Pregenerated sensors for TCIM (Homo sapiens)
Ensembl gene IDs: ENSG00000176907Ensembl transcript IDs: ENST00000315792.5
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGCATTTTGTTCTCCTCTGTAACAGCACAGGGCATGAAATTGTTTaGAGTCTTTGTAACCAGTCTGTTCAGTCCTGGTCCCTTTCCAGT | + |
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Preference number: 1 (lower is better) Translates to: KHFVLLCNSTGHEIV*SLCNQSVQSWSLSS Trigger: ACTGGAAAGGGACCAGGACTGAACAGACTGGTTACAAAGACTCCAAACAATTTCATGCCCTGTGCTGTTACAGAGGAGAACAAAATGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| 3UTR TCA 90 bp | CATCAATCCTTTCCTGCAGGGACGGAAGAGTTTTCAAATCCTTGCTaGAAGCATTTTGTTCTCCTCTGTAACAGCACAGGGCATGAAATT | + |
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Preference number: 1 (lower is better) Translates to: HQSFPAGTEEFSNPC*KHFVLLCNSTGHEI Trigger: AATTTCATGCCCTGTGCTGTTACAGAGGAGAACAAAATGCTTTCAGCAAGGATTTGAAAACTCTTCCGTCCCTGCAGGAAAGGATTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| 3UTR GCA 90 bp | CTCATTACATCTGTCCAGGCTCTTCTATCAGCATCAATCCTTTCCTaGAGGGACGGAAGAGTTTTCAAATCCTTGCTGAAAGCATTTTGT | + |
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Preference number: 1 (lower is better) Translates to: LITSVQALLSASILS*RDGRVFKSLLKAFC Trigger: ACAAAATGCTTTCAGCAAGGATTTGAAAACTCTTCCGTCCCTGCAGGAAAGGATTGATGCTGATAGAAGAGCCTGGACAGATGTAATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| 3UTR CCA 90 bp | GGTAGCAGCAAAATGCTGCATCTGTTAGAATCTCACAAACTCACTTaGTCTTTGAATGTCCATTCTTGGATAACGTCCTTATCCATCCTC | + |
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Preference number: 1 (lower is better) Translates to: GSSKMLHLLESHKLT*SLNVHSWITSLSIL Trigger: GAGGATGGATAAGGACGTTATCCAAGAATGGACATTCAAAGACCAAGTGAGTTTGTGAGATTCTAACAGATGCAGCATTTTGCTGCTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| 3UTR CAA 90 bp | GCTGAAAGCATTTTGTTCTCCTCTGTAACAGCACAGGGCATGAAATaGTTTGGAGTCTTTGTAACCAGTCTGTTCAGTCCTGGTCCCTTT | + |
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Preference number: 2 (lower is better) Translates to: AESILFSSVTAQGMK*FGVFVTSLFSPGPF Trigger: AAAGGGACCAGGACTGAACAGACTGGTTACAAAGACTCCAAACAATTTCATGCCCTGTGCTGTTACAGAGGAGAACAAAATGCTTTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| 3UTR CAA 90 bp | TTCCTGCAGGGACGGAAGAGTTTTCAAATCCTTGCTGAAAGCATTTaGTTCTCCTCTGTAACAGCACAGGGCATGAAATTGTTTGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: FLQGRKSFQILAESI*FSSVTAQGMKLFGV Trigger: GACTCCAAACAATTTCATGCCCTGTGCTGTTACAGAGGAGAACAAAATGCTTTCAGCAAGGATTTGAAAACTCTTCCGTCCCTGCAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| 3UTR-3UTR CCA 90 bp | TCTTTAGTTCTCATTACATCTGTCCAGGCTCTTCTATCAGCATCAATCCTTTCCTCCCTTTCCAGCCTCTaGAGTCCTGACAGAAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: SLVLITSVQALLSASILSSLSSL*SPDRRE Trigger: TTCTCTTCTGTCAGGACTCCAGAGGCTGGAAAGGGA...GGAAAGGATTGATGCTGATAGAAGAGCCTGGACAGATGTAATGAGAACTAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| 3UTR CAA 90 bp | AGCAAAATGCTGCATCTGTTAGAATCTCACAAACTCACTTGGTCTTaGAATGTCCATTCTTGGATAACGTCCTTATCCATCCTCTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: SKMLHLLESHKLTWS*NVHSWITSLSILFS Trigger: AGAGAAGAGGATGGATAAGGACGTTATCCAAGAATGGACATTCAAAGACCAAGTGAGTTTGTGAGATTCTAACAGATGCAGCATTTTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| 3UTR-3UTR CCA 90 bp | CCTGACAAAGTGACCCTGGATAAATGTCATCTCCAGCCATCTGTTTTCTTTAGTTTGAATGTCCATTCTTaGATAACGTCCTTATCCATC | + |
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Preference number: 2 (lower is better) Translates to: PDKVTLDKCHLQPSVFFSLNVHS*ITSLSI Trigger: GATGGATAAGGACGTTATCCAAGAATGGACATTCAA...ACTAAAGAAAACAGATGGCTGGAGATGACATTTATCCAGGGTCACTTTGTCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| 3UTR-3UTR CCA 90 bp | TCTTTAGTTCTCATTACATCTGTCCAGGCTCTTCTATCAGCATCAATCCTTTCCGGGCATGAAATTGTTTaGAGTCTTTGTAACCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: SLVLITSVQALLSASILSGHEIV*SLCNQS Trigger: AGACTGGTTACAAAGACTCCAAACAATTTCATGCCC...GGAAAGGATTGATGCTGATAGAAGAGCCTGGACAGATGTAATGAGAACTAAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| 3UTR CCA 72 bp | GTTCTCCTCTGTAACAGCACAGGGCATGAAATTGTTTaGAGTCTTTGTAACCAGTCTGTTCAGTCCTGGTCC | + |
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Preference number: 3 (lower is better) Translates to: VLLCNSTGHEIV*SLCNQSVQSWS Trigger: GGACCAGGACTGAACAGACTGGTTACAAAGACTCCAAACAATTTCATGCCCTGTGCTGTTACAGAGGAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| 3UTR TCA 72 bp | TTTCCTGCAGGGACGGAAGAGTTTTCAAATCCTTGCTaGAAGCATTTTGTTCTCCTCTGTAACAGCACAGGG | + |
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Preference number: 3 (lower is better) Translates to: FPAGTEEFSNPC*KHFVLLCNSTG Trigger: CCCTGTGCTGTTACAGAGGAGAACAAAATGCTTTCAGCAAGGATTTGAAAACTCTTCCGTCCCTGCAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| 3UTR GCA 72 bp | TCTGTCCAGGCTCTTCTATCAGCATCAATCCTTTCCTaGAGGGACGGAAGAGTTTTCAAATCCTTGCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: SVQALLSASILS*RDGRVFKSLLK Trigger: TTTCAGCAAGGATTTGAAAACTCTTCCGTCCCTGCAGGAAAGGATTGATGCTGATAGAAGAGCCTGGACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| 3UTR-3UTR CAA 90 bp | CCTGACAAAGTGACCCTGGATAAATGTCATCTCCAGCCATCTGTTTTCTTTAGTATCTCACAAACTCACTaGGTCTTTGAATGTCCATTC | + |
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Preference number: 3 (lower is better) Translates to: PDKVTLDKCHLQPSVFFSISQTH*VFECPF Trigger: GAATGGACATTCAAAGACCAAGTGAGTTTGTGAGAT...ACTAAAGAAAACAGATGGCTGGAGATGACATTTATCCAGGGTCACTTTGTCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| 3UTR TCA 72 bp | CAAACCAAAAGGTGGCGTAAGGTTTTACTGAGTTGCTaGAGACATCTTACTTTCTTGAATTTCTACTTAACA | + |
