RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TCF3 (Homo sapiens)

Ensembl gene IDs: ENSG00000071564

Ensembl transcript IDs: ENST00000262965.12, ENST00000344749.9, ENST00000453954.6, ENST00000585731.5, ENST00000586318.1, ENST00000587235.6, ENST00000587425.5, ENST00000588136.7, ENST00000590436.5, ENST00000590684.5, ENST00000592395.5, ENST00000592628.5, ENST00000593064.5, ENST00000611869.5, ENST00000651991.1

Found 810 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCCCCAGCTAGCCAGGCCCACACCTGGGTGCCACAGTGACCACTaGCCTAGTTCGTGTGGAACTGGATGGGATCCCAGGGTAGGAGAC +
Preference number: 1 (lower is better)
Translates to: GPQLARPTPGCHSDH*PSSCGTGWDPRVGD
Trigger: GTCTCCTACCCTGGGATCCCATCCAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCTGGCTAGCTGGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR TCA 90 bp CGCCTGGCCTGGACTGGGGGCAGATACCAGGCATTGAGCTGGCCTTaGGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGCCA +
Preference number: 1 (lower is better)
Translates to: RLAWTGGRYQALSWP*GFPCIYHGAQAPKP
Trigger: TGGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTGCCCCCAGTCCAGGCCAGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR CCA 90 bp ATACCAGGCATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATaGGGCCCAGGCTCCCAAGCCAGTCTGGGGAGGGGAGTCAGGCAG +
Preference number: 1 (lower is better)
Translates to: IPGIELALRFPLHLP*GPGSQASLGRGVRQ
Trigger: CTGCCTGACTCCCCTCCCCAGACTGGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCCTGGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR TCA 90 bp CCAGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTaGATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACT +
Preference number: 1 (lower is better)
Translates to: PGTAVSSSSRWVNLV*ILCRTHSSRGYGAT
Trigger: AGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR TCA 90 bp AATTGTGGTTCCCAGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTaGATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCT +
Preference number: 1 (lower is better)
Translates to: NCGSQELLFLPPRAG*ISFEFYAERTVPEA
Trigger: AGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCTGGGAACCACAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR CCA 90 bp GGCTCAGGTTTACACGGGGTCTTTTTAATACAACGTTTAATCATCTaGTTGATCAAGAAATGCAATGCTCAGTCTAGGAACAGCAGCAGA +
Preference number: 1 (lower is better)
Translates to: GSGLHGVFLIQRLII*LIKKCNAQSRNSSR
Trigger: TCTGCTGCTGTTCCTAGACTGAGCATTGCATTTCTTGATCAACCAGATGATTAAACGTTGTATTAAAAAGACCCCGTGTAAACCTGAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR TCA 90 bp GGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGTGGGGAGCGAGGCCAGTaGGTGGTAGGCCAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: GTPCWFCSRVGRTAQGLRGERGQ*VVGQGP
Trigger: GGGGCCCTGGCCTACCACTCACTGGCCTCGCTCCCC...ACGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262965.12
ENST00000344749.9
3UTR-3UTR GCA 90 bp GGGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGCCTGAGGGGAGAGGATaGGGCAGGGAAGCCCCAAGG +
Preference number: 2 (lower is better)
Translates to: GDTLLVLQQGRTHSPRPSPEGRG*GREAPR
Trigger: CCTTGGGGCTTCCCTGCCGCATCCTCTCCCCTCAGG...CGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CCA 90 bp GGGAGTCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGGCCCGGGGTCTCGAGTaGCCGTTCTGGGGCCAGAGC +
Preference number: 2 (lower is better)
Translates to: GSQAVQDLLGVTVGVSGVARGLE*PFWGQS
Trigger: GCTCTGGCCCCAGAACGGCCACTCGAGACCCCGGGC...CACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGACTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262965.12
ENST00000344749.9
3UTR CAA 90 bp CCGCCTGGCCTGGACTGGGGGCAGATACCAGGCATTGAGCTGGCCTaGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGCC +
Preference number: 2 (lower is better)
Translates to: PPGLDWGQIPGIELA*RFPLHLPWGPGSQA
Trigger: GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTGCCCCCAGTCCAGGCCAGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR TCA 90 bp AAACAAAAGACCCGCCGCCTGTCCCCGTTCTGTCTGTGTGCAGTGGCTTCCGGGGCCAGAGCACAGGGCTaGAAGCGGGTGGCTCGTCCC +
Preference number: 2 (lower is better)
Translates to: KQKTRRLSPFCLCAVASGARAQG*KRVARP
Trigger: GGGACGAGCCACCCGCTTTCAGCCCTGTGCTCTGGC...CCCGGAAGCCACTGCACACAGACAGAACGGGGACAGGCGGCGGGTCTTTTGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262965.12
ENST00000344749.9
3UTR-3UTR GCA 90 bp GAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGCCCCCGAGGGGACACCCTaGTGGTTCTGCAGCAGGGTC +
Preference number: 2 (lower is better)
Translates to: ELALRFPLHLPWGPGSQAPEGTP*WFCSRV
Trigger: GACCCTGCTGCAGAACCAGCAGGGTGTCCCCTCGGG...GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CCA 90 bp GAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGCCGGCTGGCCAGGCCCCTaGCATCCTGTCTACGTCACG +
Preference number: 2 (lower is better)
Translates to: ELALRFPLHLPWGPGSQAGWPGP*HPVYVT
Trigger: CGTGACGTAGACAGGATGCCAGGGGCCTGGCCAGCC...GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CCA 90 bp GAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGCCACCTGGAGAGAGGCCTaGGTGCTGGGACATGGGACA +
Preference number: 2 (lower is better)
Translates to: ELALRFPLHLPWGPGSQATWREA*VLGHGT
Trigger: TGTCCCATGTCCCAGCACCCAGGCCTCTCTCCAGGT...GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR TCA 90 bp AAGCCCCAAGGTGCCTTCATCAGGGAACGCCCACGCATCACTTTCCACATGACAGCCAGAGCACAGGGCTaGAAGCGGGTGGCTCGTCCC +
Preference number: 2 (lower is better)
Translates to: KPQGAFIRERPRITFHMTARAQG*KRVARP
Trigger: GGGACGAGCCACCCGCTTTCAGCCCTGTGCTCTGGC...TGTCATGTGGAAAGTGATGCGTGGGCGTTCCCTGATGAAGGCACCTTGGGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262965.12
ENST00000344749.9
3UTR-3UTR GCA 90 bp CAGGCCCCTGGCATCCTGTCTACGTCACGATGGCCCTCTGGTGTAATGGGGACAAGGGAAGCCCCAAGGTaGCTTCATCAGGGAACGCCC +
Preference number: 2 (lower is better)
Translates to: QAPGILSTSRWPSGVMGTREAPR*LHQGTP
Trigger: GGGCGTTCCCTGATGAAGGCACCTTGGGGCTTCCCT...TGTCCCCATTACACCAGAGGGCCATCGTGACGTAGACAGGATGCCAGGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CCA 90 bp GAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGCCCACAGAGTGACACGGTaGCTGAGATTCGGGGACAGG +
Preference number: 2 (lower is better)
Translates to: ELALRFPLHLPWGPGSQAHRVTR*LRFGDR
Trigger: CCTGTCCCCGAATCTCAGCCACCGTGTCACTCTGTG...GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262965.12
ENST00000344749.9
3UTR-3UTR TCA 90 bp GGGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGGCATCACTTTCCACATaGCAAAACCAAGAGAACCCC +
Preference number: 2 (lower is better)
Translates to: GDTLLVLQQGRTHSPRPSASLST*QNQENP
Trigger: GGGGTTCTCTTGGTTTTGTCATGTGGAAAGTGATGC...CGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR GCA 90 bp CAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGACCAGAAACCTGGGGGCCACAGCTaGTTGGCAGAGTCACCTGGG +
Preference number: 2 (lower is better)
Translates to: QSPASWEELVTLMAKDQKPGGHS*LAESPG
Trigger: CCCAGGTGACTCTGCCAAGCAGCTGTGGCCCCCAGG...TTTCTGGTCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR GCA 90 bp CTGGGGCAAAGGAGTGAAGGACAGGGTGTCCAGGAGGTCCCCAGCACCGGGCTCCATTTCAGAGAGCTGTaGAGGTTCCAAGGGAGAGCA +
Preference number: 2 (lower is better)
Translates to: LGQRSEGQGVQEVPSTGLHFREL*RFQGRA
Trigger: TGCTCTCCCTTGGAACCTGCACAGCTCTCTGAAATG...GAGCCCGGTGCTGGGGACCTCCTGGACACCCTGTCCTTCACTCCTTTGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CCA 90 bp GGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGTCAGTTTCAGGATCCATaGGACAGGTCACAGAGTGAC +
Preference number: 2 (lower is better)
Translates to: GTPCWFCSRVGRTAQGLRQFQDP*DRSQSD
Trigger: GTCACTCTGTGACCTGTCCCATGGATCCTGAAACTG...ACGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262965.12
ENST00000344749.9
3UTR-3UTR CCA 90 bp CCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGAGGGGGTGTCCTGTGCTaGCTCCTGAGCAGCATCCTC +
Preference number: 2 (lower is better)
Translates to: PKTVPSQLGRAGYPHGKRGGVLC*LLSSIL
Trigger: GAGGATGCTGCTCAGGAGCCAGCACAGGACACCCCC...TCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CCA 90 bp TCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGGCACGGTCACGATGGCCCTCTaGTGTAATGGGGACATGGTG +
Preference number: 2 (lower is better)
Translates to: SGSPGSPGGNGGSLRSGTVTMAL*CNGDMV
Trigger: CACCATGTCCCCATTACACCAGAGGGCCATCGTGAC...CGTGCCACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CCA 90 bp GAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGCCGTCACGATGGCCCTCTaGTGTAATGGGGACATGGTG +
Preference number: 2 (lower is better)
Translates to: ELALRFPLHLPWGPGSQAVTMAL*CNGDMV
Trigger: CACCATGTCCCCATTACACCAGAGGGCCATCGTGAC...GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CCA 90 bp GAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGCCCTGTCTACGTCACGATaGCCCTCTGGTGTAATGGGG +
Preference number: 2 (lower is better)
Translates to: ELALRFPLHLPWGPGSQALSTSR*PSGVMG
Trigger: CCCCATTACACCAGAGGGCCATCGTGACGTAGACAG...GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR TCA 90 bp TTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCTCAGAGCCACCTTGCTaGCGTCCCTTCCCCCAAGCC +
Preference number: 2 (lower is better)
Translates to: FKPKTVPSQLGRAGYPHGSEPPC*RPFPQA
Trigger: GGCTTGGGGGAAGGGACGTCAGCAAGGTGGCTCTGA...GCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR TCA 90 bp CTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGGACCTGCAGCGGGGATaGACACAGCCAGCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: LLALGESRLNSMQNAQFQDLQRG*TQPAQG
Trigger: CCCCTGGGCTGGCTGTGTTCATCCCCGCTGCAGGTC...CTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CCA 90 bp CCAGGAGCAAAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGGCCCGGGGTCTCGAGTaGCCGTTCTGGGGCCAGAGC +
Preference number: 2 (lower is better)
Translates to: PGAKQEGEASSLKRSNSQARGLE*PFWGQS
Trigger: GCTCTGGCCCCAGAACGGCCACTCGAGACCCCGGGC...CTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTTTGCTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262965.12
ENST00000344749.9
3UTR-3UTR TCA 90 bp TTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCTCCTGTGCTGGCTCCTaGGCAGCATCCTCTCAGCCA +
Preference number: 2 (lower is better)
Translates to: FKPKTVPSQLGRAGYPHGSCAGS*AASSQP
Trigger: TGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGA...GCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR TCA 90 bp TTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCGCTCCAGCCCCAGGATaGCCTGCACGGCCTGCTGCA +
Preference number: 2 (lower is better)
Translates to: FLLALGESRLNSMQNAQFAPAPG*PARPAA
Trigger: TGCAGCAGGCCGTGCAGGTCATCCTGGGGCTGGAGC...GAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592395.5
3UTR-3UTR GCA 90 bp CTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGCCCGAGGGGACACCCTaGTGGTTCTGCAGCAGGGTC +
Preference number: 2 (lower is better)
Translates to: LLALGESRLNSMQNAQFQPEGTP*WFCSRV
Trigger: GACCCTGCTGCAGAACCAGCAGGGTGTCCCCTCGGG...CTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR TCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCGGGGAGCGAGGCCAGTaGGTGGTAGGCCAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: RISQVSTASPLSDMFPFLGERGQ*VVGQGP
Trigger: GGGGCCCTGGCCTACCACTCACTGGCCTCGCTCCCC...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
ENST00000590684.5
3UTR-3UTR GCA 90 bp CTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGGTGTGGTCCCCATaGCAGGGGTCACTGGTCCCA +
Preference number: 2 (lower is better)
Translates to: LLALGESRLNSMQNAQFQRVWSP*QGSLVP
Trigger: TGGGACCAGTGACCCCTGGCATGGGGACCACACCCT...CTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR TCA 90 bp CAGGCCCCTGGCATCCTGTCTACGTCACGATGGCCCTCTGGTGTAATGGGGACACCACAGCATCCCCCTTaGGTGATATGTTTCCATTTC +
Preference number: 2 (lower is better)
Translates to: QAPGILSTSRWPSGVMGTPQHPP*VICFHF
Trigger: GAAATGGAAACATATCACTCAAGGGGGATGCTGTGG...TGTCCCCATTACACCAGAGGGCCATCGTGACGTAGACAGGATGCCAGGGGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR TCA 90 bp CTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGCCTGGGGCAAAGGAGTaGAGGACAGGGTGTCCAGGA +
Preference number: 2 (lower is better)
Translates to: LLALGESRLNSMQNAQFQPGAKE*RTGCPG
Trigger: TCCTGGACACCCTGTCCTTCACTCCTTTGCCCCAGG...CTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR TCA 90 bp CTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGTCCTGTGCTGGCTCCTaGGCAGCATCCTCTCAGCCA +
Preference number: 2 (lower is better)
Translates to: LLALGESRLNSMQNAQFQSCAGS*AASSQP
Trigger: TGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGA...CTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR GCA 90 bp CTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGACACCCTGCTGGTTCTaGAGCAGGGTCGGACGCACA +
Preference number: 2 (lower is better)
Translates to: LLALGESRLNSMQNAQFQTPCWF*SRVGRT
Trigger: TGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGT...CTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCGCCCGGGGTCTCGAGTaGCCGTTCTGGGGCCAGAGC +
Preference number: 2 (lower is better)
Translates to: RISQVSTASPLSDMFPFLARGLE*PFWGQS
Trigger: GCTCTGGCCCCAGAACGGCCACTCGAGACCCCGGGC...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
ENST00000590684.5
3UTR-3UTR CCA 90 bp CTTAAGAGATCAAACTCCCAGGGCGTAGGGGAAGCCACCGAGAAGGGAGAGGCACGAACCTTGTCAGGTTaGTGTTGGCTCGATGCTGAC +
Preference number: 2 (lower is better)
Translates to: LKRSNSQGVGEATEKGEARTLSG*CWLDAD
Trigger: GTCAGCATCGAGCCAACACCAACCTGACAAGGTTCG...TGCCTCTCCCTTCTCGGTGGCTTCCCCTACGCCCTGGGAGTTTGATCTCTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262965.12
ENST00000344749.9
3UTR-3UTR CCA 90 bp AAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGGGCGTAGGGAGCCACTCTTGCCCTTaGACCACACAGAGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: KQEGEASSLKRSNSQGVGSHSCP*TTQREG
Trigger: GCCCTCCCTCTGTGTGGTCCAAGGGCAAGAGTGGCT...CCCTACGCCCTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CCA 90 bp CTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGACCTGGAGAGAGGCCTaGGTGCTGGGACATGGGACA +
Preference number: 2 (lower is better)
Translates to: LLALGESRLNSMQNAQFQTWREA*VLGHGT
Trigger: TGTCCCATGTCCCAGCACCCAGGCCTCTCTCCAGGT...CTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CCA 90 bp CCAGGAGCAAAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGGCTCCCAAGCCAGTCTaGGGAGGGGAGTCAGGCAGT +
Preference number: 2 (lower is better)
Translates to: PGAKQEGEASSLKRSNSQAPKPV*GGESGS
Trigger: ACTGCCTGACTCCCCTCCCCAGACTGGCTTGGGAGC...CTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTTTGCTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR CAA 90 bp CCCAGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTaGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCAC +
Preference number: 2 (lower is better)
Translates to: PRNCCFFLLALGESR*NSMQNAQFQRLWGH
Trigger: GTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR TCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCGCCAGAGCACAGGGCTaGAAGCGGGTGGCTCGTCCC +
Preference number: 2 (lower is better)
Translates to: RISQVSTASPLSDMFPFLARAQG*KRVARP
Trigger: GGGACGAGCCACCCGCTTTCAGCCCTGTGCTCTGGC...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
ENST00000590684.5
3UTR-3UTR TCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCGCTCCAGCCCCAGGATaGCCTGCACGGCCTGCTGCA +
Preference number: 2 (lower is better)
Translates to: RISQVSTASPLSDMFPFLAPAPG*PARPAA
Trigger: TGCAGCAGGCCGTGCAGGTCATCCTGGGGCTGGAGC...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651991.1
3UTR-3UTR CCA 90 bp CCAGGAGCAAAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGAGCCACTCTTGCCCTTaGACCACACAGAGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: PGAKQEGEASSLKRSNSQSHSCP*TTQREG
Trigger: GCCCTCCCTCTGTGTGGTCCAAGGGCAAGAGTGGCT...CTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTTTGCTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CCA 90 bp CCAGGAGCAAAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGACCTGGAGAGAGGCCTaGGTGCTGGGACATGGGACA +
Preference number: 2 (lower is better)
Translates to: PGAKQEGEASSLKRSNSQTWREA*VLGHGT
Trigger: TGTCCCATGTCCCAGCACCCAGGCCTCTCTCCAGGT...CTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTTTGCTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR GCA 90 bp GAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGCCTGGTTGATCAAGAAATaGAATGCTCAGTCTAGGAAC +
Preference number: 2 (lower is better)
Translates to: ELALRFPLHLPWGPGSQAWLIKK*NAQSRN
Trigger: GTTCCTAGACTGAGCATTGCATTTCTTGATCAACCA...GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR GCA 90 bp CCTGGCCTGGACTGGGGGCAGATACCAGGCATTGAGCTGGCCTTGAGGTTTCCCTGGTTGATCAAGAAATaGAATGCTCAGTCTAGGAAC +
Preference number: 2 (lower is better)
Translates to: PGLDWGQIPGIELALRFPWLIKK*NAQSRN
Trigger: GTTCCTAGACTGAGCATTGCATTTCTTGATCAACCA...GGGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTGCCCCCAGTCCAGGCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR GCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCCGCTCTCGCACCTGCTaGTCCAGCCCCAGGATGACC +
Preference number: 2 (lower is better)
Translates to: RISQVSTASPLSDMFPFLRSRTC*SSPRMT
Trigger: GGTCATCCTGGGGCTGGAGCAGCAGGTGCGAGAGCG...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651991.1
3UTR-3UTR CCA 90 bp TTAATCATCTGGTTGATCAAGAAATGCAATGCTCAGTCTAGGAACAGCAGCAGAGCCCGGGGTCTCGAGTaGCCGTTCTGGGGCCAGAGC +
Preference number: 2 (lower is better)
Translates to: LIIWLIKKCNAQSRNSSRARGLE*PFWGQS
Trigger: GCTCTGGCCCCAGAACGGCCACTCGAGACCCCGGGC...TCTGCTGCTGTTCCTAGACTGAGCATTGCATTTCTTGATCAACCAGATGATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
3UTR-3UTR CCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCGCTCCCGCGCGTTATTaGCCATGCGCCTCTCCCGGT +
Preference number: 2 (lower is better)
Translates to: RISQVSTASPLSDMFPFLAPARY*PCASPG
Trigger: ACCGGGAGAGGCGCATGGCCAATAACGCGCGGGAGC...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651991.1
3UTR-3UTR TCA 90 bp TTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCCCACAGCATCCCCCTTaGGTGATATGTTTCCATTTC +
Preference number: 2 (lower is better)
Translates to: FKPKTVPSQLGRAGYPHGPQHPP*VICFHF
Trigger: GAAATGGAAACATATCACTCAAGGGGGATGCTGTGG...GCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR TCA 90 bp CTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGGCATTGAGCTGGCCTTaGGGTTTCCCTTGCATCTAC +
Preference number: 2 (lower is better)
Translates to: LLALGESRLNSMQNAQFQALSWP*GFPCIY
Trigger: GTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGC...CTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR TCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCCGGCCTGCTGCAGGATaGGCAGCTTGGTCTGCGCTT +
Preference number: 2 (lower is better)
Translates to: RISQVSTASPLSDMFPFLRPAAG*AAWSAL
Trigger: AAGCGCAGACCAAGCTGCTCATCCTGCAGCAGGCCG...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651991.1
3UTR-3UTR GCA 90 bp CAGGCCCCTGGCATCCTGTCTACGTCACGATGGCCCTCTGGTGTAATGGGGACATGGTTGATCAAGAAATaGAATGCTCAGTCTAGGAAC +
Preference number: 2 (lower is better)
Translates to: QAPGILSTSRWPSGVMGTWLIKK*NAQSRN
Trigger: GTTCCTAGACTGAGCATTGCATTTCTTGATCAACCA...TGTCCCCATTACACCAGAGGGCCATCGTGACGTAGACAGGATGCCAGGGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR GCA 90 bp CTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGTGCCACAGTGACCACTaGCCTAGTTCGTGTGGAACT +
Preference number: 2 (lower is better)
Translates to: LLALGESRLNSMQNAQFQCHSDH*PSSCGT
Trigger: AGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCA...CTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR GCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCAGCCCCAGGATGACCTaGACGGCCTGCTGCAGGATG +
Preference number: 2 (lower is better)
Translates to: RISQVSTASPLSDMFPFLSPRMT*TACCRM
Trigger: CATCCTGCAGCAGGCCGTGCAGGTCATCCTGGGGCT...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651991.1
3UTR-3UTR GCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCTTCCGCTCTCGCACCTaGTGCTCCAGCCCCAGGATG +
Preference number: 2 (lower is better)
Translates to: RISQVSTASPLSDMFPFLFRSRT*CSSPRM
Trigger: CATCCTGGGGCTGGAGCAGCAGGTGCGAGAGCGGAA...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651991.1
3UTR-3UTR CCA 90 bp GCAATGCTCAGTCTAGGAACAGCAGCAGAAATAGCGAGAGACACGGGACTTTTACACAGAGTGACACGGTaGCTGAGATTCGGGGACAGG +
Preference number: 2 (lower is better)
Translates to: AMLSLGTAAEIARDTGLLHRVTR*LRFGDR
Trigger: CCTGTCCCCGAATCTCAGCCACCGTGTCACTCTGTG...TAAAAGTCCCGTGTCTCTCGCTATTTCTGCTGCTGTTCCTAGACTGAGCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
3UTR-3UTR GCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCACCTGCACGGCCTGCTaGAGGATGAGCAGCTTGGTC +
Preference number: 2 (lower is better)
Translates to: RISQVSTASPLSDMFPFLTCTAC*RMSSLV
Trigger: GACCAAGCTGCTCATCCTGCAGCAGGCCGTGCAGGT...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651991.1
3UTR-3UTR CCA 90 bp CCAGGAGCAAAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGCCAGCTGGGAAGAGCTaGTTACCCTCATGGCAAAAG +
Preference number: 2 (lower is better)
Translates to: PGAKQEGEASSLKRSNSQPAGKS*LPSWQK
Trigger: CTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGG...CTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTTTGCTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR TCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCGCGCTTTGTCCGACTTaGGGTGCATCTGGCACATGC +
Preference number: 2 (lower is better)
Translates to: RISQVSTASPLSDMFPFLALCPT*GASGTC
Trigger: GCATGTGCCAGATGCACCTCAAGTCGGACAAAGCGC...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651991.1
3UTR-3UTR GCA 90 bp AAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGGGCGTAGGGCTGGTCCCAACAAAATaGCCCATTTCAGAGAGCTGT +
Preference number: 2 (lower is better)
Translates to: KQEGEASSLKRSNSQGVGLVPTK*PISESC
Trigger: ACAGCTCTCTGAAATGGGGCATTTTGTTGGGACCAG...CCCTACGCCCTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR GCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCTTGTCCGACTTGAGGTaGATCTGGCACATGCGCCCC +
Preference number: 2 (lower is better)
Translates to: RISQVSTASPLSDMFPFLLSDLR*IWHMRP
Trigger: GGGGCGCATGTGCCAGATGCACCTCAAGTCGGACAA...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651991.1
3UTR-3UTR CCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCCACAGAGTGACACGGTaGCTGAGATTCGGGGACAGG +
Preference number: 2 (lower is better)
Translates to: RISQVSTASPLSDMFPFLHRVTR*LRFGDR
Trigger: CCTGTCCCCGAATCTCAGCCACCGTGTCACTCTGTG...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
ENST00000590684.5
3UTR-3UTR TCA 90 bp CCAGGAGCAAAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGGCATCACTTTCCACATaGCAAAACCAAGAGAACCCC +
Preference number: 2 (lower is better)
Translates to: PGAKQEGEASSLKRSNSQASLST*QNQENP
Trigger: GGGGTTCTCTTGGTTTTGTCATGTGGAAAGTGATGC...CTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTTTGCTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR GCA 90 bp TTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCTGGTTGATCAAGAAATaGAATGCTCAGTCTAGGAAC +
Preference number: 2 (lower is better)
Translates to: FKPKTVPSQLGRAGYPHGWLIKK*NAQSRN
Trigger: GTTCCTAGACTGAGCATTGCATTTCTTGATCAACCA...GCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR GCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCATGAGCAGCTTGGTCTaGGCTTTGTCCGACTTGAGG +
Preference number: 2 (lower is better)
Translates to: RISQVSTASPLSDMFPFLMSSLV*ALSDLR
Trigger: CCTCAAGTCGGACAAAGCGCAGACCAAGCTGCTCAT...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651991.1
3UTR-3UTR CCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCCAGTTTCAGGATCCATaGGACAGGTCACAGAGTGAC +
Preference number: 2 (lower is better)
Translates to: RISQVSTASPLSDMFPFLQFQDP*DRSQSD
Trigger: GTCACTCTGTGACCTGTCCCATGGATCCTGAAACTG...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
ENST00000590684.5
3UTR CAA 90 bp TCAGGTTTACACGGGGTCTTTTTAATACAACGTTTAATCATCTGGTaGATCAAGAAATGCAATGCTCAGTCTAGGAACAGCAGCAGAAAT +
Preference number: 2 (lower is better)
Translates to: SGLHGVFLIQRLIIW*IKKCNAQSRNSSRN
Trigger: ATTTCTGCTGCTGTTCCTAGACTGAGCATTGCATTTCTTGATCAACCAGATGATTAAACGTTGTATTAAAAAGACCCCGTGTAAACCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR CCA 72 bp CCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTaGACCACACAGAGGGAGGGCAGCAGGTGTGGCCCC +
Preference number: 3 (lower is better)
Translates to: PAQSPGSSHSCP*TTQREGSRCGP
Trigger: GGGGCCACACCTGCTGCCCTCCCTCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR TCA 72 bp CAAGGCCTCAATGCAGGGAGGGGCATGAAGGGCACATaGAGGCCCCCAGCTAGCCAGGCCCACACCTGGGTG +
Preference number: 3 (lower is better)
Translates to: QGLNAGRGMKGT*RPPASQAHTWV
Trigger: CACCCAGGTGTGGGCCTGGCTAGCTGGGGGCCTTCATGTGCCCTTCATGCCCCTCCCTGCATTGAGGCCTTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CAA 90 bp CCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGAGGCCTGGGGAGGGCGTaGTGTAGGGTAGCCCTGGGG +
Preference number: 3 (lower is better)
Translates to: PKTVPSQLGRAGYPHGKRGLGRA*CRVALG
Trigger: CCCCAGGGCTACCCTACACAACGCCCTCCCCAGGCC...TCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CAA 90 bp TCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGGCACGCGGCTCCAGCCACTCTaGCCCTTGGACCACACAGAG +
Preference number: 3 (lower is better)
Translates to: SGSPGSPGGNGGSLRSGTRLQPL*PLDHTE
Trigger: CTCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCG...CGTGCCACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR GCA 72 bp CATGAAGGCCCCCAGCTAGCCAGGCCCACACCTGGGTaGCACAGTGACCACTGCCCTAGTTCGTGTGGAACT +
Preference number: 3 (lower is better)
Translates to: HEGPQLARPTPG*HSDHCPSSCGT
Trigger: AGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCTGGCTAGCTGGGGGCCTTCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR GCA 72 bp ATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTaGCCACCCAGACCTAGGGGCAGGGCCAGGAGCAAA +
Preference number: 3 (lower is better)
Translates to: MQNAQFQRLWGH*PPRPRGRARSK
Trigger: TTTGCTCCTGGCCCTGCCCCTAGGTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR TCA 72 bp TGGACTGGGGGCAGATACCAGGCATTGAGCTGGCCTTaGGGTTTCCCTTGCATCTACCATGGGGCCCAGGCT +
Preference number: 3 (lower is better)
Translates to: WTGGRYQALSWP*GFPCIYHGAQA
Trigger: AGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTGCCCCCAGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR TCA 72 bp TCCGCCTGGCCTGGACTGGGGGCAGATACCAGGCATTaGGCTGGCCTTGAGGTTTCCCTTGCATCTACCATG +
Preference number: 3 (lower is better)
Translates to: SAWPGLGADTRH*AGLEVSLASTM
Trigger: CATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTGCCCCCAGTCCAGGCCAGGCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CAA 90 bp CTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGCGGCTCCAGCCACTCTaGCCCTTGGACCACACAGAG +
Preference number: 3 (lower is better)
Translates to: LLALGESRLNSMQNAQFQRLQPL*PLDHTE
Trigger: CTCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCG...CTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CAA 90 bp CCAGGCCCACACCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGTCCACAGCATCCCCCTaGAGTGATATGTTTCCATTT +
Preference number: 3 (lower is better)
Translates to: PGPHLGATVTTALVRVELSTASP*SDMFPF
Trigger: AAATGGAAACATATCACTCAAGGGGGATGCTGTGGA...CAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CAA 90 bp CCAGGAGCAAAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGCAGCCACTCTTGCCCTaGGACCACACAGAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: PGAKQEGEASSLKRSNSQQPLLP*DHTEGG
Trigger: CCCTCCCTCTGTGTGGTCCAAGGGCAAGAGTGGCTG...CTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTTTGCTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CAA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCCGCTCCCGCGCGTTATaGGCCATGCGCCTCTCCCGG +
Preference number: 3 (lower is better)
Translates to: RISQVSTASPLSDMFPFLRSRAL*AMRLSR
Trigger: CCGGGAGAGGCGCATGGCCAATAACGCGCGGGAGCG...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651991.1
3UTR-3UTR CAA 90 bp GAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGCCCCAAAGGCAGCATCCTaGCTAATTTTCATCTACATT +
Preference number: 3 (lower is better)
Translates to: ELALRFPLHLPWGPGSQAPKAAS*LIFIYI
Trigger: AATGTAGATGAAAATTAGCAAGGATGCTGCCTTTGG...GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CAA 90 bp CTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGTGCGCTTTGTCCGACTaGAGGTGCATCTGGCACATG +
Preference number: 3 (lower is better)
Translates to: LLALGESRLNSMQNAQFQCALSD*RCIWHM
Trigger: CATGTGCCAGATGCACCTCAAGTCGGACAAAGCGCA...CTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592395.5
3UTR-3UTR CAA 90 bp CTTAAGAGATCAAACTCCCAGGGCGTAGGGGAAGCCACCGAGAAGGGAGAGGCATCGCTTAGGCACAATTaGCTGGTGGCTTTAGAAGAA +
Preference number: 3 (lower is better)
Translates to: LKRSNSQGVGEATEKGEASLRHN*LVALEE
Trigger: TTCTTCTAAAGCCACCAGCAAATTGTGCCTAAGCGA...TGCCTCTCCCTTCTCGGTGGCTTCCCCTACGCCCTGGGAGTTTGATCTCTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CAA 90 bp TGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGTCGCTTAGGCACAATTaGCTGGTGGCTTTAGAAGAA +
Preference number: 3 (lower is better)
Translates to: CPVLAPEQHPLSQSSEHESLRHN*LVALEE
Trigger: TTCTTCTAAAGCCACCAGCAAATTGTGCCTAAGCGA...CTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CAA 90 bp CCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGCCTCCAAAGGCAGCATCCTaGCTAATTTTCATCTACATT +
Preference number: 3 (lower is better)
Translates to: PVLAPEQHPLSQSSEHEPPKAAS*LIFIYI
Trigger: AATGTAGATGAAAATTAGCAAGGATGCTGCCTTTGG...AGGCTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CAA 90 bp TGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGCCAAAGGCAGCATCCTaGCTAATTTTCATCTACATT +
Preference number: 3 (lower is better)
Translates to: CPVLAPEQHPLSQSSEHEPKAAS*LIFIYI
Trigger: AATGTAGATGAAAATTAGCAAGGATGCTGCCTTTGG...CTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CAA 90 bp CCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGACCAAAGGCAGCATCCTaGCTAATTTTCATCTACATT +
Preference number: 3 (lower is better)
Translates to: PKTVPSQLGRAGYPHGKRPKAAS*LIFIYI
Trigger: AATGTAGATGAAAATTAGCAAGGATGCTGCCTTTGG...TCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CAA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCTGCAGGATGAGCAGCTaGGTCTGCGCTTTGTCCGAC +
Preference number: 3 (lower is better)
Translates to: RISQVSTASPLSDMFPFLCRMSS*VCALSD
Trigger: GTCGGACAAAGCGCAGACCAAGCTGCTCATCCTGCA...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651991.1
3UTR TCA 72 bp GCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTaGATTCTATGCAGAACGCACAGTTCCAGAGGCTAT +
Preference number: 3 (lower is better)
Translates to: AVSSSSRWVNLV*ILCRTHSSRGY
