Pregenerated sensors for TCF24 (Homo sapiens)
Ensembl gene IDs: ENSG00000261787Ensembl transcript IDs: ENST00000563496.2, ENST00000566129.1
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGGTGTGGTGACATGCACCTACATTGTGAACTCTGCTGTCCGCTaGCACCTGGTCTCCTGTTCACACTGGACTGCAGGGATTCCCAGT | + |
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Preference number: 1 (lower is better) Translates to: PGVVTCTYIVNSAVR*HLVSCSHWTAGIPS Trigger: ACTGGGAATCCCTGCAGTCCAGTGTGAACAGGAGACCAGGTGTCAGCGGACAGCAGAGTTCACAATGTAGGTGCATGTCACCACACCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| 3UTR GCA 90 bp | GAACTCTGCTGTCCGCTGACACCTGGTCTCCTGTTCACACTGGACTaGAGGGATTCCCAGTGCCTTCCACAAGTTGCAAACACTGTAAGA | + |
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Preference number: 1 (lower is better) Translates to: ELCCPLTPGLLFTLD*RDSQCLPQVANTVR Trigger: TCTTACAGTGTTTGCAACTTGTGGAAGGCACTGGGAATCCCTGCAGTCCAGTGTGAACAGGAGACCAGGTGTCAGCGGACAGCAGAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| 3UTR GCA 90 bp | CTGACACCTGGTCTCCTGTTCACACTGGACTGCAGGGATTCCCAGTaGCTTCCACAAGTTGCAAACACTGTAAGATACAGAATAACCCTC | + |
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Preference number: 1 (lower is better) Translates to: LTPGLLFTLDCRDSQ*LPQVANTVRYRITL Trigger: GAGGGTTATTCTGTATCTTACAGTGTTTGCAACTTGTGGAAGGCACTGGGAATCCCTGCAGTCCAGTGTGAACAGGAGACCAGGTGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR TCA 90 bp | CCCTGTCCTCTGAGCAAACCATTTCTAATACTCCAAACAAGTTTTCTAAGAGGGAGCTCCGCTCCGTCGTaGGGGCGGGCGAGGGGCGTG | + |
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Preference number: 4 (lower is better) Translates to: PCPLSKPFLILQTSFLRGSSAPS*GRARGV Trigger: CACGCCCCTCGCCCGCCCTCACGACGGAGCGGAGCT...CCCTCTTAGAAAACTTGTTTGGAGTATTAGAAATGGTTTGCTCAGAGGACAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR CCA 90 bp | CCCTGTCCTCTGAGCAAACCATTTCTAATACTCCAAACAAGTTTTCTAAGAGGGGTCGGGCGGAGGACCTaGCCCACCGGAGAGGCTACG | + |
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Preference number: 4 (lower is better) Translates to: PCPLSKPFLILQTSFLRGVGRRT*PTGEAT Trigger: CGTAGCCTCTCCGGTGGGCCAGGTCCTCCGCCCGAC...CCCTCTTAGAAAACTTGTTTGGAGTATTAGAAATGGTTTGCTCAGAGGACAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR TCA 90 bp | CCCTGTCCTCTGAGCAAACCATTTCTAATACTCCAAACAAGTTTTCTAAGAGGGCTTTCCTGGAGCGGCTaGGTGGAGCTCCGCTCCGTC | + |
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Preference number: 4 (lower is better) Translates to: PCPLSKPFLILQTSFLRGLSWSG*VELRSV Trigger: GACGGAGCGGAGCTCCACTCAGCCGCTCCAGGAAAG...CCCTCTTAGAAAACTTGTTTGGAGTATTAGAAATGGTTTGCTCAGAGGACAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR TCA 90 bp | CCCTGTCCTCTGAGCAAACCATTTCTAATACTCCAAACAAGTTTTCTAAGAGGGAACCTCCGCTGGCTGTaGCTTTTATGCGGGCGCCCC | + |
