RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TCN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000185339

Ensembl transcript IDs: ENST00000215838.8, ENST00000405742.7, ENST00000407817.3, ENST00000423350.1, ENST00000450638.5, ENST00000471659.1, ENST00000493542.1

Found 452 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCACAACCAGCTCGGAGCTGCCACTCTAACAGCAGAGTGGAGAGCTaGGGTCAGGGCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAG +
Preference number: 1 (lower is better)
Translates to: PQPARSCHSNSRVES*GQGHSPRAEEAFLQ
Trigger: CTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGCCCTGACCCCAGCTCTCCACTCTGCTGTTAGAGTGGCAGCTCCGAGCTGGTTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR CCA 90 bp CTACTGTGCCACAACCAGCTCGGAGCTGCCACTCTAACAGCAGAGTaGAGAGCTGGGGTCAGGGCCATAGCCCCCGGGCTGAGGAGGCCT +
Preference number: 1 (lower is better)
Translates to: LLCHNQLGAATLTAE*RAGVRAIAPGLRRP
Trigger: AGGCCTCCTCAGCCCGGGGGCTATGGCCCTGACCCCAGCTCTCCACTCTGCTGTTAGAGTGGCAGCTCCGAGCTGGTTGTGGCACAGTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR GCA 90 bp GGGCCAGGCTGGCCAGACTTGGCCAGAAAGACTTCCCAGGGAAGATaGTTGGCTCTCTGCTCCAAGGTGGGCCATGGTATAGGGCCCTCG +
Preference number: 1 (lower is better)
Translates to: GPGWPDLARKTSQGR*LALCSKVGHGIGPS
Trigger: CGAGGGCCCTATACCATGGCCCACCTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGAAGTCTTTCTGGCCAAGTCTGGCCAGCCTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR GCA 90 bp CCTGCTGAGGTCTCCCCAGCTACTGTGCCACAACCAGCTCGGAGCTaGCACTCTAACAGCAGAGTGGAGAGCTGGGGTCAGGGCCATAGC +
Preference number: 1 (lower is better)
Translates to: PAEVSPATVPQPARS*HSNSRVESWGQGHS
Trigger: GCTATGGCCCTGACCCCAGCTCTCCACTCTGCTGTTAGAGTGGCAGCTCCGAGCTGGTTGTGGCACAGTAGCTGGGGAGACCTCAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR CCA 90 bp GACTTCCCAGGGAAGATGCTTGGCTCTCTGCTCCAAGGTGGGCCATaGTATAGGGCCCTCGAAGGGCTTGTGGCTGGGGTGATCCCAGGG +
Preference number: 1 (lower is better)
Translates to: DFPGKMLGSLLQGGP*YRALEGLVAGVIPG
Trigger: CCCTGGGATCACCCCAGCCACAAGCCCTTCGAGGGCCCTATACCATGGCCCACCTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR GCA 90 bp ATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTaGAGGGCCAGGCTGGCCAGACTTGGCCAGAAAGACTTCCCAGGG +
Preference number: 1 (lower is better)
Translates to: MLHAHQTMGWPSWET*RARLARLGQKDFPG
Trigger: CCCTGGGAAGTCTTTCTGGCCAAGTCTGGCCAGCCTGGCCCTGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR CCA 90 bp ATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCAGGGCCAGGCTaGCCAGACTTGGCCAGAAAGACTTCCCAGGGAAGATGCTTGGCT +
Preference number: 1 (lower is better)
Translates to: IRPWGGLHGRPAGPG*PDLARKTSQGRCLA
Trigger: AGCCAAGCATCTTCCCTGGGAAGTCTTTCTGGCCAAGTCTGGCCAGCCTGGCCCTGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR GCA 90 bp CCAGACTTGGCCAGAAAGACTTCCCAGGGAAGATGCTTGGCTCTCTaGTCCAAGGTGGGCCATGGTATAGGGCCCTCGAAGGGCTTGTGG +
Preference number: 1 (lower is better)
Translates to: PDLARKTSQGRCLAL*SKVGHGIGPSKGLW
Trigger: CCACAAGCCCTTCGAGGGCCCTATACCATGGCCCACCTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGAAGTCTTTCTGGCCAAGTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR CCA 90 bp AATGTCATCACTGCTGGCATTCCCATCACTCCCCCAATGCCCACATaGCGGCTCAGGCACCCTCCACTCCTCCCTGATGGGGTTACTTCC +
Preference number: 1 (lower is better)
Translates to: NVITAGIPITPPMPT*RLRHPPLLPDGVTS
Trigger: GGAAGTAACCCCATCAGGGAGGAGTGGAGGGTGCCTGAGCCGCCATGTGGGCATTGGGGGAGTGATGGGAATGCCAGCAGTGATGACATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215838.8
3UTR TCA 90 bp ATCAATGCTTTAATTTTGTCAGAGGCAGGCACTGAGCAGCCCTGCTaGGGTCTCCCCAGCTACTGTGCCACAACCAGCTCGGAGCTGCCA +
Preference number: 1 (lower is better)
Translates to: INALILSEAGTEQPC*GLPSYCATTSSELP
Trigger: TGGCAGCTCCGAGCTGGTTGTGGCACAGTAGCTGGGGAGACCTCAGCAGGGCTGCTCAGTGCCTGCCTCTGACAAAATTAAAGCATTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000407817.3
ENST00000450638.5
3UTR TCA 90 bp AGGTCCACAGGCCATCAATGCTTTAATTTTGTCAGAGGCAGGCACTaGGCAGCCCTGCTGAGGTCTCCCCAGCTACTGTGCCACAACCAG +
Preference number: 1 (lower is better)
Translates to: RSTGHQCFNFVRGRH*AALLRSPQLLCHNQ
Trigger: CTGGTTGTGGCACAGTAGCTGGGGAGACCTCAGCAGGGCTGCTCAGTGCCTGCCTCTGACAAAATTAAAGCATTGATGGCCTGTGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215838.8
ENST00000407817.3
3UTR GCA 90 bp CTCAGTCATAGTAGTGGGTGCTCAGTCAGTAGTCAATGTCATCACTaGTGGCATTCCCATCACTCCCCCAATGCCCACATGGCGGCTCAG +
Preference number: 1 (lower is better)
Translates to: LSHSSGCSVSSQCHH*WHSHHSPNAHMAAQ
Trigger: CTGAGCCGCCATGTGGGCATTGGGGGAGTGATGGGAATGCCAGCAGTGATGACATTGACTACTGACTGAGCACCCACTACTATGACTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215838.8
3UTR CCA 90 bp AGTCATAGTAGTGGGTGCTCAGTCAGTAGTCAATGTCATCACTGCTaGCATTCCCATCACTCCCCCAATGCCCACATGGCGGCTCAGGCA +
Preference number: 1 (lower is better)
Translates to: SHSSGCSVSSQCHHC*HSHHSPNAHMAAQA
Trigger: TGCCTGAGCCGCCATGTGGGCATTGGGGGAGTGATGGGAATGCCAGCAGTGATGACATTGACTACTGACTGAGCACCCACTACTATGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215838.8
3UTR-3UTR TCA 90 bp TGGAGAGCTGGGGTCAGGGCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGGGCTTGTGGCTGGGGTaGTCCCAGGGGGCATTGCTC +
Preference number: 2 (lower is better)
Translates to: WRAGVRAIAPGLRRPSCRGLWLG*SQGALL
Trigger: GAGCAATGCCCCCTGGGATCACCCCAGCCACAAGCC...CCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGCCCTGACCCCAGCTCTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR TCA 90 bp AGAGCTGGGGTCAGGGCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCGGCTTGTGGCTGGGGTaGTCCCAGGGGGCATTGCTC +
Preference number: 2 (lower is better)
Translates to: RAGVRAIAPGLRRPSCRTGLWLG*SQGALL
Trigger: GAGCAATGCCCCCTGGGATCACCCCAGCCACAAGCC...GGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGCCCTGACCCCAGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR GCA 90 bp GGGCCATGGTATAGGGCCCTCGAAGGGCTTGTGGCTGGGGTGATCCCAGGGGGCGGGAGTGTGCGAGGCTaGTGGGATGAGGGAGCTCAG +
Preference number: 2 (lower is better)
Translates to: GPWYRALEGLVAGVIPGGGSVRG*WDEGAQ
Trigger: CTGAGCTCCCTCATCCCAGCAGCCTCGCACACTCCC...GCCCCCTGGGATCACCCCAGCCACAAGCCCTTCGAGGGCCCTATACCATGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR CCA 90 bp GGGCCATGGTATAGGGCCCTCGAAGGGCTTGTGGCTGGGGTGATCCCAGGGGGCAAAGTGCACAGGAGGTaGCAGCAGGGTCAGGCGAGT +
Preference number: 2 (lower is better)
Translates to: GPWYRALEGLVAGVIPGGKVHRR*QQGQAS
Trigger: ACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTT...GCCCCCTGGGATCACCCCAGCCACAAGCCCTTCGAGGGCCCTATACCATGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR CCA 90 bp GCAGCCCTGCTGAGGTCTCCCCAGCTACTGTGCCACAACCAGCTCGGAGCTGCCCTCCAAGGTGGGCCATaGTATAGGGCCCTCGAAGGG +
Preference number: 2 (lower is better)
Translates to: AALLRSPQLLCHNQLGAALQGGP*YRALEG
Trigger: CCCTTCGAGGGCCCTATACCATGGCCCACCTTGGAG...GGCAGCTCCGAGCTGGTTGTGGCACAGTAGCTGGGGAGACCTCAGCAGGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR TCA 90 bp TTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGGGCTTGTGGCTGGGGTaGTCCCAGGGGGCATTGCTC +
Preference number: 2 (lower is better)
Translates to: LQDPNHRTSGLHNTCGLRGLWLG*SQGALL
Trigger: GAGCAATGCCCCCTGGGATCACCCCAGCCACAAGCC...CCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR GCA 90 bp GCCCTCGAAGGGCTTGTGGCTGGGGTGATCCCAGGGGGCATTGCTCAAAGTGCAGGGAGTGTGCGAGGCTaGTGGGATGAGGGAGCTCAG +
Preference number: 2 (lower is better)
Translates to: ALEGLVAGVIPGGIAQSAGSVRG*WDEGAQ
Trigger: CTGAGCTCCCTCATCCCAGCAGCCTCGCACACTCCC...TGCACTTTGAGCAATGCCCCCTGGGATCACCCCAGCCACAAGCCCTTCGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR GCA 90 bp CAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGAGTGTGCGAGGCTaGTGGGATGAGGGAGCTCAG +
Preference number: 2 (lower is better)
Translates to: QEVAAGSGEFLFQGHQEGGSVRG*WDEGAQ
Trigger: CTGAGCTCCCTCATCCCAGCAGCCTCGCACACTCCC...TCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR CCA 90 bp GACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGAGTGTGCGAGGCTGCTaGGATGAGGGAGCTCAGGGG +
Preference number: 2 (lower is better)
Translates to: DPNHRTSGLHNTCGLRTPSVRGC*DEGAQG
Trigger: CCCCTGAGCTCCCTCATCCCAGCAGCCTCGCACACT...CGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR CCA 90 bp TTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGAGTGTGCGAGGCTGCTaGGATGAGGGAGCTCAGGGG +
Preference number: 2 (lower is better)
Translates to: LQDPNHRTSGLHNTCGLRSVRGC*DEGAQG
Trigger: CCCCTGAGCTCCCTCATCCCAGCAGCCTCGCACACT...CCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR CCA 90 bp CGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAGTGTGCGAGGCTGCTaGGATGAGGGAGCTCAGGGG +
Preference number: 2 (lower is better)
Translates to: RAEEAFLQDPNHRTSGLHSVRGC*DEGAQG
Trigger: CCCCTGAGCTCCCTCATCCCAGCAGCCTCGCACACT...GTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR CCA 90 bp GTGCCACAACCAGCTCGGAGCTGCCACTCTAACAGCAGAGTGGAGAGCTGGGGTATGGGGTGGCCTTCATaGGAGACCTGCAGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: VPQPARSCHSNSRVESWGMGWPS*ETCRAR
Trigger: CCTGGCCCTGCAGGTCTCCCATGAAGGCCACCCCAT...ACCCCAGCTCTCCACTCTGCTGTTAGAGTGGCAGCTCCGAGCTGGTTGTGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR GCA 90 bp GGCCAGAAAGACTTCCCAGGGAAGATGCTTGGCTCTCTGCTCCAAGGTGGGCCAGGGAGTGTGCGAGGCTaGTGGGATGAGGGAGCTCAG +
Preference number: 2 (lower is better)
Translates to: GQKDFPGKMLGSLLQGGPGSVRG*WDEGAQ
Trigger: CTGAGCTCCCTCATCCCAGCAGCCTCGCACACTCCC...TGGCCCACCTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGAAGTCTTTCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR CAA 90 bp CCAGGCTGGCCAGACTTGGCCAGAAAGACTTCCCAGGGAAGATGCTaGGCTCTCTGCTCCAAGGTGGGCCATGGTATAGGGCCCTCGAAG +
Preference number: 2 (lower is better)
Translates to: PGWPDLARKTSQGRC*ALCSKVGHGIGPSK
Trigger: CTTCGAGGGCCCTATACCATGGCCCACCTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGAAGTCTTTCTGGCCAAGTCTGGCCAGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR GCA 90 bp CCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCGATCCCAGGGGGCATTaGTCAAAGTGCACAGGAGGT +
Preference number: 2 (lower is better)
Translates to: PGLRRPSCRTPTTERVVFDPRGH*SKCTGG
Trigger: ACCTCCTGTGCACTTTGAGCAATGCCCCCTGGGATC...GAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR GCA 90 bp ATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGAGATGCTTGGCTCTCTaGTCCAAGGTGGGCCATGGT +
Preference number: 2 (lower is better)
Translates to: IAPGLRRPSCRTPTTERVRCLAL*SKVGHG
Trigger: ACCATGGCCCACCTTGGAGCAGAGAGCCAAGCATCT...CACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR CCA 90 bp GAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCAGGCTCCAAGGTGGGCCATaGTATAGGGCCCTCGAAGGG +
Preference number: 2 (lower is better)
Translates to: EMLHAHQTMGWPSWETCRLQGGP*YRALEG
Trigger: CCCTTCGAGGGCCCTATACCATGGCCCACCTTGGAG...CCTGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR CCA 90 bp CGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACCATCAGACCATGGGGTaGCCTTCATGGGAGACCTGC +
Preference number: 2 (lower is better)
Translates to: RAEEAFLQDPNHRTSGLHHQTMG*PSWETC
Trigger: GCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATG...GTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR CCA 90 bp TTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGCATCAGACCATGGGGTaGCCTTCATGGGAGACCTGC +
Preference number: 2 (lower is better)
Translates to: LQDPNHRTSGLHNTCGLRHQTMG*PSWETC
Trigger: GCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATG...CCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR CCA 90 bp GTGCCACAACCAGCTCGGAGCTGCCACTCTAACAGCAGAGTGGAGAGCTGGGGTCATCAGACCATGGGGTaGCCTTCATGGGAGACCTGC +
Preference number: 2 (lower is better)
Translates to: VPQPARSCHSNSRVESWGHQTMG*PSWETC
Trigger: GCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATG...ACCCCAGCTCTCCACTCTGCTGTTAGAGTGGCAGCTCCGAGCTGGTTGTGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR GCA 90 bp AGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCAGATGCTTGGCTCTCTaGTCCAAGGTGGGCCATGGT +
Preference number: 2 (lower is better)
Translates to: RTPTTERVVFTTPAACGLRCLAL*SKVGHG
Trigger: ACCATGGCCCACCTTGGAGCAGAGAGCCAAGCATCT...GAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR GCA 90 bp CCCCAATGCCCACATGGCGGCTCAGGCACCCTCCACTCCTCCCTGATGGGGTTACCAAGGAGTCTGAGATaGTTCATGCCCATCAGACCA +
Preference number: 2 (lower is better)
Translates to: PQCPHGGSGTLHSSLMGLPRSLR*FMPIRP
Trigger: TGGTCTGATGGGCATGAAGCATCTCAGACTCCTTGG...TAACCCCATCAGGGAGGAGTGGAGGGTGCCTGAGCCGCCATGTGGGCATTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215838.8
3UTR-3UTR CCA 90 bp AGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTAGTGTGCGAGGCTGCTaGGATGAGGGAGCTCAGGGG +
Preference number: 2 (lower is better)
Translates to: RRPSCRTPTTERVVFTTPSVRGC*DEGAQG
Trigger: CCCCTGAGCTCCCTCATCCCAGCAGCCTCGCACACT...AGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR CCA 90 bp AGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTATGGGGTGGCCTTCATaGGAGACCTGCAGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: RRPSCRTPTTERVVFTTPMGWPS*ETCRAR
Trigger: CCTGGCCCTGCAGGTCTCCCATGAAGGCCACCCCAT...AGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR CAA 90 bp GAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGTTTTTaGCCAAGGAGTCTGAGATGCTTCATGCCCATCAGACCATGGGGT +
Preference number: 2 (lower is better)
Translates to: ERVVFTTPAACGLRF*PRSLRCFMPIRPWG
Trigger: ACCCCATGGTCTGATGGGCATGAAGCATCTCAGACTCCTTGGCAAAAAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR TCA 90 bp GCTCAGTCAGTAGTCAATGTCATCACTGCTGGCATTCCCATCACTCCCCCAATGACTGAGCAGCCCTGCTaGGGTCTCCCCAGCTACTGT +
Preference number: 2 (lower is better)
Translates to: AQSVVNVITAGIPITPPMTEQPC*GLPSYC
Trigger: ACAGTAGCTGGGGAGACCTCAGCAGGGCTGCTCAGT...CATTGGGGGAGTGATGGGAATGCCAGCAGTGATGACATTGACTACTGACTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215838.8
3UTR-3UTR GCA 90 bp AGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTAGATGCTTGGCTCTCTaGTCCAAGGTGGGCCATGGT +
Preference number: 2 (lower is better)
Translates to: RRPSCRTPTTERVVFTTPRCLAL*SKVGHG
Trigger: ACCATGGCCCACCTTGGAGCAGAGAGCCAAGCATCT...AGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR GCA 90 bp CAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGTTTTTACTTCCCAGGGAAGATaGTTGGCTCTCTGCTCCAAG +
Preference number: 2 (lower is better)
Translates to: QPQNEWSSQHLRPADSVFTSQGR*LALCSK
Trigger: CTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGAAGT...AAAAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR CCA 72 bp GCTCGGAGCTGCCACTCTAACAGCAGAGTGGAGAGCTaGGGTCAGGGCCATAGCCCCCGGGCTGAGGAGGCC +
Preference number: 3 (lower is better)
Translates to: ARSCHSNSRVES*GQGHSPRAEEA
Trigger: GGCCTCCTCAGCCCGGGGGCTATGGCCCTGACCCCAGCTCTCCACTCTGCTGTTAGAGTGGCAGCTCCGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR CCA 72 bp ACTGCTGGCATTCCCATCACTCCCCCAATGCCCACATaGCGGCTCAGGCACCCTCCACTCCTCCCTGATGGG +
Preference number: 3 (lower is better)
Translates to: TAGIPITPPMPT*RLRHPPLLPDG
Trigger: CCCATCAGGGAGGAGTGGAGGGTGCCTGAGCCGCCATGTGGGCATTGGGGGAGTGATGGGAATGCCAGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215838.8
3UTR-3UTR CAA 90 bp AGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCCAGGCTGGCCAGACTaGGCCAGAAAGACTTCCCAG +
Preference number: 3 (lower is better)
Translates to: SPRAEEAFLQDPNHRTSGPGWPD*ARKTSQ
Trigger: CTGGGAAGTCTTTCTGGCCAAGTCTGGCCAGCCTGG...ACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR CAA 90 bp GCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGACCAGGCTGGCCAGACTaGGCCAGAAAGACTTCCCAG +
Preference number: 3 (lower is better)
Translates to: AIAPGLRRPSCRTPTTERPGWPD*ARKTSQ
Trigger: CTGGGAAGTCTTTCTGGCCAAGTCTGGCCAGCCTGG...TCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR GCA 72 bp GTCAGGGCCATAGCCCCCGGGCTGAGGAGGCCTTCTTaGAGGACCCCAACCACAGAACGAGTGGTCTTCACA +
Preference number: 3 (lower is better)
Translates to: VRAIAPGLRRPS*RTPTTERVVFT
Trigger: TGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGCCCTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR CCA 72 bp GGGAAGATGCTTGGCTCTCTGCTCCAAGGTGGGCCATaGTATAGGGCCCTCGAAGGGCTTGTGGCTGGGGTG +
Preference number: 3 (lower is better)
Translates to: GKMLGSLLQGGP*YRALEGLVAGV
Trigger: CACCCCAGCCACAAGCCCTTCGAGGGCCCTATACCATGGCCCACCTTGGAGCAGAGAGCCAAGCATCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR CCA 72 bp TGGGGTGGCCTTCATGGGAGACCTGCAGGGCCAGGCTaGCCAGACTTGGCCAGAAAGACTTCCCAGGGAAGA +
Preference number: 3 (lower is better)
Translates to: WGGLHGRPAGPG*PDLARKTSQGR
Trigger: TCTTCCCTGGGAAGTCTTTCTGGCCAAGTCTGGCCAGCCTGGCCCTGCAGGTCTCCCATGAAGGCCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR CAA 90 bp AGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCCAGGCTGGCCAGACTaGGCCAGAAAGACTTCCCAG +
Preference number: 3 (lower is better)
Translates to: RTPTTERVVFTTPAACGLPGWPD*ARKTSQ
Trigger: CTGGGAAGTCTTTCTGGCCAAGTCTGGCCAGCCTGG...GAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR-3UTR CAA 90 bp GTGCCACAACCAGCTCGGAGCTGCCACTCTAACAGCAGAGTGGAGAGCTGGGGTGCTGAGGAGGCCTTCTaGCAGGACCCCAACCACAGA +
Preference number: 3 (lower is better)
Translates to: VPQPARSCHSNSRVESWGAEEAF*QDPNHR
Trigger: TCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGC...ACCCCAGCTCTCCACTCTGCTGTTAGAGTGGCAGCTCCGAGCTGGTTGTGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR TCA 72 bp CATGGTATAGGGCCCTCGAAGGGCTTGTGGCTGGGGTaGTCCCAGGGGGCATTGCTCAAAGTGCACAGGAGG +
Preference number: 3 (lower is better)
Translates to: HGIGPSKGLWLG*SQGALLKVHRR
