RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TCHHL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000182898

Ensembl transcript IDs: ENST00000368806.2

Found 237 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAAGTATTGAGGGTGATTaGGAGAGAAATTGGGGGCAT +
Preference number: 2 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQSIEGD*ERNWGH
Trigger: ATGCCCCCAATTTCTCTCCCAATCACCCTCAATACT...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368806.2
3UTR-3UTR TCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAATTGTTAATCTGCATCTaGATGTGTACACGTGAGTAT +
Preference number: 2 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQLLICI*MCTREY
Trigger: ATACTCACGTGTACACATTCAGATGCAGATTAACAA...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
3UTR-3UTR CAA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGATGACAAAGCCCATTTaGGCATTTGGAAGTAGCATT +
Preference number: 3 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQEMTKPI*AFGSSI
Trigger: AATGCTACTTCCAAATGCCAAAATGGGCTTTGTCAT...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCCTCCACAGCTGCACCTaGGCCTTTGGTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLLHSCT*AFGPWA
Trigger: GGCCCAGGGACCAAAGGCCCAGGTGCAGCTGTGGAG...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGCCATGTTGGTCCCCTTaGCTCTGGGAGTCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQEPCWSP*LWESPC
Trigger: GCAAGGGGACTCCCAGAGTCAAGGGGACCAACATGG...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGATTGGGCTCCACAGCTaGACCTGGGCCTTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQEIGLHS*TWAFGP
Trigger: GGGACCAAAGGCCCAGGTGCAGCTGTGGAGCCCAAT...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGTGCCCTGCTGTTCCATaGGCCTCAGGACCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQECPAVP*ASGPLL
Trigger: GAGGAGAGGTCCTGAGGCCCATGGAACAGCAGGGCA...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGCAAGGCCTGGGGAGCTaGTGTTTCCTGTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQEQGLGS*CFLCTS
Trigger: GCTGGTGCACAGGAAACACCAGCTCCCCAGGCCTTG...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGCTCTGGGAGTCCCCTTaGACAGGCAGTTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQELWESP*TGSSPV
Trigger: GACAGGTGAACTGCCTGTGCAAGGGGACTCCCAGAG...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGCTCTCCTCTGACTGCTaGTACCACTGCCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQELSSDC*YHCLQS
Trigger: GCTCTGGAGGCAGTGGTACCAGCAGTCAGAGGAGAG...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGCTGCACCTGGGCCTTTaGTCCCTGGGCCTTGATTCT +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQELHLGL*SLGLDS
Trigger: AGAATCAAGGCCCAGGGACCAAAGGCCCAGGTGCAG...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAACTCTGTGTGAATGGTaGCTCAGGGTCCTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQTLCEW*LRVLPL
Trigger: CAGGGGGAGGACCCTGAGTCACCATTCACACAGAGT...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGCAAAGCTCTGGGCCTaGTGCCTGGGCTATCTGAAC +
Preference number: 4 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQAKLWA*CLGYLN
Trigger: GTTCAGATAGCCCAGGCATCAGGCCCAGAGCTTTGC...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGCAGGTCAGCATGCTGTaGACTGGGCTCATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQEQVSML*TGLIFS
Trigger: AGAGAAGATGAGCCCAGTTCACAGCATGCTGACCTG...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAACTGTGTCTGAGATGGTaGCCTGGCAGCAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQLCLRW*PGSSLF
Trigger: GAACAAGCTGCTGCCAGGTCACCATCTCAGACACAG...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGTACATCCTCTCCTCTaGCTGCTGGTACCACTGCCT +
Preference number: 4 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQVHPLL*LLVPLP
Trigger: AGGCAGTGGTACCAGCAGTCAGAGGAGAGGATGTAC...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCGGGAAAGCTGGTCAGTaGAGTCTTCATCCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLGKAGQ*SLHPGH
Trigger: GTGCCCTGGATGAAGACTTCACTGACCAGCTTTCCC...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGTCTGCCAGTCAGTGTTaGCCCGTTACTGTCCTCACT +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQESASQC*PVTVLT
Trigger: AGTGAGGACAGTAACGGGGCAACACTGACTGGCAGA...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCACGTTCTTTCTGCCCTaGTGTTCCATGGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLTFFLP*CSMGLR
Trigger: CCTGAGGCCCATGGAACAGCAGGGCAGAAAGAACGT...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTCTGTCACGTTCTTTCTaGCCTGCTGTTCCATGGGCC +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCLSRSF*PAVPWA
Trigger: GGCCCATGGAACAGCAGGGCAGAAAGAACGTGACAG...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAATCCTCTCCTCTGACTaGTGGTACCACTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQILSSD*WYHCLQ
Trigger: CTGGAGGCAGTGGTACCAGCAGTCAGAGGAGAGGAT...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTCTGGCAGGCTGTTCCTaGTCCTCTGTGAGCTGTACA +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCLAGCS*SSVSCT
Trigger: TGTACAGCTCACAGAGGACCAGGAACAGCCTGCCAG...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGTGGGCCTTTGGTCCCTaGGCCTTGATTCTTGTGTTC +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQEWAFGP*ALILVF
Trigger: GAACACAAGAATCAAGGCCCAGGGACCAAAGGCCCA...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTGGATTCCTGTGCTTCTaGGTGTCCATTGGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCGFLCF*VSIGLH
Trigger: GTGGAGCCCAATGGACACCCAGAAGCACAGGAATCC...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCCAAACTCGCCCTGGATaGGTTGTTTCAGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLQTRPG*VVSALC
Trigger: GCAGAGAGCTGAAACAACTCATCCAGGGCGAGTTTG...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTTCTCCGGTGGTTGCCTaGACATCCACATCATCTAGC +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCSPVVA*TSTSSS
Trigger: GCTAGATGATGTGGATGTTCAGGCAACCACCGGAGA...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTCAGTTCACCTGTCTCTaGGCTGCTATTGCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCQFTCL*AAIAFL
Trigger: GAGGAAGGCAATAGCAGCTCAGAGACAGGTGAACTG...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTTTGGTCCCTGGGCCTTaGTTCTTGTGTTCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCLVPGP*FLCSPL
Trigger: CAGAGGAGAACACAAGAATCAAGGCCCAGGGACCAA...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCCATCCAGGGCACCTGTaGTCTCTATTTCCAGGGACT +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLHPGHL*SLFPGT
Trigger: AGTCCCTGGAAATAGAGATCACAGGTGCCCTGGATG...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTTCTGGCAGGTCAGCATaGTGTGAACTGGGCTCATCT +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCSGRSA*CELGSS
Trigger: AGATGAGCCCAGTTCACAGCATGCTGACCTGCCAGA...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAATCTCTGAGCTGCTATTaGCTTCCTCTGAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQSLSCY*LPLKPG
Trigger: GCCTGGCTTCAGAGGAAGGCAATAGCAGCTCAGAGA...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAATCACCAGGTGTTCCCTaGCTCTGGGTATCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQSPGVP*LWVSGL
Trigger: TAACCCAGATACCCAGAGGCAGGGAACACCTGGTGA...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCTGCTGTGGATTCCTGTaGTTCTGGGTGTCCATTGGG +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLCCGFL*FWVSIG
Trigger: CCCAATGGACACCCAGAAGCACAGGAATCCACAGCA...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGTGGACTGGAATAGACTaGACCCCTCTCCACAGAACA +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQEWTGID*TPLHRT
Trigger: TGTTCTGTGGAGAGGGGTGCAGTCTATTCCAGTCCA...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCTCTGAGATGGTGACCTaGCAGCAGCTTGTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLSEMVT*QQLVLA