Trigger: ATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CAA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCTGCGCTTTGTCCGACTaGAGGTGCATCTGGCACATG +
Preference number: 3 (lower is better)
Translates to: RISQVSTASPLSDMFPFLCALSD*RCIWHM
Trigger: CATGTGCCAGATGCACCTCAAGTCGGACAAAGCGCA...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651991.1
3UTR-3UTR CAA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCAGCTTGGTCTGCGCTTaGTCCGACTTGAGGTGCATC +
Preference number: 3 (lower is better)
Translates to: RISQVSTASPLSDMFPFLSLVCA*SDLRCI
Trigger: GATGCACCTCAAGTCGGACAAAGCGCAGACCAAGCT...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651991.1
3UTR-3UTR CAA 90 bp TTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTCCACAGCATCCCCCTaGAGTGATATGTTTCCATTT +
Preference number: 3 (lower is better)
Translates to: FFLLALGESRLNSMQNAQSTASP*SDMFPF
Trigger: AAATGGAAACATATCACTCAAGGGGGATGCTGTGGA...CTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CAA 90 bp CAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGACCAGAAACGTTTAATCATCTGGTaGATCAAGAAATGCAATGCT +
Preference number: 3 (lower is better)
Translates to: QSPASWEELVTLMAKDQKRLIIW*IKKCNA
Trigger: AGCATTGCATTTCTTGATCAACCAGATGATTAAACG...TTTCTGGTCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR-3UTR CAA 90 bp AGGTTTACACGGGGTCTTTTTAATACAACGTTTAATCATCTGGTTGATCAAGAATCGCTTAGGCACAATTaGCTGGTGGCTTTAGAAGAA +
Preference number: 3 (lower is better)
Translates to: RFTRGLFNTTFNHLVDQESLRHN*LVALEE
Trigger: TTCTTCTAAAGCCACCAGCAAATTGTGCCTAAGCGA...TTCTTGATCAACCAGATGATTAAACGTTGTATTAAAAAGACCCCGTGTAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR CCA 72 bp TTACACGGGGTCTTTTTAATACAACGTTTAATCATCTaGTTGATCAAGAAATGCAATGCTCAGTCTAGGAAC +
Preference number: 3 (lower is better)
Translates to: LHGVFLIQRLII*LIKKCNAQSRN
Trigger: GTTCCTAGACTGAGCATTGCATTTCTTGATCAACCAGATGATTAAACGTTGTATTAAAAAGACCCCGTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CAGACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTGGACCACACAGAGGGCTGTCGGCCCCGCTaGCAGGCGGCGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QTSTVPRLQPLLPLDHTEGCRPR*QAACGW
Trigger: CCAGCCACACGCCGCCTGTCAGCGGGGCCGACAGCC...CTCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGTCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp GGGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGCCTTCTCCTCCCGCTTaGTCTCGCTGGCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GDTLLVLQQGRTHSPRPSPSPPA*SRWRPP
Trigger: CGGCGGCCGCCAGCGAGATCAAGCGGGAGGAGAAGG...CGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CTGGGGCAAAGGAGTGAAGGACAGGGTGTCCAGGAGGTCCCCAGCACCGGGCTCGTCCTCGTCCTCGTCTaGGCTGGTCCGGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LGQRSEGQGVQEVPSTGLVLVLV*AGPGPG
Trigger: CCCCGGGCCCGGACCAGCCCAGACGAGGACGAGGAC...GAGCCCGGTGCTGGGGACCTCCTGGACACCCTGTCCTTCACTCCTTTGCCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262965.12
ENST00000593064.5
CDS-3UTR TCA 90 bp CTGGGGCAAAGGAGTGAAGGACAGGGTGTCCAGGAGGTCCCCAGCACCGGGCTCCCTTCTCCTCCCGCTTaGTCTCGCTGGCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LGQRSEGQGVQEVPSTGLPSPPA*SRWRPP
Trigger: CGGCGGCCGCCAGCGAGATCAAGCGGGAGGAGAAGG...GAGCCCGGTGCTGGGGACCTCCTGGACACCCTGTCCTTCACTCCTTTGCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CTGGGGCAAAGGAGTGAAGGACAGGGTGTCCAGGAGGTCCCCAGCACCGGGCTCCAGGCCGCCCACGCCTaGGTCTCTCCCGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LGQRSEGQGVQEVPSTGLQAAHA*VSPEGG
Trigger: GCCTCCTTCGGGAGAGACGCAGGCGTGGGCGGCCTG...GAGCCCGGTGCTGGGGACCTCCTGGACACCCTGTCCTTCACTCCTTTGCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp GGAGAGGATGCGGCAGGGAAGCCCCAAGGTGCCTTCATCAGGGAACGCCCACGCGCATGTCGCCGGCTGTaGCCACGGCGTGGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: GEDAAGKPQGAFIRERPRACRRL*PRRGCG
Trigger: TCCGCAGCCACGCCGTGGGCACAGCCGGCGACATGC...GCGTGGGCGTTCCCTGATGAAGGCACCTTGGGGCTTCCCTGCCGCATCCTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp GGGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGTGCTGCTGGGGGTCTTaGCGGACGGGTAGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: GDTLLVLQQGRTHSPRPSCCWGS*RTGRRW
Trigger: CCACCGCCTACCCGTCCGCCAAGACCCCCAGCAGCA...CGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp GGAGAGGATGCGGCAGGGAAGCCCCAAGGTGCCTTCATCAGGGAACGCCCACGCGGGTGCCTGGCTGGCTaGGGAGGGCCGCGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: GEDAAGKPQGAFIRERPRGCLAG*GGPRGC
Trigger: ACAACCACGCGGCCCTCCCCAGCCAGCCAGGCACCC...GCGTGGGCGTTCCCTGATGAAGGCACCTTGGGGCTTCCCTGCCGCATCCTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp GGGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGCCCCTCCGCCTGGCCTaGACTGGGGGCAGATACCAG +
Preference number: 4 (lower is better)
Translates to: GDTLLVLQQGRTHSPRPSPLRLA*TGGRYQ
Trigger: CTGGTATCTGCCCCCAGTCCAGGCCAGGCGGAGGGG...CGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp GGAGAGGATGCGGCAGGGAAGCCCCAAGGTGCCTTCATCAGGGAACGCCCACGCCCCGCTCACCGCTCTTaGCTCCGAGTCCCGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GEDAAGKPQGAFIRERPRPAHRS*LRVPVP
Trigger: TGGGACCGGGACTCGGAGGCAAGAGCGGTGAGCGGG...GCGTGGGCGTTCCCTGATGAAGGCACCTTGGGGCTTCCCTGCCGCATCCTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262965.12
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp GGGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGCTCTCCGCCGGGAGCTaGCGGAGTAGGAGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: GDTLLVLQQGRTHSPRPSLSAGS*RSRRGS
Trigger: ACTACCCCTCCTACTCCGGCAGCTCCCGGCGGAGAG...CGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CTGGGGCAAAGGAGTGAAGGACAGGGTGTCCAGGAGGTCCCCAGCACCGGGCTCGCTGCGTGTCTAGGCTaGCGTCTGCCGCTCTCCGCC +
Preference number: 4 (lower is better)
Translates to: LGQRSEGQGVQEVPSTGLAACLG*RLPLSA
Trigger: GGCGGAGAGCGGCAGACGGCAGCCTAGACACGCAGC...GAGCCCGGTGCTGGGGACCTCCTGGACACCCTGTCCTTCACTCCTTTGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp GGGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGAGGCTATGGGGCCACTaGCCACCCAGACCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: GDTLLVLQQGRTHSPRPSRLWGH*PPRPRG
Trigger: GCCCCTAGGTCTGGGTGGGCAGTGGCCCCATAGCCT...CGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp GAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGCCGCCTGGAAACCCTGCTaGTGGGCGCGGCCGGGCACG +
Preference number: 4 (lower is better)
Translates to: ELALRFPLHLPWGPGSQAAWKPC*WARPGT
Trigger: CGTGCCCGGCCGCGCCCAGCAGCAGGGTTTCCAGGC...GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453954.6
CDS-3UTR CCA 90 bp CAGACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTGGACCACACAGAGGCCCGGGGTCTCGAGTaGCCGTTCTGGGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: QTSTVPRLQPLLPLDHTEARGLE*PFWGQS
Trigger: GCTCTGGCCCCAGAACGGCCACTCGAGACCCCGGGC...CTCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262965.12
ENST00000344749.9
CDS-3UTR CCA 90 bp GGAGAGGATGCGGCAGGGAAGCCCCAAGGTGCCTTCATCAGGGAACGCCCACGCGATGCTCCCCAGCATTaGGGGAGGCTGGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GEDAAGKPQGAFIRERPRDAPQH*GRLARP
Trigger: GGGCCTGGCCAGCCTCCCCCAATGCTGGGGAGCATC...GCGTGGGCGTTCCCTGATGAAGGCACCTTGGGGCTTCCCTGCCGCATCCTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR CAA 72 bp ACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTaGGACCACACAGAGGGAGGGCAGCAGGTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: TSTVPRLQPLLP*DHTEGGQQVWP
Trigger: GGGCCACACCTGCTGCCCTCCCTCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CCTGGCCTGGACTGGGGGCAGATACCAGGCATTGAGCTGGCCTTGAGGTTTCCCCCTTCTCCTCCCGCTTaGTCTCGCTGGCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: PGLDWGQIPGIELALRFPPSPPA*SRWRPP
Trigger: CGGCGGCCGCCAGCGAGATCAAGCGGGAGGAGAAGG...GGGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTGCCCCCAGTCCAGGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CTGGGGCAAAGGAGTGAAGGACAGGGTGTCCAGGAGGTCCCCAGCACCGGGCTCCTCTCCGCCGGGAGCTaGCGGAGTAGGAGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: LGQRSEGQGVQEVPSTGLLSAGS*RSRRGS
Trigger: ACTACCCCTCCTACTCCGGCAGCTCCCGGCGGAGAG...GAGCCCGGTGCTGGGGACCTCCTGGACACCCTGTCCTTCACTCCTTTGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CTGGGGCAAAGGAGTGAAGGACAGGGTGTCCAGGAGGTCCCCAGCACCGGGCTCTGCTGCTGCTTCCACTaGTGCCCACCGGGCCGCTAC +
Preference number: 4 (lower is better)
Translates to: LGQRSEGQGVQEVPSTGLCCCFH*CPPGRY
Trigger: GTAGCGGCCCGGTGGGCAGCAGTGGAAGCAGCAGCA...GAGCCCGGTGCTGGGGACCTCCTGGACACCCTGTCCTTCACTCCTTTGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGGCACGGCATGTCGCCGGCTGTaGCCACGGCGTGGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: SGSPGSPGGNGGSLRSGTACRRL*PRRGCG
Trigger: TCCGCAGCCACGCCGTGGGCACAGCCGGCGACATGC...CGTGCCACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CTGGGGCAAAGGAGTGAAGGACAGGGTGTCCAGGAGGTCCCCAGCACCGGGCTCCCCGAGGGGACACCCTaGTGGTTCTGCAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LGQRSEGQGVQEVPSTGLPEGTP*WFCSRV
Trigger: GACCCTGCTGCAGAACCAGCAGGGTGTCCCCTCGGG...GAGCCCGGTGCTGGGGACCTCCTGGACACCCTGTCCTTCACTCCTTTGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CTGGGGCAAAGGAGTGAAGGACAGGGTGTCCAGGAGGTCCCCAGCACCGGGCTCGGGAGACGCCCGACCTaGAGCGGGGATGAACACAGC +
Preference number: 4 (lower is better)
Translates to: LGQRSEGQGVQEVPSTGLGRRPT*SGDEHS
Trigger: GCTGTGTTCATCCCCGCTGCAGGTCGGGCGTCTCCC...GAGCCCGGTGCTGGGGACCTCCTGGACACCCTGTCCTTCACTCCTTTGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CAGGCCCCTGGCATCCTGTCTACGTCACGATGGCCCTCTGGTGTAATGGGGACACAGGCCTGGAAACCCTaGTGCTGGGCGCGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: QAPGILSTSRWPSGVMGTQAWKP*CWARPG
Trigger: GCCCGGCCGCGCCCAGCAGCAGGGTTTCCAGGCCTG...TGTCCCCATTACACCAGAGGGCCATCGTGACGTAGACAGGATGCCAGGGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453954.6
CDS-3UTR CCA 90 bp GGAGAGGATGCGGCAGGGAAGCCCCAAGGTGCCTTCATCAGGGAACGCCCACGCTGGCTGCGGAGCACGTaGATGGCCTCGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GEDAAGKPQGAFIRERPRWLRST*MASSRW
Trigger: CCACCTGGACGAGGCCATCCACGTGCTCCGCAGCCA...GCGTGGGCGTTCCCTGATGAAGGCACCTTGGGGCTTCCCTGCCGCATCCTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp CCAGGCCCACACCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGGGGTGCCTGGCTGGCTaGGGAGGGCCGCGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: PGPHLGATVTTALVRVELGCLAG*GGPRGC
Trigger: ACAACCACGCGGCCCTCCCCAGCCAGCCAGGCACCC...CAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp GGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGTGGCTGGCCAGGCCCCTaGCATCCTGTCTACGTCACG +
Preference number: 4 (lower is better)
Translates to: GTPCWFCSRVGRTAQGLRGWPGP*HPVYVT
Trigger: CGTGACGTAGACAGGATGCCAGGGGCCTGGCCAGCC...ACGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CAGACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTGGACCACACAGAGCCCCTCCGCCTGGCCTaGACTGGGGGCAGATACCAG +
Preference number: 4 (lower is better)
Translates to: QTSTVPRLQPLLPLDHTEPLRLA*TGGRYQ
Trigger: CTGGTATCTGCCCCCAGTCCAGGCCAGGCGGAGGGG...CTCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CAGACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTGGACCACACAGAGCCGGTCCTCAAGACCTaGACCTCCGAACTGCGCCCC +
Preference number: 4 (lower is better)
Translates to: QTSTVPRLQPLLPLDHTEPVLKT*TSELRP
Trigger: GGGGCGCAGTTCGGAGGTTCAGGTCTTGAGGACCGG...CTCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp GGAGAGGATGCGGCAGGGAAGCCCCAAGGTGCCTTCATCAGGGAACGCCCACGCGCCGTAGTCCTCACCTaGGCTGGGTGGGTACACCGA +
Preference number: 4 (lower is better)
Translates to: GEDAAGKPQGAFIRERPRAVVLT*AGWVHR
Trigger: TCGGTGTACCCACCCAGCTCAGGTGAGGACTACGGC...GCGTGGGCGTTCCCTGATGAAGGCACCTTGGGGCTTCCCTGCCGCATCCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp CTGGGGCAAAGGAGTGAAGGACAGGGTGTCCAGGAGGTCCCCAGCACCGGGCTCCGAGTGGTCAGCCGCTaGCGTGTTCTCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: LGQRSEGQGVQEVPSTGLRVVSR*RVLLVL
Trigger: GAGGACGAGGAGAACACGTCAGCGGCTGACCACTCG...GAGCCCGGTGCTGGGGACCTCCTGGACACCCTGTCCTTCACTCCTTTGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CCAGGCCCACACCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGGACCTGCAGCGGGGATaGACACAGCCAGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PGPHLGATVTTALVRVELDLQRG*TQPAQG
Trigger: CCCCTGGGCTGGCTGTGTTCATCCCCGCTGCAGGTC...CAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGGCACGGCTCCAGCCCCAGGATaGCCTGCACGGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SGSPGSPGGNGGSLRSGTAPAPG*PARPAA
Trigger: TGCAGCAGGCCGTGCAGGTCATCCTGGGGCTGGAGC...CGTGCCACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp TCAGACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTGGACCACACAGAGCTCCAGCCCCAGGATaGCCTGCACGGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SDQHSPPAPATLALGPHRAPAPG*PARPAA
Trigger: TGCAGCAGGCCGTGCAGGTCATCCTGGGGCTGGAGC...TCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGTCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CCAGGCCCCTGGCATCCTGTCTACGTCACGATGGCCCTCTGGTGTAATGGGGACCCCGCTCACCGCTCTTaGCTCCGAGTCCCGGTCCCA +
Preference number: 4 (lower is better)
Translates to: PGPWHPVYVTMALWCNGDPAHRS*LRVPVP
Trigger: TGGGACCGGGACTCGGAGGCAAGAGCGGTGAGCGGG...GTCCCCATTACACCAGAGGGCCATCGTGACGTAGACAGGATGCCAGGGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262965.12
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CAGACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTGGACCACACAGAGGTGCAGGCTGCCATCTaGCACGTAGAAGGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: QTSTVPRLQPLLPLDHTEVQAAI*HVEGGG
Trigger: CCCGCCCCCTTCTACGTGGCAGATGGCAGCCTGCAC...CTCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGGATGGGATCCCGCATGTCGCCGGCTGTaGCCACGGCGTGGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: PGCHSDHCPSSCGTGWDPACRRL*PRRGCG
Trigger: TCCGCAGCCACGCCGTGGGCACAGCCGGCGACATGC...GGGATCCCATCCAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGGCACGCCAGGCAGCAGCGTGTaGATGTCGCCGGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: SGSPGSPGGNGGSLRSGTPGSSV*MSPAVP
Trigger: GGGCACAGCCGGCGACATGCACACGCTGCTGCCTGG...CGTGCCACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp GGGAGTCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGCCAACCAGGCCTGCGTaGCGCCCGCCCAGTGACATG +
Preference number: 4 (lower is better)
Translates to: GSQAVQDLLGVTVGVSGVPTRPA*RPPSDM
Trigger: CATGTCACTGGGCGGGCGGCACGCAGGCCTGGTTGG...CACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGACTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CCAGGCCCCTGGCATCCTGTCTACGTCACGATGGCCCTCTGGTGTAATGGGGACCGTCCTCGGGGTGGCTaGCTCCAACCAGGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: PGPWHPVYVTMALWCNGDRPRGG*LQPGLR
Trigger: ACGCAGGCCTGGTTGGAGGCAGCCACCCCGAGGACG...GTCCCCATTACACCAGAGGGCCATCGTGACGTAGACAGGATGCCAGGGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp GGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGTAGGGCCGCGTGGTTGTaGATGAGGCTGGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GTPCWFCSRVGRTAQGLRRAAWL*MRLVLP
Trigger: AGGCAGCACCAGCCTCATGCACAACCACGCGGCCCT...ACGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CTGGGGCAAAGGAGTGAAGGACAGGGTGTCCAGGAGGTCCCCAGCACCGGGCTCAGGCCCACACCTGGGTaGCACAGTGACCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: LGQRSEGQGVQEVPSTGLRPTPG*HSDHCP
Trigger: AGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCT...GAGCCCGGTGCTGGGGACCTCCTGGACACCCTGTCCTTCACTCCTTTGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp GGAGAGGATGCGGCAGGGAAGCCCCAAGGTGCCTTCATCAGGGAACGCCCACGCGCGCGTTATTGGCCATaGGCCTCTCCCGGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: GEDAAGKPQGAFIRERPRARYWP*ASPGPS
Trigger: TGAGGGACCGGGAGAGGCGCATGGCCAATAACGCGC...GCGTGGGCGTTCCCTGATGAAGGCACCTTGGGGCTTCCCTGCCGCATCCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344749.9
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp CCAGGCCCACACCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGCTGACAGGCGGCGTGTaGCTGGAGACGCCGCCGTAC +
Preference number: 4 (lower is better)
Translates to: PGPHLGATVTTALVRVELLTGGV*LETPPY
Trigger: GTACGGCGGCGTCTCCAGCCACACGCCGCCTGTCAG...CAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp CCTGGCCTGGACTGGGGGCAGATACCAGGCATTGAGCTGGCCTTGAGGTTTCCCCTGACAGGCGGCGTGTaGCTGGAGACGCCGCCGTAC +
Preference number: 4 (lower is better)
Translates to: PGLDWGQIPGIELALRFPLTGGV*LETPPY
Trigger: GTACGGCGGCGTCTCCAGCCACACGCCGCCTGTCAG...GGGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTGCCCCCAGTCCAGGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp TCAGACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTGGACCACACAGACTGACAGGCGGCGTGTaGCTGGAGACGCCGCCGTAC +
Preference number: 4 (lower is better)
Translates to: SDQHSPPAPATLALGPHRLTGGV*LETPPY
Trigger: GTACGGCGGCGTCTCCAGCCACACGCCGCCTGTCAG...TCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGTCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp AAACAAAAGACCCGCCGCCTGTCCCCGTTCTGTCTGTGTGCAGTGGCTTCCGGGGGGTGCCTGGCTGGCTaGGGAGGGCCGCGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: KQKTRRLSPFCLCAVASGGCLAG*GGPRGC
Trigger: ACAACCACGCGGCCCTCCCCAGCCAGCCAGGCACCC...CCCGGAAGCCACTGCACACAGACAGAACGGGGACAGGCGGCGGGTCTTTTGTTT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp GGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGTGAGGGGACACCCTGCTaGTTCTGCAGCAGGGTCGGA +
Preference number: 4 (lower is better)
Translates to: GTPCWFCSRVGRTAQGLREGTPC*FCSRVG
Trigger: TCCGACCCTGCTGCAGAACCAGCAGGGTGTCCCCTC...ACGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp GGAGAGGATGCGGCAGGGAAGCCCCAAGGTGCCTTCATCAGGGAACGCCCACGCCTGGGTGCTGGGACATaGGACACAGATGGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: GEDAAGKPQGAFIRERPRLGAGT*DTDGPE
Trigger: CTCGGGCCCATCTGTGTCCCATGTCCCAGCACCCAG...GCGTGGGCGTTCCCTGATGAAGGCACCTTGGGGCTTCCCTGCCGCATCCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp GGAGAGGATGCGGCAGGGAAGCCCCAAGGTGCCTTCATCAGGGAACGCCCACGCCCCTTGCATCTACCATaGGGCCCAGGCTCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: GEDAAGKPQGAFIRERPRPLHLP*GPGSQA
Trigger: GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGG...GCGTGGGCGTTCCCTGATGAAGGCACCTTGGGGCTTCCCTGCCGCATCCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp GAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGCCCCCCTCCGCCTGGCCTaGACTGGGGGCAGATACCAG +
Preference number: 4 (lower is better)
Translates to: ELALRFPLHLPWGPGSQAPLRLA*TGGRYQ
Trigger: CTGGTATCTGCCCCCAGTCCAGGCCAGGCGGAGGGG...GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CCAGGCCCACACCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGTGCTCGAGGCCACTGTaGCGTTCCTGCCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PGPHLGATVTTALVRVELCSRPL*RSCQAL
Trigger: CAGGGCCTGGCAGGAACGTCACAGTGGCCTCGAGCA...CAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp CTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCTTCCTTCTCCTCCCGCTTaGTCTCGCTGGCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LCRTHSSRGYGATAHPDLPSPPA*SRWRPP
Trigger: CGGCGGCCGCCAGCGAGATCAAGCGGGAGGAGAAGG...AAGGTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587425.5
CDS-3UTR TCA 90 bp GGCATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCGACCTGCAGCGGGGATaGACACAGCCAGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: GIELALRFPLHLPWGPGSDLQRG*TQPAQG
Trigger: CCCCTGGGCTGGCTGTGTTCATCCCCGCTGCAGGTC...GGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TCAGACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTGGACCACACAGACTCTCCGCCGGGAGCTaGCGGAGTAGGAGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: SDQHSPPAPATLALGPHRLSAGS*RSRRGS
Trigger: ACTACCCCTCCTACTCCGGCAGCTCCCGGCGGAGAG...TCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGTCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TCAGACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTGGACCACACAGAGTGCAGGCTGCCATCTaGCACGTAGAAGGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: SDQHSPPAPATLALGPHRVQAAI*HVEGGG
Trigger: CCCGCCCCCTTCTACGTGGCAGATGGCAGCCTGCAC...TCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGTCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp GGGAGTCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGTGCTGCTGCTTCCACTaGTGCCCACCGGGCCGCTAC +
Preference number: 4 (lower is better)
Translates to: GSQAVQDLLGVTVGVSGVCCCFH*CPPGRY
Trigger: GTAGCGGCCCGGTGGGCAGCAGTGGAAGCAGCAGCA...CACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGACTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CCAGGCCCCTGGCATCCTGTCTACGTCACGATGGCCCTCTGGTGTAATGGGGACGGGAGACGCCCGACCTaGAGCGGGGATGAACACAGC +
Preference number: 4 (lower is better)
Translates to: PGPWHPVYVTMALWCNGDGRRPT*SGDEHS
Trigger: GCTGTGTTCATCCCCGCTGCAGGTCGGGCGTCTCCC...GTCCCCATTACACCAGAGGGCCATCGTGACGTAGACAGGATGCCAGGGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp GAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGCCAGGCTATGGGGCCACTaGCCACCCAGACCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: ELALRFPLHLPWGPGSQARLWGH*PPRPRG
Trigger: GCCCCTAGGTCTGGGTGGGCAGTGGCCCCATAGCCT...GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp GGGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGTTCTCCTCCTCCGAGTaGTCAGCCGCTGACGTGTTC +
Preference number: 4 (lower is better)
Translates to: GDTLLVLQQGRTHSPRPSFSSSE*SAADVF
Trigger: GAACACGTCAGCGGCTGACCACTCGGAGGAGGAGAA...CGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGGCACGGCTCCCGGGCGTTATTaGCCACCCGGCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SGSPGSPGGNGGSLRSGTAPGRY*PPGAPS
Trigger: AGAAGGAGCGCCGGGTGGCCAATAACGCCCGGGAGC...CGTGCCACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262965.12
ENST00000592628.5
ENST00000593064.5
CDS-3UTR CCA 90 bp CCAGGCCCCTGGCATCCTGTCTACGTCACGATGGCCCTCTGGTGTAATGGGGACGCTCCCGGGCGTTATTaGCCACCCGGCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PGPWHPVYVTMALWCNGDAPGRY*PPGAPS
Trigger: AGAAGGAGCGCCGGGTGGCCAATAACGCCCGGGAGC...GTCCCCATTACACCAGAGGGCCATCGTGACGTAGACAGGATGCCAGGGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262965.12
ENST00000592628.5
ENST00000593064.5
CDS-3UTR CCA 90 bp CAGGCCCCTGGCATCCTGTCTACGTCACGATGGCCCTCTGGTGTAATGGGGACAGATGCTCCCCAGCATTaGGGGAGGCTGGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: QAPGILSTSRWPSGVMGTDAPQH*GRLARP
Trigger: GGGCCTGGCCAGCCTCCCCCAATGCTGGGGAGCATC...TGTCCCCATTACACCAGAGGGCCATCGTGACGTAGACAGGATGCCAGGGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CAGACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTGGACCACACAGAGCTGGGTGCTGGGACATaGGACACAGATGGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: QTSTVPRLQPLLPLDHTELGAGT*DTDGPE
Trigger: CTCGGGCCCATCTGTGTCCCATGTCCCAGCACCCAG...CTCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CCAGGCCCACACCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGGCTCCCGCGCGTTATTaGCCATGCGCCTCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: PGPHLGATVTTALVRVELAPARY*PCASPG
Trigger: ACCGGGAGAGGCGCATGGCCAATAACGCGCGGGAGC...CAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp CCTGGCCTGGACTGGGGGCAGATACCAGGCATTGAGCTGGCCTTGAGGTTTCCCGCTCCCGCGCGTTATTaGCCATGCGCCTCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: PGLDWGQIPGIELALRFPAPARY*PCASPG
Trigger: ACCGGGAGAGGCGCATGGCCAATAACGCGCGGGAGC...GGGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTGCCCCCAGTCCAGGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp TCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGGCACGGCTCCCGCGCGTTATTaGCCATGCGCCTCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: SGSPGSPGGNGGSLRSGTAPARY*PCASPG
Trigger: ACCGGGAGAGGCGCATGGCCAATAACGCGCGGGAGC...CGTGCCACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp TGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGTGGAAACCCTGCTGCTaGGCGCGGCCGGGCACGCGG +
Preference number: 4 (lower is better)
Translates to: CPVLAPEQHPLSQSSEHEWKPCC*ARPGTR
Trigger: CCGCGTGCCCGGCCGCGCCCAGCAGCAGGGTTTCCA...CTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453954.6
CDS-3UTR TCA 90 bp GGGAGTCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGGCCGTAGTCCTCACCTaGGCTGGGTGGGTACACCGA +
Preference number: 4 (lower is better)
Translates to: GSQAVQDLLGVTVGVSGVAVVLT*AGWVHR
Trigger: TCGGTGTACCCACCCAGCTCAGGTGAGGACTACGGC...CACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGACTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp TCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCGGCTGTCGGCCCCGCTaGCAGGCGGCGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SFEFYAERTVPEAMGPLPGCRPR*QAACGW
Trigger: CCAGCCACACGCCGCCTGTCAGCGGGGCCGACAGCC...GGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp CTGGGGCAAAGGAGTGAAGGACAGGGTGTCCAGGAGGTCCCCAGCACCGGGCTCGCTCCAAGTTCAGGATaGCCGAGACAGCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: LGQRSEGQGVQEVPSTGLAPSSG*PRQPGA
Trigger: TGCACCAGGCTGTCTCGGTCATCCTGAACTTGGAGC...GAGCCCGGTGCTGGGGACCTCCTGGACACCCTGTCCTTCACTCCTTTGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262965.12
ENST00000593064.5
CDS-3UTR TCA 90 bp CCTGGCCTGGACTGGGGGCAGATACCAGGCATTGAGCTGGCCTTGAGGTTTCCCGGCATGAAGGGCACATaGAGGCCCCCAGCTAGCCAG +
Preference number: 4 (lower is better)
Translates to: PGLDWGQIPGIELALRFPGMKGT*RPPASQ
Trigger: CTGGCTAGCTGGGGGCCTTCATGTGCCCTTCATGCC...GGGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTGCCCCCAGTCCAGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CTGGGGCAAAGGAGTGAAGGACAGGGTGTCCAGGAGGTCCCCAGCACCGGGCTCGCGCTTTGTCCGACTTaGGGTGCATCTGGCACATGC +
Preference number: 4 (lower is better)
Translates to: LGQRSEGQGVQEVPSTGLALCPT*GASGTC
Trigger: GCATGTGCCAGATGCACCTCAAGTCGGACAAAGCGC...GAGCCCGGTGCTGGGGACCTCCTGGACACCCTGTCCTTCACTCCTTTGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344749.9
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp GGGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGCCAGAGTTCAGAGCATaGGCCTGGGTCCCTTTCACA +
Preference number: 4 (lower is better)
Translates to: GDTLLVLQQGRTHSPRPSPEFRA*AWVPFT
Trigger: TGTGAAAGGGACCCAGGCTCATGCTCTGAACTCTGG...CGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453954.6
ENST00000592628.5
CDS-3UTR GCA 90 bp AAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAACGCAGCCGCCGCCGCTaGCTCATCTTCCTGCGGCGG +
Preference number: 4 (lower is better)
Translates to: KPKTVPSQLGRAGYPHGKRSRRR*LIFLRR
Trigger: CCGCCGCAGGAAGATGAGGCAGCGGCGGCGGCTGCG...TTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262965.12
ENST00000588136.7
CDS-3UTR GCA 90 bp CAGACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTGGACCACACAGAGCTGAGGGGTGCAGGCTaGCATCTGCCACGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: QTSTVPRLQPLLPLDHTELRGAG*HLPRRR
Trigger: CCTTCTACGTGGCAGATGGCAGCCTGCACCCCTCAG...CTCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCTTGCTGCTTCCACTGCTaGCCACCGGGCCGCTACCGG +
Preference number: 4 (lower is better)
Translates to: SMQNAQFQRLWGHCPPRPCCFHC*PPGRYR
Trigger: CCGGTAGCGGCCCGGTGGGCAGCAGTGGAAGCAGCA...AGGTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CAGACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTGGACCACACAGAGGGCCACCAAACGTGCTaGTGCTTCCACTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: QTSTVPRLQPLLPLDHTEGHQTC*CFHCCP
Trigger: TGGGCAGCAGTGGAAGCAGCAGCACGTTTGGTGGCC...CTCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCTCCAGGCAGCAGCGTGTaGATGTCGCCGGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: SMQNAQFQRLWGHCPPRPPGSSV*MSPAVP
Trigger: GGGCACAGCCGGCGACATGCACACGCTGCTGCCTGG...AGGTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGCCTCCAACCAGGCCTGCGTaGCGCCCGCCCAGTGACATG +
Preference number: 4 (lower is better)
Translates to: PVLAPEQHPLSQSSEHEPPTRPA*RPPSDM
Trigger: CATGTCACTGGGCGGGCGGCACGCAGGCCTGGTTGG...AGGCTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCTCGTCCTCGGGGTGGCTaGCTCCAACCAGGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: SMQNAQFQRLWGHCPPRPRPRGG*LQPGLR
Trigger: ACGCAGGCCTGGTTGGAGGCAGCCACCCCGAGGACG...AGGTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGGCACGAGGGCCGCGTGGTTGTaGATGAGGCTGGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SGSPGSPGGNGGSLRSGTRAAWL*MRLVLP
Trigger: AGGCAGCACCAGCCTCATGCACAACCACGCGGCCCT...CGTGCCACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGGATGGGATCCCCCTGAGGGGAGAGGATaGGGCAGGGAAGCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: PGCHSDHCPSSCGTGWDPPEGRG*GREAPR
Trigger: CCTTGGGGCTTCCCTGCCGCATCCTCTCCCCTCAGG...GGGATCCCATCCAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CAGACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTGGACCACACAGAGACACCCTGCTGGTTCTaGAGCAGGGTCGGACGCACA +
Preference number: 4 (lower is better)
Translates to: QTSTVPRLQPLLPLDHTETPCWF*SRVGRT
Trigger: TGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGT...CTCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TCAGACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTGGACCACACAGAAGGCCCACACCTGGGTaGCACAGTGACCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: SDQHSPPAPATLALGPHRRPTPG*HSDHCP
Trigger: AGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCT...TCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGTCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGGCACGAGGCCCACACCTGGGTaGCACAGTGACCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: SGSPGSPGGNGGSLRSGTRPTPG*HSDHCP
Trigger: AGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCT...CGTGCCACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGGATGGGATCCCGGGAGACGCCCGACCTaGAGCGGGGATGAACACAGC +
Preference number: 4 (lower is better)
Translates to: PGCHSDHCPSSCGTGWDPGRRPT*SGDEHS
Trigger: GCTGTGTTCATCCCCGCTGCAGGTCGGGCGTCTCCC...GGGATCCCATCCAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp GGGAGTCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGAGCCCCAGGATGACCTaGACGGCCTGCTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: GSQAVQDLLGVTVGVSGVSPRMT*TACCRM
Trigger: CATCCTGCAGCAGGCCGTGCAGGTCATCCTGGGGCT...CACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGACTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp GGTGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGTGCTGCTGGGGGTCTTaGCGGACGGGTAGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: GVLCWLLSSILSARVQSMCCWGS*RTGRRW
Trigger: CCACCGCCTACCCGTCCGCCAAGACCCCCAGCAGCA...CATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp CCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGGATGGGATCCCGGCTGGCCAGGCCCCTaGCATCCTGTCTACGTCACG +
Preference number: 4 (lower is better)
Translates to: PGCHSDHCPSSCGTGWDPGWPGP*HPVYVT
