RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TCL1A (Homo sapiens)

Ensembl gene IDs: ENSG00000100721

Ensembl transcript IDs: ENST00000402399.6, ENST00000554012.5, ENST00000554119.5, ENST00000555202.1, ENST00000555886.5, ENST00000556156.1, ENST00000556450.5, ENST00000557043.4

Found 343 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGGCCTCCTGCTaGGTCCCGGGATGTGGACCACTGACCCAGAGGCTTCTGAGTCCT +
Preference number: 1 (lower is better)
Translates to: GSEGSSTGLAGLASC*VPGCGPLTQRLLSP
Trigger: AGGACTCAGAAGCCTCTGGGTCAGTGGTCCACATCCCGGGACGCAGCAGGAGGCCAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
3UTR GCA 90 bp AAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGGCCTCCTaGTGCGTCCCGGGATGTGGACCACTGACCCAGAGGCTTCTGAGT +
Preference number: 1 (lower is better)
Translates to: KGSEGSSTGLAGLAS*CVPGCGPLTQRLLS
Trigger: ACTCAGAAGCCTCTGGGTCAGTGGTCCACATCCCGGGACGCAGCAGGAGGCCAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
3UTR TCA 90 bp AAACCCAACCTCTATCCCTTTTCCACGTGGGCAAGCCAAGGGTTCTaGGGGCTCATCCACAGGGCTCGCCGGCCTGGCCTCCTGCTGCGT +
Preference number: 1 (lower is better)
Translates to: KPNLYPFSTWASQGF*GLIHRARRPGLLLR
Trigger: ACGCAGCAGGAGGCCAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCCACGTGGAAAAGGGATAGAGGTTGGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
3UTR CCA 90 bp GTATCGTCCATCAGGGTAGAGCTGCCACATGATAGGCAGCAGGCTTaGGCCTATCTGGGTGGGGGTCATAGGCCTCCCCAGGACGACGTC +
Preference number: 1 (lower is better)
Translates to: VSSIRVELPHDRQQA*AYLGGGHRPPQDDV
Trigger: GACGTCGTCCTGGGGAGGCCTATGACCCCCACCCAGATAGGCCCAAGCCTGCTGCCTATCATGTGGCAGCTCTACCCTGATGGACGATAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
3UTR CCA 90 bp CTGAAGCTCACTTCCTTAGGCCATGCATGCTCCTCTCAGGGACTCTaGCTGGGCCAGGACCACCAGCACACACACGTGTCTAGCCACCCA +
Preference number: 1 (lower is better)
Translates to: LKLTSLGHACSSQGL*LGQDHQHTHVSSHP
Trigger: TGGGTGGCTAGACACGTGTGTGTGCTGGTGGTCCTGGCCCAGCCAGAGTCCCTGAGAGGAGCATGCATGGCCTAAGGAAGTGAGCTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
3UTR TCA 90 bp CTGCGTCCCGGGATGTGGACCACTGACCCAGAGGCTTCTGAGTCCTaGGCACAGATAAGGGCTCCTTTCAGGCCTTTCCTTGAGCTGCAC +
Preference number: 1 (lower is better)
Translates to: LRPGMWTTDPEASES*AQIRAPFRPFLELH
Trigger: GTGCAGCTCAAGGAAAGGCCTGAAAGGAGCCCTTATCTGTGCTCAGGACTCAGAAGCCTCTGGGTCAGTGGTCCACATCCCGGGACGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
3UTR GCA 90 bp GATGGTCATCACTGTTCCCTGAAGCTCACTTCCTTAGGCCATGCATaGTCCTCTCAGGGACTCTGGCTGGGCCAGGACCACCAGCACACA +
Preference number: 1 (lower is better)
Translates to: DGHHCSLKLTSLGHA*SSQGLWLGQDHQHT
Trigger: TGTGTGCTGGTGGTCCTGGCCCAGCCAGAGTCCCTGAGAGGAGCATGCATGGCCTAAGGAAGTGAGCTTCAGGGAACAGTGATGACCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
3UTR TCA 90 bp TCCTGCCAGCCATCCACCCATCTGGGCAGGGGTCCGAGTGTGAAATaGTGGTCATCACTGTTCCCTGAAGCTCACTTCCTTAGGCCATGC +
Preference number: 1 (lower is better)
Translates to: SCQPSTHLGRGPSVK*WSSLFPEAHFLRPC
Trigger: GCATGGCCTAAGGAAGTGAGCTTCAGGGAACAGTGATGACCATCATTTCACACTCGGACCCCTGCCCAGATGGGTGGATGGCTGGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
3UTR GCA 90 bp GGCGTAGCACCATGTGAGACCACTGGTCCAGGGTTTCAGAGGTCCTaGTCAGGTGAATCGGCTGTGTTCTCACAAGTTCACGGAGCTGAG +
Preference number: 1 (lower is better)
Translates to: GVAPCETTGPGFQRS*SGESAVFSQVHGAE
Trigger: CTCAGCTCCGTGAACTTGTGAGAACACAGCCGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGTGGTCTCACATGGTGCTACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
3UTR CCA 90 bp CTATCCTTTATTTCCTTAGGCCATGCATGCTCCTCTCAGGGACTCTaGCTGGGCCAGGACCACCAGCACACACACGTGTCTAGCCACCCA +
Preference number: 1 (lower is better)
Translates to: LSFISLGHACSSQGL*LGQDHQHTHVSSHP
Trigger: TGGGTGGCTAGACACGTGTGTGTGCTGGTGGTCCTGGCCCAGCCAGAGTCCCTGAGAGGAGCATGCATGGCCTAAGGAAATAAAGGATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555886.5
3UTR TCA 90 bp CAGACCCCAGCGTGGTGGAGAAGACACAGGCATAGTAAACGAAGGTaGACAGAAACACAACATCCCCATTGTAGGCTGGCCAGGCTCAGG +
Preference number: 1 (lower is better)
Translates to: QTPAWWRRHRHSKRR*TETQHPHCRLARLR
Trigger: CCTGAGCCTGGCCAGCCTACAATGGGGATGTTGTGTTTCTGTTCACCTTCGTTTACTATGCCTGTGTCTTCTCCACCACGCTGGGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000555886.5
ENST00000557043.4
3UTR GCA 90 bp TATCTGAGGAGAAGAAAAGGACAGGGCATACTTTCAGGTTCCGCTTaGCAGGGCTTCTCCAGGCGCAGAAAACCGGAATCCCTCCTGCCA +
Preference number: 1 (lower is better)
Translates to: YLRRRKGQGILSGSA*QGFSRRRKPESLLP
Trigger: TGGCAGGAGGGATTCCGGTTTTCTGCGCCTGGAGAAGCCCTGGCAAGCGGAACCTGAAAGTATGCCCTGTCCTTTTCTTCTCCTCAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
3UTR CCA 90 bp ACAGAAACACAACATCCCCATTGTAGGCTGGCCAGGCTCAGGCCCTaGGGTGAAAGGAGACAGGTGCTGCCAAGACCATACATCAGTCAT +
Preference number: 1 (lower is better)
Translates to: TETQHPHCRLARLRP*GERRQVLPRPYISH
Trigger: ATGACTGATGTATGGTCTTGGCAGCACCTGTCTCCTTTCACCCCAGGGCCTGAGCCTGGCCAGCCTACAATGGGGATGTTGTGTTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555886.5
ENST00000556156.1
3UTR TCA 90 bp CGGCTGTGTTCTCACAAGTTCACGGAGCTGAGTGGGTGTGCAACATaGAATACTAGTGCTGTGAGGGACAGAAGGGACAGAAAGAGGCTG +
Preference number: 1 (lower is better)
Translates to: RLCSHKFTELSGCAT*NTSAVRDRRDRKRL
Trigger: CAGCCTCTTTCTGTCCCTTCTGTCCCTCACAGCACTAGTATTTCATGTTGCACACCCACTCAGCTCCGTGAACTTGTGAGAACACAGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
3UTR TCA 90 bp TCTTCCCGACGCAAGAGCACCCGTAACTGTAACCTATCCTTTATCTaGGGAGAAGAAAAGGACAGGGCATACTTTCAGGTTCCGCTTGCC +
Preference number: 1 (lower is better)
Translates to: SSRRKSTRNCNLSFI*GEEKDRAYFQVPLA
Trigger: GGCAAGCGGAACCTGAAAGTATGCCCTGTCCTTTTCTTCTCCTCAGATAAAGGATAGGTTACAGTTACGGGTGCTCTTGCGTCGGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
3UTR-3UTR GCA 90 bp AGGCTTGGGCCTATCTGGGTGGGGGTCATAGGCCTCCCCAGGACGACGTCTTCCGCTACAGGCAGGTCCTaGAGGCCCTGGGTAGAGCTC +
Preference number: 2 (lower is better)
Translates to: RLGPIWVGVIGLPRTTSSATGRS*RPWVEL
Trigger: GAGCTCTACCCAGGGCCTGCAGGACCTGCCTGTAGC...GGAAGACGTCGTCCTGGGGAGGCCTATGACCCCCACCCAGATAGGCCCAAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554119.5
3UTR-3UTR CCA 90 bp GATAGGCAGCAGGCTTGGGCCTATCTGGGTGGGGGTCATAGGCCTCCCCAGGACGCCAGGCTCAGGCCCTaGGGTGAAAGGAGACAGGTG +
Preference number: 2 (lower is better)
Translates to: DRQQAWAYLGGGHRPPQDARLRP*GERRQV
Trigger: CACCTGTCTCCTTTCACCCCAGGGCCTGAGCCTGGC...GTCCTGGGGAGGCCTATGACCCCCACCCAGATAGGCCCAAGCCTGCTGCCTATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
3UTR-3UTR CCA 90 bp GGTTCCGCTTGCCAGGGCTTCTCCAGGCGCAGAAAACCGGAATCCCTCCTGCCAGCCAGGCTCAGGCCCTaGGGTGAAAGGAGACAGGTG +
Preference number: 2 (lower is better)
Translates to: GSACQGFSRRRKPESLLPARLRP*GERRQV
Trigger: CACCTGTCTCCTTTCACCCCAGGGCCTGAGCCTGGC...TGGCAGGAGGGATTCCGGTTTTCTGCGCCTGGAGAAGCCCTGGCAAGCGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
3UTR-3UTR TCA 90 bp AAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGGCCTCCTGCTAGACCATCATCCAGCTaGGAAAAGCCGAGGCACAGG +
Preference number: 2 (lower is better)
Translates to: KPRVLRAHPQGSPAWPPARPSSS*EKPRHR
Trigger: CCTGTGCCTCGGCTTTTCTCAGCTGGATGATGGTCT...AGCAGGAGGCCAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
3UTR-3UTR TCA 90 bp AAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGGCCTCCTGCTGAGGTCCTGCTCAGGTaGATCGGCTGTGTTCTCACA +
Preference number: 2 (lower is better)
Translates to: KPRVLRAHPQGSPAWPPAEVLLR*IGCVLT
Trigger: TGTGAGAACACAGCCGATTCACCTGAGCAGGACCTC...AGCAGGAGGCCAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
3UTR-3UTR TCA 90 bp CAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGGCCTCCTGCTTTCAGGCCTTTCCTTaGGCTGCACGTGAACCTGTG +
Preference number: 2 (lower is better)
Translates to: QAKGSEGSSTGLAGLASCFQAFP*AAREPV
Trigger: CACAGGTTCACGTGCAGCTCAAGGAAAGGCCTGAAA...GCAGGAGGCCAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
3UTR-3UTR CCA 90 bp CAGGTCCTGCAGGCCCTGGGTAGAGCTCATCCTCTGTCTGTCCATTCCTCCCAGCTCAGGGACTCTGGCTaGGCCAGGACCACCAGCACA +
Preference number: 2 (lower is better)
Translates to: QVLQALGRAHPLSVHSSQLRDSG*ARTTST
Trigger: TGTGCTGGTGGTCCTGGCCCAGCCAGAGTCCCTGAG...CTGGGAGGAATGGACAGACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000555886.5
3UTR-3UTR CCA 90 bp TCAGGTTCCGCTTGCCAGGGCTTCTCCAGGCGCAGAAAACCGGAATCCCTCCTGCTCAGGGACTCTGGCTaGGCCAGGACCACCAGCACA +
Preference number: 2 (lower is better)
Translates to: SGSACQGFSRRRKPESLLLRDSG*ARTTST
Trigger: TGTGCTGGTGGTCCTGGCCCAGCCAGAGTCCCTGAG...CAGGAGGGATTCCGGTTTTCTGCGCCTGGAGAAGCCCTGGCAAGCGGAACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
3UTR-3UTR CCA 90 bp AGGGTAGAGCTGCCACATGATAGGCAGCAGGCTTGGGCCTATCTGGGTGGGGGTTCCTCTCAGGGACTCTaGCTGGGCCAGGACCACCAG +
Preference number: 2 (lower is better)
Translates to: RVELPHDRQQAWAYLGGGSSQGL*LGQDHQ
Trigger: CTGGTGGTCCTGGCCCAGCCAGAGTCCCTGAGAGGA...ACCCCCACCCAGATAGGCCCAAGCCTGCTGCCTATCATGTGGCAGCTCTACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
3UTR-3UTR TCA 90 bp CTGGCCTCCTGCTGCGTCCCGGGATGTGGACCACTGACCCAGAGGCTTCTGAGTGAGGTCCTGCTCAGGTaGATCGGCTGTGTTCTCACA +
Preference number: 2 (lower is better)
Translates to: LASCCVPGCGPLTQRLLSEVLLR*IGCVLT
Trigger: TGTGAGAACACAGCCGATTCACCTGAGCAGGACCTC...ACTCAGAAGCCTCTGGGTCAGTGGTCCACATCCCGGGACGCAGCAGGAGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
3UTR-3UTR TCA 90 bp GGCAGCAGGCTTGGGCCTATCTGGGTGGGGGTCATAGGCCTCCCCAGGACGACGGGTCCGAGTGTGAAATaGTGGTCATCACTGTTCCCT +
Preference number: 2 (lower is better)
Translates to: GSRLGPIWVGVIGLPRTTGPSVK*WSSLFP
Trigger: AGGGAACAGTGATGACCATCATTTCACACTCGGACC...CGTCGTCCTGGGGAGGCCTATGACCCCCACCCAGATAGGCCCAAGCCTGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
3UTR-3UTR CCA 90 bp CTATCCCTTTTCCACGTGGGCAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCATCCCCATTGTAGGCTaGCCAGGCTCAGGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: LSLFHVGKPRVLRAHPQGIPIVG*PGSGPG
Trigger: CCCAGGGCCTGAGCCTGGCCAGCCTACAATGGGGAT...GCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCCACGTGGAAAAGGGATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000554012.5
3UTR-3UTR CCA 90 bp AGGAGTGGTAGTGCTAAGGCGAGCAGAGTGGGCTACAGGCAGGTCCTGCAGGCCTCCCAGACCCCAGCGTaGTGGAGAAGACACAGGCAT +
Preference number: 2 (lower is better)
Translates to: RSGSAKASRVGYRQVLQASQTPA*WRRHRH
Trigger: ATGCCTGTGTCTTCTCCACCACGCTGGGGTCTGGGA...GGCCTGCAGGACCTGCCTGTAGCCCACTCTGCTCGCCTTAGCACTACCACTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000557043.4
3UTR-3UTR CCA 90 bp CAGGTCCTGCAGGCCCTGGGTAGAGCTCATCCTCTGTCTGTCCATTCCTCCCAGAGGCTTGGGCCTATCTaGGTGGGGGTCATAGGCCTC +
Preference number: 2 (lower is better)
Translates to: QVLQALGRAHPLSVHSSQRLGPI*VGVIGL
Trigger: GAGGCCTATGACCCCCACCCAGATAGGCCCAAGCCT...CTGGGAGGAATGGACAGACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000555886.5
3UTR-3UTR CCA 90 bp ATGAGCAGCTGCGATAAAGGGGGCTGCCTACAAAGCCCTTGGCTCCCGAAGTGGCTAGGGACCCTCAGATaGCAGCAGTCGGGGAGGGGT +
Preference number: 2 (lower is better)
Translates to: MSSCDKGGCLQSPWLPKWLGTLR*QQSGRG
Trigger: ACCCCTCCCCGACTGCTGCCATCTGAGGGTCCCTAG...CCACTTCGGGAGCCAAGGGCTTTGTAGGCAGCCCCCTTTATCGCAGCTGCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555202.1
3UTR-3UTR CCA 90 bp CCAAATGGAATCCTCCTTGGCAGGAGTGGTAGTGCTAAGGCGAGCAGAGTGGGCATCCCCATTGTAGGCTaGCCAGGCTCAGGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: PNGILLGRSGSAKASRVGIPIVG*PGSGPG
Trigger: CCCAGGGCCTGAGCCTGGCCAGCCTACAATGGGGAT...GCCCACTCTGCTCGCCTTAGCACTACCACTCCTGCCAAGGAGGATTCCATTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
3UTR-3UTR CCA 90 bp AGGGTAGAGCTGCCACATGATAGGCAGCAGGCTTGGGCCTATCTGGGTGGGGGTTCCCAGACCCCAGCGTaGTGGAGAAGACACAGGCAT +
Preference number: 2 (lower is better)
Translates to: RVELPHDRQQAWAYLGGGSQTPA*WRRHRH
Trigger: ATGCCTGTGTCTTCTCCACCACGCTGGGGTCTGGGA...ACCCCCACCCAGATAGGCCCAAGCCTGCTGCCTATCATGTGGCAGCTCTACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000555886.5
3UTR-3UTR CCA 90 bp CCTGGGGTGAAAGGAGACAGGTGCTGCCAAGACCATACATCAGTCATCTGGCAGGCCAGGCTCAGGCCCTaGGGTGAAAGGAGACAGGTG +
Preference number: 2 (lower is better)
Translates to: PGVKGDRCCQDHTSVIWQARLRP*GERRQV
Trigger: CACCTGTCTCCTTTCACCCCAGGGCCTGAGCCTGGC...CTGCCAGATGACTGATGTATGGTCTTGGCAGCACCTGTCTCCTTTCACCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555886.5
ENST00000556156.1
3UTR-3UTR CCA 90 bp GCCATCCACCCATCTGGGCAGGGGTCCGAGTGTGAAATGATGGTCATCACTGTTATCCCCATTGTAGGCTaGCCAGGCTCAGGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: AIHPSGQGSECEMMVITVIPIVG*PGSGPG
Trigger: CCCAGGGCCTGAGCCTGGCCAGCCTACAATGGGGAT...AACAGTGATGACCATCATTTCACACTCGGACCCCTGCCCAGATGGGTGGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
3UTR-3UTR CCA 90 bp CCCAGGACGACGTCTTCCCGACGCAAGAGCACCCGTAACTGTAACCTATCCTTTATCCCCATTGTAGGCTaGCCAGGCTCAGGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: PRTTSSRRKSTRNCNLSFIPIVG*PGSGPG
Trigger: CCCAGGGCCTGAGCCTGGCCAGCCTACAATGGGGAT...AAAGGATAGGTTACAGTTACGGGTGCTCTTGCGTCGGGAAGACGTCGTCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
3UTR-3UTR CCA 90 bp CAGGTCCTGCAGGCCCTGGGTAGAGCTCATCCTCTGTCTGTCCATTCCTCCCAGCAGACCCCAGCGTGGTaGAGAAGACACAGGCATAGT +
Preference number: 2 (lower is better)
Translates to: QVLQALGRAHPLSVHSSQQTPAW*RRHRHS
Trigger: ACTATGCCTGTGTCTTCTCCACCACGCTGGGGTCTG...CTGGGAGGAATGGACAGACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000555886.5
ENST00000557043.4
3UTR-3UTR CCA 90 bp CTAAGGCGAGCAGAGTGGGCTACAGGCAGGTCCTGCAGGCCCTGGGTAGAGCTCAGAAGCTCTGCCAAATaGAATCCTCCTTGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: LRRAEWATGRSCRPWVELRSSAK*NPPWQE
Trigger: CTCCTGCCAAGGAGGATTCCATTTGGCAGAGCTTCT...GAGCTCTACCCAGGGCCTGCAGGACCTGCCTGTAGCCCACTCTGCTCGCCTTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
3UTR-3UTR CCA 90 bp GCCTATCTGGGTGGGGGTCATAGGCCTCCCCAGGACGACGTCTTCCCGACGCAAGTAATTCCAGTGCTTTaGAAGGCAGAGGCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: AYLGGGHRPPQDDVFPTQVIPVL*KAEAGG
Trigger: TCCTCCTGCCTCTGCCTTCCAAAGCACTGGAATTAC...TTGCGTCGGGAAGACGTCGTCCTGGGGAGGCCTATGACCCCCACCCAGATAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
3UTR-3UTR CCA 90 bp AAGACCATACATCAGTCATCTGGCAGCAGCTCGAGAAGCATGTCCTCCACGCCGTCCTCTCAGGGACTCTaGCTGGGCCAGGACCACCAG +
Preference number: 2 (lower is better)
Translates to: KTIHQSSGSSSRSMSSTPSSQGL*LGQDHQ
Trigger: CTGGTGGTCCTGGCCCAGCCAGAGTCCCTGAGAGGA...CGGCGTGGAGGACATGCTTCTCGAGCTGCTGCCAGATGACTGATGTATGGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555886.5
ENST00000556156.1
3UTR-3UTR GCA 90 bp AGGGACAGAAAGAGGCTGAAGACCATCATCCAGCTGAGAAAAGCCGAGGCACAGGCTACAGGCAGGTCCTaGAGGCCCTGGGTAGAGCTC +
Preference number: 2 (lower is better)
Translates to: RDRKRLKTIIQLRKAEAQATGRS*RPWVEL
Trigger: GAGCTCTACCCAGGGCCTGCAGGACCTGCCTGTAGC...CTGTGCCTCGGCTTTTCTCAGCTGGATGATGGTCTTCAGCCTCTTTCTGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
3UTR-3UTR GCA 90 bp CAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTGTGTTCTCACAAGTTCACGGCTACAGGCAGGTCCTaGAGGCCCTGGGTAGAGCTC +
Preference number: 2 (lower is better)
Translates to: QGFRGPAQVNRLCSHKFTATGRS*RPWVEL
Trigger: GAGCTCTACCCAGGGCCTGCAGGACCTGCCTGTAGC...CGTGAACTTGTGAGAACACAGCCGATTCACCTGAGCAGGACCTCTGAAACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
3UTR-3UTR CCA 90 bp CTATCCCTTTTCCACGTGGGCAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCCAGACCCCAGCGTGGTaGAGAAGACACAGGCATAGT +
Preference number: 2 (lower is better)
Translates to: LSLFHVGKPRVLRAHPQGQTPAW*RRHRHS
Trigger: ACTATGCCTGTGTCTTCTCCACCACGCTGGGGTCTG...GCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCCACGTGGAAAAGGGATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000554012.5
