better)
Translates to: LRGPLRVPLWGC*GQGLASGRFGV
Trigger: AACTCCAAACCTGCCAGAAGCAAGACCCTGGCCCCAGCACCCCCAGAGAGGAACACGGAGGGGTCCTCGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000513346.5
ENST00000513538.2
ENST00000674413.1
CDS CAA 90 bp CTTGGAGAGGCTCTGGGGGCAGACAGGACCATGTTGGGAGGACTGTaGCTACAGGAGGGCAAGAAGGGGCCCACTGCCCTGTCCCTCTGT +
Preference number: 6 (lower is better)
Translates to: LGEALGADRTMLGGL*LQEGKKGPTALSLC
Trigger: ACAGAGGGACAGGGCAGTGGGCCCCTTCTTGCCCTCCTGTAGCAACAGTCCTCCCAACATGGTCCTGTCTGCCCCCAGAGCCTCTCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS TCA 72 bp GGCTGCTGGTGCCTCCTCACTGTCCGCACTGTCCGATaGCTCCTCGCTGCTCTCCGAGTTGTCCATGGGCTT +
Preference number: 6 (lower is better)
Translates to: GCWCLLTVRTVR*LLAALRVVHGL
Trigger: AAGCCCATGGACAACTCGGAGAGCAGCGAGGAGTCATCGGACAGTGCGGACAGTGAGGAGGCACCAGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000394269.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000513538.2
ENST00000514442.5
ENST00000515035.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS TCA 72 bp AGGAGCCAAGGCAGCTCTGATCTGGTGGGTCTTCCCTaGAGGCTTCACCTGAGCCAGCGTCTCCGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: RSQGSSDLVGLP*RLHLSQRLRLL
Trigger: GAGGAGGCGGAGACGCTGGCTCAGGTGAAGCCTTCAGGGAAGACCCACCAGATCAGAGCTGCCTTGGCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000394269.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000506063.1
ENST00000506767.1
ENST00000513346.5
ENST00000513538.2
ENST00000514442.5
ENST00000515035.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS TCA 72 bp GGTGCCTTGCAGACAGGACCTTGCCCAAGGCCTCTGTaGAGAGAGGGGACCCAGACCCCTGACCTGAGGGAT +
Preference number: 6 (lower is better)
Translates to: GALQTGPCPRPL*REGTQTPDLRD
Trigger: ATCCCTCAGGTCAGGGGTCTGGGTCCCCTCTCTTCACAGAGGCCTTGGGCAAGGTCCTGTCTGCAAGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS TCA 72 bp GCCTGCCTATGTGAGGCTCCGGGCCAAGGTGCAGGATaGGACTTCCTCCATCTCTCCAGGACCTCAGGGGGA +
Preference number: 6 (lower is better)
Translates to: ACLCEAPGQGAG*DFLHLSRTSGG
Trigger: TCCCCCTGAGGTCCTGGAGAGATGGAGGAAGTCTCATCCTGCACCTTGGCCCGGAGCCTCACATAGGCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS GCA 72 bp CCACCCCACTGCCATAACCCAGCCCGAGTCATGGCCTaGTGTGAGGAAAGCAGCCTGGGGCCTCTAGGATCA +
Preference number: 6 (lower is better)
Translates to: PPHCHNPARVMA*CEESSLGPLGS
Trigger: TGATCCTAGAGGCCCCAGGCTGCTTTCCTCACAGCAGGCCATGACTCGGGCTGGGTTATGGCAGTGGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CCA 72 bp CCAGGGTTGAGGCTTGGGGGTTCCCAGCCCCTTTCTTaGGCTTCCGGGACTTCTGAGGTGTGGTGCCTGAAG +
Preference number: 6 (lower is better)
Translates to: PGLRLGGSQPLS*ASGTSEVWCLK
Trigger: CTTCAGGCACCACACCTCAGAAGTCCCGGAAGCCCAAGAAAGGGGCTGGGAACCCCCAAGCCTCAACCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CCA 72 bp TTCTTCTTCTTGCTCCTGGGGGTCCTGGCAGCTGGCTaGTCTCCCGATAGCTTCCGCTTGCGGCTCTCCCAG +
Preference number: 6 (lower is better)
Translates to: FFFLLLGVLAAG*SPDSFRLRLSQ
Trigger: CTGGGAGAGCCGCAAGCGGAAGCTATCGGGAGACCAGCCAGCTGCCAGGACCCCCAGGAGCAAGAAGAAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CCA 72 bp GTGGGACCTACCAGCGTGTGGGCTGACTTGGCCCCCTaGGGCCCTTCACCATCTTCCTCACTCCCTGAAGAA +
Preference number: 6 (lower is better)
Translates to: VGPTSVWADLAP*GPSPSSSLPEE
Trigger: TTCTTCAGGGAGTGAGGAAGATGGTGAAGGGCCCCAGGGGGCCAAGTCAGCCCACACGCTGGTAGGTCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000439160.6
ENST00000445265.6
ENST00000506630.1
ENST00000513346.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CCA 72 bp CAGTTACCTGGGATGGCGCCACCACATCATCCTCGCTaGACTCTGCTGCGGTCTCCTCCACCAGGGTCTCTG +
Preference number: 6 (lower is better)
Translates to: QLPGMAPPHHPR*TLLRSPPPGSL
Trigger: CAGAGACCCTGGTGGAGGAGACCGCAGCAGAGTCCAGCGAGGATGATGTGGTGGCGCCATCCCAGGTAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506630.1
ENST00000514442.5
CDS CCA 72 bp TGGATGTGGCAAAGGTGGCCACACCCATGCAGGTGCTaGGGTTTAGGCATGGGGCTACTCTCCACCCCTCCC +
Preference number: 6 (lower is better)
Translates to: WMWQRWPHPCRC*GLGMGLLSTPP
Trigger: GGGAGGGGTGGAGAGTAGCCCCATGCCTAAACCCCAGCACCTGCATGGGTGTGGCCACCTTTGCCACATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS CCA 72 bp TTCCTGAGGCCTTCGCCTCCACGTCTGTCTCATCACTaGAGCTGGAGGTGTCCTCGCTGGAGCTGTCGGCCT +
Preference number: 6 (lower is better)
Translates to: FLRPSPPRLSHH*SWRCPRWSCRP
Trigger: AGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGACAGACGTGGAGGCGAAGGCCTCAGGAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646961.1
CDS CAA 72 bp GGGAGTACTGGAGCAGTCCCTTGCCCCAAGGACCCCTaGACAGGCACTGAGGCTGCTTTCACCTGGAGGCCT +
Preference number: 6 (lower is better)
Translates to: GSTGAVPCPKDP*TGTEAAFTWRP
Trigger: AGGCCTCCAGGTGAAAGCAGCCTCAGTGCCTGTCAAGGGGTCCTTGGGGCAAGGGACTGCTCCAGTACTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000394269.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000513538.2
ENST00000514442.5
ENST00000515035.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CAA 90 bp CACAAGGTCTCACTTGGAGAGGCTCTGGGGGCAGACAGGACCATGTaGGGAGGACTGTTGCTACAGGAGGGCAAGAAGGGGCCCACTGCC +
Preference number: 6 (lower is better)
Translates to: HKVSLGEALGADRTM*GGLLLQEGKKGPTA
Trigger: GGCAGTGGGCCCCTTCTTGCCCTCCTGTAGCAACAGTCCTCCCAACATGGTCCTGTCTGCCCCCAGAGCCTCTCCAAGTGAGACCTTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS TCA 72 bp GAGGCACTGGGTGATGTTGCTTTGCAGCGCCAGGGTTaGGGCTTGGGGGTTCCCAGCCCCTTTCTTGGGCTT +