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Preference number: 3 (lower is better) Translates to: QTKRWRKVLLSC*RHLTFLNFYLT Trigger: TGTTAAGTAGAAATTCAAGAAAGTAAGATGTCTTCAGCAACTCAGTAAAACCTTACGCCACCTTTTGGTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR TCA 90 bp | CTTTGTAACCAGTCTGTTCAGTCCTGGTCCCTTTCCAGTCCCGGTCCCTTTCCACATGGATGGATGGGCTaGCTCGTAGCGACGTGGACA | + |
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Preference number: 4 (lower is better) Translates to: LCNQSVQSWSLSSPGPFPHGWMG*LVATWT Trigger: TGTCCACGTCGCTACGAGTCAGCCCATCCATCCATG...TGGAAAGGGACCGGGACTGGAAAGGGACCAGGACTGAACAGACTGGTTACAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR TCA 90 bp | CTTTGTAACCAGTCTGTTCAGTCCTGGTCCCTTTCCAGTCCCGGTCCCTTTCCAGGCGTAAGGTTTTACTaGGTTGCTGAAGACATCTTA | + |
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Preference number: 4 (lower is better) Translates to: LCNQSVQSWSLSSPGPFPGVRFY*VAEDIL Trigger: TAAGATGTCTTCAGCAACTCAGTAAAACCTTACGCC...TGGAAAGGGACCGGGACTGGAAAGGGACCAGGACTGAACAGACTGGTTACAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR CCA 90 bp | CTTTGTAACCAGTCTGTTCAGTCCTGGTCCCTTTCCAGTCCCGGTCCCTTTCCACGCAGTTTCAGAAACTaGAAAAGCTTGTCTTTTGTC | + |
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Preference number: 4 (lower is better) Translates to: LCNQSVQSWSLSSPGPFPRSFRN*KSLSFV Trigger: GACAAAAGACAAGCTTTTCCAGTTTCTGAAACTGCG...TGGAAAGGGACCGGGACTGGAAAGGGACCAGGACTGAACAGACTGGTTACAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR CCA 90 bp | CAAAATGCTGCATCTGTTAGAATCTCACAAACTCACTTGGTCTTTGAATGTCCACAGTCTGTTCAGTCCTaGTCCCTTTCCAGTCCCGGT | + |
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Preference number: 4 (lower is better) Translates to: QNAASVRISQTHLVFECPQSVQS*SLSSPG Trigger: ACCGGGACTGGAAAGGGACCAGGACTGAACAGACTG...TGGACATTCAAAGACCAAGTGAGTTTGTGAGATTCTAACAGATGCAGCATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR GCA 90 bp | CCTGACAAAGTGACCCTGGATAAATGTCATCTCCAGCCATCTGTTTTCTTTAGTCTTGGCTCTCTCCTCTaGTTTCTTGTCTCCAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: PDKVTLDKCHLQPSVFFSLGSLL*FLVSRV Trigger: AACTCTGGAGACAAGAAAGCAGAGGAGAGAGCCAAG...ACTAAAGAAAACAGATGGCTGGAGATGACATTTATCCAGGGTCACTTTGTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR GCA 90 bp | TCTTTAGTTCTCATTACATCTGTCCAGGCTCTTCTATCAGCATCAATCCTTTCCGCATCAATCCTTTCCTaGAGGGACGGAAGAGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: SLVLITSVQALLSASILSASILS*RDGRVF Trigger: GAAAACTCTTCCGTCCCTGCAGGAAAGGATTGATGC...GGAAAGGATTGATGCTGATAGAAGAGCCTGGACAGATGTAATGAGAACTAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR CCA 90 bp | CTGTTAGAATCTCACAAACTCACTTGGTCTTTGAATGTCCATTCTTGGATAACGGACATGATGACGGCTTaGTGGCTTCGCTTTGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: LLESHKLTWSLNVHSWITDMMTA*WLRFAF Trigger: GAAAGCAAAGCGAAGCCACCAAGCCGTCATCATGTC...CGTTATCCAAGAATGGACATTCAAAGACCAAGTGAGTTTGTGAGATTCTAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR CCA 90 bp | CTGTTAGAATCTCACAAACTCACTTGGTCTTTGAATGTCCATTCTTGGATAACGTCCCTTTCCAGCCTCTaGAGTCCTGACAGAAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: LLESHKLTWSLNVHSWITSLSSL*SPDRRE Trigger: TTCTCTTCTGTCAGGACTCCAGAGGCTGGAAAGGGA...CGTTATCCAAGAATGGACATTCAAAGACCAAGTGAGTTTGTGAGATTCTAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR GCA 90 bp | CTGTTAGAATCTCACAAACTCACTTGGTCTTTGAATGTCCATTCTTGGATAACGTTGGTGGCTTCGCTTTaGTTTCATCGATGTGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: LLESHKLTWSLNVHSWITLVASL*FHRCGD Trigger: ATCCCCACATCGATGAAAGCAAAGCGAAGCCACCAA...CGTTATCCAAGAATGGACATTCAAAGACCAAGTGAGTTTGTGAGATTCTAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR CCA 90 bp | ATCTCACAAACTCACTTGGTCTTTGAATGTCCATTCTTGGATAACGTCCTTATCATGATGACGGCTTGGTaGCTTCGCTTTGCTTTCATC | + |
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Preference number: 4 (lower is better) Translates to: ISQTHLVFECPFLDNVLIMMTAW*LRFAFI Trigger: GATGAAAGCAAAGCGAAGCCACCAAGCCGTCATCAT...GATAAGGACGTTATCCAAGAATGGACATTCAAAGACCAAGTGAGTTTGTGAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR TCA 90 bp | CAAAATGCTGCATCTGTTAGAATCTCACAAACTCACTTGGTCTTTGAATGTCCAGATCTATGGCAAAAATaGTCTTGGCTCTCTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: QNAASVRISQTHLVFECPDLWQK*SWLSPL Trigger: CAGAGGAGAGAGCCAAGATCATTTTTGCCATAGATC...TGGACATTCAAAGACCAAGTGAGTTTGTGAGATTCTAACAGATGCAGCATTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR CCA 90 bp | ATCTCACAAACTCACTTGGTCTTTGAATGTCCATTCTTGGATAACGTCCTTATCTTGCTTTCATCGATGTaGGGATCTTCCGGAATTCAG | + |
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Preference number: 4 (lower is better) Translates to: ISQTHLVFECPFLDNVLILLSSM*GSSGIQ Trigger: CTGAATTCCGGAAGATCCCCACATCGATGAAAGCAA...GATAAGGACGTTATCCAAGAATGGACATTCAAAGACCAAGTGAGTTTGTGAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR TCA 90 bp | CTGTTAGAATCTCACAAACTCACTTGGTCTTTGAATGTCCATTCTTGGATAACGTGTCTCCAGAGTTTCTaGAGAGCCTTTCTAGTGATT | + |
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Preference number: 4 (lower is better) Translates to: LLESHKLTWSLNVHSWITCLQSF*RAFLVI Trigger: AATCACTAGAAAGGCTCTTCAGAAACTCTGGAGACA...CGTTATCCAAGAATGGACATTCAAAGACCAAGTGAGTTTGTGAGATTCTAACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR TCA 90 bp | ATCTCACAAACTCACTTGGTCTTTGAATGTCCATTCTTGGATAACGTCCTTATCCTCTTCAGTGAACTTTaGTGGAATATTTCCGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: ISQTHLVFECPFLDNVLILFSEL*WNISAV Trigger: AACTGCGGAAATATTCCATCAAAGTTCACTGAAGAG...GATAAGGACGTTATCCAAGAATGGACATTCAAAGACCAAGTGAGTTTGTGAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR TCA 90 bp | TCTTTAGTTCTCATTACATCTGTCCAGGCTCTTCTATCAGCATCAATCCTTTCCTCCTCTTCTCTTCAGTaGACTTTGATGGAATATTTC | + |