Trigger: TGCCAGAACAAGCTGCTGCCAGGTCACCATCTCAGA...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGTTCCCATCCTGTGTTTaGGTTTCCAGGACTAGTGGC +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQEFPSCV*VSRTSG
Trigger: GCCACTAGTCCTGGAAACCCAAACACAGGATGGGAA...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTCTGAAGCCAGGCTGTTaGGAGTTTCAGAAGACCCCT +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCLKPGC*EFQKTP
Trigger: AGGGGTCTTCTGAAACTCCCAACAGCCTGGCTTCAG...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGTCTTCAGGGATGAGCTaGGATGATGATGCCATTCCT +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQESSGMS*DDDAIP
Trigger: AGGAATGGCATCATCATCTCAGCTCATCCCTGAAGA...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCCTGAGATCTCACTGGTaGGGGATACACTGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLLRSHW*GIHCKA
Trigger: AGCTTTGCAGTGTATCCCTCACCAGTGAGATCTCAG...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTACCATCTCCGGTGGTTaGCTGAACATCCACATCATC +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCTISGG*LNIHII
Trigger: GATGATGTGGATGTTCAGGCAACCACCGGAGATGGT...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGGGGTCTCAGATGTTCTaGCATAATCCTCAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQEGSQMF*HNPQVH
Trigger: GTGAACCTGAGGATTATGGCAGAACATCTGAGACCC...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGACTGCTGGTACCACTaGCTCCAGAGCTCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQDCWYH*LQSSVF
Trigger: AAAAACAGAGCTCTGGAGGCAGTGGTACCAGCAGTC...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTTCCCCAAACTCGCCCTaGATGAGTTGTTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCSPNSP*MSCFSS
Trigger: AGAGCTGAAACAACTCATCCAGGGCGAGTTTGGGGA...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAACTGACCATCTCCGGTaGTTGCCTGAACATCCACAT +
Preference number: 4 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQTDHLR*LPEHPH
Trigger: ATGTGGATGTTCAGGCAACCACCGGAGATGGTCAGT...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAACTTTGCTCTCTGGCTaGTTCATCTCCTTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQTLLSG*FISFLG
Trigger: TCCCAGGAAGGAGATGAACCAGCCAGAGAGCAAAGT...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTCTGCTGTGCCTTCTTTaGTGTGTTCTGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCLLCLL*CVLPLL
Trigger: GAGAAGAGGCAGAACACACCAAAGAAGGCACAGCAG...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGCTGCCTCTGGGTATCTaGGTTATTATTGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQELPLGI*VIIVTS
Trigger: GGAGGTCACAATAATAACCCAGATACCCAGAGGCAG...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCCTTTTCTTGAGTTGGTaGAGTTCCCACTGTCCACTG +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLLFLSW*SSHCPL
Trigger: CAGTGGACAGTGGGAACTTCACCAACTCAAGAAAAG...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGAGCATCCTCTTTTCTTaGGTTGGTGAAGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQESILFS*VGEVPT
Trigger: AGTGGGAACTTCACCAACTCAAGAAAAGAGGATGCT...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCCACTTTCTTCAGGGATaGGCTGAGATGATGATGCCA +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLHFLQG*AEMMMP
Trigger: TGGCATCATCATCTCAGCTCATCCCTGAAGAAAGTG...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAATCTCCTGGAAAGTTGTaGGTCTTGGCTTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQSPGKL*VLASLH
Trigger: ATGGAGAGAAGCCAAGACTCACAACTTTCCAGGAGA...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGTGCTTCTTTTGGTGGTaGACTTTGGGTTGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQECFFWW*TLGCQV
Trigger: AACTTGGCAACCCAAAGTTCACCACCAAAAGAAGCA...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCTCAACTGGTTGGTCATaGGTCTTGGTGACCCTAGTA +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLSTGWS*VLVTLV
Trigger: TACTAGGGTCACCAAGACTCATGACCAACCAGTTGA...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGCCTTTCTGCTGCAGGTaGGTTTTTGCTGTTCACAAA +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQEPFCCR*VFAVHK
Trigger: TTTGTGAACAGCAAAAACGCACCTGCAGCAGAAAGG...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAACAGTGTCCTTTCTGCTaGAGGTGCGTTTTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQQCPFC*RCVFAV
Trigger: AACAGCAAAAACGCACCTGCAGCAGAAAGGACACTG...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCGAAAGTTGTGAGTCTTaGCTTCTCTCCATGGGTCCA +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLESCES*LLSMGP
Trigger: TGGACCCATGGAGAGAAGCCAAGACTCACAACTTTC...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGGGTTCATCTCCTTCCTaGGAGATCTCCTTATCTTGT +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQEGSSPS*EISLSC
Trigger: ACAAGATAAGGAGATCTCCCAGGAAGGAGATGAACC...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTGTTTTAGCTGGTGTCTaGTCAGCATCCTTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCVLAGV*SASFPG
Trigger: ACCAGGAAAGGATGCTGACCAGACACCAGCTAAAAC...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCTTTCATCTCCTGCTGTaGATTCCTGTGCTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLFHLLL*IPVLLG
Trigger: ACCCAGAAGCACAGGAATCCACAGCAGGAGATGAAA...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTACTGGTATAGTGGACTaGAATAGACTGCACCCCTCT +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCTGIVD*NRLHPS
Trigger: AGAGGGGTGCAGTCTATTCCAGTCCACTATACCAGT...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTAGGACTCTCATCAAGTaGAAGTCCCCTGGTATATGG +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCRTLIK*KSPGIW
Trigger: CCATATACCAGGGGACTTCCACTTGATGAGAGTCCT...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGAGTATTGAGGGTGATTaGGAGAGAAATTGGGGGCAT +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQESIEGD*ERNWGH
Trigger: ATGCCCCCAATTTCTCTCCCAATCACCCTCAATACT...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAAATCCTTGGAGTTCCTaGTACTTCCCATCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQNPWSS*YFPSCV
Trigger: AACACAGGATGGGAAGTATCAGGAACTCCAAGGATT...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCTCTGGGTTATTATTGTaGCCTCCTTGCACAGACTCT +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLSGLLL*PPCTDS
Trigger: AGAGTCTGTGCAAGGAGGTCACAATAATAACCCAGA...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGTTTCAAGTTGTATCTTaGGGGAGGCTGAATTGTCCT +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQEFQVVS*GRLNCP
Trigger: AGGACAATTCAGCCTCCCTCAAGATACAACTTGAAA...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAAAAGACAGAACAATCTaGGATCTCACTGGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQKDRTI*DLTGEG
Trigger: TCCCTCACCAGTGAGATCTCAGATTGTTCTGTCTTT...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTCCTGGTATATGGTTGTaGTGCTTGGCTGTAGTTGAA +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCPGIWL*CLAVVE
Trigger: TTCAACTACAGCCAAGCATCACAACCATATACCAGG...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCCAAATGCTTCTGCTGTaGCTTCTTTGGTGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLQMLLL*LLWCVL
Trigger: CAGAACACACCAAAGAAGGCACAGCAGAAGCATTTG...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTGTTCACAAATGCTTCTaGTGTGCCTTCTTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCVHKCF*CAFFGV
Trigger: CACACCAAAGAAGGCACAGCAGAAGCATTTGTGAAC...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTCTGCAGGTGCGTTTTTaGTGTTCACAAATGCTTCTG +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCLQVRF*CSQMLL
Trigger: CAGAAGCATTTGTGAACAGCAAAAACGCACCTGCAG...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCTTCCTTTCTCTTCTTTaGTACTTGGGCCTTGGACCT +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLFLSLL*YLGLGP
Trigger: AGGTCCAAGGCCCAAGTAGCAAAGAAGAGAAAGGAA...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCGGGACTGAAGAATTGTaGTCTTTCTTGGCTGGACTT +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLGTEEL*SFLAGL
