Pregenerated sensors for TCFL5 (Homo sapiens)
Ensembl gene IDs: ENSG00000101190Ensembl transcript IDs: ENST00000217162.5, ENST00000335351.8
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCACGCCCTTTTCGAGTCAGACTAGCCGAGCAGAGCTCCAGGGTTaGAGAAGGCGTGCACAGGTCACGAAGGAATGGCTGTTCACCCCC | + |
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Preference number: 1 (lower is better) Translates to: VTPFSSQTSRAELQG*RRRAQVTKEWLFTP Trigger: GGGGGTGAACAGCCATTCCTTCGTGACCTGTGCACGCCTTCTGCAACCCTGGAGCTCTGCTCGGCTAGTCTGACTCGAAAAGGGCGTGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| 3UTR TCA 90 bp | TTTACAAAATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTaGGTCACGCCCTTTTCGAGTCAGACTAGCCGAGCAGAGCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: FTKCALKVPTGVPSA*VTPFSSQTSRAELQ Trigger: CTGGAGCTCTGCTCGGCTAGTCTGACTCGAAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATTTTGTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| 3UTR TCA 90 bp | CACACAGGTTTAAAATGGTCCTGCACGTTGCAATACAGCAGCACGTaGCTCAGAGTCATGACAAGGGGGTGTGATATAACGAATGAAATA | + |
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Preference number: 1 (lower is better) Translates to: HTGLKWSCTLQYSST*LRVMTRGCDITNEI Trigger: TATTTCATTCGTTATATCACACCCCCTTGTCATGACTCTGAGTCACGTGCTGCTGTATTGCAACGTGCAGGACCATTTTAAACCTGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| 3UTR-3UTR GCA 90 bp | TTTAAAATGGTCCTGCACGTTGCAATACAGCAGCACGTGACTCAGAGTCATGACTATTTTTACAAAATGTaGTCTCAAAGTCCCTACTGG | + |
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Preference number: 2 (lower is better) Translates to: FKMVLHVAIQQHVTQSHDYFYKM*SQSPYW Trigger: CCAGTAGGGACTTTGAGAGCACATTTTGTAAAAATA...GTCATGACTCTGAGTCACGTGCTGCTGTATTGCAACGTGCAGGACCATTTTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| 3UTR-3UTR GCA 90 bp | GATGTTTTGTGTACAAACTCACATCTCCAATTAACAGTATTTATTGAGGGTGACAATGGTCCTGCACGTTaGAATACAGCAGCACGTGAC | + |
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Preference number: 2 (lower is better) Translates to: DVLCTNSHLQLTVFIEGDNGPAR*NTAARD Trigger: GTCACGTGCTGCTGTATTGCAACGTGCAGGACCATT...GTCACCCTCAATAAATACTGTTAATTGGAGATGTGAGTTTGTACACAAAACATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| 3UTR-3UTR TCA 90 bp | GATGTTTTGTGTACAAACTCACATCTCCAATTAACAGTATTTATTGAGGGTGACTGCTATTACCTGTTGTaGTTGATAAGTAAAGCCACT | + |
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Preference number: 2 (lower is better) Translates to: DVLCTNSHLQLTVFIEGDCYYLL*LISKAT Trigger: AGTGGCTTTACTTATCAATCACAACAGGTAATAGCA...GTCACCCTCAATAAATACTGTTAATTGGAGATGTGAGTTTGTACACAAAACATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| 3UTR-3UTR CCA 90 bp | GATGTTTTGTGTACAAACTCACATCTCCAATTAACAGTATTTATTGAGGGTGACGTAATGAATGACTCTTaGTATGAAAACGTGGCATTT | + |
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Preference number: 2 (lower is better) Translates to: DVLCTNSHLQLTVFIEGDVMNDS*YENVAF Trigger: AAATGCCACGTTTTCATACCAAGAGTCATTCATTAC...GTCACCCTCAATAAATACTGTTAATTGGAGATGTGAGTTTGTACACAAAACATC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| 3UTR-3UTR CAA 90 bp | AAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTTTTCGAGTCAGACTAAGCAGAGCTCCAGGGTaGCAGAAGGCGTGCACAGGT | + |
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Preference number: 3 (lower is better) Translates to: KSLLESRQLESRPFRVRLSRAPG*QKACTG Trigger: ACCTGTGCACGCCTTCTGCAACCCTGGAGCTCTGCT...TAGTCTGACTCGAAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| 3UTR GCA 72 bp | TTTTCGAGTCAGACTAGCCGAGCAGAGCTCCAGGGTTaGAGAAGGCGTGCACAGGTCACGAAGGAATGGCTG | + |
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Preference number: 3 (lower is better) Translates to: FSSQTSRAELQG*RRRAQVTKEWL Trigger: CAGCCATTCCTTCGTGACCTGTGCACGCCTTCTGCAACCCTGGAGCTCTGCTCGGCTAGTCTGACTCGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| 3UTR TCA 72 bp | TGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTaGGTCACGCCCTTTTCGAGTCAGACTAGCCGAGCA | + |
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Preference number: 3 (lower is better) Translates to: CALKVPTGVPSA*VTPFSSQTSRA Trigger: TGCTCGGCTAGTCTGACTCGAAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| 3UTR TCA 72 bp | TTAAAATGGTCCTGCACGTTGCAATACAGCAGCACGTaGCTCAGAGTCATGACAAGGGGGTGTGATATAACG | + |