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Preference number: 4 (lower is better) Translates to: SLVLITSVQALLSASILSSSSLQ*TLMEYF Trigger: GAAATATTCCATCAAAGTTCACTGAAGAGAAGAGGA...GGAAAGGATTGATGCTGATAGAAGAGCCTGGACAGATGTAATGAGAACTAAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR CCA 90 bp | CCTGACAAAGTGACCCTGGATAAATGTCATCTCCAGCCATCTGTTTTCTTTAGTCTTTCTAGTGATTCTTaGTCTGTGTTTTCAAAGATG | + |
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Preference number: 4 (lower is better) Translates to: PDKVTLDKCHLQPSVFFSLSSDS*SVFSKM Trigger: CATCTTTGAAAACACAGACCAAGAATCACTAGAAAG...ACTAAAGAAAACAGATGGCTGGAGATGACATTTATCCAGGGTCACTTTGTCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR CCA 90 bp | TCTTTAGTTCTCATTACATCTGTCCAGGCTCTTCTATCAGCATCAATCCTTTCCTCTCACAAACTCACTTaGTCTTTGAATGTCCATTCT | + |
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Preference number: 4 (lower is better) Translates to: SLVLITSVQALLSASILSSHKLT*SLNVHS Trigger: AGAATGGACATTCAAAGACCAAGTGAGTTTGTGAGA...GGAAAGGATTGATGCTGATAGAAGAGCCTGGACAGATGTAATGAGAACTAAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR CCA 90 bp | CAAAATGCTGCATCTGTTAGAATCTCACAAACTCACTTGGTCTTTGAATGTCCAGGGCATGAAATTGTTTaGAGTCTTTGTAACCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: QNAASVRISQTHLVFECPGHEIV*SLCNQS Trigger: AGACTGGTTACAAAGACTCCAAACAATTTCATGCCC...TGGACATTCAAAGACCAAGTGAGTTTGTGAGATTCTAACAGATGCAGCATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR CCA 90 bp | TCTTTAGTTCTCATTACATCTGTCCAGGCTCTTCTATCAGCATCAATCCTTTCCTTACAAACCAAAAGGTaGCGTAAGGTTTTACTGAGT | + |
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Preference number: 4 (lower is better) Translates to: SLVLITSVQALLSASILSLQTKR*RKVLLS Trigger: ACTCAGTAAAACCTTACGCCACCTTTTGGTTTGTAA...GGAAAGGATTGATGCTGATAGAAGAGCCTGGACAGATGTAATGAGAACTAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR TCA 90 bp | ATCTCACAAACTCACTTGGTCTTTGAATGTCCATTCTTGGATAACGTCCTTATCGTTTTACTGAGTTGCTaGAGACATCTTACTTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: ISQTHLVFECPFLDNVLIVLLSC*RHLTFL Trigger: CAAGAAAGTAAGATGTCTTCAGCAACTCAGTAAAAC...GATAAGGACGTTATCCAAGAATGGACATTCAAAGACCAAGTGAGTTTGTGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR CCA 90 bp | ATCTCACAAACTCACTTGGTCTTTGAATGTCCATTCTTGGATAACGTCCTTATCTTGAATGTCCATTCTTaGATAACGTCCTTATCCATC | + |
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Preference number: 4 (lower is better) Translates to: ISQTHLVFECPFLDNVLILNVHS*ITSLSI Trigger: GATGGATAAGGACGTTATCCAAGAATGGACATTCAA...GATAAGGACGTTATCCAAGAATGGACATTCAAAGACCAAGTGAGTTTGTGAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR CCA 90 bp | TCTTTAGTTCTCATTACATCTGTCCAGGCTCTTCTATCAGCATCAATCCTTTCCGACAATACTCAGGCTTaGAAATATTTTGAACACTCA | + |