Trigger: CCTCCTGTGCACTTTGAGCAATGCCCCCTGGGATCACCCCAGCCACAAGCCCTTCGAGGGCCCTATACCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR GCA 72 bp GTCTCCCCAGCTACTGTGCCACAACCAGCTCGGAGCTaGCACTCTAACAGCAGAGTGGAGAGCTGGGGTCAG +
Preference number: 3 (lower is better)
Translates to: VSPATVPQPARS*HSNSRVESWGQ
Trigger: CTGACCCCAGCTCTCCACTCTGCTGTTAGAGTGGCAGCTCCGAGCTGGTTGTGGCACAGTAGCTGGGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR GCA 72 bp ATGTCATCACTGCTGGCATTCCCATCACTCCCCCAATaGCCACATGGCGGCTCAGGCACCCTCCACTCCTCC +
Preference number: 3 (lower is better)
Translates to: MSSLLAFPSLPQ*PHGGSGTLHSS
Trigger: GGAGGAGTGGAGGGTGCCTGAGCCGCCATGTGGGCATTGGGGGAGTGATGGGAATGCCAGCAGTGATGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215838.8
3UTR CCA 72 bp GGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTaGTCTTCACAACACCTGCGGCCTGCGGACTCCGTT +
Preference number: 3 (lower is better)
Translates to: GGLLAGPQPQNE*SSQHLRPADSV
Trigger: AACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR GCA 72 bp GCCAGAAAGACTTCCCAGGGAAGATGCTTGGCTCTCTaGTCCAAGGTGGGCCATGGTATAGGGCCCTCGAAG +
Preference number: 3 (lower is better)
Translates to: ARKTSQGRCLAL*SKVGHGIGPSK
Trigger: CTTCGAGGGCCCTATACCATGGCCCACCTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGAAGTCTTTCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR TCA 72 bp GGCCATCAATGCTTTAATTTTGTCAGAGGCAGGCACTaGGCAGCCCTGCTGAGGTCTCCCCAGCTACTGTGC +
Preference number: 3 (lower is better)
Translates to: GHQCFNFVRGRH*AALLRSPQLLC
Trigger: GCACAGTAGCTGGGGAGACCTCAGCAGGGCTGCTCAGTGCCTGCCTCTGACAAAATTAAAGCATTGATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215838.8
ENST00000407817.3
3UTR-3UTR CAA 90 bp GTCATAGTAGTGGGTGCTCAGTCAGTAGTCAATGTCATCACTGCTGGCATTCCCTCCCAGGGAAGATGCTaGGCTCTCTGCTCCAAGGTG +
Preference number: 3 (lower is better)
Translates to: VIVVGAQSVVNVITAGIPSQGRC*ALCSKV
Trigger: CACCTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGA...GGGAATGCCAGCAGTGATGACATTGACTACTGACTGAGCACCCACTACTATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS-3UTR CCA 90 bp GGGCCATGGTATAGGGCCCTCGAAGGGCTTGTGGCTGGGGTGATCCCAGGGGGCCCCCCAATGCCCACATaGCGGCTCAGGCACCCTCCA +
Preference number: 4 (lower is better)
Translates to: GPWYRALEGLVAGVIPGGPPMPT*RLRHPP
Trigger: TGGAGGGTGCCTGAGCCGCCATGTGGGCATTGGGGG...GCCCCCTGGGATCACCCCAGCCACAAGCCCTTCGAGGGCCCTATACCATGGCCC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS-3UTR CCA 90 bp GGGCCATGGTATAGGGCCCTCGAAGGGCTTGTGGCTGGGGTGATCCCAGGGGGCATGGGGTGGCCTTCATaGGAGACCTGCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GPWYRALEGLVAGVIPGGMGWPS*ETCRAR
Trigger: CCTGGCCCTGCAGGTCTCCCATGAAGGCCACCCCAT...GCCCCCTGGGATCACCCCAGCCACAAGCCCTTCGAGGGCCCTATACCATGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp TGGAGAGCTGGGGTCAGGGCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGCCCCCTTGTGGCCCCTaGCAAACTCACAGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: WRAGVRAIAPGLRRPSCRPPCGP*QTHSWL
Trigger: GAGCCAACTGTGAGTTTGTCAGGGGCCACAAGGGGG...CCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGCCCTGACCCCAGCTCTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR TCA 90 bp ACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGGCGAGGCTGCTGGGATaGGGGAGCTCAGGGGCTACC +
Preference number: 4 (lower is better)
Translates to: TGGGSRVRRVPVPGTSGGARLLG*GSSGAT
Trigger: GGTAGCCCCTGAGCTCCCTCATCCCAGCAGCCTCGC...CCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp AGAGCTGGGGTCAGGGCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCGGCCCATGGAAGGCTTaGCCTGGCAGTCACCGTCAT +
Preference number: 4 (lower is better)
Translates to: RAGVRAIAPGLRRPSCRTGPWKA*PGSHRH
Trigger: ATGACGGTGACTGCCAGGGCAAGCCTTCCATGGGCC...GGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGCCCTGACCCCAGCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp TGGAGAGCTGGGGTCAGGGCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGTGGCCCTCGGGGGTCTaGGCCTTCAAGATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: WRAGVRAIAPGLRRPSCRWPSGV*AFKISS
Trigger: AGAGGAGATCTTGAAGGCCCAGACCCCCGAGGGCCA...CCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGCCCTGACCCCAGCTCTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp GAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGCACCGTCATCCTCGCTaGAGGCAGACCCTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: EVAAGSGEFLFQGHQEGGHRHPR*RQTLGG
Trigger: GCCTCCTAGGGTCTGCCTTCAGCGAGGATGACGGTG...CCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp AGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCACCGTCATCCTCGCTaGAGGCAGACCCTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SPRAEEAFLQDPNHRTSGHRHPR*RQTLGG
Trigger: GCCTCCTAGGGTCTGCCTTCAGCGAGGATGACGGTG...ACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp TTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGGCGAGGCTGCTGGGATaGGGGAGCTCAGGGGCTACC +
Preference number: 4 (lower is better)
Translates to: LQDPNHRTSGLHNTCGLRARLLG*GSSGAT
Trigger: GGTAGCCCCTGAGCTCCCTCATCCCAGCAGCCTCGC...CCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp GACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGGGCTTGTGGCTGGGGTaGTCCCAGGGGGCATTGCTC +
Preference number: 4 (lower is better)
Translates to: DPNHRTSGLHNTCGLRTPGLWLG*SQGALL
Trigger: GAGCAATGCCCCCTGGGATCACCCCAGCCACAAGCC...CGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp CACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGGCTTGTGGCTGGGGTaGTCCCAGGGGGCATTGCTC +
Preference number: 4 (lower is better)
Translates to: HRRWQQGQASSCSRDIRRGLWLG*SQGALL
Trigger: GAGCAATGCCCCCTGGGATCACCCCAGCCACAAGCC...CCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp AGAGCTGGGGTCAGGGCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCTGCTGTTCCCAGTTCTaGCCCACGCATGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: RAGVRAIAPGLRRPSCRTCCSQF*PTHGGS
Trigger: ACTTCCCCCATGCGTGGGGCAGAACTGGGAACAGCA...GGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGCCCTGACCCCAGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GGGCCATGGTATAGGGCCCTCGAAGGGCTTGTGGCTGGGGTGATCCCAGGGGGCGGTCTTCACAACACCTaGGGCCTGCGGACTCCGTTT +
Preference number: 4 (lower is better)
Translates to: GPWYRALEGLVAGVIPGGGLHNT*GLRTPF
Trigger: AAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACC...GCCCCCTGGGATCACCCCAGCCACAAGCCCTTCGAGGGCCCTATACCATGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp AGAGCTGGGGTCAGGGCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCGGCCCACATAGATGCTaGGGTTCAAGTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RAGVRAIAPGLRRPSCRTGPHRC*GSSAPG
Trigger: CCCTGGAGCACTTGAACCCCAGCATCTATGTGGGCC...GGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGCCCTGACCCCAGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp TGGAGAGCTGGGGTCAGGGCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGTGGACCCGCTTCTGGTaGAGACACAGGGCCAGAATG +
Preference number: 4 (lower is better)
Translates to: WRAGVRAIAPGLRRPSCRWTRFW*RHRARM
Trigger: CATTCTGGCCCTGTGTCTCCACCAGAAGCGGGTCCA...CCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGCCCTGACCCCAGCTCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GGGCCATGGTATAGGGCCCTCGAAGGGCTTGTGGCTGGGGTGATCCCAGGGGGCTCCACCACGCTGTCATaGACCCGCTTCTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: GPWYRALEGLVAGVIPGGSTTLS*TRFWWR
Trigger: TCTCCACCAGAAGCGGGTCCATGACAGCGTGGTGGA...GCCCCCTGGGATCACCCCAGCCACAAGCCCTTCGAGGGCCCTATACCATGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CCCCAATGCCCACATGGCGGCTCAGGCACCCTCCACTCCTCCCTGATGGGGTTAAGCAGAGTGGAGAGCTaGGGTCAGGGCCATAGCCCC +
Preference number: 4 (lower is better)
Translates to: PQCPHGGSGTLHSSLMGLSRVES*GQGHSP
Trigger: GGGGCTATGGCCCTGACCCCAGCTCTCCACTCTGCT...TAACCCCATCAGGGAGGAGTGGAGGGTGCCTGAGCCGCCATGTGGGCATTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS-3UTR CCA 90 bp GCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAAGCAGAGTGGAGAGCTaGGGTCAGGGCCATAGCCCC +
Preference number: 4 (lower is better)
Translates to: AIAPGLRRPSCRTPTTERSRVES*GQGHSP
Trigger: GGGGCTATGGCCCTGACCCCAGCTCTCCACTCTGCT...TCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR CAA 72 bp GGTCAGGGCCATAGCCCCCGGGCTGAGGAGGCCTTCTaGCAGGACCCCAACCACAGAACGAGTGGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: GQGHSPRAEEAF*QDPNHRTSGLH
Trigger: GTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGCCCTGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp GGGCCATGGTATAGGGCCCTCGAAGGGCTTGTGGCTGGGGTGATCCCAGGGGGCGAACCATTTGAGCTGTaGGACCAGCCTGTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: GPWYRALEGLVAGVIPGGEPFEL*DQPVPL
Trigger: AAGGGGGACAGGCTGGTCTCACAGCTCAAATGGTTC...GCCCCCTGGGATCACCCCAGCCACAAGCCCTTCGAGGGCCCTATACCATGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR TCA 90 bp TGGAGAGCTGGGGTCAGGGCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGCCTCCAGGAACCATTTaGGCTGTGAGACCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: WRAGVRAIAPGLRRPSCRPPGTI*AVRPAC
Trigger: ACAGGCTGGTCTCACAGCTCAAATGGTTCCTGGAGG...CCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGCCCTGACCCCAGCTCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR TCA 90 bp GGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGTGGGGGTGGCCCTTGTaGTCATGCCCAATGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GGGSRVRRVPVPGTSGGRWGWPL*SCPMAL
Trigger: GAGAGCCATTGGGCATGATCACAAGGGCCACCCCCA...CCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR TCA 90 bp AGGGCTTGTGGCTGGGGTGATCCCAGGGGGCATTGCTCAAAGTGCACAGGAGGTGGCTTGTGGCTGGGGTaGTCCCAGGGGGCATTGCTC +
Preference number: 4 (lower is better)
Translates to: RACGWGDPRGHCSKCTGGGLWLG*SQGALL
Trigger: GAGCAATGCCCCCTGGGATCACCCCAGCCACAAGCC...ACCTCCTGTGCACTTTGAGCAATGCCCCCTGGGATCACCCCAGCCACAAGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp GAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGACTGAGCAGCCCTGCTaGGGTCTCCCCAGCTACTGT +
Preference number: 4 (lower is better)
Translates to: EVAAGSGEFLFQGHQEGGTEQPC*GLPSYC
Trigger: ACAGTAGCTGGGGAGACCTCAGCAGGGCTGCTCAGT...CCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp GCTCTCTGCTCCAAGGTGGGCCATGGTATAGGGCCCTCGAAGGGCTTGTGGCTGGTCAGAGGCAGGCACTaGGCAGCCCTGCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: ALCSKVGHGIGPSKGLWLVRGRH*AALLRS
Trigger: AGACCTCAGCAGGGCTGCTCAGTGCCTGCCTCTGAC...CAGCCACAAGCCCTTCGAGGGCCCTATACCATGGCCCACCTTGGAGCAGAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp TGGAGAGCTGGGGTCAGGGCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGGACACAGGGCCAGAATaGCCAGGCCATACTGGTAGT +
Preference number: 4 (lower is better)
Translates to: WRAGVRAIAPGLRRPSCRDTGPE*PGHTGS
Trigger: ACTACCAGTATGGCCTGGGCATTCTGGCCCTGTGTC...CCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGCCCTGACCCCAGCTCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGGGAGTGTGCGAGGCTaGTGGGATGAGGGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: HRRWQQGQASSCSRDIRRGSVRG*WDEGAQ
Trigger: CTGAGCTCCCTCATCCCAGCAGCCTCGCACACTCCC...CCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGTAGGGAGTGTGCGAGGCTaGTGGGATGAGGGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GGSRVRRVPVPGTSGGRVGSVRG*WDEGAQ
Trigger: CTGAGCTCCCTCATCCCAGCAGCCTCGCACACTCCC...TACCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp AGAGCTGGGGTCAGGGCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCGATCCCAGGGGGCATTaGTCAAAGTGCACAGGAGGT +
Preference number: 4 (lower is better)
Translates to: RAGVRAIAPGLRRPSCRTDPRGH*SKCTGG
Trigger: ACCTCCTGTGCACTTTGAGCAATGCCCCCTGGGATC...GGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGCCCTGACCCCAGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGTCCCAGCCTGCAGACTaGAGAGGCGTAGGCCCACAT +
Preference number: 4 (lower is better)
Translates to: EVAAGSGEFLFQGHQEGGSQPAD*RGVGPH
Trigger: ATGTGGGCCTACGCCTCTCCAGTCTGCAGGCTGGGA...CCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GCAGCCCTGCTGAGGTCTCCCCAGCTACTGTGCCACAACCAGCTCGGAGCTGCCGGACATCTTCCACGGTaGACCCGGCCAGAACAGAGA +
Preference number: 4 (lower is better)
Translates to: AALLRSPQLLCHNQLGAAGHLPR*TRPEQR
Trigger: TCTCTGTTCTGGCCGGGTCCACCGTGGAAGATGTCC...GGCAGCTCCGAGCTGGTTGTGGCACAGTAGCTGGGGAGACCTCAGCAGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp AGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTGCAACAGTGGGGTGTTaGGGTCTCGGAGAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SPRAEEAFLQDPNHRTSGATVGC*GLGEAA
Trigger: GGCAGCTTCTCCGAGACCCCAACACCCCACTGTTGC...ACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCAGGGCCAGGAGTGTGCGAGGCTGCTaGGATGAGGGAGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LHAHQTMGWPSWETCRARSVRGC*DEGAQG
Trigger: CCCCTGAGCTCCCTCATCCCAGCAGCCTCGCACACT...CCTGGCCCTGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCAGGGCCAGGATGGGGTGGCCTTCATaGGAGACCTGCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LHAHQTMGWPSWETCRARMGWPS*ETCRAR
Trigger: CCTGGCCCTGCAGGTCTCCCATGAAGGCCACCCCAT...CCTGGCCCTGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp GAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGAGCGCTTCAGACAGGTaGATGCCAAGCCTGCCATGG +
Preference number: 4 (lower is better)
Translates to: EVAAGSGEFLFQGHQEGGSASDR*MPSLPW
Trigger: CCATGGCAGGCTTGGCATTCACCTGTCTGAAGCGCT...CCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp CCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGTTTTGCGAGGCTGCTGGGATaGGGGAGCTCAGGGGCTACC +
Preference number: 4 (lower is better)
Translates to: PTTERVVFTTPAACGLRFARLLG*GSSGAT
Trigger: GGTAGCCCCTGAGCTCCCTCATCCCAGCAGCCTCGC...AAAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp GGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGTAACTGAGCAGCCCTGCTaGGGTCTCCCCAGCTACTGT +
Preference number: 4 (lower is better)
Translates to: GGSRVRRVPVPGTSGGRVTEQPC*GLPSYC
Trigger: ACAGTAGCTGGGGAGACCTCAGCAGGGCTGCTCAGT...TACCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp AGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGTACTGAGCAGCCCTGCTaGGGTCTCCCCAGCTACTGT +
Preference number: 4 (lower is better)
Translates to: RWQQGQASSCSRDIRREGTEQPC*GLPSYC
Trigger: ACAGTAGCTGGGGAGACCTCAGCAGGGCTGCTCAGT...ACCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp CGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACGTCAGAGGCAGGCACTaGGCAGCCCTGCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: RAEEAFLQDPNHRTSGLHVRGRH*AALLRS
Trigger: AGACCTCAGCAGGGCTGCTCAGTGCCTGCCTCTGAC...GTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAATGCTGGGGTTCAAGTaGTCCAGGGAAAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: AIAPGLRRPSCRTPTTERMLGFK*SRESRS
Trigger: GGACCGGCTTTCCCTGGAGCACTTGAACCCCAGCAT...TCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGATGCTGGGGTTCAAGTaGTCCAGGGAAAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: GGGSRVRRVPVPGTSGGRMLGFK*SRESRS
Trigger: GGACCGGCTTTCCCTGGAGCACTTGAACCCCAGCAT...CCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCAGGGCCAGGGGCCCATGGAAGGCTTaGCCTGGCAGTCACCGTCAT +
Preference number: 4 (lower is better)
Translates to: LHAHQTMGWPSWETCRARGPWKA*PGSHRH
Trigger: ATGACGGTGACTGCCAGGGCAAGCCTTCCATGGGCC...CCTGGCCCTGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGTGCTGTTCCCAGTTCTaGCCCACGCATGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GGGSRVRRVPVPGTSGGRCCSQF*PTHGGS
Trigger: ACTTCCCCCATGCGTGGGGCAGAACTGGGAACAGCA...CCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp AGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCCTCGCCTTGAGACATaGTGTTCCCAGTTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SPRAEEAFLQDPNHRTSGPRLET*CSQFCP
Trigger: GGGGCAGAACTGGGAACAGCATGTCTCAAGGCGAGG...ACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GCTCAAAGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGAGGGAGTGTGCGAGGCTaGTGGGATGAGGGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: AQSAQEVAAGSGEFLFQGGSVRG*WDEGAQ
Trigger: CTGAGCTCCCTCATCCCAGCAGCCTCGCACACTCCC...TCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGTATCTCCTGACCACAGCTaGTCACCGCTCCGAGAGACG +
Preference number: 4 (lower is better)
Translates to: GGSRVRRVPVPGTSGGRVSPDHS*SPLRET
Trigger: CGTCTCTCGGAGCGGTGACCAGCTGTGGTCAGGAGA...TACCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp ACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGTCTCCTGACCACAGCTaGTCACCGCTCCGAGAGACG +
Preference number: 4 (lower is better)
Translates to: TGGGSRVRRVPVPGTSGGSPDHS*SPLRET
Trigger: CGTCTCTCGGAGCGGTGACCAGCTGTGGTCAGGAGA...CCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGTCTCCTGACCACAGCTaGTCACCGCTCCGAGAGACG +
Preference number: 4 (lower is better)
Translates to: HRRWQQGQASSCSRDIRRSPDHS*SPLRET
Trigger: CGTCTCTCGGAGCGGTGACCAGCTGTGGTCAGGAGA...CCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGTATCCCAGCCTGCAGACTaGAGAGGCGTAGGCCCACAT +
Preference number: 4 (lower is better)
Translates to: GGSRVRRVPVPGTSGGRVSQPAD*RGVGPH
Trigger: ATGTGGGCCTACGCCTCTCCAGTCTGCAGGCTGGGA...TACCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp AGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTTGGACCCGCTTCTGGTaGAGACACAGGGCCAGAATG +
Preference number: 4 (lower is better)
Translates to: SPRAEEAFLQDPNHRTSGWTRFW*RHRARM
Trigger: CATTCTGGCCCTGTGTCTCCACCAGAAGCGGGTCCA...ACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGTGGACCCGCTTCTGGTaGAGACACAGGGCCAGAATG +
Preference number: 4 (lower is better)
Translates to: EVAAGSGEFLFQGHQEGGWTRFW*RHRARM
Trigger: CATTCTGGCCCTGTGTCTCCACCAGAAGCGGGTCCA...CCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGTCATGGACCCGCTTCTaGTGGAGACACAGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: GGGSRVRRVPVPGTSGGRSWTRF*WRHRAR