Trigger: AAGTCCAGCCAAGAAAGAGCACAATTCTTCAGTCCC...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAATGGTCTCTCTGCATCTaGTTTTCAAGACTTGACCAG +
Preference number: 4 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQWSLCI*FSRLDQ
Trigger: CTGGTCAAGTCTTGAAAAGCAGATGCAGAGAGACCA...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCTTCAGATGCTTCTCCTaGAAAGTTGTGAGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLFRCFS*KVVSLG
Trigger: GCCAAGACTCACAACTTTCCAGGAGAAGCATCTGAA...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTAAACACTTTGCTCTCTaGCTGGTTCATCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCKHFAL*LVHLLP
Trigger: AGGAAGGAGATGAACCAGCCAGAGAGCAAAGTGTTT...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTTTTGGTGGTGAACTTTaGGTTGCCAAGTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCFGGEL*VAKFPS
Trigger: GGAAGGAAACTTGGCAACCCAAAGTTCACCACCAAA...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTCAGCATGCTGTGAACTaGGCTCATCTTCTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCQHAVN*AHLLFV
Trigger: TACAAAGAGAAGATGAGCCCAGTTCACAGCATGCTG...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTGCTACCATATTGGACTaGCAGGTCCTTTGTTTCACA +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCATILD*QVLCFT
Trigger: TGTGAAACAAAGGACCTGCCAGTCCAATATGGTAGC...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCTGCATTAGGGAAAGCTaGTCAGTGAAGTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLCIRES*SVKSSS
Trigger: GGATGAAGACTTCACTGACCAGCTTTCCCTAATGCA...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTTCTAACAGAGTATTCTaGGCCTCTGTTGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCSNRVF*ASVALP
Trigger: AGGAAGAGCAACAGAGGCCCAGAATACTCTGTTAGA...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCCAAGTGGAAGTCCCCTaGTATATGGTTGTGATGCTT +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLQVEVP*YMVVML
Trigger: AAGCATCACAACCATATACCAGGGGACTTCCACTTG...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGAGTAGACTCACTGGATaGTTGGTTACAAGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQESRLTG*LVTRAS
Trigger: AGAAGCTCTTGTAACCAACCATCCAGTGAGTCTACT...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCATCCTTGGAATCAGTTaGTTTCTGTGTCTGAGATGG +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLILGIS*FLCLRW
Trigger: CCATCTCAGACACAGAAATCAACTGATTCCAAGGAT...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCTCCTTTCCTGGTTCTTaGGTGTCAAACATTCTACAG +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLSFPGS*VSNILQ
Trigger: CTGTAGAATGTTTGACACTCAAGAACCAGGAAAGGA...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTTTCATCTTCCTCCTCTaGTGTTACAGGTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCFIFLL*CYRFLC
Trigger: ACAAAGGAACCTGTAACATCAGAGGAGGAAGATGAA...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGTGTTGGATGAGTAATTaGAAGAATGAATCCATGGCG +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQECWMSN*KNESMA
Trigger: CGCCATGGATTCATTCTTTCAATTACTCATCCAACA...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTTCTATTTTCATCTCCTaGTGTGGATTCCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCSIFIS*CGFLCF
Trigger: GAAGCACAGGAATCCACAGCAGGAGATGAAAATAGA...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGGTTACATTTGTTTGCTaGAGTATCTTCTCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQEVTFVC*SIFSCR
Trigger: CCTACAGGAGAAGATACTGCAGCAAACAAATGTAAC...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTTTCATTGCTTTGTGGTaGTTGCCTCCCTTTGTAGTA +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCFIALW*LPPFVV
Trigger: TACTACAAAGGGAGGCAAGCACCACAAAGCAATGAA...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAACTGGTCTCTTATCTTaGAAACACTTTGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQTGLLS*KHFALW
Trigger: CCAGAGAGCAAAGTGTTTCCAAGATAAGAGACCAGT...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCGTCAGCATCCTTTCCTaGTTCTTGAGTGTCAAACAT +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLVSILS*FLSVKH
Trigger: ATGTTTGACACTCAAGAACCAGGAAAGGATGCTGAC...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAATTTCTGCTACCATATTaGACTGGCAGGTCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQFLLPY*TGRSFV
Trigger: AACAAAGGACCTGCCAGTCCAATATGGTAGCAGAAA...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGGACTCACTGGATGGTTaGTTACAAGAGCTTCTTATA +
Preference number: 4 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQEDSLDG*LQELLI
Trigger: TATAAGAAGCTCTTGTAACCAACCATCCAGTGAGTC...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTTCTGTTCTAACTTCCTaGTCTTCACATGGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCSVLTS*SSHGLC
Trigger: ACAAAGACCATGTGAAGATCAGGAAGTTAGAACAGA...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCCATGTCAGATGTTTCTaGACCATTTCTGCTACCATA +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLHVRCF*TISATI
Trigger: TATGGTAGCAGAAATGGTTCAGAAACATCTGACATG...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAATCATTGTGTTCAGATaGTTCTCCTGGAAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQIIVFR*FSWKVV
Trigger: CACAACTTTCCAGGAGAAGCATCTGAACACAATGAT...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTTTTCTGAACCATTTCTaGTACCATATTGGACTGGCA +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCFLNHF*YHIGLA
Trigger: TGCCAGTCCAATATGGTAGCAGAAATGGTTCAGAAA...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTTTTGCTGTTCACAAATaGTTCTGCTGTGCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCFAVHK*FCCAFF
Trigger: AAAGAAGGCACAGCAGAAGCATTTGTGAACAGCAAA...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR GCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAATTTTCTCCTACAGACTaGTTCTCAAGTGGTGCTAAA +
Preference number: 4 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQFSPTD*FSSGAK
Trigger: TTTAGCACCACTTGAGAAGCAGTCTGTAGGAGAAAA...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTTCCTGTTCTCCAAACTaGTCTCTTATCTTGGAAACA +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCSCSPN*SLILET
Trigger: TGTTTCCAAGATAAGAGACCAGTTTGGAGAACAGGA...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAATTCTTTGTTTTAGCTaGTGTCTGGTCAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQILCFS*CLVSIL
Trigger: AAGGATGCTGACCAGACACCAGCTAAAACAAAGAAT...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTTTGCTACTTGGGCCTTaGACCTTTAATTCATTTCTG +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCLLLGP*TFNSFL
Trigger: CAGAAATGAATTAAAGGTCCAAGGCCCAAGTAGCAA...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAATCAGTTGGAAAAACTaGCACCTGCTAAAGATATGG +
Preference number: 4 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQISWKN*HLLKIW
Trigger: CCATATCTTTAGCAGGTGCCAGTTTTTCCAACTGAT...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAAAATTGGGGGCATGTTaGGATGATAATGATTCATTG +
Preference number: 4 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQKLGAC*DDNDSL
Trigger: CAATGAATCATTATCATCTCAACATGCCCCCAATTT...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR TCA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTTTGTTAATCTGCATCTaGATGTGTACACGTGAGTAT +
Preference number: 4 (lower is better)
Translates to: EVALFGRSFTDCICLLRCLLICI*MCTREY
Trigger: ATACTCACGTGTACACATTCAGATGCAGATTAACAA...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAATTCCTGATCTTCACATaGTCTTTGTGTTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQFLIFT*SLCCFF
Trigger: AAAGAAGCAACACAAAGACCATGTGAAGATCAGGAA...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CCA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCTTCTACAGACATCCTTaGAATCAGTTGATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: HLEVALFGRSFTDCICLLFYRHP*NQLISV