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Preference number: 4 (lower is better) Translates to: SLVLITSVQALLSASILSDNTQA*KYFEHS Trigger: TGAGTGTTCAAAATATTTCCAAGCCTGAGTATTGTC...GGAAAGGATTGATGCTGATAGAAGAGCCTGGACAGATGTAATGAGAACTAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS CCA 90 bp | TGGATGGATGGGCTGACTCGTAGCGACGTGGACATGATGACGGCTTaGTGGCTTCGCTTTGCTTTCATCGATGTGGGGATCTTCCGGAAT | + |
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Preference number: 5 (lower is better) Translates to: WMDGLTRSDVDMMTA*WLRFAFIDVGIFRN Trigger: ATTCCGGAAGATCCCCACATCGATGAAAGCAAAGCGAAGCCACCAAGCCGTCATCATGTCCACGTCGCTACGAGTCAGCCCATCCATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS CCA 90 bp | ATGGATGGGCTGACTCGTAGCGACGTGGACATGATGACGGCTTGGTaGCTTCGCTTTGCTTTCATCGATGTGGGGATCTTCCGGAATTCA | + |
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Preference number: 5 (lower is better) Translates to: MDGLTRSDVDMMTAW*LRFAFIDVGIFRNS Trigger: TGAATTCCGGAAGATCCCCACATCGATGAAAGCAAAGCGAAGCCACCAAGCCGTCATCATGTCCACGTCGCTACGAGTCAGCCCATCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR CAA 90 bp | CTTTGTAACCAGTCTGTTCAGTCCTGGTCCCTTTCCAGTCCCGGTCCCTTTCCAGTAACACACAGAATCTaGGTCATCACTCAGACTCTA | + |
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Preference number: 5 (lower is better) Translates to: LCNQSVQSWSLSSPGPFPVTHRI*VITQTL Trigger: TAGAGTCTGAGTGATGACCAAGATTCTGTGTGTTAC...TGGAAAGGGACCGGGACTGGAAAGGGACCAGGACTGAACAGACTGGTTACAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS TCA 90 bp | CTCTTCTTCAAGGCCATCAGGGCACGCGTTTTCTCCTCCACATCTTaGTCTATGGCAAAAATGATCTTGGCTCTCTCCTCTGCTTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: LFFKAIRARVFSSTS*SMAKMILALSSAFL Trigger: CAAGAAAGCAGAGGAGAGAGCCAAGATCATTTTTGCCATAGATCAAGATGTGGAGGAGAAAACGCGTGCCCTGATGGCCTTGAAGAAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS CCA 90 bp | GCTTTCTTGTCTCCAGAGTTTCTGAAGAGCCTTTCTAGTGATTCTTaGTCTGTGTTTTCAAAGATGTTGCCCACGGCTTTCTTACGAGAG | + |
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Preference number: 5 (lower is better) Translates to: AFLSPEFLKSLSSDS*SVFSKMLPTAFLRE Trigger: CTCTCGTAAGAAAGCCGTGGGCAACATCTTTGAAAACACAGACCAAGAATCACTAGAAAGGCTCTTCAGAAACTCTGGAGACAAGAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR CAA 90 bp | ATCTCACAAACTCACTTGGTCTTTGAATGTCCATTCTTGGATAACGTCCTTATCCTTGGTGGCTTCGCTTaGCTTTCATCGATGTGGGGA | + |