Preference number: 6 (lower is better)
Translates to: EALGDVALQRQG*GLGVPSPFLGL
Trigger: AAGCCCAAGAAAGGGGCTGGGAACCCCCAAGCCTCAACCCTGGCGCTGCAAAGCAACATCACCCAGTGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS TCA 72 bp CCACCACGCCCAGCCCTATACCCCCGTTCTGAGGAGTaGGTGTTGGTGGCTCAGAGGCCTGGCAAGTCTTAC +
Preference number: 6 (lower is better)
Translates to: PPRPALYPRSEE*VLVAQRPGKSY
Trigger: GTAAGACTTGCCAGGCCTCTGAGCCACCAACACTCACTCCTCAGAACGGGGGTATAGGGCTGGGCGTGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS GCA 72 bp CCCTTTGGCCTGGACGGAGGTGCTCTGGGGACTTGTTaGAGGGAGTGTTCCCACAGCACTGTCAACCCCACT +
Preference number: 6 (lower is better)
Translates to: PFGLDGGALGTC*RECSHSTVNPT
Trigger: AGTGGGGTTGACAGTGCTGTGGGAACACTCCCTGCAACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000445265.6
ENST00000504761.6
ENST00000643257.2
ENST00000674413.1
CDS GCA 72 bp CAGCCTGGGGCCTCTAGGATCACCCTGCCCTATCAGTaGAGAGTGGGTGGACAACAAGGCACAGAGCAGCAC +
Preference number: 6 (lower is better)
Translates to: QPGASRITLPYQ*RVGGQQGTEQH
Trigger: GTGCTGCTCTGTGCCTTGTTGTCCACCCACTCTGCACTGATAGGGCAGGGTGATCCTAGAGGCCCCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CCA 72 bp GCCTATGGGCTGCCAGTCCTCTCCCTTGCAGTTACCTaGGATGGCGCCACCACATCATCCTCGCTGGACTCT +
Preference number: 6 (lower is better)
Translates to: AYGLPVLSLAVT*DGATTSSSLDS
Trigger: AGAGTCCAGCGAGGATGATGTGGTGGCGCCATCCCAGGTAACTGCAAGGGAGAGGACTGGCAGCCCATAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506630.1
ENST00000514442.5
CDS CCA 72 bp ACTCTGCTGCGGTCTCCTCCACCAGGGTCTCTGTCCTaGAGGGGGTGGGACCTACTGGAGAAGCACAGTATC +
Preference number: 6 (lower is better)
Translates to: TLLRSPPPGSLS*RGWDLLEKHSI
Trigger: GATACTGTGCTTCTCCAGTAGGTCCCACCCCCTCCAGGACAGAGACCCTGGTGGAGGAGACCGCAGCAGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CCA 72 bp CACTTGGAGAGGCTCTGGGGGCAGACAGGACCATGTTaGGAGGACTGTTGCTACAGGAGGGCAAGAAGGGGC +
Preference number: 6 (lower is better)
Translates to: HLERLWGQTGPC*EDCCYRRARRG
Trigger: GCCCCTTCTTGCCCTCCTGTAGCAACAGTCCTCCCAACATGGTCCTGTCTGCCCCCAGAGCCTCTCCAAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CAA 72 bp TCCCTTTGGCCTGGACGGAGGTGCTCTGGGGACTTGTaGCAGGGAGTGTTCCCACAGCACTGTCAACCCCAC +
Preference number: 6 (lower is better)
Translates to: SLWPGRRCSGDL*QGVFPQHCQPH
Trigger: GTGGGGTTGACAGTGCTGTGGGAACACTCCCTGCAACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000445265.6
ENST00000504761.6
ENST00000643257.2
ENST00000674413.1
CDS CAA 72 bp TGGTCCCTTTGGCCTGGACGGAGGTGCTCTGGGGACTaGTTGCAGGGAGTGTTCCCACAGCACTGTCAACCC +
Preference number: 6 (lower is better)
Translates to: WSLWPGRRCSGD*LQGVFPQHCQP
Trigger: GGGTTGACAGTGCTGTGGGAACACTCCCTGCAACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000445265.6
ENST00000504761.6
ENST00000643257.2
ENST00000674413.1
CDS CAA 90 bp GCTTGTTGGTCCCTTTGGCCTGGACGGAGGTGCTCTGGGGACTTGTaGCAGGGAGTGTTCCCACAGCACTGTCAACCTGAGTGGCTGGTC +
Preference number: 6 (lower is better)
Translates to: ACWSLWPGRRCSGDL*QGVFPQHCQPEWLV
Trigger: GACCAGCCACTCAGGTTGACAGTGCTGTGGGAACACTCCCTGCAACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGGACCAACAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427724.7
ENST00000439160.6
ENST00000513346.5
ENST00000650162.1
CDS CAA 90 bp GGGGAAGCCCTGGAGCTGTCCCAAGTGTGCCCAGCTGGTACATATTaGACCCTTAGCTCCAGTAGGGTCAGGGAGTGTGGATGCCCCAGG +
Preference number: 6 (lower is better)
Translates to: GEALELSQVCPAGTY*TLSSSRVRECGCPR
Trigger: CCTGGGGCATCCACACTCCCTGACCCTACTGGAGCTAAGGGTCAAATATGTACCAGCTGGGCACACTTGGGACAGCTCCAGGGCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS TCA 72 bp AGACAAGCCCTGCCTGAGAAGATGCGCCTGCCTATGTaGGGCTCCGGGCCAAGGTGCAGGATGAGACTTCCT +
Preference number: 6 (lower is better)
Translates to: RQALPEKMRLPM*GSGPRCRMRLP
Trigger: AGGAAGTCTCATCCTGCACCTTGGCCCGGAGCCTCACATAGGCAGGCGCATCTTCTCAGGCAGGGCTTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS GCA 72 bp CCCTTTGGCCTGGACGGAGGTGCTCTGGGGACTTGTTaGAGGGAGTGTTCCCACAGCACTGTCAACCTGAGT +
Preference number: 6 (lower is better)
Translates to: PFGLDGGALGTC*RECSHSTVNLS
Trigger: ACTCAGGTTGACAGTGCTGTGGGAACACTCCCTGCAACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427724.7
ENST00000439160.6
ENST00000513346.5
ENST00000650162.1
CDS GCA 72 bp CCAGGGTCCAGGCTTTGCACTAAGCTAGACAAGCCCTaGCTGAGAAGATGCGCCTGCCTATGTGAGGCTCCG +
Preference number: 6 (lower is better)
Translates to: PGSRLCTKLDKP*LRRCACLCEAP
Trigger: CGGAGCCTCACATAGGCAGGCGCATCTTCTCAGGCAGGGCTTGTCTAGCTTAGTGCAAAGCCTGGACCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS CCA 72 bp AAGGACCCCTTGACAGGCACTGAGGCTGCTTTCACCTaGAGGCCTTTCCCCACAGACTTTGCCTGTCCCACG +
Preference number: 6 (lower is better)
Translates to: KDPLTGTEAAFT*RPFPTDFACPT
Trigger: CGTGGGACAGGCAAAGTCTGTGGGGAAAGGCCTCCAGGTGAAAGCAGCCTCAGTGCCTGTCAAGGGGTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000394269.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000513538.2
ENST00000514442.5
ENST00000515035.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CCA 72 bp AGCTTGTTGGTCCCTTTGGCCTGGACGGAGGTGCTCTaGGGACTTGTTGCAGGGAGTGTTCCCACAGCACTG +
Preference number: 6 (lower is better)
Translates to: SLLVPLAWTEVL*GLVAGSVPTAL