Trigger: CGTGACGTAGACAGGATGCCAGGGGCCTGGCCAGCC...GGGATCCCATCCAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp GAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGCCCTGGGTGCTGGGACATaGGACACAGATGGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: ELALRFPLHLPWGPGSQALGAGT*DTDGPE
Trigger: CTCGGGCCCATCTGTGTCCCATGTCCCAGCACCCAG...GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CCTGGCCTGGACTGGGGGCAGATACCAGGCATTGAGCTGGCCTTGAGGTTTCCCCCCTTGCATCTACCATaGGGCCCAGGCTCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: PGLDWGQIPGIELALRFPPLHLP*GPGSQA
Trigger: GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGG...GGGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTGCCCCCAGTCCAGGCCAGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CCAGGCCCCTGGCATCCTGTCTACGTCACGATGGCCCTCTGGTGTAATGGGGACCCCTTGCATCTACCATaGGGCCCAGGCTCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: PGPWHPVYVTMALWCNGDPLHLP*GPGSQA
Trigger: GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGG...GTCCCCATTACACCAGAGGGCCATCGTGACGTAGACAGGATGCCAGGGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp GGGAGTCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGCCCTTGCATCTACCATaGGGCCCAGGCTCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: GSQAVQDLLGVTVGVSGVPLHLP*GPGSQA
Trigger: GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGG...CACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGACTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCTCCCCTCCGCCTGGCCTaGACTGGGGGCAGATACCAG +
Preference number: 4 (lower is better)
Translates to: SMQNAQFQRLWGHCPPRPPLRLA*TGGRYQ
Trigger: CTGGTATCTGCCCCCAGTCCAGGCCAGGCGGAGGGG...AGGTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp AAACAAAAGACCCGCCGCCTGTCCCCGTTCTGTCTGTGTGCAGTGGCTTCCGGGGCTCCCGCGCGTTATTaGCCATGCGCCTCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: KQKTRRLSPFCLCAVASGAPARY*PCASPG
Trigger: ACCGGGAGAGGCGCATGGCCAATAACGCGCGGGAGC...CCCGGAAGCCACTGCACACAGACAGAACGGGGACAGGCGGCGGGTCTTTTGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344749.9
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp CCTGGCCTGGACTGGGGGCAGATACCAGGCATTGAGCTGGCCTTGAGGTTTCCCCTCACCGCTCTTGCCTaGCGCTGTGCGTGCACTGAC +
Preference number: 4 (lower is better)
Translates to: PGLDWGQIPGIELALRFPLTALA*RCACTD
Trigger: GTCAGTGCACGCACAGCGCCAGGCAAGAGCGGTGAG...GGGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTGCCCCCAGTCCAGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453954.6
CDS-3UTR TCA 90 bp ACTTGCAGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACGGCTGTCGGCCCCGCTaGCAGGCGGCGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TCSFKPKTVPSQLGRAGYGCRPR*QAACGW
Trigger: CCAGCCACACGCCGCCTGTCAGCGGGGCCGACAGCC...GTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACTGCAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp AAACAAAAGACCCGCCGCCTGTCCCCGTTCTGTCTGTGTGCAGTGGCTTCCGGGCGAGTGGTCAGCCGCTaGCGTGTTCTCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: KQKTRRLSPFCLCAVASGRVVSR*RVLLVL
Trigger: GAGGACGAGGAGAACACGTCAGCGGCTGACCACTCG...CCCGGAAGCCACTGCACACAGACAGAACGGGGACAGGCGGCGGGTCTTTTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp GGTGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGGGTCAGTCCCCTTCCTaGGGGGAGAGGATGCGGCAG +
Preference number: 4 (lower is better)
Translates to: GVLCWLLSSILSARVQSMGQSPS*GERMRQ
Trigger: CTGCCGCATCCTCTCCCCTCAGGAAGGGGACTGACC...CATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp GGCATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCTCAGAGCCACCTTGCTaGCGTCCCTTCCCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: GIELALRFPLHLPWGPGSSEPPC*RPFPQA
Trigger: GGCTTGGGGGAAGGGACGTCAGCAAGGTGGCTCTGA...GGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp GGGAGTCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGCCTGGGGCAAAGGAGTaGAGGACAGGGTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GSQAVQDLLGVTVGVSGVPGAKE*RTGCPG
Trigger: TCCTGGACACCCTGTCCTTCACTCCTTTGCCCCAGG...CACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGACTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CCAGGCCCCTGGCATCCTGTCTACGTCACGATGGCCCTCTGGTGTAATGGGGACTCCTGTGCTGGCTCCTaGGCAGCATCCTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PGPWHPVYVTMALWCNGDSCAGS*AASSQP
Trigger: TGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGA...GTCCCCATTACACCAGAGGGCCATCGTGACGTAGACAGGATGCCAGGGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGAGACCTGCAGCGGGGATaGACACAGCCAGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PKTVPSQLGRAGYPHGKRDLQRG*TQPAQG
Trigger: CCCCTGGGCTGGCTGTGTTCATCCCCGCTGCAGGTC...TCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGGATGGGATCCCCGGCCTGCTGCAGGATaGGCAGCTTGGTCTGCGCTT +
Preference number: 4 (lower is better)
Translates to: PGCHSDHCPSSCGTGWDPRPAAG*AAWSAL
Trigger: AAGCGCAGACCAAGCTGCTCATCCTGCAGCAGGCCG...GGGATCCCATCCAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp CCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGAGCTCCAGCCCCAGGATaGCCTGCACGGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PKTVPSQLGRAGYPHGKRAPAPG*PARPAA
Trigger: TGCAGCAGGCCGTGCAGGTCATCCTGGGGCTGGAGC...TCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp GGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGTCCAGAGTTCAGAGCATaGGCCTGGGTCCCTTTCACA +
Preference number: 4 (lower is better)
Translates to: GTPCWFCSRVGRTAQGLRPEFRA*AWVPFT
Trigger: TGTGAAAGGGACCCAGGCTCATGCTCTGAACTCTGG...ACGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453954.6
ENST00000592628.5
CDS-3UTR GCA 90 bp CCAGGCCCCTGGCATCCTGTCTACGTCACGATGGCCCTCTGGTGTAATGGGGACCGGACCTTCTTGGGCTaGGTGTCTAGGCTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: PGPWHPVYVTMALWCNGDRTFLG*VSRLPS
Trigger: AGACGGCAGCCTAGACACGCAGCCCAAGAAGGTCCG...GTCCCCATTACACCAGAGGGCCATCGTGACGTAGACAGGATGCCAGGGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp GGTGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGGTGCAGGCTGCCATCTaGCACGTAGAAGGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GVLCWLLSSILSARVQSMVQAAI*HVEGGG
Trigger: CCCGCCCCCTTCTACGTGGCAGATGGCAGCCTGCAC...CATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CCTGGCCTGGACTGGGGGCAGATACCAGGCATTGAGCTGGCCTTGAGGTTTCCCCTGAGGGGTGCAGGCTaGCATCTGCCACGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: PGLDWGQIPGIELALRFPLRGAG*HLPRRR
Trigger: CCTTCTACGTGGCAGATGGCAGCCTGCACCCCTCAG...GGGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTGCCCCCAGTCCAGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp ATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACTGCTGCTTCCACTGCTaGCCACCGGGCCGCTACCGG +
Preference number: 4 (lower is better)
Translates to: ILCRTHSSRGYGATAHPDCCFHC*PPGRYR
Trigger: CCGGTAGCGGCCCGGTGGGCAGCAGTGGAAGCAGCA...GTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGACCAGAAAGCATGTCGCCGGCTGTaGCCACGGCGTGGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: QSPASWEELVTLMAKDQKACRRL*PRRGCG
Trigger: TCCGCAGCCACGCCGTGGGCACAGCCGGCGACATGC...TTTCTGGTCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp ATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAACCAGGCAGCAGCGTGTaGATGTCGCCGGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: IELALRFPLHLPWGPGSQPGSSV*MSPAVP
Trigger: GGGCACAGCCGGCGACATGCACACGCTGCTGCCTGG...TTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCTCCTGAGGGGAGAGGATaGGGCAGGGAAGCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: SMQNAQFQRLWGHCPPRPPEGRG*GREAPR
Trigger: CCTTGGGGCTTCCCTGCCGCATCCTCTCCCCTCAGG...AGGTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCTCCTGGGGGCCACAGCTaGTTGGCAGAGTCACCTGGG +
Preference number: 4 (lower is better)
Translates to: SMQNAQFQRLWGHCPPRPPGGHS*LAESPG
Trigger: CCCAGGTGACTCTGCCAAGCAGCTGTGGCCCCCAGG...AGGTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGCCTCCTGGGGGCCACAGCTaGTTGGCAGAGTCACCTGGG +
Preference number: 4 (lower is better)
Translates to: PVLAPEQHPLSQSSEHEPPGGHS*LAESPG
Trigger: CCCAGGTGACTCTGCCAAGCAGCTGTGGCCCCCAGG...AGGCTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGGATGGGATCCCAGGGTGTGGTCCCCATaGCAGGGGTCACTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: PGCHSDHCPSSCGTGWDPRVWSP*QGSLVP
Trigger: TGGGACCAGTGACCCCTGGCATGGGGACCACACCCT...GGGATCCCATCCAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CCTGGCCTGGACTGGGGGCAGATACCAGGCATTGAGCTGGCCTTGAGGTTTCCCACACCCTGCTGGTTCTaGAGCAGGGTCGGACGCACA +
Preference number: 4 (lower is better)
Translates to: PGLDWGQIPGIELALRFPTPCWF*SRVGRT
Trigger: TGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGT...GGGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTGCCCCCAGTCCAGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCTAGGCTATGGGGCCACTaGCCACCCAGACCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: SMQNAQFQRLWGHCPPRPRLWGH*PPRPRG
Trigger: GCCCCTAGGTCTGGGTGGGCAGTGGCCCCATAGCCT...AGGTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CAGGCCCCTGGCATCCTGTCTACGTCACGATGGCCCTCTGGTGTAATGGGGACAGCGCGTTATTGGCCATaGGCCTCTCCCGGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: QAPGILSTSRWPSGVMGTARYWP*ASPGPS
Trigger: TGAGGGACCGGGAGAGGCGCATGGCCAATAACGCGC...TGTCCCCATTACACCAGAGGGCCATCGTGACGTAGACAGGATGCCAGGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp GGGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGATGAGCAGCTTGGTCTaGGCTTTGTCCGACTTGAGG +
Preference number: 4 (lower is better)
Translates to: GDTLLVLQQGRTHSPRPSMSSLV*ALSDLR
Trigger: CCTCAAGTCGGACAAAGCGCAGACCAAGCTGCTCAT...CGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CCTGGCCTGGACTGGGGGCAGATACCAGGCATTGAGCTGGCCTTGAGGTTTCCCACCTGCACGGCCTGCTaGAGGATGAGCAGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: PGLDWGQIPGIELALRFPTCTAC*RMSSLV
Trigger: GACCAAGCTGCTCATCCTGCAGCAGGCCGTGCAGGT...GGGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTGCCCCCAGTCCAGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CCAGGCCCACACCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGACCTGCACGGCCTGCTaGAGGATGAGCAGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: PGPHLGATVTTALVRVELTCTAC*RMSSLV
Trigger: GACCAAGCTGCTCATCCTGCAGCAGGCCGTGCAGGT...CAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp GGTGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGCGCTCTCGCACCTGCTaGTCCAGCCCCAGGATGACC +
Preference number: 4 (lower is better)
Translates to: GVLCWLLSSILSARVQSMRSRTC*SSPRMT
Trigger: GGTCATCCTGGGGCTGGAGCAGCAGGTGCGAGAGCG...CATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CAGGCCCCTGGCATCCTGTCTACGTCACGATGGCCCTCTGGTGTAATGGGGACATTCCGCTCTCGCACCTaGTGCTCCAGCCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: QAPGILSTSRWPSGVMGTFRSRT*CSSPRM
Trigger: CATCCTGGGGCTGGAGCAGCAGGTGCGAGAGCGGAA...TGTCCCCATTACACCAGAGGGCCATCGTGACGTAGACAGGATGCCAGGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp GGGAGTCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGCCCATACGCTCGTGCTaGTGCAGGCCACCAAACGTG +
Preference number: 4 (lower is better)
Translates to: GSQAVQDLLGVTVGVSGVPIRSC*CRPPNV
Trigger: CACGTTTGGTGGCCTGCACCAGCACGAGCGTATGGG...CACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGACTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp ATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCTGACAGGCGGCGTGTaGCTGGAGACGCCGCCGTAC +
Preference number: 4 (lower is better)
Translates to: ILCRTHSSRGYGATAHPDLTGGV*LETPPY
Trigger: GTACGGCGGCGTCTCCAGCCACACGCCGCCTGTCAG...GTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp AAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAGGGTGCCTGGCTGGCTaGGGAGGGCCGCGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: KPKTVPSQLGRAGYPHGKGCLAG*GGPRGC
Trigger: ACAACCACGCGGCCCTCCCCAGCCAGCCAGGCACCC...TTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCGTCCTCGTCCTCGTCTaGGCTGGTCCGGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: FEFYAERTVPEAMGPLPTVLVLV*AGPGPG
Trigger: CCCCGGGCCCGGACCAGCCCAGACGAGGACGAGGAC...GGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000587425.5
ENST00000592628.5
ENST00000593064.5
CDS-3UTR CCA 90 bp GGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGTCTGTCTACGTCACGATaGCCCTCTGGTGTAATGGGG +
Preference number: 4 (lower is better)
Translates to: GTPCWFCSRVGRTAQGLRLSTSR*PSGVMG
Trigger: CCCCATTACACCAGAGGGCCATCGTGACGTAGACAG...ACGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp ATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGATGCTCCCCAGCATTaGGGGAGGCTGGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: IELALRFPLHLPWGPGSQDAPQH*GRLARP
Trigger: GGGCCTGGCCAGCCTCCCCCAATGCTGGGGAGCATC...TTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp AAACAAAAGACCCGCCGCCTGTCCCCGTTCTGTCTGTGTGCAGTGGCTTCCGGGGAGGGGACACCCTGCTaGTTCTGCAGCAGGGTCGGA +
Preference number: 4 (lower is better)
Translates to: KQKTRRLSPFCLCAVASGEGTPC*FCSRVG
Trigger: TCCGACCCTGCTGCAGAACCAGCAGGGTGTCCCCTC...CCCGGAAGCCACTGCACACAGACAGAACGGGGACAGGCGGCGGGTCTTTTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TCAGACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTGGACCACACAGAACCTGGAGAGAGGCCTaGGTGCTGGGACATGGGACA +
Preference number: 4 (lower is better)
Translates to: SDQHSPPAPATLALGPHRTWREA*VLGHGT
Trigger: TGTCCCATGTCCCAGCACCCAGGCCTCTCTCCAGGT...TCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp GGGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGCCAGCTGGGAAGAGCTaGTTACCCTCATGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: GDTLLVLQQGRTHSPRPSPAGKS*LPSWQK
Trigger: CTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGG...CGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CCAGGCCCCTGGCATCCTGTCTACGTCACGATGGCCCTCTGGTGTAATGGGGACCAGTCCCCAGCCAGCTaGGAAGAGCTGGTTACCCTC +
Preference number: 4 (lower is better)
Translates to: PGPWHPVYVTMALWCNGDQSPAS*EELVTL
Trigger: GAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTG...GTCCCCATTACACCAGAGGGCCATCGTGACGTAGACAGGATGCCAGGGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp GGGAGTCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGAGTCCAGGAGGTCACTaGGCTCCTTGTCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GSQAVQDLLGVTVGVSGVSPGGH*APCLCP
Trigger: TGGGCACAGACAAGGAGCTCAGTGACCTCCTGGACT...CACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGACTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp ATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGGGCTGTCGGCCCCGCTaGCAGGCGGCGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ISFEFYAERTVPEAMGPLGCRPR*QAACGW
Trigger: CCAGCCACACGCCGCCTGTCAGCGGGGCCGACAGCC...CAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp ATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACTGCTCGAGGCCACTGTaGCGTTCCTGCCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: ILCRTHSSRGYGATAHPDCSRPL*RSCQAL
Trigger: CAGGGCCTGGCAGGAACGTCACAGTGGCCTCGAGCA...GTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp CCCAGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTGGGGAGCGAGGCCAGTaGGTGGTAGGCCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PRNCCFFLLALGESRLNSGERGQ*VVGQGP
Trigger: GGGGCCCTGGCCTACCACTCACTGGCCTCGCTCCCC...AGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262965.12
ENST00000344749.9
CDS-3UTR TCA 90 bp TGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGGGTCAGTCCCCTTCCTaGGGGGAGAGGATGCGGCAG +
Preference number: 4 (lower is better)
Translates to: CPVLAPEQHPLSQSSEHEGQSPS*GERMRQ
Trigger: CTGCCGCATCCTCTCCCCTCAGGAAGGGGACTGACC...CTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp GGCATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCTCCTGTGCTGGCTCCTaGGCAGCATCCTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GIELALRFPLHLPWGPGSSCAGS*AASSQP
Trigger: TGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGA...GGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp GGTGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGGGCATGAAGGGCACATaGAGGCCCCCAGCTAGCCAG +
Preference number: 4 (lower is better)
Translates to: GVLCWLLSSILSARVQSMGMKGT*RPPASQ
Trigger: CTGGCTAGCTGGGGGCCTTCATGTGCCCTTCATGCC...CATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCTGGCATGAAGGGCACATaGAGGCCCCCAGCTAGCCAG +
Preference number: 4 (lower is better)
Translates to: SMQNAQFQRLWGHCPPRPGMKGT*RPPASQ
Trigger: CTGGCTAGCTGGGGGCCTTCATGTGCCCTTCATGCC...AGGTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp GGAGAGGATGCGGCAGGGAAGCCCCAAGGTGCCTTCATCAGGGAACGCCCACGCGCATTGAGCTGGCCTTaGGGTTTCCCTTGCATCTAC +
Preference number: 4 (lower is better)
Translates to: GEDAAGKPQGAFIRERPRALSWP*GFPCIY
Trigger: GTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGC...GCGTGGGCGTTCCCTGATGAAGGCACCTTGGGGCTTCCCTGCCGCATCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp GGGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGTACAGGACAGGTCTCTaGATCCACCTGAAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: GDTLLVLQQGRTHSPRPSYRTGL*IHLKEG
Trigger: ACCCTCTTTCAGGTGGATTCAGAGACCTGTCCTGTA...CGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGACCAGAAAGCTCCAGCCCCAGGATaGCCTGCACGGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: QSPASWEELVTLMAKDQKAPAPG*PARPAA
Trigger: TGCAGCAGGCCGTGCAGGTCATCCTGGGGCTGGAGC...TTTCTGGTCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CAGACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTGGACCACACAGAGGAAGAGAGGCTGCTGTaGGACTCAGTGAAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: QTSTVPRLQPLLPLDHTEEERLL*DSVKWV
Trigger: CACCCACTTCACTGAGTCGCACAGCAGCCTCTCTTC...CTCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp ATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAACTCTCCGCCGGGAGCTaGCGGAGTAGGAGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: IELALRFPLHLPWGPGSQLSAGS*RSRRGS
Trigger: ACTACCCCTCCTACTCCGGCAGCTCCCGGCGGAGAG...TTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGACCAGAAAGCTGCGTGTCTAGGCTaGCGTCTGCCGCTCTCCGCC +
Preference number: 4 (lower is better)
Translates to: QSPASWEELVTLMAKDQKAACLG*RLPLSA
Trigger: GGCGGAGAGCGGCAGACGGCAGCCTAGACACGCAGC...TTTCTGGTCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp ATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACGTGCAGGCTGCCATCTaGCACGTAGAAGGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: ILCRTHSSRGYGATAHPDVQAAI*HVEGGG
Trigger: CCCGCCCCCTTCTACGTGGCAGATGGCAGCCTGCAC...GTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp ATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACTGCTGCTGCTTCCACTaGTGCCCACCGGGCCGCTAC +
Preference number: 4 (lower is better)
Translates to: ILCRTHSSRGYGATAHPDCCCFH*CPPGRY
Trigger: GTAGCGGCCCGGTGGGCAGCAGTGGAAGCAGCAGCA...GTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CAGGCCCCTGGCATCCTGTCTACGTCACGATGGCCCTCTGGTGTAATGGGGACACACCAAACGTGCTGCTaGTTCCACTGCTGCCCACCG +
Preference number: 4 (lower is better)
Translates to: QAPGILSTSRWPSGVMGTHQTCC*FHCCPP
Trigger: CGGTGGGCAGCAGTGGAAGCAGCAGCACGTTTGGTG...TGTCCCCATTACACCAGAGGGCCATCGTGACGTAGACAGGATGCCAGGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp GGCATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCGGCCACCAAACGTGCTaGTGCTTCCACTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GIELALRFPLHLPWGPGSGHQTC*CFHCCP
Trigger: TGGGCAGCAGTGGAAGCAGCAGCACGTTTGGTGGCC...GGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCCGTCCTCGGGGTGGCTaGCTCCAACCAGGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: LNSMQNAQFQRLWGHCPPRPRGG*LQPGLR
Trigger: ACGCAGGCCTGGTTGGAGGCAGCCACCCCGAGGACG...GGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp ATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAACCCGAGGGGACACCCTaGTGGTTCTGCAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: IELALRFPLHLPWGPGSQPEGTP*WFCSRV
Trigger: GACCCTGCTGCAGAACCAGCAGGGTGTCCCCTCGGG...TTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TCAGACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTGGACCACACAGATCCACAAGGCCTCAATaGAGGGAGGGGCATGAAGGG +
Preference number: 4 (lower is better)
Translates to: SDQHSPPAPATLALGPHRSTRPQ*REGHEG
Trigger: CCCTTCATGCCCCTCCCTGCATTGAGGCCTTGTGGA...TCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGTCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CTTAAGAGATCAAACTCCCAGGGCGTAGGGGAAGCCACCGAGAAGGGAGAGGCAGGGAGACGCCCGACCTaGAGCGGGGATGAACACAGC +
Preference number: 4 (lower is better)
Translates to: LKRSNSQGVGEATEKGEAGRRPT*SGDEHS
Trigger: GCTGTGTTCATCCCCGCTGCAGGTCGGGCGTCTCCC...TGCCTCTCCCTTCTCGGTGGCTTCCCCTACGCCCTGGGAGTTTGATCTCTTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGAGGCTATGGGGCCACTaGCCACCCAGACCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: CPVLAPEQHPLSQSSEHERLWGH*PPRPRG
Trigger: GCCCCTAGGTCTGGGTGGGCAGTGGCCCCATAGCCT...CTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CTTAAGAGATCAAACTCCCAGGGCGTAGGGGAAGCCACCGAGAAGGGAGAGGCAAGGCTATGGGGCCACTaGCCACCCAGACCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: LKRSNSQGVGEATEKGEARLWGH*PPRPRG
Trigger: GCCCCTAGGTCTGGGTGGGCAGTGGCCCCATAGCCT...TGCCTCTCCCTTCTCGGTGGCTTCCCCTACGCCCTGGGAGTTTGATCTCTTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCTGCGCGTTATTGGCCATaGGCCTCTCCCGGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SMQNAQFQRLWGHCPPRPARYWP*ASPGPS
Trigger: TGAGGGACCGGGAGAGGCGCATGGCCAATAACGCGC...AGGTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CCAGGCCCCTGGCATCCTGTCTACGTCACGATGGCCCTCTGGTGTAATGGGGACTTGTCCGACTTGAGGTaGATCTGGCACATGCGCCCC +
Preference number: 4 (lower is better)
Translates to: PGPWHPVYVTMALWCNGDLSDLR*IWHMRP
Trigger: GGGGCGCATGTGCCAGATGCACCTCAAGTCGGACAA...GTCCCCATTACACCAGAGGGCCATCGTGACGTAGACAGGATGCCAGGGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp GGTGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGCCCCAGGATGACCTaGACGGCCTGCTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: GVLCWLLSSILSARVQSMSPRMT*TACCRM
Trigger: CATCCTGCAGCAGGCCGTGCAGGTCATCCTGGGGCT...CATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCTTAGCCCCAGGATGACCTaGACGGCCTGCTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: LCRTHSSRGYGATAHPDLSPRMT*TACCRM
Trigger: CATCCTGCAGCAGGCCGTGCAGGTCATCCTGGGGCT...AAGGTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592395.5
CDS-3UTR CCA 90 bp AATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACTGACAGGCGGCGTGTaGCTGGAGACGCCGCCGTAC +
Preference number: 4 (lower is better)
Translates to: NSMQNAQFQRLWGHCPPRLTGGV*LETPPY
Trigger: GTACGGCGGCGTCTCCAGCCACACGCCGCCTGTCAG...TCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp TGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGTGGCTGCGGAGCACGTaGATGGCCTCGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: CPVLAPEQHPLSQSSEHEWLRST*MASSRW
Trigger: CCACCTGGACGAGGCCATCCACGTGCTCCGCAGCCA...CTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp ATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAATGGCTGCGGAGCACGTaGATGGCCTCGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: IELALRFPLHLPWGPGSQWLRST*MASSRW
Trigger: CCACCTGGACGAGGCCATCCACGTGCTCCGCAGCCA...TTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp GGGAGTCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGTTCTCCTCCTCCGAGTaGTCAGCCGCTGACGTGTTC +
Preference number: 4 (lower is better)
Translates to: GSQAVQDLLGVTVGVSGVFSSSE*SAADVF
Trigger: GAACACGTCAGCGGCTGACCACTCGGAGGAGGAGAA...CACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGACTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp ATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACGCTCCCGGGCGTTATTaGCCACCCGGCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: ILCRTHSSRGYGATAHPDAPGRY*PPGAPS
Trigger: AGAAGGAGCGCCGGGTGGCCAATAACGCCCGGGAGC...GTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000587425.5
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
CDS-3UTR CCA 90 bp CAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGACCAGAAAGATGCTCCCCAGCATTaGGGGAGGCTGGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: QSPASWEELVTLMAKDQKDAPQH*GRLARP
Trigger: GGGCCTGGCCAGCCTCCCCCAATGCTGGGGAGCATC...TTTCTGGTCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CAGGCCCCTGGCATCCTGTCTACGTCACGATGGCCCTCTGGTGTAATGGGGACAAGCCACTCTTGCCCTTaGACCACACAGAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: QAPGILSTSRWPSGVMGTSHSCP*TTQREG
Trigger: GCCCTCCCTCTGTGTGGTCCAAGGGCAAGAGTGGCT...TGTCCCCATTACACCAGAGGGCCATCGTGACGTAGACAGGATGCCAGGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp GGCATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCAGCCACTCTTGCCCTTaGACCACACAGAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GIELALRFPLHLPWGPGSSHSCP*TTQREG
Trigger: GCCCTCCCTCTGTGTGGTCCAAGGGCAAGAGTGGCT...GGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp GGTGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGGAGGGGACACCCTGCTaGTTCTGCAGCAGGGTCGGA +
Preference number: 4 (lower is better)
Translates to: GVLCWLLSSILSARVQSMEGTPC*FCSRVG
Trigger: TCCGACCCTGCTGCAGAACCAGCAGGGTGTCCCCTC...CATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGGATGGGATCCCCAGTCCCCAGCCAGCTaGGAAGAGCTGGTTACCCTC +
Preference number: 4 (lower is better)
Translates to: PGCHSDHCPSSCGTGWDPQSPAS*EELVTL
Trigger: GAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTG...GGGATCCCATCCAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp GGTGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGGCTCCCAAGCCAGTCTaGGGAGGGGAGTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: GVLCWLLSSILSARVQSMAPKPV*GGESGS
Trigger: ACTGCCTGACTCCCCTCCCCAGACTGGCTTGGGAGC...CATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGCCTGCTCCCAAGCCAGTCTaGGGAGGGGAGTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: PVLAPEQHPLSQSSEHEPAPKPV*GGESGS
Trigger: ACTGCCTGACTCCCCTCCCCAGACTGGCTTGGGAGC...AGGCTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCTGCTCCCAAGCCAGTCTaGGGAGGGGAGTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SMQNAQFQRLWGHCPPRPAPKPV*GGESGS
Trigger: ACTGCCTGACTCCCCTCCCCAGACTGGCTTGGGAGC...AGGTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGCCTCCCTTGCATCTACCATaGGGCCCAGGCTCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: PVLAPEQHPLSQSSEHEPPLHLP*GPGSQA
Trigger: GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGG...AGGCTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp AACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAACCCCTCCGCCTGGCCTaGACTGGGGGCAGATACCAG +
Preference number: 4 (lower is better)
Translates to: NPRQSPASWEELVTLMAKPLRLA*TGGRYQ
Trigger: CTGGTATCTGCCCCCAGTCCAGGCCAGGCGGAGGGG...TTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp AATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCCCTCCGCCTGGCCTaGACTGGGGGCAGATACCAG +
Preference number: 4 (lower is better)
Translates to: NSMQNAQFQRLWGHCPPRPLRLA*TGGRYQ
Trigger: CTGGTATCTGCCCCCAGTCCAGGCCAGGCGGAGGGG...TCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR CAA 72 bp CTGGACTGGGGGCAGATACCAGGCATTGAGCTGGCCTaGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LDWGQIPGIELA*RFPLHLPWGPG
Trigger: GCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTGCCCCCAGTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp ATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGCCGTAGTCCTCACCTaGGCTGGGTGGGTACACCGA +
Preference number: 4 (lower is better)
Translates to: IELALRFPLHLPWGPGSQAVVLT*AGWVHR
Trigger: TCGGTGTACCCACCCAGCTCAGGTGAGGACTACGGC...TTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp CAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGACCAGAAATGCTCGAGGCCACTGTaGCGTTCCTGCCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: QSPASWEELVTLMAKDQKCSRPL*RSCQAL
Trigger: CAGGGCCTGGCAGGAACGTCACAGTGGCCTCGAGCA...TTTCTGGTCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp AAGCCCCAAGGTGCCTTCATCAGGGAACGCCCACGCATCACTTTCCACATGACATGCTCGAGGCCACTGTaGCGTTCCTGCCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: KPQGAFIRERPRITFHMTCSRPL*RSCQAL
Trigger: CAGGGCCTGGCAGGAACGTCACAGTGGCCTCGAGCA...TGTCATGTGGAAAGTGATGCGTGGGCGTTCCCTGATGAAGGCACCTTGGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp ACTTGCAGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTTCTCCTCCCGCTTaGTCTCGCTGGCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: TCSFKPKTVPSQLGRAGYPSPPA*SRWRPP
Trigger: CGGCGGCCGCCAGCGAGATCAAGCGGGAGGAGAAGG...GTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACTGCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGCCTTCTCCTCCCGCTTaGTCTCGCTGGCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LLALGESRLNSMQNAQFQPSPPA*SRWRPP
Trigger: CGGCGGCCGCCAGCGAGATCAAGCGGGAGGAGAAGG...CTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp ATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCGAGTGGTCAGCCGCTaGCGTGTTCTCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: ILCRTHSSRGYGATAHPDRVVSR*RVLLVL
Trigger: GAGGACGAGGAGAACACGTCAGCGGCTGACCACTCG...GTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGGGGGAGCGAGGCCAGTaGGTGGTAGGCCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: FFLLALGESRLNSMQNAQGERGQ*VVGQGP
Trigger: GGGGCCCTGGCCTACCACTCACTGGCCTCGCTCCCC...CTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262965.12
ENST00000344749.9
CDS-3UTR TCA 90 bp CAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGACCAGAAAGGTCAGTCCCCTTCCTaGGGGGAGAGGATGCGGCAG +
Preference number: 4 (lower is better)
Translates to: QSPASWEELVTLMAKDQKGQSPS*GERMRQ
Trigger: CTGCCGCATCCTCTCCCCTCAGGAAGGGGACTGACC...TTTCTGGTCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp GGTGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGCCTGGGGCAAAGGAGTaGAGGACAGGGTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GVLCWLLSSILSARVQSMPGAKE*RTGCPG
Trigger: TCCTGGACACCCTGTCCTTCACTCCTTTGCCCCAGG...CATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CCAGGCCCACACCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGGCAGATACCAGGCATTaGGCTGGCCTTGAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: PGPHLGATVTTALVRVELADTRH*AGLEVS
Trigger: GGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTGC...CAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp GAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGCCGCAGATACCAGGCATTaGGCTGGCCTTGAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: ELALRFPLHLPWGPGSQAADTRH*AGLEVS
Trigger: GGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTGC...GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGGATGGGATCCCGCGCTTTGTCCGACTTaGGGTGCATCTGGCACATGC +
Preference number: 4 (lower is better)
Translates to: PGCHSDHCPSSCGTGWDPALCPT*GASGTC