3UTR-3UTR CCA 90 bp GAAGGTGAACAGAAACACAACATCCCCATTGTAGGCTGGCCAGGCTCAGGCCCTGATAGGCAGCAGGCTTaGGCCTATCTGGGTGGGGGT +
Preference number: 2 (lower is better)
Translates to: EGEQKHNIPIVGWPGSGPDRQQA*AYLGGG
Trigger: ACCCCCACCCAGATAGGCCCAAGCCTGCTGCCTATC...AGGGCCTGAGCCTGGCCAGCCTACAATGGGGATGTTGTGTTTCTGTTCACCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
3UTR-3UTR GCA 90 bp CTTTCAGGTTCCGCTTGCCAGGGCTTCTCCAGGCGCAGAAAACCGGAATCCCTCCACTTCCTTAGGCCATaGATGCTCCTCTCAGGGACT +
Preference number: 2 (lower is better)
Translates to: LSGSACQGFSRRRKPESLHFLRP*MLLSGT
Trigger: AGTCCCTGAGAGGAGCATGCATGGCCTAAGGAAGTG...GAGGGATTCCGGTTTTCTGCGCCTGGAGAAGCCCTGGCAAGCGGAACCTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
3UTR-3UTR CCA 90 bp TGGAAGAAGCTCTGCCAAATGGAATCCTCCTTGGCAGGAGTGGTAGTGCTAAGGGCCAGGCTCAGGCCCTaGGGTGAAAGGAGACAGGTG +
Preference number: 2 (lower is better)
Translates to: WKKLCQMESSLAGVVVLRARLRP*GERRQV
Trigger: CACCTGTCTCCTTTCACCCCAGGGCCTGAGCCTGGC...CCTTAGCACTACCACTCCTGCCAAGGAGGATTCCATTTGGCAGAGCTTCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
3UTR-3UTR CCA 90 bp GACAGAAGGGACAGAAAGAGGCTGAAGACCATCATCCAGCTGAGAAAAGCCGAGATCCCCATTGTAGGCTaGCCAGGCTCAGGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: DRRDRKRLKTIIQLRKAEIPIVG*PGSGPG
Trigger: CCCAGGGCCTGAGCCTGGCCAGCCTACAATGGGGAT...CTCGGCTTTTCTCAGCTGGATGATGGTCTTCAGCCTCTTTCTGTCCCTTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
3UTR-3UTR CCA 90 bp CCAAATGGAATCCTCCTTGGCAGGAGTGGTAGTGCTAAGGCGAGCAGAGTGGGCCAGACCCCAGCGTGGTaGAGAAGACACAGGCATAGT +
Preference number: 2 (lower is better)
Translates to: PNGILLGRSGSAKASRVGQTPAW*RRHRHS
Trigger: ACTATGCCTGTGTCTTCTCCACCACGCTGGGGTCTG...GCCCACTCTGCTCGCCTTAGCACTACCACTCCTGCCAAGGAGGATTCCATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
3UTR-3UTR CCA 90 bp CCCAGGACGACGTCTTCCCGACGCAAGAGCACCCGTAACTGTAACCTATCCTTTAGGTCCTGCAGGCCCTaGGTAGAGCTCATCCTCTGT +
Preference number: 2 (lower is better)
Translates to: PRTTSSRRKSTRNCNLSFRSCRP*VELILC
Trigger: ACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCT...AAAGGATAGGTTACAGTTACGGGTGCTCTTGCGTCGGGAAGACGTCGTCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000555886.5
3UTR-3UTR CCA 90 bp CAGGTCCTGCAGGCCCTGGGTAGAGCTCATCCTCTGTCTGTCCATTCCTCCCAGGTAATTCCAGTGCTTTaGAAGGCAGAGGCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: QVLQALGRAHPLSVHSSQVIPVL*KAEAGG
Trigger: TCCTCCTGCCTCTGCCTTCCAAAGCACTGGAATTAC...CTGGGAGGAATGGACAGACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000555886.5
3UTR-3UTR CCA 90 bp GCTGCGATAAAGGGGGCTGCCTACAAAGCCCTTGGCTCCCGAAGTGGTAAGGGACTGATACAGCCACTGTaGACTAAGAGGGGTCAGGCT +
Preference number: 2 (lower is better)
Translates to: AAIKGAAYKALGSRSGKGLIQPL*TKRGQA
Trigger: AGCCTGACCCCTCTTAGTCCACAGTGGCTGTATCAG...TCCCTTACCACTTCGGGAGCCAAGGGCTTTGTAGGCAGCCCCCTTTATCGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555202.1
3UTR-3UTR TCA 90 bp GATAGGCAGCAGGCTTGGGCCTATCTGGGTGGGGGTCATAGGCCTCCCCAGGACCATAGTAAACGAAGGTaGACAGAAACACAACATCCC +
Preference number: 2 (lower is better)
Translates to: DRQQAWAYLGGGHRPPQDHSKRR*TETQHP
Trigger: GGGATGTTGTGTTTCTGTTCACCTTCGTTTACTATG...GTCCTGGGGAGGCCTATGACCCCCACCCAGATAGGCCCAAGCCTGCTGCCTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
3UTR-3UTR GCA 90 bp GAAGGTGAACAGAAACACAACATCCCCATTGTAGGCTGGCCAGGCTCAGGCCCTGGGTTTCAGAGGTCCTaGTCAGGTGAATCGGCTGTG +
Preference number: 2 (lower is better)
Translates to: EGEQKHNIPIVGWPGSGPGFQRS*SGESAV
Trigger: CACAGCCGATTCACCTGAGCAGGACCTCTGAAACCC...AGGGCCTGAGCCTGGCCAGCCTACAATGGGGATGTTGTGTTTCTGTTCACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
3UTR-3UTR GCA 90 bp GTATCGTCCATCAGGGTAGAGCTGCCACATGATAGGCAGCAGGCTTGGGCCTATTCCTTAGGCCATGCATaGTCCTCTCAGGGACTCTGG +
Preference number: 2 (lower is better)
Translates to: VSSIRVELPHDRQQAWAYSLGHA*SSQGLW
Trigger: CCAGAGTCCCTGAGAGGAGCATGCATGGCCTAAGGA...ATAGGCCCAAGCCTGCTGCCTATCATGTGGCAGCTCTACCCTGATGGACGATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
3UTR-3UTR CCA 90 bp AGGGACAGAAAGAGGCTGAAGACCATCATCCAGCTGAGAAAAGCCGAGGCACAGTCCCAGACCCCAGCGTaGTGGAGAAGACACAGGCAT +
Preference number: 2 (lower is better)
Translates to: RDRKRLKTIIQLRKAEAQSQTPA*WRRHRH
Trigger: ATGCCTGTGTCTTCTCCACCACGCTGGGGTCTGGGA...CTGTGCCTCGGCTTTTCTCAGCTGGATGATGGTCTTCAGCCTCTTTCTGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
3UTR-3UTR CCA 90 bp ACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTGTGTTCTCACAAAGGTCCTGCAGGCCCTaGGTAGAGCTCATCCTCTGT +
Preference number: 2 (lower is better)
Translates to: TGPGFQRSCSGESAVFSQRSCRP*VELILC
Trigger: ACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCT...TTGTGAGAACACAGCCGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
3UTR-3UTR CCA 90 bp CATGTGAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTGAGGCACAGGTATAGCTaGGCACCTGGAAGAAGCTCT +
Preference number: 2 (lower is better)
Translates to: HVRPLVQGFRGPAQVNRLRHRYS*APGRSS
Trigger: AGAGCTTCTTCCAGGTGCCCAGCTATACCTGTGCCT...CAGCCGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGTGGTCTCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
3UTR CAA 90 bp TTATCTGAGGAGAAGAAAAGGACAGGGCATACTTTCAGGTTCCGCTaGCCAGGGCTTCTCCAGGCGCAGAAAACCGGAATCCCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: LSEEKKRTGHTFRFR*PGLLQAQKTGIPPA
Trigger: GGCAGGAGGGATTCCGGTTTTCTGCGCCTGGAGAAGCCCTGGCAAGCGGAACCTGAAAGTATGCCCTGTCCTTTTCTTCTCCTCAGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
3UTR-3UTR TCA 90 bp AAGAAAAGGACAGGGCATACTTTCAGGTTCCGCTTGCCAGGGCTTCTCCAGGCGGCAGGGGTCCGAGTGTaGAATGATGGTCATCACTGT +
Preference number: 2 (lower is better)
Translates to: KKRTGHTFRFRLPGLLQAAGVRV*NDGHHC
Trigger: ACAGTGATGACCATCATTTCACACTCGGACCCCTGC...CGCCTGGAGAAGCCCTGGCAAGCGGAACCTGAAAGTATGCCCTGTCCTTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
3UTR-3UTR CCA 90 bp TGGAAGAAGCTCTGCCAAATGGAATCCTCCTTGGCAGGAGTGGTAGTGCTAAGGTCCCAGACCCCAGCGTaGTGGAGAAGACACAGGCAT +
Preference number: 2 (lower is better)
Translates to: WKKLCQMESSLAGVVVLRSQTPA*WRRHRH
Trigger: ATGCCTGTGTCTTCTCCACCACGCTGGGGTCTGGGA...CCTTAGCACTACCACTCCTGCCAAGGAGGATTCCATTTGGCAGAGCTTCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
3UTR-3UTR CCA 90 bp CCCCAGCGTGGTGGAGAAGACACAGGCATAGTAAACGAAGGTGAACAGAAACACAGGTCCTGCAGGCCCTaGGTAGAGCTCATCCTCTGT +
Preference number: 2 (lower is better)
Translates to: PQRGGEDTGIVNEGEQKHRSCRP*VELILC
Trigger: ACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCT...GTGTTTCTGTTCACCTTCGTTTACTATGCCTGTGTCTTCTCCACCACGCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000555886.5
ENST00000557043.4
3UTR-3UTR CCA 90 bp GCTGCGATAAAGGGGGCTGCCTACAAAGCCCTTGGCTCCCGAAGTGGTAAGGGATTAGCACTGCCTTCATaGAGAAGGGGTGGTCTTTCT +
Preference number: 2 (lower is better)
Translates to: AAIKGAAYKALGSRSGKGLALPS*RRGGLS
Trigger: AGAAAGACCACCCCTTCTCCATGAAGGCAGTGCTAA...TCCCTTACCACTTCGGGAGCCAAGGGCTTTGTAGGCAGCCCCCTTTATCGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555202.1
3UTR-3UTR TCA 90 bp CCTGAAGCTCACTTCCTTAGGCCATGCATGCTCCTCTCAGGGACTCTGGCTGGGCATAGTAAACGAAGGTaGACAGAAACACAACATCCC +
Preference number: 2 (lower is better)
Translates to: PEAHFLRPCMLLSGTLAGHSKRR*TETQHP
Trigger: GGGATGTTGTGTTTCTGTTCACCTTCGTTTACTATG...CCCAGCCAGAGTCCCTGAGAGGAGCATGCATGGCCTAAGGAAGTGAGCTTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
3UTR-3UTR GCA 90 bp CCCGACGCAAGAGCACCCGTAACTGTAACCTATCCTTTATCTGAGGAGAAGAAAAACCGGAATCCCTCCTaGCAGCCATCCACCCATCTG +
Preference number: 2 (lower is better)
Translates to: PDARAPVTVTYPLSEEKKNRNPS*QPSTHL
Trigger: CAGATGGGTGGATGGCTGGCAGGAGGGATTCCGGTT...TTTCTTCTCCTCAGATAAAGGATAGGTTACAGTTACGGGTGCTCTTGCGTCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
3UTR-3UTR CCA 90 bp GCCTATTCTCACTTCTCTCCACCAGAATCTAAGTCAAGGATAGAAGCTGATTCCGCCAGGCTCAGGCCCTaGGGTGAAAGGAGACAGGTG +
Preference number: 2 (lower is better)
Translates to: AYSHFSPPESKSRIEADSARLRP*GERRQV
Trigger: CACCTGTCTCCTTTCACCCCAGGGCCTGAGCCTGGC...GGAATCAGCTTCTATCCTTGACTTAGATTCTGGTGGAGAGAAGTGAGAATAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000554012.5
3UTR-3UTR CCA 90 bp GCAAGAGCACCCGTAACTGTAACCTATCCTTTATCTGAGGAGAAGAAAAGGACACTCAGGGACTCTGGCTaGGCCAGGACCACCAGCACA +
Preference number: 2 (lower is better)
Translates to: ARAPVTVTYPLSEEKKRTLRDSG*ARTTST
Trigger: TGTGCTGGTGGTCCTGGCCCAGCCAGAGTCCCTGAG...TGTCCTTTTCTTCTCCTCAGATAAAGGATAGGTTACAGTTACGGGTGCTCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
3UTR-3UTR CCA 90 bp TCGGCTGTGTTCTCACAAGTTCACGGAGCTGAGTGGGTGTGCAACATGAAATACAGAAGCTCTGCCAAATaGAATCCTCCTTGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: SAVFSQVHGAEWVCNMKYRSSAK*NPPWQE
Trigger: CTCCTGCCAAGGAGGATTCCATTTGGCAGAGCTTCT...GTATTTCATGTTGCACACCCACTCAGCTCCGTGAACTTGTGAGAACACAGCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
3UTR-3UTR CCA 90 bp CCCCAGCGTGGTGGAGAAGACACAGGCATAGTAAACGAAGGTGAACAGAAACACGCCAAGACCTTGATGTaGTACACTAAGCGCCAGAAA +
Preference number: 2 (lower is better)
Translates to: PQRGGEDTGIVNEGEQKHAKTLM*YTKRQK
Trigger: TTTCTGGCGCTTAGTGTACCACATCAAGGTCTTGGC...GTGTTTCTGTTCACCTTCGTTTACTATGCCTGTGTCTTCTCCACCACGCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554119.5
3UTR-3UTR TCA 90 bp ACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTGTGTTCTCACAACATAGTAAACGAAGGTaGACAGAAACACAACATCCC +
Preference number: 2 (lower is better)
Translates to: TGPGFQRSCSGESAVFSQHSKRR*TETQHP
Trigger: GGGATGTTGTGTTTCTGTTCACCTTCGTTTACTATG...TTGTGAGAACACAGCCGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
3UTR-3UTR TCA 90 bp CACTTCTCTCCACCAGAATCTAAGTCAAGGATAGAAGCTGATTCCGCACGAAGTACAAGTTCACGGAGCTaGGTGGGTGTGCAACATGAA +
Preference number: 2 (lower is better)
Translates to: HFSPPESKSRIEADSARSTSSRS*VGVQHE
Trigger: TTCATGTTGCACACCCACTCAGCTCCGTGAACTTGT...ACTTCGTGCGGAATCAGCTTCTATCCTTGACTTAGATTCTGGTGGAGAGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000554012.5
3UTR-3UTR TCA 90 bp AATCATTACAAAAAGTATTCATGCCACATACAACTTTGTAACACCCAGGTGCGTGCAAGCCAAGGGTTCTaGGGGCTCATCCACAGGGCT +
Preference number: 2 (lower is better)
Translates to: NHYKKYSCHIQLCNTQVRASQGF*GLIHRA
Trigger: AGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGC...ACGCACCTGGGTGTTACAAAGTTGTATGTGGCATGAATACTTTTTGTAATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
3UTR-3UTR CCA 90 bp GTGAAGTACTTTATAGATATGAGCAGCTGCGATAAAGGGGGCTGCCTACAAAGCTTCATGGAGAAGGGGTaGTCTTTCTTTCTGATACAG +
Preference number: 2 (lower is better)
Translates to: VKYFIDMSSCDKGGCLQSFMEKG*SFFLIQ
Trigger: CTGTATCAGAAAGAAAGACCACCCCTTCTCCATGAA...GCTTTGTAGGCAGCCCCCTTTATCGCAGCTGCTCATATCTATAAAGTACTTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555202.1
3UTR GCA 72 bp GAGGGCTCATCCACAGGGCTCGCCGGCCTGGCCTCCTaGTGCGTCCCGGGATGTGGACCACTGACCCAGAGG +
Preference number: 3 (lower is better)
Translates to: EGSSTGLAGLAS*CVPGCGPLTQR
Trigger: CCTCTGGGTCAGTGGTCCACATCCCGGGACGCAGCAGGAGGCCAGGCCGGCGAGCCCTGTGGATGAGCCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
3UTR TCA 72 bp CTCTATCCCTTTTCCACGTGGGCAAGCCAAGGGTTCTaGGGGCTCATCCACAGGGCTCGCCGGCCTGGCCTC +
Preference number: 3 (lower is better)
Translates to: LYPFSTWASQGF*GLIHRARRPGL
Trigger: GAGGCCAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCCACGTGGAAAAGGGATAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
3UTR CCA 72 bp CGAGCAGAGTGGGCTACAGGCAGGTCCTGCAGGCCCTaGGTAGAGCTCATCCTCTGTCTGTCCATTCCTCCC +
Preference number: 3 (lower is better)
Translates to: RAEWATGRSCRP*VELILCLSIPP
Trigger: GGGAGGAATGGACAGACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCTGCCTGTAGCCCACTCTGCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000557043.4
3UTR CCA 72 bp AGCTGCCACATGATAGGCAGCAGGCTTGGGCCTATCTaGGTGGGGGTCATAGGCCTCCCCAGGACGACGTCT +
Preference number: 3 (lower is better)
Translates to: SCHMIGSRLGPI*VGVIGLPRTTS
Trigger: AGACGTCGTCCTGGGGAGGCCTATGACCCCCACCCAGATAGGCCCAAGCCTGCTGCCTATCATGTGGCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
3UTR CCA 72 bp ATCAGGGTAGAGCTGCCACATGATAGGCAGCAGGCTTaGGCCTATCTGGGTGGGGGTCATAGGCCTCCCCAG +
Preference number: 3 (lower is better)
Translates to: IRVELPHDRQQA*AYLGGGHRPPQ
Trigger: CTGGGGAGGCCTATGACCCCCACCCAGATAGGCCCAAGCCTGCTGCCTATCATGTGGCAGCTCTACCCTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
3UTR CCA 72 bp CAACATCCCCATTGTAGGCTGGCCAGGCTCAGGCCCTaGGGTGAAAGGAGACAGGTGCTGCCAAGACCATAC +
Preference number: 3 (lower is better)
Translates to: QHPHCRLARLRP*GERRQVLPRPY
Trigger: GTATGGTCTTGGCAGCACCTGTCTCCTTTCACCCCAGGGCCTGAGCCTGGCCAGCCTACAATGGGGATGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000555886.5
ENST00000556156.1
ENST00000557043.4
3UTR CCA 72 bp GGAGACAGGTGCTGCCAAGACCATACATCAGTCATCTaGCAGCAGCTCGAGAAGCATGTCCTCCACGCCGTC +
Preference number: 3 (lower is better)
Translates to: GDRCCQDHTSVI*QQLEKHVLHAV
Trigger: GACGGCGTGGAGGACATGCTTCTCGAGCTGCTGCCAGATGACTGATGTATGGTCTTGGCAGCACCTGTCTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555886.5
ENST00000556156.1
3UTR TCA 72 bp CTGAGCACAGATAAGGGCTCCTTTCAGGCCTTTCCTTaGGCTGCACGTGAACCTGTGTGGGCAGGCAGCGTT +
Preference number: 3 (lower is better)
Translates to: LSTDKGSFQAFP*AAREPVWAGSV
Trigger: AACGCTGCCTGCCCACACAGGTTCACGTGCAGCTCAAGGAAAGGCCTGAAAGGAGCCCTTATCTGTGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
3UTR TCA 72 bp GCCAGCCATCCACCCATCTGGGCAGGGGTCCGAGTGTaGAATGATGGTCATCACTGTTCCCTGAAGCTCACT +
Preference number: 3 (lower is better)
Translates to: ASHPPIWAGVRV*NDGHHCSLKLT
Trigger: AGTGAGCTTCAGGGAACAGTGATGACCATCATTTCACACTCGGACCCCTGCCCAGATGGGTGGATGGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
3UTR TCA 72 bp GGGATGTGGACCACTGACCCAGAGGCTTCTGAGTCCTaGGCACAGATAAGGGCTCCTTTCAGGCCTTTCCTT +
Preference number: 3 (lower is better)
Translates to: GMWTTDPEASES*AQIRAPFRPFL
Trigger: AAGGAAAGGCCTGAAAGGAGCCCTTATCTGTGCTCAGGACTCAGAAGCCTCTGGGTCAGTGGTCCACATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
3UTR TCA 72 bp CCATCCACCCATCTGGGCAGGGGTCCGAGTGTGAAATaGTGGTCATCACTGTTCCCTGAAGCTCACTTCCTT +
Preference number: 3 (lower is better)
Translates to: PSTHLGRGPSVK*WSSLFPEAHFL
Trigger: AAGGAAGTGAGCTTCAGGGAACAGTGATGACCATCATTTCACACTCGGACCCCTGCCCAGATGGGTGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
3UTR GCA 72 bp CCATGTGAGACCACTGGTCCAGGGTTTCAGAGGTCCTaGTCAGGTGAATCGGCTGTGTTCTCACAAGTTCAC +
Preference number: 3 (lower is better)
Translates to: PCETTGPGFQRS*SGESAVFSQVH
Trigger: GTGAACTTGTGAGAACACAGCCGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGTGGTCTCACATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
3UTR GCA 72 bp AGAAGAAAAGGACAGGGCATACTTTCAGGTTCCGCTTaGCAGGGCTTCTCCAGGCGCAGAAAACCGGAATCC +
Preference number: 3 (lower is better)
Translates to: RRKGQGILSGSA*QGFSRRRKPES
Trigger: GGATTCCGGTTTTCTGCGCCTGGAGAAGCCCTGGCAAGCGGAACCTGAAAGTATGCCCTGTCCTTTTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
3UTR-3UTR CAA 90 bp TTCAGAGGTCCTGCTCAGGTGAATCGGCTGTGTTCTCACAAGTTCACGGAGCTGCAAATGGAATCCTCCTaGGCAGGAGTGGTAGTGCTA +
Preference number: 3 (lower is better)
Translates to: FRGPAQVNRLCSHKFTELQMESS*AGVVVL
Trigger: TAGCACTACCACTCCTGCCAAGGAGGATTCCATTTG...CAGCTCCGTGAACTTGTGAGAACACAGCCGATTCACCTGAGCAGGACCTCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR CCA 90 bp GGGCAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGGCCTCCCCGCTCGCTGGTCCCTaGGATGTGGGGCCGACCCTT +
Preference number: 4 (lower is better)
Translates to: GQAKGSEGSSTGLAGLASPLAGP*DVGPTL
Trigger: AAGGGTCGGCCCCACATCCCAGGGACCAGCGAGCGG...GGAGGCCAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554012.5
CDS-3UTR TCA 90 bp CTAAGGCGAGCAGAGTGGGCTACAGGCAGGTCCTGCAGGCCCTGGGTAGAGCTCGGTCCGGGTGGTCGGTaGCTGCCTCCCCGAGTGTCG +