Trigger: CAGTGCTGTGGGAACACTCCCTGCAACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGGACCAACAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000506630.1
ENST00000513346.5
ENST00000514442.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CCA 72 bp CAGCCCTATACCCCCGTTCTGAGGAGTGAGTGTTGGTaGCTCAGAGGCCTGGCAAGTCTTACCTGGGCAGAG +
Preference number: 6 (lower is better)
Translates to: QPYTPVLRSECW*LRGLASLTWAE
Trigger: CTCTGCCCAGGTAAGACTTGCCAGGCCTCTGAGCCACCAACACTCACTCCTCAGAACGGGGGTATAGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS CAA 72 bp TGGGGCTTTGCCTCCTGCTTGCCATCTGGGTCATCTTaGGCGGCCAGAGTAGAGGAAACTGAGGGGCTGGAG +
Preference number: 6 (lower is better)
Translates to: WGFASCLPSGSS*AARVEETEGLE
Trigger: CTCCAGCCCCTCAGTTTCCTCTACTCTGGCCGCCAAAGATGACCCAGATGGCAAGCAGGAGGCAAAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000514442.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CAA 72 bp TCCCTTTGGCCTGGACGGAGGTGCTCTGGGGACTTGTaGCAGGGAGTGTTCCCACAGCACTGTCAACCTGAG +
Preference number: 6 (lower is better)
Translates to: SLWPGRRCSGDL*QGVFPQHCQPE
Trigger: CTCAGGTTGACAGTGCTGTGGGAACACTCCCTGCAACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427724.7
ENST00000439160.6
ENST00000513346.5
ENST00000650162.1
CDS CAA 72 bp TGGTCCCTTTGGCCTGGACGGAGGTGCTCTGGGGACTaGTTGCAGGGAGTGTTCCCACAGCACTGTCAACCT +
Preference number: 6 (lower is better)
Translates to: WSLWPGRRCSGD*LQGVFPQHCQP
Trigger: AGGTTGACAGTGCTGTGGGAACACTCCCTGCAACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000427724.7
ENST00000439160.6
ENST00000506630.1
ENST00000513346.5
ENST00000650162.1
CDS CAA 72 bp TCCACCCTAAGGCCTATGGGCTGCCAGTCCTCTCCCTaGCAGTTACCTGGGATGGCGCCACCACATCATCCT +
Preference number: 6 (lower is better)
Translates to: STLRPMGCQSSP*QLPGMAPPHHP
Trigger: AGGATGATGTGGTGGCGCCATCCCAGGTAACTGCAAGGGAGAGGACTGGCAGCCCATAGGCCTTAGGGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506630.1
ENST00000514442.5
CDS CAA 72 bp TGGTCCCTTTGGCCTGGACGGAGGTGCTCTGGGGACTaGTTGCAGGGAGTGTTCCCACAGCACTGTCAACAG +
Preference number: 6 (lower is better)
Translates to: WSLWPGRRCSGD*LQGVFPQHCQQ
Trigger: CTGTTGACAGTGCTGTGGGAACACTCCCTGCAACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CAA 72 bp TCACTTGGAGAGGCTCTGGGGGCAGACAGGACCATGTaGGGAGGACTGTTGCTACAGGAGGGCAAGAAGGGG +
Preference number: 6 (lower is better)
Translates to: SLGEALGADRTM*GGLLLQEGKKG
Trigger: CCCCTTCTTGCCCTCCTGTAGCAACAGTCCTCCCAACATGGTCCTGTCTGCCCCCAGAGCCTCTCCAAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CAA 90 bp GCTTGTTGGTCCCTTTGGCCTGGACGGAGGTGCTCTGGGGACTTGTaGCAGGGAGTGTTCCCACAGCACTGTCAACCCCACTTGAAGGCT +
Preference number: 6 (lower is better)
Translates to: ACWSLWPGRRCSGDL*QGVFPQHCQPHLKA
Trigger: AGCCTTCAAGTGGGGTTGACAGTGCTGTGGGAACACTCCCTGCAACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGGACCAACAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000445265.6
ENST00000504761.6
ENST00000643257.2
ENST00000674413.1
CDS CAA 90 bp GCTGCCTGTTGGGGCTTTGCCTCCTGCTTGCCATCTGGGTCATCTTaGGCGGCCAGAGTAGAGGAAACTGAGGGGCTGGAGTCTAGCTTG +
Preference number: 6 (lower is better)
Translates to: AACWGFASCLPSGSS*AARVEETEGLESSL
Trigger: CAAGCTAGACTCCAGCCCCTCAGTTTCCTCTACTCTGGCCGCCAAAGATGACCCAGATGGCAAGCAGGAGGCAAAGCCCCAACAGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000514442.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CAA 90 bp GCTTGTTGGTCCCTTTGGCCTGGACGGAGGTGCTCTGGGGACTTGTaGCAGGGAGTGTTCCCACAGCACTGTCAACAGATTAGGCCACTG +
Preference number: 6 (lower is better)
Translates to: ACWSLWPGRRCSGDL*QGVFPQHCQQIRPL
Trigger: CAGTGGCCTAATCTGTTGACAGTGCTGTGGGAACACTCCCTGCAACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGGACCAACAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS TCA 72 bp CTCCTCTTCCGAGCTCTCCGAGGTGCTGATGGGGTCTaGCACACGGGTTTTCTTAGCTTGCAGTGCCGCATC +
Preference number: 6 (lower is better)
Translates to: LLFRALRGADGV*HTGFLSLQCRI
Trigger: GATGCGGCACTGCAAGCTAAGAAAACCCGTGTGTCAGACCCCATCAGCACCTCGGAGAGCTCGGAAGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000394269.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000513538.2
ENST00000515516.1
ENST00000643257.2
ENST00000643812.1
ENST00000646961.1
ENST00000650162.1
CDS TCA 72 bp AACCTGAGTGGCTGGTCCCTCCTGTTTCTTGCCATCTaGTATCCGACTGGACTCCTTGCTGCTGCTGGCCCC +
Preference number: 6 (lower is better)
Translates to: NLSGWSLLFLAI*YPTGLLAAAGP
Trigger: GGGGCCAGCAGCAGCAAGGAGTCCAGTCGGATATCAGATGGCAAGAAACAGGAGGGACCAGCCACTCAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427724.7
ENST00000439160.6
ENST00000513346.5
ENST00000650162.1
CDS GCA 72 bp TTGGGTGCCCACTCGCACAGGGGCGACCTTGGCAGATaGAGTGGTATTGGTTTTCTTTGGGCAGGCCTTGGT +
Preference number: 6 (lower is better)
Translates to: LGAHSHRGDLGR*SGIGFLWAGLG
Trigger: ACCAAGGCCTGCCCAAAGAAAACCAATACCACTGCATCTGCCAAGGTCGCCCCTGTGCGAGTGGGCACCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000394269.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000513538.2
ENST00000514442.5
ENST00000515035.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS GCA 72 bp GACAACATGCCTGCTGCCTGTTGGGGCTTTGCCTCCTaGTTGCCATCTGGGTCATCTTTGGCGGCCAGAGTA +
Preference number: 6 (lower is better)
Translates to: DNMPAACWGFAS*LPSGSSLAARV