Trigger: GCATGTGCCAGATGCACCTCAAGTCGGACAAAGCGC...GGGATCCCATCCAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp TCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCGCTCCAGCCCCAGGATaGCCTGCACGGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SFEFYAERTVPEAMGPLPAPAPG*PARPAA
Trigger: TGCAGCAGGCCGTGCAGGTCATCCTGGGGCTGGAGC...GGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR TCA 90 bp GCAGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCGCGCTGTGCGTGCACTaGCCATGCCAAGGCCCACGT +
Preference number: 4 (lower is better)
Translates to: AVLNPRQSPASWEELVTLALCVH*PCQGPR
Trigger: ACGTGGGCCTTGGCATGGTCAGTGCACGCACAGCGC...GAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453954.6
CDS-3UTR GCA 90 bp AGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATCAGGCCGCCCACGCCTaGGTCTCTCCCGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SFKPKTVPSQLGRAGYPHQAAHA*VSPEGG
Trigger: GCCTCCTTCGGGAGAGACGCAGGCGTGGGCGGCCTG...ATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CCCAGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTCAGGCCGCCCACGCCTaGGTCTCTCCCGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: PRNCCFFLLALGESRLNSQAAHA*VSPEGG
Trigger: GCCTCCTTCGGGAGAGACGCAGGCGTGGGCGGCCTG...AGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp AACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAATGCTGCTGCTTCCACTaGTGCCCACCGGGCCGCTAC +
Preference number: 4 (lower is better)
Translates to: NPRQSPASWEELVTLMAKCCCFH*CPPGRY
Trigger: GTAGCGGCCCGGTGGGCAGCAGTGGAAGCAGCAGCA...TTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCTGCTGCTGCTTCCACTaGTGCCCACCGGGCCGCTAC +
Preference number: 4 (lower is better)
Translates to: LNSMQNAQFQRLWGHCPPCCCFH*CPPGRY
Trigger: GTAGCGGCCCGGTGGGCAGCAGTGGAAGCAGCAGCA...GGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCTGGCCACCAAACGTGCTaGTGCTTCCACTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SMQNAQFQRLWGHCPPRPGHQTC*CFHCCP
Trigger: TGGGCAGCAGTGGAAGCAGCAGCACGTTTGGTGGCC...AGGTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGCCTGCAGGCCACCAAACGTaGTGCTGCTTCCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: PVLAPEQHPLSQSSEHEPAGHQT*CCFHCC
Trigger: GCAGCAGTGGAAGCAGCAGCACGTTTGGTGGCCTGC...AGGCTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp AATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGATCGAGGCCAGTGCTTTaGCGAGGGCATCCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: NSMQNAQFQRLWGHCPPRSRPVL*RGHPRS
Trigger: GCTCCGGGGATGCCCTCGGCAAAGCACTGGCCTCGA...TCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCTGTAGATCGAGGCCAGTaGTTTGCCGAGGGCATCCCC +
Preference number: 4 (lower is better)
Translates to: SMQNAQFQRLWGHCPPRPVDRGQ*FAEGIP
Trigger: GGGGATGCCCTCGGCAAAGCACTGGCCTCGATCTAC...AGGTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CCAGGCCCACACCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGTCTTCTATCTTACTCTaGAGGCCGTGGAGACCCCCG +
Preference number: 4 (lower is better)
Translates to: PGPHLGATVTTALVRVELSSILL*RPWRPP
Trigger: CGGGGGTCTCCACGGCCTGCAGAGTAAGATAGAAGA...CAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCCAGGCAGCAGCGTGTaGATGTCGCCGGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: FEFYAERTVPEAMGPLPTPGSSV*MSPAVP
Trigger: GGGCACAGCCGGCGACATGCACACGCTGCTGCCTGG...GGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGAGGGCCGCGTGGTTGTaGATGAGGCTGGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: CPVLAPEQHPLSQSSEHERAAWL*MRLVLP
Trigger: AGGCAGCACCAGCCTCATGCACAACCACGCGGCCCT...CTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp ATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACAGGGCCGCGTGGTTGTaGATGAGGCTGGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: ILCRTHSSRGYGATAHPDRAAWL*MRLVLP
Trigger: AGGCAGCACCAGCCTCATGCACAACCACGCGGCCCT...GTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AAGCCCCAAGGTGCCTTCATCAGGGAACGCCCACGCATCACTTTCCACATGACACCTGAGGGGAGAGGATaGGGCAGGGAAGCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: KPQGAFIRERPRITFHMTPEGRG*GREAPR
Trigger: CCTTGGGGCTTCCCTGCCGCATCCTCTCCCCTCAGG...TGTCATGTGGAAAGTGATGCGTGGGCGTTCCCTGATGAAGGCACCTTGGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCCCTGAGGGGAGAGGATaGGGCAGGGAAGCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: FKPKTVPSQLGRAGYPHGPEGRG*GREAPR
Trigger: CCTTGGGGCTTCCCTGCCGCATCCTCTCCCCTCAGG...GCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp GGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGTCATTTCAGAGAGCTGTaGAGGTTCCAAGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: GTPCWFCSRVGRTAQGLRHFREL*RFQGRA
Trigger: TGCTCTCCCTTGGAACCTGCACAGCTCTCTGAAATG...ACGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp GGTGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGACACCCTGCTGGTTCTaGAGCAGGGTCGGACGCACA +
Preference number: 4 (lower is better)
Translates to: GVLCWLLSSILSARVQSMTPCWF*SRVGRT
Trigger: TGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGT...CATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AAGCCCCAAGGTGCCTTCATCAGGGAACGCCCACGCATCACTTTCCACATGACACCCGAGGGGACACCCTaGTGGTTCTGCAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: KPQGAFIRERPRITFHMTPEGTP*WFCSRV
Trigger: GACCCTGCTGCAGAACCAGCAGGGTGTCCCCTCGGG...TGTCATGTGGAAAGTGATGCGTGGGCGTTCCCTGATGAAGGCACCTTGGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCCGAGGGGACACCCTaGTGGTTCTGCAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: NSMQNAQFQRLWGHCPPRPEGTP*WFCSRV
Trigger: GACCCTGCTGCAGAACCAGCAGGGTGTCCCCTCGGG...TCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCCCCGAGGGGACACCCTaGTGGTTCTGCAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: FKPKTVPSQLGRAGYPHGPEGTP*WFCSRV
Trigger: GACCCTGCTGCAGAACCAGCAGGGTGTCCCCTCGGG...GCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp ATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAAGGCCCACACCTGGGTaGCACAGTGACCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: IELALRFPLHLPWGPGSQRPTPG*HSDHCP
Trigger: AGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCT...TTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGCCCGCTCACCGCTCTTaGCTGAACCTCCGAACTGCG +
Preference number: 4 (lower is better)
Translates to: CPVLAPEQHPLSQSSEHEPAHRS*LNLRTA
Trigger: CGCAGTTCGGAGGTTCAGGCAAGAGCGGTGAGCGGG...CTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344749.9
CDS-3UTR GCA 90 bp TGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGAGCCCCAGGATGACCTaGACGGCCTGCTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: CPVLAPEQHPLSQSSEHESPRMT*TACCRM
Trigger: CATCCTGCAGCAGGCCGTGCAGGTCATCCTGGGGCT...CTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCCGCTCTCGCACCTGCTaGTCCAGCCCCAGGATGACC +
Preference number: 4 (lower is better)
Translates to: LNSMQNAQFQRLWGHCPPRSRTC*SSPRMT
Trigger: GGTCATCCTGGGGCTGGAGCAGCAGGTGCGAGAGCG...GGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR GCA 90 bp GGCATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCGCCAAGGCCCACGTCTaGACATCTGTGCACAGCAGA +
Preference number: 4 (lower is better)
Translates to: GIELALRFPLHLPWGPGSAKAHV*TSVHSR
Trigger: TCTGCTGTGCACAGATGTGCAGACGTGGGCCTTGGC...GGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453954.6
CDS-3UTR CCA 90 bp ACTTGCAGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACGGGTGCCTGGCTGGCTaGGGAGGGCCGCGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: TCSFKPKTVPSQLGRAGYGCLAG*GGPRGC
Trigger: ACAACCACGCGGCCCTCCCCAGCCAGCCAGGCACCC...GTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACTGCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp GGCATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCTTCTCCTCCTCCGAGTaGTCAGCCGCTGACGTGTTC +
Preference number: 4 (lower is better)
Translates to: GIELALRFPLHLPWGPGSFSSSE*SAADVF
Trigger: GAACACGTCAGCGGCTGACCACTCGGAGGAGGAGAA...GGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGGTCCTCGTCCTCGTCTaGGCTGGTCCGGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: FFLLALGESRLNSMQNAQVLVLV*AGPGPG
Trigger: CCCCGGGCCCGGACCAGCCCAGACGAGGACGAGGAC...CTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000587425.5
ENST00000592628.5
ENST00000593064.5
CDS-3UTR CCA 90 bp CTTAAGAGATCAAACTCCCAGGGCGTAGGGGAAGCCACCGAGAAGGGAGAGGCAGGGGGTGTCCTGTGCTaGCTCCTGAGCAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: LKRSNSQGVGEATEKGEAGGVLC*LLSSIL
Trigger: GAGGATGCTGCTCAGGAGCCAGCACAGGACACCCCC...TGCCTCTCCCTTCTCGGTGGCTTCCCCTACGCCCTGGGAGTTTGATCTCTTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGCCTAGCCACTCTTGCCCTTaGACCACACAGAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PVLAPEQHPLSQSSEHEPSHSCP*TTQREG
Trigger: GCCCTCCCTCTGTGTGGTCCAAGGGCAAGAGTGGCT...AGGCTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp ATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACGAGGGGACACCCTGCTaGTTCTGCAGCAGGGTCGGA +
Preference number: 4 (lower is better)
Translates to: ILCRTHSSRGYGATAHPDEGTPC*FCSRVG
Trigger: TCCGACCCTGCTGCAGAACCAGCAGGGTGTCCCCTC...GTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp ATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGAGGGGACACCCTGCTaGTTCTGCAGCAGGGTCGGA +
Preference number: 4 (lower is better)
Translates to: IELALRFPLHLPWGPGSQEGTPC*FCSRVG
Trigger: TCCGACCCTGCTGCAGAACCAGCAGGGTGTCCCCTC...TTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGCCTACCTGGAGAGAGGCCTaGGTGCTGGGACATGGGACA +
Preference number: 4 (lower is better)
Translates to: PVLAPEQHPLSQSSEHEPTWREA*VLGHGT
Trigger: TGTCCCATGTCCCAGCACCCAGGCCTCTCTCCAGGT...AGGCTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCTCAGTCCCCAGCCAGCTaGGAAGAGCTGGTTACCCTC +
Preference number: 4 (lower is better)
Translates to: SMQNAQFQRLWGHCPPRPQSPAS*EELVTL
Trigger: GAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTG...AGGTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CCAGGCCCACACCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGTCGTGTGGAACTGGATaGGATCCCAGGGTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: PGPHLGATVTTALVRVELSCGTG*DPRVGD
Trigger: GTCTCCTACCCTGGGATCCCATCCAGTTCCACACGA...CAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp AATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGAGCTCCCGCGCGTTATTaGCCATGCGCCTCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: NSMQNAQFQRLWGHCPPRAPARY*PCASPG
Trigger: ACCGGGAGAGGCGCATGGCCAATAACGCGCGGGAGC...TCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCTAGTCCAGGAGGTCACTaGGCTCCTTGTCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SMQNAQFQRLWGHCPPRPSPGGH*APCLCP
Trigger: TGGGCACAGACAAGGAGCTCAGTGACCTCCTGGACT...AGGTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp TTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCCGGTCCTCAAGACCTaGACCTCCGAACTGCGCCCC +
Preference number: 4 (lower is better)
Translates to: FEFYAERTVPEAMGPLPTPVLKT*TSELRP
Trigger: GGGGCGCAGTTCGGAGGTTCAGGTCTTGAGGACCGG...GGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp AAGCCCCAAGGTGCCTTCATCAGGGAACGCCCACGCATCACTTTCCACATGACACGAGTGGTCAGCCGCTaGCGTGTTCTCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: KPQGAFIRERPRITFHMTRVVSR*RVLLVL
Trigger: GAGGACGAGGAGAACACGTCAGCGGCTGACCACTCG...TGTCATGTGGAAAGTGATGCGTGGGCGTTCCCTGATGAAGGCACCTTGGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCCGAGTGGTCAGCCGCTaGCGTGTTCTCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: LNSMQNAQFQRLWGHCPPRVVSR*RVLLVL
Trigger: GAGGACGAGGAGAACACGTCAGCGGCTGACCACTCG...GGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp AGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGCCAGAGCACAGGGCTaGAAGCGGGTGGCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: SFKPKTVPSQLGRAGYPHARAQG*KRVARP
Trigger: GGGACGAGCCACCCGCTTTCAGCCCTGTGCTCTGGC...ATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262965.12
ENST00000344749.9
CDS-3UTR TCA 90 bp TTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCTCAGAGCCACCTTGCTaGCGTCCCTTCCCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: LNSMQNAQFQRLWGHCPPSEPPC*RPFPQA
Trigger: GGCTTGGGGGAAGGGACGTCAGCAAGGTGGCTCTGA...GGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp GCAGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCTCAGAGCCACCTTGCTaGCGTCCCTTCCCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: AVLNPRQSPASWEELVTLSEPPC*RPFPQA
Trigger: GGCTTGGGGGAAGGGACGTCAGCAAGGTGGCTCTGA...GAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGACCAGAAATCAGAGCCACCTTGCTaGCGTCCCTTCCCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: QSPASWEELVTLMAKDQKSEPPC*RPFPQA
Trigger: GGCTTGGGGGAAGGGACGTCAGCAAGGTGGCTCTGA...TTTCTGGTCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp ATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAACCTGGGGCAAAGGAGTaGAGGACAGGGTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: IELALRFPLHLPWGPGSQPGAKE*RTGCPG
Trigger: TCCTGGACACCCTGTCCTTCACTCCTTTGCCCCAGG...TTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp ATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACTCCTGTGCTGGCTCCTaGGCAGCATCCTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: ILCRTHSSRGYGATAHPDSCAGS*AASSQP
Trigger: TGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGA...GTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp AAGCCCCAAGGTGCCTTCATCAGGGAACGCCCACGCATCACTTTCCACATGACAGGCATGAAGGGCACATaGAGGCCCCCAGCTAGCCAG +
Preference number: 4 (lower is better)
Translates to: KPQGAFIRERPRITFHMTGMKGT*RPPASQ
Trigger: CTGGCTAGCTGGGGGCCTTCATGTGCCCTTCATGCC...TGTCATGTGGAAAGTGATGCGTGGGCGTTCCCTGATGAAGGCACCTTGGGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCGACCTGCAGCGGGGATaGACACAGCCAGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SRLNSMQNAQFQRLWGHCDLQRG*TQPAQG
Trigger: CCCCTGGGCTGGCTGTGTTCATCCCCGCTGCAGGTC...GCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CCTGGCCTGGACTGGGGGCAGATACCAGGCATTGAGCTGGCCTTGAGGTTTCCCGCATTGAGCTGGCCTTaGGGTTTCCCTTGCATCTAC +
Preference number: 4 (lower is better)
Translates to: PGLDWGQIPGIELALRFPALSWP*GFPCIY
Trigger: GTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGC...GGGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTGCCCCCAGTCCAGGCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp GAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGCCGCATTGAGCTGGCCTTaGGGTTTCCCTTGCATCTAC +
Preference number: 4 (lower is better)
Translates to: ELALRFPLHLPWGPGSQAALSWP*GFPCIY
Trigger: GTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGC...GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGGATGGGATCCCGCAGATACCAGGCATTaGGCTGGCCTTGAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: PGCHSDHCPSSCGTGWDPADTRH*AGLEVS
Trigger: GGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTGC...GGGATCCCATCCAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp AAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAACGGCCTGCTGCAGGATaGGCAGCTTGGTCTGCGCTT +
Preference number: 4 (lower is better)
Translates to: KPKTVPSQLGRAGYPHGKRPAAG*AAWSAL
Trigger: AAGCGCAGACCAAGCTGCTCATCCTGCAGCAGGCCG...TTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp TTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCCGGCCTGCTGCAGGATaGGCAGCTTGGTCTGCGCTT +
Preference number: 4 (lower is better)
Translates to: FKPKTVPSQLGRAGYPHGRPAAG*AAWSAL
Trigger: AAGCGCAGACCAAGCTGCTCATCCTGCAGCAGGCCG...GCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp GCAATGCTCAGTCTAGGAACAGCAGCAGAAATAGCGAGAGACACGGGACTTTTACGCAGCCGCCGCCGCTaGCTCATCTTCCTGCGGCGG +
Preference number: 4 (lower is better)
Translates to: AMLSLGTAAEIARDTGLLRSRRR*LIFLRR
Trigger: CCGCCGCAGGAAGATGAGGCAGCGGCGGCGGCTGCG...TAAAAGTCCCGTGTCTCTCGCTATTTCTGCTGCTGTTCCTAGACTGAGCATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262965.12
ENST00000588136.7
CDS-3UTR GCA 90 bp CCAGGAGCAAAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGCAGGCCGCCCACGCCTaGGTCTCTCCCGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: PGAKQEGEASSLKRSNSQQAAHA*VSPEGG
Trigger: GCCTCCTTCGGGAGAGACGCAGGCGTGGGCGGCCTG...CTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTTTGCTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp AGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGCTGCGTGTCTAGGCTaGCGTCTGCCGCTCTCCGCC +
Preference number: 4 (lower is better)
Translates to: SFKPKTVPSQLGRAGYPHAACLG*RLPLSA
Trigger: GGCGGAGAGCGGCAGACGGCAGCCTAGACACGCAGC...ATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CCCAGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTTGCTGCTTCCACTGCTaGCCACCGGGCCGCTACCGG +
Preference number: 4 (lower is better)
Translates to: PRNCCFFLLALGESRLNSCCFHC*PPGRYR
Trigger: CCGGTAGCGGCCCGGTGGGCAGCAGTGGAAGCAGCA...AGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGCACCAAACGTGCTGCTaGTTCCACTGCTGCCCACCG +
Preference number: 4 (lower is better)
Translates to: CPVLAPEQHPLSQSSEHEHQTCC*FHCCPP
Trigger: CGGTGGGCAGCAGTGGAAGCAGCAGCACGTTTGGTG...CTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGAGGCCACCAAACGTGCTaGTGCTTCCACTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PKTVPSQLGRAGYPHGKRGHQTC*CFHCCP
Trigger: TGGGCAGCAGTGGAAGCAGCAGCACGTTTGGTGGCC...TCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CTTAAGAGATCAAACTCCCAGGGCGTAGGGGAAGCCACCGAGAAGGGAGAGGCAGCAGGCCACCAAACGTaGTGCTGCTTCCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: LKRSNSQGVGEATEKGEAAGHQT*CCFHCC
Trigger: GCAGCAGTGGAAGCAGCAGCACGTTTGGTGGCCTGC...TGCCTCTCCCTTCTCGGTGGCTTCCCCTACGCCCTGGGAGTTTGATCTCTTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGAGCAGGCCACCAAACGTaGTGCTGCTTCCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: PKTVPSQLGRAGYPHGKRAGHQT*CCFHCC
Trigger: GCAGCAGTGGAAGCAGCAGCACGTTTGGTGGCCTGC...TCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCTCGAGGCCAGTGCTTTaGCGAGGGCATCCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SFEFYAERTVPEAMGPLPSRPVL*RGHPRS
Trigger: GCTCCGGGGATGCCCTCGGCAAAGCACTGGCCTCGA...GGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCGTCCTCGGGGTGGCTaGCTCCAACCAGGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: SRLNSMQNAQFQRLWGHCRPRGG*LQPGLR
Trigger: ACGCAGGCCTGGTTGGAGGCAGCCACCCCGAGGACG...GCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCCTGGGGGCCACAGCTaGTTGGCAGAGTCACCTGGG +
Preference number: 4 (lower is better)
Translates to: FEFYAERTVPEAMGPLPTPGGHS*LAESPG
Trigger: CCCAGGTGACTCTGCCAAGCAGCTGTGGCCCCCAGG...GGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGAAGGGTGTGGTCCCCATaGCAGGGGTCACTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: NSMQNAQFQRLWGHCPPRRVWSP*QGSLVP
Trigger: TGGGACCAGTGACCCCTGGCATGGGGACCACACCCT...TCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAAGGGTGTGGTCCCCATaGCAGGGGTCACTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: NPRQSPASWEELVTLMAKRVWSP*QGSLVP
Trigger: TGGGACCAGTGACCCCTGGCATGGGGACCACACCCT...TTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCCCGAGGGGACACCCTaGTGGTTCTGCAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: FEFYAERTVPEAMGPLPTPEGTP*WFCSRV
Trigger: GACCCTGCTGCAGAACCAGCAGGGTGTCCCCTCGGG...GGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp GAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGCCTGCCACAGTGACCACTaGCCTAGTTCGTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: ELALRFPLHLPWGPGSQACHSDH*PSSCGT
Trigger: AGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCA...GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGGCACGTGCCACAGTGACCACTaGCCTAGTTCGTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: SGSPGSPGGNGGSLRSGTCHSDH*PSSCGT
Trigger: AGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCA...CGTGCCACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp GGTGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGTTGTCCGACTTGAGGTaGATCTGGCACATGCGCCCC +
Preference number: 4 (lower is better)
Translates to: GVLCWLLSSILSARVQSMLSDLR*IWHMRP
Trigger: GGGGCGCATGTGCCAGATGCACCTCAAGTCGGACAA...CATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCTAGGCTATGGGGCCACTaGCCACCCAGACCTTTCACA +
Preference number: 4 (lower is better)
Translates to: SMQNAQFQRLWGHCPPRPRLWGH*PPRPFT
Trigger: TGTGAAAGGTCTGGGTGGGCAGTGGCCCCATAGCCT...AGGTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587425.5
ENST00000592395.5
CDS-3UTR CCA 90 bp AGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATTGCTGCTGGGGGTCTTaGCGGACGGGTAGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: SFKPKTVPSQLGRAGYPHCCWGS*RTGRRW
Trigger: CCACCGCCTACCCGTCCGCCAAGACCCCCAGCAGCA...ATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp TGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGCCCATACGCTCGTGCTaGTGCAGGCCACCAAACGTG +
Preference number: 4 (lower is better)
Translates to: CPVLAPEQHPLSQSSEHEPIRSC*CRPPNV
Trigger: CACGTTTGGTGGCCTGCACCAGCACGAGCGTATGGG...CTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp TTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCGGGTGCCTGGCTGGCTaGGGAGGGCCGCGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: FLLALGESRLNSMQNAQFGCLAG*GGPRGC
Trigger: ACAACCACGCGGCCCTCCCCAGCCAGCCAGGCACCC...GAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCTTTCTCCTCCTCCGAGTaGTCAGCCGCTGACGTGTTC +
Preference number: 4 (lower is better)
Translates to: SMQNAQFQRLWGHCPPRPFSSSE*SAADVF
Trigger: GAACACGTCAGCGGCTGACCACTCGGAGGAGGAGAA...AGGTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp AGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGGTCCTCGTCCTCGTCTaGGCTGGTCCGGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: RNCCFFLLALGESRLNSMVLVLV*AGPGPG
Trigger: CCCCGGGCCCGGACCAGCCCAGACGAGGACGAGGAC...CATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000587425.5
ENST00000592628.5
ENST00000593064.5
CDS-3UTR CCA 90 bp TTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCGCTCCCGGGCGTTATTaGCCACCCGGCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FEFYAERTVPEAMGPLPTAPGRY*PPGAPS
Trigger: AGAAGGAGCGCCGGGTGGCCAATAACGCCCGGGAGC...GGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000587425.5
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
CDS-3UTR CCA 90 bp GGTGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGCACAGAGTGACACGGTaGCTGAGATTCGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: GVLCWLLSSILSARVQSMHRVTR*LRFGDR
Trigger: CCTGTCCCCGAATCTCAGCCACCGTGTCACTCTGTG...CATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262965.12
ENST00000344749.9
CDS-3UTR CCA 90 bp AAGCCCCAAGGTGCCTTCATCAGGGAACGCCCACGCATCACTTTCCACATGACAGGGGGTGTCCTGTGCTaGCTCCTGAGCAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: KPQGAFIRERPRITFHMTGGVLC*LLSSIL
Trigger: GAGGATGCTGCTCAGGAGCCAGCACAGGACACCCCC...TGTCATGTGGAAAGTGATGCGTGGGCGTTCCCTGATGAAGGCACCTTGGGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCGGGGGTGTCCTGTGCTaGCTCCTGAGCAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: LNSMQNAQFQRLWGHCPPGGVLC*LLSSIL
Trigger: GAGGATGCTGCTCAGGAGCCAGCACAGGACACCCCC...GGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CAGGCCCCTGGCATCCTGTCTACGTCACGATGGCCCTCTGGTGTAATGGGGACACTGTCTACGTCACGATaGCCCTCTGGTGTAATGGGG +
Preference number: 4 (lower is better)
Translates to: QAPGILSTSRWPSGVMGTLSTSR*PSGVMG
Trigger: CCCCATTACACCAGAGGGCCATCGTGACGTAGACAG...TGTCCCCATTACACCAGAGGGCCATCGTGACGTAGACAGGATGCCAGGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp GGCATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCTGTCTACGTCACGATaGCCCTCTGGTGTAATGGGG +
Preference number: 4 (lower is better)
Translates to: GIELALRFPLHLPWGPGSLSTSR*PSGVMG
Trigger: CCCCATTACACCAGAGGGCCATCGTGACGTAGACAG...GGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCGGCTGGCCAGGCCCCTaGCATCCTGTCTACGTCACG +
Preference number: 4 (lower is better)
Translates to: FEFYAERTVPEAMGPLPTGWPGP*HPVYVT
Trigger: CGTGACGTAGACAGGATGCCAGGGGCCTGGCCAGCC...GGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CCCAGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTGATGCTCCCCAGCATTaGGGGAGGCTGGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PRNCCFFLLALGESRLNSDAPQH*GRLARP
Trigger: GGGCCTGGCCAGCCTCCCCCAATGCTGGGGAGCATC...AGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CTTAAGAGATCAAACTCCCAGGGCGTAGGGGAAGCCACCGAGAAGGGAGAGGCAAGCCACTCTTGCCCTTaGACCACACAGAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LKRSNSQGVGEATEKGEASHSCP*TTQREG
Trigger: GCCCTCCCTCTGTGTGGTCCAAGGGCAAGAGTGGCT...TGCCTCTCCCTTCTCGGTGGCTTCCCCTACGCCCTGGGAGTTTGATCTCTTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp AACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAACTGGGTGCTGGGACATaGGACACAGATGGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: NPRQSPASWEELVTLMAKLGAGT*DTDGPE
Trigger: CTCGGGCCCATCTGTGTCCCATGTCCCAGCACCCAG...TTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGACCAGAAACTGGGTGCTGGGACATaGGACACAGATGGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: QSPASWEELVTLMAKDQKLGAGT*DTDGPE
Trigger: CTCGGGCCCATCTGTGTCCCATGTCCCAGCACCCAG...TTTCTGGTCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CTTAAGAGATCAAACTCCCAGGGCGTAGGGGAAGCCACCGAGAAGGGAGAGGCAACCTGGAGAGAGGCCTaGGTGCTGGGACATGGGACA +
Preference number: 4 (lower is better)
Translates to: LKRSNSQGVGEATEKGEATWREA*VLGHGT
Trigger: TGTCCCATGTCCCAGCACCCAGGCCTCTCTCCAGGT...TGCCTCTCCCTTCTCGGTGGCTTCCCCTACGCCCTGGGAGTTTGATCTCTTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp GGGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGAGCTGGTTACCCTCATaGCAAAAGACCAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: GDTLLVLQQGRTHSPRPSSWLPS*QKTRKG
Trigger: TCCTTTTCTGGTCTTTTGCCATGAGGGTAACCAGCT...CGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TCAGACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTGGACCACACAGACCAGCTGGGAAGAGCTaGTTACCCTCATGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: SDQHSPPAPATLALGPHRPAGKS*LPSWQK
Trigger: CTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGG...TCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGACAGTCCCCAGCCAGCTaGGAAGAGCTGGTTACCCTC +
Preference number: 4 (lower is better)
Translates to: PKTVPSQLGRAGYPHGKRQSPAS*EELVTL
Trigger: GAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTG...TCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp GGCATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCTCGTGTGGAACTGGATaGGATCCCAGGGTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: GIELALRFPLHLPWGPGSSCGTG*DPRVGD
Trigger: GTCTCCTACCCTGGGATCCCATCCAGTTCCACACGA...GGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGACCAGAAAGCTCCCAAGCCAGTCTaGGGAGGGGAGTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: QSPASWEELVTLMAKDQKAPKPV*GGESGS
Trigger: ACTGCCTGACTCCCCTCCCCAGACTGGCTTGGGAGC...TTTCTGGTCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCCCCTTGCATCTACCATaGGGCCCAGGCTCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: FKPKTVPSQLGRAGYPHGPLHLP*GPGSQA
Trigger: GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGG...GCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp ATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACAGTCCAGGAGGTCACTaGGCTCCTTGTCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: ILCRTHSSRGYGATAHPDSPGGH*APCLCP
Trigger: TGGGCACAGACAAGGAGCTCAGTGACCTCCTGGACT...GTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp ACTTGCAGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACTGCTCGAGGCCACTGTaGCGTTCCTGCCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: TCSFKPKTVPSQLGRAGYCSRPL*RSCQAL
Trigger: CAGGGCCTGGCAGGAACGTCACAGTGGCCTCGAGCA...GTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACTGCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp CCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGAGCTCCAAGTTCAGGATaGCCGAGACAGCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: PKTVPSQLGRAGYPHGKRAPSSG*PRQPGA
Trigger: TGCACCAGGCTGTCTCGGTCATCCTGAACTTGGAGC...TCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262965.12
ENST00000592628.5
ENST00000593064.5
CDS-3UTR TCA 90 bp CAGACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTGGACCACACAGAGCCACAGCATCCCCCTTaGGTGATATGTTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: QTSTVPRLQPLLPLDHTEPQHPP*VICFHF
Trigger: GAAATGGAAACATATCACTCAAGGGGGATGCTGTGG...CTCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGACCAGAAATCCTGTGCTGGCTCCTaGGCAGCATCCTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: QSPASWEELVTLMAKDQKSCAGS*AASSQP
Trigger: TGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGA...TTTCTGGTCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp GCAGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCTCCTGTGCTGGCTCCTaGGCAGCATCCTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: AVLNPRQSPASWEELVTLSCAGS*AASSQP
Trigger: TGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGA...GAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CCAGGAGCAAAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGGACCTGCAGCGGGGATaGACACAGCCAGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PGAKQEGEASSLKRSNSQDLQRG*TQPAQG
Trigger: CCCCTGGGCTGGCTGTGTTCATCCCCGCTGCAGGTC...CTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTTTGCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGGACCTGCAGCGGGGATaGACACAGCCAGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: FFLLALGESRLNSMQNAQDLQRG*TQPAQG
Trigger: CCCCTGGGCTGGCTGTGTTCATCCCCGCTGCAGGTC...CTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CAGGCCCCTGGCATCCTGTCTACGTCACGATGGCCCTCTGGTGTAATGGGGACAGCATTGAGCTGGCCTTaGGGTTTCCCTTGCATCTAC +
Preference number: 4 (lower is better)
Translates to: QAPGILSTSRWPSGVMGTALSWP*GFPCIY
Trigger: GTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGC...TGTCCCCATTACACCAGAGGGCCATCGTGACGTAGACAGGATGCCAGGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TCAGACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTGGACCACACAGATACAGGACAGGTCTCTaGATCCACCTGAAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: SDQHSPPAPATLALGPHRYRTGL*IHLKEG
Trigger: ACCCTCTTTCAGGTGGATTCAGAGACCTGTCCTGTA...TCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACCAGGCCGCCCACGCCTaGGTCTCTCCCGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: CCFFLLALGESRLNSMQNQAAHA*VSPEGG
Trigger: GCCTCCTTCGGGAGAGACGCAGGCGTGGGCGGCCTG...GTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGGCTGCGTGTCTAGGCTaGCGTCTGCCGCTCTCCGCC +
Preference number: 4 (lower is better)
Translates to: FFLLALGESRLNSMQNAQAACLG*RLPLSA
Trigger: GGCGGAGAGCGGCAGACGGCAGCCTAGACACGCAGC...CTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp AAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAACGGACCTTCTTGGGCTaGGTGTCTAGGCTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: KPKTVPSQLGRAGYPHGKRTFLG*VSRLPS