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Preference number: 3 (lower is better) Translates to: LKWSCTLQYSST*LRVMTRGCDIT Trigger: CGTTATATCACACCCCCTTGTCATGACTCTGAGTCACGTGCTGCTGTATTGCAACGTGCAGGACCATTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR GCA 90 bp | GTCACGCCCTTTTCGAGTCAGACTAGCCGAGCAGAGCTCCAGGGTTGCAGAAGGGCCCGAGCACTACTCTaGGCCGGCCACAGCCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: VTPFSSQTSRAELQGCRRARALL*AGHSRR Trigger: GCGCCGGCTGTGGCCGGCGCAGAGTAGTGCTCGGGC...CCTTCTGCAACCCTGGAGCTCTGCTCGGCTAGTCTGACTCGAAAAGGGCGTGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CCA 90 bp | CAAAATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTCCCTGGGGCCCACTCTaGGCCTGCTCCCCCAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: QNVLSKSLLESRQLESRPPWGPL*ACSPRF Trigger: AAACCTGGGGGAGCAGGCCCAGAGTGGGCCCCAGGG...AGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR TCA 90 bp | AATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTTTTCGGCGGGGATGCTGTTaGAGCGGTCCTCCAGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: NVLSKSLLESRQLESRPFRRGCC*SGPPGG Trigger: TCCGCCTGGAGGACCGCTTCAACAGCATCCCCGCCG...AAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR GCA 90 bp | GTCACGCCCTTTTCGAGTCAGACTAGCCGAGCAGAGCTCCAGGGTTGCAGAAGGTGCGAGCAGAGGATGTaGTGCAGCTGCGTGTACTCC | + |
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Preference number: 4 (lower is better) Translates to: VTPFSSQTSRAELQGCRRCEQRM*CSCVYS Trigger: GGAGTACACGCAGCTGCAGCACATCCTCTGCTCGCA...CCTTCTGCAACCCTGGAGCTCTGCTCGGCTAGTCTGACTCGAAAAGGGCGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR TCA 90 bp | AAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTTTTCGAGTCAGACTAGAGTTACCAAATTGTTaGGCGCCCCGCCCGGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: KSLLESRQLESRPFRVRLELPNC*APRPAR Trigger: CCGAGCCGGGCGGGGCGCTCAACAATTTGGTAACTC...TAGTCTGACTCGAAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR GCA 90 bp | GTCACGCCCTTTTCGAGTCAGACTAGCCGAGCAGAGCTCCAGGGTTGCAGAAGGCGCTTAGCAGCATCATaGGCAGCTCCTGGAAGTCGA | + |
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Preference number: 4 (lower is better) Translates to: VTPFSSQTSRAELQGCRRRLAAS*AAPGSR Trigger: TCGACTTCCAGGAGCTGCGCATGATGCTGCTAAGCG...CCTTCTGCAACCCTGGAGCTCTGCTCGGCTAGTCTGACTCGAAAAGGGCGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR GCA 90 bp | AATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTTTTGGCCCACTCTGGGCCTaGTCCCCCAGGTTTGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: NVLSKSLLESRQLESRPFGPLWA*SPRFAC Trigger: ACAGGCAAACCTGGGGGAGCAGGCCCAGAGTGGGCC...AAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CCA 90 bp | AATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTTTTTCCTGGAAGTCGATGTaGCCCAGGCAGGGCGCGTCG | + |
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Preference number: 4 (lower is better) Translates to: NVLSKSLLESRQLESRPFSWKSM*PRQGAS Trigger: CGACGCGCCCTGCCTGGGCCACATCGACTTCCAGGA...AAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR TCA 90 bp | TTTAAAATGGTCCTGCACGTTGCAATACAGCAGCACGTGACTCAGAGTCATGACCCAGCAGCGCCGAGTTaGGGCGCGTCTCGAGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: FKMVLHVAIQQHVTQSHDPAAPS*GASRAR Trigger: GCGAGCTCGAGACGCGCCTCAACTCGGCGCTGCTGG...GTCATGACTCTGAGTCACGTGCTGCTGTATTGCAACGTGCAGGACCATTTTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR GCA 90 bp | AATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTTTTGAGGACTCCGAGGACTaGCAAGCGCCTTGTGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: NVLSKSLLESRQLESRPFEDSED*QAPCVA Trigger: CGCCACACAAGGCGCTTGGCAGTCCTCGGAGTCCTC...AAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CCA 90 bp | TTACAAAATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCGCCAAGCGCCTTGTGTaGCGGTGGCACCTTCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LQNVLSKSLLESRQLESRAKRLV*RWHLRP Trigger: TGGGCGAAGGTGCCACCGCCACACAAGGCGCTTGGC...GCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATTTTGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR TCA 90 bp | TTTAAAATGGTCCTGCACGTTGCAATACAGCAGCACGTGACTCAGAGTCATGACTCAGGTCGGTGGTCGTaGAGCTCAGCCCCGGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: FKMVLHVAIQQHVTQSHDSGRWS*SSAPAR Trigger: GCGAGCCGGGGCTGAGCTTCACGACCACCGACCTGA...GTCATGACTCTGAGTCACGTGCTGCTGTATTGCAACGTGCAGGACCATTTTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR TCA 90 bp | CAAAATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTGGAGTCCCGTCAGCTTaGGTCACGCCCTTTTCGAGT | + |
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Preference number: 4 (lower is better) Translates to: QNVLSKSLLESRQLESRPGVPSA*VTPFSS Trigger: ACTCGAAAAGGGCGTGACTCAAGCTGACGGGACTCC...AGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR GCA 90 bp | AATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTTTTGCAGAGCTCCAGGGTTaGAGAAGGCGTGCACAGGTC | + |
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Preference number: 4 (lower is better) Translates to: NVLSKSLLESRQLESRPFAELQG*RRRAQV Trigger: GACCTGTGCACGCCTTCTGCAACCCTGGAGCTCTGC...AAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CCA 90 bp | AATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTTTTCGCCTTGTGTGGCGGTaGCACCTTCGCCCACATTCT | + |