Preference number: 4 (lower is better)
Translates to: LRRAEWATGRSCRPWVELGPGGR*LPPRVS
Trigger: CGACACTCGGGGAGGCAGTCACCGACCACCCGGACC...GAGCTCTACCCAGGGCCTGCAGGACCTGCCTGTAGCCCACTCTGCTCGCCTTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
CDS-3UTR TCA 90 bp GGTAGTGCTAAGGCGAGCAGAGTGGGCTACAGGCAGGTCCTGCAGGCCCTGGGTGGTCCGGGTGGTCGGTaGCTGCCTCCCCGAGTGTCG +
Preference number: 4 (lower is better)
Translates to: GSAKASRVGYRQVLQALGGPGGR*LPPRVS
Trigger: CGACACTCGGGGAGGCAGTCACCGACCACCCGGACC...ACCCAGGGCCTGCAGGACCTGCCTGTAGCCCACTCTGCTCGCCTTAGCACTACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
CDS-3UTR TCA 90 bp GGACTCTGGCTGGGCCAGGACCACCAGCACACACACGTGTCTAGCCACCCAGACGGTCCGGGTGGTCGGTaGCTGCCTCCCCGAGTGTCG +
Preference number: 4 (lower is better)
Translates to: GLWLGQDHQHTHVSSHPDGPGGR*LPPRVS
Trigger: CGACACTCGGGGAGGCAGTCACCGACCACCCGGACC...GTCTGGGTGGCTAGACACGTGTGTGTGCTGGTGGTCCTGGCCCAGCCAGAGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
CDS-3UTR TCA 90 bp GGGCAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGGCCTCCGCAAGCCAAGGGTTCTaGGGGCTCATCCACAGGGCT +
Preference number: 4 (lower is better)
Translates to: GQAKGSEGSSTGLAGLASASQGF*GLIHRA
Trigger: AGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGC...GGAGGCCAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR GCA 90 bp CTGGCCTCCTGCTGCGTCCCGGGATGTGGACCACTGACCCAGAGGCTTCTGAGTCGGGTGGTCGGTGACTaGCTCCCCGAGTGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: LASCCVPGCGPLTQRLLSRVVGD*LPECRA
Trigger: TGCCCGACACTCGGGGAGGCAGTCACCGACCACCCG...ACTCAGAAGCCTCTGGGTCAGTGGTCCACATCCCGGGACGCAGCAGGAGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
CDS-3UTR CCA 90 bp CCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGGCCTCCTGCTGCGGATAGGCAGCAGGCTTaGGCCTATCTGGGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: PRVLRAHPQGSPAWPPAADRQQA*AYLGGG
Trigger: ACCCCCACCCAGATAGGCCCAAGCCTGCTGCCTATC...CGCAGCAGGAGGCCAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR CCA 90 bp GTGGGCAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGGCCTATCCCCATTGTAGGCTaGCCAGGCTCAGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: VGKPRVLRAHPQGSPAWPIPIVG*PGSGPG
Trigger: CCCAGGGCCTGAGCCTGGCCAGCCTACAATGGGGAT...AGGCCAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR CCA 90 bp GGGCAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGGCCTCCGCACGTGAACCTGTGTaGGCAGGCAGCGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: GQAKGSEGSSTGLAGLASAREPV*AGSVCR
Trigger: CCTGCAAACGCTGCCTGCCCACACAGGTTCACGTGC...GGAGGCCAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR CCA 90 bp CCACGTGGGCAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGCTGCGTCCCGGGATGTaGACCACTGACCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: PRGQAKGSEGSSTGLAGLLRPGM*TTDPEA
Trigger: AGCCTCTGGGTCAGTGGTCCACATCCCGGGACGCAG...CAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCCACGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR CCA 90 bp GGGCCTATCTGGGTGGGGGTCATAGGCCTCCCCAGGACGACGTCTTCCCGACGCCTCAGGGACTCTGGCTaGGCCAGGACCACCAGCACA +
Preference number: 4 (lower is better)
Translates to: GPIWVGVIGLPRTTSSRRLRDSG*ARTTST
Trigger: TGTGCTGGTGGTCCTGGCCCAGCCAGAGTCCCTGAG...GCGTCGGGAAGACGTCGTCCTGGGGAGGCCTATGACCCCCACCCAGATAGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
CDS-3UTR TCA 90 bp TTGGCAGGAGTGGTAGTGCTAAGGCGAGCAGAGTGGGCTACAGGCAGGTCCTGCGGTCCGGGTGGTCGGTaGCTGCCTCCCCGAGTGTCG +
Preference number: 4 (lower is better)
Translates to: LAGVVVLRRAEWATGRSCGPGGR*LPPRVS
Trigger: CGACACTCGGGGAGGCAGTCACCGACCACCCGGACC...GCAGGACCTGCCTGTAGCCCACTCTGCTCGCCTTAGCACTACCACTCCTGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000554012.5
CDS-3UTR GCA 90 bp GGTTCCGCTTGCCAGGGCTTCTCCAGGCGCAGAAAACCGGAATCCCTCCTGCCACGGGTGGTCGGTGACTaGCTCCCCGAGTGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: GSACQGFSRRRKPESLLPRVVGD*LPECRA
Trigger: TGCCCGACACTCGGGGAGGCAGTCACCGACCACCCG...TGGCAGGAGGGATTCCGGTTTTCTGCGCCTGGAGAAGCCCTGGCAAGCGGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
CDS-3UTR GCA 90 bp CCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGGCCTCCTGCTGCGGGCAGCCAGGCGTGCTaGTTCTCGTCCAAATACACG +
Preference number: 4 (lower is better)
Translates to: PRVLRAHPQGSPAWPPAAGSQAC*FSSKYT
Trigger: CGTGTATTTGGACGAGAAGCAGCACGCCTGGCTGCC...CGCAGCAGGAGGCCAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
CDS-3UTR GCA 90 bp AGGCCTTTCCTTGAGCTGCACGTGAACCTGTGTGGGCAGGCAGCGTTTGCAGGCGCCGGCCTGGCCTCCTaGTGCGTCCCGGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: RPFLELHVNLCGQAAFAGAGLAS*CVPGCG
Trigger: TCCACATCCCGGGACGCAGCAGGAGGCCAGGCCGGC...GCCTGCAAACGCTGCCTGCCCACACAGGTTCACGTGCAGCTCAAGGAAAGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR TCA 90 bp GCTGCGATAAAGGGGGCTGCCTACAAAGCCCTTGGCTCCCGAAGTGGTAAGGGAGGTCCGGGTGGTCGGTaGCTGCCTCCCCGAGTGTCG +
Preference number: 4 (lower is better)
Translates to: AAIKGAAYKALGSRSGKGGPGGR*LPPRVS
Trigger: CGACACTCGGGGAGGCAGTCACCGACCACCCGGACC...TCCCTTACCACTTCGGGAGCCAAGGGCTTTGTAGGCAGCCCCCTTTATCGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555202.1
CDS-3UTR GCA 90 bp CTGGCCTCCTGCTGCGTCCCGGGATGTGGACCACTGACCCAGAGGCTTCTGAGTGCTACAGGCAGGTCCTaGAGGCCCTGGGTAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LASCCVPGCGPLTQRLLSATGRS*RPWVEL
Trigger: GAGCTCTACCCAGGGCCTGCAGGACCTGCCTGTAGC...ACTCAGAAGCCTCTGGGTCAGTGGTCCACATCCCGGGACGCAGCAGGAGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR GCA 90 bp TACAGGCAGGTCCTGCAGGCCCTGGGTAGAGCTCATCCTCTGTCTGTCCATTCCGCCGGCCTGGCCTCCTaGTGCGTCCCGGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: YRQVLQALGRAHPLSVHSAGLAS*CVPGCG
Trigger: TCCACATCCCGGGACGCAGCAGGAGGCCAGGCCGGC...GGAATGGACAGACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCTGCCTGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR CCA 90 bp CATGCAGGCGTAGCACCATGTGAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCCACAGGCGGTCCGGGTaGTCGGTGACTGCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: HAGVAPCETTGPGFQRSCHRRSG*SVTASP
Trigger: CGGGGAGGCAGTCACCGACCACCCGGACCGCCTGTG...GCAGGACCTCTGAAACCCTGGACCAGTGGTCTCACATGGTGCTACGCCTGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
CDS-3UTR CCA 90 bp AGGTCCTGCAGGCCCTGGGTAGAGCTCATCCTCTGTCTGTCCATTCCTCCCAGACACAGGCGGTCCGGGTaGTCGGTGACTGCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: RSCRPWVELILCLSIPPRHRRSG*SVTASP
Trigger: CGGGGAGGCAGTCACCGACCACCCGGACCGCCTGTG...TCTGGGAGGAATGGACAGACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000555886.5
CDS-3UTR CCA 90 bp GGTAGTGCTAAGGCGAGCAGAGTGGGCTACAGGCAGGTCCTGCAGGCCCTGGGTGCCAGGCTCAGGCCCTaGGGTGAAAGGAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: GSAKASRVGYRQVLQALGARLRP*GERRQV
Trigger: CACCTGTCTCCTTTCACCCCAGGGCCTGAGCCTGGC...ACCCAGGGCCTGCAGGACCTGCCTGTAGCCCACTCTGCTCGCCTTAGCACTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000557043.4
CDS-3UTR CCA 90 bp CCACGTGGGCAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGAGGTCCTGCAGGCCCTaGGTAGAGCTCATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PRGQAKGSEGSSTGLAGLRSCRP*VELILC
Trigger: ACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCT...CAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCCACGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR CCA 90 bp AGGCTTGGGCCTATCTGGGTGGGGGTCATAGGCCTCCCCAGGACGACGTCTTCCCTCAGGGACTCTGGCTaGGCCAGGACCACCAGCACA +
Preference number: 4 (lower is better)
Translates to: RLGPIWVGVIGLPRTTSSLRDSG*ARTTST
Trigger: TGTGCTGGTGGTCCTGGCCCAGCCAGAGTCCCTGAG...GGAAGACGTCGTCCTGGGGAGGCCTATGACCCCCACCCAGATAGGCCCAAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
CDS-3UTR CCA 90 bp GTGGGCAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGGCCTCTGGTCCCTGGGATGTaGGGCCGACCCTTTATATCC +
Preference number: 4 (lower is better)
Translates to: VGKPRVLRAHPQGSPAWPLVPGM*GRPFIS
Trigger: GGATATAAAGGGTCGGCCCCACATCCCAGGGACCAG...AGGCCAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554012.5
CDS-3UTR TCA 90 bp GTGGGCAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGGCCTAGACCATCATCCAGCTaGGAAAAGCCGAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: VGKPRVLRAHPQGSPAWPRPSSS*EKPRHR
Trigger: CCTGTGCCTCGGCTTTTCTCAGCTGGATGATGGTCT...AGGCCAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR TCA 90 bp CCACGTGGGCAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGGAGGTCCTGCTCAGGTaGATCGGCTGTGTTCTCACA +
Preference number: 4 (lower is better)
Translates to: PRGQAKGSEGSSTGLAGLEVLLR*IGCVLT
Trigger: TGTGAGAACACAGCCGATTCACCTGAGCAGGACCTC...CAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCCACGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR TCA 90 bp CTGGCCTCCTGCTGCGTCCCGGGATGTGGACCACTGACCCAGAGGCTTCTGAGTTCCTTGAGCTGCACGTaGACCTGTGTGGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LASCCVPGCGPLTQRLLSSLSCT*TCVGRQ
Trigger: CTGCCTGCCCACACAGGTTCACGTGCAGCTCAAGGA...ACTCAGAAGCCTCTGGGTCAGTGGTCCACATCCCGGGACGCAGCAGGAGGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR TCA 90 bp GTGGGCAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGGCCTGAGGCTTCTGAGTCCTaGGCACAGATAAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: VGKPRVLRAHPQGSPAWPEASES*AQIRAP
Trigger: AGGAGCCCTTATCTGTGCTCAGGACTCAGAAGCCTC...AGGCCAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR GCA 90 bp GCTGCGATAAAGGGGGCTGCCTACAAAGCCCTTGGCTCCCGAAGTGGTAAGGGACGGGTGGTCGGTGACTaGCTCCCCGAGTGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: AAIKGAAYKALGSRSGKGRVVGD*LPECRA
Trigger: TGCCCGACACTCGGGGAGGCAGTCACCGACCACCCG...TCCCTTACCACTTCGGGAGCCAAGGGCTTTGTAGGCAGCCCCCTTTATCGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555202.1
CDS-3UTR GCA 90 bp ATAGGCCTCCCCAGGACGACGTCTTCCCGACGCAAGAGCACCCGTAACTGTAACCGGGTGGTCGGTGACTaGCTCCCCGAGTGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: IGLPRTTSSRRKSTRNCNRVVGD*LPECRA
Trigger: TGCCCGACACTCGGGGAGGCAGTCACCGACCACCCG...GTTACAGTTACGGGTGCTCTTGCGTCGGGAAGACGTCGTCCTGGGGAGGCCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
CDS-3UTR CCA 90 bp GAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTGTGTTCCACAGGCGGTCCGGGTaGTCGGTGACTGCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: ETTGPGFQRSCSGESAVFHRRSG*SVTASP
Trigger: CGGGGAGGCAGTCACCGACCACCCGGACCGCCTGTG...GAACACAGCCGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGTGGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
CDS-3UTR CCA 90 bp GCCTATCTGGGTGGGGGTCATAGGCCTCCCCAGGACGACGTCTTCCCGACGCAAGATAGGCAGCAGGCTTaGGCCTATCTGGGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: AYLGGGHRPPQDDVFPTQDRQQA*AYLGGG
Trigger: ACCCCCACCCAGATAGGCCCAAGCCTGCTGCCTATC...TTGCGTCGGGAAGACGTCGTCCTGGGGAGGCCTATGACCCCCACCCAGATAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
CDS-3UTR CCA 90 bp TATCTGGGTGGGGGTCATAGGCCTCCCCAGGACGACGTCTTCCCGACGCAAGAGGCCAGGCTCAGGCCCTaGGGTGAAAGGAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: YLGGGHRPPQDDVFPTQEARLRP*GERRQV
Trigger: CACCTGTCTCCTTTCACCCCAGGGCCTGAGCCTGGC...CTCTTGCGTCGGGAAGACGTCGTCCTGGGGAGGCCTATGACCCCCACCCAGATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
CDS-3UTR CCA 90 bp GGGCAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGGCCTCCAGGCACAGGTATAGCTaGGCACCTGGAAGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: GQAKGSEGSSTGLAGLASRHRYS*APGRSS
Trigger: AGAGCTTCTTCCAGGTGCCCAGCTATACCTGTGCCT...GGAGGCCAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR CCA 90 bp CCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGGCCTCCTGCTGCGAGGCACAGGTATAGCTaGGCACCTGGAAGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: PRVLRAHPQGSPAWPPAARHRYS*APGRSS
Trigger: AGAGCTTCTTCCAGGTGCCCAGCTATACCTGTGCCT...CGCAGCAGGAGGCCAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR CCA 90 bp CTGGCCTCCTGCTGCGTCCCGGGATGTGGACCACTGACCCAGAGGCTTCTGAGTGCACGTGAACCTGTGTaGGCAGGCAGCGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LASCCVPGCGPLTQRLLSAREPV*AGSVCR
Trigger: CCTGCAAACGCTGCCTGCCCACACAGGTTCACGTGC...ACTCAGAAGCCTCTGGGTCAGTGGTCCACATCCCGGGACGCAGCAGGAGGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR CCA 90 bp TATCTGGGTGGGGGTCATAGGCCTCCCCAGGACGACGTCTTCCCGACGCAAGAGCTCAGGGACTCTGGCTaGGCCAGGACCACCAGCACA +
Preference number: 4 (lower is better)
Translates to: YLGGGHRPPQDDVFPTQELRDSG*ARTTST
Trigger: TGTGCTGGTGGTCCTGGCCCAGCCAGAGTCCCTGAG...CTCTTGCGTCGGGAAGACGTCGTCCTGGGGAGGCCTATGACCCCCACCCAGATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
CDS-3UTR CCA 90 bp TATCTGGGTGGGGGTCATAGGCCTCCCCAGGACGACGTCTTCCCGACGCAAGAGTCCTCTCAGGGACTCTaGCTGGGCCAGGACCACCAG +
Preference number: 4 (lower is better)
Translates to: YLGGGHRPPQDDVFPTQESSQGL*LGQDHQ
Trigger: CTGGTGGTCCTGGCCCAGCCAGAGTCCCTGAGAGGA...CTCTTGCGTCGGGAAGACGTCGTCCTGGGGAGGCCTATGACCCCCACCCAGATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
CDS-3UTR TCA 90 bp CAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGGCCTCCTGCCCAGAAACTGGAGTCTaGGGATCGGTATCGTCCATC +
Preference number: 4 (lower is better)
Translates to: QAKGSEGSSTGLAGLASCPETGV*GSVSSI
Trigger: GATGGACGATACCGATCCTCAGACTCCAGTTTCTGG...GCAGGAGGCCAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR GCA 90 bp GTGCTAAGGCGAGCAGAGTGGGCTACAGGCAGGTCCTGCAGGCCCTGGGTAGAGGGCAGCCAGGCGTGCTaGTTCTCGTCCAAATACACG +
Preference number: 4 (lower is better)
Translates to: VLRRAEWATGRSCRPWVEGSQAC*FSSKYT
Trigger: CGTGTATTTGGACGAGAAGCAGCACGCCTGGCTGCC...CTCTACCCAGGGCCTGCAGGACCTGCCTGTAGCCCACTCTGCTCGCCTTAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
CDS-3UTR GCA 90 bp GGACTCTGGCTGGGCCAGGACCACCAGCACACACACGTGTCTAGCCACCCAGACGGCAGCCAGGCGTGCTaGTTCTCGTCCAAATACACG +
Preference number: 4 (lower is better)
Translates to: GLWLGQDHQHTHVSSHPDGSQAC*FSSKYT
Trigger: CGTGTATTTGGACGAGAAGCAGCACGCCTGGCTGCC...GTCTGGGTGGCTAGACACGTGTGTGTGCTGGTGGTCCTGGCCCAGCCAGAGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
CDS-3UTR GCA 90 bp CAGGTCCTGCAGGCCCTGGGTAGAGCTCATCCTCTGTCTGTCCATTCCTCCCAGGCTACAGGCAGGTCCTaGAGGCCCTGGGTAGAGCTC +
Preference number: 4 (lower is better)
Translates to: QVLQALGRAHPLSVHSSQATGRS*RPWVEL
Trigger: GAGCTCTACCCAGGGCCTGCAGGACCTGCCTGTAGC...CTGGGAGGAATGGACAGACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000557043.4
CDS-3UTR GCA 90 bp CCTGCTCAGGTGAATCGGCTGTGTTCTCACAAGTTCACGGAGCTGAGTGGGTGTGCCGGCCTGGCCTCCTaGTGCGTCCCGGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: PAQVNRLCSHKFTELSGCAGLAS*CVPGCG
Trigger: TCCACATCCCGGGACGCAGCAGGAGGCCAGGCCGGC...ACACCCACTCAGCTCCGTGAACTTGTGAGAACACAGCCGATTCACCTGAGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR CCA 90 bp CAGGACCACCAGCACACACACGTGTCTAGCCACCCAGACAGGGCCATGAAAGGCATCCCCATTGTAGGCTaGCCAGGCTCAGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: QDHQHTHVSSHPDRAMKGIPIVG*PGSGPG
Trigger: CCCAGGGCCTGAGCCTGGCCAGCCTACAATGGGGAT...GCCTTTCATGGCCCTGTCTGGGTGGCTAGACACGTGTGTGTGCTGGTGGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
CDS-3UTR CCA 90 bp AAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGGCCTCCTGCTCAGACCCCAGCGTGGTaGAGAAGACACAGGCATAGT +
Preference number: 4 (lower is better)
Translates to: KPRVLRAHPQGSPAWPPAQTPAW*RRHRHS
Trigger: ACTATGCCTGTGTCTTCTCCACCACGCTGGGGTCTG...AGCAGGAGGCCAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR CCA 90 bp CTAAGGCGAGCAGAGTGGGCTACAGGCAGGTCCTGCAGGCCCTGGGTAGAGCTCAGGTCCTGCAGGCCCTaGGTAGAGCTCATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: LRRAEWATGRSCRPWVELRSCRP*VELILC