Trigger: AGACGGCAGCCTAGACACGCAGCCCAAGAAGGTCCG...TTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp ATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGTGCTGCTTCCACTGCTaGCCACCGGGCCGCTACCGG +
Preference number: 4 (lower is better)
Translates to: ISFEFYAERTVPEAMGPLCCFHC*PPGRYR
Trigger: CCGGTAGCGGCCCGGTGGGCAGCAGTGGAAGCAGCA...CAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp GCAGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCCACCAAACGTGCTGCTaGTTCCACTGCTGCCCACCG +
Preference number: 4 (lower is better)
Translates to: AVLNPRQSPASWEELVTLHQTCC*FHCCPP
Trigger: CGGTGGGCAGCAGTGGAAGCAGCAGCACGTTTGGTG...GAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGACCAGAAACACCAAACGTGCTGCTaGTTCCACTGCTGCCCACCG +
Preference number: 4 (lower is better)
Translates to: QSPASWEELVTLMAKDQKHQTCC*FHCCPP
Trigger: CGGTGGGCAGCAGTGGAAGCAGCAGCACGTTTGGTG...TTTCTGGTCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGTCGAGGCCAGTGCTTTaGCGAGGGCATCCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LLALGESRLNSMQNAQFQSRPVL*RGHPRS
Trigger: GCTCCGGGGATGCCCTCGGCAAAGCACTGGCCTCGA...CTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCTCGAGGCCAGTGCTTTaGCGAGGGCATCCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SRLNSMQNAQFQRLWGHCSRPVL*RGHPRS
Trigger: GCTCCGGGGATGCCCTCGGCAAAGCACTGGCCTCGA...GCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp AACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGTAGATCGAGGCCAGTaGTTTGCCGAGGGCATCCCC +
Preference number: 4 (lower is better)
Translates to: NPRQSPASWEELVTLMAKVDRGQ*FAEGIP
Trigger: GGGGATGCCCTCGGCAAAGCACTGGCCTCGATCTAC...TTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGCCTTCTTCTATCTTACTCTaGAGGCCGTGGAGACCCCCG +
Preference number: 4 (lower is better)
Translates to: PVLAPEQHPLSQSSEHEPSSILL*RPWRPP
Trigger: CGGGGGTCTCCACGGCCTGCAGAGTAAGATAGAAGA...AGGCTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGCGTCCTCGGGGTGGCTaGCTCCAACCAGGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: FFLLALGESRLNSMQNAQRPRGG*LQPGLR
Trigger: ACGCAGGCCTGGTTGGAGGCAGCCACCCCGAGGACG...CTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAGGGAAGCCCCAAGGTaGCTTCATCAGGGAACGCCC +
Preference number: 4 (lower is better)
Translates to: FKPKTVPSQLGRAGYPHGREAPR*LHQGTP
Trigger: GGGCGTTCCCTGATGAAGGCACCTTGGGGCTTCCCT...GCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATCCTGGGGGCCACAGCTaGTTGGCAGAGTCACCTGGG +
Preference number: 4 (lower is better)
Translates to: SFKPKTVPSQLGRAGYPHPGGHS*LAESPG
Trigger: CCCAGGTGACTCTGCCAAGCAGCTGTGGCCCCCAGG...ATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CCAGGCCCCTGGCATCCTGTCTACGTCACGATGGCCCTCTGGTGTAATGGGGACCATTTCAGAGAGCTGTaGAGGTTCCAAGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PGPWHPVYVTMALWCNGDHFREL*RFQGRA
Trigger: TGCTCTCCCTTGGAACCTGCACAGCTCTCTGAAATG...GTCCCCATTACACCAGAGGGCCATCGTGACGTAGACAGGATGCCAGGGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCAGGGTGTGGTCCCCATaGCAGGGGTCACTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: SFEFYAERTVPEAMGPLPRVWSP*QGSLVP
Trigger: TGGGACCAGTGACCCCTGGCATGGGGACCACACCCT...GGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AAGCCCCAAGGTGCCTTCATCAGGGAACGCCCACGCATCACTTTCCACATGACAACACCCTGCTGGTTCTaGAGCAGGGTCGGACGCACA +
Preference number: 4 (lower is better)
Translates to: KPQGAFIRERPRITFHMTTPCWF*SRVGRT
Trigger: TGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGT...TGTCATGTGGAAAGTGATGCGTGGGCGTTCCCTGATGAAGGCACCTTGGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGACCAGAAAACACCCTGCTGGTTCTaGAGCAGGGTCGGACGCACA +
Preference number: 4 (lower is better)
Translates to: QSPASWEELVTLMAKDQKTPCWF*SRVGRT
Trigger: TGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGT...TTTCTGGTCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AAACAAAAGACCCGCCGCCTGTCCCCGTTCTGTCTGTGTGCAGTGGCTTCCGGGTGCCACAGTGACCACTaGCCTAGTTCGTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: KQKTRRLSPFCLCAVASGCHSDH*PSSCGT
Trigger: AGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCA...CCCGGAAGCCACTGCACACAGACAGAACGGGGACAGGCGGCGGGTCTTTTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGGGCGTAGGGAGGCTATGGGGCCACTaGCCACCCAGACCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: KQEGEASSLKRSNSQGVGRLWGH*PPRPRG
Trigger: GCCCCTAGGTCTGGGTGGGCAGTGGCCCCATAGCCT...CCCTACGCCCTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCAGCCCCAGGATGACCTaGACGGCCTGCTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: SFEFYAERTVPEAMGPLPSPRMT*TACCRM
Trigger: CATCCTGCAGCAGGCCGTGCAGGTCATCCTGGGGCT...GGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CCCAGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTCGCTCTCGCACCTGCTaGTCCAGCCCCAGGATGACC +
Preference number: 4 (lower is better)
Translates to: PRNCCFFLLALGESRLNSRSRTC*SSPRMT
Trigger: GGTCATCCTGGGGCTGGAGCAGCAGGTGCGAGAGCG...AGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGCGCTCTCGCACCTGCTaGTCCAGCCCCAGGATGACC +
Preference number: 4 (lower is better)
Translates to: LLALGESRLNSMQNAQFQRSRTC*SSPRMT
Trigger: GGTCATCCTGGGGCTGGAGCAGCAGGTGCGAGAGCG...CTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTGCTGCTGGGGGTCTTaGCGGACGGGTAGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: FFLLALGESRLNSMQNAQCCWGS*RTGRRW
Trigger: CCACCGCCTACCCGTCCGCCAAGACCCCCAGCAGCA...CTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp AATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCCATACGCTCGTGCTaGTGCAGGCCACCAAACGTG +
Preference number: 4 (lower is better)
Translates to: NSMQNAQFQRLWGHCPPRPIRSC*CRPPNV
Trigger: CACGTTTGGTGGCCTGCACCAGCACGAGCGTATGGG...TCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp AAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGGGCGTAGGGTGGCTGCGGAGCACGTaGATGGCCTCGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KQEGEASSLKRSNSQGVGWLRST*MASSRW
Trigger: CCACCTGGACGAGGCCATCCACGTGCTCCGCAGCCA...CCCTACGCCCTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp CTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGTGGCTGCGGAGCACGTaGATGGCCTCGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LLALGESRLNSMQNAQFQWLRST*MASSRW
Trigger: CCACCTGGACGAGGCCATCCACGTGCTCCGCAGCCA...CTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp TGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGTTCTCCTCCTCCGAGTaGTCAGCCGCTGACGTGTTC +
Preference number: 4 (lower is better)
Translates to: CPVLAPEQHPLSQSSEHEFSSSE*SAADVF
Trigger: GAACACGTCAGCGGCTGACCACTCGGAGGAGGAGAA...CTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGCACAGAGTGACACGGTaGCTGAGATTCGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: CPVLAPEQHPLSQSSEHEHRVTR*LRFGDR
Trigger: CCTGTCCCCGAATCTCAGCCACCGTGTCACTCTGTG...CTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262965.12
ENST00000344749.9
CDS-3UTR CCA 90 bp TCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCTCTGTCTACGTCACGATaGCCCTCTGGTGTAATGGGG +
Preference number: 4 (lower is better)
Translates to: SMQNAQFQRLWGHCPPRPLSTSR*PSGVMG
Trigger: CCCCATTACACCAGAGGGCCATCGTGACGTAGACAG...AGGTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp ACTTGCAGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACGGCTGGCCAGGCCCCTaGCATCCTGTCTACGTCACG +
Preference number: 4 (lower is better)
Translates to: TCSFKPKTVPSQLGRAGYGWPGP*HPVYVT
Trigger: CGTGACGTAGACAGGATGCCAGGGGCCTGGCCAGCC...GTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACTGCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp AAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGGGCGTAGGGGGCTGGCCAGGCCCCTaGCATCCTGTCTACGTCACG +
Preference number: 4 (lower is better)
Translates to: KQEGEASSLKRSNSQGVGGWPGP*HPVYVT
Trigger: CGTGACGTAGACAGGATGCCAGGGGCCTGGCCAGCC...CCCTACGCCCTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp ATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGGATGCTCCCCAGCATTaGGGGAGGCTGGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: ISFEFYAERTVPEAMGPLDAPQH*GRLARP
Trigger: GGGCCTGGCCAGCCTCCCCCAATGCTGGGGAGCATC...CAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCGATGCTCCCCAGCATTaGGGGAGGCTGGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: FLLALGESRLNSMQNAQFDAPQH*GRLARP
Trigger: GGGCCTGGCCAGCCTCCCCCAATGCTGGGGAGCATC...GAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGACCAGAAAAGCCACTCTTGCCCTTaGACCACACAGAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: QSPASWEELVTLMAKDQKSHSCP*TTQREG
Trigger: GCCCTCCCTCTGTGTGGTCCAAGGGCAAGAGTGGCT...TTTCTGGTCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp AACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAACCTGGAGAGAGGCCTaGGTGCTGGGACATGGGACA +
Preference number: 4 (lower is better)
Translates to: NPRQSPASWEELVTLMAKTWREA*VLGHGT
Trigger: TGTCCCATGTCCCAGCACCCAGGCCTCTCTCCAGGT...TTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp AAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAACCTGGAGAGAGGCCTaGGTGCTGGGACATGGGACA +
Preference number: 4 (lower is better)
Translates to: KPKTVPSQLGRAGYPHGKTWREA*VLGHGT
Trigger: TGTCCCATGTCCCAGCACCCAGGCCTCTCTCCAGGT...TTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp AACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAACAGTCCCCAGCCAGCTaGGAAGAGCTGGTTACCCTC +
Preference number: 4 (lower is better)
Translates to: NPRQSPASWEELVTLMAKQSPAS*EELVTL
Trigger: GAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTG...TTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCGCTCCCAAGCCAGTCTaGGGAGGGGAGTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: FEFYAERTVPEAMGPLPTAPKPV*GGESGS
Trigger: ACTGCCTGACTCCCCTCCCCAGACTGGCTTGGGAGC...GGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
3UTR CAA 72 bp CAGATACCAGGCATTGAGCTGGCCTTGAGGTTTCCCTaGCATCTACCATGGGGCCCAGGCTCCCAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: QIPGIELALRFP*HLPWGPGSQAS
Trigger: ACTGGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp AATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGAAGTCCAGGAGGTCACTaGGCTCCTTGTCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: NSMQNAQFQRLWGHCPPRSPGGH*APCLCP
Trigger: TGGGCACAGACAAGGAGCTCAGTGACCTCCTGGACT...TCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp AAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGGGCGTAGGGGCCGTAGTCCTCACCTaGGCTGGGTGGGTACACCGA +
Preference number: 4 (lower is better)
Translates to: KQEGEASSLKRSNSQGVGAVVLT*AGWVHR
Trigger: TCGGTGTACCCACCCAGCTCAGGTGAGGACTACGGC...CCCTACGCCCTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp TTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCGCTCCAAGTTCAGGATaGCCGAGACAGCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: LNSMQNAQFQRLWGHCPPAPSSG*PRQPGA
Trigger: TGCACCAGGCTGTCTCGGTCATCCTGAACTTGGAGC...GGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000587425.5
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
CDS-3UTR TCA 90 bp TGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCAGCCAGAGCACAGGGCTaGAAGCGGGTGGCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: CFFLLALGESRLNSMQNAARAQG*KRVARP
Trigger: GGGACGAGCCACCCGCTTTCAGCCCTGTGCTCTGGC...TGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262965.12
ENST00000344749.9
CDS-3UTR TCA 90 bp CCAGGCCCACACCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGGCATCACTTTCCACATaGCAAAACCAAGAGAACCCC +
Preference number: 4 (lower is better)
Translates to: PGPHLGATVTTALVRVELASLST*QNQENP
Trigger: GGGGTTCTCTTGGTTTTGTCATGTGGAAAGTGATGC...CAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CCAGGAGCAAAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGGGTCAGTCCCCTTCCTaGGGGGAGAGGATGCGGCAG +
Preference number: 4 (lower is better)
Translates to: PGAKQEGEASSLKRSNSQGQSPS*GERMRQ
Trigger: CTGCCGCATCCTCTCCCCTCAGGAAGGGGACTGACC...CTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTTTGCTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCTCCTGTGCTGGCTCCTaGGCAGCATCCTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: FEFYAERTVPEAMGPLPTSCAGS*AASSQP
Trigger: TGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGA...GGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp AGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGGACCTGCAGCGGGGATaGACACAGCCAGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RNCCFFLLALGESRLNSMDLQRG*TQPAQG
Trigger: CCCCTGGGCTGGCTGTGTTCATCCCCGCTGCAGGTC...CATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CTTAAGAGATCAAACTCCCAGGGCGTAGGGGAAGCCACCGAGAAGGGAGAGGCAGCAGATACCAGGCATTaGGCTGGCCTTGAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: LKRSNSQGVGEATEKGEAADTRH*AGLEVS
Trigger: GGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTGC...TGCCTCTCCCTTCTCGGTGGCTTCCCCTACGCCCTGGGAGTTTGATCTCTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGAGCAGATACCAGGCATTaGGCTGGCCTTGAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: PKTVPSQLGRAGYPHGKRADTRH*AGLEVS
Trigger: GGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTGC...TCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGGATGGGATCCCCCTCCTCGCGCTGGGTaGATCTCGTTTGAATTCTAT +
Preference number: 4 (lower is better)
Translates to: PGCHSDHCPSSCGTGWDPPPRAG*ISFEFY
Trigger: ATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGG...GGGATCCCATCCAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CAGACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTGGACCACACAGAGGTCTCTGAATCCACCTaGAAGAGGGTCGTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: QTSTVPRLQPLLPLDHTEVSEST*KRVVLK
Trigger: CTTTAAAACGACCCTCTTTCAGGTGGATTCAGAGAC...CTCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCGGCCACCAAACGTGCTaGTGCTTCCACTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SFEFYAERTVPEAMGPLPGHQTC*CFHCCP
Trigger: TGGGCAGCAGTGGAAGCAGCAGCACGTTTGGTGGCC...GGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp AGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCCAACCAGGCCTGCGTaGCGCCCGCCCAGTGACATG +
Preference number: 4 (lower is better)
Translates to: RNCCFFLLALGESRLNSMPTRPA*RPPSDM
Trigger: CATGTCACTGGGCGGGCGGCACGCAGGCCTGGTTGG...CATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp AGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATAGGGCCGCGTGGTTGTaGATGAGGCTGGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SFKPKTVPSQLGRAGYPHRAAWL*MRLVLP
Trigger: AGGCAGCACCAGCCTCATGCACAACCACGCGGCCCT...ATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp GGGAGTCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGCTGGTCCCAACAAAATaGCCCATTTCAGAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GSQAVQDLLGVTVGVSGVLVPTK*PISESC
Trigger: ACAGCTCTCTGAAATGGGGCATTTTGTTGGGACCAG...CACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGACTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AAGCCCCAAGGTGCCTTCATCAGGGAACGCCCACGCATCACTTTCCACATGACATCCACAAGGCCTCAATaGAGGGAGGGGCATGAAGGG +
Preference number: 4 (lower is better)
Translates to: KPQGAFIRERPRITFHMTSTRPQ*REGHEG
Trigger: CCCTTCATGCCCCTCCCTGCATTGAGGCCTTGTGGA...TGTCATGTGGAAAGTGATGCGTGGGCGTTCCCTGATGAAGGCACCTTGGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CCCAGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTGCGCGTTATTGGCCATaGGCCTCTCCCGGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: PRNCCFFLLALGESRLNSARYWP*ASPGPS
Trigger: TGAGGGACCGGGAGAGGCGCATGGCCAATAACGCGC...AGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGTTCCGCTCTCGCACCTaGTGCTCCAGCCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: LLALGESRLNSMQNAQFQFRSRT*CSSPRM
Trigger: CATCCTGGGGCTGGAGCAGCAGGTGCGAGAGCGGAA...CTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CCCAGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTTTCCGCTCTCGCACCTaGTGCTCCAGCCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: PRNCCFFLLALGESRLNSFRSRT*CSSPRM
Trigger: CATCCTGGGGCTGGAGCAGCAGGTGCGAGAGCGGAA...AGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCACGTCTGCACATCTGTaGACAGCAGAGGGACCGCAC +
Preference number: 4 (lower is better)
Translates to: FKPKTVPSQLGRAGYPHGTSAHL*TAEGPH
Trigger: GTGCGGTCCCTCTGCTGTGCACAGATGTGCAGACGT...GCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453954.6
CDS-3UTR GCA 90 bp CCAGGAGCAAAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGGCCTGGCGCTGTGCGTaGACTGACCATGCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: PGAKQEGEASSLKRSNSQAWRCA*TDHAKA
Trigger: GGCCTTGGCATGGTCAGTGCACGCACAGCGCCAGGC...CTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTTTGCTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453954.6
CDS-3UTR CCA 90 bp TTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCTGCGACTCAGTGAAGTaGGTGCCCTCGCTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: FKPKTVPSQLGRAGYPHGCDSVK*VPSLKV
Trigger: GACCTTCAGCGAGGGCACCCACTTCACTGAGTCGCA...GCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp ATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCGGACGGGTAGGCGGTaGCATCCCTGCCGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: ISFEFYAERTVPEAMGPLRTGRR*HPCRSP
Trigger: AGGACTACGGCAGGGATGCCACCGCCTACCCGTCCG...CAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp TCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCCCCATACGCTCGTGCTaGTGCAGGCCACCAAACGTG +
Preference number: 4 (lower is better)
Translates to: SFEFYAERTVPEAMGPLPPIRSC*CRPPNV
Trigger: CACGTTTGGTGGCCTGCACCAGCACGAGCGTATGGG...GGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp TTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCTTCTCCTCCTCCGAGTaGTCAGCCGCTGACGTGTTC +
Preference number: 4 (lower is better)
Translates to: FKPKTVPSQLGRAGYPHGFSSSE*SAADVF
Trigger: GAACACGTCAGCGGCTGACCACTCGGAGGAGGAGAA...GCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCGTCCTCGTCCTCGTCTaGGCTGGTCCGGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLVLVLV*AGPGPG
Trigger: CCCCGGGCCCGGACCAGCCCAGACGAGGACGAGGAC...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262965.12
ENST00000593064.5
ENST00000651991.1
CDS-3UTR CCA 90 bp TTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCGCTCCCGGGCGTTATTaGCCACCCGGCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FLLALGESRLNSMQNAQFAPGRY*PPGAPS
Trigger: AGAAGGAGCGCCGGGTGGCCAATAACGCCCGGGAGC...GAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000587425.5
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
CDS-3UTR CCA 90 bp AAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGGGCGTAGGGGGGGGTGTCCTGTGCTaGCTCCTGAGCAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: KQEGEASSLKRSNSQGVGGGVLC*LLSSIL
Trigger: GAGGATGCTGCTCAGGAGCCAGCACAGGACACCCCC...CCCTACGCCCTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTT
57% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp ACTTGCAGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACGGGGGTGTCCTGTGCTaGCTCCTGAGCAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: TCSFKPKTVPSQLGRAGYGGVLC*LLSSIL
Trigger: GAGGATGCTGCTCAGGAGCCAGCACAGGACACCCCC...GTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACTGCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp ATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGGGCTGGCCAGGCCCCTaGCATCCTGTCTACGTCACG +
Preference number: 4 (lower is better)
Translates to: ISFEFYAERTVPEAMGPLGWPGP*HPVYVT
Trigger: CGTGACGTAGACAGGATGCCAGGGGCCTGGCCAGCC...CAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGCTGGGTGCTGGGACATaGGACACAGATGGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: LLALGESRLNSMQNAQFQLGAGT*DTDGPE
Trigger: CTCGGGCCCATCTGTGTCCCATGTCCCAGCACCCAG...CTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CAGACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTGGACCACACAGAGAGCTGGTTACCCTCATaGCAAAAGACCAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: QTSTVPRLQPLLPLDHTESWLPS*QKTRKG
Trigger: TCCTTTTCTGGTCTTTTGCCATGAGGGTAACCAGCT...CTCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp GGTGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGCCAGCTGGGAAGAGCTaGTTACCCTCATGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: GVLCWLLSSILSARVQSMPAGKS*LPSWQK
Trigger: CTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGG...CATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp ATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACTCGTGTGGAACTGGATaGGATCCCAGGGTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: ILCRTHSSRGYGATAHPDSCGTG*DPRVGD
Trigger: GTCTCCTACCCTGGGATCCCATCCAGTTCCACACGA...GTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACCCCCTCCGCCTGGCCTaGACTGGGGGCAGATACCAG +
Preference number: 4 (lower is better)
Translates to: CCFFLLALGESRLNSMQNPLRLA*TGGRYQ
Trigger: CTGGTATCTGCCCCCAGTCCAGGCCAGGCGGAGGGG...GTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACCGGTCCTCAAGACCTaGACCTCCGAACTGCGCCCC +
Preference number: 4 (lower is better)
Translates to: CFFLLALGESRLNSMQNAPVLKT*TSELRP
Trigger: GGGGCGCAGTTCGGAGGTTCAGGTCTTGAGGACCGG...TGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp TTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGGCCGTAGTCCTCACCTaGGCTGGGTGGGTACACCGA +
Preference number: 4 (lower is better)
Translates to: FFLLALGESRLNSMQNAQAVVLT*AGWVHR
Trigger: TCGGTGTACCCACCCAGCTCAGGTGAGGACTACGGC...CTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCCCTTCTCCTCCCGCTTaGTCTCGCTGGCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLPSPPA*SRWRPP
Trigger: CGGCGGCCGCCAGCGAGATCAAGCGGGAGGAGAAGG...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000590436.5
ENST00000590684.5
ENST00000593064.5
ENST00000611869.5
ENST00000651991.1
CDS-3UTR TCA 90 bp ATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCGAGTGGTCAGCCGCTaGCGTGTTCTCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: ISFEFYAERTVPEAMGPLRVVSR*RVLLVL
Trigger: GAGGACGAGGAGAACACGTCAGCGGCTGACCACTCG...CAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CCAGGAGCAAAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGCGAGTGGTCAGCCGCTaGCGTGTTCTCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: PGAKQEGEASSLKRSNSQRVVSR*RVLLVL
Trigger: GAGGACGAGGAGAACACGTCAGCGGCTGACCACTCG...CTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTTTGCTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCGCTCCAAGTTCAGGATaGCCGAGACAGCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: FEFYAERTVPEAMGPLPTAPSSG*PRQPGA
Trigger: TGCACCAGGCTGTCTCGGTCATCCTGAACTTGGAGC...GGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000587425.5
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
CDS-3UTR TCA 90 bp GGCATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCGCATCACTTTCCACATaGCAAAACCAAGAGAACCCC +
Preference number: 4 (lower is better)
Translates to: GIELALRFPLHLPWGPGSASLST*QNQENP
Trigger: GGGGTTCTCTTGGTTTTGTCATGTGGAAAGTGATGC...GGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCTCCTGTGCTGGCTCCTaGGCAGCATCCTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SRLNSMQNAQFQRLWGHCSCAGS*AASSQP
Trigger: TGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGA...GCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGGGCATGAAGGGCACATaGAGGCCCCCAGCTAGCCAG +
Preference number: 4 (lower is better)
Translates to: FFLLALGESRLNSMQNAQGMKGT*RPPASQ
Trigger: CTGGCTAGCTGGGGGCCTTCATGTGCCCTTCATGCC...CTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCGGCATGAAGGGCACATaGAGGCCCCCAGCTAGCCAG +
Preference number: 4 (lower is better)
Translates to: FLLALGESRLNSMQNAQFGMKGT*RPPASQ
Trigger: CTGGCTAGCTGGGGGCCTTCATGTGCCCTTCATGCC...GAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp ATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACGCATTGAGCTGGCCTTaGGGTTTCCCTTGCATCTAC +
Preference number: 4 (lower is better)
Translates to: ILCRTHSSRGYGATAHPDALSWP*GFPCIY
Trigger: GTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGC...GTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TCAGACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTGGACCACACAGATGGGTGAATCTCGTTTaGATTCTATGCAGAACGCAC +
Preference number: 4 (lower is better)
Translates to: SDQHSPPAPATLALGPHRWVNLV*ILCRTH
Trigger: GTGCGTTCTGCATAGAATTCAAACGAGATTCACCCA...TCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCTTACAGGACAGGTCTCTaGATCCACCTGAAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: SMQNAQFQRLWGHCPPRPYRTGL*IHLKEG
Trigger: ACCCTCTTTCAGGTGGATTCAGAGACCTGTCCTGTA...AGGTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CCAGGAGCAAAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGCGGCCTGCTGCAGGATaGGCAGCTTGGTCTGCGCTT +
Preference number: 4 (lower is better)
Translates to: PGAKQEGEASSLKRSNSQRPAAG*AAWSAL
Trigger: AAGCGCAGACCAAGCTGCTCATCCTGCAGCAGGCCG...CTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTTTGCTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp TTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGCGGCCTGCTGCAGGATaGGCAGCTTGGTCTGCGCTT +
Preference number: 4 (lower is better)
Translates to: FFLLALGESRLNSMQNAQRPAAG*AAWSAL
Trigger: AAGCGCAGACCAAGCTGCTCATCCTGCAGCAGGCCG...CTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCGAAGAGAGGCTGCTGTaGGACTCAGTGAAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LNSMQNAQFQRLWGHCPPEERLL*DSVKWV
Trigger: CACCCACTTCACTGAGTCGCACAGCAGCCTCTCTTC...GGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp AGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCTCTCCGCCGGGAGCTaGCGGAGTAGGAGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: RNCCFFLLALGESRLNSMLSAGS*RSRRGS
Trigger: ACTACCCCTCCTACTCCGGCAGCTCCCGGCGGAGAG...CATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp ACTTGCAGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCTGAGGGGTGCAGGCTaGCATCTGCCACGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: TCSFKPKTVPSQLGRAGYLRGAG*HLPRRR
Trigger: CCTTCTACGTGGCAGATGGCAGCCTGCACCCCTCAG...GTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACTGCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCGTAGATCGAGGCCAGTaGTTTGCCGAGGGCATCCCC +
Preference number: 4 (lower is better)
Translates to: SRLNSMQNAQFQRLWGHCVDRGQ*FAEGIP
Trigger: GGGGATGCCCTCGGCAAAGCACTGGCCTCGATCTAC...GCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp GCAGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCTCTTCTATCTTACTCTaGAGGCCGTGGAGACCCCCG +
Preference number: 4 (lower is better)
Translates to: AVLNPRQSPASWEELVTLSSILL*RPWRPP
Trigger: CGGGGGTCTCCACGGCCTGCAGAGTAAGATAGAAGA...GAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCGCATGTCGCCGGCTGTaGCCACGGCGTGGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLACRRL*PRRGCG
Trigger: TCCGCAGCCACGCCGTGGGCACAGCCGGCGACATGC...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000590436.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGGGCGTAGGGAGGGAAGCCCCAAGGTaGCTTCATCAGGGAACGCCC +
Preference number: 4 (lower is better)
Translates to: KQEGEASSLKRSNSQGVGREAPR*LHQGTP
Trigger: GGGCGTTCCCTGATGAAGGCACCTTGGGGCTTCCCT...CCCTACGCCCTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCCTGGGGGCCACAGCTaGTTGGCAGAGTCACCTGGG +
Preference number: 4 (lower is better)
Translates to: RNCCFFLLALGESRLNSMPGGHS*LAESPG
Trigger: CCCAGGTGACTCTGCCAAGCAGCTGTGGCCCCCAGG...CATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACCCCGAGGGGACACCCTaGTGGTTCTGCAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: CCFFLLALGESRLNSMQNPEGTP*WFCSRV
Trigger: GACCCTGCTGCAGAACCAGCAGGGTGTCCCCTCGGG...GTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGGGGAGACGCCCGACCTaGAGCGGGGATGAACACAGC +
Preference number: 4 (lower is better)
Translates to: RNCCFFLLALGESRLNSMGRRPT*SGDEHS
Trigger: GCTGTGTTCATCCCCGCTGCAGGTCGGGCGTCTCCC...CATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCAGGGAGACGCCCGACCTaGAGCGGGGATGAACACAGC +
Preference number: 4 (lower is better)
Translates to: CFFLLALGESRLNSMQNAGRRPT*SGDEHS
Trigger: GCTGTGTTCATCCCCGCTGCAGGTCGGGCGTCTCCC...TGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp ATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGGCGCGTTATTGGCCATaGGCCTCTCCCGGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: ISFEFYAERTVPEAMGPLARYWP*ASPGPS
Trigger: TGAGGGACCGGGAGAGGCGCATGGCCAATAACGCGC...CAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCACCTGCACGGCCTGCTaGAGGATGAGCAGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: SRLNSMQNAQFQRLWGHCTCTAC*RMSSLV
Trigger: GACCAAGCTGCTCATCCTGCAGCAGGCCGTGCAGGT...GCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATACCTGCACGGCCTGCTaGAGGATGAGCAGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: SFKPKTVPSQLGRAGYPHTCTAC*RMSSLV
Trigger: GACCAAGCTGCTCATCCTGCAGCAGGCCGTGCAGGT...ATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp GCAATGCTCAGTCTAGGAACAGCAGCAGAAATAGCGAGAGACACGGGACTTTTACGCTCTCGCACCTGCTaGTCCAGCCCCAGGATGACC +
Preference number: 4 (lower is better)
Translates to: AMLSLGTAAEIARDTGLLRSRTC*SSPRMT
Trigger: GGTCATCCTGGGGCTGGAGCAGCAGGTGCGAGAGCG...TAAAAGTCCCGTGTCTCTCGCTATTTCTGCTGCTGTTCCTAGACTGAGCATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCGCTCTCGCACCTaGTGCTCCAGCCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: FFLLALGESRLNSMQNAQFRSRT*CSSPRM
Trigger: CATCCTGGGGCTGGAGCAGCAGGTGCGAGAGCGGAA...CTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCGCGTGGGGAGACGGGTaGATCAGGGGGAGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLAWGDG*IRGSRV
Trigger: GACCCGGCTCCCCCTGATGCACCCGTCTCCCCACGC...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590436.5
CDS-3UTR CCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCGGGTGCCTGGCTGGCTaGGGAGGGCCGCGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLGCLAG*GGPRGC
Trigger: ACAACCACGCGGCCCTCCCCAGCCAGCCAGGCACCC...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000590436.5
ENST00000590684.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCTTCTCCTCCTCCGAGTaGTCAGCCGCTGACGTGTTC +
Preference number: 4 (lower is better)
Translates to: SFEFYAERTVPEAMGPLPFSSSE*SAADVF
Trigger: GAACACGTCAGCGGCTGACCACTCGGAGGAGGAGAA...GGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp ATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCGAACCTTGTCAGGTTaGTGTTGGCTCGATGCTGAC +
Preference number: 4 (lower is better)
Translates to: ILCRTHSSRGYGATAHPDRTLSG*CWLDAD
Trigger: GTCAGCATCGAGCCAACACCAACCTGACAAGGTTCG...GTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262965.12
ENST00000344749.9
CDS-3UTR CCA 90 bp CCAGGAGCAAAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGGGGGGTGTCCTGTGCTaGCTCCTGAGCAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: PGAKQEGEASSLKRSNSQGGVLC*LLSSIL