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Preference number: 4 (lower is better) Translates to: NVLSKSLLESRQLESRPFRLVWR*HLRPHS Trigger: AGAATGTGGGCGAAGGTGCCACCGCCACACAAGGCG...AAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR TCA 90 bp | AAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTTTTCGAGTCAGACTATTCAGTCCGATCACTTaGTCTCCATCGAGGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: KSLLESRQLESRPFRVRLFSPIT*SPSRGC Trigger: GCAGCCCCTCGATGGAGATCAAGTGATCGGACTGAA...TAGTCTGACTCGAAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR GCA 90 bp | AATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTTTTGAGCAGAGGATGTGCTaGAGCTGCGTGTACTCCACC | + |
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Preference number: 4 (lower is better) Translates to: NVLSKSLLESRQLESRPFEQRMC*SCVYST Trigger: GGTGGAGTACACGCAGCTGCAGCACATCCTCTGCTC...AAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR TCA 90 bp | GTCACGCCCTTTTCGAGTCAGACTAGCCGAGCAGAGCTCCAGGGTTGCAGAAGGACATTTGTGTCCAACTaGCGCATTCTACTCCGATTC | + |
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Preference number: 4 (lower is better) Translates to: VTPFSSQTSRAELQGCRRTFVSN*RILLRF Trigger: GAATCGGAGTAGAATGCGTCAGTTGGACACAAATGT...CCTTCTGCAACCCTGGAGCTCTGCTCGGCTAGTCTGACTCGAAAAGGGCGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR TCA 90 bp | TTTAAAATGGTCCTGCACGTTGCAATACAGCAGCACGTGACTCAGAGTCATGACTGCCTCTCCCTACGTTaGGACCTTCCTCCCTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: FKMVLHVAIQQHVTQSHDCLSLR*DLPPWG Trigger: GCCCCAGGGAGGAAGGTCTCAACGTAGGGAGAGGCA...GTCATGACTCTGAGTCACGTGCTGCTGTATTGCAACGTGCAGGACCATTTTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR GCA 90 bp | AATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTTTTTCTCCATCGAGGGGCTaGTCTGTAAACTCCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: NVLSKSLLESRQLESRPFSPSRG*SVNSPV Trigger: CACAGGGGAGTTTACAGAGCAGCCCCTCGATGGAGA...AAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR GCA 90 bp | GTCACGCCCTTTTCGAGTCAGACTAGCCGAGCAGAGCTCCAGGGTTGCAGAAGGGGTTTAAAATGGTCCTaGACGTTGCAATACAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: VTPFSSQTSRAELQGCRRGLKWS*TLQYSS Trigger: GCTGCTGTATTGCAACGTGCAGGACCATTTTAAACC...CCTTCTGCAACCCTGGAGCTCTGCTCGGCTAGTCTGACTCGAAAAGGGCGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CCA 90 bp | TTACAAAATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCATCATGCGCAGCTCCTaGAAGTCGATGTGGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LQNVLSKSLLESRQLESRIMRSS*KSMWPR Trigger: CCTGGGCCACATCGACTTCCAGGAGCTGCGCATGAT...GCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATTTTGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CCA 90 bp | TTACAAAATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCAAGGAGTCCGGTCTaGTCAGCTTTAGCCTTCGGC | + |
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Preference number: 4 (lower is better) Translates to: LQNVLSKSLLESRQLESRPRSPV*SALAFG Trigger: GCCGAAGGCTAAAGCTGACCAGACCGGACTCCTTGG...GCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATTTTGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR GCA 90 bp | GTCACGCCCTTTTCGAGTCAGACTAGCCGAGCAGAGCTCCAGGGTTGCAGAAGGAATCCAATATCCTGGTaGTTGGCAGCTTCAAGTACA | + |
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Preference number: 4 (lower is better) Translates to: VTPFSSQTSRAELQGCRRNPISW*LAASST Trigger: TGTACTTGAAGCTGCCAAGCACCAGGATATTGGATT...CCTTCTGCAACCCTGGAGCTCTGCTCGGCTAGTCTGACTCGAAAAGGGCGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CCA 90 bp | GTCACGCCCTTTTCGAGTCAGACTAGCCGAGCAGAGCTCCAGGGTTGCAGAAGGCACACAGGTTTAAAATaGTCCTGCACGTTGCAATAC | + |
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Preference number: 4 (lower is better) Translates to: VTPFSSQTSRAELQGCRRHTGLK*SCTLQY Trigger: GTATTGCAACGTGCAGGACCATTTTAAACCTGTGTG...CCTTCTGCAACCCTGGAGCTCTGCTCGGCTAGTCTGACTCGAAAAGGGCGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR GCA 90 bp | GTCACGCCCTTTTCGAGTCAGACTAGCCGAGCAGAGCTCCAGGGTTGCAGAAGGAGTGGGTATGTAAATTaGAAAGCAGTAGTTGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: VTPFSSQTSRAELQGCRRSGYVN*KAVVVA Trigger: GGCTACAACTACTGCTTTGCAATTTACATACCCACT...CCTTCTGCAACCCTGGAGCTCTGCTCGGCTAGTCTGACTCGAAAAGGGCGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR GCA 90 bp | AAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTTTTCGAGTCAGACTATCTTCAGTGCTTGTTTaGATAGCGCTGCTTCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: KSLLESRQLESRPFRVRLSSVLV*IALLLP Trigger: TGGGAGAAGCAGCGCTATGCAAACAAGCACTGAAGA...TAGTCTGACTCGAAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR GCA 90 bp | AATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTTTTAATGGTCCTGCACGTTaGAATACAGCAGCACGTGAC | + |