Trigger: TCTGGCCCTGTGTCTCCACCAGAAGCGGGTCCATGA...CCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GCCCTCGAAGGGCTTGTGGCTGGGGTGATCCCAGGGGGCATTGCTCAAAGTGCATGGCCCTCGGGGGTCTaGGCCTTCAAGATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: ALEGLVAGVIPGGIAQSAWPSGV*AFKISS
Trigger: AGAGGAGATCTTGAAGGCCCAGACCCCCGAGGGCCA...TGCACTTTGAGCAATGCCCCCTGGGATCACCCCAGCCACAAGCCCTTCGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp ATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGTGGCCCTCGGGGGTCTaGGCCTTCAAGATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: IAPGLRRPSCRTPTTERVWPSGV*AFKISS
Trigger: AGAGGAGATCTTGAAGGCCCAGACCCCCGAGGGCCA...CACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGACTCCATCCTGCAGACTaGCCAGCAAAGCAACCCTCG +
Preference number: 4 (lower is better)
Translates to: AIAPGLRRPSCRTPTTERLHPAD*PAKQPS
Trigger: CGAGGGTTGCTTTGCTGGCCAGTCTGCAGGATGGAG...TCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp AGAGCTGGGGTCAGGGCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCTTGGGTCTGAGGAATaGTCTCAGCAGCTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: RAGVRAIAPGLRRPSCRTLGSEE*SQQLVP
Trigger: TGGAACCAGCTGCTGAGACCATTCCTCAGACCCAAG...GGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGCCCTGACCCCAGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp ATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGCAACAGTGGGGTGTTaGGGTCTCGGAGAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: IAPGLRRPSCRTPTTERVATVGC*GLGEAA
Trigger: GGCAGCTTCTCCGAGACCCCAACACCCCACTGTTGC...CACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GTGCCACAACCAGCTCGGAGCTGCCACTCTAACAGCAGAGTGGAGAGCTGGGGTAGTGTGCGAGGCTGCTaGGATGAGGGAGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: VPQPARSCHSNSRVESWGSVRGC*DEGAQG
Trigger: CCCCTGAGCTCCCTCATCCCAGCAGCCTCGCACACT...ACCCCAGCTCTCCACTCTGCTGTTAGAGTGGCAGCTCCGAGCTGGTTGTGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GCCCTCGAAGGGCTTGTGGCTGGGGTGATCCCAGGGGGCATTGCTCAAAGTGCACTCCAAGGTGGGCCATaGTATAGGGCCCTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: ALEGLVAGVIPGGIAQSALQGGP*YRALEG
Trigger: CCCTTCGAGGGCCCTATACCATGGCCCACCTTGGAG...TGCACTTTGAGCAATGCCCCCTGGGATCACCCCAGCCACAAGCCCTTCGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp AGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGTCTCCAAGGTGGGCCATaGTATAGGGCCCTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: RWQQGQASSCSRDIRREGLQGGP*YRALEG
Trigger: CCCTTCGAGGGCCCTATACCATGGCCCACCTTGGAG...ACCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp TTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGATGGGGTGGCCTTCATaGGAGACCTGCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LQDPNHRTSGLHNTCGLRMGWPS*ETCRAR
Trigger: CCTGGCCCTGCAGGTCTCCCATGAAGGCCACCCCAT...CCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGACATCAGACCATGGGGTaGCCTTCATGGGAGACCTGC +
Preference number: 4 (lower is better)
Translates to: AIAPGLRRPSCRTPTTERHQTMG*PSWETC
Trigger: GCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATG...TCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp TGGAGAGCTGGGGTCAGGGCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGCAACCACAGAACGAGTaGTCTTCACAACACCTGCGG +
Preference number: 4 (lower is better)
Translates to: WRAGVRAIAPGLRRPSCRQPQNE*SSQHLR
Trigger: CCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTG...CCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGCCCTGACCCCAGCTCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GCTCAAAGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGAAGCAGAGTGGAGAGCTaGGGTCAGGGCCATAGCCCC +
Preference number: 4 (lower is better)
Translates to: AQSAQEVAAGSGEFLFQGSRVES*GQGHSP
Trigger: GGGGCTATGGCCCTGACCCCAGCTCTCCACTCTGCT...TCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp TCAAAGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACACACCGTCATCCTCGCTaGAGGCAGACCCTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SKCTGGGSRVRRVPVPGTHRHPR*RQTLGG
Trigger: GCCTCCTAGGGTCTGCCTTCAGCGAGGATGACGGTG...TGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp GCCCTCGAAGGGCTTGTGGCTGGGGTGATCCCAGGGGGCATTGCTCAAAGTGCAACTCACAGTTGGCTCTaGGAGCGAGCAGGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: ALEGLVAGVIPGGIAQSATHSWL*ERAGRG
Trigger: CCCTCTACCTGCTCGCTCTCAGAGCCAACTGTGAGT...TGCACTTTGAGCAATGCCCCCTGGGATCACCCCAGCCACAAGCCCTTCGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR TCA 90 bp CAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAAGCGCTTCAGACAGGTaGATGCCAAGCCTGCCATGG +
Preference number: 4 (lower is better)
Translates to: QEVAAGSGEFLFQGHQEGSASDR*MPSLPW
Trigger: CCATGGCAGGCTTGGCATTCACCTGTCTGAAGCGCT...TCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp AGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTGTCTCCGACCAGGGTTaGAGTTTGAGCGCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: SPRAEEAFLQDPNHRTSGVSDQG*SLSASD
Trigger: GTCTGAAGCGCTCAAACTTCAACCCTGGTCGGAGAC...ACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp GGCCAGAAAGACTTCCCAGGGAAGATGCTTGGCTCTCTGCTCCAAGGTGGGCCAGTCAGAGGCAGGCACTaGGCAGCCCTGCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: GQKDFPGKMLGSLLQGGPVRGRH*AALLRS
Trigger: AGACCTCAGCAGGGCTGCTCAGTGCCTGCCTCTGAC...TGGCCCACCTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGAAGTCTTTCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp GCAGCCCTGCTGAGGTCTCCCCAGCTACTGTGCCACAACCAGCTCGGAGCTGCCATTGAGGCTGCCTGGTaGACTTCCTCCATGCAGATC +
Preference number: 4 (lower is better)
Translates to: AALLRSPQLLCHNQLGAAIEAAW*TSSMQI
Trigger: GATCTGCATGGAGGAAGTTCACCAGGCAGCCTCAAT...GGCAGCTCCGAGCTGGTTGTGGCACAGTAGCTGGGGAGACCTCAGCAGGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450638.5
CDS-3UTR GCA 90 bp AGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGAGGAAGGCCCCAAGGTaGCTCATGGCAGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SAQEVAAGSGEFLFQGHQRKAPR*LMAAAG
Trigger: ACCTGCTGCTGCCATGAGGCACCTTGGGGCCTTCCT...CTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAGGAAGGCCCCAAGGTaGCTCATGGCAGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RAEEAFLQDPNHRTSGLHRKAPR*LMAAAG
Trigger: ACCTGCTGCTGCCATGAGGCACCTTGGGGCCTTCCT...GTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAATGCTGGGGTTCAAGTaGTCCAGGGAAAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: QEVAAGSGEFLFQGHQEGMLGFK*SRESRS
Trigger: GGACCGGCTTTCCCTGGAGCACTTGAACCCCAGCAT...TCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp TTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGGGCCCATGGAAGGCTTaGCCTGGCAGTCACCGTCAT +
Preference number: 4 (lower is better)
Translates to: LQDPNHRTSGLHNTCGLRGPWKA*PGSHRH
Trigger: ATGACGGTGACTGCCAGGGCAAGCCTTCCATGGGCC...CCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACGGCCCATGGAAGGCTTaGCCTGGCAGTCACCGTCAT +
Preference number: 4 (lower is better)
Translates to: RAEEAFLQDPNHRTSGLHGPWKA*PGSHRH
Trigger: ATGACGGTGACTGCCAGGGCAAGCCTTCCATGGGCC...GTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CCCCAATGCCCACATGGCGGCTCAGGCACCCTCCACTCCTCCCTGATGGGGTTAGACACAGGGCCAGAATaGCCAGGCCATACTGGTAGT +
Preference number: 4 (lower is better)
Translates to: PQCPHGGSGTLHSSLMGLDTGPE*PGHTGS
Trigger: ACTACCAGTATGGCCTGGGCATTCTGGCCCTGTGTC...TAACCCCATCAGGGAGGAGTGGAGGGTGCCTGAGCCGCCATGTGGGCATTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS-3UTR GCA 90 bp GGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGCAAGCCTGCCATGGCTaGTGTGTCCACAGAATGGTG +
Preference number: 4 (lower is better)
Translates to: GGGSRVRRVPVPGTSGGRQACHG*CVHRMV
Trigger: CACCATTCTGTGGACACAGCAGCCATGGCAGGCTTG...CCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GCTCTCTGCTCCAAGGTGGGCCATGGTATAGGGCCCTCGAAGGGCTTGTGGCTGTGCTGTTCCCAGTTCTaGCCCACGCATGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: ALCSKVGHGIGPSKGLWLCCSQF*PTHGGS
Trigger: ACTTCCCCCATGCGTGGGGCAGAACTGGGAACAGCA...CAGCCACAAGCCCTTCGAGGGCCCTATACCATGGCCCACCTTGGAGCAGAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCAGGGCCAGGCCTCGCCTTGAGACATaGTGTTCCCAGTTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LHAHQTMGWPSWETCRARPRLET*CSQFCP
Trigger: GGGGCAGAACTGGGAACAGCATGTCTCAAGGCGAGG...CCTGGCCCTGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp AGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGTCCTCGCCTTGAGACATaGTGTTCCCAGTTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: RWQQGQASSCSRDIRREGPRLET*CSQFCP
Trigger: GGGGCAGAACTGGGAACAGCATGTCTCAAGGCGAGG...ACCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GGGCCATGGTATAGGGCCCTCGAAGGGCTTGTGGCTGGGGTGATCCCAGGGGGCCAACATGACTCGTGGTaGCAGACAGTCTGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: GPWYRALEGLVAGVIPGGQHDSW*QTVWED
Trigger: ATCTTCCCAGACTGTCTGGCACCACGAGTCATGTTG...GCCCCCTGGGATCACCCCAGCCACAAGCCCTTCGAGGGCCCTATACCATGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGGGTCTCGGAGAAGCTaGCAGAACTCCCTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: HRRWQQGQASSCSRDIRRGSRRS*QNSLSP
Trigger: CGGAGAAAGGGAGTTCTGGCAGCTTCTCCGAGACCC...CCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGGGGTCTCGGAGAAGCTaGCAGAACTCCCTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: DPNHRTSGLHNTCGLRTPGSRRS*QNSLSP
Trigger: CGGAGAAAGGGAGTTCTGGCAGCTTCTCCGAGACCC...CGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp ACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGGGGTCTCGGAGAAGCTaGCAGAACTCCCTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: TGGGSRVRRVPVPGTSGGGSRRS*QNSLSP
Trigger: CGGAGAAAGGGAGTTCTGGCAGCTTCTCCGAGACCC...CCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGAGATGCTTGGCTCTCTaGTCCAAGGTGGGCCATGGT +
Preference number: 4 (lower is better)
Translates to: EVAAGSGEFLFQGHQEGGRCLAL*SKVGHG
Trigger: ACCATGGCCCACCTTGGAGCAGAGAGCCAAGCATCT...CCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp ACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGGGTCTTCACAACACCTaGGGCCTGCGGACTCCGTTT +
Preference number: 4 (lower is better)
Translates to: TGGGSRVRRVPVPGTSGGGLHNT*GLRTPF
Trigger: AAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACC...CCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp AGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGTGGTCTTCACAACACCTaGGGCCTGCGGACTCCGTTT +
Preference number: 4 (lower is better)
Translates to: RWQQGQASSCSRDIRREGGLHNT*GLRTPF
Trigger: AAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACC...ACCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGACTGAGGAGGCCTTCTTaGAGGACCCCAACCACAGAA +
Preference number: 4 (lower is better)
Translates to: AIAPGLRRPSCRTPTTERLRRPS*RTPTTE
Trigger: TTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAG...TCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGCTGAGGAGGCCTTCTTaGAGGACCCCAACCACAGAA +
Preference number: 4 (lower is better)
Translates to: GGGSRVRRVPVPGTSGGRLRRPS*RTPTTE
Trigger: TTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAG...CCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp AGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGTTCTCCCCAGCTACTGTaGCACAACCAGCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: RWQQGQASSCSRDIRREGSPQLL*HNQLGA
Trigger: AGCTCCGAGCTGGTTGTGGCACAGTAGCTGGGGAGA...ACCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp AGGGCTTGTGGCTGGGGTGATCCCAGGGGGCATTGCTCAAAGTGCACAGGAGGTTCTCCTGACCACAGCTaGTCACCGCTCCGAGAGACG +
Preference number: 4 (lower is better)
Translates to: RACGWGDPRGHCSKCTGGSPDHS*SPLRET
Trigger: CGTCTCTCGGAGCGGTGACCAGCTGTGGTCAGGAGA...ACCTCCTGTGCACTTTGAGCAATGCCCCCTGGGATCACCCCAGCCACAAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp TGGAGAGCTGGGGTCAGGGCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGCAAGGTAAGAGGTGCTaGCCCAACTTCTCTACCAGA +
Preference number: 4 (lower is better)
Translates to: WRAGVRAIAPGLRRPSCRQGKRC*PNFSTR
Trigger: TCTGGTAGAGAAGTTGGGCCAGCACCTCTTACCTTG...CCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGCCCTGACCCCAGCTCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp AGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGTCCCAGCCTGCAGACTaGAGAGGCGTAGGCCCACAT +
Preference number: 4 (lower is better)
Translates to: SAQEVAAGSGEFLFQGHQSQPAD*RGVGPH
Trigger: ATGTGGGCCTACGCCTCTCCAGTCTGCAGGCTGGGA...CTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp ACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGGGTAGAGGTCTTCCTTaGTCCCAGCCTGCAGACTGG +
Preference number: 4 (lower is better)
Translates to: TGGGSRVRRVPVPGTSGGGRGLP*SQPADW
Trigger: CCAGTCTGCAGGCTGGGACCAAGGAAGACCTCTACC...CCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCATGGAAGGCTTGCCCTaGCAGTCACCGTCATCCTCG +
Preference number: 4 (lower is better)
Translates to: PGLRRPSCRTPTTERVVFMEGLP*QSPSSS
Trigger: CGAGGATGACGGTGACTGCCAGGGCAAGCCTTCCAT...GAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGATGGAAGGCTTGCCCTaGCAGTCACCGTCATCCTCG +
Preference number: 4 (lower is better)
Translates to: DPNHRTSGLHNTCGLRTPMEGLP*QSPSSS
Trigger: CGAGGATGACGGTGACTGCCAGGGCAAGCCTTCCAT...CGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGTAAGCCTGTCCCCCTTGTaGCCCCTGACAAACTCACAG +
Preference number: 4 (lower is better)
Translates to: GGSRVRRVPVPGTSGGRVSLSPL*PLTNSQ
Trigger: CTGTGAGTTTGTCAGGGGCCACAAGGGGGACAGGCT...TACCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR CCA 90 bp CCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCTCATGGACCCGCTTCTaGTGGAGACACAGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: PGLRRPSCRTPTTERVVFSWTRF*WRHRAR
Trigger: TCTGGCCCTGTGTCTCCACCAGAAGCGGGTCCATGA...GAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGCTCCATCCTGCAGACTaGCCAGCAAAGCAACCCTCG +
Preference number: 4 (lower is better)
Translates to: HRRWQQGQASSCSRDIRRLHPAD*PAKQPS
Trigger: CGAGGGTTGCTTTGCTGGCCAGTCTGCAGGATGGAG...CCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGCTCCATCCTGCAGACTaGCCAGCAAAGCAACCCTCG +
Preference number: 4 (lower is better)
Translates to: DPNHRTSGLHNTCGLRTPLHPAD*PAKQPS
Trigger: CGAGGGTTGCTTTGCTGGCCAGTCTGCAGGATGGAG...CGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCGGACATCTTCCACGGTaGACCCGGCCAGAACAGAGA +
Preference number: 4 (lower is better)
Translates to: PGLRRPSCRTPTTERVVFGHLPR*TRPEQR
Trigger: TCTCTGTTCTGGCCGGGTCCACCGTGGAAGATGTCC...GAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp ACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGGGACATCTTCCACGGTaGACCCGGCCAGAACAGAGA +
Preference number: 4 (lower is better)
Translates to: TGGGSRVRRVPVPGTSGGGHLPR*TRPEQR
Trigger: TCTCTGTTCTGGCCGGGTCCACCGTGGAAGATGTCC...CCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGGGACATCTTCCACGGTaGACCCGGCCAGAACAGAGA +
Preference number: 4 (lower is better)
Translates to: DPNHRTSGLHNTCGLRTPGHLPR*TRPEQR
Trigger: TCTCTGTTCTGGCCGGGTCCACCGTGGAAGATGTCC...CGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCAGGGCCAGGAAAGTGCACAGGAGGTaGCAGCAGGGTCAGGCGAGT +
Preference number: 4 (lower is better)
Translates to: LHAHQTMGWPSWETCRARKVHRR*QQGQAS
Trigger: ACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTT...CCTGGCCCTGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp AGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCTCCAAGGTGGGCCATaGTATAGGGCCCTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: RTPTTERVVFTTPAACGLLQGGP*YRALEG
Trigger: CCCTTCGAGGGCCCTATACCATGGCCCACCTTGGAG...GAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp ATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGCATCAGACCATGGGGTaGCCTTCATGGGAGACCTGC +
Preference number: 4 (lower is better)
Translates to: IAPGLRRPSCRTPTTERVHQTMG*PSWETC
Trigger: GCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATG...CACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGCATCAGACCATGGGGTaGCCTTCATGGGAGACCTGC +
Preference number: 4 (lower is better)
Translates to: DPNHRTSGLHNTCGLRTPHQTMG*PSWETC
Trigger: GCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATG...CGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GCAGCCCTGCTGAGGTCTCCCCAGCTACTGTGCCACAACCAGCTCGGAGCTGCCCAACCACAGAACGAGTaGTCTTCACAACACCTGCGG +
Preference number: 4 (lower is better)
Translates to: AALLRSPQLLCHNQLGAAQPQNE*SSQHLR
Trigger: CCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTG...GGCAGCTCCGAGCTGGTTGTGGCACAGTAGCTGGGGAGACCTCAGCAGGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp TTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCACAGTTGGCTCTaGGAGCGAGCAGGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: LQDPNHRTSGLHNTCGLRTHSWL*ERAGRG
Trigger: CCCTCTACCTGCTCGCTCTCAGAGCCAACTGTGAGT...CCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR TCA 90 bp CGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACACTCACAGTTGGCTCTaGGAGCGAGCAGGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: RAEEAFLQDPNHRTSGLHTHSWL*ERAGRG
Trigger: CCCTCTACCTGCTCGCTCTCAGAGCCAACTGTGAGT...GTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR TCA 90 bp GGCCAGAAAGACTTCCCAGGGAAGATGCTTGGCTCTCTGCTCCAAGGTGGGCCACCCCCTTGTGGCCCCTaGCAAACTCACAGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: GQKDFPGKMLGSLLQGGPPPCGP*QTHSWL
Trigger: GAGCCAACTGTGAGTTTGTCAGGGGCCACAAGGGGG...TGGCCCACCTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGAAGTCTTTCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR TCA 90 bp CTCCAAGGTGGGCCATGGTATAGGGCCCTCGAAGGGCTTGTGGCTGGGGTGATCGAACCATTTGAGCTGTaGGACCAGCCTGTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: LQGGPWYRALEGLVAGVIEPFEL*DQPVPL