Trigger: GAGGATGCTGCTCAGGAGCCAGCACAGGACACCCCC...CTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTTTGCTCCTGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCCTGTCTACGTCACGATaGCCCTCTGGTGTAATGGGG +
Preference number: 4 (lower is better)
Translates to: LNSMQNAQFQRLWGHCPPLSTSR*PSGVMG
Trigger: CCCCATTACACCAGAGGGCCATCGTGACGTAGACAG...GGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGGCTGGCCAGGCCCCTaGCATCCTGTCTACGTCACG +
Preference number: 4 (lower is better)
Translates to: CCFFLLALGESRLNSMQNGWPGP*HPVYVT
Trigger: CGTGACGTAGACAGGATGCCAGGGGCCTGGCCAGCC...GTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp AGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATAGCCACTCTTGCCCTTaGACCACACAGAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SFKPKTVPSQLGRAGYPHSHSCP*TTQREG
Trigger: GCCCTCCCTCTGTGTGGTCCAAGGGCAAGAGTGGCT...ATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CCCAGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTAGCCACTCTTGCCCTTaGACCACACAGAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PRNCCFFLLALGESRLNSSHSCP*TTQREG
Trigger: GCCCTCCCTCTGTGTGGTCCAAGGGCAAGAGTGGCT...AGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CCCAGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTACCTGGAGAGAGGCCTaGGTGCTGGGACATGGGACA +
Preference number: 4 (lower is better)
Translates to: PRNCCFFLLALGESRLNSTWREA*VLGHGT
Trigger: TGTCCCATGTCCCAGCACCCAGGCCTCTCTCCAGGT...AGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CCAGGCCCCTGGCATCCTGTCTACGTCACGATGGCCCTCTGGTGTAATGGGGACAGCTGGTTACCCTCATaGCAAAAGACCAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: PGPWHPVYVTMALWCNGDSWLPS*QKTRKG
Trigger: TCCTTTTCTGGTCTTTTGCCATGAGGGTAACCAGCT...GTCCCCATTACACCAGAGGGCCATCGTGACGTAGACAGGATGCCAGGGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGCCCTTGCATCTACCATaGGGCCCAGGCTCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: FFLLALGESRLNSMQNAQPLHLP*GPGSQA
Trigger: GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGG...CTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACGAGTGGTCAGCCGCTaGCGTGTTCTCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: CFFLLALGESRLNSMQNARVVSR*RVLLVL
Trigger: GAGGACGAGGAGAACACGTCAGCGGCTGACCACTCG...TGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGGCTCCAAGTTCAGGATaGCCGAGACAGCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: LLALGESRLNSMQNAQFQAPSSG*PRQPGA
Trigger: TGCACCAGGCTGTCTCGGTCATCCTGAACTTGGAGC...CTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000587425.5
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
CDS-3UTR TCA 90 bp CCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGCCTCCACAGCATCCCCCTTaGGTGATATGTTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: PVLAPEQHPLSQSSEHEPPQHPP*VICFHF
Trigger: GAAATGGAAACATATCACTCAAGGGGGATGCTGTGG...AGGCTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCTGCATCACTTTCCACATaGCAAAACCAAGAGAACCCC +
Preference number: 4 (lower is better)
Translates to: SMQNAQFQRLWGHCPPRPASLST*QNQENP
Trigger: GGGGTTCTCTTGGTTTTGTCATGTGGAAAGTGATGC...AGGTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp AGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGGGCATGAAGGGCACATaGAGGCCCCCAGCTAGCCAG +
Preference number: 4 (lower is better)
Translates to: RNCCFFLLALGESRLNSMGMKGT*RPPASQ
Trigger: CTGGCTAGCTGGGGGCCTTCATGTGCCCTTCATGCC...CATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCGCATTGAGCTGGCCTTaGGGTTTCCCTTGCATCTAC +
Preference number: 4 (lower is better)
Translates to: FKPKTVPSQLGRAGYPHGALSWP*GFPCIY
Trigger: GTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGC...GCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp ATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAACCTCCTCGCGCTGGGTaGATCTCGTTTGAATTCTAT +
Preference number: 4 (lower is better)
Translates to: IELALRFPLHLPWGPGSQPPRAG*ISFEFY
Trigger: ATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGG...TTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGGATGGGATCCCGTCTCTGAATCCACCTaGAAGAGGGTCGTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: PGCHSDHCPSSCGTGWDPVSEST*KRVVLK
Trigger: CTTTAAAACGACCCTCTTTCAGGTGGATTCAGAGAC...GGGATCCCATCCAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp GGCATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCGTCTCTGAATCCACCTaGAAGAGGGTCGTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: GIELALRFPLHLPWGPGSVSEST*KRVVLK
Trigger: CTTTAAAACGACCCTCTTTCAGGTGGATTCAGAGAC...GGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCGCTGCGTGTCTAGGCTaGCGTCTGCCGCTCTCCGCC +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLAACLG*RLPLSA
Trigger: GGCGGAGAGCGGCAGACGGCAGCCTAGACACGCAGC...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp ATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCGGACCTTCTTGGGCTaGGTGTCTAGGCTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: ISFEFYAERTVPEAMGPLRTFLG*VSRLPS
Trigger: AGACGGCAGCCTAGACACGCAGCCCAAGAAGGTCCG...CAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGCTGAGGGGTGCAGGCTaGCATCTGCCACGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: FFLLALGESRLNSMQNAQLRGAG*HLPRRR
Trigger: CCTTCTACGTGGCAGATGGCAGCCTGCACCCCTCAG...CTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGGTAGATCGAGGCCAGTaGTTTGCCGAGGGCATCCCC +
Preference number: 4 (lower is better)
Translates to: FFLLALGESRLNSMQNAQVDRGQ*FAEGIP
Trigger: GGGGATGCCCTCGGCAAAGCACTGGCCTCGATCTAC...CTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCCCAGGCAGCAGCGTGTaGATGTCGCCGGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLPGSSV*MSPAVP
Trigger: GGGCACAGCCGGCGACATGCACACGCTGCTGCCTGG...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000590436.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCCCAACCAGGCCTGCGTaGCGCCCGCCCAGTGACATG +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLPTRPA*RPPSDM
Trigger: CATGTCACTGGGCGGGCGGCACGCAGGCCTGGTTGG...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000590684.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCCGTCCTCGGGGTGGCTaGCTCCAACCAGGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLRPRGG*LQPGLR
Trigger: ACGCAGGCCTGGTTGGAGGCAGCCACCCCGAGGACG...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000590684.5
ENST00000611869.5
CDS-3UTR GCA 90 bp GCAATGCTCAGTCTAGGAACAGCAGCAGAAATAGCGAGAGACACGGGACTTTTAAGGGCCGCGTGGTTGTaGATGAGGCTGGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: AMLSLGTAAEIARDTGLLRAAWL*MRLVLP
Trigger: AGGCAGCACCAGCCTCATGCACAACCACGCGGCCCT...TAAAAGTCCCGTGTCTCTCGCTATTTCTGCTGCTGTTCCTAGACTGAGCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGCCTCTGGTCCCAACAAAATaGCCCATTTCAGAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PVLAPEQHPLSQSSEHEPLVPTK*PISESC
Trigger: ACAGCTCTCTGAAATGGGGCATTTTGTTGGGACCAG...AGGCTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCTGCCACAGTGACCACTaGCCTAGTTCGTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: FKPKTVPSQLGRAGYPHGCHSDH*PSSCGT
Trigger: AGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCA...GCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCAAGGCCCACACCTGGGTaGCACAGTGACCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: CFFLLALGESRLNSMQNARPTPG*HSDHCP
Trigger: AGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCT...TGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACAGGCCCACACCTGGGTaGCACAGTGACCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: CCFFLLALGESRLNSMQNRPTPG*HSDHCP
Trigger: AGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCT...GTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CCCAGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTTCCACAAGGCCTCAATaGAGGGAGGGGCATGAAGGG +
Preference number: 4 (lower is better)
Translates to: PRNCCFFLLALGESRLNSSTRPQ*REGHEG
Trigger: CCCTTCATGCCCCTCCCTGCATTGAGGCCTTGTGGA...AGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp GCAATGCTCAGTCTAGGAACAGCAGCAGAAATAGCGAGAGACACGGGACTTTTAGCGCGTTATTGGCCATaGGCCTCTCCCGGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: AMLSLGTAAEIARDTGLLARYWP*ASPGPS
Trigger: TGAGGGACCGGGAGAGGCGCATGGCCAATAACGCGC...TAAAAGTCCCGTGTCTCTCGCTATTTCTGCTGCTGTTCCTAGACTGAGCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CCCAGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTTTGTCCGACTTGAGGTaGATCTGGCACATGCGCCCC +
Preference number: 4 (lower is better)
Translates to: PRNCCFFLLALGESRLNSLSDLR*IWHMRP
Trigger: GGGGCGCATGTGCCAGATGCACCTCAAGTCGGACAA...AGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGACCAGAAAATGAGCAGCTTGGTCTaGGCTTTGTCCGACTTGAGG +
Preference number: 4 (lower is better)
Translates to: QSPASWEELVTLMAKDQKMSSLV*ALSDLR
Trigger: CCTCAAGTCGGACAAAGCGCAGACCAAGCTGCTCAT...TTTCTGGTCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp GCAATGCTCAGTCTAGGAACAGCAGCAGAAATAGCGAGAGACACGGGACTTTTAAGCCCCAGGATGACCTaGACGGCCTGCTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: AMLSLGTAAEIARDTGLLSPRMT*TACCRM
Trigger: CATCCTGCAGCAGGCCGTGCAGGTCATCCTGGGGCT...TAAAAGTCCCGTGTCTCTCGCTATTTCTGCTGCTGTTCCTAGACTGAGCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACTTCCGCTCTCGCACCTaGTGCTCCAGCCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: CCFFLLALGESRLNSMQNFRSRT*CSSPRM
Trigger: CATCCTGGGGCTGGAGCAGCAGGTGCGAGAGCGGAA...GTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR GCA 90 bp GCAATGCTCAGTCTAGGAACAGCAGCAGAAATAGCGAGAGACACGGGACTTTTATTCCGCTCTCGCACCTaGTGCTCCAGCCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: AMLSLGTAAEIARDTGLLFRSRT*CSSPRM
Trigger: CATCCTGGGGCTGGAGCAGCAGGTGCGAGAGCGGAA...TAAAAGTCCCGTGTCTCTCGCTATTTCTGCTGCTGTTCCTAGACTGAGCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCCTCACCAGGCCTGCGTaGCGCCCGCCCAGTGACATG +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLLTRPA*RPPSDM
Trigger: CATGTCACTGGGCGGGCGGCACGCAGGCCTGGTGAG...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590436.5
CDS-3UTR GCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCCGTCCTCGGGGTGGCTaGCTCCAACCTGCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLRPRGG*LQPAGV
Trigger: CACGCCTGCAGGTTGGAGGCAGCCACCCCGAGGACG...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590436.5
CDS-3UTR CCA 90 bp AGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATTGCGACTCAGTGAAGTaGGTGCCCTCGCTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: SFKPKTVPSQLGRAGYPHCDSVK*VPSLKV
Trigger: GACCTTCAGCGAGGGCACCCACTTCACTGAGTCGCA...ATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp CCCAGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTTTCTCCTCCTCCGAGTaGTCAGCCGCTGACGTGTTC +
Preference number: 4 (lower is better)
Translates to: PRNCCFFLLALGESRLNSFSSSE*SAADVF
Trigger: GAACACGTCAGCGGCTGACCACTCGGAGGAGGAGAA...AGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CTTAAGAGATCAAACTCCCAGGGCGTAGGGGAAGCCACCGAGAAGGGAGAGGCACAGTTTCAGGATCCATaGGACAGGTCACAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: LKRSNSQGVGEATEKGEAQFQDP*DRSQSD
Trigger: GTCACTCTGTGACCTGTCCCATGGATCCTGAAACTG...TGCCTCTCCCTTCTCGGTGGCTTCCCCTACGCCCTGGGAGTTTGATCTCTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262965.12
ENST00000344749.9
CDS-3UTR CCA 90 bp TTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCTGTCTACGTCACGATaGCCCTCTGGTGTAATGGGG +
Preference number: 4 (lower is better)
Translates to: FEFYAERTVPEAMGPLPTLSTSR*PSGVMG
Trigger: CCCCATTACACCAGAGGGCCATCGTGACGTAGACAG...GGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGAGGGGACACCCTGCTaGTTCTGCAGCAGGGTCGGA +
Preference number: 4 (lower is better)
Translates to: CCFFLLALGESRLNSMQNEGTPC*FCSRVG
Trigger: TCCGACCCTGCTGCAGAACCAGCAGGGTGTCCCCTC...GTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCTCGTGTGGAACTGGATaGGATCCCAGGGTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: SFEFYAERTVPEAMGPLPSCGTG*DPRVGD
Trigger: GTCTCCTACCCTGGGATCCCATCCAGTTCCACACGA...GGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCAGCTCCCAAGCCAGTCTaGGGAGGGGAGTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: CFFLLALGESRLNSMQNAAPKPV*GGESGS
Trigger: ACTGCCTGACTCCCCTCCCCAGACTGGCTTGGGAGC...TGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCAGGCCGTCCTCGGGGTaGCTGCCTCCAACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLRPSSG*LPPTCR
Trigger: CCTGCAGGTTGGAGGCAGCCACCCCGAGGACGGCCT...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590436.5
CDS-3UTR TCA 90 bp TTAATCATCTGGTTGATCAAGAAATGCAATGCTCAGTCTAGGAACAGCAGCAGACCTTCTCCTCCCGCTTaGTCTCGCTGGCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LIIWLIKKCNAQSRNSSRPSPPA*SRWRPP
Trigger: CGGCGGCCGCCAGCGAGATCAAGCGGGAGGAGAAGG...TCTGCTGCTGTTCCTAGACTGAGCATTGCATTTCTTGATCAACCAGATGATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CTTAAGAGATCAAACTCCCAGGGCGTAGGGGAAGCCACCGAGAAGGGAGAGGCACCACAGCATCCCCCTTaGGTGATATGTTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: LKRSNSQGVGEATEKGEAPQHPP*VICFHF
Trigger: GAAATGGAAACATATCACTCAAGGGGGATGCTGTGG...TGCCTCTCCCTTCTCGGTGGCTTCCCCTACGCCCTGGGAGTTTGATCTCTTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp AGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCCTGGGGCAAAGGAGTaGAGGACAGGGTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RNCCFFLLALGESRLNSMPGAKE*RTGCPG
Trigger: TCCTGGACACCCTGTCCTTCACTCCTTTGCCCCAGG...CATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACCTGGGGCAAAGGAGTaGAGGACAGGGTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: CFFLLALGESRLNSMQNAPGAKE*RTGCPG
Trigger: TCCTGGACACCCTGTCCTTCACTCCTTTGCCCCAGG...TGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp GGTGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGTGGGTGAATCTCGTTTaGATTCTATGCAGAACGCAC +
Preference number: 4 (lower is better)
Translates to: GVLCWLLSSILSARVQSMWVNLV*ILCRTH
Trigger: GTGCGTTCTGCATAGAATTCAAACGAGATTCACCCA...CATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp AAGCCCCAAGGTGCCTTCATCAGGGAACGCCCACGCATCACTTTCCACATGACACCTCCTCGCGCTGGGTaGATCTCGTTTGAATTCTAT +
Preference number: 4 (lower is better)
Translates to: KPQGAFIRERPRITFHMTPPRAG*ISFEFY
Trigger: ATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGG...TGTCATGTGGAAAGTGATGCGTGGGCGTTCCCTGATGAAGGCACCTTGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CCAGGAGCAAAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGGCGCTTTGTCCGACTTaGGGTGCATCTGGCACATGC +
Preference number: 4 (lower is better)
Translates to: PGAKQEGEASSLKRSNSQALCPT*GASGTC
Trigger: GCATGTGCCAGATGCACCTCAAGTCGGACAAAGCGC...CTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTTTGCTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp ATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGGCGCTTTGTCCGACTTaGGGTGCATCTGGCACATGC +
Preference number: 4 (lower is better)
Translates to: ISFEFYAERTVPEAMGPLALCPT*GASGTC
Trigger: GCATGTGCCAGATGCACCTCAAGTCGGACAAAGCGC...CAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACCACCAAACGTGCTGCTaGTTCCACTGCTGCCCACCG +
Preference number: 4 (lower is better)
Translates to: CCFFLLALGESRLNSMQNHQTCC*FHCCPP
Trigger: CGGTGGGCAGCAGTGGAAGCAGCAGCACGTTTGGTG...GTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCAGGCCACCAAACGTaGTGCTGCTTCCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: CCFFLLALGESRLNSMQNAGHQT*CCFHCC
Trigger: GCAGCAGTGGAAGCAGCAGCACGTTTGGTGGCCTGC...GTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCAGTAGATCGAGGCCAGTaGTTTGCCGAGGGCATCCCC +
Preference number: 4 (lower is better)
Translates to: CFFLLALGESRLNSMQNAVDRGQ*FAEGIP
Trigger: GGGGATGCCCTCGGCAAAGCACTGGCCTCGATCTAC...TGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CCAGGCCCACACCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGTGGTTGATCAAGAAATaGAATGCTCAGTCTAGGAAC +
Preference number: 4 (lower is better)
Translates to: PGPHLGATVTTALVRVELWLIKK*NAQSRN
Trigger: GTTCCTAGACTGAGCATTGCATTTCTTGATCAACCA...CAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACAGGGAAGCCCCAAGGTaGCTTCATCAGGGAACGCCC +
Preference number: 4 (lower is better)
Translates to: CCFFLLALGESRLNSMQNREAPR*LHQGTP
Trigger: GGGCGTTCCCTGATGAAGGCACCTTGGGGCTTCCCT...GTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCCATTTCAGAGAGCTGTaGAGGTTCCAAGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: FKPKTVPSQLGRAGYPHGHFREL*RFQGRA
Trigger: TGCTCTCCCTTGGAACCTGCACAGCTCTCTGAAATG...GCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp GCAGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCCATTTCAGAGAGCTGTaGAGGTTCCAAGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: AVLNPRQSPASWEELVTLHFREL*RFQGRA
Trigger: TGCTCTCCCTTGGAACCTGCACAGCTCTCTGAAATG...GAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp ATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAACTGGTCCCAACAAAATaGCCCATTTCAGAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: IELALRFPLHLPWGPGSQLVPTK*PISESC
Trigger: ACAGCTCTCTGAAATGGGGCATTTTGTTGGGACCAG...TTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCAACACCCTGCTGGTTCTaGAGCAGGGTCGGACGCACA +
Preference number: 4 (lower is better)
Translates to: CFFLLALGESRLNSMQNATPCWF*SRVGRT
Trigger: TGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGT...TGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGACACCCTGCTGGTTCTaGAGCAGGGTCGGACGCACA +
Preference number: 4 (lower is better)
Translates to: RNCCFFLLALGESRLNSMTPCWF*SRVGRT
Trigger: TGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGT...CATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCTGCCACAGTGACCACTaGCCTAGTTCGTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: SFEFYAERTVPEAMGPLPCHSDH*PSSCGT
Trigger: AGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCA...GGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCTTGTCCGACTTGAGGTaGATCTGGCACATGCGCCCC +
Preference number: 4 (lower is better)
Translates to: FLLALGESRLNSMQNAQFLSDLR*IWHMRP
Trigger: GGGGCGCATGTGCCAGATGCACCTCAAGTCGGACAA...GAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCTGGCTGCCTCCAACCTaGAGGCGTGGGGAGACGGGT +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLWLPPT*RRGETG
Trigger: ACCCGTCTCCCCACGCCTGCAGGTTGGAGGCAGCCA...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590436.5
CDS-3UTR CCA 90 bp CCAGGAGCAAAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGTGCGACTCAGTGAAGTaGGTGCCCTCGCTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: PGAKQEGEASSLKRSNSQCDSVK*VPSLKV
Trigger: GACCTTCAGCGAGGGCACCCACTTCACTGAGTCGCA...CTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTTTGCTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCTGGCTGCGGAGCACGTaGATGGCCTCGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLWLRST*MASSRW
Trigger: CCACCTGGACGAGGCCATCCACGTGCTCCGCAGCCA...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000590436.5
ENST00000611869.5
CDS-3UTR CCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCGCTCCCGGGCGTTATTaGCCACCCGGCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLAPGRY*PPGAPS
Trigger: AGAAGGAGCGCCGGGTGGCCAATAACGCCCGGGAGC...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262965.12
ENST00000593064.5
ENST00000651991.1
CDS-3UTR CCA 90 bp CCCAGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTGTCACGATGGCCCTCTaGTGTAATGGGGACATGGTG +
Preference number: 4 (lower is better)
Translates to: PRNCCFFLLALGESRLNSVTMAL*CNGDMV
Trigger: CACCATGTCCCCATTACACCAGAGGGCCATCGTGAC...AGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp AAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGGGCGTAGGGGTCACGATGGCCCTCTaGTGTAATGGGGACATGGTG +
Preference number: 4 (lower is better)
Translates to: KQEGEASSLKRSNSQGVGVTMAL*CNGDMV
Trigger: CACCATGTCCCCATTACACCAGAGGGCCATCGTGAC...CCCTACGCCCTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCGTCACGATGGCCCTCTaGTGTAATGGGGACATGGTG +
Preference number: 4 (lower is better)
Translates to: SRLNSMQNAQFQRLWGHCVTMAL*CNGDMV
Trigger: CACCATGTCCCCATTACACCAGAGGGCCATCGTGAC...GCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGGTCACGATGGCCCTCTaGTGTAATGGGGACATGGTG +
Preference number: 4 (lower is better)
Translates to: LLALGESRLNSMQNAQFQVTMAL*CNGDMV
Trigger: CACCATGTCCCCATTACACCAGAGGGCCATCGTGAC...CTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp AGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGACCTGGAGAGAGGCCTaGGTGCTGGGACATGGGACA +
Preference number: 4 (lower is better)
Translates to: RNCCFFLLALGESRLNSMTWREA*VLGHGT
Trigger: TGTCCCATGTCCCAGCACCCAGGCCTCTCTCCAGGT...CATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp CCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGCCTAGCTGGTTACCCTCATaGCAAAAGACCAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: PVLAPEQHPLSQSSEHEPSWLPS*QKTRKG
Trigger: TCCTTTTCTGGTCTTTTGCCATGAGGGTAACCAGCT...AGGCTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp AGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGTCCCCAGCCAGCTaGGAAGAGCTGGTTACCCTC +
Preference number: 4 (lower is better)
Translates to: RNCCFFLLALGESRLNSMQSPAS*EELVTL
Trigger: GAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTG...CATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp AAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGGGCGTAGGGTCGTGTGGAACTGGATaGGATCCCAGGGTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: KQEGEASSLKRSNSQGVGSCGTG*DPRVGD
Trigger: GTCTCCTACCCTGGGATCCCATCCAGTTCCACACGA...CCCTACGCCCTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp AGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGAGTCCAGGAGGTCACTaGGCTCCTTGTCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: RNCCFFLLALGESRLNSMSPGGH*APCLCP
Trigger: TGGGCACAGACAAGGAGCTCAGTGACCTCCTGGACT...CATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR TCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCCGAGTGGTCAGCCGCTaGCGTGTTCTCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLRVVSR*RVLLVL
Trigger: GAGGACGAGGAGAACACGTCAGCGGCTGACCACTCG...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000590436.5
ENST00000590684.5
ENST00000593064.5
ENST00000611869.5
ENST00000651991.1
CDS-3UTR TCA 90 bp TTAATCATCTGGTTGATCAAGAAATGCAATGCTCAGTCTAGGAACAGCAGCAGAGCCAGAGCACAGGGCTaGAAGCGGGTGGCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: LIIWLIKKCNAQSRNSSRARAQG*KRVARP
Trigger: GGGACGAGCCACCCGCTTTCAGCCCTGTGCTCTGGC...TCTGCTGCTGTTCCTAGACTGAGCATTGCATTTCTTGATCAACCAGATGATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
CDS-3UTR TCA 90 bp TTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGGCAGATACCAGGCATTaGGCTGGCCTTGAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: FFLLALGESRLNSMQNAQADTRH*AGLEVS
Trigger: GGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTGC...CTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp ATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACTGGGTGAATCTCGTTTaGATTCTATGCAGAACGCAC +
Preference number: 4 (lower is better)
Translates to: ILCRTHSSRGYGATAHPDWVNLV*ILCRTH
Trigger: GTGCGTTCTGCATAGAATTCAAACGAGATTCACCCA...GTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CCAGGAGCAAAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGGAAGAGAGGCTGCTGTaGGACTCAGTGAAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PGAKQEGEASSLKRSNSQEERLL*DSVKWV
Trigger: CACCCACTTCACTGAGTCGCACAGCAGCCTCTCTTC...CTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTTTGCTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCTCTTCTATCTTACTCTaGAGGCCGTGGAGACCCCCG +
Preference number: 4 (lower is better)
Translates to: FLLALGESRLNSMQNAQFSSILL*RPWRPP
Trigger: CGGGGGTCTCCACGGCCTGCAGAGTAAGATAGAAGA...GAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TTAATCATCTGGTTGATCAAGAAATGCAATGCTCAGTCTAGGAACAGCAGCAGACCAACCAGGCCTGCGTaGCGCCCGCCCAGTGACATG +
Preference number: 4 (lower is better)
Translates to: LIIWLIKKCNAQSRNSSRPTRPA*RPPSDM
Trigger: CATGTCACTGGGCGGGCGGCACGCAGGCCTGGTTGG...TCTGCTGCTGTTCCTAGACTGAGCATTGCATTTCTTGATCAACCAGATGATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCAGGGCCGCGTGGTTGTaGATGAGGCTGGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLRAAWL*MRLVLP
Trigger: AGGCAGCACCAGCCTCATGCACAACCACGCGGCCCT...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000590436.5
ENST00000590684.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAACTGGTCCCAACAAAATaGCCCATTTCAGAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: NPRQSPASWEELVTLMAKLVPTK*PISESC
Trigger: ACAGCTCTCTGAAATGGGGCATTTTGTTGGGACCAG...TTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACTCCACAAGGCCTCAATaGAGGGAGGGGCATGAAGGG +
Preference number: 4 (lower is better)
Translates to: CCFFLLALGESRLNSMQNSTRPQ*REGHEG
Trigger: CCCTTCATGCCCCTCCCTGCATTGAGGCCTTGTGGA...GTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCGCGCGTTATTGGCCATaGGCCTCTCCCGGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLARYWP*ASPGPS
Trigger: TGAGGGACCGGGAGAGGCGCATGGCCAATAACGCGC...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000590436.5
ENST00000590684.5
ENST00000611869.5
ENST00000651991.1
CDS-3UTR GCA 90 bp GCAATGCTCAGTCTAGGAACAGCAGCAGAAATAGCGAGAGACACGGGACTTTTATTGTCCGACTTGAGGTaGATCTGGCACATGCGCCCC +
Preference number: 4 (lower is better)
Translates to: AMLSLGTAAEIARDTGLLLSDLR*IWHMRP
Trigger: GGGGCGCATGTGCCAGATGCACCTCAAGTCGGACAA...TAAAAGTCCCGTGTCTCTCGCTATTTCTGCTGCTGTTCCTAGACTGAGCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp AGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGTTGTCCGACTTGAGGTaGATCTGGCACATGCGCCCC +
Preference number: 4 (lower is better)
Translates to: RNCCFFLLALGESRLNSMLSDLR*IWHMRP
Trigger: GGGGCGCATGTGCCAGATGCACCTCAAGTCGGACAA...CATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGATGAGCAGCTTGGTCTaGGCTTTGTCCGACTTGAGG +
Preference number: 4 (lower is better)
Translates to: LLALGESRLNSMQNAQFQMSSLV*ALSDLR
Trigger: CCTCAAGTCGGACAAAGCGCAGACCAAGCTGCTCAT...CTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR GCA 90 bp CCCAGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGAGCAGCTTGGTCTaGGCTTTGTCCGACTTGAGG +
Preference number: 4 (lower is better)
Translates to: PRNCCFFLLALGESRLNSMSSLV*ALSDLR
Trigger: CCTCAAGTCGGACAAAGCGCAGACCAAGCTGCTCAT...AGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR CCA 90 bp GCAATGCTCAGTCTAGGAACAGCAGCAGAAATAGCGAGAGACACGGGACTTTTATTCTCCTCCTCCGAGTaGTCAGCCGCTGACGTGTTC +
Preference number: 4 (lower is better)
Translates to: AMLSLGTAAEIARDTGLLFSSSE*SAADVF
Trigger: GAACACGTCAGCGGCTGACCACTCGGAGGAGGAGAA...TAAAAGTCCCGTGTCTCTCGCTATTTCTGCTGCTGTTCCTAGACTGAGCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGTTTCAGGATCCATaGGACAGGTCACAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: FEFYAERTVPEAMGPLPTQFQDP*DRSQSD
Trigger: GTCACTCTGTGACCTGTCCCATGGATCCTGAAACTG...GGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262965.12
ENST00000344749.9
CDS-3UTR CCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCCTGGGTGCTGGGACATaGGACACAGATGGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLLGAGT*DTDGPE
Trigger: CTCGGGCCCATCTGTGTCCCATGTCCCAGCACCCAG...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp ATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACAGCTGGTTACCCTCATaGCAAAAGACCAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: ILCRTHSSRGYGATAHPDSWLPS*QKTRKG
Trigger: TCCTTTTCTGGTCTTTTGCCATGAGGGTAACCAGCT...GTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp ACTTGCAGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCAGCTGGGAAGAGCTaGTTACCCTCATGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: TCSFKPKTVPSQLGRAGYPAGKS*LPSWQK
Trigger: CTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGG...GTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACTGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCAGCTGGGAAGAGCTaGTTACCCTCATGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: SRLNSMQNAQFQRLWGHCPAGKS*LPSWQK
Trigger: CTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGG...GCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp ATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGTCGTGTGGAACTGGATaGGATCCCAGGGTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: ISFEFYAERTVPEAMGPLSCGTG*DPRVGD
Trigger: GTCTCCTACCCTGGGATCCCATCCAGTTCCACACGA...CAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCTCCAACCTGCAGGCGTaGGGAGACGGGTGCATCAGG +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLSNLQA*GDGCIR
Trigger: CCTGATGCACCCGTCTCCCCACGCCTGCAGGTTGGA...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590436.5
CDS-3UTR TCA 90 bp TCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCCCACAGCATCCCCCTTaGGTGATATGTTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: SFEFYAERTVPEAMGPLPPQHPP*VICFHF
Trigger: GAAATGGAAACATATCACTCAAGGGGGATGCTGTGG...GGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCGCATCACTTTCCACATaGCAAAACCAAGAGAACCCC +
Preference number: 4 (lower is better)
Translates to: FEFYAERTVPEAMGPLPTASLST*QNQENP
Trigger: GGGGTTCTCTTGGTTTTGTCATGTGGAAAGTGATGC...GGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp GCAGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCTGGGTGAATCTCGTTTaGATTCTATGCAGAACGCAC +
Preference number: 4 (lower is better)
Translates to: AVLNPRQSPASWEELVTLWVNLV*ILCRTH
Trigger: GTGCGTTCTGCATAGAATTCAAACGAGATTCACCCA...GAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCTCCTCGCGCTGGGTaGATCTCGTTTGAATTCTAT +
Preference number: 4 (lower is better)
Translates to: SRLNSMQNAQFQRLWGHCPPRAG*ISFEFY
Trigger: ATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGG...GCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CCCAGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTCCTCCTCGCGCTGGGTaGATCTCGTTTGAATTCTAT +
Preference number: 4 (lower is better)
Translates to: PRNCCFFLLALGESRLNSPPRAG*ISFEFY
Trigger: ATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGG...AGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp ACTTGCAGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACTACAGGACAGGTCTCTaGATCCACCTGAAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: TCSFKPKTVPSQLGRAGYYRTGL*IHLKEG
Trigger: ACCCTCTTTCAGGTGGATTCAGAGACCTGTCCTGTA...GTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACTGCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGTACAGGACAGGTCTCTaGATCCACCTGAAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: LLALGESRLNSMQNAQFQYRTGL*IHLKEG
Trigger: ACCCTCTTTCAGGTGGATTCAGAGACCTGTCCTGTA...CTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCCGGACCTTCTTGGGCTaGGTGTCTAGGCTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLRTFLG*VSRLPS