Trigger: ACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCT...GAGCTCTACCCAGGGCCTGCAGGACCTGCCTGTAGCCCACTCTGCTCGCCTTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000557043.4
CDS-3UTR CCA 90 bp GTGCTAAGGCGAGCAGAGTGGGCTACAGGCAGGTCCTGCAGGCCCTGGGTAGAGAGGTCCTGCAGGCCCTaGGTAGAGCTCATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: VLRRAEWATGRSCRPWVERSCRP*VELILC
Trigger: ACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCT...CTCTACCCAGGGCCTGCAGGACCTGCCTGTAGCCCACTCTGCTCGCCTTAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000557043.4
CDS-3UTR TCA 90 bp AAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGGCCTCCTGCTCCAGAAACTGGAGTCTaGGGATCGGTATCGTCCATC +
Preference number: 4 (lower is better)
Translates to: KPRVLRAHPQGSPAWPPAPETGV*GSVSSI
Trigger: GATGGACGATACCGATCCTCAGACTCCAGTTTCTGG...AGCAGGAGGCCAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR TCA 90 bp AGGCTTGGGCCTATCTGGGTGGGGGTCATAGGCCTCCCCAGGACGACGTCTTCCGTGCTGCCAAGACCTTaGTGTGGTACACTAAGCGCC +
Preference number: 4 (lower is better)
Translates to: RLGPIWVGVIGLPRTTSSVLPRP*CGTLSA
Trigger: GGCGCTTAGTGTACCACATCAAGGTCTTGGCAGCAC...GGAAGACGTCGTCCTGGGGAGGCCTATGACCCCCACCCAGATAGGCCCAAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554119.5
CDS-3UTR GCA 90 bp AGGAGTGGTAGTGCTAAGGCGAGCAGAGTGGGCTACAGGCAGGTCCTGCAGGCCGGCAGCCAGGCGTGCTaGTTCTCGTCCAAATACACG +
Preference number: 4 (lower is better)
Translates to: RSGSAKASRVGYRQVLQAGSQAC*FSSKYT
Trigger: CGTGTATTTGGACGAGAAGCAGCACGCCTGGCTGCC...GGCCTGCAGGACCTGCCTGTAGCCCACTCTGCTCGCCTTAGCACTACCACTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
CDS-3UTR GCA 90 bp GGACTCTGGCTGGGCCAGGACCACCAGCACACACACGTGTCTAGCCACCCAGACAAGGGCAGCCAGGCGTaGTGCTTCTCGTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: GLWLGQDHQHTHVSSHPDKGSQA*CFSSKY
Trigger: GTATTTGGACGAGAAGCAGCACGCCTGGCTGCCCTT...GTCTGGGTGGCTAGACACGTGTGTGTGCTGGTGGTCCTGGCCCAGCCAGAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
CDS-3UTR GCA 90 bp ATCCCTTTTCCACGTGGGCAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCTACAGGCAGGTCCTaGAGGCCCTGGGTAGAGCTC +
Preference number: 4 (lower is better)
Translates to: IPFPRGQAKGSEGSSTGLATGRS*RPWVEL
Trigger: GAGCTCTACCCAGGGCCTGCAGGACCTGCCTGTAGC...GAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCCACGTGGAAAAGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000554012.5
CDS-3UTR GCA 90 bp CTGGCCTCCTGCTGCGTCCCGGGATGTGGACCACTGACCCAGAGGCTTCTGAGTGGGTTTCAGAGGTCCTaGTCAGGTGAATCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LASCCVPGCGPLTQRLLSGFQRS*SGESAV
Trigger: CACAGCCGATTCACCTGAGCAGGACCTCTGAAACCC...ACTCAGAAGCCTCTGGGTCAGTGGTCCACATCCCGGGACGCAGCAGGAGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR GCA 90 bp AGGAGTGGTAGTGCTAAGGCGAGCAGAGTGGGCTACAGGCAGGTCCTGCAGGCCAACCGGAATCCCTCCTaGCAGCCATCCACCCATCTG +
Preference number: 4 (lower is better)
Translates to: RSGSAKASRVGYRQVLQANRNPS*QPSTHL
Trigger: CAGATGGGTGGATGGCTGGCAGGAGGGATTCCGGTT...GGCCTGCAGGACCTGCCTGTAGCCCACTCTGCTCGCCTTAGCACTACCACTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554119.5
CDS-3UTR GCA 90 bp GAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTGTGTTCTATATCCGGGCAGCATaGGGCCGCCACCAAGCGGCG +
Preference number: 4 (lower is better)
Translates to: ETTGPGFQRSCSGESAVFYIRAA*GRHQAA
Trigger: CGCCGCTTGGTGGCGGCCGCATGCTGCCCGGATATA...GAACACAGCCGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGTGGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554012.5
CDS-3UTR CCA 90 bp ATACATCAGTCATCTGGCAGCAGCTCGAGAAGCATGTCCTCCACGCCGTCAATCCACAGGCGGTCCGGGTaGTCGGTGACTGCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: IHQSSGSSSRSMSSTPSIHRRSG*SVTASP
Trigger: CGGGGAGGCAGTCACCGACCACCCGGACCGCCTGTG...GATTGACGGCGTGGAGGACATGCTTCTCGAGCTGCTGCCAGATGACTGATGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555886.5
ENST00000556156.1
CDS-3UTR CCA 90 bp AGGGTAGAGCTGCCACATGATAGGCAGCAGGCTTGGGCCTATCTGGGTGGGGGTAGGCTTGGGCCTATCTaGGTGGGGGTCATAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RVELPHDRQQAWAYLGGGRLGPI*VGVIGL
Trigger: GAGGCCTATGACCCCCACCCAGATAGGCCCAAGCCT...ACCCCCACCCAGATAGGCCCAAGCCTGCTGCCTATCATGTGGCAGCTCTACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
CDS-3UTR CCA 90 bp AGGCAGGTCCTGCAGGCCCTGGGTAGAGCTCATCCTCTGTCTGTCCATTCCTCCGATAGGCAGCAGGCTTaGGCCTATCTGGGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: RQVLQALGRAHPLSVHSSDRQQA*AYLGGG
Trigger: ACCCCCACCCAGATAGGCCCAAGCCTGCTGCCTATC...GGAGGAATGGACAGACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000557043.4
CDS-3UTR CCA 90 bp CAGGACCACCAGCACACACACGTGTCTAGCCACCCAGACAGGGCCATGAAAGGCGATAGGCAGCAGGCTTaGGCCTATCTGGGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: QDHQHTHVSSHPDRAMKGDRQQA*AYLGGG
Trigger: ACCCCCACCCAGATAGGCCCAAGCCTGCTGCCTATC...GCCTTTCATGGCCCTGTCTGGGTGGCTAGACACGTGTGTGTGCTGGTGGTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
CDS-3UTR CCA 90 bp CCACGTGGGCAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGCTAAGCGCCAGAAACTaGAGTCTGAGGATCGGTATC +
Preference number: 4 (lower is better)
Translates to: PRGQAKGSEGSSTGLAGLLSARN*SLRIGI
Trigger: GATACCGATCCTCAGACTCCAGTTTCTGGCGCTTAG...CAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCCACGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR CCA 90 bp AGGTCCTGCAGGCCCTGGGTAGAGCTCATCCTCTGTCTGTCCATTCCTCCCAGAGCCAGGCTCAGGCCCTaGGGTGAAAGGAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: RSCRPWVELILCLSIPPRARLRP*GERRQV
Trigger: CACCTGTCTCCTTTCACCCCAGGGCCTGAGCCTGGC...TCTGGGAGGAATGGACAGACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000555886.5
ENST00000557043.4
CDS-3UTR CCA 90 bp CATGCAGGCGTAGCACCATGTGAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCGCCAGGCTCAGGCCCTaGGGTGAAAGGAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: HAGVAPCETTGPGFQRSCARLRP*GERRQV
Trigger: CACCTGTCTCCTTTCACCCCAGGGCCTGAGCCTGGC...GCAGGACCTCTGAAACCCTGGACCAGTGGTCTCACATGGTGCTACGCCTGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR CCA 90 bp CATGCAGGCGTAGCACCATGTGAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCATCCCCATTGTAGGCTaGCCAGGCTCAGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: HAGVAPCETTGPGFQRSCIPIVG*PGSGPG
Trigger: CCCAGGGCCTGAGCCTGGCCAGCCTACAATGGGGAT...GCAGGACCTCTGAAACCCTGGACCAGTGGTCTCACATGGTGCTACGCCTGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR CCA 90 bp CCTGCTCAGGTGAATCGGCTGTGTTCTCACAAGTTCACGGAGCTGAGTGGGTGTCTCAAGGCCGCTCGCTaGTCCCTGGGATGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: PAQVNRLCSHKFTELSGCLKAAR*SLGCGA
Trigger: GGCCCCACATCCCAGGGACCAGCGAGCGGCCTTGAG...ACACCCACTCAGCTCCGTGAACTTGTGAGAACACAGCCGATTCACCTGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554012.5
CDS-3UTR CCA 90 bp GCTGCGATAAAGGGGGCTGCCTACAAAGCCCTTGGCTCCCGAAGTGGTAAGGGACTAGGGACCCTCAGATaGCAGCAGTCGGGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: AAIKGAAYKALGSRSGKGLGTLR*QQSGRG
Trigger: ACCCCTCCCCGACTGCTGCCATCTGAGGGTCCCTAG...TCCCTTACCACTTCGGGAGCCAAGGGCTTTGTAGGCAGCCCCCTTTATCGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555202.1
CDS-3UTR TCA 90 bp GGTAGTGCTAAGGCGAGCAGAGTGGGCTACAGGCAGGTCCTGCAGGCCCTGGGTCCAGAAACTGGAGTCTaGGGATCGGTATCGTCCATC +
Preference number: 4 (lower is better)
Translates to: GSAKASRVGYRQVLQALGPETGV*GSVSSI
Trigger: GATGGACGATACCGATCCTCAGACTCCAGTTTCTGG...ACCCAGGGCCTGCAGGACCTGCCTGTAGCCCACTCTGCTCGCCTTAGCACTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000557043.4
CDS-3UTR TCA 90 bp GATAGGCAGCAGGCTTGGGCCTATCTGGGTGGGGGTCATAGGCCTCCCCAGGACCCAGAAACTGGAGTCTaGGGATCGGTATCGTCCATC +
Preference number: 4 (lower is better)
Translates to: DRQQAWAYLGGGHRPPQDPETGV*GSVSSI
Trigger: GATGGACGATACCGATCCTCAGACTCCAGTTTCTGG...GTCCTGGGGAGGCCTATGACCCCCACCCAGATAGGCCCAAGCCTGCTGCCTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
CDS-3UTR TCA 90 bp CATGCAGGCGTAGCACCATGTGAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCTCCTTGAGCTGCACGTaGACCTGTGTGGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: HAGVAPCETTGPGFQRSCSLSCT*TCVGRQ
Trigger: CTGCCTGCCCACACAGGTTCACGTGCAGCTCAAGGA...GCAGGACCTCTGAAACCCTGGACCAGTGGTCTCACATGGTGCTACGCCTGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR TCA 90 bp TGCTGCGTCCCGGGATGTGGACCACTGACCCAGAGGCTTCTGAGTCCTGAGCACGAGGCTTCTGAGTCCTaGGCACAGATAAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: CCVPGCGPLTQRLLSPEHEASES*AQIRAP
Trigger: AGGAGCCCTTATCTGTGCTCAGGACTCAGAAGCCTC...GTGCTCAGGACTCAGAAGCCTCTGGGTCAGTGGTCCACATCCCGGGACGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR TCA 90 bp TACAGGCAGGTCCTGCAGGCCCTGGGTAGAGCTCATCCTCTGTCTGTCCATTCCGCAAGCCAAGGGTTCTaGGGGCTCATCCACAGGGCT +
Preference number: 4 (lower is better)
Translates to: YRQVLQALGRAHPLSVHSASQGF*GLIHRA
Trigger: AGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGC...GGAATGGACAGACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCTGCCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR TCA 90 bp GCCTATCTGGGTGGGGGTCATAGGCCTCCCCAGGACGACGTCTTCCCGACGCAAGCAGGGGTCCGAGTGTaGAATGATGGTCATCACTGT +
Preference number: 4 (lower is better)
Translates to: AYLGGGHRPPQDDVFPTQAGVRV*NDGHHC
Trigger: ACAGTGATGACCATCATTTCACACTCGGACCCCTGC...TTGCGTCGGGAAGACGTCGTCCTGGGGAGGCCTATGACCCCCACCCAGATAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
CDS-3UTR GCA 90 bp TCAGGTTCCGCTTGCCAGGGCTTCTCCAGGCGCAGAAAACCGGAATCCCTCCTGGGCAGCCAGGCGTGCTaGTTCTCGTCCAAATACACG +
Preference number: 4 (lower is better)
Translates to: SGSACQGFSRRRKPESLLGSQAC*FSSKYT
Trigger: CGTGTATTTGGACGAGAAGCAGCACGCCTGGCTGCC...CAGGAGGGATTCCGGTTTTCTGCGCCTGGAGAAGCCCTGGCAAGCGGAACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
CDS-3UTR GCA 90 bp TCTATCCCTTTTCCACGTGGGCAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGGCTACAGGCAGGTCCTaGAGGCCCTGGGTAGAGCTC +
Preference number: 4 (lower is better)
Translates to: SIPFPRGQAKGSEGSSTGATGRS*RPWVEL
Trigger: GAGCTCTACCCAGGGCCTGCAGGACCTGCCTGTAGC...CCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCCACGTGGAAAAGGGATAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000554012.5
CDS-3UTR GCA 90 bp AGGCTTGGGCCTATCTGGGTGGGGGTCATAGGCCTCCCCAGGACGACGTCTTCCCACTTCCTTAGGCCATaGATGCTCCTCTCAGGGACT +
Preference number: 4 (lower is better)
Translates to: RLGPIWVGVIGLPRTTSSHFLRP*MLLSGT
Trigger: AGTCCCTGAGAGGAGCATGCATGGCCTAAGGAAGTG...GGAAGACGTCGTCCTGGGGAGGCCTATGACCCCCACCCAGATAGGCCCAAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
CDS-3UTR CCA 90 bp GCTACAGGCAGGTCCTGCAGGCCCTGGGTAGAGCTCATCCTCTGTCTGTCCATTAGGCTTGGGCCTATCTaGGTGGGGGTCATAGGCCTC +
Preference number: 4 (lower is better)
Translates to: ATGRSCRPWVELILCLSIRLGPI*VGVIGL
Trigger: GAGGCCTATGACCCCCACCCAGATAGGCCCAAGCCT...AATGGACAGACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCTGCCTGTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000557043.4
CDS-3UTR CCA 90 bp GCTACAGGCAGGTCCTGCAGGCCCTGGGTAGAGCTCATCCTCTGTCTGTCCATTGATAGGCAGCAGGCTTaGGCCTATCTGGGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: ATGRSCRPWVELILCLSIDRQQA*AYLGGG
Trigger: ACCCCCACCCAGATAGGCCCAAGCCTGCTGCCTATC...AATGGACAGACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCTGCCTGTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000557043.4
CDS-3UTR CCA 90 bp GCACCATGTGAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCCAGGCTCAGGCCCTaGGGTGAAAGGAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: APCETTGPGFQRSCSGESARLRP*GERRQV
Trigger: CACCTGTCTCCTTTCACCCCAGGGCCTGAGCCTGGC...CGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGTGGTCTCACATGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR CCA 90 bp AGGCAGGTCCTGCAGGCCCTGGGTAGAGCTCATCCTCTGTCTGTCCATTCCTCCAGGTCCTGCAGGCCCTaGGTAGAGCTCATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: RQVLQALGRAHPLSVHSSRSCRP*VELILC
Trigger: ACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCT...GGAGGAATGGACAGACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000557043.4
CDS-3UTR CCA 90 bp CCACGTGGGCAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGGTTCACGGAGCTGAGTaGGTGTGCAACATGAAATAC +
Preference number: 4 (lower is better)
Translates to: PRGQAKGSEGSSTGLAGLVHGAE*VCNMKY
Trigger: GTATTTCATGTTGCACACCCACTCAGCTCCGTGAAC...CAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCCACGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR TCA 90 bp AAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGGCCTCCTGCTGAAATACTAGTGCTGTaGGGGACAGAAGGGACAGAA +
Preference number: 4 (lower is better)
Translates to: KPRVLRAHPQGSPAWPPAEILVL*GTEGTE
Trigger: TTCTGTCCCTTCTGTCCCTCACAGCACTAGTATTTC...AGCAGGAGGCCAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR TCA 90 bp GAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTGTGTTCTCCTTGAGCTGCACGTaGACCTGTGTGGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: ETTGPGFQRSCSGESAVFSLSCT*TCVGRQ
Trigger: CTGCCTGCCCACACAGGTTCACGTGCAGCTCAAGGA...GAACACAGCCGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGTGGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR TCA 90 bp TGCTGCGTCCCGGGATGTGGACCACTGACCCAGAGGCTTCTGAGTCCTGAGCACTTTCAGGCCTTTCCTTaGGCTGCACGTGAACCTGTG +
Preference number: 4 (lower is better)
Translates to: CCVPGCGPLTQRLLSPEHFQAFP*AAREPV
Trigger: CACAGGTTCACGTGCAGCTCAAGGAAAGGCCTGAAA...GTGCTCAGGACTCAGAAGCCTCTGGGTCAGTGGTCCACATCCCGGGACGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR TCA 90 bp CTTTTCCACGTGGGCAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGTTTCAGGCCTTTCCTTaGGCTGCACGTGAACCTGTG +
Preference number: 4 (lower is better)
Translates to: LFHVGKPRVLRAHPQGSPFQAFP*AAREPV
Trigger: CACAGGTTCACGTGCAGCTCAAGGAAAGGCCTGAAA...CGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCCACGTGGAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
CDS-3UTR TCA 90 bp TTGGCAGGAGTGGTAGTGCTAAGGCGAGCAGAGTGGGCTACAGGCAGGTCCTGCGAGGCTTCTGAGTCCTaGGCACAGATAAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LAGVVVLRRAEWATGRSCEASES*AQIRAP
Trigger: AGGAGCCCTTATCTGTGCTCAGGACTCAGAAGCCTC...GCAGGACCTGCCTGTAGCCCACTCTGCTCGCCTTAGCACTACCACTCCTGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR GCA 90 bp TGCCACATGATAGGCAGCAGGCTTGGGCCTATCTGGGTGGGGGTCATAGGCCTCAAGGGCAGCCAGGCGTaGTGCTTCTCGTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: CHMIGSRLGPIWVGVIGLKGSQA*CFSSKY
Trigger: GTATTTGGACGAGAAGCAGCACGCCTGGCTGCCCTT...GAGGCCTATGACCCCCACCCAGATAGGCCCAAGCCTGCTGCCTATCATGTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
CDS-3UTR CCA 90 bp CCAAATGGAATCCTCCTTGGCAGGAGTGGTAGTGCTAAGGCGAGCAGAGTGGGCAGGCTTGGGCCTATCTaGGTGGGGGTCATAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PNGILLGRSGSAKASRVGRLGPI*VGVIGL
Trigger: GAGGCCTATGACCCCCACCCAGATAGGCCCAAGCCT...GCCCACTCTGCTCGCCTTAGCACTACCACTCCTGCCAAGGAGGATTCCATTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR CCA 90 bp GGAGTGGTAGTGCTAAGGCGAGCAGAGTGGGCTACAGGCAGGTCCTGCAGGCCCCTAAGCGCCAGAAACTaGAGTCTGAGGATCGGTATC +
Preference number: 4 (lower is better)
Translates to: GVVVLRRAEWATGRSCRPLSARN*SLRIGI
Trigger: GATACCGATCCTCAGACTCCAGTTTCTGGCGCTTAG...GGGCCTGCAGGACCTGCCTGTAGCCCACTCTGCTCGCCTTAGCACTACCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000557043.4
CDS-3UTR CCA 90 bp CTAAGGCGAGCAGAGTGGGCTACAGGCAGGTCCTGCAGGCCCTGGGTAGAGCTCCTAAGCGCCAGAAACTaGAGTCTGAGGATCGGTATC +
Preference number: 4 (lower is better)
Translates to: LRRAEWATGRSCRPWVELLSARN*SLRIGI
Trigger: GATACCGATCCTCAGACTCCAGTTTCTGGCGCTTAG...GAGCTCTACCCAGGGCCTGCAGGACCTGCCTGTAGCCCACTCTGCTCGCCTTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000557043.4
CDS-3UTR CCA 90 bp TCAGGTTCCGCTTGCCAGGGCTTCTCCAGGCGCAGAAAACCGGAATCCCTCCTGCAGACCCCAGCGTGGTaGAGAAGACACAGGCATAGT +