Trigger: AAGGGGGACAGGCTGGTCTCACAGCTCAAATGGTTC...GATCACCCCAGCCACAAGCCCTTCGAGGGCCCTATACCATGGCCCACCTTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR TCA 90 bp CCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCGAACCATTTGAGCTGTaGGACCAGCCTGTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: PGLRRPSCRTPTTERVVFEPFEL*DQPVPL
Trigger: AAGGGGGACAGGCTGGTCTCACAGCTCAAATGGTTC...GAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR TCA 90 bp CCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCCCTCCAGGAACCATTTaGGCTGTGAGACCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: PGLRRPSCRTPTTERVVFPPGTI*AVRPAC
Trigger: ACAGGCTGGTCTCACAGCTCAAATGGTTCCTGGAGG...GAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR TCA 90 bp ATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGCCTCCAGGAACCATTTaGGCTGTGAGACCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: IAPGLRRPSCRTPTTERVPPGTI*AVRPAC
Trigger: ACAGGCTGGTCTCACAGCTCAAATGGTTCCTGGAGG...CACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR TCA 90 bp CACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGTCTCCGACCAGGGTTaGAGTTTGAGCGCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: HRRWQQGQASSCSRDIRRVSDQG*SLSASD
Trigger: GTCTGAAGCGCTCAAACTTCAACCCTGGTCGGAGAC...CCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp GAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGGCAGCTGGGAAATCATaGGAGCATTCTGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: EVAAGSGEFLFQGHQEGGAAGKS*EHSGRL
Trigger: GAGCCTTCCAGAATGCTCTCATGATTTCCCAGCTGC...CCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp GGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGCAGCTGGGAAATCATaGGAGCATTCTGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: GGGSRVRRVPVPGTSGGRAAGKS*EHSGRL
Trigger: GAGCCTTCCAGAATGCTCTCATGATTTCCCAGCTGC...CCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp TCAAAGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACACATGCCAGTTGGCTCTaGGAGCGAGCAGGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: SKCTGGGSRVRRVPVPGTHASWL*ERAGRG
Trigger: CCCTCTACCTGCTCGCTCTCAGAGCCAACTGGCATG...TGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407817.3
CDS-3UTR GCA 90 bp AGAGCTGGGGTCAGGGCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCTGATTAATCCTCCATaGCTGCAATGCACGGCTAAG +
Preference number: 4 (lower is better)
Translates to: RAGVRAIAPGLRRPSCRTLINPP*LQCTAK
Trigger: CTTAGCCGTGCATTGCAGGCATGGAGGATTAATCAG...GGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGCCCTGACCCCAGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR GCA 90 bp TCAAAGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACAAGGAAGGCCCCAAGGTaGCTCATGGCAGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SKCTGGGSRVRRVPVPGTRKAPR*LMAAAG
Trigger: ACCTGCTGCTGCCATGAGGCACCTTGGGGCCTTCCT...TGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GGCCAGAAAGACTTCCCAGGGAAGATGCTTGGCTCTCTGCTCCAAGGTGGGCCAAGGAAGGCCCCAAGGTaGCTCATGGCAGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GQKDFPGKMLGSLLQGGPRKAPR*LMAAAG
Trigger: ACCTGCTGCTGCCATGAGGCACCTTGGGGCCTTCCT...TGGCCCACCTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGAAGTCTTTCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp TTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGATGCTGGGGTTCAAGTaGTCCAGGGAAAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: LQDPNHRTSGLHNTCGLRMLGFK*SRESRS
Trigger: GGACCGGCTTTCCCTGGAGCACTTGAACCCCAGCAT...CCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp AGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTGTAGGCCCACATAGATaGTGGGGTTCAAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SPRAEEAFLQDPNHRTSGVGPHR*WGSSAP
Trigger: TGGAGCACTTGAACCCCAGCATCTATGTGGGCCTAC...ACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGCTTCAGACAGGTGAATaGCAAGCCTGCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: DPNHRTSGLHNTCGLRTPLQTGE*QACHGC
Trigger: GCAGCCATGGCAGGCTTGGCATTCACCTGTCTGAAG...CGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp AGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGTCTTCAGACAGGTGAATaGCAAGCCTGCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: RWQQGQASSCSRDIRREGLQTGE*QACHGC
Trigger: GCAGCCATGGCAGGCTTGGCATTCACCTGTCTGAAG...ACCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACCCTCGCCTTGAGACATaGTGTTCCCAGTTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: RAEEAFLQDPNHRTSGLHPRLET*CSQFCP
Trigger: GGGGCAGAACTGGGAACAGCATGTCTCAAGGCGAGG...GTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GCTCAAAGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGAGGGTCTCGGAGAAGCTaGCAGAACTCCCTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: AQSAQEVAAGSGEFLFQGGSRRS*QNSLSP
Trigger: CGGAGAAAGGGAGTTCTGGCAGCTTCTCCGAGACCC...TCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGGAGTGTGCGAGGCTaGTGGGATGAGGGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: EAFLQDPNHRTSGLHNTCGSVRG*WDEGAQ
Trigger: CTGAGCTCCCTCATCCCAGCAGCCTCGCACACTCCC...GCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGATCCCAGGGGGCATTaGTCAAAGTGCACAGGAGGT +
Preference number: 4 (lower is better)
Translates to: QEVAAGSGEFLFQGHQEGDPRGH*SKCTGG
Trigger: ACCTCCTGTGCACTTTGAGCAATGCCCCCTGGGATC...TCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GCCCTCGAAGGGCTTGTGGCTGGGGTGATCCCAGGGGGCATTGCTCAAAGTGCAGATCCCAGGGGGCATTaGTCAAAGTGCACAGGAGGT +
Preference number: 4 (lower is better)
Translates to: ALEGLVAGVIPGGIAQSADPRGH*SKCTGG
Trigger: ACCTCCTGTGCACTTTGAGCAATGCCCCCTGGGATC...TGCACTTTGAGCAATGCCCCCTGGGATCACCCCAGCCACAAGCCCTTCGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp ACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGATGCTTGGCTCTCTaGTCCAAGGTGGGCCATGGT +
Preference number: 4 (lower is better)
Translates to: TGGGSRVRRVPVPGTSGGRCLAL*SKVGHG
Trigger: ACCATGGCCCACCTTGGAGCAGAGAGCCAAGCATCT...CCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGACTTCCCAGGGAAGATaGTTGGCTCTCTGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: GGGSRVRRVPVPGTSGGRTSQGR*LALCSK
Trigger: CTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGAAGT...CCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GTGCCACAACCAGCTCGGAGCTGCCACTCTAACAGCAGAGTGGAGAGCTGGGGTTCTCCCCAGCTACTGTaGCACAACCAGCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: VPQPARSCHSNSRVESWGSPQLL*HNQLGA
Trigger: AGCTCCGAGCTGGTTGTGGCACAGTAGCTGGGGAGA...ACCCCAGCTCTCCACTCTGCTGTTAGAGTGGCAGCTCCGAGCTGGTTGTGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CCAAGGAGTCTGAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGCCATCACTCCCCCAATaGCCACATGGCGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: PRSLRCFMPIRPWGGLHGPSLPQ*PHGGSG
Trigger: GCCTGAGCCGCCATGTGGGCATTGGGGGAGTGATGG...CCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTCAGACTCCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS-3UTR GCA 90 bp CACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGCCTCCATGCCTGCAATaGACGGCTAAGTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: HRRWQQGQASSCSRDIRRPPCLQ*TAKSAE
Trigger: CTCTGCAGACTTAGCCGTGCATTGCAGGCATGGAGG...CCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405742.7
ENST00000450638.5
CDS-3UTR CCA 90 bp TTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGGGCCCACATAGATGCTaGGGTTCAAGTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LQDPNHRTSGLHNTCGLRGPHRC*GSSAPG
Trigger: CCCTGGAGCACTTGAACCCCAGCATCTATGTGGGCC...CCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp TTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGATGGAAGGCTTGCCCTaGCAGTCACCGTCATCCTCG +
Preference number: 4 (lower is better)
Translates to: LQDPNHRTSGLHNTCGLRMEGLP*QSPSSS
Trigger: CGAGGATGACGGTGACTGCCAGGGCAAGCCTTCCAT...CCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GGGCCATGGTATAGGGCCCTCGAAGGGCTTGTGGCTGGGGTGATCCCAGGGGGCTGTGATCATGCCCAATaGCTCTCTTCTCATCCTCCA +
Preference number: 4 (lower is better)
Translates to: GPWYRALEGLVAGVIPGGCDHAQ*LSSHPP
Trigger: TGGAGGATGAGAAGAGAGCCATTGGGCATGATCACA...GCCCCCTGGGATCACCCCAGCCACAAGCCCTTCGAGGGCCCTATACCATGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR CCA 90 bp TGGAGAGCTGGGGTCAGGGCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGTGTGATCATGCCCAATaGCTCTCTTCTCATCCTCCA +
Preference number: 4 (lower is better)
Translates to: WRAGVRAIAPGLRRPSCRCDHAQ*LSSHPP
Trigger: TGGAGGATGAGAAGAGAGCCATTGGGCATGATCACA...CCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGCCCTGACCCCAGCTCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR CCA 90 bp GTGCCACAACCAGCTCGGAGCTGCCACTCTAACAGCAGAGTGGAGAGCTGGGGTTCATGGACCCGCTTCTaGTGGAGACACAGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: VPQPARSCHSNSRVESWGSWTRF*WRHRAR
Trigger: TCTGGCCCTGTGTCTCCACCAGAAGCGGGTCCATGA...ACCCCAGCTCTCCACTCTGCTGTTAGAGTGGCAGCTCCGAGCTGGTTGTGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp TTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGTCATGGACCCGCTTCTaGTGGAGACACAGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: LQDPNHRTSGLHNTCGLRSWTRF*WRHRAR
Trigger: TCTGGCCCTGTGTCTCCACCAGAAGCGGGTCCATGA...CCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp AGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCTCCACCACGCTGTCATaGACCCGCTTCTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: RTPTTERVVFTTPAACGLSTTLS*TRFWWR
Trigger: TCTCCACCAGAAGCGGGTCCATGACAGCGTGGTGGA...GAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GGGCCATGGTATAGGGCCCTCGAAGGGCTTGTGGCTGGGGTGATCCCAGGGGGCATCATGAGAGCATTCTaGAAGGCTCCATCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GPWYRALEGLVAGVIPGGIMRAF*KAPSCR
Trigger: TCTGCAGGATGGAGCCTTCCAGAATGCTCTCATGAT...GCCCCCTGGGATCACCCCAGCCACAAGCCCTTCGAGGGCCCTATACCATGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GCAGCCCTGCTGAGGTCTCCCCAGCTACTGTGCCACAACCAGCTCGGAGCTGCCAATGGTCTCAGCAGCTaGTTCCAACATGACTCGTGG +
Preference number: 4 (lower is better)
Translates to: AALLRSPQLLCHNQLGAANGLSS*FQHDSW
Trigger: CCACGAGTCATGTTGGAACCAGCTGCTGAGACCATT...GGCAGCTCCGAGCTGGTTGTGGCACAGTAGCTGGGGAGACCTCAGCAGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp TTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGCGGCCAGAACAGAGATaGACTGTCTGTACGGCGGCA +
Preference number: 4 (lower is better)
Translates to: LQDPNHRTSGLHNTCGLRRPEQR*TVCTAA
Trigger: TGCCGCCGTACAGACAGTCCATCTCTGTTCTGGCCG...CCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GTGCCACAACCAGCTCGGAGCTGCCACTCTAACAGCAGAGTGGAGAGCTGGGGTCGGCCAGAACAGAGATaGACTGTCTGTACGGCGGCA +
Preference number: 4 (lower is better)
Translates to: VPQPARSCHSNSRVESWGRPEQR*TVCTAA
Trigger: TGCCGCCGTACAGACAGTCCATCTCTGTTCTGGCCG...ACCCCAGCTCTCCACTCTGCTGTTAGAGTGGCAGCTCCGAGCTGGTTGTGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp AGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCCAGCCTCAGCTCAATaGTTTCTCCATCCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: SPRAEEAFLQDPNHRTSGPASAQ*FLHPWV
Trigger: GACCCAAGGATGGAGAAACCATTGAGCTGAGGCTGG...ACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp AGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCAAAGTGCACAGGAGGTaGCAGCAGGGTCAGGCGAGT +
Preference number: 4 (lower is better)
Translates to: RTPTTERVVFTTPAACGLKVHRR*QQGQAS
Trigger: ACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTT...GAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp TCAAAGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACACTCCAAGGTGGGCCATaGTATAGGGCCCTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: SKCTGGGSRVRRVPVPGTLQGGP*YRALEG
Trigger: CCCTTCGAGGGCCCTATACCATGGCCCACCTTGGAG...TGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCATGGGGTGGCCTTCATaGGAGACCTGCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: EAFLQDPNHRTSGLHNTCMGWPS*ETCRAR
Trigger: CCTGGCCCTGCAGGTCTCCCATGAAGGCCACCCCAT...GCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGTTTTAGCAGAGTGGAGAGCTaGGGTCAGGGCCATAGCCCC +
Preference number: 4 (lower is better)
Translates to: PTTERVVFTTPAACGLRFSRVES*GQGHSP
Trigger: GGGGCTATGGCCCTGACCCCAGCTCTCCACTCTGCT...AAAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp GGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGTAGCAGCTTCCTGTCACTaGTTAATCCTCCATGCCTGC +
Preference number: 4 (lower is better)
Translates to: GGSRVRRVPVPGTSGGRVAASCH*LILHAC
Trigger: GCAGGCATGGAGGATTAATCAGTGACAGGAAGCTGC...TACCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR TCA 90 bp TTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGGCTGGTAACCAAGCTTaGGGCTGTGCAGGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: LQDPNHRTSGLHNTCGLRAGNQA*GCAGRG
Trigger: ACCTCTACCTGCACAGCCTCAAGCTTGGTTACCAGC...CCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp CCAAGGAGTCTGAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGTGGGGGTGGCCCTTGTaGTCATGCCCAATGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PRSLRCFMPIRPWGGLHGWGWPL*SCPMAL
Trigger: GAGAGCCATTGGGCATGATCACAAGGGCCACCCCCA...CCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTCAGACTCCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR TCA 90 bp TCAAAGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACAAGCGCTTCAGACAGGTaGATGCCAAGCCTGCCATGG +
Preference number: 4 (lower is better)
Translates to: SKCTGGGSRVRRVPVPGTSASDR*MPSLPW
Trigger: CCATGGCAGGCTTGGCATTCACCTGTCTGAAGCGCT...TGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp AGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTGCATGGGGGAAGTCATaGGGAACTGTAATGCCAATG +
Preference number: 4 (lower is better)
Translates to: SPRAEEAFLQDPNHRTSGAWGKS*GTVMPM
Trigger: CATTGGCATTACAGTTCCTCATGACTTCCCCCATGC...ACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGATCCAAGGTAAGAGGTaGTGGCCCAACTTCTCTACC +
Preference number: 4 (lower is better)
Translates to: EVAAGSGEFLFQGHQEGGIQGKR*WPNFST
Trigger: GGTAGAGAAGTTGGGCCAGCACCTCTTACCTTGGAT...CCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGTAGTAGGCCCACATAGATaGTGGGGTTCAAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GGSRVRRVPVPGTSGGRVVGPHR*WGSSAP
Trigger: TGGAGCACTTGAACCCCAGCATCTATGTGGGCCTAC...TACCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GTGCCACAACCAGCTCGGAGCTGCCACTCTAACAGCAGAGTGGAGAGCTGGGGTCTTCAGACAGGTGAATaGCAAGCCTGCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: VPQPARSCHSNSRVESWGLQTGE*QACHGC
Trigger: GCAGCCATGGCAGGCTTGGCATTCACCTGTCTGAAG...ACCCCAGCTCTCCACTCTGCTGTTAGAGTGGCAGCTCCGAGCTGGTTGTGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp AGAGCTGGGGTCAGGGCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCGTAATGCCAATGGGGTaGTGTAGACATTCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: RAGVRAIAPGLRRPSCRTVMPMG*CRHSQS
Trigger: ACTTTGGGAATGTCTACAGCACCCCATTGGCATTAC...GGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGCCCTGACCCCAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GGCCAGAAAGACTTCCCAGGGAAGATGCTTGGCTCTCTGCTCCAAGGTGGGCCATGCTGTTCCCAGTTCTaGCCCACGCATGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GQKDFPGKMLGSLLQGGPCCSQF*PTHGGS
Trigger: ACTTCCCCCATGCGTGGGGCAGAACTGGGAACAGCA...TGGCCCACCTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGAAGTCTTTCTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCAGGGCCAGGACTTCCCAGGGAAGATaGTTGGCTCTCTGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LHAHQTMGWPSWETCRARTSQGR*LALCSK
Trigger: CTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGAAGT...CCTGGCCCTGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAACTTCCCAGGGAAGATaGTTGGCTCTCTGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: QEVAAGSGEFLFQGHQEGTSQGR*LALCSK
Trigger: CTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGAAGT...TCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GCTCAAAGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACTGAGGAGGCCTTCTTaGAGGACCCCAACCACAGAA +
Preference number: 4 (lower is better)
Translates to: AQSAQEVAAGSGEFLFQGLRRPS*RTPTTE
Trigger: TTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAG...TCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp AGGGCTTGTGGCTGGGGTGATCCCAGGGGGCATTGCTCAAAGTGCACAGGAGGTCTGAGGAGGCCTTCTTaGAGGACCCCAACCACAGAA +
Preference number: 4 (lower is better)
Translates to: RACGWGDPRGHCSKCTGGLRRPS*RTPTTE
Trigger: TTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAG...ACCTCCTGTGCACTTTGAGCAATGCCCCCTGGGATCACCCCAGCCACAAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GTGCCACAACCAGCTCGGAGCTGCCACTCTAACAGCAGAGTGGAGAGCTGGGGTCAACCAGCTCGGAGCTaGCACTCTAACAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: VPQPARSCHSNSRVESWGQPARS*HSNSRV
Trigger: CACTCTGCTGTTAGAGTGGCAGCTCCGAGCTGGTTG...ACCCCAGCTCTCCACTCTGCTGTTAGAGTGGCAGCTCCGAGCTGGTTGTGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp TTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGCCTCCATGCCTGCAATaGACGGCTAAGTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LQDPNHRTSGLHNTCGLRPPCLQ*TAKSAE
Trigger: CTCTGCAGACTTAGCCGTGCATTGCAGGCATGGAGG...CCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405742.7
ENST00000450638.5
CDS-3UTR CCA 90 bp CCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGTTTTTCCCAGCCTGCAGACTaGAGAGGCGTAGGCCCACAT +
Preference number: 4 (lower is better)
Translates to: PTTERVVFTTPAACGLRFSQPAD*RGVGPH
Trigger: ATGTGGGCCTACGCCTCTCCAGTCTGCAGGCTGGGA...AAAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp TCAAAGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCCACCACGCTGTCATaGACCCGCTTCTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SKCTGGGSRVRRVPVPGTSTTLS*TRFWWR