Trigger: TACTCTGGCCGCCAAAGATGACCCAGATGGCAAGCAGGAGGCAAAGCCCCAACAGGCAGCAGGCATGTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000514442.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS GCA 72 bp TGTGAGGAAAGCAGCCTGGGGCCTCTAGGATCACCCTaGCCTATCAGTGCAGAGTGGGTGGACAACAAGGCA +
Preference number: 6 (lower is better)
Translates to: CEESSLGPLGSP*PISAEWVDNKA
Trigger: TGCCTTGTTGTCCACCCACTCTGCACTGATAGGGCAGGGTGATCCTAGAGGCCCCAGGCTGCTTTCCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS GCA 72 bp CCGCACCCGGCCGACATCTATCATTCCTGCCAGGCCTaGATCAGTCATTTCCATCACACACCTGTGCCTTGG +
Preference number: 6 (lower is better)
Translates to: PHPADIYHSCQA*ISHFHHTPVPW
Trigger: CCAAGGCACAGGTGTGTGATGGAAATGACTGATGCAGGCCTGGCAGGAATGATAGATGTCGGCCGGGTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS CCA 72 bp TTTCAGAGGCCTTTACCTCCACGTCTGTCTCATCACTaGAGCTGGAGGTGTCCTCGCTGGAGCTGTCGGCCT +
Preference number: 6 (lower is better)
Translates to: FQRPLPPRLSHH*SWRCPRWSCRP
Trigger: AGGCCGACAGCTCCAGCGAGGACACCTCCAGCTCCAGTGATGAGACAGACGTGGAGGTAAAGGCCTCTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323668.11
ENST00000445265.6
ENST00000650162.1
CDS CCA 72 bp ACAGATGCTGGGCCCCTCGCCAAGACGGTACTGTTCTaGGGGTTTCTCACTGGTGGCTTCACCTTGGATGGA +
Preference number: 6 (lower is better)
Translates to: TDAGPLAKTVLF*GFLTGGFTLDG
Trigger: TCCATCCAAGGTGAAGCCACCAGTGAGAAACCCCCAGAACAGTACCGTCTTGGCGAGGGGCCCAGCATCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000394269.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000506063.1
ENST00000513346.5
ENST00000513538.2
ENST00000514442.5
ENST00000515035.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CCA 72 bp CACAGGTGCTTGAGAGAGGGTCCTGGGCAGAGCTCATaGGATTCAAGAAGACTCCTGGTCCTGGGCAGAGGT +
Preference number: 6 (lower is better)
Translates to: HRCLREGPGQSS*DSRRLLVLGRG
Trigger: ACCTCTGCCCAGGACCAGGAGTCTTCTTGAATCCCATGAGCTCTGCCCAGGACCCTCTCTCAAGCACCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394269.7
CDS CCA 72 bp CAATGCAAGGCCACAAGGTCTCACTTGGAGAGGCTCTaGGGGCAGACAGGACCATGTTGGGAGGACTGTTGC +
Preference number: 6 (lower is better)
Translates to: QCKATRSHLERL*GQTGPCWEDCC
Trigger: GCAACAGTCCTCCCAACATGGTCCTGTCTGCCCCCAGAGCCTCTCCAAGTGAGACCTTGTGGCCTTGCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CCA 72 bp CACAGGTGCTTGAGAGAGGGTCCTGGGCAGAGCTCATaGGATTCAAGAAGACTCCTGGTCCTGGGTCAGTGG +
Preference number: 6 (lower is better)
Translates to: HRCLREGPGQSS*DSRRLLVLGQW
Trigger: CCACTGACCCAGGACCAGGAGTCTTCTTGAATCCCATGAGCTCTGCCCAGGACCCTCTCTCAAGCACCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513538.2
CDS CAA 72 bp GCCTGCTGGACCTCAGGAAGCTTAGGTTTTCTGAGCTaGTTGGTCCCTTTGGCCTGGACGGAGGTGCTCTGG +
Preference number: 6 (lower is better)
Translates to: ACWTSGSLGFLS*LVPLAWTEVLW
Trigger: CCAGAGCACCTCCGTCCAGGCCAAAGGGACCAACAAGCTCAGAAAACCTAAGCTTCCTGAGGTCCAGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000506630.1
ENST00000513346.5
ENST00000514442.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CAA 72 bp GCCAGAGTAGAGGAAACTGAGGGGCTGGAGTCTAGCTaGGGAGTGGCTTTTGAGGCCTGGGAATTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: ARVEETEGLESS*GVAFEAWELAG
Trigger: CCCAGCCAATTCCCAGGCCTCAAAAGCCACTCCCAAGCTAGACTCCAGCCCCTCAGTTTCCTCTACTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000514442.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CAA 72 bp AACATGCCTGCTGCCTGTTGGGGCTTTGCCTCCTGCTaGCCATCTGGGTCATCTTTGGCGGCCAGAGTAGAG +
Preference number: 6 (lower is better)
Translates to: NMPAACWGFASC*PSGSSLAARVE
Trigger: CTCTACTCTGGCCGCCAAAGATGACCCAGATGGCAAGCAGGAGGCAAAGCCCCAACAGGCAGCAGGCATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000514442.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CAA 90 bp TTGGTGGCCTGCTGGACCTCAGGAAGCTTAGGTTTTCTGAGCTTGTaGGTCCCTTTGGCCTGGACGGAGGTGCTCTGGGGACTTGTTGCA +
Preference number: 6 (lower is better)
Translates to: LVACWTSGSLGFLSL*VPLAWTEVLWGLVA
Trigger: TGCAACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGGACCAACAAGCTCAGAAAACCTAAGCTTCCTGAGGTCCAGCAGGCCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000506630.1
ENST00000513346.5
ENST00000514442.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CAA 90 bp GCTTTGGTGGCCTGCTGGACCTCAGGAAGCTTAGGTTTTCTGAGCTaGTTGGTCCCTTTGGCCTGGACGGAGGTGCTCTGGGGACTTGTT +
Preference number: 6 (lower is better)
Translates to: ALVACWTSGSLGFLS*LVPLAWTEVLWGLV
Trigger: AACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGGACCAACAAGCTCAGAAAACCTAAGCTTCCTGAGGTCCAGCAGGCCACCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000506630.1
ENST00000513346.5
ENST00000514442.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CAA 90 bp TTAGGGGACAACATGCCTGCTGCCTGTTGGGGCTTTGCCTCCTGCTaGCCATCTGGGTCATCTTTGGCGGCCAGAGTAGAGGAAACTGAG +
Preference number: 6 (lower is better)
Translates to: LGDNMPAACWGFASC*PSGSSLAARVEETE
Trigger: CTCAGTTTCCTCTACTCTGGCCGCCAAAGATGACCCAGATGGCAAGCAGGAGGCAAAGCCCCAACAGGCAGCAGGCATGTTGTCCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000514442.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS TCA 72 bp CAGCCACAGGTGCAGAATGAGTCTGAGATATGGAGCTaGGGCCAGAGCTATGGCTCCACCAGGCCACACAAC +
Preference number: 6 (lower is better)
Translates to: QPQVQNESEIWS*GQSYGSTRPHN
Trigger: GTTGTGTGGCCTGGTGGAGCCATAGCTCTGGCCTCAGCTCCATATCTCAGACTCATTCTGCACCTGTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS TCA 72 bp GTCCAGAGTGGCCAGGGGATTTCCAAGGCTTTACAATaGGTCAGAACAGCCTGGGGCCAGTCTACTGCCTGG +