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Preference number: 4 (lower is better) Translates to: PCPLSKPFLILQTSFLRGNLRWL*LLCGRP Trigger: GGGGCGCCCGCATAAAAGTCACAGCCAGCGGAGGTT...CCCTCTTAGAAAACTTGTTTGGAGTATTAGAAATGGTTTGCTCAGAGGACAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR GCA 90 bp | AGTAGTGACTCTCACACTGAACAGATAAGCTGTGTGTTTTATATAACACTGATTGGGTCTGCACCCGGCTaGGCTCCCGCGCCGCATTCG | + |
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Preference number: 4 (lower is better) Translates to: SSDSHTEQISCVFYITLIGSAPG*APAPHS Trigger: CGAATGCGGCGCGGGAGCGCAGCCGGGTGCAGACCC...AATCAGTGTTATATAAAACACACAGCTTATCTGTTCAGTGTGAGAGTCACTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR CCA 90 bp | CTGTCCTCTGAGCAAACCATTTCTAATACTCCAAACAAGTTTTCTAAGAGGGAATGGCCAGGGCCGCGCTaGTCACTCCATCCTCGTCCG | + |
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Preference number: 4 (lower is better) Translates to: LSSEQTISNTPNKFSKREWPGPR*SLHPRP Trigger: CGGACGAGGATGGAGTGACCAGCGCGGCCCTGGCCA...TTCCCTCTTAGAAAACTTGTTTGGAGTATTAGAAATGGTTTGCTCAGAGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR GCA 90 bp | CTGTCCTCTGAGCAAACCATTTCTAATACTCCAAACAAGTTTTCTAAGAGGGAAGACGGCAGCGTGCGCTaGAGCTCCAGGAAAGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: LSSEQTISNTPNKFSKREDGSVR*SSRKAC Trigger: GCACGCTTTCCTGGAGCTGCAGCGCACGCTGCCGTC...TTCCCTCTTAGAAAACTTGTTTGGAGTATTAGAAATGGTTTGCTCAGAGGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR GCA 90 bp | CTGTCCTCTGAGCAAACCATTTCTAATACTCCAAACAAGTTTTCTAAGAGGGAAGCACGGACGGCAGCGTaGGCTGCAGCTCCAGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: LSSEQTISNTPNKFSKREARTAA*AAAPGK Trigger: CTTTCCTGGAGCTGCAGCGCACGCTGCCGTCCGTGC...TTCCCTCTTAGAAAACTTGTTTGGAGTATTAGAAATGGTTTGCTCAGAGGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR CCA 90 bp | AGTAGTGACTCTCACACTGAACAGATAAGCTGTGTGTTTTATATAACACTGATTGGAGCAGGGCCTGTGTaGCCAGGGCCGCGCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: SSDSHTEQISCVFYITLIGAGPV*PGPRWS Trigger: TGACCAGCGCGGCCCTGGCCACACAGGCCCTGCTCC...AATCAGTGTTATATAAAACACACAGCTTATCTGTTCAGTGTGAGAGTCACTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR CCA 90 bp | CCCTGTCCTCTGAGCAAACCATTTCTAATACTCCAAACAAGTTTTCTAAGAGGGGATGCGCGATGTAGGTaGTGGCCAGCAGCAGCACGT | + |
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Preference number: 4 (lower is better) Translates to: PCPLSKPFLILQTSFLRGDARCR*WPAAAR Trigger: ACGTGCTGCTGCTGGCCACCACCTACATCGCGCATC...CCCTCTTAGAAAACTTGTTTGGAGTATTAGAAATGGTTTGCTCAGAGGACAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR GCA 90 bp | AGTAGTGACTCTCACACTGAACAGATAAGCTGTGTGTTTTATATAACACTGATTGCGGCCAGGCGTGTGTaGTCCGACCGGCTAAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SSDSHTEQISCVFYITLIAARRV*SDRLRQ Trigger: CTGCCTTAGCCGGTCGGAGCACACACGCCTGGCCGC...AATCAGTGTTATATAAAACACACAGCTTATCTGTTCAGTGTGAGAGTCACTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR GCA 90 bp | CTGTCCTCTGAGCAAACCATTTCTAATACTCCAAACAAGTTTTCTAAGAGGGAAGCCTGGGACGCGATTTaGTTCCGGACGTCTGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LSSEQTISNTPNKFSKREAWDAI*FRTSGE Trigger: CTCCCCAGACGTCCGGAAGCAAATCGCGTCCCAGGC...TTCCCTCTTAGAAAACTTGTTTGGAGTATTAGAAATGGTTTGCTCAGAGGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR GCA 90 bp | AGTAGTGACTCTCACACTGAACAGATAAGCTGTGTGTTTTATATAACACTGATTGCCTCGGCGTCGTCCTaGAGGCTGCGGGTGAGATGC | + |