Trigger: TCTCCACCAGAAGCGGGTCCATGACAGCGTGGTGGA...TGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CCCCAATGCCCACATGGCGGCTCAGGCACCCTCCACTCCTCCCTGATGGGGTTAAATGGTCTCAGCAGCTaGTTCCAACATGACTCGTGG +
Preference number: 4 (lower is better)
Translates to: PQCPHGGSGTLHSSLMGLNGLSS*FQHDSW
Trigger: CCACGAGTCATGTTGGAACCAGCTGCTGAGACCATT...TAACCCCATCAGGGAGGAGTGGAGGGTGCCTGAGCCGCCATGTGGGCATTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS-3UTR CCA 90 bp TGGAGAGCTGGGGTCAGGGCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGAATCCTCCTAACTCATaGGCCTTCTTCAGGACATCT +
Preference number: 4 (lower is better)
Translates to: WRAGVRAIAPGLRRPSCRNPPNS*AFFRTS
Trigger: AGATGTCCTGAAGAAGGCCCATGAGTTAGGAGGATT...CCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGCCCTGACCCCAGCTCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGCAACAGTGGGGTGTTaGGGTCTCGGAGAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: EAFLQDPNHRTSGLHNTCATVGC*GLGEAA
Trigger: GGCAGCTTCTCCGAGACCCCAACACCCCACTGTTGC...GCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp ATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGAATACCTTGCAACAGTaGGGTGTTGGGGTCTCGGAG +
Preference number: 4 (lower is better)
Translates to: IAPGLRRPSCRTPTTERVNTLQQ*GVGVSE
Trigger: CTCCGAGACCCCAACACCCCACTGTTGCAAGGTATT...CACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCAATACCTTGCAACAGTaGGGTGTTGGGGTCTCGGAG +
Preference number: 4 (lower is better)
Translates to: PGLRRPSCRTPTTERVVFNTLQQ*GVGVSE
Trigger: CTCCGAGACCCCAACACCCCACTGTTGCAAGGTATT...GAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGTTTTTAAGTCTGCAGAGGGGTaGGGCGGGGGAAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: QPQNEWSSQHLRPADSVFKSAEG*GGGRSV
Trigger: CACAGACCTTCCCCCGCCCCACCCCTCTGCAGACTT...AAAAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000450638.5
CDS-3UTR TCA 90 bp AGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGCAGCTTCCTGTCACTaGTTAATCCTCCATGCCTGC +
Preference number: 4 (lower is better)
Translates to: SAQEVAAGSGEFLFQGHQAASCH*LILHAC
Trigger: GCAGGCATGGAGGATTAATCAGTGACAGGAAGCTGC...CTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR TCA 90 bp TCAAAGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACAGCTGGTAACCAAGCTTaGGGCTGTGCAGGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: SKCTGGGSRVRRVPVPGTAGNQA*GCAGRG
Trigger: ACCTCTACCTGCACAGCCTCAAGCTTGGTTACCAGC...TGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp AGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTCCCCCTTGTGGCCCCTaGCAAACTCACAGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: RRPSCRTPTTERVVFTTPPPCGP*QTHSWL
Trigger: GAGCCAACTGTGAGTTTGTCAGGGGCCACAAGGGGG...AGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR TCA 90 bp AGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTTGGGGGTGGCCCTTGTaGTCATGCCCAATGGCTCTC +
Preference number: 4 (lower is better)
Translates to: RRPSCRTPTTERVVFTTPWGWPL*SCPMAL
Trigger: GAGAGCCATTGGGCATGATCACAAGGGCCACCCCCA...AGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR TCA 90 bp CAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAACCAGGGTTGAAGTTTaGGCGCTTCAGACAGGTGAA +
Preference number: 4 (lower is better)
Translates to: QEVAAGSGEFLFQGHQEGTRVEV*ALQTGE
Trigger: TTCACCTGTCTGAAGCGCTCAAACTTCAACCCTGGT...TCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp TCAAAGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACAGTCTCCGACCAGGGTTaGAGTTTGAGCGCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: SKCTGGGSRVRRVPVPGTVSDQG*SLSASD
Trigger: GTCTGAAGCGCTCAAACTTCAACCCTGGTCGGAGAC...TGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp GCCCTCGAAGGGCTTGTGGCTGGGGTGATCCCAGGGGGCATTGCTCAAAGTGCAGCATGGGGGAAGTCATaGGGAACTGTAATGCCAATG +
Preference number: 4 (lower is better)
Translates to: ALEGLVAGVIPGGIAQSAAWGKS*GTVMPM
Trigger: CATTGGCATTACAGTTCCTCATGACTTCCCCCATGC...TGCACTTTGAGCAATGCCCCCTGGGATCACCCCAGCCACAAGCCCTTCGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp AGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGCAGCTGGGAAATCATaGGAGCATTCTGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: SAQEVAAGSGEFLFQGHQAAGKS*EHSGRL
Trigger: GAGCCTTCCAGAATGCTCTCATGATTTCCCAGCTGC...CTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp CAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAATGATCTCTTGGGTCTaGGGAATGGTCTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: QEVAAGSGEFLFQGHQEGMISWV*GMVSAA
Trigger: AGCTGCTGAGACCATTCCTCAGACCCAAGAGATCAT...TCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp GGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGTAATGATCTCTTGGGTCTaGGGAATGGTCTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GGSRVRRVPVPGTSGGRVMISWV*GMVSAA
Trigger: AGCTGCTGAGACCATTCCTCAGACCCAAGAGATCAT...TACCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGATCCAAGGTAAGAGGTaGTGGCCCAACTTCTCTACC +
Preference number: 4 (lower is better)
Translates to: DPNHRTSGLHNTCGLRTPIQGKR*WPNFST
Trigger: GGTAGAGAAGTTGGGCCAGCACCTCTTACCTTGGAT...CGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp TCAAAGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACAGACACAGGGCCAGAATaGCCAGGCCATACTGGTAGT +
Preference number: 4 (lower is better)
Translates to: SKCTGGGSRVRRVPVPGTDTGPE*PGHTGS
Trigger: ACTACCAGTATGGCCTGGGCATTCTGGCCCTGTGTC...TGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GGCCAGAAAGACTTCCCAGGGAAGATGCTTGGCTCTCTGCTCCAAGGTGGGCCACTTCAGACAGGTGAATaGCAAGCCTGCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: GQKDFPGKMLGSLLQGGPLQTGE*QACHGC
Trigger: GCAGCCATGGCAGGCTTGGCATTCACCTGTCTGAAG...TGGCCCACCTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGAAGTCTTTCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGTACAACATGACTCGTGGTaGCAGACAGTCTGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: GGSRVRRVPVPGTSGGRVQHDSW*QTVWED
Trigger: ATCTTCCCAGACTGTCTGGCACCACGAGTCATGTTG...TACCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGAAGAGACTAAGCACCTaGAGCGTGACACTGATGATC +
Preference number: 4 (lower is better)
Translates to: GGGSRVRRVPVPGTSGGRKRLST*SVTLMI
Trigger: GATCATCAGTGTCACGCTGCAGGTGCTTAGTCTCTT...CCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GGCCAGAAAGACTTCCCAGGGAAGATGCTTGGCTCTCTGCTCCAAGGTGGGCCAAGATGCTTGGCTCTCTaGTCCAAGGTGGGCCATGGT +
Preference number: 4 (lower is better)
Translates to: GQKDFPGKMLGSLLQGGPRCLAL*SKVGHG
Trigger: ACCATGGCCCACCTTGGAGCAGAGAGCCAAGCATCT...TGGCCCACCTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGAAGTCTTTCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGTTTTGGTCTTCACAACACCTaGGGCCTGCGGACTCCGTTT +
Preference number: 4 (lower is better)
Translates to: PTTERVVFTTPAACGLRFGLHNT*GLRTPF
Trigger: AAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACC...AAAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCAGGCAACCAGCTCGGAGCTaGCACTCTAACAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: EMLHAHQTMGWPSWETCRQPARS*HSNSRV
Trigger: CACTCTGCTGTTAGAGTGGCAGCTCCGAGCTGGTTG...CCTGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CTCCAAGGTGGGCCATGGTATAGGGCCCTCGAAGGGCTTGTGGCTGGGGTGATCCAAGGTAAGAGGTGCTaGCCCAACTTCTCTACCAGA +
Preference number: 4 (lower is better)
Translates to: LQGGPWYRALEGLVAGVIQGKRC*PNFSTR
Trigger: TCTGGTAGAGAAGTTGGGCCAGCACCTCTTACCTTG...GATCACCCCAGCCACAAGCCCTTCGAGGGCCCTATACCATGGCCCACCTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp ACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGCAAGGTAAGAGGTGCTaGCCCAACTTCTCTACCAGA +
Preference number: 4 (lower is better)
Translates to: TGGGSRVRRVPVPGTSGGQGKRC*PNFSTR
Trigger: TCTGGTAGAGAAGTTGGGCCAGCACCTCTTACCTTG...CCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CTGAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCAGGCCCACATAGATGCTaGGGTTCAAGTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LRCFMPIRPWGGLHGRPAGPHRC*GSSAPG
Trigger: CCCTGGAGCACTTGAACCCCAGCATCTATGTGGGCC...TGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CTGAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCAGGTAGAGGTCTTCCTTaGTCCCAGCCTGCAGACTGG +
Preference number: 4 (lower is better)
Translates to: LRCFMPIRPWGGLHGRPAGRGLP*SQPADW
Trigger: CCAGTCTGCAGGCTGGGACCAAGGAAGACCTCTACC...TGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGTTTTAGCCTGTCCCCCTTGTaGCCCCTGACAAACTCACAG +
Preference number: 4 (lower is better)
Translates to: PTTERVVFTTPAACGLRFSLSPL*PLTNSQ
Trigger: CTGTGAGTTTGTCAGGGGCCACAAGGGGGACAGGCT...AAAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR CCA 90 bp AGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTTGGCCCTCGGGGGTCTaGGCCTTCAAGATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RRPSCRTPTTERVVFTTPWPSGV*AFKISS
Trigger: AGAGGAGATCTTGAAGGCCCAGACCCCCGAGGGCCA...AGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCCTCCATCCTGCAGACTaGCCAGCAAAGCAACCCTCG +
Preference number: 4 (lower is better)
Translates to: EAFLQDPNHRTSGLHNTCLHPAD*PAKQPS
Trigger: CGAGGGTTGCTTTGCTGGCCAGTCTGCAGGATGGAG...GCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGATCATGAGAGCATTCTaGAAGGCTCCATCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GGGSRVRRVPVPGTSGGRIMRAF*KAPSCR
Trigger: TCTGCAGGATGGAGCCTTCCAGAATGCTCTCATGAT...CCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAAGAACGGGCAGCAGCTaGGAAATCATGAGAGCATTC +
Preference number: 4 (lower is better)
Translates to: QEVAAGSGEFLFQGHQEGRTGSS*EIMRAF
Trigger: GAATGCTCTCATGATTTCCCAGCTGCTGCCCGTTCT...TCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp ATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGTTCCAACATGACTCGTaGTGCCAGACAGTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: IAPGLRRPSCRTPTTERVFQHDS*CQTVWE
Trigger: TTCCCAGACTGTCTGGCACCACGAGTCATGTTGGAA...CACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCAATGGTCTCAGCAGCTaGTTCCAACATGACTCGTGG +
Preference number: 4 (lower is better)
Translates to: PGLRRPSCRTPTTERVVFNGLSS*FQHDSW
Trigger: CCACGAGTCATGTTGGAACCAGCTGCTGAGACCATT...GAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAATACCTTGCAACAGTaGGGTGTTGGGGTCTCGGAG +
Preference number: 4 (lower is better)
Translates to: RAEEAFLQDPNHRTSGLHNTLQQ*GVGVSE
Trigger: CTCCGAGACCCCAACACCCCACTGTTGCAAGGTATT...GTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GTGCCACAACCAGCTCGGAGCTGCCACTCTAACAGCAGAGTGGAGAGCTGGGGTCAATGTCATCACTGCTaGCATTCCCATCACTCCCCC +
Preference number: 4 (lower is better)
Translates to: VPQPARSCHSNSRVESWGQCHHC*HSHHSP
Trigger: GGGGGAGTGATGGGAATGCCAGCAGTGATGACATTG...ACCCCAGCTCTCCACTCTGCTGTTAGAGTGGCAGCTCCGAGCTGGTTGTGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS-3UTR TCA 90 bp GAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCAGGGCAGCTTCCTGTCACTaGTTAATCCTCCATGCCTGC +
Preference number: 4 (lower is better)
Translates to: EMLHAHQTMGWPSWETCRAASCH*LILHAC
Trigger: GCAGGCATGGAGGATTAATCAGTGACAGGAAGCTGC...CCTGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR TCA 90 bp CAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGTTTTTAGCGCTTCAGACAGGTaGATGCCAAGCCTGCCATGG +
Preference number: 4 (lower is better)
Translates to: QPQNEWSSQHLRPADSVFSASDR*MPSLPW
Trigger: CCATGGCAGGCTTGGCATTCACCTGTCTGAAGCGCT...AAAAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp AGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGACCAGGGTTGAAGTTTaGGCGCTTCAGACAGGTGAA +
Preference number: 4 (lower is better)
Translates to: SAQEVAAGSGEFLFQGHQTRVEV*ALQTGE
Trigger: TTCACCTGTCTGAAGCGCTCAAACTTCAACCCTGGT...CTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp AGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCACCAGGGTTGAAGTTTaGGCGCTTCAGACAGGTGAA +
Preference number: 4 (lower is better)
Translates to: RTPTTERVVFTTPAACGLTRVEV*ALQTGE
Trigger: TTCACCTGTCTGAAGCGCTCAAACTTCAACCCTGGT...GAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp AGGGCTTGTGGCTGGGGTGATCCCAGGGGGCATTGCTCAAAGTGCACAGGAGGTGCATGGGGGAAGTCATaGGGAACTGTAATGCCAATG +
Preference number: 4 (lower is better)
Translates to: RACGWGDPRGHCSKCTGGAWGKS*GTVMPM
Trigger: CATTGGCATTACAGTTCCTCATGACTTCCCCCATGC...ACCTCCTGTGCACTTTGAGCAATGCCCCCTGGGATCACCCCAGCCACAAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp TTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGATGATCTCTTGGGTCTaGGGAATGGTCTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LQDPNHRTSGLHNTCGLRMISWV*GMVSAA
Trigger: AGCTGCTGAGACCATTCCTCAGACCCAAGAGATCAT...CCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CTGAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCAGACACAGGGCCAGAATaGCCAGGCCATACTGGTAGT +
Preference number: 4 (lower is better)
Translates to: LRCFMPIRPWGGLHGRPADTGPE*PGHTGS
Trigger: ACTACCAGTATGGCCTGGGCATTCTGGCCCTGTGTC...TGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CTGAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCACAAGCCTGCCATGGCTaGTGTGTCCACAGAATGGTG +
Preference number: 4 (lower is better)
Translates to: LRCFMPIRPWGGLHGRPAQACHG*CVHRMV
Trigger: CACCATTCTGTGGACACAGCAGCCATGGCAGGCTTG...TGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp AGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCAACATGACTCGTGGTaGCAGACAGTCTGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: RTPTTERVVFTTPAACGLQHDSW*QTVWED
Trigger: ATCTTCCCAGACTGTCTGGCACCACGAGTCATGTTG...GAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp TTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGCAACATGACTCGTGGTaGCAGACAGTCTGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: LQDPNHRTSGLHNTCGLRQHDSW*QTVWED
Trigger: ATCTTCCCAGACTGTCTGGCACCACGAGTCATGTTG...CCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCAAGAGACTAAGCACCTaGAGCGTGACACTGATGATC +
Preference number: 4 (lower is better)
Translates to: PGLRRPSCRTPTTERVVFKRLST*SVTLMI
Trigger: GATCATCAGTGTCACGCTGCAGGTGCTTAGTCTCTT...GAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp AGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGTAAGAGACTAAGCACCTaGAGCGTGACACTGATGATC +
Preference number: 4 (lower is better)
Translates to: RWQQGQASSCSRDIRREGKRLST*SVTLMI
Trigger: GATCATCAGTGTCACGCTGCAGGTGCTTAGTCTCTT...ACCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CTGAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCAAGATGCTTGGCTCTCTaGTCCAAGGTGGGCCATGGT +
Preference number: 4 (lower is better)
Translates to: LRCFMPIRPWGGLHGRPARCLAL*SKVGHG
Trigger: ACCATGGCCCACCTTGGAGCAGAGAGCCAAGCATCT...TGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp AGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCCAAGGAGTCTGAGATaGTTCATGCCCATCAGACCA +
Preference number: 4 (lower is better)
Translates to: RTPTTERVVFTTPAACGLPRSLR*FMPIRP
Trigger: TGGTCTGATGGGCATGAAGCATCTCAGACTCCTTGG...GAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp AGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGCCAAGGAGTCTGAGATaGTTCATGCCCATCAGACCA +
Preference number: 4 (lower is better)
Translates to: SAQEVAAGSGEFLFQGHQPRSLR*FMPIRP
Trigger: TGGTCTGATGGGCATGAAGCATCTCAGACTCCTTGG...CTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCCAACCAGCTCGGAGCTaGCACTCTAACAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: EAFLQDPNHRTSGLHNTCQPARS*HSNSRV
Trigger: CACTCTGCTGTTAGAGTGGCAGCTCCGAGCTGGTTG...GCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp AGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTTCTCCCCAGCTACTGTaGCACAACCAGCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: RRPSCRTPTTERVVFTTPSPQLL*HNQLGA
Trigger: AGCTCCGAGCTGGTTGTGGCACAGTAGCTGGGGAGA...AGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp AGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGGTAGAGGTCTTCCTTaGTCCCAGCCTGCAGACTGG +
Preference number: 4 (lower is better)
Translates to: RRPSCRTPTTERVVFTTPGRGLP*SQPADW
Trigger: CCAGTCTGCAGGCTGGGACCAAGGAAGACCTCTACC...AGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGTTTTTATGGAAGGCTTGCCCTaGCAGTCACCGTCATCCTCG +
Preference number: 4 (lower is better)
Translates to: QPQNEWSSQHLRPADSVFMEGLP*QSPSSS
Trigger: CGAGGATGACGGTGACTGCCAGGGCAAGCCTTCCAT...AAAAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGTTTTTTCCACCACGCTGTCATaGACCCGCTTCTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: QPQNEWSSQHLRPADSVFSTTLS*TRFWWR
Trigger: TCTCCACCAGAAGCGGGTCCATGACAGCGTGGTGGA...AAAAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CATTCCCATCACTCCCCCAATGCCCACATGGCGGCTCAGGCACCCTCCACTCCTATCATGAGAGCATTCTaGAAGGCTCCATCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: HSHHSPNAHMAAQAPSTPIMRAF*KAPSCR
Trigger: TCTGCAGGATGGAGCCTTCCAGAATGCTCTCATGAT...AGGAGTGGAGGGTGCCTGAGCCGCCATGTGGGCATTGGGGGAGTGATGGGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS-3UTR CCA 90 bp CAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGTTTTTCGGCCAGAACAGAGATaGACTGTCTGTACGGCGGCA +
Preference number: 4 (lower is better)
Translates to: QPQNEWSSQHLRPADSVFRPEQR*TVCTAA
Trigger: TGCCGCCGTACAGACAGTCCATCTCTGTTCTGGCCG...AAAAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGAATCCTCCTAACTCATaGGCCTTCTTCAGGACATCT +
Preference number: 4 (lower is better)
Translates to: GGGSRVRRVPVPGTSGGRNPPNS*AFFRTS
Trigger: AGATGTCCTGAAGAAGGCCCATGAGTTAGGAGGATT...CCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCAGGAATACCTTGCAACAGTaGGGTGTTGGGGTCTCGGAG +
Preference number: 4 (lower is better)
Translates to: EMLHAHQTMGWPSWETCRNTLQQ*GVGVSE
Trigger: CTCCGAGACCCCAACACCCCACTGTTGCAAGGTATT...CCTGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCAGGCCAGCCTCAGCTCAATaGTTTCTCCATCCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: EMLHAHQTMGWPSWETCRPASAQ*FLHPWV