Trigger: CACAGAAATCAACTGATTCCAAGGATGTCTGTAGAA...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS TCA 90 bp CCATTGGGCTCCACAGCTGCACCTGGGCCTTTGGTCCCTGGGCCTTaGTTCTTGTGTTCTCCTCTGGCAGGCTGTTCCTGGTCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: PLGSTAAPGPLVPGP*FLCSPLAGCSWSSV
Trigger: CACAGAGGACCAGGAACAGCCTGCCAGAGGAGAACACAAGAATCAAGGCCCAGGGACCAAAGGCCCAGGTGCAGCTGTGGAGCCCAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 90 bp TGGGTGTCCATTGGGCTCCACAGCTGCACCTGGGCCTTTGGTCCCTaGGCCTTGATTCTTGTGTTCTCCTCTGGCAGGCTGTTCCTGGTC +
Preference number: 5 (lower is better)
Translates to: WVSIGLHSCTWAFGP*ALILVFSSGRLFLV
Trigger: GACCAGGAACAGCCTGCCAGAGGAGAACACAAGAATCAAGGCCCAGGGACCAAAGGCCCAGGTGCAGCTGTGGAGCCCAATGGACACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS TCA 90 bp GCTGTTGGGAGTTTCAGAAGACCCCTCATCACTCTGTGTGAATGGTaGCTCAGGGTCCTCCCCCTGGTAACCATCCTCCTCCTCAACTGG +
Preference number: 5 (lower is better)
Translates to: AVGSFRRPLITLCEW*LRVLPLVTILLLNW
Trigger: CCAGTTGAGGAGGAGGATGGTTACCAGGGGGAGGACCCTGAGTCACCATTCACACAGAGTGATGAGGGGTCTTCTGAAACTCCCAACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS TCA 90 bp AAGCCAGGCTGTTGGGAGTTTCAGAAGACCCCTCATCACTCTGTGTaGATGGTGACTCAGGGTCCTCCCCCTGGTAACCATCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: KPGCWEFQKTPHHSV*MVTQGPPPGNHPPP
Trigger: AGGAGGAGGATGGTTACCAGGGGGAGGACCCTGAGTCACCATTCACACAGAGTGATGAGGGGTCTTCTGAAACTCCCAACAGCCTGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 90 bp TATTTTCATCTCCTGCTGTGGATTCCTGTGCTTCTGGGTGTCCATTaGGCTCCACAGCTGCACCTGGGCCTTTGGTCCCTGGGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: YFHLLLWIPVLLGVH*APQLHLGLWSLGLD
Trigger: ATCAAGGCCCAGGGACCAAAGGCCCAGGTGCAGCTGTGGAGCCCAATGGACACCCAGAAGCACAGGAATCCACAGCAGGAGATGAAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 90 bp CAGGGACTTTCTATTTTCATCTCCTGCTGTGGATTCCTGTGCTTCTaGGTGTCCATTGGGCTCCACAGCTGCACCTGGGCCTTTGGTCCC +
Preference number: 5 (lower is better)
Translates to: QGLSIFISCCGFLCF*VSIGLHSCTWAFGP
Trigger: GGGACCAAAGGCCCAGGTGCAGCTGTGGAGCCCAATGGACACCCAGAAGCACAGGAATCCACAGCAGGAGATGAAAATAGAAAGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 90 bp CTCTCTCTGAGGGTGACCTTGCTTATCTTCCAAGGCCTGGGGAGCTaGTGTTTCCTGTGCACCAGCAGGACTCTCATCAAGTGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: LSLRVTLLIFQGLGS*CFLCTSRTLIKWKS
Trigger: GGACTTCCACTTGATGAGAGTCCTGCTGGTGCACAGGAAACACCAGCTCCCCAGGCCTTGGAAGATAAGCAAGGTCACCCTCAGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS GCA 90 bp TGGGTTTCCAGGACTAGTGGCCGAGTTTTTCTGTCACGTTCTTTCTaGCCTGCTGTTCCATGGGCCTCAGGACCTCTCCTCTCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: WVSRTSGRVFLSRSF*PAVPWASGPLLSFL
Trigger: AAGGAAAGAGAGGAGAGGTCCTGAGGCCCATGGAACAGCAGGGCAGAAAGAACGTGACAGAAAAACTCGGCCACTAGTCCTGGAAACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 90 bp TTGTTTGCTGCAGTATCTTCTCCTGTAGGTACTGGTATAGTGGACTaGAATAGACTGCACCCCTCTCCACAGAACAGGGCTCTTGGTCTC +
Preference number: 5 (lower is better)
Translates to: LFAAVSSPVGTGIVD*NRLHPSPQNRALGL
Trigger: GAGACCAAGAGCCCTGTTCTGTGGAGAGGGGTGCAGTCTATTCCAGTCCACTATACCAGTACCTACAGGAGAAGATACTGCAGCAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS GCA 90 bp TTTCTGCTGCAGGTGCGTTTTTGCTGTTCACAAATGCTTCTGCTGTaGCTTCTTTGGTGTGTTCTGCCTCTTCTCCTGAGACTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: FLLQVRFCCSQMLLL*LLWCVLPLLLRLLF
Trigger: GAACAGCAGTCTCAGGAGAAGAGGCAGAACACACCAAAGAAGGCACAGCAGAAGCATTTGTGAACAGCAAAAACGCACCTGCAGCAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS GCA 90 bp TTCTTTCTCTTGCCCCCAGTGTCCTTTCTGCTGCAGGTGCGTTTTTaGTGTTCACAAATGCTTCTGCTGTGCCTTCTTTGGTGTGTTCTG +
Preference number: 5 (lower is better)
Translates to: FFLLPPVSFLLQVRF*CSQMLLLCLLWCVL
Trigger: CAGAACACACCAAAGAAGGCACAGCAGAAGCATTTGTGAACAGCAAAAACGCACCTGCAGCAGAAAGGACACTGGGGGCAAGAGAAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 90 bp GGGTTGCCAAGTTTCCTTCCTGTTCTCCAAACTGGTCTCTTATCTTaGAAACACTTTGCTCTCTGGCTGGTTCATCTCCTTCCTGGGAGA +
Preference number: 5 (lower is better)
Translates to: GLPSFLPVLQTGLLS*KHFALWLVHLLPGR
Trigger: TCTCCCAGGAAGGAGATGAACCAGCCAGAGAGCAAAGTGTTTCCAAGATAAGAGACCAGTTTGGAGAACAGGAAGGAAACTTGGCAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS TCA 90 bp TCAAACATTCTACAGACATCCTTGGAATCAGTTGATTTCTGTGTCTaGGATGGTGACCTGGCAGCAGCTTGTTCTGGCAGGTCAGCATGC +
Preference number: 5 (lower is better)
Translates to: SNILQTSLESVDFCV*DGDLAAACSGRSAC
Trigger: GCATGCTGACCTGCCAGAACAAGCTGCTGCCAGGTCACCATCTCAGACACAGAAATCAACTGATTCCAAGGATGTCTGTAGAATGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 90 bp CCTGTTCTCCAAACTGGTCTCTTATCTTGGAAACACTTTGCTCTCTaGCTGGTTCATCTCCTTCCTGGGAGATCTCCTTATCTTGTCCCT +
Preference number: 5 (lower is better)
Translates to: PVLQTGLLSWKHFAL*LVHLLPGRSPYLVP
Trigger: AGGGACAAGATAAGGAGATCTCCCAGGAAGGAGATGAACCAGCCAGAGAGCAAAGTGTTTCCAAGATAAGAGACCAGTTTGGAGAACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 90 bp CAGGTGCGTTTTTGCTGTTCACAAATGCTTCTGCTGTGCCTTCTTTaGTGTGTTCTGCCTCTTCTCCTGAGACTGCTGTTCCTTCAAGTT +
Preference number: 5 (lower is better)
Translates to: QVRFCCSQMLLLCLL*CVLPLLLRLLFLQV
Trigger: AACTTGAAGGAACAGCAGTCTCAGGAGAAGAGGCAGAACACACCAAAGAAGGCACAGCAGAAGCATTTGTGAACAGCAAAAACGCACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS GCA 90 bp CTTTCTCTTCTTTGCTACTTGGGCCTTGGACCTTTAATTCATTTCTaGTATCTCCCTTTCCAGGGAGCTGCATTAGGGAAAGCTGGTCAG +
Preference number: 5 (lower is better)
Translates to: LSLLCYLGLGPLIHF*YLPFQGAALGKAGQ
Trigger: CTGACCAGCTTTCCCTAATGCAGCTCCCTGGAAAGGGAGATAGCAGAAATGAATTAAAGGTCCAAGGCCCAAGTAGCAAAGAAGAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS GCA 90 bp GATTGGGAGAGAAATTGGGGGCATGTTGAGATGATAATGATTCATTaGTTTGTGGTGCTTGCCTCCCTTTGTAGTACCAGCCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: DWERNWGHVEMIMIH*FVVLASLCSTSLSL
Trigger: GAGAGAGAGGCTGGTACTACAAAGGGAGGCAAGCACCACAAAGCAATGAATCATTATCATCTCAACATGCCCCCAATTTCTCTCCCAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 90 bp GTTTCAGCTCTCTGCCAGTCAGTGTTGCCCCGTTACTGTCCTCACTaGCATATTTGTGGAATGTCTCAATTACACAGAGGACATTTCTCA +
Preference number: 5 (lower is better)
Translates to: VSALCQSVLPRYCPH*HICGMSQLHRGHFS
Trigger: TGAGAAATGTCCTCTGTGTAATTGAGACATTCCACAAATATGCCAGTGAGGACAGTAACGGGGCAACACTGACTGGCAGAGAGCTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 90 bp TTCAGATGCTTCTCCTGGAAAGTTGTGAGTCTTGGCTTCTCTCCATaGGTCCACTCTGTTATTTCCAACTGCTCCACTTTCTTCAGGGAT +
Preference number: 5 (lower is better)
Translates to: FRCFSWKVVSLGFSP*VHSVISNCSTFFRD
Trigger: ATCCCTGAAGAAAGTGGAGCAGTTGGAAATAACAGAGTGGACCCATGGAGAGAAGCCAAGACTCACAACTTTCCAGGAGAAGCATCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 90 bp TTCTCCAAACTGGTCTCTTATCTTGGAAACACTTTGCTCTCTGGCTaGTTCATCTCCTTCCTGGGAGATCTCCTTATCTTGTCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: FSKLVSYLGNTLLSG*FISFLGDLLILSLP
Trigger: AGGAAGGGACAAGATAAGGAGATCTCCCAGGAAGGAGATGAACCAGCCAGAGAGCAAAGTGTTTCCAAGATAAGAGACCAGTTTGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 90 bp GGTGGTGAACTTTGGGTTGCCAAGTTTCCTTCCTGTTCTCCAAACTaGTCTCTTATCTTGGAAACACTTTGCTCTCTGGCTGGTTCATCT +
Preference number: 5 (lower is better)
Translates to: GGELWVAKFPSCSPN*SLILETLCSLAGSS
Trigger: AGATGAACCAGCCAGAGAGCAAAGTGTTTCCAAGATAAGAGACCAGTTTGGAGAACAGGAAGGAAACTTGGCAACCCAAAGTTCACCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGCTCTGCCAGTCAGTGTaGCCCCGTTACTGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQELCQSV*PRYCPH
Trigger: GTGAGGACAGTAACGGGGCAACACTGACTGGCAGAG...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS TCA 90 bp ATGGGTCCACTCTGTTATTTCCAACTGCTCCACTTTCTTCAGGGATaGGCTGAGATGATGATGCCATTCCTGAAGGAAGCATCCTCTTTT +
Preference number: 5 (lower is better)
Translates to: MGPLCYFQLLHFLQG*AEMMMPFLKEASSF