Trigger: AGACGGCAGCCTAGACACGCAGCCCAAGAAGGTCCG...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TTAATCATCTGGTTGATCAAGAAATGCAATGCTCAGTCTAGGAACAGCAGCAGAGTGCAGGCTGCCATCTaGCACGTAGAAGGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: LIIWLIKKCNAQSRNSSRVQAAI*HVEGGG
Trigger: CCCGCCCCCTTCTACGTGGCAGATGGCAGCCTGCAC...TCTGCTGCTGTTCCTAGACTGAGCATTGCATTTCTTGATCAACCAGATGATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCCTGAGGGGTGCAGGCTaGCATCTGCCACGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLLRGAG*HLPRRR
Trigger: CCTTCTACGTGGCAGATGGCAGCCTGCACCCCTCAG...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCGCAGGCCACCAAACGTaGTGCTGCTTCCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLAGHQT*CCFHCC
Trigger: GCAGCAGTGGAAGCAGCAGCACGTTTGGTGGCCTGC...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TTAATCATCTGGTTGATCAAGAAATGCAATGCTCAGTCTAGGAACAGCAGCAGACCTGAGGGGAGAGGATaGGGCAGGGAAGCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: LIIWLIKKCNAQSRNSSRPEGRG*GREAPR
Trigger: CCTTGGGGCTTCCCTGCCGCATCCTCTCCCCTCAGG...TCTGCTGCTGTTCCTAGACTGAGCATTGCATTTCTTGATCAACCAGATGATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TTAATCATCTGGTTGATCAAGAAATGCAATGCTCAGTCTAGGAACAGCAGCAGAGGGAGACGCCCGACCTaGAGCGGGGATGAACACAGC +
Preference number: 4 (lower is better)
Translates to: LIIWLIKKCNAQSRNSSRGRRPT*SGDEHS
Trigger: GCTGTGTTCATCCCCGCTGCAGGTCGGGCGTCTCCC...TCTGCTGCTGTTCCTAGACTGAGCATTGCATTTCTTGATCAACCAGATGATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TTAATCATCTGGTTGATCAAGAAATGCAATGCTCAGTCTAGGAACAGCAGCAGAAGGCTATGGGGCCACTaGCCACCCAGACCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: LIIWLIKKCNAQSRNSSRRLWGH*PPRPRG
Trigger: GCCCCTAGGTCTGGGTGGGCAGTGGCCCCATAGCCT...TCTGCTGCTGTTCCTAGACTGAGCATTGCATTTCTTGATCAACCAGATGATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp ATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGATGAGCAGCTTGGTCTaGGCTTTGTCCGACTTGAGG +
Preference number: 4 (lower is better)
Translates to: ISFEFYAERTVPEAMGPLMSSLV*ALSDLR
Trigger: CCTCAAGTCGGACAAAGCGCAGACCAAGCTGCTCAT...CAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR CCA 90 bp ATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCGAACCTTGTCAGGTTaGTGTTGGCTCGATGCTGAC +
Preference number: 4 (lower is better)
Translates to: ISFEFYAERTVPEAMGPLRTLSG*CWLDAD
Trigger: GTCAGCATCGAGCCAACACCAACCTGACAAGGTTCG...CAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262965.12
ENST00000344749.9
CDS-3UTR CCA 90 bp TGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCAGTCACGATGGCCCTCTaGTGTAATGGGGACATGGTG +
Preference number: 4 (lower is better)
Translates to: CFFLLALGESRLNSMQNAVTMAL*CNGDMV
Trigger: CACCATGTCCCCATTACACCAGAGGGCCATCGTGAC...TGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp GCAATGCTCAGTCTAGGAACAGCAGCAGAAATAGCGAGAGACACGGGACTTTTAGTCACGATGGCCCTCTaGTGTAATGGGGACATGGTG +
Preference number: 4 (lower is better)
Translates to: AMLSLGTAAEIARDTGLLVTMAL*CNGDMV
Trigger: CACCATGTCCCCATTACACCAGAGGGCCATCGTGAC...TAAAAGTCCCGTGTCTCTCGCTATTTCTGCTGCTGTTCCTAGACTGAGCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp AACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAAGCTGGTTACCCTCATaGCAAAAGACCAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: NPRQSPASWEELVTLMAKSWLPS*QKTRKG
Trigger: TCCTTTTCTGGTCTTTTGCCATGAGGGTAACCAGCT...TTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp TTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCCAGCTGGGAAGAGCTaGTTACCCTCATGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: FLLALGESRLNSMQNAQFPAGKS*LPSWQK
Trigger: CTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGG...GAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TTAATCATCTGGTTGATCAAGAAATGCAATGCTCAGTCTAGGAACAGCAGCAGACGAGTGGTCAGCCGCTaGCGTGTTCTCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: LIIWLIKKCNAQSRNSSRRVVSR*RVLLVL
Trigger: GAGGACGAGGAGAACACGTCAGCGGCTGACCACTCG...TCTGCTGCTGTTCCTAGACTGAGCATTGCATTTCTTGATCAACCAGATGATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCGCTCCAAGTTCAGGATaGCCGAGACAGCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLAPSSG*PRQPGA
Trigger: TGCACCAGGCTGTCTCGGTCATCCTGAACTTGGAGC...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262965.12
ENST00000593064.5
ENST00000651991.1
CDS-3UTR TCA 90 bp AAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGGGCGTAGGGCCACAGCATCCCCCTTaGGTGATATGTTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: KQEGEASSLKRSNSQGVGPQHPP*VICFHF
Trigger: GAAATGGAAACATATCACTCAAGGGGGATGCTGTGG...CCCTACGCCCTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp ATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGTACAGGACAGGTCTCTaGATCCACCTGAAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: ISFEFYAERTVPEAMGPLYRTGL*IHLKEG
Trigger: ACCCTCTTTCAGGTGGATTCAGAGACCTGTCCTGTA...CAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCTACAGGACAGGTCTCTaGATCCACCTGAAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: FLLALGESRLNSMQNAQFYRTGL*IHLKEG
Trigger: ACCCTCTTTCAGGTGGATTCAGAGACCTGTCCTGTA...GAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TTAATCATCTGGTTGATCAAGAAATGCAATGCTCAGTCTAGGAACAGCAGCAGACGGCCTGCTGCAGGATaGGCAGCTTGGTCTGCGCTT +
Preference number: 4 (lower is better)
Translates to: LIIWLIKKCNAQSRNSSRRPAAG*AAWSAL
Trigger: AAGCGCAGACCAAGCTGCTCATCCTGCAGCAGGCCG...TCTGCTGCTGTTCCTAGACTGAGCATTGCATTTCTTGATCAACCAGATGATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp AGGTTTACACGGGGTCTTTTTAATACAACGTTTAATCATCTGGTTGATCAAGAAGCATGTCGCCGGCTGTaGCCACGGCGTGGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: RFTRGLFNTTFNHLVDQEACRRL*PRRGCG
Trigger: TCCGCAGCCACGCCGTGGGCACAGCCGGCGACATGC...TTCTTGATCAACCAGATGATTAAACGTTGTATTAAAAAGACCCCGTGTAAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp CCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGATGGTTGATCAAGAAATaGAATGCTCAGTCTAGGAAC +
Preference number: 4 (lower is better)
Translates to: PKTVPSQLGRAGYPHGKRWLIKK*NAQSRN
Trigger: GTTCCTAGACTGAGCATTGCATTTCTTGATCAACCA...TCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TTAATCATCTGGTTGATCAAGAAATGCAATGCTCAGTCTAGGAACAGCAGCAGAAGGCCCACACCTGGGTaGCACAGTGACCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: LIIWLIKKCNAQSRNSSRRPTPG*HSDHCP
Trigger: AGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCT...TCTGCTGCTGTTCCTAGACTGAGCATTGCATTTCTTGATCAACCAGATGATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACCGTACTGCTCGCACTTaGTGCTCCAAGTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: CCFFLLALGESRLNSMQNRTART*CSKFRM
Trigger: CATCCTGAACTTGGAGCAGCAAGTGCGAGCAGTACG...GTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592395.5
CDS-3UTR CCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCTGCGACTCAGTGAAGTaGGTGCCCTCGCTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLCDSVK*VPSLKV
Trigger: GACCTTCAGCGAGGGCACCCACTTCACTGAGTCGCA...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262965.12
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCTTCTCCTCCTCCGAGTaGTCAGCCGCTGACGTGTTC +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLFSSSE*SAADVF
Trigger: GAACACGTCAGCGGCTGACCACTCGGAGGAGGAGAA...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000590436.5
ENST00000590684.5
ENST00000593064.5
ENST00000611869.5
ENST00000651991.1
CDS-3UTR CCA 90 bp GCAATGCTCAGTCTAGGAACAGCAGCAGAAATAGCGAGAGACACGGGACTTTTACGAACCTTGTCAGGTTaGTGTTGGCTCGATGCTGAC +
Preference number: 4 (lower is better)
Translates to: AMLSLGTAAEIARDTGLLRTLSG*CWLDAD
Trigger: GTCAGCATCGAGCCAACACCAACCTGACAAGGTTCG...TAAAAGTCCCGTGTCTCTCGCTATTTCTGCTGCTGTTCCTAGACTGAGCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
3UTR CAA 72 bp TGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTaGAATTCTATGCAGAACGCACAGTTCCAGAGGCTA +
Preference number: 4 (lower is better)
Translates to: CCFFLLALGESR*NSMQNAQFQRL
Trigger: TAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CCCAGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTTGGGTGAATCTCGTTTaGATTCTATGCAGAACGCAC +
Preference number: 4 (lower is better)
Translates to: PRNCCFFLLALGESRLNSWVNLV*ILCRTH
Trigger: GTGCGTTCTGCATAGAATTCAAACGAGATTCACCCA...AGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACCCTCCTCGCGCTGGGTaGATCTCGTTTGAATTCTAT +
Preference number: 4 (lower is better)
Translates to: CCFFLLALGESRLNSMQNPPRAG*ISFEFY
Trigger: ATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGG...GTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp GCAATGCTCAGTCTAGGAACAGCAGCAGAAATAGCGAGAGACACGGGACTTTTACCTCCTCGCGCTGGGTaGATCTCGTTTGAATTCTAT +
Preference number: 4 (lower is better)
Translates to: AMLSLGTAAEIARDTGLLPPRAG*ISFEFY
Trigger: ATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGG...TAAAAGTCCCGTGTCTCTCGCTATTTCTGCTGCTGTTCCTAGACTGAGCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp AAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGGGCGTAGGGGTCTCTGAATCCACCTaGAAGAGGGTCGTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: KQEGEASSLKRSNSQGVGVSEST*KRVVLK
Trigger: CTTTAAAACGACCCTCTTTCAGGTGGATTCAGAGAC...CCCTACGCCCTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp GCAATGCTCAGTCTAGGAACAGCAGCAGAAATAGCGAGAGACACGGGACTTTTATACAGGACAGGTCTCTaGATCCACCTGAAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: AMLSLGTAAEIARDTGLLYRTGL*IHLKEG
Trigger: ACCCTCTTTCAGGTGGATTCAGAGACCTGTCCTGTA...TAAAAGTCCCGTGTCTCTCGCTATTTCTGCTGCTGTTCCTAGACTGAGCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TTAATCATCTGGTTGATCAAGAAATGCAATGCTCAGTCTAGGAACAGCAGCAGACGGACCTTCTTGGGCTaGGTGTCTAGGCTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: LIIWLIKKCNAQSRNSSRRTFLG*VSRLPS
Trigger: AGACGGCAGCCTAGACACGCAGCCCAAGAAGGTCCG...TCTGCTGCTGTTCCTAGACTGAGCATTGCATTTCTTGATCAACCAGATGATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCTCTTCTATCTTACTCTaGAGGCCGTGGAGACCCCCG +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLSSILL*RPWRPP
Trigger: CGGGGGTCTCCACGGCCTGCAGAGTAAGATAGAAGA...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000590436.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AGGTTTACACGGGGTCTTTTTAATACAACGTTTAATCATCTGGTTGATCAAGAACCAGGCAGCAGCGTGTaGATGTCGCCGGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: RFTRGLFNTTFNHLVDQEPGSSV*MSPAVP
Trigger: GGGCACAGCCGGCGACATGCACACGCTGCTGCCTGG...TTCTTGATCAACCAGATGATTAAACGTTGTATTAAAAAGACCCCGTGTAAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp TGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACCATTTCAGAGAGCTGTaGAGGTTCCAAGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: CCFFLLALGESRLNSMQNHFREL*RFQGRA
Trigger: TGCTCTCCCTTGGAACCTGCACAGCTCTCTGAAATG...GTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TTAATCATCTGGTTGATCAAGAAATGCAATGCTCAGTCTAGGAACAGCAGCAGAACCTGCACGGCCTGCTaGAGGATGAGCAGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LIIWLIKKCNAQSRNSSRTCTAC*RMSSLV
Trigger: GACCAAGCTGCTCATCCTGCAGCAGGCCGTGCAGGT...TCTGCTGCTGTTCCTAGACTGAGCATTGCATTTCTTGATCAACCAGATGATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CCA 90 bp GCAATGCTCAGTCTAGGAACAGCAGCAGAAATAGCGAGAGACACGGGACTTTTACAGTTTCAGGATCCATaGGACAGGTCACAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: AMLSLGTAAEIARDTGLLQFQDP*DRSQSD
Trigger: GTCACTCTGTGACCTGTCCCATGGATCCTGAAACTG...TAAAAGTCCCGTGTCTCTCGCTATTTCTGCTGCTGTTCCTAGACTGAGCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
CDS-3UTR TCA 90 bp AGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGGCATCACTTTCCACATaGCAAAACCAAGAGAACCCC +
Preference number: 4 (lower is better)
Translates to: RNCCFFLLALGESRLNSMASLST*QNQENP
Trigger: GGGGTTCTCTTGGTTTTGTCATGTGGAAAGTGATGC...CATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp AGGTTTACACGGGGTCTTTTTAATACAACGTTTAATCATCTGGTTGATCAAGAAGGTCAGTCCCCTTCCTaGGGGGAGAGGATGCGGCAG +
Preference number: 4 (lower is better)
Translates to: RFTRGLFNTTFNHLVDQEGQSPS*GERMRQ
Trigger: CTGCCGCATCCTCTCCCCTCAGGAAGGGGACTGACC...TTCTTGATCAACCAGATGATTAAACGTTGTATTAAAAAGACCCCGTGTAAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp CCAGGAGCAAAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGTGGGTGAATCTCGTTTaGATTCTATGCAGAACGCAC +
Preference number: 4 (lower is better)
Translates to: PGAKQEGEASSLKRSNSQWVNLV*ILCRTH
Trigger: GTGCGTTCTGCATAGAATTCAAACGAGATTCACCCA...CTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTTTGCTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp ATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGTGGGTGAATCTCGTTTaGATTCTATGCAGAACGCAC +
Preference number: 4 (lower is better)
Translates to: ISFEFYAERTVPEAMGPLWVNLV*ILCRTH
Trigger: GTGCGTTCTGCATAGAATTCAAACGAGATTCACCCA...CAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTGGGTGAATCTCGTTTaGATTCTATGCAGAACGCAC +
Preference number: 4 (lower is better)
Translates to: FFLLALGESRLNSMQNAQWVNLV*ILCRTH
Trigger: GTGCGTTCTGCATAGAATTCAAACGAGATTCACCCA...CTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGGTCTCTGAATCCACCTaGAAGAGGGTCGTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: FFLLALGESRLNSMQNAQVSEST*KRVVLK
Trigger: CTTTAAAACGACCCTCTTTCAGGTGGATTCAGAGAC...CTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCTGGTCCCAACAAAATaGCCCATTTCAGAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RNCCFFLLALGESRLNSMLVPTK*PISESC
Trigger: ACAGCTCTCTGAAATGGGGCATTTTGTTGGGACCAG...CATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TTAATCATCTGGTTGATCAAGAAATGCAATGCTCAGTCTAGGAACAGCAGCAGATCCACAAGGCCTCAATaGAGGGAGGGGCATGAAGGG +
Preference number: 4 (lower is better)
Translates to: LIIWLIKKCNAQSRNSSRSTRPQ*REGHEG
Trigger: CCCTTCATGCCCCTCCCTGCATTGAGGCCTTGTGGA...TCTGCTGCTGTTCCTAGACTGAGCATTGCATTTCTTGATCAACCAGATGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCCGTACTGCTCGCACTTaGTGCTCCAAGTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLRTART*CSKFRM
Trigger: CATCCTGAACTTGGAGCAGCAAGTGCGAGCAGTACG...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651991.1
CDS-3UTR CCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCCGAACCTTGTCAGGTTaGTGTTGGCTCGATGCTGAC +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLRTLSG*CWLDAD
Trigger: GTCAGCATCGAGCCAACACCAACCTGACAAGGTTCG...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
ENST00000590684.5
CDS-3UTR CCA 90 bp TTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCAGCTGGTTACCCTCATaGCAAAAGACCAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: FLLALGESRLNSMQNAQFSWLPS*QKTRKG
Trigger: TCCTTTTCTGGTCTTTTGCCATGAGGGTAACCAGCT...GAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCCCTCCTCGCGCTGGGTaGATCTCGTTTGAATTCTAT +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLPPRAG*ISFEFY
Trigger: ATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGG...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp AGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGGTCTCTGAATCCACCTaGAAGAGGGTCGTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: RNCCFFLLALGESRLNSMVSEST*KRVVLK
Trigger: CTTTAAAACGACCCTCTTTCAGGTGGATTCAGAGAC...CATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp TGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCAGTCTCTGAATCCACCTaGAAGAGGGTCGTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: CFFLLALGESRLNSMQNAVSEST*KRVVLK
Trigger: CTTTAAAACGACCCTCTTTCAGGTGGATTCAGAGAC...TGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATTGGTTGATCAAGAAATaGAATGCTCAGTCTAGGAAC +
Preference number: 4 (lower is better)
Translates to: SFKPKTVPSQLGRAGYPHWLIKK*NAQSRN
Trigger: GTTCCTAGACTGAGCATTGCATTTCTTGATCAACCA...ATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AGGTTTACACGGGGTCTTTTTAATACAACGTTTAATCATCTGGTTGATCAAGAAAGGGTGTGGTCCCCATaGCAGGGGTCACTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: RFTRGLFNTTFNHLVDQERVWSP*QGSLVP
Trigger: TGGGACCAGTGACCCCTGGCATGGGGACCACACCCT...TTCTTGATCAACCAGATGATTAAACGTTGTATTAAAAAGACCCCGTGTAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CCA 90 bp AGGTTTACACGGGGTCTTTTTAATACAACGTTTAATCATCTGGTTGATCAAGAAGGGGGTGTCCTGTGCTaGCTCCTGAGCAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: RFTRGLFNTTFNHLVDQEGGVLC*LLSSIL
Trigger: GAGGATGCTGCTCAGGAGCCAGCACAGGACACCCCC...TTCTTGATCAACCAGATGATTAAACGTTGTATTAAAAAGACCCCGTGTAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR TCA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCCCACAGCATCCCCCTTaGGTGATATGTTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: RISQVSTASPLSDMFPFLPQHPP*VICFHF
Trigger: GAAATGGAAACATATCACTCAAGGGGGATGCTGTGG...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000590436.5
ENST00000590684.5
ENST00000593064.5
ENST00000611869.5
ENST00000651991.1
CDS-3UTR GCA 90 bp TTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTGGTTGATCAAGAAATaGAATGCTCAGTCTAGGAAC +
Preference number: 4 (lower is better)
Translates to: FFLLALGESRLNSMQNAQWLIKK*NAQSRN
Trigger: GTTCCTAGACTGAGCATTGCATTTCTTGATCAACCA...CTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp ATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGTGGTTGATCAAGAAATaGAATGCTCAGTCTAGGAAC +
Preference number: 4 (lower is better)
Translates to: ISFEFYAERTVPEAMGPLWLIKK*NAQSRN
Trigger: GTTCCTAGACTGAGCATTGCATTTCTTGATCAACCA...CAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp AGGTTTACACGGGGTCTTTTTAATACAACGTTTAATCATCTGGTTGATCAAGAAAGGGAAGCCCCAAGGTaGCTTCATCAGGGAACGCCC +
Preference number: 4 (lower is better)
Translates to: RFTRGLFNTTFNHLVDQEREAPR*LHQGTP
Trigger: GGGCGTTCCCTGATGAAGGCACCTTGGGGCTTCCCT...TTCTTGATCAACCAGATGATTAAACGTTGTATTAAAAAGACCCCGTGTAAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TTAATCATCTGGTTGATCAAGAAATGCAATGCTCAGTCTAGGAACAGCAGCAGATGCCACAGTGACCACTaGCCTAGTTCGTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: LIIWLIKKCNAQSRNSSRCHSDH*PSSCGT
Trigger: AGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCA...TCTGCTGCTGTTCCTAGACTGAGCATTGCATTTCTTGATCAACCAGATGATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TTAATCATCTGGTTGATCAAGAAATGCAATGCTCAGTCTAGGAACAGCAGCAGAATGAGCAGCTTGGTCTaGGCTTTGTCCGACTTGAGG +
Preference number: 4 (lower is better)
Translates to: LIIWLIKKCNAQSRNSSRMSSLV*ALSDLR
Trigger: CCTCAAGTCGGACAAAGCGCAGACCAAGCTGCTCAT...TCTGCTGCTGTTCCTAGACTGAGCATTGCATTTCTTGATCAACCAGATGATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000611869.5
CDS-3UTR GCA 90 bp AGGTTTACACGGGGTCTTTTTAATACAACGTTTAATCATCTGGTTGATCAAGAATGCCACAGTGACCACTaGCCTAGTTCGTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: RFTRGLFNTTFNHLVDQECHSDH*PSSCGT
Trigger: AGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCA...TTCTTGATCAACCAGATGATTAAACGTTGTATTAAAAAGACCCCGTGTAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR GCA 90 bp TTAATCATCTGGTTGATCAAGAAATGCAATGCTCAGTCTAGGAACAGCAGCAGATGGTTGATCAAGAAATaGAATGCTCAGTCTAGGAAC +
Preference number: 4 (lower is better)
Translates to: LIIWLIKKCNAQSRNSSRWLIKK*NAQSRN
Trigger: GTTCCTAGACTGAGCATTGCATTTCTTGATCAACCA...TCTGCTGCTGTTCCTAGACTGAGCATTGCATTTCTTGATCAACCAGATGATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
3UTR CAA 72 bp CACGGGGTCTTTTTAATACAACGTTTAATCATCTGGTaGATCAAGAAATGCAATGCTCAGTCTAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: HGVFLIQRLIIW*IKKCNAQSRNS
Trigger: GCTGTTCCTAGACTGAGCATTGCATTTCTTGATCAACCAGATGATTAAACGTTGTATTAAAAAGACCCCGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp GGGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGTCCTTCTCCTCCCGCTaGATCTCGCTGGCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: GDTLLVLQQGRTHSPRPSSFSSR*ISLAAA
Trigger: GGCGGCCGCCAGCGAGATCAAGCGGGAGGAGAAGGA...CGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp GGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGTGGCCTGGGGAGGGCGTaGTGTAGGGTAGCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: GTPCWFCSRVGRTAQGLRGLGRA*CRVALG
Trigger: CCCCAGGGCTACCCTACACAACGCCCTCCCCAGGCC...ACGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp GGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGTGGATGCTCCCCAGCATaGGGGGAGGCTGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: GTPCWFCSRVGRTAQGLRGCSPA*GEAGQA
Trigger: GGCCTGGCCAGCCTCCCCCAATGCTGGGGAGCATCC...ACGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TCAGACCAGCACAGTCCCCCGGCTCCAGCCACTCTTGCCCTTGGACCACACAGACGCTCCCGGGCGTTATaGGCCACCCGGCGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SDQHSPPAPATLALGPHRRSRAL*ATRRSF
Trigger: GAAGGAGCGCCGGGTGGCCAATAACGCCCGGGAGCG...TCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCGGGGGACTGTGCTGGTCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262965.12
ENST00000592628.5
ENST00000593064.5
CDS-3UTR CAA 90 bp TCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGGCACGGGCCTGGGGAGGGCGTaGTGTAGGGTAGCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: SGSPGSPGGNGGSLRSGTGLGRA*CRVALG
Trigger: CCCCAGGGCTACCCTACACAACGCCCTCCCCAGGCC...CGTGCCACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp CCAGGCCCACACCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGGGATGCTCCCCAGCATaGGGGGAGGCTGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: PGPHLGATVTTALVRVELGCSPA*GEAGQA
Trigger: GGCCTGGCCAGCCTCCCCCAATGCTGGGGAGCATCC...CAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp GGGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGCAGCCACTCTTGCCCTaGGACCACACAGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: GDTLLVLQQGRTHSPRPSQPLLP*DHTEGG
Trigger: CCCTCCCTCTGTGTGGTCCAAGGGCAAGAGTGGCTG...CGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp GGGAGTCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGCGCTCCCGCGCGTTATaGGCCATGCGCCTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: GSQAVQDLLGVTVGVSGVRSRAL*AMRLSR
Trigger: CCGGGAGAGGCGCATGGCCAATAACGCGCGGGAGCG...CACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGACTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CAA 90 bp GAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGCCCCCCGCTCACCGCTCTaGCCTGGCGCTGTGCGTGCA +
Preference number: 5 (lower is better)
Translates to: ELALRFPLHLPWGPGSQAPRSPL*PGAVRA
Trigger: TGCACGCACAGCGCCAGGCAAGAGCGGTGAGCGGGG...GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000453954.6
CDS GCA 90 bp CTTGCCTGGCGCTGTGCGTGCACTGACCATGCCAAGGCCCACGTCTaGACATCTGTGCACAGCAGAGGGACCGCACCAGGCCAGGCACTC +
Preference number: 5 (lower is better)
Translates to: LAWRCACTDHAKAHV*TSVHSRGTAPGQAL
Trigger: GAGTGCCTGGCCTGGTGCGGTCCCTCTGCTGTGCACAGATGTGCAGACGTGGGCCTTGGCATGGTCAGTGCACGCACAGCGCCAGGCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453954.6
CDS-3UTR CAA 90 bp GAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGCCTCCTTCTCCTCCCGCTaGATCTCGCTGGCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: ELALRFPLHLPWGPGSQASFSSR*ISLAAA
Trigger: GGCGGCCGCCAGCGAGATCAAGCGGGAGGAGAAGGA...GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGGCACGATGTGCCCGGCGGGGTaGTGGGCTTCGCTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: SGSPGSPGGNGGSLRSGTMCPAG*WASLRP
Trigger: AGGCCTGAGCGAAGCCCACAACCCCGCCGGGCACAT...CGTGCCACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp CTTAAGAGATCAAACTCCCAGGGCGTAGGGGAAGCCACCGAGAAGGGAGAGGCACCCCGCTCACCGCTCTaGCCTCCGAGTCCCGGTCCC +
Preference number: 5 (lower is better)
Translates to: LKRSNSQGVGEATEKGEAPRSPL*PPSPGP
Trigger: GGGACCGGGACTCGGAGGCAAGAGCGGTGAGCGGGG...TGCCTCTCCCTTCTCGGTGGCTTCCCCTACGCCCTGGGAGTTTGATCTCTTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262965.12
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CAA 90 bp ATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCCCCGCTCACCGCTCTaGCCTCCGAGTCCCGGTCCC +
Preference number: 5 (lower is better)
Translates to: ILCRTHSSRGYGATAHPDPRSPL*PPSPGP
Trigger: GGGACCGGGACTCGGAGGCAAGAGCGGTGAGCGGGG...GTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262965.12
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CAA 90 bp CCTGGCCTGGACTGGGGGCAGATACCAGGCATTGAGCTGGCCTTGAGGTTTCCCATCGAGGCCAGTGCTTaGCCGAGGGCATCCCCGGAG +
Preference number: 5 (lower is better)
Translates to: PGLDWGQIPGIELALRFPIEASA*PRASPE
Trigger: CTCCGGGGATGCCCTCGGCAAAGCACTGGCCTCGAT...GGGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTGCCCCCAGTCCAGGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CAA 90 bp GGGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGTGCAGGATGAGCAGCTaGGTCTGCGCTTTGTCCGAC +
Preference number: 5 (lower is better)
Translates to: GDTLLVLQQGRTHSPRPSCRMSS*VCALSD
Trigger: GTCGGACAAAGCGCAGACCAAGCTGCTCATCCTGCA...CGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CAA 90 bp CTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCTTATGTGCCCGGCGGGGTaGTGGGCTTCGCTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: LCRTHSSRGYGATAHPDLMCPAG*WASLRP
Trigger: AGGCCTGAGCGAAGCCCACAACCCCGCCGGGCACAT...AAGGTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587425.5
ENST00000592395.5
CDS-3UTR CAA 90 bp TGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGGGATGCTCCCCAGCATaGGGGGAGGCTGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: CPVLAPEQHPLSQSSEHEGCSPA*GEAGQA
Trigger: GGCCTGGCCAGCCTCCCCCAATGCTGGGGAGCATCC...CTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TCAGGCAGTCCAGGATCTCCTGGGGGTAACGGTGGGAGTCTCAGGAGTGGCACGCAGCCACTCTTGCCCTaGGACCACACAGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: SGSPGSPGGNGGSLRSGTQPLLP*DHTEGG
Trigger: CCCTCCCTCTGTGTGGTCCAAGGGCAAGAGTGGCTG...CGTGCCACTCCTGAGACTCCCACCGTTACCCCCAGGAGATCCTGGACTGCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp GAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGCCCGGCTCCAGCCACTCTaGCCCTTGGACCACACAGAG +
Preference number: 5 (lower is better)
Translates to: ELALRFPLHLPWGPGSQARLQPL*PLDHTE
Trigger: CTCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCG...GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp CTGGGGCAAAGGAGTGAAGGACAGGGTGTCCAGGAGGTCCCCAGCACCGGGCTCGCCTTGAGGTTTCCCTaGCATCTACCATGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: LGQRSEGQGVQEVPSTGLALRFP*HLPWGP
Trigger: TGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGC...GAGCCCGGTGCTGGGGACCTCCTGGACACCCTGTCCTTCACTCCTTTGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp AATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACGCTCCCGGGCGTTATaGGCCACCCGGCGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: NSMQNAQFQRLWGHCPPRRSRAL*ATRRSF
Trigger: GAAGGAGCGCCGGGTGGCCAATAACGCCCGGGAGCG...TCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000587425.5
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
CDS-3UTR CAA 90 bp CCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGAATGTGCCCGGCGGGGTaGTGGGCTTCGCTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: PKTVPSQLGRAGYPHGKRMCPAG*WASLRP
Trigger: AGGCCTGAGCGAAGCCCACAACCCCGCCGGGCACAT...TCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp ATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACATGTGCCCGGCGGGGTaGTGGGCTTCGCTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: ILCRTHSSRGYGATAHPDMCPAG*WASLRP
Trigger: AGGCCTGAGCGAAGCCCACAACCCCGCCGGGCACAT...GTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp GCAGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCGGCCTGGGGAGGGCGTaGTGTAGGGTAGCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: AVLNPRQSPASWEELVTLGLGRA*CRVALG
Trigger: CCCCAGGGCTACCCTACACAACGCCCTCCCCAGGCC...GAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCGGCCTGGGGAGGGCGTaGTGTAGGGTAGCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: LNSMQNAQFQRLWGHCPPGLGRA*CRVALG
Trigger: CCCCAGGGCTACCCTACACAACGCCCTCCCCAGGCC...GGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp AAACAAAAGACCCGCCGCCTGTCCCCGTTCTGTCTGTGTGCAGTGGCTTCCGGGCGGCTCCAGCCACTCTaGCCCTTGGACCACACAGAG +
Preference number: 5 (lower is better)
Translates to: KQKTRRLSPFCLCAVASGRLQPL*PLDHTE
Trigger: CTCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCG...CCCGGAAGCCACTGCACACAGACAGAACGGGGACAGGCGGCGGGTCTTTTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp GGTGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGCCCCGCTCACCGCTCTaGCCTGAACCTCCGAACTGC +
Preference number: 5 (lower is better)
Translates to: GVLCWLLSSILSARVQSMPRSPL*PEPPNC
Trigger: GCAGTTCGGAGGTTCAGGCAAGAGCGGTGAGCGGGG...CATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344749.9
CDS-3UTR CAA 90 bp TTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCCGCTCCCGCGCGTTATaGGCCATGCGCCTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: LNSMQNAQFQRLWGHCPPRSRAL*AMRLSR
Trigger: CCGGGAGAGGCGCATGGCCAATAACGCGCGGGAGCG...GGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR CAA 90 bp GGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGTTGCGCTTTGTCCGACTaGAGGTGCATCTGGCACATG +
Preference number: 5 (lower is better)
Translates to: GTPCWFCSRVGRTAQGLRCALSD*RCIWHM
Trigger: CATGTGCCAGATGCACCTCAAGTCGGACAAAGCGCA...ACGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CAA 90 bp TGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGATCGAGGCCAGTGCTTaGCCGAGGGCATCCCCGGAG +
Preference number: 5 (lower is better)
Translates to: CPVLAPEQHPLSQSSEHEIEASA*PRASPE
Trigger: CTCCGGGGATGCCCTCGGCAAAGCACTGGCCTCGAT...CTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CAA 90 bp TTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCTCCTTCTCCTCCCGCTaGATCTCGCTGGCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: FKPKTVPSQLGRAGYPHGSFSSR*ISLAAA
Trigger: GGCGGCCGCCAGCGAGATCAAGCGGGAGGAGAAGGA...GCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp AATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGATCCTTCTCCTCCCGCTaGATCTCGCTGGCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: NSMQNAQFQRLWGHCPPRSFSSR*ISLAAA
Trigger: GGCGGCCGCCAGCGAGATCAAGCGGGAGGAGAAGGA...TCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp GGGACACCCTGCTGGTTCTGCAGCAGGGTCGGACGCACAGCCCAAGGCCTTCGTGGCATTGAGCTGGCCTaGAGGTTTCCCTTGCATCTA +
Preference number: 5 (lower is better)
Translates to: GTPCWFCSRVGRTAQGLRGIELA*RFPLHL
Trigger: TAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCC...ACGAAGGCCTTGGGCTGTGCGTCCGACCCTGCTGCAGAACCAGCAGGGTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp CCAGGCCCACACCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGTGCAGGATGAGCAGCTaGGTCTGCGCTTTGTCCGAC +
Preference number: 5 (lower is better)
Translates to: PGPHLGATVTTALVRVELCRMSS*VCALSD
Trigger: GTCGGACAAAGCGCAGACCAAGCTGCTCATCCTGCA...CAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS GCA 90 bp CTGGGAGCAGGCGCAGGGAAGCTGGAATTCCAGAGTCTAGGTCCCTaGAGAGTCCTCCCCAGAGACCACAGGGAGTCTGAAAAATGGGGG +