Trigger: GACCCAAGGATGGAGAAACCATTGAGCTGAGGCTGG...CCTGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GGCCAGAAAGACTTCCCAGGGAAGATGCTTGGCTCTCTGCTCCAAGGTGGGCCACCAGCCTCAGCTCAATaGTTTCTCCATCCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: GQKDFPGKMLGSLLQGGPPASAQ*FLHPWV
Trigger: GACCCAAGGATGGAGAAACCATTGAGCTGAGGCTGG...TGGCCCACCTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGAAGTCTTTCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp AGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTAAAGTGCACAGGAGGTaGCAGCAGGGTCAGGCGAGT +
Preference number: 4 (lower is better)
Translates to: RRPSCRTPTTERVVFTTPKVHRR*QQGQAS
Trigger: ACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTT...AGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp TCAAAGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACAACCAGGGTTGAAGTTTaGGCGCTTCAGACAGGTGAA +
Preference number: 4 (lower is better)
Translates to: SKCTGGGSRVRRVPVPGTTRVEV*ALQTGE
Trigger: TTCACCTGTCTGAAGCGCTCAAACTTCAACCCTGGT...TGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp GGCCAGAAAGACTTCCCAGGGAAGATGCTTGGCTCTCTGCTCCAAGGTGGGCCAATGATCTCTTGGGTCTaGGGAATGGTCTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GQKDFPGKMLGSLLQGGPMISWV*GMVSAA
Trigger: AGCTGCTGAGACCATTCCTCAGACCCAAGAGATCAT...TGGCCCACCTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGAAGTCTTTCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp ACTGTAGCAGGTCCACAGGCCATCAATGCTTTAATTTTGTCAGAGGCAGGCACTGGCTTGTGGCTGGGGTaGTCCCAGGGGGCATTGCTC +
Preference number: 4 (lower is better)
Translates to: TVAGPQAINALILSEAGTGLWLG*SQGALL
Trigger: GAGCAATGCCCCCTGGGATCACCCCAGCCACAAGCC...AGTGCCTGCCTCTGACAAAATTAAAGCATTGATGGCCTGTGGACCTGCTACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS-3UTR TCA 90 bp GTGCCACAACCAGCTCGGAGCTGCCACTCTAACAGCAGAGTGGAGAGCTGGGGTTTTTGCCAAGGAGTCTaGGATGCTTCATGCCCATCA +
Preference number: 4 (lower is better)
Translates to: VPQPARSCHSNSRVESWGFCQGV*DASCPS
Trigger: TGATGGGCATGAAGCATCTCAGACTCCTTGGCAAAA...ACCCCAGCTCTCCACTCTGCTGTTAGAGTGGCAGCTCCGAGCTGGTTGTGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp TTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGTTTTGCCAAGGAGTCTaGGATGCTTCATGCCCATCA +
Preference number: 4 (lower is better)
Translates to: LQDPNHRTSGLHNTCGLRFCQGV*DASCPS
Trigger: TGATGGGCATGAAGCATCTCAGACTCCTTGGCAAAA...CCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp AGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCTTAATCCTCCATGCCTaGAATGCACGGCTAAGTCTG +
Preference number: 4 (lower is better)
Translates to: RTPTTERVVFTTPAACGLLILHA*NARLSL
Trigger: CAGACTTAGCCGTGCATTGCAGGCATGGAGGATTAA...GAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR GCA 90 bp CCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGTTTTGTAGGCCCACATAGATaGTGGGGTTCAAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PTTERVVFTTPAACGLRFVGPHR*WGSSAP
Trigger: TGGAGCACTTGAACCCCAGCATCTATGTGGGCCTAC...AAAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CCAAGGAGTCTGAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGGTAGGCCCACATAGATaGTGGGGTTCAAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PRSLRCFMPIRPWGGLHGVGPHR*WGSSAP
Trigger: TGGAGCACTTGAACCCCAGCATCTATGTGGGCCTAC...CCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTCAGACTCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGTTTTTCAAGCCTGCCATGGCTaGTGTGTCCACAGAATGGTG +
Preference number: 4 (lower is better)
Translates to: QPQNEWSSQHLRPADSVFQACHG*CVHRMV
Trigger: CACCATTCTGTGGACACAGCAGCCATGGCAGGCTTG...AAAAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCGTAATGCCAATGGGGTaGTGTAGACATTCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: PGLRRPSCRTPTTERVVFVMPMG*CRHSQS
Trigger: ACTTTGGGAATGTCTACAGCACCCCATTGGCATTAC...GAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGTAATGCCAATGGGGTaGTGTAGACATTCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: QEVAAGSGEFLFQGHQEGVMPMG*CRHSQS
Trigger: ACTTTGGGAATGTCTACAGCACCCCATTGGCATTAC...TCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp TTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGAAGAGACTAAGCACCTaGAGCGTGACACTGATGATC +
Preference number: 4 (lower is better)
Translates to: LQDPNHRTSGLHNTCGLRKRLST*SVTLMI
Trigger: GATCATCAGTGTCACGCTGCAGGTGCTTAGTCTCTT...CCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp AGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGATCCCAGGGGGCATTaGTCAAAGTGCACAGGAGGT +
Preference number: 4 (lower is better)
Translates to: RRPSCRTPTTERVVFTTPDPRGH*SKCTGG
Trigger: ACCTCCTGTGCACTTTGAGCAATGCCCCCTGGGATC...AGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp AGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTCAACCAGCTCGGAGCTaGCACTCTAACAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: RRPSCRTPTTERVVFTTPQPARS*HSNSRV
Trigger: CACTCTGCTGTTAGAGTGGCAGCTCCGAGCTGGTTG...AGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAATGGCTGTCCATCTCTaGTATTTCACACATCTCAGT +
Preference number: 4 (lower is better)
Translates to: AIAPGLRRPSCRTPTTERMAVHL*YFTHLS
Trigger: ACTGAGATGTGTGAAATACCAGAGATGGACAGCCAT...TCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
CDS-3UTR CCA 90 bp CGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACTGTGATCATGCCCAATaGCTCTCTTCTCATCCTCCA +
Preference number: 4 (lower is better)
Translates to: RAEEAFLQDPNHRTSGLHCDHAQ*LSSHPP
Trigger: TGGAGGATGAGAAGAGAGCCATTGGGCATGATCACA...GTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR CCA 90 bp TCAAAGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACAAGAACGGGCAGCAGCTaGGAAATCATGAGAGCATTC +
Preference number: 4 (lower is better)
Translates to: SKCTGGGSRVRRVPVPGTRTGSS*EIMRAF
Trigger: GAATGCTCTCATGATTTCCCAGCTGCTGCCCGTTCT...TGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp TCAAAGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACAAATGGTCTCAGCAGCTaGTTCCAACATGACTCGTGG +
Preference number: 4 (lower is better)
Translates to: SKCTGGGSRVRRVPVPGTNGLSS*FQHDSW
Trigger: CCACGAGTCATGTTGGAACCAGCTGCTGAGACCATT...TGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CTGAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCACTTGGGTCTGAGGAATaGTCTCAGCAGCTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: LRCFMPIRPWGGLHGRPALGSEE*SQQLVP
Trigger: TGGAACCAGCTGCTGAGACCATTCCTCAGACCCAAG...TGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp ACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGTGGTTTCTCCATCCTTaGGTCTGTAGTCAGCAATAC +
Preference number: 4 (lower is better)
Translates to: TGGGSRVRRVPVPGTSGGWFLHP*VCSQQY
Trigger: GTATTGCTGACTACAGACCCAAGGATGGAGAAACCA...CCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CACTGTAGCAGGTCCACAGGCCATCAATGCTTTAATTTTGTCAGAGGCAGGCACAGTGTGCGAGGCTGCTaGGATGAGGGAGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: HCSRSTGHQCFNFVRGRHSVRGC*DEGAQG
Trigger: CCCCTGAGCTCCCTCATCCCAGCAGCCTCGCACACT...GTGCCTGCCTCTGACAAAATTAAAGCATTGATGGCCTGTGGACCTGCTACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS-3UTR CCA 90 bp GAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCCAACCACAGAACGAGTaGTCTTCACAACACCTGCGG +
Preference number: 4 (lower is better)
Translates to: EAFLQDPNHRTSGLHNTCQPQNE*SSQHLR
Trigger: CCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTG...GCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp AGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCAGCTGGGAAATCATaGGAGCATTCTGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: RRPSCRTPTTERVVFTTPAAGKS*EHSGRL
Trigger: GAGCCTTCCAGAATGCTCTCATGATTTCCCAGCTGC...AGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR TCA 90 bp GAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCAGGTTTTGCCAAGGAGTCTaGGATGCTTCATGCCCATCA +
Preference number: 4 (lower is better)
Translates to: EMLHAHQTMGWPSWETCRFCQGV*DASCPS
Trigger: TGATGGGCATGAAGCATCTCAGACTCCTTGGCAAAA...CCTGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCAGGTTAATCCTCCATGCCTaGAATGCACGGCTAAGTCTG +
Preference number: 4 (lower is better)
Translates to: EMLHAHQTMGWPSWETCRLILHA*NARLSL
Trigger: CAGACTTAGCCGTGCATTGCAGGCATGGAGGATTAA...CCTGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR GCA 90 bp GAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCATCCAAGGTAAGAGGTaGTGGCCCAACTTCTCTACC +
Preference number: 4 (lower is better)
Translates to: EAFLQDPNHRTSGLHNTCIQGKR*WPNFST
Trigger: GGTAGAGAAGTTGGGCCAGCACCTCTTACCTTGGAT...GCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGTTTTCCAAGGAGTCTGAGATaGTTCATGCCCATCAGACCA +
Preference number: 4 (lower is better)
Translates to: PTTERVVFTTPAACGLRFPRSLR*FMPIRP
Trigger: TGGTCTGATGGGCATGAAGCATCTCAGACTCCTTGG...AAAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp ACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGTCCACAGGCCATCAATaGTTTAATTTTGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: TGGGSRVRRVPVPGTSGGSTGHQ*FNFVRG
Trigger: GCCTCTGACAAAATTAAAGCATTGATGGCCTGTGGA...CCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215838.8
ENST00000407817.3
CDS-3UTR GCA 90 bp GTGCCACAACCAGCTCGGAGCTGCCACTCTAACAGCAGAGTGGAGAGCTGGGGTTATCTAGCGAGTGAGTaGTCAGTCATAGTAGTGGGT +
Preference number: 4 (lower is better)
Translates to: VPQPARSCHSNSRVESWGYLASE*SVIVVG
Trigger: ACCCACTACTATGACTGAGCACTCACTCGCTAGATA...ACCCCAGCTCTCCACTCTGCTGTTAGAGTGGCAGCTCCGAGCTGGTTGTGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS-3UTR CCA 90 bp GACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGAACTTCTCTACCAGATaGCTGTCCATCTCTGGTATT +
Preference number: 4 (lower is better)
Translates to: DPNHRTSGLHNTCGLRTPNFSTR*LSISGI
Trigger: AATACCAGAGATGGACAGCCATCTGGTAGAGAAGTT...CGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CTGAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCACAAGGTAAGAGGTGCTaGCCCAACTTCTCTACCAGA +
Preference number: 4 (lower is better)
Translates to: LRCFMPIRPWGGLHGRPAQGKRC*PNFSTR
Trigger: TCTGGTAGAGAAGTTGGGCCAGCACCTCTTACCTTG...TGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GCTCAGTCAGTAGTCAATGTCATCACTGCTGGCATTCCCATCACTCCCCCAATGGGCCCACATAGATGCTaGGGTTCAAGTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AQSVVNVITAGIPITPPMGPHRC*GSSAPG
Trigger: CCCTGGAGCACTTGAACCCCAGCATCTATGTGGGCC...CATTGGGGGAGTGATGGGAATGCCAGCAGTGATGACATTGACTACTGACTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS-3UTR CCA 90 bp GAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCAGAACGGGCAGCAGCTaGGAAATCATGAGAGCATTC +
Preference number: 4 (lower is better)
Translates to: EAFLQDPNHRTSGLHNTCRTGSS*EIMRAF
Trigger: GAATGCTCTCATGATTTCCCAGCTGCTGCCCGTTCT...GCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CTGAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCAAGAACGGGCAGCAGCTaGGAAATCATGAGAGCATTC +
Preference number: 4 (lower is better)
Translates to: LRCFMPIRPWGGLHGRPARTGSS*EIMRAF
Trigger: GAATGCTCTCATGATTTCCCAGCTGCTGCCCGTTCT...TGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGTTTTTCTTGGGTCTGAGGAATaGTCTCAGCAGCTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: QPQNEWSSQHLRPADSVFLGSEE*SQQLVP
Trigger: TGGAACCAGCTGCTGAGACCATTCCTCAGACCCAAG...AAAAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp AGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTCTTGGGTCTGAGGAATaGTCTCAGCAGCTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: RRPSCRTPTTERVVFTTPLGSEE*SQQLVP
Trigger: TGGAACCAGCTGCTGAGACCATTCCTCAGACCCAAG...AGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp TTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGAATCCTCCTAACTCATaGGCCTTCTTCAGGACATCT +
Preference number: 4 (lower is better)
Translates to: LQDPNHRTSGLHNTCGLRNPPNS*AFFRTS
Trigger: AGATGTCCTGAAGAAGGCCCATGAGTTAGGAGGATT...CCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAATCCTCCTAACTCATaGGCCTTCTTCAGGACATCT +
Preference number: 4 (lower is better)
Translates to: RAEEAFLQDPNHRTSGLHNPPNS*AFFRTS
Trigger: AGATGTCCTGAAGAAGGCCCATGAGTTAGGAGGATT...GTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp AGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGTGGTTTCTCCATCCTTaGGTCTGTAGTCAGCAATAC +
Preference number: 4 (lower is better)
Translates to: SAQEVAAGSGEFLFQGHQWFLHP*VCSQQY
Trigger: GTATTGCTGACTACAGACCCAAGGATGGAGAAACCA...CTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACTGGTTTCTCCATCCTTaGGTCTGTAGTCAGCAATAC +
Preference number: 4 (lower is better)
Translates to: RAEEAFLQDPNHRTSGLHWFLHP*VCSQQY
Trigger: GTATTGCTGACTACAGACCCAAGGATGGAGAAACCA...GTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
3UTR CAA 72 bp GTCTTCACAACACCTGCGGCCTGCGGACTCCGTTTTTaGCCAAGGAGTCTGAGATGCTTCATGCCCATCAGA +
Preference number: 4 (lower is better)
Translates to: VFTTPAACGLRF*PRSLRCFMPIR
Trigger: TCTGATGGGCATGAAGCATCTCAGACTCCTTGGCAAAAAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CTGAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCATTAATCCTCCATGCCTaGAATGCACGGCTAAGTCTG +
Preference number: 4 (lower is better)
Translates to: LRCFMPIRPWGGLHGRPALILHA*NARLSL
Trigger: CAGACTTAGCCGTGCATTGCAGGCATGGAGGATTAA...TGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR GCA 90 bp AGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTCCAAGGAGTCTGAGATaGTTCATGCCCATCAGACCA +
Preference number: 4 (lower is better)
Translates to: RRPSCRTPTTERVVFTTPPRSLR*FMPIRP
Trigger: TGGTCTGATGGGCATGAAGCATCTCAGACTCCTTGG...AGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CCAAGGAGTCTGAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGATCATGAGAGCATTCTaGAAGGCTCCATCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PRSLRCFMPIRPWGGLHGIMRAF*KAPSCR
Trigger: TCTGCAGGATGGAGCCTTCCAGAATGCTCTCATGAT...CCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTCAGACTCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGTTTTTTTCCAACATGACTCGTaGTGCCAGACAGTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: QPQNEWSSQHLRPADSVFFQHDS*CQTVWE
Trigger: TTCCCAGACTGTCTGGCACCACGAGTCATGTTGGAA...AAAAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GTCATAGTAGTGGGTGCTCAGTCAGTAGTCAATGTCATCACTGCTGGCATTCCCCGGCCAGAACAGAGATaGACTGTCTGTACGGCGGCA +
Preference number: 4 (lower is better)
Translates to: VIVVGAQSVVNVITAGIPRPEQR*TVCTAA
Trigger: TGCCGCCGTACAGACAGTCCATCTCTGTTCTGGCCG...GGGAATGCCAGCAGTGATGACATTGACTACTGACTGAGCACCCACTACTATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS-3UTR CCA 90 bp ACTGTAGCAGGTCCACAGGCCATCAATGCTTTAATTTTGTCAGAGGCAGGCACTGCAACAGTGGGGTGTTaGGGTCTCGGAGAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: TVAGPQAINALILSEAGTATVGC*GLGEAA
Trigger: GGCAGCTTCTCCGAGACCCCAACACCCCACTGTTGC...AGTGCCTGCCTCTGACAAAATTAAAGCATTGATGGCCTGTGGACCTGCTACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS-3UTR CCA 90 bp GTCATAGTAGTGGGTGCTCAGTCAGTAGTCAATGTCATCACTGCTGGCATTCCCAAAGTGCACAGGAGGTaGCAGCAGGGTCAGGCGAGT +
Preference number: 4 (lower is better)
Translates to: VIVVGAQSVVNVITAGIPKVHRR*QQGQAS
Trigger: ACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTT...GGGAATGCCAGCAGTGATGACATTGACTACTGACTGAGCACCCACTACTATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS-3UTR CCA 90 bp CACTGTAGCAGGTCCACAGGCCATCAATGCTTTAATTTTGTCAGAGGCAGGCACCATCAGACCATGGGGTaGCCTTCATGGGAGACCTGC +
Preference number: 4 (lower is better)
Translates to: HCSRSTGHQCFNFVRGRHHQTMG*PSWETC
Trigger: GCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATG...GTGCCTGCCTCTGACAAAATTAAAGCATTGATGGCCTGTGGACCTGCTACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS-3UTR GCA 90 bp CAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGTTTTTCTGATTAATCCTCCATaGCTGCAATGCACGGCTAAG +
Preference number: 4 (lower is better)
Translates to: QPQNEWSSQHLRPADSVFLINPP*LQCTAK
Trigger: CTTAGCCGTGCATTGCAGGCATGGAGGATTAATCAG...AAAAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR GCA 90 bp CACTGTAGCAGGTCCACAGGCCATCAATGCTTTAATTTTGTCAGAGGCAGGCACCAAGCCTGCCATGGCTaGTGTGTCCACAGAATGGTG +
Preference number: 4 (lower is better)
Translates to: HCSRSTGHQCFNFVRGRHQACHG*CVHRMV
Trigger: CACCATTCTGTGGACACAGCAGCCATGGCAGGCTTG...GTGCCTGCCTCTGACAAAATTAAAGCATTGATGGCCTGTGGACCTGCTACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS-3UTR CCA 90 bp CTGAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCATGGTTTCTCCATCCTTaGGTCTGTAGTCAGCAATAC +
Preference number: 4 (lower is better)
Translates to: LRCFMPIRPWGGLHGRPAWFLHP*VCSQQY
Trigger: GTATTGCTGACTACAGACCCAAGGATGGAGAAACCA...TGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp CAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGTTTTTGTAATGCCAATGGGGTaGTGTAGACATTCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: QPQNEWSSQHLRPADSVFVMPMG*CRHSQS
Trigger: ACTTTGGGAATGTCTACAGCACCCCATTGGCATTAC...AAAAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR GCA 90 bp GAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCTCCACAGGCCATCAATaGTTTAATTTTGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: EAFLQDPNHRTSGLHNTCSTGHQ*FNFVRG
Trigger: GCCTCTGACAAAATTAAAGCATTGATGGCCTGTGGA...GCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215838.8
ENST00000407817.3
CDS-3UTR CCA 90 bp GAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCAACTTCTCTACCAGATaGCTGTCCATCTCTGGTATT +
Preference number: 4 (lower is better)
Translates to: EAFLQDPNHRTSGLHNTCNFSTR*LSISGI
Trigger: AATACCAGAGATGGACAGCCATCTGGTAGAGAAGTT...GCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp GTCATAGTAGTGGGTGCTCAGTCAGTAGTCAATGTCATCACTGCTGGCATTCCCCAACCACAGAACGAGTaGTCTTCACAACACCTGCGG +
Preference number: 4 (lower is better)
Translates to: VIVVGAQSVVNVITAGIPQPQNE*SSQHLR