Preference number: 6 (lower is better)
Translates to: VQSGQGISKALQ*VRTAWGQSTAW
Trigger: CCAGGCAGTAGACTGGCCCCAGGCTGTTCTGACTCATTGTAAAGCCTTGGAAATCCCCTGGCCACTCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS GCA 72 bp ATAGCTTCCGCTTGCGGCTCTCCCAGCCCTTCCTGCTaGTCTCCTTGGTGGTGTCCACCACCTTCTTTCTTT +
Preference number: 6 (lower is better)
Translates to: IASACGSPSPSC*SPWWCPPPSFF
Trigger: AAAGAAAGAAGGTGGTGGACACCACCAAGGAGAGCAGCAGGAAGGGCTGGGAGAGCCGCAAGCGGAAGCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS GCA 72 bp CCCTTTGGCCTGGACGGAGGTGCTCTGGGGACTTGTTaGAGGGAGTGTTCCCACAGCACTGTCAACCTAATT +
Preference number: 6 (lower is better)
Translates to: PFGLDGGALGTC*RECSHSTVNLI
Trigger: AATTAGGTTGACAGTGCTGTGGGAACACTCCCTGCAACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506630.1
CDS GCA 72 bp CCCTTTGGCCTGGACGGAGGTGCTCTGGGGACTTGTTaGAGGGAGTGTTCCCACAGCACTGTCAACAGATTA +
Preference number: 6 (lower is better)
Translates to: PFGLDGGALGTC*RECSHSTVNRL
Trigger: TAATCTGTTGACAGTGCTGTGGGAACACTCCCTGCAACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS GCA 72 bp ACCAAGGCTGGGGAAGCCCTGGAGCTGTCCCAAGTGTaGCCAGCTGGTACATATTTGACCCTTAGCTCCAGT +
Preference number: 6 (lower is better)
Translates to: TKAGEALELSQV*PAGTYLTLSSS
Trigger: ACTGGAGCTAAGGGTCAAATATGTACCAGCTGGGCACACTTGGGACAGCTCCAGGGCTTCCCCAGCCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CCA 72 bp CCACCTGTTTTAGGGGACAACATGCCTGCTGCCTGTTaGGGCTTTGCCTCCTGCTTGCCATCTGGGTCATCT +
Preference number: 6 (lower is better)
Translates to: PPVLGDNMPAAC*GFASCLPSGSS
Trigger: AGATGACCCAGATGGCAAGCAGGAGGCAAAGCCCCAACAGGCAGCAGGCATGTTGTCCCCTAAAACAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CAA 72 bp ATGCTTGATGGCAAGTCCGCCCCCAGGACTGAGGAGTaGGTAGATGCTAGTCTTGGGGTGGCTTTGGCGGTT +
Preference number: 6 (lower is better)
Translates to: MLDGKSAPRTEE*VDASLGVALAV
Trigger: AACCGCCAAAGCCACCCCAAGACTAGCATCTACCAACTCCTCAGTCCTGGGGGCGGACTTGCCATCAAGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000394269.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000513538.2
ENST00000515516.1
ENST00000643257.2
ENST00000646961.1
ENST00000650162.1
CDS CAA 72 bp TGCTGGACCTCAGGAAGCTTAGGTTTTCTGAGCTTGTaGGTCCCTTTGGCCTGGACGGAGGTGCTCTGGGGA +
Preference number: 6 (lower is better)
Translates to: CWTSGSLGFLSL*VPLAWTEVLWG
Trigger: TCCCCAGAGCACCTCCGTCCAGGCCAAAGGGACCAACAAGCTCAGAAAACCTAAGCTTCCTGAGGTCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000506630.1
ENST00000513346.5
ENST00000514442.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CAA 72 bp TCCCTTTGGCCTGGACGGAGGTGCTCTGGGGACTTGTaGCAGGGAGTGTTCCCACAGCACTGTCAACCTAAT +
Preference number: 6 (lower is better)
Translates to: SLWPGRRCSGDL*QGVFPQHCQPN
Trigger: ATTAGGTTGACAGTGCTGTGGGAACACTCCCTGCAACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506630.1
CDS CAA 72 bp TCCCTTTGGCCTGGACGGAGGTGCTCTGGGGACTTGTaGCAGGGAGTGTTCCCACAGCACTGTCAACAGATT +
Preference number: 6 (lower is better)
Translates to: SLWPGRRCSGDL*QGVFPQHCQQI
Trigger: AATCTGTTGACAGTGCTGTGGGAACACTCCCTGCAACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CAA 72 bp CATCTTCAGGTCCAATGCAAGGCCACAAGGTCTCACTaGGAGAGGCTCTGGGGGCAGACAGGACCATGTTGG +
Preference number: 6 (lower is better)
Translates to: HLQVQCKATRSH*ERLWGQTGPCW
Trigger: CCAACATGGTCCTGTCTGCCCCCAGAGCCTCTCCAAGTGAGACCTTGTGGCCTTGCATTGGACCTGAAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CAA 90 bp TGCTGGACCTCAGGAAGCTTAGGTTTTCTGAGCTTGTTGGTCCCTTaGGCCTGGACGGAGGTGCTCTGGGGACTTGTTGCAGGGAGTGTT +
Preference number: 6 (lower is better)
Translates to: CWTSGSLGFLSLLVP*AWTEVLWGLVAGSV
Trigger: AACACTCCCTGCAACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGGACCAACAAGCTCAGAAAACCTAAGCTTCCTGAGGTCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000506630.1
ENST00000513346.5
ENST00000514442.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CAA 90 bp GCTTGTTGGTCCCTTTGGCCTGGACGGAGGTGCTCTGGGGACTTGTaGCAGGGAGTGTTCCCACAGCACTGTCAACCTAATTCGGTGAAA +
Preference number: 6 (lower is better)
Translates to: ACWSLWPGRRCSGDL*QGVFPQHCQPNSVK
Trigger: TTTCACCGAATTAGGTTGACAGTGCTGTGGGAACACTCCCTGCAACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGGACCAACAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506630.1
CDS CAA 90 bp TCTCCTGCATGTGCTGAGTGTCCTCCAAACGTGACTGTCAGCCTATaGTCTAAGCTATCCTCTGAGGCCCAAGGCCCACACCGTGAGCCT +
Preference number: 6 (lower is better)
Translates to: SPACAECPPNVTVSL*SKLSSEAQGPHREP
Trigger: AGGCTCACGGTGTGGGCCTTGGGCCTCAGAGGATAGCTTAGACAATAGGCTGACAGTCACGTTTGGAGGACACTCAGCACATGCAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS TCA 72 bp GGTGGCTTCACCTTGGATGGAGACCTCTGCTTGGCTTaGGCAGCTGCAGTGACAACTTTTCCAGGGGCTGAA +
Preference number: 6 (lower is better)
Translates to: GGFTLDGDLCLA*AAAVTTFPGAE
Trigger: TTCAGCCCCTGGAAAAGTTGTCACTGCAGCTGCTCAAGCCAAGCAGAGGTCTCCATCCAAGGTGAAGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000394269.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000506063.1
ENST00000513346.5
ENST00000513538.2
ENST00000514442.5
ENST00000515035.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS TCA 72 bp GAGTGTTCCCACAGCACTGTCAACAGATTAGGCCACTaGGGCCGAGGGAGGCAAACCAAGTGCAGAGGTCAT +
Preference number: 6 (lower is better)
Translates to: ECSHSTVNRLGH*GRGRQTKCRGH