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Preference number: 5 (lower is better) Translates to: ISQTHLVFECPFLDNVLILGGFA*LSSMWG Trigger: TCCCCACATCGATGAAAGCAAAGCGAAGCCACCAAG...GATAAGGACGTTATCCAAGAATGGACATTCAAAGACCAAGTGAGTTTGTGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR CAA 90 bp | ATCTCACAAACTCACTTGGTCTTTGAATGTCCATTCTTGGATAACGTCCTTATCGGACATGATGACGGCTaGGTGGCTTCGCTTTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: ISQTHLVFECPFLDNVLIGHDDG*VASLCF Trigger: AAAGCAAAGCGAAGCCACCAAGCCGTCATCATGTCC...GATAAGGACGTTATCCAAGAATGGACATTCAAAGACCAAGTGAGTTTGTGAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR CAA 90 bp | CTGTTAGAATCTCACAAACTCACTTGGTCTTTGAATGTCCATTCTTGGATAACGGTGTTTTCAAAGATGTaGCCCACGGCTTTCTTACGA | + |
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Preference number: 5 (lower is better) Translates to: LLESHKLTWSLNVHSWITVFSKM*PTAFLR Trigger: TCGTAAGAAAGCCGTGGGCAACATCTTTGAAAACAC...CGTTATCCAAGAATGGACATTCAAAGACCAAGTGAGTTTGTGAGATTCTAACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR CAA 90 bp | CAAAATGCTGCATCTGTTAGAATCTCACAAACTCACTTGGTCTTTGAATGTCCAGGAAAAGCTTGTCTTTaGTCCTCTTCTTCAAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: QNAASVRISQTHLVFECPGKACL*SSSSRP Trigger: TGGCCTTGAAGAAGAGGACAAAAGACAAGCTTTTCC...TGGACATTCAAAGACCAAGTGAGTTTGTGAGATTCTAACAGATGCAGCATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR CAA 90 bp | CAAAATGCTGCATCTGTTAGAATCTCACAAACTCACTTGGTCTTTGAATGTCCAGCACAGGGCATGAAATaGTTTGGAGTCTTTGTAACC | + |
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Preference number: 5 (lower is better) Translates to: QNAASVRISQTHLVFECPAQGMK*FGVFVT Trigger: GGTTACAAAGACTCCAAACAATTTCATGCCCTGTGC...TGGACATTCAAAGACCAAGTGAGTTTGTGAGATTCTAACAGATGCAGCATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR CAA 90 bp | TCTTTAGTTCTCATTACATCTGTCCAGGCTCTTCTATCAGCATCAATCCTTTCCCTTGCTGAAAGCATTTaGTTCTCCTCTGTAACAGCA | + |
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Preference number: 5 (lower is better) Translates to: SLVLITSVQALLSASILSLAESI*FSSVTA Trigger: TGCTGTTACAGAGGAGAACAAAATGCTTTCAGCAAG...GGAAAGGATTGATGCTGATAGAAGAGCCTGGACAGATGTAATGAGAACTAAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR CAA 90 bp | CCTGACAAAGTGACCCTGGATAAATGTCATCTCCAGCCATCTGTTTTCTTTAGTTTTGAATGTCCATTCTaGGATAACGTCCTTATCCAT | + |
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Preference number: 5 (lower is better) Translates to: PDKVTLDKCHLQPSVFFSFECPF*DNVLIH Trigger: ATGGATAAGGACGTTATCCAAGAATGGACATTCAAA...ACTAAAGAAAACAGATGGCTGGAGATGACATTTATCCAGGGTCACTTTGTCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS TCA 90 bp | TTCTTGGATAACGTCCTTATCCATCCTCTTCTCTTCAGTGAACTTTaGTGGAATATTTCCGCAGTTTCAGAAACTGGAAAAGCTTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: FLDNVLIHPLLFSEL*WNISAVSETGKACL Trigger: AAGACAAGCTTTTCCAGTTTCTGAAACTGCGGAAATATTCCATCAAAGTTCACTGAAGAGAAGAGGATGGATAAGGACGTTATCCAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR CAA 90 bp | ATCTCACAAACTCACTTGGTCTTTGAATGTCCATTCTTGGATAACGTCCTTATCATCTCACAAACTCACTaGGTCTTTGAATGTCCATTC | + |