Preference number: 5 (lower is better)
Translates to: LGAGAGKLEFQSLGP*RVLPRDHRESEKWG
Trigger: CCCCCATTTTTCAGACTCCCTGTGGTCTCTGGGGAGGACTCTGCAGGGACCTAGACTCTGGAATTCCAGCTTCCCTGCGCCTGCTCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587235.6
CDS-3UTR CAA 90 bp TTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCTCCTTCTCCTCCCGCTaGATCTCGCTGGCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: FEFYAERTVPEAMGPLPTSFSSR*ISLAAA
Trigger: GGCGGCCGCCAGCGAGATCAAGCGGGAGGAGAAGGA...GGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCATGTGCCCGGCGGGGTaGTGGGCTTCGCTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: FEFYAERTVPEAMGPLPTMCPAG*WASLRP
Trigger: AGGCCTGAGCGAAGCCCACAACCCCGCCGGGCACAT...GGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp ACTTGCAGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACGGATGCTCCCCAGCATaGGGGGAGGCTGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: TCSFKPKTVPSQLGRAGYGCSPA*GEAGQA
Trigger: GGCCTGGCCAGCCTCCCCCAATGCTGGGGAGCATCC...GTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACTGCAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGCAGCCACTCTTGCCCTaGGACCACACAGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: CPVLAPEQHPLSQSSEHEQPLLP*DHTEGG
Trigger: CCCTCCCTCTGTGTGGTCCAAGGGCAAGAGTGGCTG...CTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCGCTCCCGCGCGTTATaGGCCATGCGCCTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: SRLNSMQNAQFQRLWGHCRSRAL*AMRLSR
Trigger: CCGGGAGAGGCGCATGGCCAATAACGCGCGGGAGCG...GCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR CAA 90 bp AGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATCGCTCCCGCGCGTTATaGGCCATGCGCCTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: SFKPKTVPSQLGRAGYPHRSRAL*AMRLSR
Trigger: CCGGGAGAGGCGCATGGCCAATAACGCGCGGGAGCG...ATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CAA 90 bp GGCATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCTGCAGGATGAGCAGCTaGGTCTGCGCTTTGTCCGAC +
Preference number: 5 (lower is better)
Translates to: GIELALRFPLHLPWGPGSCRMSS*VCALSD
Trigger: GTCGGACAAAGCGCAGACCAAGCTGCTCATCCTGCA...GGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CAA 90 bp TTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCGCTCCCGGGCGTTATaGGCCACCCGGCGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: FLLALGESRLNSMQNAQFRSRAL*ATRRSF
Trigger: GAAGGAGCGCCGGGTGGCCAATAACGCCCGGGAGCG...GAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000587425.5
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
CDS-3UTR CAA 90 bp ACTTGCAGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACATGTGCCCGGCGGGGTaGTGGGCTTCGCTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: TCSFKPKTVPSQLGRAGYMCPAG*WASLRP
Trigger: AGGCCTGAGCGAAGCCCACAACCCCGCCGGGCACAT...GTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACTGCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp CAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGACCAGAAACAGCCACTCTTGCCCTaGGACCACACAGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: QSPASWEELVTLMAKDQKQPLLP*DHTEGG
Trigger: CCCTCCCTCTGTGTGGTCCAAGGGCAAGAGTGGCTG...TTTCTGGTCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp AATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACGGCTCCAGCCACTCTaGCCCTTGGACCACACAGAG +
Preference number: 5 (lower is better)
Translates to: NSMQNAQFQRLWGHCPPRRLQPL*PLDHTE
Trigger: CTCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCG...TCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCCGGCTCCAGCCACTCTaGCCCTTGGACCACACAGAG +
Preference number: 5 (lower is better)
Translates to: FKPKTVPSQLGRAGYPHGRLQPL*PLDHTE
Trigger: CTCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCG...GCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp GCAGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCCGGCTCCAGCCACTCTaGCCCTTGGACCACACAGAG +
Preference number: 5 (lower is better)
Translates to: AVLNPRQSPASWEELVTLRLQPL*PLDHTE
Trigger: CTCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCG...GAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp CCAGGCCCACACCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGGGCATTGAGCTGGCCTaGAGGTTTCCCTTGCATCTA +
Preference number: 5 (lower is better)
Translates to: PGPHLGATVTTALVRVELGIELA*RFPLHL
Trigger: TAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCC...CAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp AGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCGCTCCCGGGCGTTATaGGCCACCCGGCGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: RNCCFFLLALGESRLNSMRSRAL*ATRRSF
Trigger: GAAGGAGCGCCGGGTGGCCAATAACGCCCGGGAGCG...CATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000587425.5
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
CDS-3UTR CAA 90 bp TGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACGCTCCCGGGCGTTATaGGCCACCCGGCGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: CFFLLALGESRLNSMQNARSRAL*ATRRSF
Trigger: GAAGGAGCGCCGGGTGGCCAATAACGCCCGGGAGCG...TGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000587425.5
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
CDS-3UTR CAA 90 bp TTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGATGTGCCCGGCGGGGTaGTGGGCTTCGCTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: FFLLALGESRLNSMQNAQMCPAG*WASLRP
Trigger: AGGCCTGAGCGAAGCCCACAACCCCGCCGGGCACAT...CTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp CTGGGGCAAAGGAGTGAAGGACAGGGTGTCCAGGAGGTCCCCAGCACCGGGCTCTCCACAGCATCCCCCTaGAGTGATATGTTTCCATTT +
Preference number: 5 (lower is better)
Translates to: LGQRSEGQGVQEVPSTGLSTASP*SDMFPF
Trigger: AAATGGAAACATATCACTCAAGGGGGATGCTGTGGA...GAGCCCGGTGCTGGGGACCTCCTGGACACCCTGTCCTTCACTCCTTTGCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCAGGATGCTCCCCAGCATaGGGGGAGGCTGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: CFFLLALGESRLNSMQNAGCSPA*GEAGQA
Trigger: GGCCTGGCCAGCCTCCCCCAATGCTGGGGAGCATCC...TGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp GCAATGCTCAGTCTAGGAACAGCAGCAGAAATAGCGAGAGACACGGGACTTTTAGGATGCTCCCCAGCATaGGGGGAGGCTGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: AMLSLGTAAEIARDTGLLGCSPA*GEAGQA
Trigger: GGCCTGGCCAGCCTCCCCCAATGCTGGGGAGCATCC...TAAAAGTCCCGTGTCTCTCGCTATTTCTGCTGCTGTTCCTAGACTGAGCATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp GGAGAGGATGCGGCAGGGAAGCCCCAAGGTGCCTTCATCAGGGAACGCCCACGCCTGGGTGAATCTCGTTaGAATTCTATGCAGAACGCA +
Preference number: 5 (lower is better)
Translates to: GEDAAGKPQGAFIRERPRLGESR*NSMQNA
Trigger: TGCGTTCTGCATAGAATTCAAACGAGATTCACCCAG...GCGTGGGCGTTCCCTGATGAAGGCACCTTGGGGCTTCCCTGCCGCATCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp CCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGCCTAGCTTGGTCTGCGCTTaGTCCGACTTGAGGTGCATC +
Preference number: 5 (lower is better)
Translates to: PVLAPEQHPLSQSSEHEPSLVCA*SDLRCI
Trigger: GATGCACCTCAAGTCGGACAAAGCGCAGACCAAGCT...AGGCTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CAA 90 bp CCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCAAAAGATGCAGGATGAGCAGCTaGGTCTGCGCTTTGTCCGAC +
Preference number: 5 (lower is better)
Translates to: PKTVPSQLGRAGYPHGKRCRMSS*VCALSD
Trigger: GTCGGACAAAGCGCAGACCAAGCTGCTCATCCTGCA...TCTTTTGCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CAA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCCCCCGCTCACCGCTCTaGCCTCCGAGTCCCGGTCCC +
Preference number: 5 (lower is better)
Translates to: RISQVSTASPLSDMFPFLPRSPL*PPSPGP
Trigger: GGGACCGGGACTCGGAGGCAAGAGCGGTGAGCGGGG...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262965.12
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CAA 90 bp AAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGGGCGTAGGGCAGCCACTCTTGCCCTaGGACCACACAGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: KQEGEASSLKRSNSQGVGQPLLP*DHTEGG
Trigger: CCCTCCCTCTGTGTGGTCCAAGGGCAAGAGTGGCTG...CCCTACGCCCTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCGGCTCCAGCCACTCTaGCCCTTGGACCACACAGAG +
Preference number: 5 (lower is better)
Translates to: SRLNSMQNAQFQRLWGHCRLQPL*PLDHTE
Trigger: CTCTGTGTGGTCCAAGGGCAAGAGTGGCTGGAGCCG...GCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp CTTAAGAGATCAAACTCCCAGGGCGTAGGGGAAGCCACCGAGAAGGGAGAGGCAAGCTTGGTCTGCGCTTaGTCCGACTTGAGGTGCATC +
Preference number: 5 (lower is better)
Translates to: LKRSNSQGVGEATEKGEASLVCA*SDLRCI
Trigger: GATGCACCTCAAGTCGGACAAAGCGCAGACCAAGCT...TGCCTCTCCCTTCTCGGTGGCTTCCCCTACGCCCTGGGAGTTTGATCTCTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CAA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCCGCTCCCGGGCGTTATaGGCCACCCGGCGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: RISQVSTASPLSDMFPFLRSRAL*ATRRSF
Trigger: GAAGGAGCGCCGGGTGGCCAATAACGCCCGGGAGCG...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262965.12
ENST00000593064.5
ENST00000651991.1
CDS-3UTR CAA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCGGCCTGGGGAGGGCGTaGTGTAGGGTAGCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: RISQVSTASPLSDMFPFLGLGRA*CRVALG
Trigger: CCCCAGGGCTACCCTACACAACGCCCTCCCCAGGCC...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp ATTGAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGGCATTGAGCTGGCCTaGAGGTTTCCCTTGCATCTA +
Preference number: 5 (lower is better)
Translates to: IELALRFPLHLPWGPGSQGIELA*RFPLHL
Trigger: TAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCC...TTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp CCAGGCCCCTGGCATCCTGTCTACGTCACGATGGCCCTCTGGTGTAATGGGGACCTGGGTGAATCTCGTTaGAATTCTATGCAGAACGCA +
Preference number: 5 (lower is better)
Translates to: PGPWHPVYVTMALWCNGDLGESR*NSMQNA
Trigger: TGCGTTCTGCATAGAATTCAAACGAGATTCACCCAG...GTCCCCATTACACCAGAGGGCCATCGTGACGTAGACAGGATGCCAGGGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp GAGCTGGCCTTGAGGTTTCCCTTGCATCTACCATGGGGCCCAGGCTCCCAAGCCCTGGGTGAATCTCGTTaGAATTCTATGCAGAACGCA +
Preference number: 5 (lower is better)
Translates to: ELALRFPLHLPWGPGSQALGESR*NSMQNA
Trigger: TGCGTTCTGCATAGAATTCAAACGAGATTCACCCAG...GGCTTGGGAGCCTGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGCCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp CCAGGCCCACACCTGGGTGCCACAGTGACCACTGCCCTAGTTCGTGTGGAACTGCTGGGTGAATCTCGTTaGAATTCTATGCAGAACGCA +
Preference number: 5 (lower is better)
Translates to: PGPHLGATVTTALVRVELLGESR*NSMQNA
Trigger: TGCGTTCTGCATAGAATTCAAACGAGATTCACCCAG...CAGTTCCACACGAACTAGGGCAGTGGTCACTGTGGCACCCAGGTGTGGGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp AATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGAAGCTTGGTCTGCGCTTaGTCCGACTTGAGGTGCATC +
Preference number: 5 (lower is better)
Translates to: NSMQNAQFQRLWGHCPPRSLVCA*SDLRCI
Trigger: GATGCACCTCAAGTCGGACAAAGCGCAGACCAAGCT...TCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR CAA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCTCCTTCTCCTCCCGCTaGATCTCGCTGGCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: RISQVSTASPLSDMFPFLSFSSR*ISLAAA
Trigger: GGCGGCCGCCAGCGAGATCAAGCGGGAGGAGAAGGA...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000590436.5
ENST00000590684.5
ENST00000593064.5
ENST00000611869.5
ENST00000651991.1
CDS-3UTR CAA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCATGTGCCCGGCGGGGTaGTGGGCTTCGCTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: RISQVSTASPLSDMFPFLMCPAG*WASLRP
Trigger: AGGCCTGAGCGAAGCCCACAACCCCGCCGGGCACAT...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000590436.5
ENST00000590684.5
ENST00000593064.5
ENST00000611869.5
ENST00000651991.1
CDS-3UTR CAA 90 bp TGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACCAGCCACTCTTGCCCTaGGACCACACAGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: CCFFLLALGESRLNSMQNQPLLP*DHTEGG
Trigger: CCCTCCCTCTGTGTGGTCCAAGGGCAAGAGTGGCTG...GTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp GCAATGCTCAGTCTAGGAACAGCAGCAGAAATAGCGAGAGACACGGGACTTTTACAGCCACTCTTGCCCTaGGACCACACAGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: AMLSLGTAAEIARDTGLLQPLLP*DHTEGG
Trigger: CCCTCCCTCTGTGTGGTCCAAGGGCAAGAGTGGCTG...TAAAAGTCCCGTGTCTCTCGCTATTTCTGCTGCTGTTCCTAGACTGAGCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp AGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGCCTTGAGGTTTCCCTaGCATCTACCATGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: SFKPKTVPSQLGRAGYPHALRFP*HLPWGP
Trigger: TGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGC...ATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp CCCAGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTGCCTTGAGGTTTCCCTaGCATCTACCATGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: PRNCCFFLLALGESRLNSALRFP*HLPWGP
Trigger: TGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGC...AGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCTGCAGGATGAGCAGCTaGGTCTGCGCTTTGTCCGAC +
Preference number: 5 (lower is better)
Translates to: SRLNSMQNAQFQRLWGHCCRMSS*VCALSD
Trigger: GTCGGACAAAGCGCAGACCAAGCTGCTCATCCTGCA...GCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCCGTACTGCTCGCACTaGCTGCTCCAAGTTCAGGAT +
Preference number: 5 (lower is better)
Translates to: FEFYAERTVPEAMGPLPTPYCSH*LLQVQD
Trigger: ATCCTGAACTTGGAGCAGCAAGTGCGAGCAGTACGG...GGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592395.5
CDS GCA 90 bp AACTCCCCCAGGGAACACCAGGGCATCAAGTTGCCAAGTTTAAACTaGACGCAGGGCAGCCAGAACCTCTCCTTTCTCCAACTCTCTCAT +
Preference number: 5 (lower is better)
Translates to: NSPREHQGIKLPSLN*TQGSQNLSFLQLSH
Trigger: ATGAGAGAGTTGGAGAAAGGAGAGGTTCTGGCTGCCCTGCGTGCAGTTTAAACTTGGCAACTTGATGCCCTGGTGTTCCCTGGGGGAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587235.6
CDS-3UTR CAA 90 bp GGTGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGTCCACAGCATCCCCCTaGAGTGATATGTTTCCATTT +
Preference number: 5 (lower is better)
Translates to: GVLCWLLSSILSARVQSMSTASP*SDMFPF
Trigger: AAATGGAAACATATCACTCAAGGGGGATGCTGTGGA...CATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp CCTGGCCTGGACTGGGGGCAGATACCAGGCATTGAGCTGGCCTTGAGGTTTCCCCCAAAGGCAGCATCCTaGCTAATTTTCATCTACATT +
Preference number: 5 (lower is better)
Translates to: PGLDWGQIPGIELALRFPPKAAS*LIFIYI
Trigger: AATGTAGATGAAAATTAGCAAGGATGCTGCCTTTGG...GGGAAACCTCAAGGCCAGCTCAATGCCTGGTATCTGCCCCCAGTCCAGGCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCGCCTTGAGGTTTCCCTaGCATCTACCATGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: FLLALGESRLNSMQNAQFALRFP*HLPWGP
Trigger: TGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGC...GAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp AGTTTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATTGCGCTTTGTCCGACTaGAGGTGCATCTGGCACATG +
Preference number: 5 (lower is better)
Translates to: SFKPKTVPSQLGRAGYPHCALSD*RCIWHM
Trigger: CATGTGCCAGATGCACCTCAAGTCGGACAAAGCGCA...ATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CAA 90 bp TCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCTGCGCTTTGTCCGACTaGAGGTGCATCTGGCACATG +
Preference number: 5 (lower is better)
Translates to: SRLNSMQNAQFQRLWGHCCALSD*RCIWHM
Trigger: CATGTGCCAGATGCACCTCAAGTCGGACAAAGCGCA...GCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGAGTCCACAGCATCCCCCTaGAGTGATATGTTTCCATTT +
Preference number: 5 (lower is better)
Translates to: CPVLAPEQHPLSQSSEHESTASP*SDMFPF
Trigger: AAATGGAAACATATCACTCAAGGGGGATGCTGTGGA...CTCATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp AGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGGCCTTGAGGTTTCCCTaGCATCTACCATGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: RNCCFFLLALGESRLNSMALRFP*HLPWGP
Trigger: TGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGC...CATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp AAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGGGCGTAGGGGGCATTGAGCTGGCCTaGAGGTTTCCCTTGCATCTA +
Preference number: 5 (lower is better)
Translates to: KQEGEASSLKRSNSQGVGGIELA*RFPLHL
Trigger: TAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCC...CCCTACGCCCTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp ATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCTGGGTGAATCTCGTTaGAATTCTATGCAGAACGCA +
Preference number: 5 (lower is better)
Translates to: ILCRTHSSRGYGATAHPDLGESR*NSMQNA
Trigger: TGCGTTCTGCATAGAATTCAAACGAGATTCACCCAG...GTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTGCGCTTTGTCCGACTaGAGGTGCATCTGGCACATG +
Preference number: 5 (lower is better)
Translates to: FFLLALGESRLNSMQNAQCALSD*RCIWHM
Trigger: CATGTGCCAGATGCACCTCAAGTCGGACAAAGCGCA...CTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCTCGCTTAGGCACAATTaGCTGGTGGCTTTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: FKPKTVPSQLGRAGYPHGSLRHN*LVALEE
Trigger: TTCTTCTAAAGCCACCAGCAAATTGTGCCTAAGCGA...GCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp GGTGTCCTGTGCTGGCTCCTGAGCAGCATCCTCTCAGCCAGAGTTCAGAGCATGCCAAAGGCAGCATCCTaGCTAATTTTCATCTACATT +
Preference number: 5 (lower is better)
Translates to: GVLCWLLSSILSARVQSMPKAAS*LIFIYI
Trigger: AATGTAGATGAAAATTAGCAAGGATGCTGCCTTTGG...CATGCTCTGAACTCTGGCTGAGAGGATGCTGCTCAGGAGCCAGCACAGGACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp AAACAAAAGACCCGCCGCCTGTCCCCGTTCTGTCTGTGTGCAGTGGCTTCCGGGCGTTTAATCATCTGGTaGATCAAGAAATGCAATGCT +
Preference number: 5 (lower is better)
Translates to: KQKTRRLSPFCLCAVASGRLIIW*IKKCNA
Trigger: AGCATTGCATTTCTTGATCAACCAGATGATTAAACG...CCCGGAAGCCACTGCACACAGACAGAACGGGGACAGGCGGCGGGTCTTTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCATGCGCTTTGTCCGACTaGAGGTGCATCTGGCACATG +
Preference number: 5 (lower is better)
Translates to: CFFLLALGESRLNSMQNACALSD*RCIWHM
Trigger: CATGTGCCAGATGCACCTCAAGTCGGACAAAGCGCA...TGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR CAA 90 bp GCAATGCTCAGTCTAGGAACAGCAGCAGAAATAGCGAGAGACACGGGACTTTTAAGCTTGGTCTGCGCTTaGTCCGACTTGAGGTGCATC +
Preference number: 5 (lower is better)
Translates to: AMLSLGTAAEIARDTGLLSLVCA*SDLRCI
Trigger: GATGCACCTCAAGTCGGACAAAGCGCAGACCAAGCT...TAAAAGTCCCGTGTCTCTCGCTATTTCTGCTGCTGTTCCTAGACTGAGCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CAA 90 bp TGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCAAGCTTGGTCTGCGCTTaGTCCGACTTGAGGTGCATC +
Preference number: 5 (lower is better)
Translates to: CFFLLALGESRLNSMQNASLVCA*SDLRCI
Trigger: GATGCACCTCAAGTCGGACAAAGCGCAGACCAAGCT...TGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592395.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCTCGCTTAGGCACAATTaGCTGGTGGCTTTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: FEFYAERTVPEAMGPLPTSLRHN*LVALEE
Trigger: TTCTTCTAAAGCCACCAGCAAATTGTGCCTAAGCGA...GGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp ATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCAGACCCAAAGGCAGCATCCTaGCTAATTTTCATCTACATT +
Preference number: 5 (lower is better)
Translates to: ILCRTHSSRGYGATAHPDPKAAS*LIFIYI
Trigger: AATGTAGATGAAAATTAGCAAGGATGCTGCCTTTGG...GTCTGGGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp AGGTTTACACGGGGTCTTTTTAATACAACGTTTAATCATCTGGTTGATCAAGAAGGATGCTCCCCAGCATaGGGGGAGGCTGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: RFTRGLFNTTFNHLVDQEGCSPA*GEAGQA
Trigger: GGCCTGGCCAGCCTCCCCCAATGCTGGGGAGCATCC...TTCTTGATCAACCAGATGATTAAACGTTGTATTAAAAAGACCCCGTGTAAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCGCCTTGAGGTTTCCCTaGCATCTACCATGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: RISQVSTASPLSDMFPFLALRFP*HLPWGP
Trigger: TGGGCCCCATGGTAGATGCAAGGGAAACCTCAAGGC...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp AGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGGGCATTGAGCTGGCCTaGAGGTTTCCCTTGCATCTA +
Preference number: 5 (lower is better)
Translates to: RNCCFFLLALGESRLNSMGIELA*RFPLHL
Trigger: TAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCC...CATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000588136.7
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCACCCTGGGTGAATCTCGTTaGAATTCTATGCAGAACGCA +
Preference number: 5 (lower is better)
Translates to: FEFYAERTVPEAMGPLPTLGESR*NSMQNA
Trigger: TGCGTTCTGCATAGAATTCAAACGAGATTCACCCAG...GGTGGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCTCGCTTAGGCACAATTaGCTGGTGGCTTTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: SRLNSMQNAQFQRLWGHCSLRHN*LVALEE
Trigger: TTCTTCTAAAGCCACCAGCAAATTGTGCCTAAGCGA...GCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCCCGTACTGCTCGCACTaGCTGCTCCAAGTTCAGGAT +
Preference number: 5 (lower is better)
Translates to: RISQVSTASPLSDMFPFLPYCSH*LLQVQD
Trigger: ATCCTGAACTTGGAGCAGCAAGTGCGAGCAGTACGG...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651991.1
CDS-3UTR CAA 90 bp TTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCTCCACAGCATCCCCCTaGAGTGATATGTTTCCATTT +
Preference number: 5 (lower is better)
Translates to: FLLALGESRLNSMQNAQFSTASP*SDMFPF
Trigger: AAATGGAAACATATCACTCAAGGGGGATGCTGTGGA...GAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCTCGCTTAGGCACAATTaGCTGGTGGCTTTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: FLLALGESRLNSMQNAQFSLRHN*LVALEE
Trigger: TTCTTCTAAAGCCACCAGCAAATTGTGCCTAAGCGA...GAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCCCCCAAAGGCAGCATCCTaGCTAATTTTCATCTACATT +
Preference number: 5 (lower is better)
Translates to: SFEFYAERTVPEAMGPLPPKAAS*LIFIYI
Trigger: AATGTAGATGAAAATTAGCAAGGATGCTGCCTTTGG...GGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TTTAAACCCAAGACAGTCCCCAGCCAGCTGGGAAGAGCTGGTTACCCTCATGGCCGTTTAATCATCTGGTaGATCAAGAAATGCAATGCT +
Preference number: 5 (lower is better)
Translates to: FKPKTVPSQLGRAGYPHGRLIIW*IKKCNA
Trigger: AGCATTGCATTTCTTGATCAACCAGATGATTAAACG...GCCATGAGGGTAACCAGCTCTTCCCAGCTGGCTGGGGACTGTCTTGGGTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCGGCATTGAGCTGGCCTaGAGGTTTCCCTTGCATCTA +
Preference number: 5 (lower is better)
Translates to: RISQVSTASPLSDMFPFLGIELA*RFPLHL
Trigger: TAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCC...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGCTGGGTGAATCTCGTTaGAATTCTATGCAGAACGCA +
Preference number: 5 (lower is better)
Translates to: FFLLALGESRLNSMQNAQLGESR*NSMQNA
Trigger: TGCGTTCTGCATAGAATTCAAACGAGATTCACCCAG...CTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TTAATCATCTGGTTGATCAAGAAATGCAATGCTCAGTCTAGGAACAGCAGCAGATGCAGGATGAGCAGCTaGGTCTGCGCTTTGTCCGAC +
Preference number: 5 (lower is better)
Translates to: LIIWLIKKCNAQSRNSSRCRMSS*VCALSD
Trigger: GTCGGACAAAGCGCAGACCAAGCTGCTCATCCTGCA...TCTGCTGCTGTTCCTAGACTGAGCATTGCATTTCTTGATCAACCAGATGATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CAA 90 bp GCAATGCTCAGTCTAGGAACAGCAGCAGAAATAGCGAGAGACACGGGACTTTTATCCACAGCATCCCCCTaGAGTGATATGTTTCCATTT +
Preference number: 5 (lower is better)
Translates to: AMLSLGTAAEIARDTGLLSTASP*SDMFPF
Trigger: AAATGGAAACATATCACTCAAGGGGGATGCTGTGGA...TAAAAGTCCCGTGTCTCTCGCTATTTCTGCTGCTGTTCCTAGACTGAGCATTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp AGGAACTGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGTCGCTTAGGCACAATTaGCTGGTGGCTTTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: RNCCFFLLALGESRLNSMSLRHN*LVALEE
Trigger: TTCTTCTAAAGCCACCAGCAAATTGTGCCTAAGCGA...CATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCAGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TGCTGTTTCTTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACCTGGGTGAATCTCGTTaGAATTCTATGCAGAACGCA +
Preference number: 5 (lower is better)
Translates to: CCFFLLALGESRLNSMQNLGESR*NSMQNA
Trigger: TGCGTTCTGCATAGAATTCAAACGAGATTCACCCAG...GTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAAGAAACAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000453954.6
ENST00000587425.5
ENST00000588136.7
ENST00000592395.5
ENST00000592628.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TTAATCATCTGGTTGATCAAGAAATGCAATGCTCAGTCTAGGAACAGCAGCAGAAGCTTGGTCTGCGCTTaGTCCGACTTGAGGTGCATC +
Preference number: 5 (lower is better)
Translates to: LIIWLIKKCNAQSRNSSRSLVCA*SDLRCI
Trigger: GATGCACCTCAAGTCGGACAAAGCGCAGACCAAGCT...TCTGCTGCTGTTCCTAGACTGAGCATTGCATTTCTTGATCAACCAGATGATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000611869.5
CDS-3UTR CAA 90 bp TTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCCAAAGGCAGCATCCTaGCTAATTTTCATCTACATT +
Preference number: 5 (lower is better)
Translates to: FLLALGESRLNSMQNAQFPKAAS*LIFIYI
Trigger: AATGTAGATGAAAATTAGCAAGGATGCTGCCTTTGG...GAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCTCCACAGCATCCCCCTaGAGTGATATGTTTCCATTT +
Preference number: 5 (lower is better)
Translates to: RISQVSTASPLSDMFPFLSTASP*SDMFPF
Trigger: AAATGGAAACATATCACTCAAGGGGGATGCTGTGGA...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000590436.5
ENST00000590684.5
ENST00000593064.5
ENST00000611869.5
ENST00000651991.1
CDS-3UTR CAA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCTCGCTTAGGCACAATTaGCTGGTGGCTTTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: RISQVSTASPLSDMFPFLSLRHN*LVALEE
Trigger: TTCTTCTAAAGCCACCAGCAAATTGTGCCTAAGCGA...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000590436.5
ENST00000590684.5
ENST00000593064.5
ENST00000611869.5
ENST00000651991.1
CDS-3UTR CAA 90 bp GCAATGCTCAGTCTAGGAACAGCAGCAGAAATAGCGAGAGACACGGGACTTTTACCAAAGGCAGCATCCTaGCTAATTTTCATCTACATT +
Preference number: 5 (lower is better)
Translates to: AMLSLGTAAEIARDTGLLPKAAS*LIFIYI
Trigger: AATGTAGATGAAAATTAGCAAGGATGCTGCCTTTGG...TAAAAGTCCCGTGTCTCTCGCTATTTCTGCTGCTGTTCCTAGACTGAGCATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp ATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCAGAGGCTATGGGGCCACTGCGTTTAATCATCTGGTaGATCAAGAAATGCAATGCT +
Preference number: 5 (lower is better)
Translates to: ISFEFYAERTVPEAMGPLRLIIW*IKKCNA
Trigger: AGCATTGCATTTCTTGATCAACCAGATGATTAAACG...CAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGAATTCAAACGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TTCCTCCTCGCGCTGGGTGAATCTCGTTTGAATTCTATGCAGAACGCACAGTTCCGTTTAATCATCTGGTaGATCAAGAAATGCAATGCT +
Preference number: 5 (lower is better)
Translates to: FLLALGESRLNSMQNAQFRLIIW*IKKCNA
Trigger: AGCATTGCATTTCTTGATCAACCAGATGATTAAACG...GAACTGTGCGTTCTGCATAGAATTCAAACGAGATTCACCCAGCGCGAGGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp CCAGGAGCAAAACAAGAGGGAGAGGCAAGTTCCCTTAAGAGATCAAACTCCCAGCGTTTAATCATCTGGTaGATCAAGAAATGCAATGCT +
Preference number: 5 (lower is better)
Translates to: PGAKQEGEASSLKRSNSQRLIIW*IKKCNA
Trigger: AGCATTGCATTTCTTGATCAACCAGATGATTAAACG...CTGGGAGTTTGATCTCTTAAGGGAACTTGCCTCTCCCTCTTGTTTTGCTCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp GCAATGCTCAGTCTAGGAACAGCAGCAGAAATAGCGAGAGACACGGGACTTTTACGTTTAATCATCTGGTaGATCAAGAAATGCAATGCT +
Preference number: 5 (lower is better)
Translates to: AMLSLGTAAEIARDTGLLRLIIW*IKKCNA
Trigger: AGCATTGCATTTCTTGATCAACCAGATGATTAAACG...TAAAAGTCCCGTGTCTCTCGCTATTTCTGCTGCTGTTCCTAGACTGAGCATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp TTAATCATCTGGTTGATCAAGAAATGCAATGCTCAGTCTAGGAACAGCAGCAGATCGCTTAGGCACAATTaGCTGGTGGCTTTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: LIIWLIKKCNAQSRNSSRSLRHN*LVALEE
Trigger: TTCTTCTAAAGCCACCAGCAAATTGTGCCTAAGCGA...TCTGCTGCTGTTCCTAGACTGAGCATTGCATTTCTTGATCAACCAGATGATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp AGAATAAGCCAGGTTTCCACAGCATCCCCCTTGAGTGATATGTTTCCATTTCTCCCAAAGGCAGCATCCTaGCTAATTTTCATCTACATT +
Preference number: 5 (lower is better)
Translates to: RISQVSTASPLSDMFPFLPKAAS*LIFIYI
Trigger: AATGTAGATGAAAATTAGCAAGGATGCTGCCTTTGG...GAGAAATGGAAACATATCACTCAAGGGGGATGCTGTGGAAACCTGGCTTATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000585731.5
ENST00000588136.7
ENST00000590684.5
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp AGGTTTACACGGGGTCTTTTTAATACAACGTTTAATCATCTGGTTGATCAAGAAGGCATTGAGCTGGCCTaGAGGTTTCCCTTGCATCTA +
Preference number: 5 (lower is better)
Translates to: RFTRGLFNTTFNHLVDQEGIELA*RFPLHL
Trigger: TAGATGCAAGGGAAACCTCAAGGCCAGCTCAATGCC...TTCTTGATCAACCAGATGATTAAACGTTGTATTAAAAAGACCCCGTGTAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS-3UTR CAA 90 bp AGGTTTACACGGGGTCTTTTTAATACAACGTTTAATCATCTGGTTGATCAAGAACTGGGTGAATCTCGTTaGAATTCTATGCAGAACGCA +
Preference number: 5 (lower is better)
Translates to: RFTRGLFNTTFNHLVDQELGESR*NSMQNA
Trigger: TGCGTTCTGCATAGAATTCAAACGAGATTCACCCAG...TTCTTGATCAACCAGATGATTAAACGTTGTATTAAAAAGACCCCGTGTAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262965.12
ENST00000344749.9
ENST00000588136.7
ENST00000593064.5
ENST00000611869.5
CDS CCA 72 bp GCCGTCCTCGGGGTGGCTGCCTCCAACCTGCAGGCGTaGGGAGACGGGTGCATCAGGGGGAGCCGGGTCCCC +
Preference number: 6 (lower is better)
Translates to: AVLGVAASNLQA*GDGCIRGSRVP
Trigger: GGGGACCCGGCTCCCCCTGATGCACCCGTCTCCCCACGCCTGCAGGTTGGAGGCAGCCACCCCGAGGACGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590436.5
CDS GCA 72 bp CGCTGTGCGTGCACTGACCATGCCAAGGCCCACGTCTaGACATCTGTGCACAGCAGAGGGACCGCACCAGGC +
Preference number: 6 (lower is better)
Translates to: RCACTDHAKAHV*TSVHSRGTAPG
Trigger: GCCTGGTGCGGTCCCTCTGCTGTGCACAGATGTGCAGACGTGGGCCTTGGCATGGTCAGTGCACGCACAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453954.6
CDS GCA 72 bp CCCTCCATGAGCGGGGAGAGCGTCTCAAGACCAGGGTaGTCCCGCGTGGTCCCAGGGGGCTCCATTCTAAGA +
Preference number: 6 (lower is better)
Translates to: PSMSGESVSRPG*SRVVPGGSILR
Trigger: TCTTAGAATGGAGCCCCCTGGGACCACGCGGGAGCACCCTGGTCTTGAGACGCTCTCCCCGCTCATGGAGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586318.1
CDS GCA 72 bp GGCGCAGGGAAGCTGGAATTCCAGAGTCTAGGTCCCTaGAGAGTCCTCCCCAGAGACCACAGGGAGTCTGAA +
Preference number: 6 (lower is better)
Translates to: GAGKLEFQSLGP*RVLPRDHRESE
Trigger: TTCAGACTCCCTGTGGTCTCTGGGGAGGACTCTGCAGGGACCTAGACTCTGGAATTCCAGCTTCCCTGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587235.6
CDS GCA 72 bp AGGGAACACCAGGGCATCAAGTTGCCAAGTTTAAACTaGACGCAGGGCAGCCAGAACCTCTCCTTTCTCCAA +
Preference number: 6 (lower is better)
Translates to: REHQGIKLPSLN*TQGSQNLSFLQ
Trigger: TTGGAGAAAGGAGAGGTTCTGGCTGCCCTGCGTGCAGTTTAAACTTGGCAACTTGATGCCCTGGTGTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587235.6
CDS CAA 90 bp AAATATAAACTCCCTAACTCCCCCAGGGAACACCAGGGCATCAAGTaGCCAAGTTTAAACTGCACGCAGGGCAGCCAGAACCTCTCCTTT +
Preference number: 6 (lower is better)
Translates to: KYKLPNSPREHQGIK*PSLNCTQGSQNLSF
Trigger: AAAGGAGAGGTTCTGGCTGCCCTGCGTGCAGTTTAAACTTGGCAACTTGATGCCCTGGTGTTCCCTGGGGGAGTTAGGGAGTTTATATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587235.6