Trigger: ATGACCTCTGCACTTGGTTTGCCTCCCTCGGCCTCAGTGGCCTAATCTGTTGACAGTGCTGTGGGAACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS TCA 72 bp ACACTTGCTCCACAAGCCAAAAGACGCAGCTTCCTCTaGGGCAAGGGCTATCCTACCAGGTGCATCAGCACC +
Preference number: 6 (lower is better)
Translates to: TLAPQAKRRSFL*GKGYPTRCIST
Trigger: GGTGCTGATGCACCTGGTAGGATAGCCCTTGCCTCAGAGGAAGCTGCGTCTTTTGGCTTGTGGAGCAAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS GCA 72 bp CCCCACCTGCACTTTGATGAGCATCTTCAGGTCCAATaGAAGGCCACAAGGTCTCACTTGGAGAGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: PHLHFDEHLQVQ*KATRSHLERLW
Trigger: CCAGAGCCTCTCCAAGTGAGACCTTGTGGCCTTGCATTGGACCTGAAGATGCTCATCAAAGTGCAGGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS GCA 72 bp TTTACAATGAGTCAGAACAGCCTGGGGCCAGTCTACTaGCTGGGGTCTCCTGCATGTGCTGAGTGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: FTMSQNSLGPVY*LGSPACAECPP
Trigger: TGGAGGACACTCAGCACATGCAGGAGACCCCAGGCAGTAGACTGGCCCCAGGCTGTTCTGACTCATTGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS GCA 72 bp GGAAGGCAGTCCCACTCACCTTGGCTTTTTCTTTCATaGTTGATGGCAAGTCCGCCCCCAGGACTGAGGAGT +
Preference number: 6 (lower is better)
Translates to: GRQSHSPWLFLS*LMASPPPGLRS
Trigger: ACTCCTCAGTCCTGGGGGCGGACTTGCCATCAAGCATGAAAGAAAAAGCCAAGGTGAGTGGGACTGCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS GCA 72 bp TGGCAAGACTTTGTTGGCTTTGGCGGTTTCGGCTTCTaGTTCTTCCTCCTCTTCCGAGCTCTCCGAGGTGCT +
Preference number: 6 (lower is better)
Translates to: WQDFVGFGGFGF*FFLLFRALRGA
Trigger: AGCACCTCGGAGAGCTCGGAAGAGGAGGAAGAAGCAGAAGCCGAAACCGCCAAAGCCAACAAAGTCTTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643812.1
CDS CCA 72 bp AGCTTAGGTTTTCTGAGCTTGTTGGTCCCTTTGGCCTaGACGGAGGTGCTCTGGGGACTTGTTGCAGGGAGT +
Preference number: 6 (lower is better)
Translates to: SLGFLSLLVPLA*TEVLWGLVAGS
Trigger: ACTCCCTGCAACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGGACCAACAAGCTCAGAAAACCTAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000506630.1
ENST00000513346.5
ENST00000514442.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CAA 72 bp CTGGAGCTGTCCCAAGTGTGCCCAGCTGGTACATATTaGACCCTTAGCTCCAGTAGGGTCAGGGAGTGTGGA +
Preference number: 6 (lower is better)
Translates to: LELSQVCPAGTY*TLSSSRVRECG
Trigger: TCCACACTCCCTGACCCTACTGGAGCTAAGGGTCAAATATGTACCAGCTGGGCACACTTGGGACAGCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CAA 90 bp TTTGATGAGCATCTTCAGGTCCAATGCAAGGCCACAAGGTCTCACTaGGAGAGGCTCTGGGGGCAGACAGGACCATGTTGGGAGGACTGT +
Preference number: 6 (lower is better)
Translates to: FDEHLQVQCKATRSH*ERLWGQTGPCWEDC
Trigger: ACAGTCCTCCCAACATGGTCCTGTCTGCCCCCAGAGCCTCTCCAAGTGAGACCTTGTGGCCTTGCATTGGACCTGAAGATGCTCATCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS TCA 72 bp TGGAGCTGTCCCAAGTGTGCCCAGCTGGTACATATTTaGCCCTTAGCTCCAGTAGGGTCAGGGAGTGTGGAT +
Preference number: 6 (lower is better)
Translates to: WSCPKCAQLVHI*PLAPVGSGSVD
Trigger: ATCCACACTCCCTGACCCTACTGGAGCTAAGGGTCAAATATGTACCAGCTGGGCACACTTGGGACAGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS TCA 72 bp CCCAGAGAGGTGAAGGGACTAAGATCCCACAACTGGTaGCACAGGTTGAGCTCTGAATCCAGGTGGGGCAAT +
Preference number: 6 (lower is better)
Translates to: PREVKGLRSHNW*HRLSSESRWGN
Trigger: ATTGCCCCACCTGGATTCAGAGCTCAACCTGTGTCACCAGTTGTGGGATCTTAGTCCCTTCACCTCTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS CCA 72 bp CATGAAGGTATGCCACAGGTGCTTGAGAGAGGGTCCTaGGCAGAGCTCATGGGATTCAAGAAGACTCCTGGT +
Preference number: 6 (lower is better)
Translates to: HEGMPQVLERGS*AELMGFKKTPG
Trigger: ACCAGGAGTCTTCTTGAATCCCATGAGCTCTGCCCAGGACCCTCTCTCAAGCACCTGTGGCATACCTTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394269.7
ENST00000513538.2
CDS CCA 72 bp TTACCTGTTTTAGGGGACAACATGCCTGCTGCCTGTTaGGGCTTTGCCTCCTGCTTGCCATCTGGGTCATCT +
Preference number: 6 (lower is better)
Translates to: LPVLGDNMPAAC*GFASCLPSGSS
Trigger: AGATGACCCAGATGGCAAGCAGGAGGCAAAGCCCCAACAGGCAGCAGGCATGTTGTCCCCTAAAACAGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CAA 72 bp TCAGGAAGCTTAGGTTTTCTGAGCTTGTTGGTCCCTTaGGCCTGGACGGAGGTGCTCTGGGGACTTGTTGCA +
Preference number: 6 (lower is better)
Translates to: SGSLGFLSLLVP*AWTEVLWGLVA
Trigger: TGCAACAAGTCCCCAGAGCACCTCCGTCCAGGCCAAAGGGACCAACAAGCTCAGAAAACCTAAGCTTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000506630.1
ENST00000513346.5
ENST00000514442.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CAA 72 bp TGTGCTGAGTGTCCTCCAAACGTGACTGTCAGCCTATaGTCTAAGCTATCCTCTGAGGCCCAAGGCCCACAC +
Preference number: 6 (lower is better)
Translates to: CAECPPNVTVSL*SKLSSEAQGPH
Trigger: GTGTGGGCCTTGGGCCTCAGAGGATAGCTTAGACAATAGGCTGACAGTCACGTTTGGAGGACACTCAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS TCA 72 bp TGGGGTCTCCTGCATGTGCTGAGTGTCCTCCAAACGTaGCTGTCAGCCTATTGTCTAAGCTATCCTCTGAGG +
Preference number: 6 (lower is better)
Translates to: WGLLHVLSVLQT*LSAYCLSYPLR
Trigger: CCTCAGAGGATAGCTTAGACAATAGGCTGACAGTCACGTTTGGAGGACACTCAGCACATGCAGGAGACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS GCA 72 bp AAGAGGAAAGAAATCGCCTACCCCAGGTGTAGAATGTaGCCAGTGGCCCACTGCAGCAGGCATCATCCTTAT +
Preference number: 6 (lower is better)
Translates to: KRKEIAYPRCRM*PVAHCSRHHPY
Trigger: ATAAGGATGATGCCTGCTGCAGTGGGCCACTGGGCACATTCTACACCTGGGGTAGGCGATTTCTTTCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS GCA 72 bp GCCAGGCCTGCATCAGTCATTTCCATCACACACCTGTaGCTTGGCAGTGCTGGAGTTTGTCATCCTACACTT +