Trigger: AAAAGAGGATGCTTCCTTCAGGAATGGCATCATCATCTCAGCTCATCCCTGAAGAAAGTGGAGCAGTTGGAAATAACAGAGTGGACCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 90 bp CATCCTTTCCTGGTTCTTGAGTGTCAAACATTCTACAGACATCCTTaGAATCAGTTGATTTCTGTGTCTGAGATGGTGACCTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: HPFLVLECQTFYRHP*NQLISVSEMVTWQQ
Trigger: CTGCTGCCAGGTCACCATCTCAGACACAGAAATCAACTGATTCCAAGGATGTCTGTAGAATGTTTGACACTCAAGAACCAGGAAAGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGGTCTCTGAGCTGCTATaGCCTTCCTCTGAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQEVSELL*PSSEAR
Trigger: CCTGGCTTCAGAGGAAGGCAATAGCAGCTCAGAGAC...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCTCCATGTTGGTCCCCTaGACTCTGGGAGTCCCCTTG +
Preference number: 5 (lower is better)
Translates to: HLEVALFGRSFTDCICLLSMLVP*TLGVPL
Trigger: CAAGGGGACTCCCAGAGTCAAGGGGACCAACATGGA...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGCACAGACTCTCCATGTaGGTCCCCTTGACTCTGGGA +
Preference number: 5 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQEHRLSM*VPLTLG
Trigger: TCCCAGAGTCAAGGGGACCAACATGGAGAGTCTGTG...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS TCA 90 bp AACTTCCTGATCTTCACATGGTCTTTGTGTTGCTTCTTTTGGTGGTaGACTTTGGGTTGCCAAGTTTCCTTCCTGTTCTCCAAACTGGTC +
Preference number: 5 (lower is better)
Translates to: NFLIFTWSLCCFFWW*TLGCQVSFLFSKLV
Trigger: GACCAGTTTGGAGAACAGGAAGGAAACTTGGCAACCCAAAGTTCACCACCAAAAGAAGCAACACAAAGACCATGTGAAGATCAGGAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTCTCGCCCTGGATGAGTaGTTTCAGCTCTCTGCCAGT +
Preference number: 5 (lower is better)
Translates to: EVALFGRSFTDCICLLRCLALDE*FQLSAS
Trigger: ACTGGCAGAGAGCTGAAACAACTCATCCAGGGCGAG...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGGACCATCTCCGGTGGTaGCCTGAACATCCACATCAT +
Preference number: 5 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQEDHLRW*PEHPHH
Trigger: ATGATGTGGATGTTCAGGCAACCACCGGAGATGGTC...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGCTCCTCCTCAACTGGTaGGTCATGAGTCTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQELLLNW*VMSLGD
Trigger: GTCACCAAGACTCATGACCAACCAGTTGAGGAGGAG...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGCTTGGCTGGACTTTTTaGGTCACCACCTTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQELGWTF*VTTFSC
Trigger: GCAGGAGAAGGTGGTGACCAAAAAAGTCCAGCCAAG...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS TCA 90 bp TATTTGTGGAATGTCTCAATTACACAGAGGACATTTCTCAGGAGCTaGGGCATCTTTACAAACTCAGGAGAGGCTAGTTCACAAGCGAGA +
Preference number: 5 (lower is better)
Translates to: YLWNVSITQRTFLRS*GIFTNSGEASSQAR
Trigger: TCTCGCTTGTGAACTAGCCTCTCCTGAGTTTGTAAAGATGCCTCAGCTCCTGAGAAATGTCCTCTGTGTAATTGAGACATTCCACAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS TCA 90 bp TTGTTCTTAGGATCATTGTGTTCAGATGCTTCTCCTGGAAAGTTGTaGGTCTTGGCTTCTCTCCATGGGTCCACTCTGTTATTTCCAACT +
Preference number: 5 (lower is better)
Translates to: LFLGSLCSDASPGKL*VLASLHGSTLLFPT
Trigger: AGTTGGAAATAACAGAGTGGACCCATGGAGAGAAGCCAAGACTCACAACTTTCCAGGAGAAGCATCTGAACACAATGATCCTAAGAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 90 bp TGTTCTGCCATAATCCTCAGGTTCACCCAAATTCTTTGTTTTAGCTaGTGTCTGGTCAGCATCCTTTCCTGGTTCTTGAGTGTCAAACAT +
Preference number: 5 (lower is better)
Translates to: CSAIILRFTQILCFS*CLVSILSWFLSVKH
Trigger: ATGTTTGACACTCAAGAACCAGGAAAGGATGCTGACCAGACACCAGCTAAAACAAAGAATTTGGGTGAACCTGAGGATTATGGCAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTGGAGATCTCCTTATCTaGTCCCTTCCTCTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: EVALFGRSFTDCICLLRCGDLLI*SLPLCG
Trigger: CCCACAGAGAGGAAGGGACAAGATAAGGAGATCTCC...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTCACAGAACAGGGCTCTaGGTCTCTCTGCATCTGCTT +
Preference number: 5 (lower is better)
Translates to: EVALFGRSFTDCICLLRCHRTGL*VSLHLL
Trigger: AAGCAGATGCAGAGAGACCAAGAGCCCTGTTCTGTG...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAATCTCTGAGGGTGACCTaGCTTATCTTCCAAGGCCTG +
Preference number: 5 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQSLRVT*LIFQGL
Trigger: CAGGCCTTGGAAGATAAGCAAGGTCACCCTCAGAGA...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 90 bp ACCCAAATTCTTTGTTTTAGCTGGTGTCTGGTCAGCATCCTTTCCTaGTTCTTGAGTGTCAAACATTCTACAGACATCCTTGGAATCAGT +
Preference number: 5 (lower is better)
Translates to: TQILCFSWCLVSILS*FLSVKHSTDILGIS
Trigger: ACTGATTCCAAGGATGTCTGTAGAATGTTTGACACTCAAGAACCAGGAAAGGATGCTGACCAGACACCAGCTAAAACAAAGAATTTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 90 bp TCTGAATGTGTACACGTGAGTATTGAGGGTGATTGGGAGAGAAATTaGGGGCATGTTGAGATGATAATGATTCATTGCTTTGTGGTGCTT +
Preference number: 5 (lower is better)
Translates to: SECVHVSIEGDWERN*GHVEMIMIHCFVVL
Trigger: AAGCACCACAAAGCAATGAATCATTATCATCTCAACATGCCCCCAATTTCTCTCCCAATCACCCTCAATACTCACGTGTACACATTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGTCCTCTTTTCTTGAGTaGGTGAAGTTCCCACTGTCC +
Preference number: 5 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQESSFLE*VKFPLS
Trigger: GGACAGTGGGAACTTCACCAACTCAAGAAAAGAGGA...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAAGCCACTTCCTGACTTaGTTCATCTCCTTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQSHFLT*FISFQV
Trigger: CACCTGGAAGGAGATGAACAAAGTCAGGAAGTGGCT...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGGTGGTGAACTTTGGGTaGCCAAGTTTCCTTCCTGTT +
Preference number: 5 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQEVVNFG*PSFLPV
Trigger: AACAGGAAGGAAACTTGGCAACCCAAAGTTCACCAC...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAATCTGCTGTGCCTTCTTaGGTGTGTTCTGCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQSAVPS*VCSASS
Trigger: AGAAGAGGCAGAACACACCAAAGAAGGCACAGCAGA...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTTTTGGTCCCTGGGCCTaGATTCTTGTGTTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: EVALFGRSFTDCICLLRCFGPWA*ILVFSS
Trigger: AGAGGAGAACACAAGAATCAAGGCCCAGGGACCAAA...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAACAGGGGACTGAAGAATaGTGCTCTTTCTTGGCTGGA +
Preference number: 5 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQQGTEE*CSFLAG
Trigger: TCCAGCCAAGAAAGAGCACAATTCTTCAGTCCCCTG...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS TCA 90 bp CTTCCTCCTCTGATGTTACAGGTTCCTTTGTTTCAAGTTGTATCTTaGGGGAGGCTGAATTGTCCTCATCTAGACTTTCTAACAGAGTAT +
Preference number: 5 (lower is better)
Translates to: LPPLMLQVPLFQVVS*GRLNCPHLDFLTEY
Trigger: ATACTCTGTTAGAAAGTCTAGATGAGGACAATTCAGCCTCCCTCAAGATACAACTTGAAACAAAGGAACCTGTAACATCAGAGGAGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 90 bp TCATCTCTCATGTCAGATGTTTCTGAACCATTTCTGCTACCATATTaGACTGGCAGGTCCTTTGTTTCACATTCTTTTTCTTGGGTCTCA +
Preference number: 5 (lower is better)
Translates to: SSLMSDVSEPFLLPY*TGRSFVSHSFSWVS
Trigger: TGAGACCCAAGAAAAAGAATGTGAAACAAAGGACCTGCCAGTCCAATATGGTAGCAGAAATGGTTCAGAAACATCTGACATGAGAGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGCACATGGTCTTTGTGTaGCTTCTTTTGGTGGTGAAC +
Preference number: 5 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQEHMVFV*LLLVVN
Trigger: GTTCACCACCAAAAGAAGCAACACAAAGACCATGTG...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGATTTCTGCTACCATATaGGACTGGCAGGTCCTTTGT +
Preference number: 5 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQEISATI*DWQVLC
Trigger: ACAAAGGACCTGCCAGTCCAATATGGTAGCAGAAAT...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGTTGAGGGAGGCTGAATaGTCCTCATCTAGACTTTCT +
Preference number: 5 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQELREAE*SSSRLS
Trigger: AGAAAGTCTAGATGAGGACAATTCAGCCTCCCTCAA...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTATTGCTTTGTGGTGCTaGCCTCCCTTTGTAGTACCA +
Preference number: 5 (lower is better)
Translates to: EVALFGRSFTDCICLLRCIALWC*PPFVVP