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Preference number: 4 (lower is better) Translates to: NVLSKSLLESRQLESRPFNGPAR*NTAARD Trigger: GTCACGTGCTGCTGTATTGCAACGTGCAGGACCATT...AAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CCA 90 bp | CAAAATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTGGCAATCCAATATCCTaGTGCTTGGCAGCTTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: QNVLSKSLLESRQLESRPGNPIS*CLAASS Trigger: ACTTGAAGCTGCCAAGCACCAGGATATTGGATTGCC...AGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CCA 90 bp | AAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTTTTCGAGTCAGACTAATTTCAGGAATGCTGTaGTCCACTGCAGAGTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: KSLLESRQLESRPFRVRLISGML*STAELW Trigger: CCACAACTCTGCAGTGGACCACAGCATTCCTGAAAT...TAGTCTGACTCGAAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR TCA 90 bp | GTCACGCCCTTTTCGAGTCAGACTAGCCGAGCAGAGCTCCAGGGTTGCAGAAGGTGCTATTACCTGTTGTaGTTGATAAGTAAAGCCACT | + |
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Preference number: 4 (lower is better) Translates to: VTPFSSQTSRAELQGCRRCYYLL*LISKAT Trigger: AGTGGCTTTACTTATCAATCACAACAGGTAATAGCA...CCTTCTGCAACCCTGGAGCTCTGCTCGGCTAGTCTGACTCGAAAAGGGCGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR GCA 90 bp | AATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTTTTTGTCAGTCTCGGCATTaGAGAACGGCACTAAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: NVLSKSLLESRQLESRPFCQSRH*RTALRD Trigger: ATCTCTTAGTGCCGTTCTGCAATGCCGAGACTGACA...AAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR GCA 90 bp | TTACAAAATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCAATGCTGTGGTCCACTaGAGAGTTGTGGCCTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: LQNVLSKSLLESRQLESRNAVVH*RVVALS Trigger: TGACAAGGCCACAACTCTGCAGTGGACCACAGCATT...GCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATTTTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR TCA 90 bp | TTTAAAATGGTCCTGCACGTTGCAATACAGCAGCACGTGACTCAGAGTCATGACCCTTCGCCCACATTCTaGATCTCTCCAAGGGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: FKMVLHVAIQQHVTQSHDPSPTF*ISPRAL Trigger: AAGAGCCCTTGGAGAGATTCAGAATGTGGGCGAAGG...GTCATGACTCTGAGTCACGTGCTGCTGTATTGCAACGTGCAGGACCATTTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR GCA 90 bp | GTCACGCCCTTTTCGAGTCAGACTAGCCGAGCAGAGCTCCAGGGTTGCAGAAGGTATTTTTACAAAATGTaGTCTCAAAGTCCCTACTGG | + |
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Preference number: 4 (lower is better) Translates to: VTPFSSQTSRAELQGCRRYFYKM*SQSPYW Trigger: CCAGTAGGGACTTTGAGAGCACATTTTGTAAAAATA...CCTTCTGCAACCCTGGAGCTCTGCTCGGCTAGTCTGACTCGAAAAGGGCGTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CCA 90 bp | TTTAAAATGGTCCTGCACGTTGCAATACAGCAGCACGTGACTCAGAGTCATGACTCCACTGCAGAGTTGTaGCCTTGTCAGTCTCGGCAT | + |
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Preference number: 4 (lower is better) Translates to: FKMVLHVAIQQHVTQSHDSTAEL*PCQSRH Trigger: ATGCCGAGACTGACAAGGCCACAACTCTGCAGTGGA...GTCATGACTCTGAGTCACGTGCTGCTGTATTGCAACGTGCAGGACCATTTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CCA 90 bp | GTCACGCCCTTTTCGAGTCAGACTAGCCGAGCAGAGCTCCAGGGTTGCAGAAGGGTAATGAATGACTCTTaGTATGAAAACGTGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: VTPFSSQTSRAELQGCRRVMNDS*YENVAF Trigger: AAATGCCACGTTTTCATACCAAGAGTCATTCATTAC...CCTTCTGCAACCCTGGAGCTCTGCTCGGCTAGTCTGACTCGAAAAGGGCGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CCA 90 bp | TTACAAAATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCAATATCCTGGTGCTTaGCAGCTTCAAGTACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LQNVLSKSLLESRQLESRQYPGA*QLQVQN Trigger: GTTCTGTACTTGAAGCTGCCAAGCACCAGGATATTG...GCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATTTTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CCA 90 bp | TTTAAAATGGTCCTGCACGTTGCAATACAGCAGCACGTGACTCAGAGTCATGACTCTCAAAGTCCCTACTaGAGTCCCGTCAGCTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FKMVLHVAIQQHVTQSHDSQSPY*SPVSLS Trigger: ACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGA...GTCATGACTCTGAGTCACGTGCTGCTGTATTGCAACGTGCAGGACCATTTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CCA 90 bp | TTACAAAATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCGGCTTCATCCCCAAATaGTCTAAGAGGACATTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LQNVLSKSLLESRQLESRGFIPK*SKRTFM Trigger: CATGAATGTCCTCTTAGACCATTTGGGGATGAAGCC...GCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATTTTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR TCA 90 bp | CAAAATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTAGAACTCTGTGTCTGTaGAAGATTAGAATTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: QNVLSKSLLESRQLESRPRTLCL*KIRIST Trigger: AGTGGAAATTCTAATCTTTCACAGACACAGAGTTCT...AGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR TCA 90 bp | GATGTTTTGTGTACAAACTCACATCTCCAATTAACAGTATTTATTGAGGGTGACCCCCAGGTTTGCCTGTaGGGACTCCGAGGACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DVLCTNSHLQLTVFIEGDPQVCL*GLRGLP Trigger: TGGCAGTCCTCGGAGTCCTCACAGGCAAACCTGGGG...GTCACCCTCAATAAATACTGTTAATTGGAGATGTGAGTTTGTACACAAAACATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR GCA 90 bp | CAAAATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTAGGGTGACTTTGTATTaGACTAACGTCTATTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: QNVLSKSLLESRQLESRPRVTLY*TNVYCY Trigger: ATAGCAATAGACGTTAGTGCAATACAAAGTCACCCT...AGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR TCA 90 bp | AATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTTTTTTCAAGTACAGAACATaGGTTACTAGAACTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NVLSKSLLESRQLESRPFFKYRT*VTRTLC Trigger: ACACAGAGTTCTAGTAACTCATGTTCTGTACTTGAA...AAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR TCA 90 bp | AATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTTTTTTTAAGCGTCTACTGTaGCAGTATTTCATTTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NVLSKSLLESRQLESRPFFKRLL*QYFICG Trigger: TCCACAAATGAAATACTGTCACAGTAGACGCTTAAA...AAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATT 46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR GCA 90 bp | TTTAAAATGGTCCTGCACGTTGCAATACAGCAGCACGTGACTCAGAGTCATGACGATGTATTTCAGGAATaGTGTGGTCCACTGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FKMVLHVAIQQHVTQSHDDVFQE*CGPLQS Trigger: ACTCTGCAGTGGACCACAGCATTCCTGAAATACATC...GTCATGACTCTGAGTCACGTGCTGCTGTATTGCAACGTGCAGGACCATTTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CCA 90 bp | TTACAAAATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCTTGGTATGAAAACGTaGCATTTAAGCGTCTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LQNVLSKSLLESRQLESRLGMKT*HLSVYC Trigger: ACAGTAGACGCTTAAATGCCACGTTTTCATACCAAG...GCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATTTTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR TCA 90 bp | GATGTTTTGTGTACAAACTCACATCTCCAATTAACAGTATTTATTGAGGGTGACCAATACAGCAGCACGTaGCTCAGAGTCATGACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DVLCTNSHLQLTVFIEGDQYSST*LRVMTR Trigger: CCTTGTCATGACTCTGAGTCACGTGCTGCTGTATTG...GTCACCCTCAATAAATACTGTTAATTGGAGATGTGAGTTTGTACACAAAACATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR GCA 90 bp | GATGTTTTGTGTACAAACTCACATCTCCAATTAACAGTATTTATTGAGGGTGACACTCATCACAGCAAATaGGGATTCTGCGCCTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: DVLCTNSHLQLTVFIEGDTHHSK*GFCAFY Trigger: ATAGAAGGCGCAGAATCCGCATTTGCTGTGATGAGT...GTCACCCTCAATAAATACTGTTAATTGGAGATGTGAGTTTGTACACAAAACATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR TCA 90 bp | GATGTTTTGTGTACAAACTCACATCTCCAATTAACAGTATTTATTGAGGGTGACAGTAAAGCCACTCATTaGAAAACCCAATTCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: DVLCTNSHLQLTVFIEGDSKATH*KTQFQT Trigger: TGTTTGGAATTGGGTTTTTCAATGAGTGGCTTTACT...GTCACCCTCAATAAATACTGTTAATTGGAGATGTGAGTTTGTACACAAAACATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR TCA 90 bp | GATGTTTTGTGTACAAACTCACATCTCCAATTAACAGTATTTATTGAGGGTGACTACAAAGGTCTAGTCTaGTGTTTTGTGTACAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: DVLCTNSHLQLTVFIEGDYKGLV*CFVYKL Trigger: GAGTTTGTACACAAAACATCAGACTAGACCTTTGTA...GTCACCCTCAATAAATACTGTTAATTGGAGATGTGAGTTTGTACACAAAACATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS CCA 90 bp | CCCGCCTCGCTTAGCAGCATCATGCGCAGCTCCTGGAAGTCGATGTaGCCCAGGCAGGGCGCGTCGGCCGCCAGCGCGGACGGGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: PASLSSIMRSSWKSM*PRQGASAASADGHS Trigger: GCTGTGCCCGTCCGCGCTGGCGGCCGACGCGCCCTGCCTGGGCCACATCGACTTCCAGGAGCTGCGCATGATGCTGCTAAGCGAGGCGGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS CCA 90 bp | TTCTCCGCCGCGCCCGCCTCGCTTAGCAGCATCATGCGCAGCTCCTaGAAGTCGATGTGGCCCAGGCAGGGCGCGTCGGCCGCCAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: FSAAPASLSSIMRSS*KSMWPRQGASAASA Trigger: CGCGCTGGCGGCCGACGCGCCCTGCCTGGGCCACATCGACTTCCAGGAGCTGCGCATGATGCTGCTAAGCGAGGCGGGCGCGGCGGAGAA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS GCA 90 bp | CGCCCGACGTCTTCTCCGCCGCGCCCGCCTCGCTTAGCAGCATCATaGGCAGCTCCTGGAAGTCGATGTGGCCCAGGCAGGGCGCGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RPTSSPPRPPRLAAS*AAPGSRCGPGRARR Trigger: CCGACGCGCCCTGCCTGGGCCACATCGACTTCCAGGAGCTGCGCATGATGCTGCTAAGCGAGGCGGGCGCGGCGGAGAAGACGTCGGGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS-3UTR CAA 90 bp | GTCACGCCCTTTTCGAGTCAGACTAGCCGAGCAGAGCTCCAGGGTTGCAGAAGGTCGGCGGGGATGCTGTaGAAGCGGTCCTCCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VTPFSSQTSRAELQGCRRSAGML*KRSSRR Trigger: CCGCCTGGAGGACCGCTTCAACAGCATCCCCGCCGA...CCTTCTGCAACCCTGGAGCTCTGCTCGGCTAGTCTGACTCGAAAAGGGCGTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS CCA 90 bp | CCAGGTTTGCCTGTGAGGACTCCGAGGACTGCCAAGCGCCTTGTGTaGCGGTGGCACCTTCGCCCACATTCTGAATCTCTCCAAGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PGLPVRTPRTAKRLV*RWHLRPHSESLQGL Trigger: GAGCCCTTGGAGAGATTCAGAATGTGGGCGAAGGTGCCACCGCCACACAAGGCGCTTGGCAGTCCTCGGAGTCCTCACAGGCAAACCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS CCA 90 bp | TTGCCTGTGAGGACTCCGAGGACTGCCAAGCGCCTTGTGTGGCGGTaGCACCTTCGCCCACATTCTGAATCTCTCCAAGGGCTCTTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LPVRTPRTAKRLVWR*HLRPHSESLQGLFA Trigger: AGCGAAGAGCCCTTGGAGAGATTCAGAATGTGGGCGAAGGTGCCACCGCCACACAAGGCGCTTGGCAGTCCTCGGAGTCCTCACAGGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS-3UTR CAA 90 bp | AATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTTTTACAGCCGGCGCGCCGTaGGGGGAGGGAAAACCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NVLSKSLLESRQLESRPFTAGAP*GEGKPL Trigger: CAGCGGTTTTCCCTCCCCCAACGGCGCGCCGGCTGT...AAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CAA 90 bp | AAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTTTTCGAGTCAGACTAGGACTGCCAAGCGCCTaGTGTGGCGGTGGCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KSLLESRQLESRPFRVRLGLPSA*CGGGTF Trigger: GAAGGTGCCACCGCCACACAAGGCGCTTGGCAGTCC...TAGTCTGACTCGAAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CAA 90 bp | AAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTTTTCGAGTCAGACTACCTGCTCCCCCAGGTTaGCCTGTGAGGACTCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KSLLESRQLESRPFRVRLPAPPG*PVRTPR Trigger: CCTCGGAGTCCTCACAGGCAAACCTGGGGGAGCAGG...TAGTCTGACTCGAAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CAA 90 bp | TTTAAAATGGTCCTGCACGTTGCAATACAGCAGCACGTGACTCAGAGTCATGACGCCAGCAGCGCCGAGTaGAGGCGCGTCTCGAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: FKMVLHVAIQQHVTQSHDASSAE*RRVSSS Trigger: CGAGCTCGAGACGCGCCTCAACTCGGCGCTGCTGGC...GTCATGACTCTGAGTCACGTGCTGCTGTATTGCAACGTGCAGGACCATTTTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CAA 90 bp | AAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTTTTCGAGTCAGACTAAGAGTTACCAAATTGTaGAGCGCCCCGCCCGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: KSLLESRQLESRPFRVRLRVTKL*SAPPGS Trigger: CGAGCCGGGCGGGGCGCTCAACAATTTGGTAACTCT...TAGTCTGACTCGAAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CAA 90 bp | AAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTTTTCGAGTCAGACTAATGAGAGTTACCAAATaGTTGAGCGCCCCGCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: KSLLESRQLESRPFRVRLMRVTK*LSAPPG Trigger: GCCGGGCGGGGCGCTCAACAATTTGGTAACTCTCAT...TAGTCTGACTCGAAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CAA 90 bp | GTCACGCCCTTTTCGAGTCAGACTAGCCGAGCAGAGCTCCAGGGTTGCAGAAGGTTGTCAGTCTCGGCATaGCAGAACGGCACTAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VTPFSSQTSRAELQGCRRLSVSA*QNGTKR Trigger: TCTCTTAGTGCCGTTCTGCAATGCCGAGACTGACAA...CCTTCTGCAACCCTGGAGCTCTGCTCGGCTAGTCTGACTCGAAAAGGGCGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CAA 90 bp | GTCACGCCCTTTTCGAGTCAGACTAGCCGAGCAGAGCTCCAGGGTTGCAGAAGGCCAATATCCTGGTGCTaGGCAGCTTCAAGTACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VTPFSSQTSRAELQGCRRPISWC*AASSTE Trigger: TTCTGTACTTGAAGCTGCCAAGCACCAGGATATTGG...CCTTCTGCAACCCTGGAGCTCTGCTCGGCTAGTCTGACTCGAAAAGGGCGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CAA 90 bp | GTCACGCCCTTTTCGAGTCAGACTAGCCGAGCAGAGCTCCAGGGTTGCAGAAGGCTCTTCGCTCTACATTaGTGTCCAACTGACGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: VTPFSSQTSRAELQGCRRLFALH*CPTDAF Trigger: GAATGCGTCAGTTGGACACAAATGTAGAGCGAAGAG...CCTTCTGCAACCCTGGAGCTCTGCTCGGCTAGTCTGACTCGAAAAGGGCGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CAA 90 bp | CAAAATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTTGCAGAGTTGTGGCCTaGTCAGTCTCGGCATTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QNVLSKSLLESRQLESRPCRVVA*SVSALQ Trigger: CTGCAATGCCGAGACTGACAAGGCCACAACTCTGCA...AGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CAA 90 bp | AATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCCTTTTGTTCAGTCCGATCACTaGATCTCCATCGAGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NVLSKSLLESRQLESRPFVQSDH*ISIEGL Trigger: CAGCCCCTCGATGGAGATCAAGTGATCGGACTGAAC...AAAAGGGCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CAA 90 bp | TTTAAAATGGTCCTGCACGTTGCAATACAGCAGCACGTGACTCAGAGTCATGACATGCCTCTCCCTACGTaGAGACCTTCCTCCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: FKMVLHVAIQQHVTQSHDMPLPT*RPSSLG Trigger: CCCCAGGGAGGAAGGTCTCAACGTAGGGAGAGGCAT...GTCATGACTCTGAGTCACGTGCTGCTGTATTGCAACGTGCAGGACCATTTTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS GCA 90 bp | ATGCTGTGGTCCACTGCAGAGTTGTGGCCTTGTCAGTCTCGGCATTaGAGAACGGCACTAAGAGATTCAACTCATCACAGCAAATGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: MLWSTAELWPCQSRH*RTALRDSTHHSKCG Trigger: TCCGCATTTGCTGTGATGAGTTGAATCTCTTAGTGCCGTTCTGCAATGCCGAGACTGACAAGGCCACAACTCTGCAGTGGACCACAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS GCA 90 bp | TCTCCATGTCTTTCCTGGATGTATTTCAGGAATGCTGTGGTCCACTaGAGAGTTGTGGCCTTGTCAGTCTCGGCATTGCAGAACGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: SPCLSWMYFRNAVVH*RVVALSVSALQNGT Trigger: AGTGCCGTTCTGCAATGCCGAGACTGACAAGGCCACAACTCTGCAGTGGACCACAGCATTCCTGAAATACATCCAGGAAAGACATGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS-3UTR CAA 90 bp | TTACAAAATGTGCTCTCAAAGTCCCTACTGGAGTCCCGTCAGCTTGAGTCACGCCAGTGGGTATGTAAATaGCAAAGCAGTAGTTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LQNVLSKSLLESRQLESRQWVCK*QSSSCS Trigger: GCTACAACTACTGCTTTGCAATTTACATACCCACTG...GCGTGACTCAAGCTGACGGGACTCCAGTAGGGACTTTGAGAGCACATTTTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS-3UTR CAA 90 bp | GATGTTTTGTGTACAAACTCACATCTCCAATTAACAGTATTTATTGAGGGTGACTGGTCCACTGCAGAGTaGTGGCCTTGTCAGTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: DVLCTNSHLQLTVFIEGDWSTAE*WPCQSR Trigger: CCGAGACTGACAAGGCCACAACTCTGCAGTGGACCA...GTCACCCTCAATAAATACTGTTAATTGGAGATGTGAGTTTGTACACAAAACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS GCA 90 bp | CCACTAGTAGAGCAAGCATTTGTAGTAAACAGTGGGTATGTAAATTaGAAAGCAGTAGTTGTAGCCGCAGTTTTATTTTTCACTAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: PLVEQAFVVNSGYVN*KAVVVAAVLFFTNA Trigger: AGCATTAGTGAAAAATAAAACTGCGGCTACAACTACTGCTTTGCAATTTACATACCCACTGTTTACTACAAATGCTTGCTCTACTAGTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS CCA 90 bp | AAGATTAGAATTTCCACTAGTAGAGCAAGCATTTGTAGTAAACAGTaGGTATGTAAATTGCAAAGCAGTAGTTGTAGCCGCAGTTTTATT | + |
|
Preference number: 5 (lower is better) Translates to: KIRISTSRASICSKQ*VCKLQSSSCSRSFI Trigger: AATAAAACTGCGGCTACAACTACTGCTTTGCAATTTACATACCCACTGTTTACTACAAATGCTTGCTCTACTAGTGGAAATTCTAATCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS-3UTR CAA 90 bp | GATGTTTTGTGTACAAACTCACATCTCCAATTAACAGTATTTATTGAGGGTGACTTATTGAGGGTGACTTaGTATTGCACTAACGTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: DVLCTNSHLQLTVFIEGDLLRVT*YCTNVY Trigger: ATAGACGTTAGTGCAATACAAAGTCACCCTCAATAA...GTCACCCTCAATAAATACTGTTAATTGGAGATGTGAGTTTGTACACAAAACATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS TCA 72 bp | CCTCCGTCATCTCCACCAGGCTCAGGTCGGTGGTCGTaGAGCTCAGCCCCGGCTCGCCCAGCGCCGCGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PPSSPPGSGRWS*SSAPARPAPRP Trigger: GGGACGCGGCGCTGGGCGAGCCGGGGCTGAGCTTCACGACCACCGACCTGAGCCTGGTGGAGATGACGGAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS CCA 72 bp | GCGCCCGCCTCGCTTAGCAGCATCATGCGCAGCTCCTaGAAGTCGATGTGGCCCAGGCAGGGCGCGTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: APASLSSIMRSS*KSMWPRQGASA Trigger: GGCCGACGCGCCCTGCCTGGGCCACATCGACTTCCAGGAGCTGCGCATGATGCTGCTAAGCGAGGCGGGCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS GCA 72 bp | TCTTCTCCGCCGCGCCCGCCTCGCTTAGCAGCATCATaGGCAGCTCCTGGAAGTCGATGTGGCCCAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSPPRPPRLAAS*AAPGSRCGPGR Trigger: CCTGCCTGGGCCACATCGACTTCCAGGAGCTGCGCATGATGCTGCTAAGCGAGGCGGGCGCGGCGGAGAAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
||
| CDS GCA 72 bp | TGCTCCCCCAGGTTTGCCTGTGAGGACTCCGAGGACTaGCAAGCGCCTTGTGTGGCGGTGGCACCTTCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: CSPRFACEDSED*QAPCVAVAPSP Trigger: GGGCGAAGGTGCCACCGCCACACAAGGCGCTTGGCAGTCCTCGGAGTCCTCACAGGCAAACCTGGGGGAGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS GCA 72 bp | CCGTCAGCCGCCGCCTCCATGTGCGAGCAGAGGATGTaGTGCAGCTGCGTGTACTCCACCTCCGTCATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PSAAASMCEQRM*CSCVYSTSVIS Trigger: GGAGATGACGGAGGTGGAGTACACGCAGCTGCAGCACATCCTCTGCTCGCACATGGAGGCGGCGGCTGACGG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS GCA 72 bp | TCAGCCGCCGCCTCCATGTGCGAGCAGAGGATGTGCTaGAGCTGCGTGTACTCCACCTCCGTCATCTCCACC | + |
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Preference number: 6 (lower is better) Translates to: SAAASMCEQRMC*SCVYSTSVIST Trigger: GGTGGAGATGACGGAGGTGGAGTACACGCAGCTGCAGCACATCCTCTGCTCGCACATGGAGGCGGCGGCTGA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS CCA 72 bp | AGGACTCCGAGGACTGCCAAGCGCCTTGTGTGGCGGTaGCACCTTCGCCCACATTCTGAATCTCTCCAAGGG | + |
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Preference number: 6 (lower is better) Translates to: RTPRTAKRLVWR*HLRPHSESLQG Trigger: CCCTTGGAGAGATTCAGAATGTGGGCGAAGGTGCCACCGCCACACAAGGCGCTTGGCAGTCCTCGGAGTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS CCA 72 bp | CCTGTGAGGACTCCGAGGACTGCCAAGCGCCTTGTGTaGCGGTGGCACCTTCGCCCACATTCTGAATCTCTC | + |
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Preference number: 6 (lower is better) Translates to: PVRTPRTAKRLV*RWHLRPHSESL Trigger: GAGAGATTCAGAATGTGGGCGAAGGTGCCACCGCCACACAAGGCGCTTGGCAGTCCTCGGAGTCCTCACAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS TCA 72 bp | CTATCTCTTTCCATTCGGTTATGCCTCTCCCTACGTTaGGACCTTCCTCCCTGGGGCCCACTCTGGGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: LSLSIRLCLSLR*DLPPWGPLWAC Trigger: GCAGGCCCAGAGTGGGCCCCAGGGAGGAAGGTCTCAACGTAGGGAGAGGCATAACCGAATGGAAAGAGATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS TCA 72 bp | GCGCCTTGTGTGGCGGTGGCACCTTCGCCCACATTCTaGATCTCTCCAAGGGCTCTTCGCTCTACATTTGTG | + |