Preference number: 6 (lower is better)
Translates to: ARPASVISITHL*LGSAGVCHPTL
Trigger: AAGTGTAGGATGACAAACTCCAGCACTGCCAAGGCACAGGTGTGTGATGGAAATGACTGATGCAGGCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS CCA 72 bp CACCTAACAATTCTATTGGTATTGGCTGCCTGGTGCTaGCATGAGGATCTGAGGCTGAGCCCAGACTTGCAG +
Preference number: 6 (lower is better)
Translates to: HLTILLVLAAWC*HEDLRLSPDLQ
Trigger: CTGCAAGTCTGGGCTCAGCCTCAGATCCTCATGCCAGCACCAGGCAGCCAATACCAATAGAATTGTTAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS CAA 72 bp GGGCGACCTTGGCAGATGCAGTGGTATTGGTTTTCTTaGGGCAGGCCTTGGTCTGAGGAATTTTCAGAGCTG +
Preference number: 6 (lower is better)
Translates to: GRPWQMQWYWFS*GRPWSEEFSEL
Trigger: CAGCTCTGAAAATTCCTCAGACCAAGGCCTGCCCAAAGAAAACCAATACCACTGCATCTGCCAAGGTCGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000394269.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000513538.2
ENST00000514442.5
ENST00000515035.5
ENST00000643257.2
ENST00000650162.1
ENST00000674413.1
CDS CAA 72 bp ATGCTTGATGGCAAGTCCGCCCCCAGGACTGAGGAGTaGGTAGATGCTAGTCTTGGGGCTGCAAGAAACAAA +
Preference number: 6 (lower is better)
Translates to: MLDGKSAPRTEE*VDASLGAARNK
Trigger: TTTGTTTCTTGCAGCCCCAAGACTAGCATCTACCAACTCCTCAGTCCTGGGGGCGGACTTGCCATCAAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS TCA 72 bp AACAATTCTATTGGTATTGGCTGCCTGGTGCTGGCATaGGGATCTGAGGCTGAGCCCAGACTTGCAGGAATG +
Preference number: 6 (lower is better)
Translates to: NNSIGIGCLVLA*GSEAEPRLAGM
Trigger: CATTCCTGCAAGTCTGGGCTCAGCCTCAGATCCTCATGCCAGCACCAGGCAGCCAATACCAATAGAATTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS TCA 72 bp GGTTTTAGTAGCAGGTTTTACCTAAGGAGATGTGGATaGCAGCAGACGGAGGAGGGCATGGTGGAACTGGAG +
Preference number: 6 (lower is better)
Translates to: GFSSRFYLRRCG*QQTEEGMVELE
Trigger: CTCCAGTTCCACCATGCCCTCCTCCGTCTGCTGTCATCCACATCTCCTTAGGTAAAACCTGCTACTAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS GCA 72 bp CCTCACCACAAGTCTTCCTACTGCTTCAACACTCCTTaGACACTTATCGCTAGTCACAGCATGCTAGGTGCG +
Preference number: 6 (lower is better)
Translates to: PHHKSSYCFNTP*TLIASHSMLGA
Trigger: CGCACCTAGCATGCTGTGACTAGCGATAAGTGTGCAAGGAGTGTTGAAGCAGTAGGAAGACTTGTGGTGAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS GCA 72 bp TTGACCCTTAGCTCCAGTAGGGTCAGGGAGTGTGGATaGCCCAGGTTAGGTGAATTGAATAATCCAGTCTGC +
Preference number: 6 (lower is better)
Translates to: LTLSSSRVRECG*PRLGELNNPVC
Trigger: GCAGACTGGATTATTCAATTCACCTAACCTGGGGCATCCACACTCCCTGACCCTACTGGAGCTAAGGGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS GCA 72 bp TCTCACCTAACAATTCTATTGGTATTGGCTGCCTGGTaGTGGCATGAGGATCTGAGGCTGAGCCCAGACTTG +
Preference number: 6 (lower is better)
Translates to: SHLTILLVLAAW*WHEDLRLSPDL
Trigger: CAAGTCTGGGCTCAGCCTCAGATCCTCATGCCAGCACCAGGCAGCCAATACCAATAGAATTGTTAGGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS CCA 72 bp CCTGAACACTTCAGTAGGGCCAGGAACTGTGTTAGATaGGGCACACATGCAGCCTCATTTGATCCTTCCAAC +
Preference number: 6 (lower is better)
Translates to: PEHFSRARNCVR*GTHAASFDPSN
Trigger: GTTGGAAGGATCAAATGAGGCTGCATGTGTGCCCCATCTAACACAGTTCCTGGCCCTACTGAAGTGTTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506630.1
CDS CAA 72 bp TTCCATCACACACCTGTGCCTTGGCAGTGCTGGAGTTaGTCATCCTACACTTCTGTAGGATGTAGCAAGCCC +
Preference number: 6 (lower is better)
Translates to: FHHTPVPWQCWS*SSYTSVGCSKP
Trigger: GGGCTTGCTACATCCTACAGAAGTGTAGGATGACAAACTCCAGCACTGCCAAGGCACAGGTGTGTGATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS CAA 90 bp TCTCTTGTCGGATTTCTTCTTCTCCTTCTTGCTCTTTGGGTTGCTTaGATCTCCACCTTCAACCGTCCCCATCCCCTTCTGAAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: SLVGFLLLLLALWVA*ISTFNRPHPLLKLL
Trigger: GAGGAGCTTCAGAAGGGGATGGGGACGGTTGAAGGTGGAGATCAAAGCAACCCAAAGAGCAAGAAGGAGAAGAAGAAATCCGACAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000323668.11
ENST00000377797.7
ENST00000427724.7
ENST00000439160.6
ENST00000445265.6
ENST00000504761.6
ENST00000513346.5
ENST00000515516.1
ENST00000643257.2
ENST00000650162.1
CDS TCA 72 bp ACTAAGATCCCACAACTGGTGACACAGGTTGAGCTCTaGATCCAGGTGGGGCAATTACTCACAACCCTATCC +
Preference number: 6 (lower is better)
Translates to: TKIPQLVTQVEL*IQVGQLLTTLS
Trigger: GGATAGGGTTGTGAGTAATTGCCCCACCTGGATTCAGAGCTCAACCTGTGTCACCAGTTGTGGGATCTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS GCA 72 bp GCCTACCCCAGGTGTAGAATGTGCCCAGTGGCCCACTaGAGCAGGCATCATCCTTATCTTTATAGAAAAGTA +
Preference number: 6 (lower is better)
Translates to: AYPRCRMCPVAH*SRHHPYLYRKV
Trigger: TACTTTTCTATAAAGATAAGGATGATGCCTGCTGCAGTGGGCCACTGGGCACATTCTACACCTGGGGTAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS CCA 72 bp GCCTGCATCAGTCATTTCCATCACACACCTGTGCCTTaGCAGTGCTGGAGTTTGTCATCCTACACTTCTGTA +
Preference number: 6 (lower is better)
Translates to: ACISHFHHTPVP*QCWSLSSYTSV
Trigger: TACAGAAGTGTAGGATGACAAACTCCAGCACTGCCAAGGCACAGGTGTGTGATGGAAATGACTGATGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS CAA 72 bp GCTTTCCACTGTTCCAGAAACATGGCCCTGGAGTTTTaGGGAGCCAGTGAAGGGAGTCTGATACCAAAAAGC +
Preference number: 6 (lower is better)
Translates to: AFHCSRNMALEF*GASEGSLIPKS
Trigger: GCTTTTTGGTATCAGACTCCCTTCACTGGCTCCCAAAAACTCCAGGGCCATGTTTCTGGAACAGTGGAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CAA 72 bp CCCCTACCAGGCACCTTAAATCCCATAGGCAATAGCTaGGAAGGCAGTCCCACTCACCTTGGCTTTTTCTTT +