Preference number: 4 (lower is better)
Translates to: SGSACQGFSRRRKPESLLQTPAW*RRHRHS
Trigger: ACTATGCCTGTGTCTTCTCCACCACGCTGGGGTCTG...CAGGAGGGATTCCGGTTTTCTGCGCCTGGAGAAGCCCTGGCAAGCGGAACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554119.5
CDS-3UTR CCA 90 bp ATAGGCCTCCCCAGGACGACGTCTTCCCGACGCAAGAGCACCCGTAACTGTAACTCCCAGACCCCAGCGTaGTGGAGAAGACACAGGCAT +
Preference number: 4 (lower is better)
Translates to: IGLPRTTSSRRKSTRNCNSQTPA*WRRHRH
Trigger: ATGCCTGTGTCTTCTCCACCACGCTGGGGTCTGGGA...GTTACAGTTACGGGTGCTCTTGCGTCGGGAAGACGTCGTCCTGGGGAGGCCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000555886.5
CDS-3UTR CCA 90 bp CATGTGAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTGGCACGTGAACCTGTGTaGGCAGGCAGCGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: HVRPLVQGFRGPAQVNRLAREPV*AGSVCR
Trigger: CCTGCAAACGCTGCCTGCCCACACAGGTTCACGTGC...CAGCCGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGTGGTCTCACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR CCA 90 bp ACCCAACCTCTATCCCTTTTCCACGTGGGCAAGCCAAGGGTTCTGAGGGCTCATCTGCGTCCCGGGATGTaGACCACTGACCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: TQPLSLFHVGKPRVLRAHLRPGM*TTDPEA
Trigger: AGCCTCTGGGTCAGTGGTCCACATCCCGGGACGCAG...ATGAGCCCTCAGAACCCTTGGCTTGCCCACGTGGAAAAGGGATAGAGGTTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
CDS-3UTR CCA 90 bp GGTAGTGCTAAGGCGAGCAGAGTGGGCTACAGGCAGGTCCTGCAGGCCCTGGGTGTAATTCCAGTGCTTTaGAAGGCAGAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GSAKASRVGYRQVLQALGVIPVL*KAEAGG
Trigger: TCCTCCTGCCTCTGCCTTCCAAAGCACTGGAATTAC...ACCCAGGGCCTGCAGGACCTGCCTGTAGCCCACTCTGCTCGCCTTAGCACTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000557043.4
CDS-3UTR CCA 90 bp CAGGTCCTGCAGGCCCTGGGTAGAGCTCATCCTCTGTCTGTCCATTCCTCCCAGGACCCTGTATCTCGATaGTTAAGGGCAGCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: QVLQALGRAHPLSVHSSQDPVSR*LRAARR
Trigger: ACGCCTGGCTGCCCTTAACCATCGAGATACAGGGTC...CTGGGAGGAATGGACAGACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000555886.5
CDS-3UTR CCA 90 bp CCCAGGACGACGTCTTCCCGACGCAAGAGCACCCGTAACTGTAACCTATCCTTTTCCTCTCAGGGACTCTaGCTGGGCCAGGACCACCAG +
Preference number: 4 (lower is better)
Translates to: PRTTSSRRKSTRNCNLSFSSQGL*LGQDHQ
Trigger: CTGGTGGTCCTGGCCCAGCCAGAGTCCCTGAGAGGA...AAAGGATAGGTTACAGTTACGGGTGCTCTTGCGTCGGGAAGACGTCGTCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
CDS-3UTR CCA 90 bp GGAGACAGGTGCTGCCAAGACCATACATCAGTCATCTGGCAGCAGCTCGAGAAGTCCTCTCAGGGACTCTaGCTGGGCCAGGACCACCAG +
Preference number: 4 (lower is better)
Translates to: GDRCCQDHTSVIWQQLEKSSQGL*LGQDHQ
Trigger: CTGGTGGTCCTGGCCCAGCCAGAGTCCCTGAGAGGA...CTTCTCGAGCTGCTGCCAGATGACTGATGTATGGTCTTGGCAGCACCTGTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555886.5
ENST00000556156.1
CDS-3UTR TCA 90 bp CTTTTCCACGTGGGCAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGACAAGTTCACGGAGCTaGGTGGGTGTGCAACATGAA +
Preference number: 4 (lower is better)
Translates to: LFHVGKPRVLRAHPQGSPTSSRS*VGVQHE
Trigger: TTCATGTTGCACACCCACTCAGCTCCGTGAACTTGT...CGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCCACGTGGAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
CDS-3UTR TCA 90 bp GCTACAGGCAGGTCCTGCAGGCCCTGGGTAGAGCTCATCCTCTGTCTGTCCATTGAGGTCCTGCTCAGGTaGATCGGCTGTGTTCTCACA +
Preference number: 4 (lower is better)
Translates to: ATGRSCRPWVELILCLSIEVLLR*IGCVLT
Trigger: TGTGAGAACACAGCCGATTCACCTGAGCAGGACCTC...AATGGACAGACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCTGCCTGTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR TCA 90 bp GAAGGTGAACAGAAACACAACATCCCCATTGTAGGCTGGCCAGGCTCAGGCCCTGCAAGCCAAGGGTTCTaGGGGCTCATCCACAGGGCT +
Preference number: 4 (lower is better)
Translates to: EGEQKHNIPIVGWPGSGPASQGF*GLIHRA
Trigger: AGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGC...AGGGCCTGAGCCTGGCCAGCCTACAATGGGGATGTTGTGTTTCTGTTCACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR GCA 90 bp GTGGGCAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGGCCTTTTTTATTTGGGGGCTaGCTATTCTCACTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: VGKPRVLRAHPQGSPAWPFLFGG*LFSLLS
Trigger: GGAGAGAAGTGAGAATAGGCAGCCCCCAAATAAAAA...AGGCCAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCCAC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000554012.5
CDS-3UTR GCA 90 bp GTATCGTCCATCAGGGTAGAGCTGCCACATGATAGGCAGCAGGCTTGGGCCTATCTTTCAGGTTCCGCTTaGCAGGGCTTCTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: VSSIRVELPHDRQQAWAYLSGSA*QGFSRR
Trigger: GCGCCTGGAGAAGCCCTGGCAAGCGGAACCTGAAAG...ATAGGCCCAAGCCTGCTGCCTATCATGTGGCAGCTCTACCCTGATGGACGATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
CDS-3UTR GCA 90 bp GCTGCCAAGACCATACATCAGTCATCTGGCAGCAGCTCGAGAAGCATGTCCTCCCTTTCAGGTTCCGCTTaGCAGGGCTTCTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: AAKTIHQSSGSSSRSMSSLSGSA*QGFSRR
Trigger: GCGCCTGGAGAAGCCCTGGCAAGCGGAACCTGAAAG...GGAGGACATGCTTCTCGAGCTGCTGCCAGATGACTGATGTATGGTCTTGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556156.1
CDS-3UTR GCA 90 bp ATGAGCAGCTGCGATAAAGGGGGCTGCCTACAAAGCCCTTGGCTCCCGAAGTGGTGCGATAAAGGGGGCTaGCTACAAAGCCCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: MSSCDKGGCLQSPWLPKWCDKGG*LQSPWL
Trigger: GAGCCAAGGGCTTTGTAGGCAGCCCCCTTTATCGCA...CCACTTCGGGAGCCAAGGGCTTTGTAGGCAGCCCCCTTTATCGCAGCTGCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555202.1
CDS-3UTR CCA 90 bp CTGGCCTCCTGCTGCGTCCCGGGATGTGGACCACTGACCCAGAGGCTTCTGAGTTATCCTTTATCTCGATaGTTAAGGGCAGCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: LASCCVPGCGPLTQRLLSYPLSR*LRAARR
Trigger: ACGCCTGGCTGCCCTTAACCATCGAGATAAAGGATA...ACTCAGAAGCCTCTGGGTCAGTGGTCCACATCCCGGGACGCAGCAGGAGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
CDS-3UTR CCA 90 bp GCCATCCACCCATCTGGGCAGGGGTCCGAGTGTGAAATGATGGTCATCACTGTTAGGCTTGGGCCTATCTaGGTGGGGGTCATAGGCCTC +
Preference number: 4 (lower is better)
Translates to: AIHPSGQGSECEMMVITVRLGPI*VGVIGL
Trigger: GAGGCCTATGACCCCCACCCAGATAGGCCCAAGCCT...AACAGTGATGACCATCATTTCACACTCGGACCCCTGCCCAGATGGGTGGATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
CDS-3UTR CCA 90 bp TGTTCCCTGAAGCTCACTTCCTTAGGCCATGCATGCTCCTCTCAGGGACTCTGGAGGCTTGGGCCTATCTaGGTGGGGGTCATAGGCCTC +
Preference number: 4 (lower is better)
Translates to: CSLKLTSLGHACSSQGLWRLGPI*VGVIGL
Trigger: GAGGCCTATGACCCCCACCCAGATAGGCCCAAGCCT...CCAGAGTCCCTGAGAGGAGCATGCATGGCCTAAGGAAGTGAGCTTCAGGGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
CDS-3UTR CCA 90 bp CAGGCGTGTTTACATGCAGGCGTAGCACCATGTGAGACCACTGGTCCAGGGTTTAGGCTTGGGCCTATCTaGGTGGGGGTCATAGGCCTC +
Preference number: 4 (lower is better)
Translates to: QACLHAGVAPCETTGPGFRLGPI*VGVIGL
Trigger: GAGGCCTATGACCCCCACCCAGATAGGCCCAAGCCT...AAACCCTGGACCAGTGGTCTCACATGGTGCTACGCCTGCATGTAAACACGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR CCA 90 bp ATAAAGGGGGCTGCCTACAAAGCCCTTGGCTCCCGAAGTGGTAAGGGAGACATGGATAGGCAGCAGGCTTaGGCCTATCTGGGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: IKGAAYKALGSRSGKGDMDRQQA*AYLGGG
Trigger: ACCCCCACCCAGATAGGCCCAAGCCTGCTGCCTATC...CATGTCTCCCTTACCACTTCGGGAGCCAAGGGCTTTGTAGGCAGCCCCCTTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555202.1
CDS-3UTR CCA 90 bp GTTCCGCTTGCCAGGGCTTCTCCAGGCGCAGAAAACCGGAATCCCTCCTGCCAGCTAAGCGCCAGAAACTaGAGTCTGAGGATCGGTATC +
Preference number: 4 (lower is better)
Translates to: VPLARASPGAENRNPSCQLSARN*SLRIGI
Trigger: GATACCGATCCTCAGACTCCAGTTTCTGGCGCTTAG...CTGGCAGGAGGGATTCCGGTTTTCTGCGCCTGGAGAAGCCCTGGCAAGCGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
CDS-3UTR CCA 90 bp CCTATCCTTTATTTCCTTAGGCCATGCATGCTCCTCTCAGGGACTCTGGCTGGGATCCCCATTGTAGGCTaGCCAGGCTCAGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PILYFLRPCMLLSGTLAGIPIVG*PGSGPG
Trigger: CCCAGGGCCTGAGCCTGGCCAGCCTACAATGGGGAT...CCCAGCCAGAGTCCCTGAGAGGAGCATGCATGGCCTAAGGAAATAAAGGATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555886.5
CDS-3UTR CCA 90 bp AGGTCCTGCAGGCCCTGGGTAGAGCTCATCCTCTGTCTGTCCATTCCTCCCAGACAGACCCCAGCGTGGTaGAGAAGACACAGGCATAGT +
Preference number: 4 (lower is better)
Translates to: RSCRPWVELILCLSIPPRQTPAW*RRHRHS
Trigger: ACTATGCCTGTGTCTTCTCCACCACGCTGGGGTCTG...TCTGGGAGGAATGGACAGACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000555886.5
ENST00000557043.4
CDS-3UTR CCA 90 bp ATAGGCCTCCCCAGGACGACGTCTTCCCGACGCAAGAGCACCCGTAACTGTAACCAGACCCCAGCGTGGTaGAGAAGACACAGGCATAGT +
Preference number: 4 (lower is better)
Translates to: IGLPRTTSSRRKSTRNCNQTPAW*RRHRHS
Trigger: ACTATGCCTGTGTCTTCTCCACCACGCTGGGGTCTG...GTTACAGTTACGGGTGCTCTTGCGTCGGGAAGACGTCGTCCTGGGGAGGCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000555886.5
CDS-3UTR CCA 90 bp CCATGTGAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTTCCCAGACCCCAGCGTaGTGGAGAAGACACAGGCAT +
Preference number: 4 (lower is better)
Translates to: PCETTGPGFQRSCSGESASQTPA*WRRHRH
Trigger: ATGCCTGTGTCTTCTCCACCACGCTGGGGTCTGGGA...AGCCGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGTGGTCTCACATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR CCA 90 bp GTGCTAAGGCGAGCAGAGTGGGCTACAGGCAGGTCCTGCAGGCCCTGGGTAGAGGTTCACGGAGCTGAGTaGGTGTGCAACATGAAATAC +
Preference number: 4 (lower is better)
Translates to: VLRRAEWATGRSCRPWVEVHGAE*VCNMKY
Trigger: GTATTTCATGTTGCACACCCACTCAGCTCCGTGAAC...CTCTACCCAGGGCCTGCAGGACCTGCCTGTAGCCCACTCTGCTCGCCTTAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR CCA 90 bp AGGGACAGAAAGAGGCTGAAGACCATCATCCAGCTGAGAAAAGCCGAGGCACAGCTGCGTCCCGGGATGTaGACCACTGACCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RDRKRLKTIIQLRKAEAQLRPGM*TTDPEA
Trigger: AGCCTCTGGGTCAGTGGTCCACATCCCGGGACGCAG...CTGTGCCTCGGCTTTTCTCAGCTGGATGATGGTCTTCAGCCTCTTTCTGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR CCA 90 bp ACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTGTGTTCTCACAACTGCGTCCCGGGATGTaGACCACTGACCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: TGPGFQRSCSGESAVFSQLRPGM*TTDPEA
Trigger: AGCCTCTGGGTCAGTGGTCCACATCCCGGGACGCAG...TTGTGAGAACACAGCCGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR CCA 90 bp CTTTCAGGTTCCGCTTGCCAGGGCTTCTCCAGGCGCAGAAAACCGGAATCCCTCGACCCTGTATCTCGATaGTTAAGGGCAGCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: LSGSACQGFSRRRKPESLDPVSR*LRAARR
Trigger: ACGCCTGGCTGCCCTTAACCATCGAGATACAGGGTC...GAGGGATTCCGGTTTTCTGCGCCTGGAGAAGCCCTGGCAAGCGGAACCTGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
CDS-3UTR TCA 90 bp TCTATCCCTTTTCCACGTGGGCAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGAGACCATCATCCAGCTaGGAAAAGCCGAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: SIPFPRGQAKGSEGSSTGRPSSS*EKPRHR
Trigger: CCTGTGCCTCGGCTTTTCTCAGCTGGATGATGGTCT...CCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCCACGTGGAAAAGGGATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000554012.5
CDS-3UTR TCA 90 bp GAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTGTGTTCGAGGTCCTGCTCAGGTaGATCGGCTGTGTTCTCACA +
Preference number: 4 (lower is better)
Translates to: ETTGPGFQRSCSGESAVFEVLLR*IGCVLT
Trigger: TGTGAGAACACAGCCGATTCACCTGAGCAGGACCTC...GAACACAGCCGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGTGGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR TCA 90 bp CATGTGAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTGGAGGTCCTGCTCAGGTaGATCGGCTGTGTTCTCACA +
Preference number: 4 (lower is better)
Translates to: HVRPLVQGFRGPAQVNRLEVLLR*IGCVLT
Trigger: TGTGAGAACACAGCCGATTCACCTGAGCAGGACCTC...CAGCCGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGTGGTCTCACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR TCA 90 bp ACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTGTGTTCTCACAATCCTTGAGCTGCACGTaGACCTGTGTGGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: TGPGFQRSCSGESAVFSQSLSCT*TCVGRQ
Trigger: CTGCCTGCCCACACAGGTTCACGTGCAGCTCAAGGA...TTGTGAGAACACAGCCGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR TCA 90 bp TACAGGCAGGTCCTGCAGGCCCTGGGTAGAGCTCATCCTCTGTCTGTCCATTCCTTTCAGGCCTTTCCTTaGGCTGCACGTGAACCTGTG +
Preference number: 4 (lower is better)
Translates to: YRQVLQALGRAHPLSVHSFQAFP*AAREPV
Trigger: CACAGGTTCACGTGCAGCTCAAGGAAAGGCCTGAAA...GGAATGGACAGACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCTGCCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR TCA 90 bp GCACCATGTGAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGAGGCTTCTGAGTCCTaGGCACAGATAAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: APCETTGPGFQRSCSGESEASES*AQIRAP
Trigger: AGGAGCCCTTATCTGTGCTCAGGACTCAGAAGCCTC...CGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGTGGTCTCACATGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR TCA 90 bp CAGGTCCTGCAGGCCCTGGGTAGAGCTCATCCTCTGTCTGTCCATTCCTCCCAGGGTCCGAGTGTGAAATaGTGGTCATCACTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: QVLQALGRAHPLSVHSSQGPSVK*WSSLFP
Trigger: AGGGAACAGTGATGACCATCATTTCACACTCGGACC...CTGGGAGGAATGGACAGACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554119.5
CDS-3UTR GCA 90 bp CAGGCGTGTTTACATGCAGGCGTAGCACCATGTGAGACCACTGGTCCAGGGTTTGGCAGCCAGGCGTGCTaGTTCTCGTCCAAATACACG +
Preference number: 4 (lower is better)
Translates to: QACLHAGVAPCETTGPGFGSQAC*FSSKYT
Trigger: CGTGTATTTGGACGAGAAGCAGCACGCCTGGCTGCC...AAACCCTGGACCAGTGGTCTCACATGGTGCTACGCCTGCATGTAAACACGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
CDS-3UTR GCA 90 bp ATAAAGGGGGCTGCCTACAAAGCCCTTGGCTCCCGAAGTGGTAAGGGAGACATGGGCAGCCAGGCGTGCTaGTTCTCGTCCAAATACACG +
Preference number: 4 (lower is better)
Translates to: IKGAAYKALGSRSGKGDMGSQAC*FSSKYT
Trigger: CGTGTATTTGGACGAGAAGCAGCACGCCTGGCTGCC...CATGTCTCCCTTACCACTTCGGGAGCCAAGGGCTTTGTAGGCAGCCCCCTTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555202.1
CDS-3UTR GCA 90 bp CATGTGAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTGAAGGGCAGCCAGGCGTaGTGCTTCTCGTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: HVRPLVQGFRGPAQVNRLKGSQA*CFSSKY
Trigger: GTATTTGGACGAGAAGCAGCACGCCTGGCTGCCCTT...CAGCCGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGTGGTCTCACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
CDS-3UTR GCA 90 bp CCATGTGAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTAAGGGCAGCCAGGCGTaGTGCTTCTCGTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: PCETTGPGFQRSCSGESAKGSQA*CFSSKY
Trigger: GTATTTGGACGAGAAGCAGCACGCCTGGCTGCCCTT...AGCCGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGTGGTCTCACATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
CDS-3UTR GCA 90 bp GGTTCCGCTTGCCAGGGCTTCTCCAGGCGCAGAAAACCGGAATCCCTCCTGCCAGTGAAAGGAGACAGGTaGTGCCAAGACCATACATCA +
Preference number: 4 (lower is better)
Translates to: GSACQGFSRRRKPESLLPVKGDR*CQDHTS
Trigger: TGATGTATGGTCTTGGCAGCACCTGTCTCCTTTCAC...TGGCAGGAGGGATTCCGGTTTTCTGCGCCTGGAGAAGCCCTGGCAAGCGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556156.1
CDS-3UTR GCA 90 bp TTCAGGCCTTTCCTTGAGCTGCACGTGAACCTGTGTGGGCAGGCAGCGTTTGCAGGGTTTCAGAGGTCCTaGTCAGGTGAATCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: FRPFLELHVNLCGQAAFAGFQRS*SGESAV
Trigger: CACAGCCGATTCACCTGAGCAGGACCTCTGAAACCC...TGCAAACGCTGCCTGCCCACACAGGTTCACGTGCAGCTCAAGGAAAGGCCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR GCA 90 bp TCAGGTTCCGCTTGCCAGGGCTTCTCCAGGCGCAGAAAACCGGAATCCCTCCTGGTGAAAGGAGACAGGTaGTGCCAAGACCTTGATGTG +
Preference number: 4 (lower is better)
Translates to: SGSACQGFSRRRKPESLLVKGDR*CQDLDV
Trigger: CACATCAAGGTCTTGGCAGCACCTGTCTCCTTTCAC...CAGGAGGGATTCCGGTTTTCTGCGCCTGGAGAAGCCCTGGCAAGCGGAACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554119.5