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Preference number: 6 (lower is better) Translates to: APCVAVAPSPTF*ISPRALRSTFV Trigger: CACAAATGTAGAGCGAAGAGCCCTTGGAGAGATTCAGAATGTGGGCGAAGGTGCCACCGCCACACAAGGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS CCA 72 bp | TCCCCTGTGCAGGACAGGTCACCAAGGAGTCCGGTCTaGTCAGCTTTAGCCTTCGGCCAGTTTTACCGCAAA | + |
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Preference number: 6 (lower is better) Translates to: SPVQDRSPRSPV*SALAFGQFYRK Trigger: TTTGCGGTAAAACTGGCCGAAGGCTAAAGCTGACCAGACCGGACTCCTTGGTGACCTGTCCTGCACAGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335351.8 |
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| CDS CAA 72 bp | TCTATCTCTTTCCATTCGGTTATGCCTCTCCCTACGTaGAGACCTTCCTCCCTGGGGCCCACTCTGGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SISFHSVMPLPT*RPSSLGPTLGL Trigger: CAGGCCCAGAGTGGGCCCCAGGGAGGAAGGTCTCAACGTAGGGAGAGGCATAACCGAATGGAAAGAGATAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS CAA 90 bp | AATGCTGTGGTCCACTGCAGAGTTGTGGCCTTGTCAGTCTCGGCATaGCAGAACGGCACTAAGAGATTCAACTCATCACAGCAAATGCGG | + |
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Preference number: 6 (lower is better) Translates to: NAVVHCRVVALSVSA*QNGTKRFNSSQQMR Trigger: CCGCATTTGCTGTGATGAGTTGAATCTCTTAGTGCCGTTCTGCAATGCCGAGACTGACAAGGCCACAACTCTGCAGTGGACCACAGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS GCA 72 bp | TCCACTGCAGAGTTGTGGCCTTGTCAGTCTCGGCATTaGAGAACGGCACTAAGAGATTCAACTCATCACAGC | + |
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Preference number: 6 (lower is better) Translates to: STAELWPCQSRH*RTALRDSTHHS Trigger: GCTGTGATGAGTTGAATCTCTTAGTGCCGTTCTGCAATGCCGAGACTGACAAGGCCACAACTCTGCAGTGGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS CAA 72 bp | GTCCACTGCAGAGTTGTGGCCTTGTCAGTCTCGGCATaGCAGAACGGCACTAAGAGATTCAACTCATCACAG | + |
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Preference number: 6 (lower is better) Translates to: VHCRVVALSVSA*QNGTKRFNSSQ Trigger: CTGTGATGAGTTGAATCTCTTAGTGCCGTTCTGCAATGCCGAGACTGACAAGGCCACAACTCTGCAGTGGAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS CAA 90 bp | CTTCGCCCACATTCTGAATCTCTCCAAGGGCTCTTCGCTCTACATTaGTGTCCAACTGACGCATTCTACTCCGATTCCTCTTCAGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: LRPHSESLQGLFALH*CPTDAFYSDSSSVL Trigger: AAGCACTGAAGAGGAATCGGAGTAGAATGCGTCAGTTGGACACAAATGTAGAGCGAAGAGCCCTTGGAGAGATTCAGAATGTGGGCGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS TCA 72 bp | TCTCCAAGGGCTCTTCGCTCTACATTTGTGTCCAACTaGCGCATTCTACTCCGATTCCTCTTCAGTGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: SPRALRSTFVSN*RILLRFLFSAC Trigger: ACAAGCACTGAAGAGGAATCGGAGTAGAATGCGTCAGTTGGACACAAATGTAGAGCGAAGAGCCCTTGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS CAA 72 bp | CATTCTGAATCTCTCCAAGGGCTCTTCGCTCTACATTaGTGTCCAACTGACGCATTCTACTCCGATTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: HSESLQGLFALH*CPTDAFYSDSS Trigger: AGAGGAATCGGAGTAGAATGCGTCAGTTGGACACAAATGTAGAGCGAAGAGCCCTTGGAGAGATTCAGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS GCA 72 bp | AGAACGGCACTAAGAGATTCAACTCATCACAGCAAATaGGGATTCTGCGCCTTCTATCTCTTTCCATTCGGT | + |
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Preference number: 6 (lower is better) Translates to: RTALRDSTHHSK*GFCAFYLFPFG Trigger: ACCGAATGGAAAGAGATAGAAGGCGCAGAATCCGCATTTGCTGTGATGAGTTGAATCTCTTAGTGCCGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS GCA 72 bp | TTGCATAGCGCTGCTTCTCCCACTTTAATCCAAACTTaGTCAGGCAAAACTTTGTTTCTACTACCTAACGTC | + |
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Preference number: 6 (lower is better) Translates to: LHSAASPTLIQT*SGKTLFLLPNV Trigger: GACGTTAGGTAGTAGAAACAAAGTTTTGCCTGAGCAAGTTTGGATTAAAGTGGGAGAAGCAGCGCTATGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS GCA 72 bp | GAGCAAGCATTTGTAGTAAACAGTGGGTATGTAAATTaGAAAGCAGTAGTTGTAGCCGCAGTTTTATTTTTC | + |
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Preference number: 6 (lower is better) Translates to: EQAFVVNSGYVN*KAVVVAAVLFF Trigger: GAAAAATAAAACTGCGGCTACAACTACTGCTTTGCAATTTACATACCCACTGTTTACTACAAATGCTTGCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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| CDS CAA 72 bp | AGAGCAAGCATTTGTAGTAAACAGTGGGTATGTAAATaGCAAAGCAGTAGTTGTAGCCGCAGTTTTATTTTT | + |
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Preference number: 6 (lower is better) Translates to: RASICSKQWVCK*QSSSCSRSFIF Trigger: AAAAATAAAACTGCGGCTACAACTACTGCTTTGCAATTTACATACCCACTGTTTACTACAAATGCTTGCTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000217162.5 ENST00000335351.8 |
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