Preference number: 6 (lower is better)
Translates to: PLPGTLNPIGNS*EGSPTHLGFFF
Trigger: AAAGAAAAAGCCAAGGTGAGTGGGACTGCCTTCCAAGCTATTGCCTATGGGATTTAAGGTGCCTGGTAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS CAA 90 bp ATGAATGGCAAACAGGTTTCATCTCACCTAACAATTCTATTGGTATaGGCTGCCTGGTGCTGGCATGAGGATCTGAGGCTGAGCCCAGAC +
Preference number: 6 (lower is better)
Translates to: MNGKQVSSHLTILLV*AAWCWHEDLRLSPD
Trigger: GTCTGGGCTCAGCCTCAGATCCTCATGCCAGCACCAGGCAGCCAATACCAATAGAATTGTTAGGTGAGATGAAACCTGTTTGCCATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS TCA 72 bp GGTCCACCAGGAGCAAGAGAGAAGAGGATGGTAACATaGAGCTATGTGTCTGCATCCTTGATGGATTCCCAA +
Preference number: 6 (lower is better)
Translates to: GPPGAREKRMVT*SYVSASLMDSQ
Trigger: TTGGGAATCCATCAAGGATGCAGACACATAGCTTCATGTTACCATCCTCTTCTCTCTTGCTCCTGGTGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS TCA 72 bp AGAACAAGAGTGACAGACACATCTGGTATGGCATGGTaGACTAAGAGCACAGGCCACTTGCATCTGAACCCA +
Preference number: 6 (lower is better)
Translates to: RTRVTDTSGMAW*TKSTGHLHLNP
Trigger: TGGGTTCAGATGCAAGTGGCCTGTGCTCTTAGTTCACCATGCCATACCAGATGTGTCTGTCACTCTTGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS CCA 72 bp AGTCATTTCCATCACACACCTGTGCCTTGGCAGTGCTaGAGTTTGTCATCCTACACTTCTGTAGGATGTAGC +
Preference number: 6 (lower is better)
Translates to: SHFHHTPVPWQC*SLSSYTSVGCS
Trigger: GCTACATCCTACAGAAGTGTAGGATGACAAACTCCAGCACTGCCAAGGCACAGGTGTGTGATGGAAATGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS CAA 90 bp ATCAGTCATTTCCATCACACACCTGTGCCTTGGCAGTGCTGGAGTTaGTCATCCTACACTTCTGTAGGATGTAGCAAGCCCTGCTATCTT +
Preference number: 6 (lower is better)
Translates to: ISHFHHTPVPWQCWS*SSYTSVGCSKPCYL
Trigger: AAGATAGCAGGGCTTGCTACATCCTACAGAAGTGTAGGATGACAAACTCCAGCACTGCCAAGGCACAGGTGTGTGATGGAAATGACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS CAA 90 bp GTAGGGCCAGGAACTGTGTTAGATGGGGCACACATGCAGCCTCATTaGATCCTTCCAACTACGAAAGGTACTGTAATTCCTTCTTACAGA +
Preference number: 6 (lower is better)
Translates to: VGPGTVLDGAHMQPH*ILPTTKGTVIPSYR
Trigger: TCTGTAAGAAGGAATTACAGTACCTTTCGTAGTTGGAAGGATCAAATGAGGCTGCATGTGTGCCCCATCTAACACAGTTCCTGGCCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506630.1
CDS TCA 72 bp TTGGGAGCCAGTGAAGGGAGTCTGATACCAAAAAGCTaGGAGTGGTCAAACAGCAAAGTCAGGTCTCTGAAA +
Preference number: 6 (lower is better)
Translates to: LGASEGSLIPKS*EWSNSKVRSLK
Trigger: TTTCAGAGACCTGACTTTGCTGTTTGACCACTCTCAGCTTTTTGGTATCAGACTCCCTTCACTGGCTCCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CCA 72 bp TTCAAGTCATTCTTCTGCCTTGGCCTCTCAAGTAATTaGGACTACAAGCGTGCACCATCACACCGGCTAATT +
Preference number: 6 (lower is better)
Translates to: FKSFFCLGLSSN*DYKRAPSHRLI
Trigger: AATTAGCCGGTGTGATGGTGCACGCTTGTAGTCCCAATTACTTGAGAGGCCAAGGCAGAAGAATGACTTGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CCA 72 bp TGCTGTTTTGTATGGTTAAGACACAGAGGTCCAGAGTaGCCAGGGGATTTCCAAGGCTTTACAATGAGTCAG +
Preference number: 6 (lower is better)
Translates to: CCFVWLRHRGPE*PGDFQGFTMSQ
Trigger: CTGACTCATTGTAAAGCCTTGGAAATCCCCTGGCCACTCTGGACCTCTGTGTCTTAACCATACAAAACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CAA 72 bp GGAACTGTGTTAGATGGGGCACACATGCAGCCTCATTaGATCCTTCCAACTACGAAAGGTACTGTAATTCCT +
Preference number: 6 (lower is better)
Translates to: GTVLDGAHMQPH*ILPTTKGTVIP
Trigger: AGGAATTACAGTACCTTTCGTAGTTGGAAGGATCAAATGAGGCTGCATGTGTGCCCCATCTAACACAGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506630.1
CDS CAA 72 bp AATGGCAAACAGGTTTCATCTCACCTAACAATTCTATaGGTATTGGCTGCCTGGTGCTGGCATGAGGATCTG +
Preference number: 6 (lower is better)
Translates to: NGKQVSSHLTIL*VLAAWCWHEDL
Trigger: CAGATCCTCATGCCAGCACCAGGCAGCCAATACCAATAGAATTGTTAGGTGAGATGAAACCTGTTTGCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS CCA 72 bp GTGGTCAAACAGCAAAGTCAGGTCTCTGAAATCATTTaGATTGACTTCCTCATGAAGTTGTACAGGTGGGGA +
Preference number: 6 (lower is better)
Translates to: VVKQQSQVSEII*IDFLMKLYRWG
Trigger: TCCCCACCTGTACAACTTCATGAGGAAGTCAATCCAAATGATTTCAGAGACCTGACTTTGCTGTTTGACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CAA 72 bp CTGAACCCAATCTTACCACTTCTTAGCTGTGTGAGTTaGGGTAAACTACCCCTTCAATCTGTTTCCCAATCT +
Preference number: 6 (lower is better)
Translates to: LNPILPLLSCVS*GKLPLQSVSQS
Trigger: AGATTGGGAAACAGATTGAAGGGGTAGTTTACCCAAACTCACACAGCTAAGAAGTGGTAAGATTGGGTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS CAA 72 bp CCAAGCTTCCCTGGGACTCTGACAGGGAGAGTCATTTaGTATAACGTTAACGTATGCACAATAACTAACATG +
Preference number: 6 (lower is better)
Translates to: PSFPGTLTGRVI*YNVNVCTITNM
Trigger: CATGTTAGTTATTGTGCATACGTTAACGTTATACAAAATGACTCTCCCTGTCAGAGTCCCAGGGAAGCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515035.5
CDS CCA 72 bp GACTATTTTCTACATGTGCCATGCCTTGACACAGACTaGATACATCAACTGCTGTTTTGTATGGTTAAGACA +
Preference number: 6 (lower is better)
Translates to: DYFLHVPCLDTD*IHQLLFCMVKT
Trigger: TGTCTTAACCATACAAAACAGCAGTTGATGTATCCAGTCTGTGTCAAGGCATGGCACATGTAGAAAATAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514442.5
CDS CAA 72 bp ATCTTATCATTACTTCATAATTACTTTGAGACATTGTaGCTAATGCTCCAGGCAATCGCAGAGGCACAATTC +
Preference number: 6 (lower is better)
Translates to: ILSLLHNYFETL*LMLQAIAEAQF
Trigger: GAATTGTGCCTCTGCGATTGCCTGGAGCATTAGCAACAATGTCTCAAAGTAATTATGAAGTAATGATAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515035.5