Trigger: TGGTACTACAAAGGGAGGCAAGCACCACAAAGCAAT...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCTATCTTGGAAACACTTaGCTCTCTGGCTGGTTCATC +
Preference number: 5 (lower is better)
Translates to: HLEVALFGRSFTDCICLLYLGNT*LSGWFI
Trigger: GATGAACCAGCCAGAGAGCAAAGTGTTTCCAAGATA...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGAACTGGTCTCTTATCTaGGAAACACTTTGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQENWSLI*ETLCSL
Trigger: CAGAGAGCAAAGTGTTTCCAAGATAAGAGACCAGTT...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAATTATTGTGACCTCCTaGCACAGACTCTCCATGTTG +
Preference number: 5 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQIIVTS*HRLSML
Trigger: CAACATGGAGAGTCTGTGCAAGGAGGTCACAATAAT...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGTTTCAAGTTGTATCTaGAGGGAGGCTGAATTGTCC +
Preference number: 5 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQVSSCI*REAELS
Trigger: GGACAATTCAGCCTCCCTCAAGATACAACTTGAAAC...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTTCTGCTTTTCAAGACTaGACCAGGGGACTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: EVALFGRSFTDCICLLRCSAFQD*TRGLKN
Trigger: ATTCTTCAGTCCCCTGGTCAAGTCTTGAAAAGCAGA...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGAGACTCACTGGATGGTaGGTTACAAGAGCTTCTTAT +
Preference number: 5 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQERLTGW*VTRASY
Trigger: ATAAGAAGCTCTTGTAACCAACCATCCAGTGAGTCT...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS GCA 90 bp TCTCTTTCCTTTCATCTCTCATGTCAGATGTTTCTGAACCATTTCTaGTACCATATTGGACTGGCAGGTCCTTTGTTTCACATTCTTTTT +
Preference number: 5 (lower is better)
Translates to: SLSFHLSCQMFLNHF*YHIGLAGPLFHILF
Trigger: AAAAAGAATGTGAAACAAAGGACCTGCCAGTCCAATATGGTAGCAGAAATGGTTCAGAAACATCTGACATGAGAGATGAAAGGAAAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGTCCTCACTGGCATATTaGTGGAATGTCTCAATTACA +
Preference number: 5 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQESSLAY*WNVSIT
Trigger: TGTAATTGAGACATTCCACAAATATGCCAGTGAGGA...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCTCTCCTTCCAGGTGTTaGTTCTTAGGATCATTGTGT +
Preference number: 5 (lower is better)
Translates to: HLEVALFGRSFTDCICLLSPSRC*FLGSLC
Trigger: ACACAATGATCCTAAGAACAAACACCTGGAAGGAGA...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGTGTTGTTTGTATATCTaGAGCCACTTCCTGACTTTG +
Preference number: 5 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQECCLYI*SHFLTL
Trigger: CAAAGTCAGGAAGTGGCTCAAGATATACAAACAACA...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCGGACTGGCAGGTCCTTaGTTTCACATTCTTTTTCTT +
Preference number: 5 (lower is better)
Translates to: HLEVALFGRSFTDCICLLGLAGP*FHILFL
Trigger: AAGAAAAAGAATGTGAAACAAAGGACCTGCCAGTCC...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTTCTCTTCTTTGCTACTaGGGCCTTGGACCTTTAATT +
Preference number: 5 (lower is better)
Translates to: EVALFGRSFTDCICLLRCSLLCY*GLGPLI
Trigger: AATTAAAGGTCCAAGGCCCAAGTAGCAAAGAAGAGA...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCTTGGGTTACATTTGTTaGCTGCAGTATCTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: HLEVALFGRSFTDCICLLLGYIC*LQYLLL
Trigger: CAGGAGAAGATACTGCAGCAAACAAATGTAACCCAA...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAACCTCTTGGGTTACATTaGTTTGCTGCAGTATCTTCT +
Preference number: 5 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQPLGLH*FAAVSS
Trigger: AGAAGATACTGCAGCAAACAAATGTAACCCAAGAGG...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAATATCTGAACTTGCTTTaGATGCTCCTCTTGGGTTAC +
Preference number: 5 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQYLNLL*MLLLGY
Trigger: GTAACCCAAGAGGAGCATCAAAAGCAAGTTCAGATA...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTGATGATAATGATTCATaGCTTTGTGGTGCTTGCCTC +
Preference number: 5 (lower is better)
Translates to: EVALFGRSFTDCICLLRCDDNDS*LCGACL
Trigger: GAGGCAAGCACCACAAAGCAATGAATCATTATCATC...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCATCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAAGCCCATTTTGGCATTaGGAAGTAGCATTGTTTGGT +
Preference number: 5 (lower is better)
Translates to: SSNHIGKHLVDSLDGWLQSPFWH*EVALFG
Trigger: ACCAAACAATGCTACTTCCAAATGCCAAAATGGGCT...TTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp TCAAACCATATAGGTAAACACTTAGTAGACTCACTGGATGGTTGGTTACAAGAGATTGTCTTCTGTTGTTaGTATATCTTGAGCCACTTC +
Preference number: 5 (lower is better)
Translates to: SNHIGKHLVDSLDGWLQEIVFCC*YILSHF
Trigger: GAAGTGGCTCAAGATATACAAACAACAGAAGACAAT...CTCTTGTAACCAACCATCCAGTGAGTCTACTAAGTGTTTACCTATATGGTTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCATCCTTTCCTGGTTCTaGAGTGTCAAACATTCTACA +
Preference number: 5 (lower is better)
Translates to: HLEVALFGRSFTDCICLLILSWF*SVKHST
Trigger: TGTAGAATGTTTGACACTCAAGAACCAGGAAAGGAT...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCATGACAAAGCCCATTTaGGCATTTGGAAGTAGCATT +
Preference number: 5 (lower is better)
Translates to: HLEVALFGRSFTDCICLLMTKPI*AFGSSI
Trigger: AATGCTACTTCCAAATGCCAAAATGGGCTTTGTCAT...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTAATTCAATGAATCAGTaGGAAAAACTGGCACCTGCT +
Preference number: 5 (lower is better)
Translates to: EVALFGRSFTDCICLLRCNSMNQ*EKLAPA
Trigger: AGCAGGTGCCAGTTTTTCCAACTGATTCATTGAATT...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCCAGAGGTTCAACAAGTaGAAGATTGCAAGAACAAAT +
Preference number: 5 (lower is better)
Translates to: HLEVALFGRSFTDCICLLQRFNK*KIARTN
Trigger: ATTTGTTCTTGCAATCTTCAACTTGTTGAACCTCTG...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp GAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCAGATGTCTTCATTGTCTTCTGTaGTTTGTATATCTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: EVALFGRSFTDCICLLRCLHCLL*FVYLEP
Trigger: TGGCTCAAGATATACAAACAACAGAAGACAATGAAG...ACATCTGAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS-3UTR CAA 90 bp CATTTGGAAGTAGCATTGTTTGGTAGGAGTTTTACTGACTGTATTTGTTTGCTCCAGCATCTTTTGATTTaGATAATCCTTGGAGTTCCT +
Preference number: 5 (lower is better)
Translates to: HLEVALFGRSFTDCICLLQHLLI*IILGVP
Trigger: AGGAACTCCAAGGATTATCAAAATCAAAAGATGCTG...GAGCAAACAAATACAGTCAGTAAAACTCCTACCAAACAATGCTACTTCCAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS GCA 72 bp AGTCCCCTTGCACAGGCAGTTCACCTGTCTCTGAGCTaGTATTGCCTTCCTCTGAAGCCAGGCTGTTGGGAG +
Preference number: 6 (lower is better)
Translates to: SPLAQAVHLSLS*YCLPLKPGCWE
Trigger: CTCCCAACAGCCTGGCTTCAGAGGAAGGCAATAGCAGCTCAGAGACAGGTGAACTGCCTGTGCAAGGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 90 bp AGGTGTTCCCTGCCTCTGGGTATCTGGGTTATTATTGTGACCTCCTaGCACAGACTCTCCATGTTGGTCCCCTTGACTCTGGGAGTCCCC +
Preference number: 6 (lower is better)
Translates to: RCSLPLGIWVIIVTS*HRLSMLVPLTLGVP
Trigger: GGGGACTCCCAGAGTCAAGGGGACCAACATGGAGAGTCTGTGCAAGGAGGTCACAATAATAACCCAGATACCCAGAGGCAGGGAACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS TCA 72 bp AGTTTCAGAAGACCCCTCATCACTCTGTGTGAATGGTaGCTCAGGGTCCTCCCCCTGGTAACCATCCTCCTC +
Preference number: 6 (lower is better)
Translates to: SFRRPLITLCEW*LRVLPLVTILL
Trigger: GAGGAGGATGGTTACCAGGGGGAGGACCCTGAGTCACCATTCACACAGAGTGATGAGGGGTCTTCTGAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS GCA 72 bp GAGCTGTACATCCTCTCCTCTGACTGCTGGTACCACTaGCTCCAGAGCTCTGTTTTTCTCACCAGGTGTTCC +
Preference number: 6 (lower is better)
Translates to: ELYILSSDCWYH*LQSSVFLTRCS
Trigger: GGAACACCTGGTGAGAAAAACAGAGCTCTGGAGGCAGTGGTACCAGCAGTCAGAGGAGAGGATGTACAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 90 bp GGTATCTGGGTTATTATTGTGACCTCCTTGCACAGACTCTCCATGTaGGTCCCCTTGACTCTGGGAGTCCCCTTGCACAGGCAGTTCACC +
Preference number: 6 (lower is better)
Translates to: GIWVIIVTSLHRLSM*VPLTLGVPLHRQFT
Trigger: GGTGAACTGCCTGTGCAAGGGGACTCCCAGAGTCAAGGGGACCAACATGGAGAGTCTGTGCAAGGAGGTCACAATAATAACCCAGATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS TCA 72 bp CTCACTGGTGAGGGATACACTGCAAAGCTCTGGGCCTaGTGCCTGGGCTATCTGAACTTGCTTTTGATGCTC +