Trigger: CCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTG...GGGAATGCCAGCAGTGATGACATTGACTACTGACTGAGCACCCACTACTATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS-3UTR CCA 90 bp CGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACATGGCTGTCCATCTCTaGTATTTACATCAAATTTCC +
Preference number: 4 (lower is better)
Translates to: RAEEAFLQDPNHRTSGLHMAVHL*YLHQIS
Trigger: GGAAATTTGATGTAAATACCAGAGATGGACAGCCAT...GTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450638.5
CDS-3UTR TCA 90 bp GCTCAGTCAGTAGTCAATGTCATCACTGCTGGCATTCCCATCACTCCCCCAATGTTTTGCCAAGGAGTCTaGGATGCTTCATGCCCATCA +
Preference number: 4 (lower is better)
Translates to: AQSVVNVITAGIPITPPMFCQGV*DASCPS
Trigger: TGATGGGCATGAAGCATCTCAGACTCCTTGGCAAAA...CATTGGGGGAGTGATGGGAATGCCAGCAGTGATGACATTGACTACTGACTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS-3UTR GCA 90 bp AGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTAGTCATAGTAGTGGGTaGTCAGTCAGTAGTCAATGT +
Preference number: 4 (lower is better)
Translates to: RRPSCRTPTTERVVFTTPSHSSG*SVSSQC
Trigger: ACATTGACTACTGACTGAGCACCCACTACTATGACT...AGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS-3UTR CCA 90 bp AGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTAACTTCTCTACCAGATaGCTGTCCATCTCTGGTATT +
Preference number: 4 (lower is better)
Translates to: RRPSCRTPTTERVVFTTPNFSTR*LSISGI
Trigger: AATACCAGAGATGGACAGCCATCTGGTAGAGAAGTT...AGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CCA 90 bp CAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGTTTTTAACTTCTCTACCAGATaGCTGTCCATCTCTGGTATT +
Preference number: 4 (lower is better)
Translates to: QPQNEWSSQHLRPADSVFNFSTR*LSISGI
Trigger: AATACCAGAGATGGACAGCCATCTGGTAGAGAAGTT...AAAAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp GGGCCATGGTATAGGGCCCTCGAAGGGCTTGTGGCTGGGGTGATCCCAGGGGGCTGGCCCATGGAAGGCTaGCCCTGGCAGTCACCGTCA +
Preference number: 5 (lower is better)
Translates to: GPWYRALEGLVAGVIPGGWPMEG*PWQSPS
Trigger: TGACGGTGACTGCCAGGGCAAGCCTTCCATGGGCCA...GCCCCCTGGGATCACCCCAGCCACAAGCCCTTCGAGGGCCCTATACCATGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp TGGAGAGCTGGGGTCAGGGCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGTGGCCCATGGAAGGCTaGCCCTGGCAGTCACCGTCA +
Preference number: 5 (lower is better)
Translates to: WRAGVRAIAPGLRRPSCRWPMEG*PWQSPS
Trigger: TGACGGTGACTGCCAGGGCAAGCCTTCCATGGGCCA...CCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGCCCTGACCCCAGCTCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp CCCCAATGCCCACATGGCGGCTCAGGCACCCTCCACTCCTCCCTGATGGGGTTATGCAACAGTGGGGTGTaGGGGTCTCGGAGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: PQCPHGGSGTLHSSLMGLCNSGV*GSRRSC
Trigger: GCAGCTTCTCCGAGACCCCAACACCCCACTGTTGCA...TAACCCCATCAGGGAGGAGTGGAGGGTGCCTGAGCCGCCATGTGGGCATTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS-3UTR CAA 90 bp GAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGTGCAACAGTGGGGTGTaGGGGTCTCGGAGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: EVAAGSGEFLFQGHQEGGCNSGV*GSRRSC
Trigger: GCAGCTTCTCCGAGACCCCAACACCCCACTGTTGCA...CCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp CTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCAGGGCCAGGACCAGCCTGTCCCCCTaGTGGCCCCTGACAAACTCA +
Preference number: 5 (lower is better)
Translates to: LHAHQTMGWPSWETCRARTSLSP*WPLTNS
Trigger: TGAGTTTGTCAGGGGCCACAAGGGGGACAGGCTGGT...CCTGGCCCTGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR CAA 90 bp CCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACCAGCCTGTCCCCCTaGTGGCCCCTGACAAACTCA +
Preference number: 5 (lower is better)
Translates to: PGLRRPSCRTPTTERVVFTSLSP*WPLTNS
Trigger: TGAGTTTGTCAGGGGCCACAAGGGGGACAGGCTGGT...GAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR CAA 90 bp GGGCCATGGTATAGGGCCCTCGAAGGGCTTGTGGCTGGGGTGATCCCAGGGGGCTGTCTCCGACCAGGGTaGAAGTTTGAGCGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: GPWYRALEGLVAGVIPGGCLRPG*KFERFR
Trigger: TCTGAAGCGCTCAAACTTCAACCCTGGTCGGAGACA...GCCCCCTGGGATCACCCCAGCCACAAGCCCTTCGAGGGCCCTATACCATGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp GAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGGGCCATGGTGATCCGTaGTCTCCGACCAGGGTTGAA +
Preference number: 5 (lower is better)
Translates to: EVAAGSGEFLFQGHQEGGGHGDP*SPTRVE
Trigger: TTCAACCCTGGTCGGAGACAACGGATCACCATGGCC...CCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp AGAGCTGGGGTCAGGGCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCAAAGCAACCCTCGCCTaGAGACATGCTGTTCCCAGT +
Preference number: 5 (lower is better)
Translates to: RAGVRAIAPGLRRPSCRTKATLA*RHAVPS
Trigger: ACTGGGAACAGCATGTCTCAAGGCGAGGGTTGCTTT...GGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGCCCTGACCCCAGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp CACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGTGCAACAGTGGGGTGTaGGGGTCTCGGAGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: HRRWQQGQASSCSRDIRRCNSGV*GSRRSC
Trigger: GCAGCTTCTCCGAGACCCCAACACCCCACTGTTGCA...CCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp GACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGCCAGGCTGGCCAGACTaGGCCAGAAAGACTTCCCAG +
Preference number: 5 (lower is better)
Translates to: DPNHRTSGLHNTCGLRTPPGWPD*ARKTSQ
Trigger: CTGGGAAGTCTTTCTGGCCAAGTCTGGCCAGCCTGG...CGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp CCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCCCAGGCTGGCCAGACTaGGCCAGAAAGACTTCCCAG +
Preference number: 5 (lower is better)
Translates to: PGLRRPSCRTPTTERVVFPGWPD*ARKTSQ
Trigger: CTGGGAAGTCTTTCTGGCCAAGTCTGGCCAGCCTGG...GAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp AGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGGGTGCTGAGGAGGCCTTCTaGCAGGACCCCAACCACAGA +
Preference number: 5 (lower is better)
Translates to: RWQQGQASSCSRDIRREGAEEAF*QDPNHR
Trigger: TCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGC...ACCCTCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp CTCCAAGGTGGGCCATGGTATAGGGCCCTCGAAGGGCTTGTGGCTGGGGTGATCTACTTCCCCCTTCTCTaGTCCCTGCCCCTGCACCTG +
Preference number: 5 (lower is better)
Translates to: LQGGPWYRALEGLVAGVIYFPLL*SLPLHL
Trigger: CAGGTGCAGGGGCAGGGACAAGAGAAGGGGGAAGTA...GATCACCCCAGCCACAAGCCCTTCGAGGGCCCTATACCATGGCCCACCTTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS-3UTR CAA 90 bp GGCCAGAAAGACTTCCCAGGGAAGATGCTTGGCTCTCTGCTCCAAGGTGGGCCATGGCCCATGGAAGGCTaGCCCTGGCAGTCACCGTCA +
Preference number: 5 (lower is better)
Translates to: GQKDFPGKMLGSLLQGGPWPMEG*PWQSPS
Trigger: TGACGGTGACTGCCAGGGCAAGCCTTCCATGGGCCA...TGGCCCACCTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGAAGTCTTTCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp AGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCACCAGCCTGTCCCCCTaGTGGCCCCTGACAAACTCA +
Preference number: 5 (lower is better)
Translates to: RTPTTERVVFTTPAACGLTSLSP*WPLTNS
Trigger: TGAGTTTGTCAGGGGCCACAAGGGGGACAGGCTGGT...GAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR CAA 90 bp GCCATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGATCCTCCAGGAACCATTaGAGCTGTGAGACCAGCCTG +
Preference number: 5 (lower is better)
Translates to: AIAPGLRRPSCRTPTTERSSRNH*SCETSL
Trigger: CAGGCTGGTCTCACAGCTCAAATGGTTCCTGGAGGA...TCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR CAA 90 bp ATAGCCCCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGTCCCAGGGAAGATGCTaGGCTCTCTGCTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: IAPGLRRPSCRTPTTERVSQGRC*ALCSKV
Trigger: CACCTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGA...CACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGGGGCTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp TTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGGCTGAGGAGGCCTTCTaGCAGGACCCCAACCACAGA +
Preference number: 5 (lower is better)
Translates to: LQDPNHRTSGLHNTCGLRAEEAF*QDPNHR
Trigger: TCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGC...CCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS TCA 90 bp GGAAGGCTCCATCCTGCAGACTGGCCAGCAAAGCAACCCTCGCCTTaGGACATGCTGTTCCCAGTTCTGCCCCACGCATGGGGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: GRLHPADWPAKQPSP*DMLFPVLPHAWGKS
Trigger: TGACTTCCCCCATGCGTGGGGCAGAACTGGGAACAGCATGTCTCAAGGCGAGGGTTGCTTTGCTGGCCAGTCTGCAGGATGGAGCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS GCA 90 bp CCTTGGTCCCAGCCTGCAGACTGGAGAGGCGTAGGCCCACATAGATaGTGGGGTTCAAGTGCTCCAGGGAAAGCCGGTCCATCCAAGGTA +
Preference number: 5 (lower is better)
Translates to: PWSQPADWRGVGPHR*WGSSAPGKAGPSKV
Trigger: TACCTTGGATGGACCGGCTTTCCCTGGAGCACTTGAACCCCAGCATCTATGTGGGCCTACGCCTCTCCAGTCTGCAGGCTGGGACCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000423350.1
ENST00000450638.5
CDS-3UTR CAA 90 bp ACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGCTGACAAACTCACAGTaGGCTCTGAGAGCGAGCAGG +
Preference number: 5 (lower is better)
Translates to: TGGGSRVRRVPVPGTSGGLTNSQ*ALRASR
Trigger: CCTGCTCGCTCTCAGAGCCAACTGTGAGTTTGTCAG...CCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR CAA 90 bp CTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCAGGGCCAGGCTGACAAACTCACAGTaGGCTCTGAGAGCGAGCAGG +
Preference number: 5 (lower is better)
Translates to: LHAHQTMGWPSWETCRARLTNSQ*ALRASR
Trigger: CCTGCTCGCTCTCAGAGCCAACTGTGAGTTTGTCAG...CCTGGCCCTGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR CAA 90 bp AGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGGCCATGGTGATCCGTaGTCTCCGACCAGGGTTGAA +
Preference number: 5 (lower is better)
Translates to: SAQEVAAGSGEFLFQGHQGHGDP*SPTRVE
Trigger: TTCAACCCTGGTCGGAGACAACGGATCACCATGGCC...CTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp TCAAAGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATGCAACAGTGGGGTGTaGGGGTCTCGGAGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: SKCTGGGSRVRRVPVPGTCNSGV*GSRRSC
Trigger: GCAGCTTCTCCGAGACCCCAACACCCCACTGTTGCA...TGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp GGCCAGAAAGACTTCCCAGGGAAGATGCTTGGCTCTCTGCTCCAAGGTGGGCCAGCTGAGGAGGCCTTCTaGCAGGACCCCAACCACAGA +
Preference number: 5 (lower is better)
Translates to: GQKDFPGKMLGSLLQGGPAEEAF*QDPNHR
Trigger: TCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGC...TGGCCCACCTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGAAGTCTTTCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS TCA 90 bp TGTCTCTCCCGAGGGAACCCTCTCCTCTGTTCCCCGTCTCTTCTGTaGCCCTGTTATCAGGCATGTGAGGTTGGGTGGGGTGAGGACTGG +
Preference number: 5 (lower is better)
Translates to: CLSRGNPLLCSPSLL*PCYQACEVGWGEDW
Trigger: CCAGTCCTCACCCCACCCAACCTCACATGCCTGATAACAGGGTCACAGAAGAGACGGGGAACAGAGGAGAGGGTTCCCTCGGGAGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471659.1
CDS CCA 90 bp TGGTCCCAGCCTGCAGACTGGAGAGGCGTAGGCCCACATAGATGCTaGGGTTCAAGTGCTCCAGGGAAAGCCGGTCCATCCAAGGTAAGA +
Preference number: 5 (lower is better)
Translates to: WSQPADWRGVGPHRC*GSSAPGKAGPSKVR
Trigger: TCTTACCTTGGATGGACCGGCTTTCCCTGGAGCACTTGAACCCCAGCATCTATGTGGGCCTACGCCTCTCCAGTCTGCAGGCTGGGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000423350.1
ENST00000450638.5
CDS CCA 90 bp CATCCAGAGTGTCAGGCCATGACTCACCTTGCAACAGTGGGGTGTTaGGGTCTCGGAGAAGCTGCCAGAACTCCCTTTCTCCGGCCGCTT +
Preference number: 5 (lower is better)
Translates to: HPECQAMTHLATVGC*GLGEAARTPFLRPL
Trigger: AAGCGGCCGGAGAAAGGGAGTTCTGGCAGCTTCTCCGAGACCCCAACACCCCACTGTTGCAAGGTGAGTCATGGCCTGACACTCTGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493542.1
CDS-3UTR CAA 90 bp TTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGTCCTCCAGGAACCATTaGAGCTGTGAGACCAGCCTG +
Preference number: 5 (lower is better)
Translates to: LQDPNHRTSGLHNTCGLRSSRNH*SCETSL
Trigger: CAGGCTGGTCTCACAGCTCAAATGGTTCCTGGAGGA...CCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR CAA 90 bp CTCCAAGGTGGGCCATGGTATAGGGCCCTCGAAGGGCTTGTGGCTGGGGTGATCTGTCTCCGACCAGGGTaGAAGTTTGAGCGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: LQGGPWYRALEGLVAGVICLRPG*KFERFR
Trigger: TCTGAAGCGCTCAAACTTCAACCCTGGTCGGAGACA...GATCACCCCAGCCACAAGCCCTTCGAGGGCCCTATACCATGGCCCACCTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp CCCCAATGCCCACATGGCGGCTCAGGCACCCTCCACTCCTCCCTGATGGGGTTAGACACTGATGATCTCTaGGGTCTGAGGAATGGTCTC +
Preference number: 5 (lower is better)
Translates to: PQCPHGGSGTLHSSLMGLDTDDL*GLRNGL
Trigger: GAGACCATTCCTCAGACCCAAGAGATCATCAGTGTC...TAACCCCATCAGGGAGGAGTGGAGGGTGCCTGAGCCGCCATGTGGGCATTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS-3UTR CAA 90 bp GCCCTCGAAGGGCTTGTGGCTGGGGTGATCCCAGGGGGCATTGCTCAAAGTGCAGTAGTCAGCAATACCTaGCAACAGTGGGGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: ALEGLVAGVIPGGIAQSAVVSNT*QQWGVG
Trigger: CCCAACACCCCACTGTTGCAAGGTATTGCTGACTAC...TGCACTTTGAGCAATGCCCCCTGGGATCACCCCAGCCACAAGCCCTTCGAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp CCCGGGCTGAGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCGTAGTCAGCAATACCTaGCAACAGTGGGGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: PGLRRPSCRTPTTERVVFVVSNT*QQWGVG
Trigger: CCCAACACCCCACTGTTGCAAGGTATTGCTGACTAC...GAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGCCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp CTGAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCAGCTGAGGAGGCCTTCTaGCAGGACCCCAACCACAGA +
Preference number: 5 (lower is better)
Translates to: LRCFMPIRPWGGLHGRPAAEEAF*QDPNHR
Trigger: TCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCTCAGC...TGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS GCA 90 bp TCCATCCTGCAGACTGGCCAGCAAAGCAACCCTCGCCTTGAGACATaGTGTTCCCAGTTCTGCCCCACGCATGGGGGAAGTCATGAGGAA +
Preference number: 5 (lower is better)
Translates to: SILQTGQQSNPRLET*CSQFCPTHGGSHEE
Trigger: TTCCTCATGACTTCCCCCATGCGTGGGGCAGAACTGGGAACAGCATGTCTCAAGGCGAGGGTTGCTTTGCTGGCCAGTCTGCAGGATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS CCA 90 bp GTGAGGACTGGGAGGTGGGAGTCTCACGTGAATCCTCCTAACTCATaGGCCTTCTTCAGGACATCTTCCACGGTGGACCCGGCCAGAACA +
Preference number: 5 (lower is better)
Translates to: VRTGRWESHVNPPNS*AFFRTSSTVDPART
Trigger: TGTTCTGGCCGGGTCCACCGTGGAAGATGTCCTGAAGAAGGCCCATGAGTTAGGAGGATTCACGTGAGACTCCCACCTCCCAGTCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471659.1
CDS-3UTR CAA 90 bp CCAAGGAGTCTGAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGGGCCATGGTGATCCGTaGTCTCCGACCAGGGTTGAA +
Preference number: 5 (lower is better)
Translates to: PRSLRCFMPIRPWGGLHGGHGDP*SPTRVE
Trigger: TTCAACCCTGGTCGGAGACAACGGATCACCATGGCC...CCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTCAGACTCCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp GCTCAAAGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGAAAAGCAACCCTCGCCTaGAGACATGCTGTTCCCAGT +
Preference number: 5 (lower is better)
Translates to: AQSAQEVAAGSGEFLFQGKATLA*RHAVPS
Trigger: ACTGGGAACAGCATGTCTCAAGGCGAGGGTTGCTTT...TCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp CAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACATCAGGAGGGAGACACTGATGATCTCTaGGGTCTGAGGAATGGTCTC +
Preference number: 5 (lower is better)
Translates to: QEVAAGSGEFLFQGHQEGDTDDL*GLRNGL
Trigger: GAGACCATTCCTCAGACCCAAGAGATCATCAGTGTC...TCCCTCCTGATGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp GCCCTCGAAGGGCTTGTGGCTGGGGTGATCCCAGGGGGCATTGCTCAAAGTGCAGACACTGATGATCTCTaGGGTCTGAGGAATGGTCTC +
Preference number: 5 (lower is better)
Translates to: ALEGLVAGVIPGGIAQSADTDDL*GLRNGL
Trigger: GAGACCATTCCTCAGACCCAAGAGATCATCAGTGTC...TGCACTTTGAGCAATGCCCCCTGGGATCACCCCAGCCACAAGCCCTTCGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp CCAAGGAGTCTGAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGTCCCAGGGAAGATGCTaGGCTCTCTGCTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: PRSLRCFMPIRPWGGLHGSQGRC*ALCSKV
Trigger: CACCTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGA...CCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTCAGACTCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp GAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCTCCCAGGGAAGATGCTaGGCTCTCTGCTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: EAFLQDPNHRTSGLHNTCSQGRC*ALCSKV
Trigger: CACCTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGA...GCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp CAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGTTTTTCCAGGCTGGCCAGACTaGGCCAGAAAGACTTCCCAG +
Preference number: 5 (lower is better)
Translates to: QPQNEWSSQHLRPADSVFPGWPD*ARKTSQ
Trigger: CTGGGAAGTCTTTCTGGCCAAGTCTGGCCAGCCTGG...AAAAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS CCA 90 bp TTGTGGTTCAGAACGGGCAGCAGCTGGGAAATCATGAGAGCATTCTaGAAGGCTCCATCCTGCAGACTGGCCAGCAAAGCAACCCTCGCC +
Preference number: 5 (lower is better)
Translates to: LWFRTGSSWEIMRAF*KAPSCRLASKATLA
Trigger: GGCGAGGGTTGCTTTGCTGGCCAGTCTGCAGGATGGAGCCTTCCAGAATGCTCTCATGATTTCCCAGCTGCTGCCCGTTCTGAACCACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS CCA 90 bp CCTGTTATCAGGCATGTGAGGTTGGGTGGGGTGAGGACTGGGAGGTaGGAGTCTCACGTGAATCCTCCTAACTCATGGGCCTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: PVIRHVRLGGVRTGR*ESHVNPPNSWAFFR
Trigger: CCTGAAGAAGGCCCATGAGTTAGGAGGATTCACGTGAGACTCCCACCTCCCAGTCCTCACCCCACCCAACCTCACATGCCTGATAACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471659.1
CDS CCA 90 bp GGCTCTGCCTCCAAAGCCTGCTCTCTCAGTGACAATGCTGGCCTATaGCTCCCTGTTTCCATAACACCGTGGGCAAGAAAGGAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: GSASKACSLSDNAGL*LPVSITPWARKELS
Trigger: GCTCAGCTCCTTTCTTGCCCACGGTGTTATGGAAACAGGGAGCCATAGGCCAGCATTGTCACTGAGAGAGCAGGCTTTGGAGGCAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471659.1