CDS-3UTR CCA 90 bp GTGAAGTACTTTATAGATATGAGCAGCTGCGATAAAGGGGGCTGCCTACAAAGCCACAGGCGGTCCGGGTaGTCGGTGACTGCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: VKYFIDMSSCDKGGCLQSHRRSG*SVTASP
Trigger: CGGGGAGGCAGTCACCGACCACCCGGACCGCCTGTG...GCTTTGTAGGCAGCCCCCTTTATCGCAGCTGCTCATATCTATAAAGTACTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555202.1
CDS-3UTR CCA 90 bp CAGAAGGGACAGAAAGAGGCTGAAGACCATCATCCAGCTGAGAAAAGCCGAGGCAGGCTTGGGCCTATCTaGGTGGGGGTCATAGGCCTC +
Preference number: 4 (lower is better)
Translates to: QKGQKEAEDHHPAEKSRGRLGPI*VGVIGL
Trigger: GAGGCCTATGACCCCCACCCAGATAGGCCCAAGCCT...GCCTCGGCTTTTCTCAGCTGGATGATGGTCTTCAGCCTCTTTCTGTCCCTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR CCA 90 bp CCCCAGCGTGGTGGAGAAGACACAGGCATAGTAAACGAAGGTGAACAGAAACACATCCCCATTGTAGGCTaGCCAGGCTCAGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PQRGGEDTGIVNEGEQKHIPIVG*PGSGPG
Trigger: CCCAGGGCCTGAGCCTGGCCAGCCTACAATGGGGAT...GTGTTTCTGTTCACCTTCGTTTACTATGCCTGTGTCTTCTCCACCACGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000555886.5
ENST00000557043.4
CDS-3UTR CCA 90 bp TCTATCCCTTTTCCACGTGGGCAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCAGACCCCAGCGTGGTaGAGAAGACACAGGCATAGT +
Preference number: 4 (lower is better)
Translates to: SIPFPRGQAKGSEGSSTGQTPAW*RRHRHS
Trigger: ACTATGCCTGTGTCTTCTCCACCACGCTGGGGTCTG...CCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCCACGTGGAAAAGGGATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000554012.5
CDS-3UTR CCA 90 bp GAAGGTGAACAGAAACACAACATCCCCATTGTAGGCTGGCCAGGCTCAGGCCCTTCCCAGACCCCAGCGTaGTGGAGAAGACACAGGCAT +
Preference number: 4 (lower is better)
Translates to: EGEQKHNIPIVGWPGSGPSQTPA*WRRHRH
Trigger: ATGCCTGTGTCTTCTCCACCACGCTGGGGTCTGGGA...AGGGCCTGAGCCTGGCCAGCCTACAATGGGGATGTTGTGTTTCTGTTCACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000555886.5
ENST00000557043.4
CDS-3UTR CCA 90 bp GAAGGTGAACAGAAACACAACATCCCCATTGTAGGCTGGCCAGGCTCAGGCCCTAGGTCCTGCAGGCCCTaGGTAGAGCTCATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: EGEQKHNIPIVGWPGSGPRSCRP*VELILC
Trigger: ACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCT...AGGGCCTGAGCCTGGCCAGCCTACAATGGGGATGTTGTGTTTCTGTTCACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000555886.5
ENST00000557043.4
CDS-3UTR CCA 90 bp TATCTGGGTGGGGGTCATAGGCCTCCCCAGGACGACGTCTTCCCGACGCAAGAGGCCAAGACCTTGATGTaGTACACTAAGCGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: YLGGGHRPPQDDVFPTQEAKTLM*YTKRQK
Trigger: TTTCTGGCGCTTAGTGTACCACATCAAGGTCTTGGC...CTCTTGCGTCGGGAAGACGTCGTCCTGGGGAGGCCTATGACCCCCACCCAGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554119.5
CDS-3UTR TCA 90 bp CTAAGGCGAGCAGAGTGGGCTACAGGCAGGTCCTGCAGGCCCTGGGTAGAGCTCAACCTATCCTTTATCTaGGGAGAAGAAAAGGACAGG +
Preference number: 4 (lower is better)
Translates to: LRRAEWATGRSCRPWVELNLSFI*GEEKDR
Trigger: CCTGTCCTTTTCTTCTCCTCAGATAAAGGATAGGTT...GAGCTCTACCCAGGGCCTGCAGGACCTGCCTGTAGCCCACTCTGCTCGCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554119.5
CDS-3UTR TCA 90 bp TTCTTTCTGATACAGCCACTGTGGACTAAGAGGGGTCAGGCTCCAGTGGAGCTCGTGGTAAGGGAGACATaGGTGCCTCCAGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: FFLIQPLWTKRGQAPVELVVRET*VPPGSL
Trigger: GAGGCTTCCTGGAGGCACTCATGTCTCCCTTACCAC...GAGCTCCACTGGAGCCTGACCCCTCTTAGTCCACAGTGGCTGTATCAGAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555202.1
CDS-3UTR GCA 90 bp CACTTCTCTCCACCAGAATCTAAGTCAAGGATAGAAGCTGATTCCGCACGAAGTCGGGTGGTCGGTGACTaGCTCCCCGAGTGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: HFSPPESKSRIEADSARSRVVGD*LPECRA
Trigger: TGCCCGACACTCGGGGAGGCAGTCACCGACCACCCG...ACTTCGTGCGGAATCAGCTTCTATCCTTGACTTAGATTCTGGTGGAGAGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000554012.5
CDS-3UTR GCA 90 bp ACCCAACCTCTATCCCTTTTCCACGTGGGCAAGCCAAGGGTTCTGAGGGCTCATAAGGGCAGCCAGGCGTaGTGCTTCTCGTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: TQPLSLFHVGKPRVLRAHKGSQA*CFSSKY
Trigger: GTATTTGGACGAGAAGCAGCACGCCTGGCTGCCCTT...ATGAGCCCTCAGAACCCTTGGCTTGCCCACGTGGAAAAGGGATAGAGGTTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
CDS-3UTR GCA 90 bp ATAAAGGGGGCTGCCTACAAAGCCCTTGGCTCCCGAAGTGGTAAGGGAGACATGAAGGGCAGCCAGGCGTaGTGCTTCTCGTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: IKGAAYKALGSRSGKGDMKGSQA*CFSSKY
Trigger: GTATTTGGACGAGAAGCAGCACGCCTGGCTGCCCTT...CATGTCTCCCTTACCACTTCGGGAGCCAAGGGCTTTGTAGGCAGCCCCCTTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555202.1
CDS-3UTR GCA 90 bp GCTGCCAAGACCATACATCAGTCATCTGGCAGCAGCTCGAGAAGCATGTCCTCCAAGGGCAGCCAGGCGTaGTGCTTCTCGTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: AAKTIHQSSGSSSRSMSSKGSQA*CFSSKY
Trigger: GTATTTGGACGAGAAGCAGCACGCCTGGCTGCCCTT...GGAGGACATGCTTCTCGAGCTGCTGCCAGATGACTGATGTATGGTCTTGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555886.5
ENST00000556156.1
CDS-3UTR GCA 90 bp CATTCCTCCCAGACCCCAGCGTGGTGGAGAAGACACAGGCATAGTAAACGAAGGGGGTTTCAGAGGTCCTaGTCAGGTGAATCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: HSSQTPAWWRRHRHSKRRGFQRS*SGESAV
Trigger: CACAGCCGATTCACCTGAGCAGGACCTCTGAAACCC...CCTTCGTTTACTATGCCTGTGTCTTCTCCACCACGCTGGGGTCTGGGAGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR GCA 90 bp ATACATCAGTCATCTGGCAGCAGCTCGAGAAGCATGTCCTCCACGCCGTCAATCAACCGGAATCCCTCCTaGCAGCCATCCACCCATCTG +
Preference number: 4 (lower is better)
Translates to: IHQSSGSSSRSMSSTPSINRNPS*QPSTHL
Trigger: CAGATGGGTGGATGGCTGGCAGGAGGGATTCCGGTT...GATTGACGGCGTGGAGGACATGCTTCTCGAGCTGCTGCCAGATGACTGATGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556156.1
CDS-3UTR CCA 90 bp CCCCAGCGTGGTGGAGAAGACACAGGCATAGTAAACGAAGGTGAACAGAAACACGATAGGCAGCAGGCTTaGGCCTATCTGGGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: PQRGGEDTGIVNEGEQKHDRQQA*AYLGGG
Trigger: ACCCCCACCCAGATAGGCCCAAGCCTGCTGCCTATC...GTGTTTCTGTTCACCTTCGTTTACTATGCCTGTGTCTTCTCCACCACGCTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000555886.5
ENST00000557043.4
CDS-3UTR CCA 90 bp AGAAGGGACAGAAAGAGGCTGAAGACCATCATCCAGCTGAGAAAAGCCGAGGCAGATAGGCAGCAGGCTTaGGCCTATCTGGGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: RRDRKRLKTIIQLRKAEADRQQA*AYLGGG
Trigger: ACCCCCACCCAGATAGGCCCAAGCCTGCTGCCTATC...TGCCTCGGCTTTTCTCAGCTGGATGATGGTCTTCAGCCTCTTTCTGTCCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR CCA 90 bp TGCCACATGATAGGCAGCAGGCTTGGGCCTATCTGGGTGGGGGTCATAGGCCTCCATACATCAGTCATCTaGCAGCAGCTCGAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: CHMIGSRLGPIWVGVIGLHTSVI*QQLEKH
Trigger: ATGCTTCTCGAGCTGCTGCCAGATGACTGATGTATG...GAGGCCTATGACCCCCACCCAGATAGGCCCAAGCCTGCTGCCTATCATGTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555886.5
ENST00000556156.1
CDS-3UTR CCA 90 bp GAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTGTGTTCAGGCACAGGTATAGCTaGGCACCTGGAAGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: ETTGPGFQRSCSGESAVFRHRYS*APGRSS
Trigger: AGAGCTTCTTCCAGGTGCCCAGCTATACCTGTGCCT...GAACACAGCCGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGTGGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR CCA 90 bp GACAGAAGGGACAGAAAGAGGCTGAAGACCATCATCCAGCTGAGAAAAGCCGAGGCACGTGAACCTGTGTaGGCAGGCAGCGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: DRRDRKRLKTIIQLRKAEAREPV*AGSVCR
Trigger: CCTGCAAACGCTGCCTGCCCACACAGGTTCACGTGC...CTCGGCTTTTCTCAGCTGGATGATGGTCTTCAGCCTCTTTCTGTCCCTTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR CCA 90 bp CTGAAGCTCACTTCCTTAGGCCATGCATGCTCCTCTCAGGGACTCTGGCTGGGCGTAATTCCAGTGCTTTaGAAGGCAGAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LKLTSLGHACSSQGLWLGVIPVL*KAEAGG
Trigger: TCCTCCTGCCTCTGCCTTCCAAAGCACTGGAATTAC...GCCCAGCCAGAGTCCCTGAGAGGAGCATGCATGGCCTAAGGAAGTGAGCTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
CDS-3UTR TCA 90 bp GCTGCCAAGACCATACATCAGTCATCTGGCAGCAGCTCGAGAAGCATGTCCTCCCCAGAAACTGGAGTCTaGGGATCGGTATCGTCCATC +
Preference number: 4 (lower is better)
Translates to: AAKTIHQSSGSSSRSMSSPETGV*GSVSSI
Trigger: GATGGACGATACCGATCCTCAGACTCCAGTTTCTGG...GGAGGACATGCTTCTCGAGCTGCTGCCAGATGACTGATGTATGGTCTTGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555886.5
ENST00000556156.1
CDS-3UTR TCA 90 bp CTTTTCCACGTGGGCAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGCATAGTAAACGAAGGTaGACAGAAACACAACATCCC +
Preference number: 4 (lower is better)
Translates to: LFHVGKPRVLRAHPQGSPHSKRR*TETQHP
Trigger: GGGATGTTGTGTTTCTGTTCACCTTCGTTTACTATG...CGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCCACGTGGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000554012.5
CDS-3UTR TCA 90 bp ACCCAACCTCTATCCCTTTTCCACGTGGGCAAGCCAAGGGTTCTGAGGGCTCATTTTCAGGCCTTTCCTTaGGCTGCACGTGAACCTGTG +
Preference number: 4 (lower is better)
Translates to: TQPLSLFHVGKPRVLRAHFQAFP*AAREPV
Trigger: CACAGGTTCACGTGCAGCTCAAGGAAAGGCCTGAAA...ATGAGCCCTCAGAACCCTTGGCTTGCCCACGTGGAAAAGGGATAGAGGTTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
CDS-3UTR TCA 90 bp GCCATCCACCCATCTGGGCAGGGGTCCGAGTGTGAAATGATGGTCATCACTGTTGCAGGGGTCCGAGTGTaGAATGATGGTCATCACTGT +
Preference number: 4 (lower is better)
Translates to: AIHPSGQGSECEMMVITVAGVRV*NDGHHC
Trigger: ACAGTGATGACCATCATTTCACACTCGGACCCCTGC...AACAGTGATGACCATCATTTCACACTCGGACCCCTGCCCAGATGGGTGGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
CDS-3UTR GCA 90 bp AACGAAGGTGAACAGAAACACAACATCCCCATTGTAGGCTGGCCAGGCTCAGGCTCCTTAGGCCATGCATaGTCCTCTCAGGGACTCTGG +
Preference number: 4 (lower is better)
Translates to: NEGEQKHNIPIVGWPGSGSLGHA*SSQGLW
Trigger: CCAGAGTCCCTGAGAGGAGCATGCATGGCCTAAGGA...GCCTGAGCCTGGCCAGCCTACAATGGGGATGTTGTGTTTCTGTTCACCTTCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
CDS-3UTR GCA 90 bp CATGCAGGCGTAGCACCATGTGAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCGTGAAAGGAGACAGGTaGTGCCAAGACATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: HAGVAPCETTGPGFQRSCVKGDR*CQDISH
Trigger: ATGACTGATGTCTTGGCAGCACCTGTCTCCTTTCAC...GCAGGACCTCTGAAACCCTGGACCAGTGGTCTCACATGGTGCTACGCCTGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554012.5
CDS-3UTR CCA 90 bp ATGAGCAGCTGCGATAAAGGGGGCTGCCTACAAAGCCCTTGGCTCCCGAAGTGGTATCCTTTATCTCGATaGTTAAGGGCAGCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: MSSCDKGGCLQSPWLPKWYPLSR*LRAARR
Trigger: ACGCCTGGCTGCCCTTAACCATCGAGATAAAGGATA...CCACTTCGGGAGCCAAGGGCTTTGTAGGCAGCCCCCTTTATCGCAGCTGCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555202.1
CDS-3UTR CCA 90 bp CCATGTGAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTCTAAGCGCCAGAAACTaGAGTCTGAGGATCGGTATC +
Preference number: 4 (lower is better)
Translates to: PCETTGPGFQRSCSGESALSARN*SLRIGI
Trigger: GATACCGATCCTCAGACTCCAGTTTCTGGCGCTTAG...AGCCGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGTGGTCTCACATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR CCA 90 bp AGGCCTTTCCTTGAGCTGCACGTGAACCTGTGTGGGCAGGCAGCGTTTGCAGGCCCGTCAATCTTGATGTaGTACACTAAGCGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: RPFLELHVNLCGQAAFAGPSILM*YTKRQK
Trigger: TTTCTGGCGCTTAGTGTACCACATCAAGATTGACGG...GCCTGCAAACGCTGCCTGCCCACACAGGTTCACGTGCAGCTCAAGGAAAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR CCA 90 bp CATGCAGGCGTAGCACCATGTGAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCCATACATCAGTCATCTaGCAGCAGCTCGAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: HAGVAPCETTGPGFQRSCHTSVI*QQLEKH
Trigger: ATGCTTCTCGAGCTGCTGCCAGATGACTGATGTATG...GCAGGACCTCTGAAACCCTGGACCAGTGGTCTCACATGGTGCTACGCCTGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000557043.4
CDS-3UTR CCA 90 bp CCCGACGCAAGAGCACCCGTAACTGTAACCTATCCTTTATCTGAGGAGAAGAAAGCCAGGCTCAGGCCCTaGGGTGAAAGGAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: PDARAPVTVTYPLSEEKKARLRP*GERRQV
Trigger: CACCTGTCTCCTTTCACCCCAGGGCCTGAGCCTGGC...TTTCTTCTCCTCAGATAAAGGATAGGTTACAGTTACGGGTGCTCTTGCGTCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
CDS-3UTR CCA 90 bp CCCGACGCAAGAGCACCCGTAACTGTAACCTATCCTTTATCTGAGGAGAAGAAAATCCCCATTGTAGGCTaGCCAGGCTCAGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PDARAPVTVTYPLSEEKKIPIVG*PGSGPG
Trigger: CCCAGGGCCTGAGCCTGGCCAGCCTACAATGGGGAT...TTTCTTCTCCTCAGATAAAGGATAGGTTACAGTTACGGGTGCTCTTGCGTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
CDS-3UTR CCA 90 bp AGGTCCTGCAGGCCCTGGGTAGAGCTCATCCTCTGTCTGTCCATTCCTCCCAGAGTTCACGGAGCTGAGTaGGTGTGCAACATGAAATAC +
Preference number: 4 (lower is better)
Translates to: RSCRPWVELILCLSIPPRVHGAE*VCNMKY
Trigger: GTATTTCATGTTGCACACCCACTCAGCTCCGTGAAC...TCTGGGAGGAATGGACAGACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
3UTR CAA 72 bp GAGAAGAAAAGGACAGGGCATACTTTCAGGTTCCGCTaGCCAGGGCTTCTCCAGGCGCAGAAAACCGGAATC +
Preference number: 4 (lower is better)
Translates to: EKKRTGHTFRFR*PGLLQAQKTGI
Trigger: GATTCCGGTTTTCTGCGCCTGGAGAAGCCCTGGCAAGCGGAACCTGAAAGTATGCCCTGTCCTTTTCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
CDS-3UTR TCA 90 bp TTCTTTCTGATACAGCCACTGTGGACTAAGAGGGGTCAGGCTCCAGTGGAGCTCCCAGAAACTGGAGTCTaGGGATCGGTATCGTCCATC +
Preference number: 4 (lower is better)
Translates to: FFLIQPLWTKRGQAPVELPETGV*GSVSSI
Trigger: GATGGACGATACCGATCCTCAGACTCCAGTTTCTGG...GAGCTCCACTGGAGCCTGACCCCTCTTAGTCCACAGTGGCTGTATCAGAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555202.1
CDS-3UTR TCA 90 bp ATACATCAGTCATCTGGCAGCAGCTCGAGAAGCATGTCCTCCACGCCGTCAATCCCAGAAACTGGAGTCTaGGGATCGGTATCGTCCATC +
Preference number: 4 (lower is better)
Translates to: IHQSSGSSSRSMSSTPSIPETGV*GSVSSI
Trigger: GATGGACGATACCGATCCTCAGACTCCAGTTTCTGG...GATTGACGGCGTGGAGGACATGCTTCTCGAGCTGCTGCCAGATGACTGATGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555886.5
ENST00000556156.1
CDS-3UTR TCA 90 bp AAGAAAAGGACAGGGCATACTTTCAGGTTCCGCTTGCCAGGGCTTCTCCAGGCGGGTCCGAGTGTGAAATaGTGGTCATCACTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: KKRTGHTFRFRLPGLLQAGPSVK*WSSLFP
Trigger: AGGGAACAGTGATGACCATCATTTCACACTCGGACC...CGCCTGGAGAAGCCCTGGCAAGCGGAACCTGAAAGTATGCCCTGTCCTTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
CDS-3UTR GCA 90 bp GTGAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTGTGTAAAGGAGACAGGTGCTaGCAAGACCATACATCAGTC +
Preference number: 4 (lower is better)
Translates to: VRPLVQGFRGPAQVNRLCKGDRC*QDHTSV
Trigger: GACTGATGTATGGTCTTGGCAGCACCTGTCTCCTTT...ACACAGCCGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGTGGTCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000557043.4
CDS-3UTR GCA 90 bp TTCAGGCCTTTCCTTGAGCTGCACGTGAACCTGTGTGGGCAGGCAGCGTTTGCAGTGAAAGGAGACAGGTaGTGCCAAGACCATACATCA +
Preference number: 4 (lower is better)
Translates to: FRPFLELHVNLCGQAAFAVKGDR*CQDHTS
Trigger: TGATGTATGGTCTTGGCAGCACCTGTCTCCTTTCAC...TGCAAACGCTGCCTGCCCACACAGGTTCACGTGCAGCTCAAGGAAAGGCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000557043.4
CDS-3UTR GCA 90 bp CCCCAGCGTGGTGGAGAAGACACAGGCATAGTAAACGAAGGTGAACAGAAACACTCCTTAGGCCATGCATaGTCCTCTCAGGGACTCTGG +
Preference number: 4 (lower is better)
Translates to: PQRGGEDTGIVNEGEQKHSLGHA*SSQGLW
Trigger: CCAGAGTCCCTGAGAGGAGCATGCATGGCCTAAGGA...GTGTTTCTGTTCACCTTCGTTTACTATGCCTGTGTCTTCTCCACCACGCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000555886.5
CDS-3UTR CCA 90 bp CCAAATGGAATCCTCCTTGGCAGGAGTGGTAGTGCTAAGGCGAGCAGAGTGGGCTATCCTTTATCTCGATaGTTAAGGGCAGCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: PNGILLGRSGSAKASRVGYPLSR*LRAARR
Trigger: ACGCCTGGCTGCCCTTAACCATCGAGATAAAGGATA...GCCCACTCTGCTCGCCTTAGCACTACCACTCCTGCCAAGGAGGATTCCATTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000554012.5
CDS-3UTR CCA 90 bp AAGACCATACATCAGTCATCTGGCAGCAGCTCGAGAAGCATGTCCTCCACGCCGCTAAGCGCCAGAAACTaGAGTCTGAGGATCGGTATC +