Preference number: 6 (lower is better)
Translates to: LTGEGYTAKLWA*CLGYLNLLLML
Trigger: GAGCATCAAAAGCAAGTTCAGATAGCCCAGGCATCAGGCCCAGAGCTTTGCAGTGTATCCCTCACCAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 72 bp AGGGTCCTCCCCCTGGTAACCATCCTCCTCCTCAACTaGTTGGTCATGAGTCTTGGTGACCCTAGTATTTTC +
Preference number: 6 (lower is better)
Translates to: RVLPLVTILLLN*LVMSLGDPSIF
Trigger: GAAAATACTAGGGTCACCAAGACTCATGACCAACCAGTTGAGGAGGAGGATGGTTACCAGGGGGAGGACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 72 bp CTATCTCCCTTTCCAGGGAGCTGCATTAGGGAAAGCTaGTCAGTGAAGTCTTCATCCAGGGCACCTGTGATC +
Preference number: 6 (lower is better)
Translates to: LSPFPGSCIRES*SVKSSSRAPVI
Trigger: GATCACAGGTGCCCTGGATGAAGACTTCACTGACCAGCTTTCCCTAATGCAGCTCCCTGGAAAGGGAGATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 72 bp GTCCTCCCCCTGGTAACCATCCTCCTCCTCAACTGGTaGGTCATGAGTCTTGGTGACCCTAGTATTTTCTCC +
Preference number: 6 (lower is better)
Translates to: VLPLVTILLLNW*VMSLGDPSIFS
Trigger: GGAGAAAATACTAGGGTCACCAAGACTCATGACCAACCAGTTGAGGAGGAGGATGGTTACCAGGGGGAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 72 bp GTTATTATTGTGACCTCCTTGCACAGACTCTCCATGTaGGTCCCCTTGACTCTGGGAGTCCCCTTGCACAGG +
Preference number: 6 (lower is better)
Translates to: VIIVTSLHRLSM*VPLTLGVPLHR
Trigger: CCTGTGCAAGGGGACTCCCAGAGTCAAGGGGACCAACATGGAGAGTCTGTGCAAGGAGGTCACAATAATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 72 bp TTGGTGAAGTTCCCACTGTCCACTGACCATCTCCGGTaGTTGCCTGAACATCCACATCATCTAGCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: LVKFPLSTDHLR*LPEHPHHLASP
Trigger: AGGAGAAGCTAGATGATGTGGATGTTCAGGCAACCACCGGAGATGGTCAGTGGACAGTGGGAACTTCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 72 bp GCAGTATCTTCTCCTGTAGGTACTGGTATAGTGGACTaGAATAGACTGCACCCCTCTCCACAGAACAGGGCT +
Preference number: 6 (lower is better)
Translates to: AVSSPVGTGIVD*NRLHPSPQNRA
Trigger: AGCCCTGTTCTGTGGAGAGGGGTGCAGTCTATTCCAGTCCACTATACCAGTACCTACAGGAGAAGATACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 72 bp GTGAAGTTCCCACTGTCCACTGACCATCTCCGGTGGTaGCCTGAACATCCACATCATCTAGCTTCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: VKFPLSTDHLRW*PEHPHHLASPS
Trigger: AGAAGGAGAAGCTAGATGATGTGGATGTTCAGGCAACCACCGGAGATGGTCAGTGGACAGTGGGAACTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 72 bp CTGCCTCTGGGTATCTGGGTTATTATTGTGACCTCCTaGCACAGACTCTCCATGTTGGTCCCCTTGACTCTG +
Preference number: 6 (lower is better)
Translates to: LPLGIWVIIVTS*HRLSMLVPLTL
Trigger: CAGAGTCAAGGGGACCAACATGGAGAGTCTGTGCAAGGAGGTCACAATAATAACCCAGATACCCAGAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 90 bp GAGATGATGATGCCATTCCTGAAGGAAGCATCCTCTTTTCTTGAGTaGGTGAAGTTCCCACTGTCCACTGACCATCTCCGGTGGTTGCCT +
Preference number: 6 (lower is better)
Translates to: EMMMPFLKEASSFLE*VKFPLSTDHLRWLP
Trigger: AGGCAACCACCGGAGATGGTCAGTGGACAGTGGGAACTTCACCAACTCAAGAAAAGAGGATGCTTCCTTCAGGAATGGCATCATCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS TCA 72 bp CTACAGACATCCTTGGAATCAGTTGATTTCTGTGTCTaGGATGGTGACCTGGCAGCAGCTTGTTCTGGCAGG +
Preference number: 6 (lower is better)
Translates to: LQTSLESVDFCV*DGDLAAACSGR
Trigger: CCTGCCAGAACAAGCTGCTGCCAGGTCACCATCTCAGACACAGAAATCAACTGATTCCAAGGATGTCTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS GCA 72 bp CTGGATGAGTTGTTTCAGCTCTCTGCCAGTCAGTGTTaGCCCGTTACTGTCCTCACTGGCATATTTGTGGAA +
Preference number: 6 (lower is better)
Translates to: LDELFQLSASQC*PVTVLTGIFVE
Trigger: TTCCACAAATATGCCAGTGAGGACAGTAACGGGGCAACACTGACTGGCAGAGAGCTGAAACAACTCATCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 72 bp GAAACACTTTGCTCTCTGGCTGGTTCATCTCCTTCCTaGGAGATCTCCTTATCTTGTCCCTTCCTCTCTGTG +
Preference number: 6 (lower is better)
Translates to: ETLCSLAGSSPS*EISLSCPFLSV
Trigger: CACAGAGAGGAAGGGACAAGATAAGGAGATCTCCCAGGAAGGAGATGAACCAGCCAGAGAGCAAAGTGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 72 bp GTTTTTCTCACCAGGTGTTCCCTGCCTCTGGGTATCTaGGTTATTATTGTGACCTCCTTGCACAGACTCTCC +
Preference number: 6 (lower is better)
Translates to: VFLTRCSLPLGI*VIIVTSLHRLS
Trigger: GGAGAGTCTGTGCAAGGAGGTCACAATAATAACCCAGATACCCAGAGGCAGGGAACACCTGGTGAGAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 72 bp ATGCCATTCCTGAAGGAAGCATCCTCTTTTCTTGAGTaGGTGAAGTTCCCACTGTCCACTGACCATCTCCGG +
Preference number: 6 (lower is better)
Translates to: MPFLKEASSFLE*VKFPLSTDHLR
Trigger: CCGGAGATGGTCAGTGGACAGTGGGAACTTCACCAACTCAAGAAAAGAGGATGCTTCCTTCAGGAATGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 90 bp TGGGTTGCCAAGTTTCCTTCCTGTTCTCCAAACTGGTCTCTTATCTaGGAAACACTTTGCTCTCTGGCTGGTTCATCTCCTTCCTGGGAG +
Preference number: 6 (lower is better)
Translates to: WVAKFPSCSPNWSLI*ETLCSLAGSSPSWE
Trigger: CTCCCAGGAAGGAGATGAACCAGCCAGAGAGCAAAGTGTTTCCAAGATAAGAGACCAGTTTGGAGAACAGGAAGGAAACTTGGCAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 90 bp GCAGGTGCGTTTTTGCTGTTCACAAATGCTTCTGCTGTGCCTTCTTaGGTGTGTTCTGCCTCTTCTCCTGAGACTGCTGTTCCTTCAAGT +
Preference number: 6 (lower is better)
Translates to: AGAFLLFTNASAVPS*VCSASSPETAVPSS
Trigger: ACTTGAAGGAACAGCAGTCTCAGGAGAAGAGGCAGAACACACCAAAGAAGGCACAGCAGAAGCATTTGTGAACAGCAAAAACGCACCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 90 bp CTACAGACTGCTTCTCAAGTGGTGCTAAATCTTGTGTTCTTTCTCTaGCCCCCAGTGTCCTTTCTGCTGCAGGTGCGTTTTTGCTGTTCA +
Preference number: 6 (lower is better)
Translates to: LQTASQVVLNLVFFL*PPVSFLLQVRFCCS
Trigger: TGAACAGCAAAAACGCACCTGCAGCAGAAAGGACACTGGGGGCAAGAGAAAGAACACAAGATTTAGCACCACTTGAGAAGCAGTCTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 90 bp GTTTCCTTCCTGTTCTCCAAACTGGTCTCTTATCTTGGAAACACTTaGCTCTCTGGCTGGTTCATCTCCTTCCTGGGAGATCTCCTTATC +
Preference number: 6 (lower is better)
Translates to: VSFLFSKLVSYLGNT*LSGWFISFLGDLLI
Trigger: GATAAGGAGATCTCCCAGGAAGGAGATGAACCAGCCAGAGAGCAAAGTGTTTCCAAGATAAGAGACCAGTTTGGAGAACAGGAAGGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS TCA 72 bp GGATCATTGTGTTCAGATGCTTCTCCTGGAAAGTTGTaGGTCTTGGCTTCTCTCCATGGGTCCACTCTGTTA +
Preference number: 6 (lower is better)
Translates to: GSLCSDASPGKL*VLASLHGSTLL
Trigger: TAACAGAGTGGACCCATGGAGAGAAGCCAAGACTCACAACTTTCCAGGAGAAGCATCTGAACACAATGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 90 bp CTGGTTCTTGAGTGTCAAACATTCTACAGACATCCTTGGAATCAGTaGATTTCTGTGTCTGAGATGGTGACCTGGCAGCAGCTTGTTCTG +
Preference number: 6 (lower is better)
Translates to: LVLECQTFYRHPWNQ*ISVSEMVTWQQLVL
Trigger: CAGAACAAGCTGCTGCCAGGTCACCATCTCAGACACAGAAATCAACTGATTCCAAGGATGTCTGTAGAATGTTTGACACTCAAGAACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 90 bp CCTGGGCTATCTGAACTTGCTTTTGATGCTCCTCTTGGGTTACATTaGTTTGCTGCAGTATCTTCTCCTGTAGGTACTGGTATAGTGGAC +
Preference number: 6 (lower is better)
Translates to: PGLSELAFDAPLGLH*FAAVSSPVGTGIVD
Trigger: GTCCACTATACCAGTACCTACAGGAGAAGATACTGCAGCAAACAAATGTAACCCAAGAGGAGCATCAAAAGCAAGTTCAGATAGCCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS TCA 72 bp TTATTTCCAACTGCTCCACTTTCTTCAGGGATGAGCTaGGATGATGATGCCATTCCTGAAGGAAGCATCCTC +
Preference number: 6 (lower is better)
Translates to: LFPTAPLSSGMS*DDDAIPEGSIL
Trigger: GAGGATGCTTCCTTCAGGAATGGCATCATCATCTCAGCTCATCCCTGAAGAAAGTGGAGCAGTTGGAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS TCA 72 bp CTCTGTTATTTCCAACTGCTCCACTTTCTTCAGGGATaGGCTGAGATGATGATGCCATTCCTGAAGGAAGCA +
Preference number: 6 (lower is better)
Translates to: LCYFQLLHFLQG*AEMMMPFLKEA
Trigger: TGCTTCCTTCAGGAATGGCATCATCATCTCAGCTCATCCCTGAAGAAAGTGGAGCAGTTGGAAATAACAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 72 bp AGTGTTGCCCCGTTACTGTCCTCACTGGCATATTTGTaGAATGTCTCAATTACACAGAGGACATTTCTCAGG +
Preference number: 6 (lower is better)
Translates to: SVAPLLSSLAYL*NVSITQRTFLR