CDS-3UTR CAA 90 bp GAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCTCCTCCAGGAACCATTaGAGCTGTGAGACCAGCCTG +
Preference number: 5 (lower is better)
Translates to: EAFLQDPNHRTSGLHNTCSSRNH*SCETSL
Trigger: CAGGCTGGTCTCACAGCTCAAATGGTTCCTGGAGGA...GCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS-3UTR CAA 90 bp AGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCACAGCATACAGAAGTTaGTCCACCACGCTGTCATGG +
Preference number: 5 (lower is better)
Translates to: RTPTTERVVFTTPAACGLTAYRS*STTLSW
Trigger: CCATGACAGCGTGGTGGACAAACTTCTGTATGCTGT...GAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp TCAAAGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACAGTAGTCAGCAATACCTaGCAACAGTGGGGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: SKCTGGGSRVRRVPVPGTVVSNT*QQWGVG
Trigger: CCCAACACCCCACTGTTGCAAGGTATTGCTGACTAC...TGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp AGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTTCCCAGGGAAGATGCTaGGCTCTCTGCTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: RRPSCRTPTTERVVFTTPSQGRC*ALCSKV
Trigger: CACCTTGGAGCAGAGAGCCAAGCATCTTCCCTGGGA...AGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS TCA 90 bp TCTGATGGCCATGGTGATCCGTTGTCTCCGACCAGGGTTGAAGTTTaGGCGCTTCAGACAGGTGAATGCCAAGCCTGCCATGGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: SDGHGDPLSPTRVEV*ALQTGECQACHGCC
Trigger: ACAGCAGCCATGGCAGGCTTGGCATTCACCTGTCTGAAGCGCTCAAACTTCAACCCTGGTCGGAGACAACGGATCACCATGGCCATCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp GAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCAGGACAGCATACAGAAGTTaGTCCACCACGCTGTCATGG +
Preference number: 5 (lower is better)
Translates to: EMLHAHQTMGWPSWETCRTAYRS*STTLSW
Trigger: CCATGACAGCGTGGTGGACAAACTTCTGTATGCTGT...CCTGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp CTGAGATGCTTCATGCCCATCAGACCATGGGGTGGCCTTCATGGGAGACCTGCATGTCTCCGACCAGGGTaGAAGTTTGAGCGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: LRCFMPIRPWGGLHGRPACLRPG*KFERFR
Trigger: TCTGAAGCGCTCAAACTTCAACCCTGGTCGGAGACA...TGCAGGTCTCCCATGAAGGCCACCCCATGGTCTGATGGGCATGAAGCATCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp GAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCTGTCTCCGACCAGGGTaGAAGTTTGAGCGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: EAFLQDPNHRTSGLHNTCCLRPG*KFERFR
Trigger: TCTGAAGCGCTCAAACTTCAACCCTGGTCGGAGACA...GCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp GAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCAAAGCAACCCTCGCCTaGAGACATGCTGTTCCCAGT +
Preference number: 5 (lower is better)
Translates to: EAFLQDPNHRTSGLHNTCKATLA*RHAVPS
Trigger: ACTGGGAACAGCATGTCTCAAGGCGAGGGTTGCTTT...GCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp TCAAAGTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACAGACACTGATGATCTCTaGGGTCTGAGGAATGGTCTC +
Preference number: 5 (lower is better)
Translates to: SKCTGGGSRVRRVPVPGTDTDDL*GLRNGL
Trigger: GAGACCATTCCTCAGACCCAAGAGATCATCAGTGTC...TGTCCCTGGAACAGGAACTCGCCTGACCCTGCTGCCACCTCCTGTGCACTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp CCAACCACAGAACGAGTGGTCTTCACAACACCTGCGGCCTGCGGACTCCGTTTTGTAGTCAGCAATACCTaGCAACAGTGGGGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: PTTERVVFTTPAACGLRFVVSNT*QQWGVG
Trigger: CCCAACACCCCACTGTTGCAAGGTATTGCTGACTAC...AAAACGGAGTCCGCAGGCCGCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp GAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTGCCTTCCAGCTGGTGAATaGAGGCTGCCTGGTGAACTT +
Preference number: 5 (lower is better)
Translates to: EAFLQDPNHRTSGLHNTCLPAGE*RLPGEL
Trigger: AAGTTCACCAGGCAGCCTCAATTCACCAGCTGGAAG...GCAGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450638.5
CDS TCA 90 bp CAATGTAGGTCTTGTGGTTCAGAACGGGCAGCAGCTGGGAAATCATaGGAGCATTCTGGAAGGCTCCATCCTGCAGACTGGCCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: QCRSCGSERAAAGKS*EHSGRLHPADWPAK
Trigger: CTTTGCTGGCCAGTCTGCAGGATGGAGCCTTCCAGAATGCTCTCATGATTTCCCAGCTGCTGCCCGTTCTGAACCACAAGACCTACATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS TCA 90 bp AAGAGACTAAGCACCTGCAGCGTGACACTGATGATCTCTTGGGTCTaGGGAATGGTCTCAGCAGCTGGTTCCAACATGACTCGTGGTGCC +
Preference number: 5 (lower is better)
Translates to: KRLSTCSVTLMISWV*GMVSAAGSNMTRGA
Trigger: GGCACCACGAGTCATGTTGGAACCAGCTGCTGAGACCATTCCTCAGACCCAAGAGATCATCAGTGTCACGCTGCAGGTGCTTAGTCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
ENST00000471659.1
ENST00000493542.1
CDS-3UTR CAA 90 bp AGGAGGCCTTCTTGCAGGACCCCAACCACAGAACGAGTGGTCTTCACAACACCTACAGCATACAGAAGTTaGTCCACCACGCTGTCATGG +
Preference number: 5 (lower is better)
Translates to: RRPSCRTPTTERVVFTTPTAYRS*STTLSW
Trigger: CCATGACAGCGTGGTGGACAAACTTCTGTATGCTGT...AGGTGTTGTGAAGACCACTCGTTCTGTGGTTGGGGTCCTGCAAGAAGGCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS-3UTR CAA 90 bp CACTGTAGCAGGTCCACAGGCCATCAATGCTTTAATTTTGTCAGAGGCAGGCACGGCCATGGTGATCCGTaGTCTCCGACCAGGGTTGAA +
Preference number: 5 (lower is better)
Translates to: HCSRSTGHQCFNFVRGRHGHGDP*SPTRVE
Trigger: TTCAACCCTGGTCGGAGACAACGGATCACCATGGCC...GTGCCTGCCTCTGACAAAATTAAAGCATTGATGGCCTGTGGACCTGCTACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS-3UTR CAA 90 bp GTCATAGTAGTGGGTGCTCAGTCAGTAGTCAATGTCATCACTGCTGGCATTCCCACAGCATACAGAAGTTaGTCCACCACGCTGTCATGG +
Preference number: 5 (lower is better)
Translates to: VIVVGAQSVVNVITAGIPTAYRS*STTLSW
Trigger: CCATGACAGCGTGGTGGACAAACTTCTGTATGCTGT...GGGAATGCCAGCAGTGATGACATTGACTACTGACTGAGCACCCACTACTATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215838.8
CDS GCA 90 bp AAACTTCCAGCTGGTGAATTGAGGCTGCCTGGTGAACTTCCTCCATaGAGATCTCAAAATAACGCCTTTCCTGCCATCTCACACATCTCA +
Preference number: 5 (lower is better)
Translates to: KLPAGELRLPGELPP*RSQNNAFPAISHIS
Trigger: TGAGATGTGTGAGATGGCAGGAAAGGCGTTATTTTGAGATCTGCATGGAGGAAGTTCACCAGGCAGCCTCAATTCACCAGCTGGAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450638.5
CDS TCA 90 bp TCTAAGGCTTCAGTTCAATATATTATATCCAACTTTGAGCATCAGTaGTTTTGTGAAGGTGTGGCCCAGGAGGGTGCTAGGGAAAGCTGG +
Preference number: 5 (lower is better)
Translates to: SKASVQYIISNFEHQ*FCEGVAQEGARESW
Trigger: CCAGCTTTCCCTAGCACCCTCCTGGGCCACACCTTCACAAAATCACTGATGCTCAAAGTTGGATATAATATATTGAACTGAAGCCTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493542.1
CDS GCA 72 bp CAGCCTGCAGACTGGAGAGGCGTAGGCCCACATAGATaGTGGGGTTCAAGTGCTCCAGGGAAAGCCGGTCCA +
Preference number: 6 (lower is better)
Translates to: QPADWRGVGPHR*WGSSAPGKAGP
Trigger: TGGACCGGCTTTCCCTGGAGCACTTGAACCCCAGCATCTATGTGGGCCTACGCCTCTCCAGTCTGCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000423350.1
ENST00000450638.5
CDS CAA 90 bp TGGAAGGCTCCATCCTGCAGACTGGCCAGCAAAGCAACCCTCGCCTaGAGACATGCTGTTCCCAGTTCTGCCCCACGCATGGGGGAAGTC +
Preference number: 6 (lower is better)
Translates to: WKAPSCRLASKATLA*RHAVPSSAPRMGEV
Trigger: GACTTCCCCCATGCGTGGGGCAGAACTGGGAACAGCATGTCTCAAGGCGAGGGTTGCTTTGCTGGCCAGTCTGCAGGATGGAGCCTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS GCA 72 bp CAGACTGGCCAGCAAAGCAACCCTCGCCTTGAGACATaGTGTTCCCAGTTCTGCCCCACGCATGGGGGAAGT +
Preference number: 6 (lower is better)
Translates to: QTGQQSNPRLET*CSQFCPTHGGS
Trigger: ACTTCCCCCATGCGTGGGGCAGAACTGGGAACAGCATGTCTCAAGGCGAGGGTTGCTTTGCTGGCCAGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS CCA 72 bp GCAGGTAGAGGTCTTCCTTGGTCCCAGCCTGCAGACTaGAGAGGCGTAGGCCCACATAGATGCTGGGGTTCA +
Preference number: 6 (lower is better)
Translates to: AGRGLPWSQPAD*RGVGPHRCWGS
Trigger: TGAACCCCAGCATCTATGTGGGCCTACGCCTCTCCAGTCTGCAGGCTGGGACCAAGGAAGACCTCTACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000423350.1
ENST00000450638.5
CDS CCA 72 bp AGTTTGTCCACCACGCTGTCATGGACCCGCTTCTGGTaGAGACACAGGGCCAGAATGCCCAGGCCATACTGG +
Preference number: 6 (lower is better)
Translates to: SLSTTLSWTRFW*RHRARMPRPYW
Trigger: CCAGTATGGCCTGGGCATTCTGGCCCTGTGTCTCCACCAGAAGCGGGTCCATGACAGCGTGGTGGACAAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS CAA 72 bp CCATCCTGCAGACTGGCCAGCAAAGCAACCCTCGCCTaGAGACATGCTGTTCCCAGTTCTGCCCCACGCATG +
Preference number: 6 (lower is better)
Translates to: PSCRLASKATLA*RHAVPSSAPRM
Trigger: CATGCGTGGGGCAGAACTGGGAACAGCATGTCTCAAGGCGAGGGTTGCTTTGCTGGCCAGTCTGCAGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS CAA 90 bp ACATCCAGAGTGTCAGGCCATGACTCACCTTGCAACAGTGGGGTGTaGGGGTCTCGGAGAAGCTGCCAGAACTCCCTTTCTCCGGCCGCT +
Preference number: 6 (lower is better)
Translates to: TSRVSGHDSPCNSGV*GSRRSCQNSLSPAA
Trigger: AGCGGCCGGAGAAAGGGAGTTCTGGCAGCTTCTCCGAGACCCCAACACCCCACTGTTGCAAGGTGAGTCATGGCCTGACACTCTGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493542.1
CDS CAA 90 bp TCATCCTCCAGGAACCATTTGAGCTGTGAGACCAGCCTGTCCCCCTaGTGGCCCCTGACAAACTCACAGTTGGCTCTGAGAGCGAGCAGG +
Preference number: 6 (lower is better)
Translates to: SSSRNHLSCETSLSP*WPLTNSQLALRASR
Trigger: CCTGCTCGCTCTCAGAGCCAACTGTGAGTTTGTCAGGGGCCACAAGGGGGACAGGCTGGTCTCACAGCTCAAATGGTTCCTGGAGGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS TCA 72 bp AGGCAGACCCTAGGAGGCACTGCTGGTAACCAAGCTTaGGGCTGTGCAGGTAGAGGTCTTCCTTGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: RQTLGGTAGNQA*GCAGRGLPWSQ
Trigger: CTGGGACCAAGGAAGACCTCTACCTGCACAGCCTCAAGCTTGGTTACCAGCAGTGCCTCCTAGGGTCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000407817.3
ENST00000450638.5
CDS TCA 72 bp CATCCTCGCCTAGGAGGCACTGCTGGTAACCAAGCTTaGGGCTGTGCAGGTAGAGGTCTTCCTTGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: HPRLGGTAGNQA*GCAGRGLPWSQ
Trigger: CTGGGACCAAGGAAGACCTCTACCTGCACAGCCTCAAGCTTGGTTACCAGCAGTGCCTCCTAGGCGAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405742.7
CDS TCA 72 bp CGAGGGAACCCTCTCCTCTGTTCCCCGTCTCTTCTGTaGCCCTGTTATCAGGCATGTGAGGTTGGGTGGGGT +
Preference number: 6 (lower is better)
Translates to: RGNPLLCSPSLL*PCYQACEVGWG
Trigger: ACCCCACCCAACCTCACATGCCTGATAACAGGGTCACAGAAGAGACGGGGAACAGAGGAGAGGGTTCCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471659.1
CDS CCA 72 bp GGGAGGTGGGAGTCTCACGTGAATCCTCCTAACTCATaGGCCTTCTTCAGGACATCTTCCACGGTGGACCCG +
Preference number: 6 (lower is better)
Translates to: GRWESHVNPPNS*AFFRTSSTVDP
Trigger: CGGGTCCACCGTGGAAGATGTCCTGAAGAAGGCCCATGAGTTAGGAGGATTCACGTGAGACTCCCACCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471659.1
CDS CAA 72 bp TGCCCAATGGCTCTCTTCTCATCCTCCAGGAACCATTaGAGCTGTGAGACCAGCCTGTCCCCCTTGTGGCCC +
Preference number: 6 (lower is better)
Translates to: CPMALFSSSRNH*SCETSLSPLWP
Trigger: GGGCCACAAGGGGGACAGGCTGGTCTCACAGCTCAAATGGTTCCTGGAGGATGAGAAGAGAGCCATTGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS TCA 72 bp GGCAATACCCTAGGAGGCACTGCTGGTAACCAAGCTTaGGGCTGTGCAGGTAGAGGTCTTCCTTGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: GNTLGGTAGNQA*GCAGRGLPWSQ
Trigger: CTGGGACCAAGGAAGACCTCTACCTGCACAGCCTCAAGCTTGGTTACCAGCAGTGCCTCCTAGGGTATTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423350.1
CDS CCA 72 bp AACCATTTGAGCTGTGAGACCAGCCTGTCCCCCTTGTaGCCCCTGACAAACTCACAGTTGGCTCTGAGAGCG +
Preference number: 6 (lower is better)
Translates to: NHLSCETSLSPL*PLTNSQLALRA
Trigger: CGCTCTCAGAGCCAACTGTGAGTTTGTCAGGGGCCACAAGGGGGACAGGCTGGTCTCACAGCTCAAATGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS CAA 72 bp TGGCCCTGGTGGAAAGGTTCCACAGCATACAGAAGTTaGTCCACCACGCTGTCATGGACCCGCTTCTGGTGG +
Preference number: 6 (lower is better)
Translates to: WPWWKGSTAYRS*STTLSWTRFWW
Trigger: CCACCAGAAGCGGGTCCATGACAGCGTGGTGGACAAACTTCTGTATGCTGTGGAACCTTTCCACCAGGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS CAA 90 bp ACAGAATGGTGGCCCTGGTGGAAAGGTTCCACAGCATACAGAAGTTaGTCCACCACGCTGTCATGGACCCGCTTCTGGTGGAGACACAGG +
Preference number: 6 (lower is better)
Translates to: TEWWPWWKGSTAYRS*STTLSWTRFWWRHR
Trigger: CCTGTGTCTCCACCAGAAGCGGGTCCATGACAGCGTGGTGGACAAACTTCTGTATGCTGTGGAACCTTTCCACCAGGGCCACCATTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS CAA 90 bp CGCACTGTTCTGATGGCCATGGTGATCCGTTGTCTCCGACCAGGGTaGAAGTTTGAGCGCTTCAGACAGGTGAATGCCAAGCCTGCCATG +
Preference number: 6 (lower is better)
Translates to: RTVLMAMVIRCLRPG*KFERFRQVNAKPAM
Trigger: CATGGCAGGCTTGGCATTCACCTGTCTGAAGCGCTCAAACTTCAACCCTGGTCGGAGACAACGGATCACCATGGCCATCAGAACAGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS CAA 90 bp CGGCGGCAAGAGACTAAGCACCTGCAGCGTGACACTGATGATCTCTaGGGTCTGAGGAATGGTCTCAGCAGCTGGTTCCAACATGACTCG +
Preference number: 6 (lower is better)
Translates to: RRQETKHLQRDTDDL*GLRNGLSSWFQHDS
Trigger: CGAGTCATGTTGGAACCAGCTGCTGAGACCATTCCTCAGACCCAAGAGATCATCAGTGTCACGCTGCAGGTGCTTAGTCTCTTGCCGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
ENST00000471659.1
ENST00000493542.1
CDS TCA 72 bp CTGGTCACCGCTCCGAGAGACGCAGCTTCCTGTCACTaGTTAATCCTCCATGCCTGCAATGCACGGCTAAGT +
Preference number: 6 (lower is better)
Translates to: LVTAPRDAASCH*LILHACNARLS
Trigger: ACTTAGCCGTGCATTGCAGGCATGGAGGATTAATCAGTGACAGGAAGCTGCGTCTCTCGGAGCGGTGACCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000423350.1
ENST00000450638.5
CDS GCA 72 bp GAGAGACGCAGCTTCCTGTCACTGATTAATCCTCCATaGCTGCAATGCACGGCTAAGTCTGCAGAGGGGTGG +
Preference number: 6 (lower is better)
Translates to: ERRSFLSLINPP*LQCTAKSAEGW
Trigger: CCACCCCTCTGCAGACTTAGCCGTGCATTGCAGGCATGGAGGATTAATCAGTGACAGGAAGCTGCGTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405742.7
ENST00000423350.1
ENST00000450638.5
CDS CCA 72 bp TCCAGGGAAAGCCGGTCCATCCAAGGTAAGAGGTGCTaGCCCAACTTCTCTACCAGATGGCTGTCCATCTCT +
Preference number: 6 (lower is better)
Translates to: SRESRSIQGKRC*PNFSTRWLSIS
Trigger: AGAGATGGACAGCCATCTGGTAGAGAAGTTGGGCCAGCACCTCTTACCTTGGATGGACCGGCTTTCCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000423350.1
ENST00000450638.5
CDS CCA 72 bp TCCACAGCATACAGAAGTTTGTCCACCACGCTGTCATaGACCCGCTTCTGGTGGAGACACAGGGCCAGAATG +
Preference number: 6 (lower is better)
Translates to: STAYRSLSTTLS*TRFWWRHRARM
Trigger: CATTCTGGCCCTGTGTCTCCACCAGAAGCGGGTCCATGACAGCGTGGTGGACAAACTTCTGTATGCTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS CCA 72 bp AGAACGGGCAGCAGCTGGGAAATCATGAGAGCATTCTaGAAGGCTCCATCCTGCAGACTGGCCAGCAAAGCA +
Preference number: 6 (lower is better)
Translates to: RTGSSWEIMRAF*KAPSCRLASKA
Trigger: TGCTTTGCTGGCCAGTCTGCAGGATGGAGCCTTCCAGAATGCTCTCATGATTTCCCAGCTGCTGCCCGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS CCA 72 bp CTAACTCATGGGCCTTCTTCAGGACATCTTCCACGGTaGACCCGGCCAGAACAGAGATGGACTGTCTGTACG +
Preference number: 6 (lower is better)
Translates to: LTHGPSSGHLPR*TRPEQRWTVCT
Trigger: CGTACAGACAGTCCATCTCTGTTCTGGCCGGGTCCACCGTGGAAGATGTCCTGAAGAAGGCCCATGAGTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
ENST00000471659.1
ENST00000493542.1
CDS CAA 72 bp AGGAACCATTTGAGCTGTGAGACCAGCCTGTCCCCCTaGTGGCCCCTGACAAACTCACAGTTGGCTCTGAGA +
Preference number: 6 (lower is better)
Translates to: RNHLSCETSLSP*WPLTNSQLALR
Trigger: TCTCAGAGCCAACTGTGAGTTTGTCAGGGGCCACAAGGGGGACAGGCTGGTCTCACAGCTCAAATGGTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000450638.5
CDS CCA 72 bp GATGATCTCTTGGGTCTGAGGAATGGTCTCAGCAGCTaGTTCCAACATGACTCGTGGTGCCAGACAGTCTGG +
Preference number: 6 (lower is better)
Translates to: DDLLGLRNGLSS*FQHDSWCQTVW
Trigger: CCAGACTGTCTGGCACCACGAGTCATGTTGGAACCAGCTGCTGAGACCATTCCTCAGACCCAAGAGATCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
ENST00000471659.1
ENST00000493542.1
CDS CAA 72 bp CTGATGGCCATGGTGATCCGTTGTCTCCGACCAGGGTaGAAGTTTGAGCGCTTCAGACAGGTGAATGCCAAG +
Preference number: 6 (lower is better)
Translates to: LMAMVIRCLRPG*KFERFRQVNAK
Trigger: CTTGGCATTCACCTGTCTGAAGCGCTCAAACTTCAACCCTGGTCGGAGACAACGGATCACCATGGCCATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
CDS TCA 72 bp AGCACCTGCAGCGTGACACTGATGATCTCTTGGGTCTaGGGAATGGTCTCAGCAGCTGGTTCCAACATGACT +
Preference number: 6 (lower is better)
Translates to: STCSVTLMISWV*GMVSAAGSNMT
Trigger: AGTCATGTTGGAACCAGCTGCTGAGACCATTCCTCAGACCCAAGAGATCATCAGTGTCACGCTGCAGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
ENST00000471659.1
ENST00000493542.1
CDS TCA 72 bp GGGAACAAAGGGAGGAGGAGGGCTAGTGGGACCATGTaGGACATCTTGAGGCCATTCACGTTCCTGCTTAAA +
Preference number: 6 (lower is better)
Translates to: GNKGRRRASGTM*DILRPFTFLLK
Trigger: TTTAAGCAGGAACGTGAATGGCCTCAAGATGTCTCACATGGTCCCACTAGCCCTCCTCCTCCCTTTGTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423350.1
CDS CCA 72 bp GAGGCCTGTGTTTCATATGTGAATCCTCCTAACTCATaGGCCTTCTTCAGGACATCTTCCACGGTGGACCCG +
Preference number: 6 (lower is better)
Translates to: EACVSYVNPPNS*AFFRTSSTVDP
Trigger: CGGGTCCACCGTGGAAGATGTCCTGAAGAAGGCCCATGAGTTAGGAGGATTCACATATGAAACACAGGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215838.8
ENST00000405742.7
ENST00000407817.3
ENST00000450638.5
ENST00000493542.1
CDS GCA 72 bp GCTGGTGAATTGAGGCTGCCTGGTGAACTTCCTCCATaGAGATCTCAAAATAACGCCTTTCCTGCCATCTCA +
Preference number: 6 (lower is better)
Translates to: AGELRLPGELPP*RSQNNAFPAIS
Trigger: TGAGATGGCAGGAAAGGCGTTATTTTGAGATCTGCATGGAGGAAGTTCACCAGGCAGCCTCAATTCACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450638.5
CDS CAA 72 bp CAAATTTCCAAACAACGCAAACTTCCAGCTGGTGAATaGAGGCTGCCTGGTGAACTTCCTCCATGCAGATCT +
Preference number: 6 (lower is better)
Translates to: QISKQRKLPAGE*RLPGELPPCRS
Trigger: AGATCTGCATGGAGGAAGTTCACCAGGCAGCCTCAATTCACCAGCTGGAAGTTTGCGTTGTTTGGAAATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450638.5
CDS TCA 72 bp TCAGTTCAATATATTATATCCAACTTTGAGCATCAGTaGTTTTGTGAAGGTGTGGCCCAGGAGGGTGCTAGG +
Preference number: 6 (lower is better)
Translates to: SVQYIISNFEHQ*FCEGVAQEGAR
Trigger: CCTAGCACCCTCCTGGGCCACACCTTCACAAAATCACTGATGCTCAAAGTTGGATATAATATATTGAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493542.1