Preference number: 4 (lower is better)
Translates to: KTIHQSSGSSSRSMSSTPLSARN*SLRIGI
Trigger: GATACCGATCCTCAGACTCCAGTTTCTGGCGCTTAG...CGGCGTGGAGGACATGCTTCTCGAGCTGCTGCCAGATGACTGATGTATGGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555886.5
ENST00000556156.1
CDS-3UTR CCA 90 bp ACCCAACCTCTATCCCTTTTCCACGTGGGCAAGCCAAGGGTTCTGAGGGCTCATAGAAGCTCTGCCAAATaGAATCCTCCTTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: TQPLSLFHVGKPRVLRAHRSSAK*NPPWQE
Trigger: CTCCTGCCAAGGAGGATTCCATTTGGCAGAGCTTCT...ATGAGCCCTCAGAACCCTTGGCTTGCCCACGTGGAAAAGGGATAGAGGTTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000554012.5
CDS-3UTR CCA 90 bp GCACCATGTGAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGTTCACGGAGCTGAGTaGGTGTGCAACATGAAATAC +
Preference number: 4 (lower is better)
Translates to: APCETTGPGFQRSCSGESVHGAE*VCNMKY
Trigger: GTATTTCATGTTGCACACCCACTCAGCTCCGTGAAC...CGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGTGGTCTCACATGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR TCA 90 bp ATAGGCCTCCCCAGGACGACGTCTTCCCGACGCAAGAGCACCCGTAACTGTAACCATAGTAAACGAAGGTaGACAGAAACACAACATCCC +
Preference number: 4 (lower is better)
Translates to: IGLPRTTSSRRKSTRNCNHSKRR*TETQHP
Trigger: GGGATGTTGTGTTTCTGTTCACCTTCGTTTACTATG...GTTACAGTTACGGGTGCTCTTGCGTCGGGAAGACGTCGTCCTGGGGAGGCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
CDS-3UTR GCA 90 bp CATTCCTCCCAGACCCCAGCGTGGTGGAGAAGACACAGGCATAGTAAACGAAGGAAAGGAGACAGGTGCTaGCAAGACCATACATCAGTC +
Preference number: 4 (lower is better)
Translates to: HSSQTPAWWRRHRHSKRRKGDRC*QDHTSV
Trigger: GACTGATGTATGGTCTTGGCAGCACCTGTCTCCTTT...CCTTCGTTTACTATGCCTGTGTCTTCTCCACCACGCTGGGGTCTGGGAGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000555886.5
ENST00000557043.4
CDS-3UTR GCA 90 bp GGAGACAGGTGCTGCCAAGACCATACATCAGTCATCTGGCAGCAGCTCGAGAAGGTGAAAGGAGACAGGTaGTGCCAAGACCATACATCA +
Preference number: 4 (lower is better)
Translates to: GDRCCQDHTSVIWQQLEKVKGDR*CQDHTS
Trigger: TGATGTATGGTCTTGGCAGCACCTGTCTCCTTTCAC...CTTCTCGAGCTGCTGCCAGATGACTGATGTATGGTCTTGGCAGCACCTGTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555886.5
ENST00000556156.1
CDS-3UTR GCA 90 bp CATTCCTCCCAGACCCCAGCGTGGTGGAGAAGACACAGGCATAGTAAACGAAGGGTGAAAGGAGACAGGTaGTGCCAAGACCATACATCA +
Preference number: 4 (lower is better)
Translates to: HSSQTPAWWRRHRHSKRRVKGDR*CQDHTS
Trigger: TGATGTATGGTCTTGGCAGCACCTGTCTCCTTTCAC...CCTTCGTTTACTATGCCTGTGTCTTCTCCACCACGCTGGGGTCTGGGAGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000555886.5
ENST00000557043.4
CDS-3UTR GCA 90 bp ATAAAGGGGGCTGCCTACAAAGCCCTTGGCTCCCGAAGTGGTAAGGGAGACATGATAGATATGAGCAGCTaGGATAAAGGGGGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: IKGAAYKALGSRSGKGDMIDMSS*DKGGCL
Trigger: TAGGCAGCCCCCTTTATCGCAGCTGCTCATATCTAT...CATGTCTCCCTTACCACTTCGGGAGCCAAGGGCTTTGTAGGCAGCCCCCTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555202.1
CDS-3UTR CCA 90 bp ACCCAACCTCTATCCCTTTTCCACGTGGGCAAGCCAAGGGTTCTGAGGGCTCATTATCCTTTATCTCGATaGTTAAGGGCAGCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: TQPLSLFHVGKPRVLRAHYPLSR*LRAARR
Trigger: ACGCCTGGCTGCCCTTAACCATCGAGATAAAGGATA...ATGAGCCCTCAGAACCCTTGGCTTGCCCACGTGGAAAAGGGATAGAGGTTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
CDS-3UTR CCA 90 bp TTCTTTCTGATACAGCCACTGTGGACTAAGAGGGGTCAGGCTCCAGTGGAGCTCCTAAGCGCCAGAAACTaGAGTCTGAGGATCGGTATC +
Preference number: 4 (lower is better)
Translates to: FFLIQPLWTKRGQAPVELLSARN*SLRIGI
Trigger: GATACCGATCCTCAGACTCCAGTTTCTGGCGCTTAG...GAGCTCCACTGGAGCCTGACCCCTCTTAGTCCACAGTGGCTGTATCAGAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555202.1
CDS-3UTR CCA 90 bp TGCCAAGACCATACATCAGTCATCTGGCAGCAGCTCGAGAAGCATGTCCTCCACCTAAGCGCCAGAAACTaGAGTCTGAGGATCGGTATC +
Preference number: 4 (lower is better)
Translates to: CQDHTSVIWQQLEKHVLHLSARN*SLRIGI
Trigger: GATACCGATCCTCAGACTCCAGTTTCTGGCGCTTAG...GTGGAGGACATGCTTCTCGAGCTGCTGCCAGATGACTGATGTATGGTCTTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555886.5
ENST00000556156.1
CDS-3UTR CCA 90 bp GCACCATGTGAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGCCGTCAATCTTGATGTaGTACACTAAGCGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: APCETTGPGFQRSCSGESPSILM*YTKRQK
Trigger: TTTCTGGCGCTTAGTGTACCACATCAAGATTGACGG...CGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGTGGTCTCACATGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR CCA 90 bp GAAGCTCTGCCAAATGGAATCCTCCTTGGCAGGAGTGGTAGTGCTAAGGCGAGCCATACATCAGTCATCTaGCAGCAGCTCGAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: EALPNGILLGRSGSAKASHTSVI*QQLEKH
Trigger: ATGCTTCTCGAGCTGCTGCCAGATGACTGATGTATG...GCTCGCCTTAGCACTACCACTCCTGCCAAGGAGGATTCCATTTGGCAGAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000557043.4
CDS-3UTR CCA 90 bp ACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTGTGTTCTCACAAAGAAGCTCTGCCAAATaGAATCCTCCTTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: TGPGFQRSCSGESAVFSQRSSAK*NPPWQE
Trigger: CTCCTGCCAAGGAGGATTCCATTTGGCAGAGCTTCT...TTGTGAGAACACAGCCGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR CCA 90 bp CTAAGCGCCAGAAACTGGAGTCTGAGGATCGGTATCGTCCATCAGGGTAGAGCTGTAATTCCAGTGCTTTaGAAGGCAGAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LSARNWSLRIGIVHQGRAVIPVL*KAEAGG
Trigger: TCCTCCTGCCTCTGCCTTCCAAAGCACTGGAATTAC...AGCTCTACCCTGATGGACGATACCGATCCTCAGACTCCAGTTTCTGGCGCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
CDS-3UTR CCA 90 bp ATGAGCAGCTGCGATAAAGGGGGCTGCCTACAAAGCCCTTGGCTCCCGAAGTGGTTCATGGAGAAGGGGTaGTCTTTCTTTCTGATACAG +
Preference number: 4 (lower is better)
Translates to: MSSCDKGGCLQSPWLPKWFMEKG*SFFLIQ
Trigger: CTGTATCAGAAAGAAAGACCACCCCTTCTCCATGAA...CCACTTCGGGAGCCAAGGGCTTTGTAGGCAGCCCCCTTTATCGCAGCTGCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555202.1
CDS-3UTR TCA 90 bp GTGAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTGTGTCATAGTAAACGAAGGTaGACAGAAACACAACATCCC +
Preference number: 4 (lower is better)
Translates to: VRPLVQGFRGPAQVNRLCHSKRR*TETQHP
Trigger: GGGATGTTGTGTTTCTGTTCACCTTCGTTTACTATG...ACACAGCCGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGTGGTCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR TCA 90 bp CATGTGAGACCACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTGCATAGTAAACGAAGGTaGACAGAAACACAACATCCC +
Preference number: 4 (lower is better)
Translates to: HVRPLVQGFRGPAQVNRLHSKRR*TETQHP
Trigger: GGGATGTTGTGTTTCTGTTCACCTTCGTTTACTATG...CAGCCGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGTGGTCTCACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR TCA 90 bp CAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTGTGTTCTCACAAGTTCACGGAAATACTAGTGCTGTaGGGGACAGAAGGGACAGAA +
Preference number: 4 (lower is better)
Translates to: QGFRGPAQVNRLCSHKFTEILVL*GTEGTE
Trigger: TTCTGTCCCTTCTGTCCCTCACAGCACTAGTATTTC...CGTGAACTTGTGAGAACACAGCCGATTCACCTGAGCAGGACCTCTGAAACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR TCA 90 bp TGGAAGAAGCTCTGCCAAATGGAATCCTCCTTGGCAGGAGTGGTAGTGCTAAGGACAAGTTCACGGAGCTaGGTGGGTGTGCAACATGAA +
Preference number: 4 (lower is better)
Translates to: WKKLCQMESSLAGVVVLRTSSRS*VGVQHE
Trigger: TTCATGTTGCACACCCACTCAGCTCCGTGAACTTGT...CCTTAGCACTACCACTCCTGCCAAGGAGGATTCCATTTGGCAGAGCTTCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR TCA 90 bp AGAAGGGACAGAAAGAGGCTGAAGACCATCATCCAGCTGAGAAAAGCCGAGGCAACAAGTTCACGGAGCTaGGTGGGTGTGCAACATGAA +
Preference number: 4 (lower is better)
Translates to: RRDRKRLKTIIQLRKAEATSSRS*VGVQHE
Trigger: TTCATGTTGCACACCCACTCAGCTCCGTGAACTTGT...TGCCTCGGCTTTTCTCAGCTGGATGATGGTCTTCAGCCTCTTTCTGTCCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR GCA 90 bp ACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTGTGTTCTCACAAAAAGGAGACAGGTGCTaGCAAGACCATACATCAGTC +
Preference number: 4 (lower is better)
Translates to: TGPGFQRSCSGESAVFSQKGDRC*QDHTSV
Trigger: GACTGATGTATGGTCTTGGCAGCACCTGTCTCCTTT...TTGTGAGAACACAGCCGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000557043.4
CDS-3UTR GCA 90 bp CCAAATGGAATCCTCCTTGGCAGGAGTGGTAGTGCTAAGGCGAGCAGAGTGGGCTTTGTAACACCCAGGTaGGTGACCATCTATAAAAGG +
Preference number: 4 (lower is better)
Translates to: PNGILLGRSGSAKASRVGFVTPR*VTIYKR
Trigger: CCTTTTATAGATGGTCACGCACCTGGGTGTTACAAA...GCCCACTCTGCTCGCCTTAGCACTACCACTCCTGCCAAGGAGGATTCCATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000554012.5
CDS-3UTR GCA 90 bp CTAAGCGCCAGAAACTGGAGTCTGAGGATCGGTATCGTCCATCAGGGTAGAGCTTATTTCCTTAGGCCATaGATGCTCCTCTCAGGGACT +
Preference number: 4 (lower is better)
Translates to: LSARNWSLRIGIVHQGRAYFLRP*MLLSGT
Trigger: AGTCCCTGAGAGGAGCATGCATGGCCTAAGGAAATA...AGCTCTACCCTGATGGACGATACCGATCCTCAGACTCCAGTTTCTGGCGCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555886.5
CDS-3UTR CCA 90 bp CTTGTGAAGTACTTTATAGATATGAGCAGCTGCGATAAAGGGGGCTGCCTACAAAGGCTTGGGCCTATCTaGGTGGGGGTCATAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LVKYFIDMSSCDKGGCLQRLGPI*VGVIGL
Trigger: GAGGCCTATGACCCCCACCCAGATAGGCCCAAGCCT...TTGTAGGCAGCCCCCTTTATCGCAGCTGCTCATATCTATAAAGTACTTCACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555202.1
CDS-3UTR CCA 90 bp ACCCAACCTCTATCCCTTTTCCACGTGGGCAAGCCAAGGGTTCTGAGGGCTCATCCGTCAATCTTGATGTaGTACACTAAGCGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: TQPLSLFHVGKPRVLRAHPSILM*YTKRQK
Trigger: TTTCTGGCGCTTAGTGTACCACATCAAGATTGACGG...ATGAGCCCTCAGAACCCTTGGCTTGCCCACGTGGAAAAGGGATAGAGGTTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
CDS-3UTR CCA 90 bp CCAAGACCATACATCAGTCATCTGGCAGCAGCTCGAGAAGCATGTCCTCCACGCCCGTCAATCTTGATGTaGTACACTAAGCGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: PRPYISHLAAAREACPPRPSILM*YTKRQK
Trigger: TTTCTGGCGCTTAGTGTACCACATCAAGATTGACGG...GCGTGGAGGACATGCTTCTCGAGCTGCTGCCAGATGACTGATGTATGGTCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555886.5
ENST00000556156.1
CDS-3UTR CCA 90 bp CCTGGGGTGAAAGGAGACAGGTGCTGCCAAGACCATACATCAGTCATCTGGCAGCCGTCAATCTTGATGTaGTACACTAAGCGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: PGVKGDRCCQDHTSVIWQPSILM*YTKRQK
Trigger: TTTCTGGCGCTTAGTGTACCACATCAAGATTGACGG...CTGCCAGATGACTGATGTATGGTCTTGGCAGCACCTGTCTCCTTTCACCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555886.5
ENST00000556156.1
CDS-3UTR CCA 90 bp CACTTCTCTCCACCAGAATCTAAGTCAAGGATAGAAGCTGATTCCGCACGAAGTTCCCAGACCCCAGCGTaGTGGAGAAGACACAGGCAT +
Preference number: 4 (lower is better)
Translates to: HFSPPESKSRIEADSARSSQTPA*WRRHRH
Trigger: ATGCCTGTGTCTTCTCCACCACGCTGGGGTCTGGGA...ACTTCGTGCGGAATCAGCTTCTATCCTTGACTTAGATTCTGGTGGAGAGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000554012.5
CDS-3UTR CCA 90 bp CGACGCAAGAGCACCCGTAACTGTAACCTATCCTTTATTTCCTTAGGCCATGCAGACCCTGTATCTCGATaGTTAAGGGCAGCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: RRKSTRNCNLSFISLGHADPVSR*LRAARR
Trigger: ACGCCTGGCTGCCCTTAACCATCGAGATACAGGGTC...TGCATGGCCTAAGGAAATAAAGGATAGGTTACAGTTACGGGTGCTCTTGCGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555886.5
CDS-3UTR CCA 90 bp TTCTTTCTGATACAGCCACTGTGGACTAAGAGGGGTCAGGCTCCAGTGGAGCTCTTAGCACTGCCTTCATaGAGAAGGGGTGGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: FFLIQPLWTKRGQAPVELLALPS*RRGGLS
Trigger: AGAAAGACCACCCCTTCTCCATGAAGGCAGTGCTAA...GAGCTCCACTGGAGCCTGACCCCTCTTAGTCCACAGTGGCTGTATCAGAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555202.1
CDS-3UTR TCA 90 bp GAAGGTGAACAGAAACACAACATCCCCATTGTAGGCTGGCCAGGCTCAGGCCCTCATAGTAAACGAAGGTaGACAGAAACACAACATCCC +
Preference number: 4 (lower is better)
Translates to: EGEQKHNIPIVGWPGSGPHSKRR*TETQHP
Trigger: GGGATGTTGTGTTTCTGTTCACCTTCGTTTACTATG...AGGGCCTGAGCCTGGCCAGCCTACAATGGGGATGTTGTGTTTCTGTTCACCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
ENST00000557043.4
CDS-3UTR TCA 90 bp GACAGAAGGGACAGAAAGAGGCTGAAGACCATCATCCAGCTGAGAAAAGCCGAGGAAATACTAGTGCTGTaGGGGACAGAAGGGACAGAA +
Preference number: 4 (lower is better)
Translates to: DRRDRKRLKTIIQLRKAEEILVL*GTEGTE
Trigger: TTCTGTCCCTTCTGTCCCTCACAGCACTAGTATTTC...CTCGGCTTTTCTCAGCTGGATGATGGTCTTCAGCCTCTTTCTGTCCCTTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR TCA 90 bp TCGGCTGTGTTCTCACAAGTTCACGGAGCTGAGTGGGTGTGCAACATGAAATACACAAGTTCACGGAGCTaGGTGGGTGTGCAACATGAA +
Preference number: 4 (lower is better)
Translates to: SAVFSQVHGAEWVCNMKYTSSRS*VGVQHE
Trigger: TTCATGTTGCACACCCACTCAGCTCCGTGAACTTGT...GTATTTCATGTTGCACACCCACTCAGCTCCGTGAACTTGTGAGAACACAGCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR TCA 90 bp CAGAAGGGACAGAAAGAGGCTGAAGACCATCATCCAGCTGAGAAAAGCCGAGGCGTCAAGGATAGAAGCTaGTTCCGCACGAAGTTAGAT +
Preference number: 4 (lower is better)
Translates to: QKGQKEAEDHHPAEKSRGVKDRS*FRTKLD
Trigger: ATCTAACTTCGTGCGGAATCAGCTTCTATCCTTGAC...GCCTCGGCTTTTCTCAGCTGGATGATGGTCTTCAGCCTCTTTCTGTCCCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000554012.5
CDS-3UTR TCA 90 bp ACTGGTCCAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTGTGTTCTCACAAGTCAAGGATAGAAGCTaGTTCCGCACGAAGTTAGAT +
Preference number: 4 (lower is better)
Translates to: TGPGFQRSCSGESAVFSQVKDRS*FRTKLD
Trigger: ATCTAACTTCGTGCGGAATCAGCTTCTATCCTTGAC...TTGTGAGAACACAGCCGATTCACCTGAGCAGGACCTCTGAAACCCTGGACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000554012.5
CDS-3UTR TCA 90 bp ATGAGCAGCTGCGATAAAGGGGGCTGCCTACAAAGCCCTTGGCTCCCGAAGTGGAAAAGCAATGGTAAATaGAAGTGCCAGCTGAAACTT +
Preference number: 4 (lower is better)
Translates to: MSSCDKGGCLQSPWLPKWKSNGK*KCQLKL
Trigger: AAGTTTCAGCTGGCACTTTCATTTACCATTGCTTTT...CCACTTCGGGAGCCAAGGGCTTTGTAGGCAGCCCCCTTTATCGCAGCTGCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555202.1
CDS-3UTR GCA 90 bp TCCTCCACGCCGTCAATCTTGATGTGGTACACTAAGCGCCAGAAACTGGAGTCTAAAGGAGACAGGTGCTaGCAAGACCATACATCAGTC +
Preference number: 4 (lower is better)
Translates to: SSTPSILMWYTKRQKLESKGDRC*QDHTSV
Trigger: GACTGATGTATGGTCTTGGCAGCACCTGTCTCCTTT...AGACTCCAGTTTCTGGCGCTTAGTGTACCACATCAAGATTGACGGCGTGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555886.5
ENST00000556156.1
CDS-3UTR GCA 90 bp CAGGCGTGTTTACATGCAGGCGTAGCACCATGTGAGACCACTGGTCCAGGGTTTTTTGTAACACCCAGGTaGGTGACCATCTATAAAAGG +
Preference number: 4 (lower is better)
Translates to: QACLHAGVAPCETTGPGFFVTPR*VTIYKR
Trigger: CCTTTTATAGATGGTCACGCACCTGGGTGTTACAAA...AAACCCTGGACCAGTGGTCTCACATGGTGCTACGCCTGCATGTAAACACGCCTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
CDS-3UTR GCA 90 bp ACCCAACCTCTATCCCTTTTCCACGTGGGCAAGCCAAGGGTTCTGAGGGCTCATTTTTTATTTGGGGGCTaGCTATTCTCACTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: TQPLSLFHVGKPRVLRAHFLFGG*LFSLLS
Trigger: GGAGAGAAGTGAGAATAGGCAGCCCCCAAATAAAAA...ATGAGCCCTCAGAACCCTTGGCTTGCCCACGTGGAAAAGGGATAGAGGTTGGGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000554012.5
CDS-3UTR CCA 90 bp TTCTTTCTGATACAGCCACTGTGGACTAAGAGGGGTCAGGCTCCAGTGGAGCTCCCGTCAATCTTGATGTaGTACACTAAGCGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: FFLIQPLWTKRGQAPVELPSILM*YTKRQK
Trigger: TTTCTGGCGCTTAGTGTACCACATCAAGATTGACGG...GAGCTCCACTGGAGCCTGACCCCTCTTAGTCCACAGTGGCTGTATCAGAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555202.1
CDS-3UTR TCA 90 bp CAGGGTTTCAGAGGTCCTGCTCAGGTGAATCGGCTGTGTTCTCACAAGTTCACGAGTGGGTGTGCAACATaGAATACTAGTGATCAGTCA +
Preference number: 4 (lower is better)
Translates to: QGFRGPAQVNRLCSHKFTSGCAT*NTSDQS
Trigger: TGACTGATCACTAGTATTTCATGTTGCACACCCACT...CGTGAACTTGTGAGAACACAGCCGATTCACCTGAGCAGGACCTCTGAAACCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556450.5
CDS-3UTR GCA 90 bp AACGAAGGTGAACAGAAACACAACATCCCCATTGTAGGCTGGCCAGGCTCAGGCTTTGTAACACCCAGGTaGGTGACCATCTATAAAAGG +
Preference number: 4 (lower is better)