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Preference number: 5 (lower is better) Translates to: ISQTHLVFECPFLDNVLIISQTH*VFECPF Trigger: GAATGGACATTCAAAGACCAAGTGAGTTTGTGAGAT...GATAAGGACGTTATCCAAGAATGGACATTCAAAGACCAAGTGAGTTTGTGAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS-3UTR CAA 90 bp | ATCTCACAAACTCACTTGGTCTTTGAATGTCCATTCTTGGATAACGTCCTTATCTTTCTCCTCCACATCTaGATCTATGGCAAAAATGAT | + |
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Preference number: 5 (lower is better) Translates to: ISQTHLVFECPFLDNVLIFLLHI*IYGKND Trigger: ATCATTTTTGCCATAGATCAAGATGTGGAGGAGAAA...GATAAGGACGTTATCCAAGAATGGACATTCAAAGACCAAGTGAGTTTGTGAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS CCA 72 bp | GGGCTGACTCGTAGCGACGTGGACATGATGACGGCTTaGTGGCTTCGCTTTGCTTTCATCGATGTGGGGATC | + |
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Preference number: 6 (lower is better) Translates to: GLTRSDVDMMTA*WLRFAFIDVGI Trigger: GATCCCCACATCGATGAAAGCAAAGCGAAGCCACCAAGCCGTCATCATGTCCACGTCGCTACGAGTCAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS GCA 72 bp | CGACGTGGACATGATGACGGCTTGGTGGCTTCGCTTTaGTTTCATCGATGTGGGGATCTTCCGGAATTCAGC | + |
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Preference number: 6 (lower is better) Translates to: RRGHDDGLVASL*FHRCGDLPEFS Trigger: GCTGAATTCCGGAAGATCCCCACATCGATGAAAGCAAAGCGAAGCCACCAAGCCGTCATCATGTCCACGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS CCA 72 bp | CTGACTCGTAGCGACGTGGACATGATGACGGCTTGGTaGCTTCGCTTTGCTTTCATCGATGTGGGGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: LTRSDVDMMTAW*LRFAFIDVGIF Trigger: GAAGATCCCCACATCGATGAAAGCAAAGCGAAGCCACCAAGCCGTCATCATGTCCACGTCGCTACGAGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS CAA 90 bp | CCTCTTCTTCAAGGCCATCAGGGCACGCGTTTTCTCCTCCACATCTaGATCTATGGCAAAAATGATCTTGGCTCTCTCCTCTGCTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: PLLQGHQGTRFLLHI*IYGKNDLGSLLCFL Trigger: AAGAAAGCAGAGGAGAGAGCCAAGATCATTTTTGCCATAGATCAAGATGTGGAGGAGAAAACGCGTGCCCTGATGGCCTTGAAGAAGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS CCA 72 bp | TCTCCAGAGTTTCTGAAGAGCCTTTCTAGTGATTCTTaGTCTGTGTTTTCAAAGATGTTGCCCACGGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SPEFLKSLSSDS*SVFSKMLPTAF Trigger: GAAAGCCGTGGGCAACATCTTTGAAAACACAGACCAAGAATCACTAGAAAGGCTCTTCAGAAACTCTGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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| CDS CCA 72 bp | TCTCACAAACTCACTTGGTCTTTGAATGTCCATTCTTaGATAACGTCCTTATCCATCCTCTTCTCTTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: SHKLTWSLNVHS*ITSLSILFSSV Trigger: CACTGAAGAGAAGAGGATGGATAAGGACGTTATCCAAGAATGGACATTCAAAGACCAAGTGAGTTTGTGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315792.5 |
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