Trigger: CCTGAGAAATGTCCTCTGTGTAATTGAGACATTCCACAAATATGCCAGTGAGGACAGTAACGGGGCAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 72 bp TGTGTTCAGATGCTTCTCCTGGAAAGTTGTGAGTCTTaGCTTCTCTCCATGGGTCCACTCTGTTATTTCCAA +
Preference number: 6 (lower is better)
Translates to: CVQMLLLESCES*LLSMGPLCYFQ
Trigger: TTGGAAATAACAGAGTGGACCCATGGAGAGAAGCCAAGACTCACAACTTTCCAGGAGAAGCATCTGAACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 72 bp CAAACTGGTCTCTTATCTTGGAAACACTTTGCTCTCTaGCTGGTTCATCTCCTTCCTGGGAGATCTCCTTAT +
Preference number: 6 (lower is better)
Translates to: QTGLLSWKHFAL*LVHLLPGRSPY
Trigger: ATAAGGAGATCTCCCAGGAAGGAGATGAACCAGCCAGAGAGCAAAGTGTTTCCAAGATAAGAGACCAGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 72 bp GTCAGTGTTGCCCCGTTACTGTCCTCACTGGCATATTaGTGGAATGTCTCAATTACACAGAGGACATTTCTC +
Preference number: 6 (lower is better)
Translates to: VSVAPLLSSLAY*WNVSITQRTFL
Trigger: GAGAAATGTCCTCTGTGTAATTGAGACATTCCACAAATATGCCAGTGAGGACAGTAACGGGGCAACACTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS TCA 72 bp ATCTTCACATGGTCTTTGTGTTGCTTCTTTTGGTGGTaGACTTTGGGTTGCCAAGTTTCCTTCCTGTTCTCC +
Preference number: 6 (lower is better)
Translates to: IFTWSLCCFFWW*TLGCQVSFLFS
Trigger: GGAGAACAGGAAGGAAACTTGGCAACCCAAAGTTCACCACCAAAAGAAGCAACACAAAGACCATGTGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 72 bp TTTGTTCTTAGGATCATTGTGTTCAGATGCTTCTCCTaGAAAGTTGTGAGTCTTGGCTTCTCTCCATGGGTC +
Preference number: 6 (lower is better)
Translates to: FVLRIIVFRCFS*KVVSLGFSPWV
Trigger: GACCCATGGAGAGAAGCCAAGACTCACAACTTTCCAGGAGAAGCATCTGAACACAATGATCCTAAGAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 72 bp AGTTTCCTTCCTGTTCTCCAAACTGGTCTCTTATCTTaGAAACACTTTGCTCTCTGGCTGGTTCATCTCCTT +
Preference number: 6 (lower is better)
Translates to: SFLPVLQTGLLS*KHFALWLVHLL
Trigger: AAGGAGATGAACCAGCCAGAGAGCAAAGTGTTTCCAAGATAAGAGACCAGTTTGGAGAACAGGAAGGAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 72 bp AAGTTTCCTTCCTGTTCTCCAAACTGGTCTCTTATCTaGGAAACACTTTGCTCTCTGGCTGGTTCATCTCCT +
Preference number: 6 (lower is better)
Translates to: KFPSCSPNWSLI*ETLCSLAGSSP
Trigger: AGGAGATGAACCAGCCAGAGAGCAAAGTGTTTCCAAGATAAGAGACCAGTTTGGAGAACAGGAAGGAAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 90 bp GCTACCATATTGGACTGGCAGGTCCTTTGTTTCACATTCTTTTTCTaGGGTCTCAGATGTTCTGCCATAATCCTCAGGTTCACCCAAATT +
Preference number: 6 (lower is better)
Translates to: ATILDWQVLCFTFFF*GLRCSAIILRFTQI
Trigger: AATTTGGGTGAACCTGAGGATTATGGCAGAACATCTGAGACCCAAGAAAAAGAATGTGAAACAAAGGACCTGCCAGTCCAATATGGTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS TCA 72 bp ACTCTCATCAAGTGGAAGTCCCCTGGTATATGGTTGTaGTGCTTGGCTGTAGTTGAAAAAGACAGAACAATC +
Preference number: 6 (lower is better)
Translates to: TLIKWKSPGIWL*CLAVVEKDRTI
Trigger: GATTGTTCTGTCTTTTTCAACTACAGCCAAGCATCACAACCATATACCAGGGGACTTCCACTTGATGAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 72 bp CTGGTTCTTGAGTGTCAAACATTCTACAGACATCCTTaGAATCAGTTGATTTCTGTGTCTGAGATGGTGACC +
Preference number: 6 (lower is better)
Translates to: LVLECQTFYRHP*NQLISVSEMVT
Trigger: GGTCACCATCTCAGACACAGAAATCAACTGATTCCAAGGATGTCTGTAGAATGTTTGACACTCAAGAACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 72 bp CTTTGTTTTAGCTGGTGTCTGGTCAGCATCCTTTCCTaGTTCTTGAGTGTCAAACATTCTACAGACATCCTT +
Preference number: 6 (lower is better)
Translates to: LCFSWCLVSILS*FLSVKHSTDIL
Trigger: AAGGATGTCTGTAGAATGTTTGACACTCAAGAACCAGGAAAGGATGCTGACCAGACACCAGCTAAAACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 90 bp GTTACAGGTTCCTTTGTTTCAAGTTGTATCTTGAGGGAGGCTGAATaGTCCTCATCTAGACTTTCTAACAGAGTATTCTGGGCCTCTGTT +
Preference number: 6 (lower is better)
Translates to: VTGSFVSSCILREAE*SSSRLSNRVFWASV
Trigger: AACAGAGGCCCAGAATACTCTGTTAGAAAGTCTAGATGAGGACAATTCAGCCTCCCTCAAGATACAACTTGAAACAAAGGAACCTGTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS TCA 72 bp TCAGCATCTTTTGATTTTGATAATCCTTGGAGTTCCTaGTACTTCCCATCCTGTGTTTGGGTTTCCAGGACT +
Preference number: 6 (lower is better)
Translates to: SASFDFDNPWSS*YFPSCVWVSRT
Trigger: AGTCCTGGAAACCCAAACACAGGATGGGAAGTATCAGGAACTCCAAGGATTATCAAAATCAAAAGATGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS GCA 72 bp TTTCATCTCTCATGTCAGATGTTTCTGAACCATTTCTaGTACCATATTGGACTGGCAGGTCCTTTGTTTCAC +
Preference number: 6 (lower is better)
Translates to: FHLSCQMFLNHF*YHIGLAGPLFH
Trigger: GTGAAACAAAGGACCTGCCAGTCCAATATGGTAGCAGAAATGGTTCAGAAACATCTGACATGAGAGATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 90 bp TCTTCCTCCTCTGATGTTACAGGTTCCTTTGTTTCAAGTTGTATCTaGAGGGAGGCTGAATTGTCCTCATCTAGACTTTCTAACAGAGTA +
Preference number: 6 (lower is better)
Translates to: SSSSDVTGSFVSSCI*REAELSSSRLSNRV
Trigger: TACTCTGTTAGAAAGTCTAGATGAGGACAATTCAGCCTCCCTCAAGATACAACTTGAAACAAAGGAACCTGTAACATCAGAGGAGGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 90 bp CATTGGCTTATTTGTCTTAAGTTGGCCTTCATTGTCTTCTGTTGTTaGTATATCTTGAGCCACTTCCTGACTTTGTTCATCTCCTTCCAG +
Preference number: 6 (lower is better)
Translates to: HWLICLKLAFIVFCC*YILSHFLTLFISFQ
Trigger: CTGGAAGGAGATGAACAAAGTCAGGAAGTGGCTCAAGATATACAAACAACAGAAGACAATGAAGGCCAACTTAAGACAAATAAGCCAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 90 bp ATGTTTCTGAACCATTTCTGCTACCATATTGGACTGGCAGGTCCTTaGTTTCACATTCTTTTTCTTGGGTCTCAGATGTTCTGCCATAAT +
Preference number: 6 (lower is better)
Translates to: MFLNHFCYHIGLAGP*FHILFLGSQMFCHN
Trigger: ATTATGGCAGAACATCTGAGACCCAAGAAAAAGAATGTGAAACAAAGGACCTGCCAGTCCAATATGGTAGCAGAAATGGTTCAGAAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS TCA 72 bp CTGATGTTACAGGTTCCTTTGTTTCAAGTTGTATCTTaGGGGAGGCTGAATTGTCCTCATCTAGACTTTCTA +
Preference number: 6 (lower is better)
Translates to: LMLQVPLFQVVS*GRLNCPHLDFL
Trigger: TAGAAAGTCTAGATGAGGACAATTCAGCCTCCCTCAAGATACAACTTGAAACAAAGGAACCTGTAACATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 72 bp TCCTTTGTTTCAAGTTGTATCTTGAGGGAGGCTGAATaGTCCTCATCTAGACTTTCTAACAGAGTATTCTGG +
Preference number: 6 (lower is better)
Translates to: SFVSSCILREAE*SSSRLSNRVFW
Trigger: CCAGAATACTCTGTTAGAAAGTCTAGATGAGGACAATTCAGCCTCCCTCAAGATACAACTTGAAACAAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 72 bp TCTGATGTTACAGGTTCCTTTGTTTCAAGTTGTATCTaGAGGGAGGCTGAATTGTCCTCATCTAGACTTTCT +
Preference number: 6 (lower is better)
Translates to: SDVTGSFVSSCI*REAELSSSRLS
Trigger: AGAAAGTCTAGATGAGGACAATTCAGCCTCCCTCAAGATACAACTTGAAACAAAGGAACCTGTAACATCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 90 bp ATTTGTCTTAAGTTGGCCTTCATTGTCTTCTGTTGTTTGTATATCTaGAGCCACTTCCTGACTTTGTTCATCTCCTTCCAGGTGTTTGTT +
Preference number: 6 (lower is better)
Translates to: ICLKLAFIVFCCLYI*SHFLTLFISFQVFV
Trigger: AACAAACACCTGGAAGGAGATGAACAAAGTCAGGAAGTGGCTCAAGATATACAAACAACAGAAGACAATGAAGGCCAACTTAAGACAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 90 bp CTTCTGAGCTTAGATATTGTGTCTCAGAACCTTTTTCAGCATCTTTaGATTTTGATAATCCTTGGAGTTCCTGATACTTCCCATCCTGTG +
Preference number: 6 (lower is better)
Translates to: LLSLDIVSQNLFQHL*ILIILGVPDTSHPV
Trigger: CACAGGATGGGAAGTATCAGGAACTCCAAGGATTATCAAAATCAAAAGATGCTGAAAAAGGTTCTGAGACACAATATCTAAGCTCAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CCA 72 bp ATGTCAGATGTTTCTGAACCATTTCTGCTACCATATTaGACTGGCAGGTCCTTTGTTTCACATTCTTTTTCT +
Preference number: 6 (lower is better)
Translates to: MSDVSEPFLLPY*TGRSFVSHSFS
Trigger: AGAAAAAGAATGTGAAACAAAGGACCTGCCAGTCCAATATGGTAGCAGAAATGGTTCAGAAACATCTGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368806.2
CDS CAA 72 bp ATTTGTCTTAAGTTGGCCTTCATTGTCTTCTGTTGTTaGTATATCTTGAGCCACTTCCTGACTTTGTTCATC +
Preference number: 6 (lower is better)
Translates to: ICLKLAFIVFCC*YILSHFLTLFI
Trigger: GATGAACAAAGTCAGGAAGTGGCTCAAGATATACAAACAACAGAAGACAATGAAGGCCAACTTAAGACAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368806.2