Translates to: NEGEQKHNIPIVGWPGSGFVTPR*VTIYKR
Trigger: CCTTTTATAGATGGTCACGCACCTGGGTGTTACAAA...GCCTGAGCCTGGCCAGCCTACAATGGGGATGTTGTGTTTCTGTTCACCTTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000554012.5
CDS-3UTR CCA 90 bp GACAGAAGGGACAGAAAGAGGCTGAAGACCATCATCCAGCTGAGAAAAGCCGAGCCGTCAATCTTGATGTaGTACACTAAGCGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: DRRDRKRLKTIIQLRKAEPSILM*YTKRQK
Trigger: TTTCTGGCGCTTAGTGTACCACATCAAGATTGACGG...CTCGGCTTTTCTCAGCTGGATGATGGTCTTCAGCCTCTTTCTGTCCCTTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR TCA 90 bp GCCTATTCTCACTTCTCTCCACCAGAATCTAAGTCAAGGATAGAAGCTGATTCCCCAGAAACTGGAGTCTaGGGATCGGTATCGTCCATC +
Preference number: 4 (lower is better)
Translates to: AYSHFSPPESKSRIEADSPETGV*GSVSSI
Trigger: GATGGACGATACCGATCCTCAGACTCCAGTTTCTGG...GGAATCAGCTTCTATCCTTGACTTAGATTCTGGTGGAGAGAAGTGAGAATAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000554012.5
CDS-3UTR CCA 90 bp TGTAACCTATCCTTTATTTCCTTAGGCCATGCATGCTCCTCTCAGGGACTCTGGCATACATCAGTCATCTaGCAGCAGCTCGAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: CNLSFISLGHACSSQGLWHTSVI*QQLEKH
Trigger: ATGCTTCTCGAGCTGCTGCCAGATGACTGATGTATG...CCAGAGTCCCTGAGAGGAGCATGCATGGCCTAAGGAAATAAAGGATAGGTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555886.5
CDS-3UTR CCA 90 bp CACTTCTCTCCACCAGAATCTAAGTCAAGGATAGAAGCTGATTCCGCACGAAGTAGAAGCTCTGCCAAATaGAATCCTCCTTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: HFSPPESKSRIEADSARSRSSAK*NPPWQE
Trigger: CTCCTGCCAAGGAGGATTCCATTTGGCAGAGCTTCT...ACTTCGTGCGGAATCAGCTTCTATCCTTGACTTAGATTCTGGTGGAGAGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402399.6
ENST00000554012.5
CDS-3UTR CCA 90 bp CTTGTGAAGTACTTTATAGATATGAGCAGCTGCGATAAAGGGGGCTGCCTACAACTGATACAGCCACTGTaGACTAAGAGGGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: LVKYFIDMSSCDKGGCLQLIQPL*TKRGQA
Trigger: AGCCTGACCCCTCTTAGTCCACAGTGGCTGTATCAG...TTGTAGGCAGCCCCCTTTATCGCAGCTGCTCATATCTATAAAGTACTTCACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555202.1
CDS-3UTR TCA 90 bp CCCGACGCAAGAGCACCCGTAACTGTAACCTATCCTTTATCTGAGGAGAAGAAAAACCTATCCTTTATCTaGGGAGAAGAAAAGGACAGG +
Preference number: 4 (lower is better)
Translates to: PDARAPVTVTYPLSEEKKNLSFI*GEEKDR
Trigger: CCTGTCCTTTTCTTCTCCTCAGATAAAGGATAGGTT...TTTCTTCTCCTCAGATAAAGGATAGGTTACAGTTACGGGTGCTCTTGCGTCGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
CDS-3UTR GCA 90 bp GCCTATTCTCACTTCTCTCCACCAGAATCTAAGTCAAGGATAGAAGCTGATTCCAAAGGAGACAGGTGCTaGCAAGACATCAGTCATCTG +
Preference number: 4 (lower is better)
Translates to: AYSHFSPPESKSRIEADSKGDRC*QDISHL
Trigger: CAGATGACTGATGTCTTGGCAGCACCTGTCTCCTTT...GGAATCAGCTTCTATCCTTGACTTAGATTCTGGTGGAGAGAAGTGAGAATAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554012.5
CDS-3UTR CCA 90 bp CTTGTGAAGTACTTTATAGATATGAGCAGCTGCGATAAAGGGGGCTGCCTACAACATACATCAGTCATCTaGCAGCAGCTCGAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: LVKYFIDMSSCDKGGCLQHTSVI*QQLEKH
Trigger: ATGCTTCTCGAGCTGCTGCCAGATGACTGATGTATG...TTGTAGGCAGCCCCCTTTATCGCAGCTGCTCATATCTATAAAGTACTTCACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555202.1
CDS GCA 90 bp CACGAACTTCTCCCAGGCCCACAGGCGGTCCGGGTGGTCGGTGACTaGCTCCCCGAGTGTCGGGCACTCGGCCATGGCGTCCTCGGGCCG +
Preference number: 5 (lower is better)
Translates to: HELLPGPQAVRVVGD*LPECRALGHGVLGP
Trigger: CGGCCCGAGGACGCCATGGCCGAGTGCCCGACACTCGGGGAGGCAGTCACCGACCACCCGGACCGCCTGTGGGCCTGGGAGAAGTTCGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000555202.1
ENST00000555886.5
ENST00000556156.1
ENST00000556450.5
CDS TCA 90 bp AATACACGAACTTCTCCCAGGCCCACAGGCGGTCCGGGTGGTCGGTaGCTGCCTCCCCGAGTGTCGGGCACTCGGCCATGGCGTCCTCGG +
Preference number: 5 (lower is better)
Translates to: NTRTSPRPTGGPGGR*LPPRVSGTRPWRPR
Trigger: CCGAGGACGCCATGGCCGAGTGCCCGACACTCGGGGAGGCAGTCACCGACCACCCGGACCGCCTGTGGGCCTGGGAGAAGTTCGTGTATT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000555202.1
ENST00000555886.5
ENST00000556156.1
ENST00000556450.5
CDS CCA 90 bp TCGTCCAAATACACGAACTTCTCCCAGGCCCACAGGCGGTCCGGGTaGTCGGTGACTGCCTCCCCGAGTGTCGGGCACTCGGCCATGGCG +
Preference number: 5 (lower is better)
Translates to: SSKYTNFSQAHRRSG*SVTASPSVGHSAMA
Trigger: CGCCATGGCCGAGTGCCCGACACTCGGGGAGGCAGTCACCGACCACCCGGACCGCCTGTGGGCCTGGGAGAAGTTCGTGTATTTGGACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000555202.1
ENST00000555886.5
ENST00000556156.1
ENST00000556450.5
CDS CCA 90 bp GCAAGAGCCAGAGCCTCTCAAGGCCGCTCGCTGGTCCCTGGGATGTaGGGCCGACCCTTTATATCCGGGCAGCATGCGGCCGCCACCAAG +
Preference number: 5 (lower is better)
Translates to: ARARASQGRSLVPGM*GRPFISGQHAAATK
Trigger: CTTGGTGGCGGCCGCATGCTGCCCGGATATAAAGGGTCGGCCCCACATCCCAGGGACCAGCGAGCGGCCTTGAGAGGCTCTGGCTCTTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554012.5
CDS CCA 90 bp CTAAGAAGCAAGAGCCAGAGCCTCTCAAGGCCGCTCGCTGGTCCCTaGGATGTGGGGCCGACCCTTTATATCCGGGCAGCATGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: LRSKSQSLSRPLAGP*DVGPTLYIRAACGR
Trigger: GCGGCCGCATGCTGCCCGGATATAAAGGGTCGGCCCCACATCCCAGGGACCAGCGAGCGGCCTTGAGAGGCTCTGGCTCTTGCTTCTTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554012.5
CDS CCA 90 bp GGGCCGCCTAAGAAGCAAGAGCCAGAGCCTCTCAAGGCCGCTCGCTaGTCCCTGGGATGTGGGGCCGACCCTTTATATCCGGGCAGCATG +
Preference number: 5 (lower is better)
Translates to: GPPKKQEPEPLKAAR*SLGCGADPLYPGSM
Trigger: CATGCTGCCCGGATATAAAGGGTCGGCCCCACATCCCAGGGACCAGCGAGCGGCCTTGAGAGGCTCTGGCTCTTGCTTCTTAGGCGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554012.5
CDS-3UTR CAA 90 bp CCACGTGGGCAAGCCAAGGGTTCTGAGGGCTCATCCACAGGGCTCGCCGGCCTGTCCACGCCGTCAATCTaGATGTGGTACACTAAGCGC +
Preference number: 5 (lower is better)
Translates to: PRGQAKGSEGSSTGLAGLSTPSI*MWYTKR
Trigger: GCGCTTAGTGTACCACATCAAGATTGACGGCGTGGA...CAGGCCGGCGAGCCCTGTGGATGAGCCCTCAGAACCCTTGGCTTGCCCACGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000556450.5
ENST00000557043.4
CDS-3UTR CAA 90 bp TATCTGGGTGGGGGTCATAGGCCTCCCCAGGACGACGTCTTCCCGACGCAAGAGACTTTCAGGTTCCGCTaGCCAGGGCTTCTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: YLGGGHRPPQDDVFPTQETFRFR*PGLLQA
Trigger: CGCCTGGAGAAGCCCTGGCAAGCGGAACCTGAAAGT...CTCTTGCGTCGGGAAGACGTCGTCCTGGGGAGGCCTATGACCCCCACCCAGATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554119.5
ENST00000556156.1
CDS GCA 90 bp AGAGCGAGACCCTGTATCTCGATGGTTAAGGGCAGCCAGGCGTGCTaGTTCTCGTCCAAATACACGAACTTCTCCCAGGCCCACAGGCGG +
Preference number: 5 (lower is better)
Translates to: RARPCISMVKGSQAC*FSSKYTNFSQAHRR
Trigger: CCGCCTGTGGGCCTGGGAGAAGTTCGTGTATTTGGACGAGAAGCAGCACGCCTGGCTGCCCTTAACCATCGAGATACAGGGTCTCGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
CDS GCA 90 bp CACAGAGCGAGACCCTGTATCTCGATGGTTAAGGGCAGCCAGGCGTaGTGCTTCTCGTCCAAATACACGAACTTCTCCCAGGCCCACAGG +
Preference number: 5 (lower is better)
Translates to: HRARPCISMVKGSQA*CFSSKYTNFSQAHR
Trigger: CCTGTGGGCCTGGGAGAAGTTCGTGTATTTGGACGAGAAGCAGCACGCCTGGCTGCCCTTAACCATCGAGATACAGGGTCTCGCTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
CDS-3UTR CAA 90 bp GCTGCCAAGACCATACATCAGTCATCTGGCAGCAGCTCGAGAAGCATGTCCTCCACTTTCAGGTTCCGCTaGCCAGGGCTTCTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: AAKTIHQSSGSSSRSMSSTFRFR*PGLLQA
Trigger: CGCCTGGAGAAGCCCTGGCAAGCGGAACCTGAAAGT...GGAGGACATGCTTCTCGAGCTGCTGCCAGATGACTGATGTATGGTCTTGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556156.1
CDS-3UTR CAA 90 bp AGGCCTTTCCTTGAGCTGCACGTGAACCTGTGTGGGCAGGCAGCGTTTGCAGGCCAAATGGAATCCTCCTaGGCAGGAGTGGTAGTGCTA +
Preference number: 5 (lower is better)
Translates to: RPFLELHVNLCGQAAFAGQMESS*AGVVVL
Trigger: TAGCACTACCACTCCTGCCAAGGAGGATTCCATTTG...GCCTGCAAACGCTGCCTGCCCACACAGGTTCACGTGCAGCTCAAGGAAAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR CAA 90 bp AGGTCCTGCAGGCCCTGGGTAGAGCTCATCCTCTGTCTGTCCATTCCTCCCAGACAAATGGAATCCTCCTaGGCAGGAGTGGTAGTGCTA +
Preference number: 5 (lower is better)
Translates to: RSCRPWVELILCLSIPPRQMESS*AGVVVL
Trigger: TAGCACTACCACTCCTGCCAAGGAGGATTCCATTTG...TCTGGGAGGAATGGACAGACAGAGGATGAGCTCTACCCAGGGCCTGCAGGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000557043.4
CDS-3UTR CAA 90 bp AAGAAAAGGACAGGGCATACTTTCAGGTTCCGCTTGCCAGGGCTTCTCCAGGCGGGTGCTGCCAAGACCTaGATGTGGTACACTAAGCGC +
Preference number: 5 (lower is better)
Translates to: KKRTGHTFRFRLPGLLQAGAAKT*MWYTKR
Trigger: GCGCTTAGTGTACCACATCAAGGTCTTGGCAGCACC...CGCCTGGAGAAGCCCTGGCAAGCGGAACCTGAAAGTATGCCCTGTCCTTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554119.5
CDS GCA 90 bp TGTAACCTATCCTTTATCTCGATGGTTAAGGGCAGCCAGGCGTGCTaGTTCTCGTCCAAATACACGAACTTCTCCCAGGCCCACAGGCGG +
Preference number: 5 (lower is better)
Translates to: CNLSFISMVKGSQAC*FSSKYTNFSQAHRR
Trigger: CCGCCTGTGGGCCTGGGAGAAGTTCGTGTATTTGGACGAGAAGCAGCACGCCTGGCTGCCCTTAACCATCGAGATAAAGGATAGGTTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000555202.1
ENST00000556450.5
CDS-3UTR CAA 90 bp GAAGGTGAACAGAAACACAACATCCCCATTGTAGGCTGGCCAGGCTCAGGCCCTTCCACGCCGTCAATCTaGATGTGGTACACTAAGCGC +
Preference number: 5 (lower is better)
Translates to: EGEQKHNIPIVGWPGSGPSTPSI*MWYTKR
Trigger: GCGCTTAGTGTACCACATCAAGATTGACGGCGTGGA...AGGGCCTGAGCCTGGCCAGCCTACAATGGGGATGTTGTGTTTCTGTTCACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000555886.5
ENST00000556156.1
ENST00000557043.4
CDS CCA 90 bp GCCTTCATGGAGAAGGGGTGGTCTTTCTTTCTGATACAGCCACTGTaGACTAAGAGGGGTCAGGCTCCAGTGGAGCTCACCATACATCAG +
Preference number: 5 (lower is better)
Translates to: AFMEKGWSFFLIQPL*TKRGQAPVELTIHQ
Trigger: CTGATGTATGGTGAGCTCCACTGGAGCCTGACCCCTCTTAGTCCACAGTGGCTGTATCAGAAAGAAAGACCACCCCTTCTCCATGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555202.1
CDS-3UTR CAA 90 bp CTATCCTTTATTTCCTTAGGCCATGCATGCTCCTCTCAGGGACTCTGGCTGGGCTCCACGCCGTCAATCTaGATGTGGTACACTAAGCGC +
Preference number: 5 (lower is better)
Translates to: LSFISLGHACSSQGLWLGSTPSI*MWYTKR
Trigger: GCGCTTAGTGTACCACATCAAGATTGACGGCGTGGA...GCCCAGCCAGAGTCCCTGAGAGGAGCATGCATGGCCTAAGGAAATAAAGGATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555886.5
CDS-3UTR CAA 90 bp ATACATCAGTCATCTGGCAGCAGCTCGAGAAGCATGTCCTCCACGCCGTCAATCTCCACGCCGTCAATCTaGATGTGGTACACTAAGCGC +
Preference number: 5 (lower is better)
Translates to: IHQSSGSSSRSMSSTPSISTPSI*MWYTKR
Trigger: GCGCTTAGTGTACCACATCAAGATTGACGGCGTGGA...GATTGACGGCGTGGAGGACATGCTTCTCGAGCTGCTGCCAGATGACTGATGTAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555886.5
ENST00000556156.1
CDS GCA 90 bp AACTGTAACCTATCCTTTATCTCGATGGTTAAGGGCAGCCAGGCGTaGTGCTTCTCGTCCAAATACACGAACTTCTCCCAGGCCCACAGG +
Preference number: 5 (lower is better)
Translates to: NCNLSFISMVKGSQA*CFSSKYTNFSQAHR
Trigger: CCTGTGGGCCTGGGAGAAGTTCGTGTATTTGGACGAGAAGCAGCACGCCTGGCTGCCCTTAACCATCGAGATAAAGGATAGGTTACAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000555202.1
ENST00000556450.5
CDS-3UTR CAA 90 bp CTTGTGAAGTACTTTATAGATATGAGCAGCTGCGATAAAGGGGGCTGCCTACAACTGCCTACAAAGCCCTaGGCTCCCGAAGTGGTAAGG +
Preference number: 5 (lower is better)
Translates to: LVKYFIDMSSCDKGGCLQLPTKP*APEVVR
Trigger: CCTTACCACTTCGGGAGCCAAGGGCTTTGTAGGCAG...TTGTAGGCAGCCCCCTTTATCGCAGCTGCTCATATCTATAAAGTACTTCACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555202.1
CDS-3UTR CAA 90 bp CTTGTGAAGTACTTTATAGATATGAGCAGCTGCGATAAAGGGGGCTGCCTACAATCCACGCCGTCAATCTaGATGTGGTACACTAAGCGC +
Preference number: 5 (lower is better)
Translates to: LVKYFIDMSSCDKGGCLQSTPSI*MWYTKR
Trigger: GCGCTTAGTGTACCACATCAAGATTGACGGCGTGGA...TTGTAGGCAGCCCCCTTTATCGCAGCTGCTCATATCTATAAAGTACTTCACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555202.1
CDS GCA 72 bp CTCCCAGGCCCACAGGCGGTCCGGGTGGTCGGTGACTaGCTCCCCGAGTGTCGGGCACTCGGCCATGGCGTC +
Preference number: 6 (lower is better)
Translates to: LPGPQAVRVVGD*LPECRALGHGV
Trigger: GACGCCATGGCCGAGTGCCCGACACTCGGGGAGGCAGTCACCGACCACCCGGACCGCCTGTGGGCCTGGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000555202.1
ENST00000555886.5
ENST00000556156.1
ENST00000556450.5
CDS TCA 72 bp ACTTCTCCCAGGCCCACAGGCGGTCCGGGTGGTCGGTaGCTGCCTCCCCGAGTGTCGGGCACTCGGCCATGG +
Preference number: 6 (lower is better)
Translates to: TSPRPTGGPGGR*LPPRVSGTRPW
Trigger: CCATGGCCGAGTGCCCGACACTCGGGGAGGCAGTCACCGACCACCCGGACCGCCTGTGGGCCTGGGAGAAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000555202.1
ENST00000555886.5
ENST00000556156.1
ENST00000556450.5
CDS CCA 72 bp TACACGAACTTCTCCCAGGCCCACAGGCGGTCCGGGTaGTCGGTGACTGCCTCCCCGAGTGTCGGGCACTCG +
Preference number: 6 (lower is better)
Translates to: YTNFSQAHRRSG*SVTASPSVGHS
Trigger: CGAGTGCCCGACACTCGGGGAGGCAGTCACCGACCACCCGGACCGCCTGTGGGCCTGGGAGAAGTTCGTGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000554119.5
ENST00000555202.1
ENST00000555886.5
ENST00000556156.1
ENST00000556450.5
CDS CCA 72 bp AGAGCCTCTCAAGGCCGCTCGCTGGTCCCTGGGATGTaGGGCCGACCCTTTATATCCGGGCAGCATGCGGCC +
Preference number: 6 (lower is better)
Translates to: RASQGRSLVPGM*GRPFISGQHAA
Trigger: GGCCGCATGCTGCCCGGATATAAAGGGTCGGCCCCACATCCCAGGGACCAGCGAGCGGCCTTGAGAGGCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554012.5
CDS CCA 72 bp AAGAGCCAGAGCCTCTCAAGGCCGCTCGCTGGTCCCTaGGATGTGGGGCCGACCCTTTATATCCGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: KSQSLSRPLAGP*DVGPTLYIRAA
Trigger: TGCTGCCCGGATATAAAGGGTCGGCCCCACATCCCAGGGACCAGCGAGCGGCCTTGAGAGGCTCTGGCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554012.5
CDS CCA 72 bp AAGAAGCAAGAGCCAGAGCCTCTCAAGGCCGCTCGCTaGTCCCTGGGATGTGGGGCCGACCCTTTATATCCG +
Preference number: 6 (lower is better)
Translates to: KKQEPEPLKAAR*SLGCGADPLYP
Trigger: CGGATATAAAGGGTCGGCCCCACATCCCAGGGACCAGCGAGCGGCCTTGAGAGGCTCTGGCTCTTGCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554012.5
CDS CCA 72 bp TCAGGCTCCAGTGGAGCTCACCATACATCAGTCATCTaGCAGCAGCTCGAGAAGCATGTCCTCCACGCCGTC +
Preference number: 6 (lower is better)
Translates to: SGSSGAHHTSVI*QQLEKHVLHAV
Trigger: GACGGCGTGGAGGACATGCTTCTCGAGCTGCTGCCAGATGACTGATGTATGGTGAGCTCCACTGGAGCCTGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555202.1
CDS GCA 72 bp CCCTGTATCTCGATGGTTAAGGGCAGCCAGGCGTGCTaGTTCTCGTCCAAATACACGAACTTCTCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: PCISMVKGSQAC*FSSKYTNFSQA
Trigger: GGCCTGGGAGAAGTTCGTGTATTTGGACGAGAAGCAGCACGCCTGGCTGCCCTTAACCATCGAGATACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
CDS GCA 72 bp TCCTTTATCTCGATGGTTAAGGGCAGCCAGGCGTGCTaGTTCTCGTCCAAATACACGAACTTCTCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: SFISMVKGSQAC*FSSKYTNFSQA
Trigger: GGCCTGGGAGAAGTTCGTGTATTTGGACGAGAAGCAGCACGCCTGGCTGCCCTTAACCATCGAGATAAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000555202.1
ENST00000556450.5
CDS GCA 72 bp AGACCCTGTATCTCGATGGTTAAGGGCAGCCAGGCGTaGTGCTTCTCGTCCAAATACACGAACTTCTCCCAG +
Preference number: 6 (lower is better)
Translates to: RPCISMVKGSQA*CFSSKYTNFSQ
Trigger: CTGGGAGAAGTTCGTGTATTTGGACGAGAAGCAGCACGCCTGGCTGCCCTTAACCATCGAGATACAGGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554119.5
ENST00000555886.5
ENST00000556156.1
CDS GCA 72 bp CTATCCTTTATCTCGATGGTTAAGGGCAGCCAGGCGTaGTGCTTCTCGTCCAAATACACGAACTTCTCCCAG +
Preference number: 6 (lower is better)
Translates to: LSFISMVKGSQA*CFSSKYTNFSQ
Trigger: CTGGGAGAAGTTCGTGTATTTGGACGAGAAGCAGCACGCCTGGCTGCCCTTAACCATCGAGATAAAGGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402399.6
ENST00000554012.5
ENST00000555202.1
ENST00000556450.5
CDS TCA 72 bp TCTCACAAGTTCACGGAGCTGAGTGGGTGTGCAACATaGAATACTAGTGATCAGTCATCTGGCAGCAGCTCG +
Preference number: 6 (lower is better)
Translates to: SHKFTELSGCAT*NTSDQSSGSSS
Trigger: CGAGCTGCTGCCAGATGACTGATCACTAGTATTTCATGTTGCACACCCACTCAGCTCCGTGAACTTGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556450.5