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Preference number: 4 (lower is better) Translates to: SSDSHTEQISCVFYITLIASASS*RLRVRC Trigger: GCATCTCACCCGCAGCCTGCAGGACGACGCCGAGGC...AATCAGTGTTATATAAAACACACAGCTTATCTGTTCAGTGTGAGAGTCACTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR CCA 90 bp | CCCTGTCCTCTGAGCAAACCATTTCTAATACTCCAAACAAGTTTTCTAAGAGGGCGAGCTCGTTTTGCCTaGGACGCGATTTGCTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: PCPLSKPFLILQTSFLRGRARFA*DAICFR Trigger: CCGGAAGCAAATCGCGTCCCAGGCAAAACGAGCTCG...CCCTCTTAGAAAACTTGTTTGGAGTATTAGAAATGGTTTGCTCAGAGGACAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR TCA 90 bp | AGTAGTGACTCTCACACTGAACAGATAAGCTGTGTGTTTTATATAACACTGATTCCTGCAGGCTGCGGGTaGGATGCGCGATGTAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SSDSHTEQISCVFYITLIPAGCG*DARCRW Trigger: CCACCTACATCGCGCATCTCACCCGCAGCCTGCAGG...AATCAGTGTTATATAAAACACACAGCTTATCTGTTCAGTGTGAGAGTCACTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR GCA 90 bp | CTGTCCTCTGAGCAAACCATTTCTAATACTCCAAACAAGTTTTCTAAGAGGGAATCCTCGTCCGGCCGATaGCCAAGTCGACGGCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: LSSEQTISNTPNKFSKRESSSGR*PSRRLF Trigger: AAACAGCCGTCGACTTGGGCATCGGCCGGACGAGGA...TTCCCTCTTAGAAAACTTGTTTGGAGTATTAGAAATGGTTTGCTCAGAGGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR GCA 90 bp | AGTAGTGACTCTCACACTGAACAGATAAGCTGTGTGTTTTATATAACACTGATTAGCTCCAGGAAAGCGTaGCGCAGGGTCTGCACCCGG | + |
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Preference number: 4 (lower is better) Translates to: SSDSHTEQISCVFYITLISSRKA*RRVCTR Trigger: CCGGGTGCAGACCCTGCGGCACGCTTTCCTGGAGCT...AATCAGTGTTATATAAAACACACAGCTTATCTGTTCAGTGTGAGAGTCACTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR CCA 90 bp | CCCTGTCCTCTGAGCAAACCATTTCTAATACTCCAAACAAGTTTTCTAAGAGGGGAACTCCGGAGTTCTTaGGCTTCCTTTCCTGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: PCPLSKPFLILQTSFLRGELRSS*ASFPGA Trigger: CGCTCCAGGAAAGGAAGCCCAAGAACTCCGGAGTTC...CCCTCTTAGAAAACTTGTTTGGAGTATTAGAAATGGTTTGCTCAGAGGACAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR TCA 90 bp | CCCTGTCCTCTGAGCAAACCATTTCTAATACTCCAAACAAGTTTTCTAAGAGGGGAGAGCCTAAGGCTGTaGGTCTGTTGGAGTGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: PCPLSKPFLILQTSFLRGESLRL*VCWSVV Trigger: GACAACACTCCAACAGACTCACAGCCTTAGGCTCTC...CCCTCTTAGAAAACTTGTTTGGAGTATTAGAAATGGTTTGCTCAGAGGACAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR GCA 90 bp | CCCTGTCCTCTGAGCAAACCATTTCTAATACTCCAAACAAGTTTTCTAAGAGGGCTGTTCACACTGGACTaGAGGGATTCCCAGTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: PCPLSKPFLILQTSFLRGLFTLD*RDSQCL Trigger: AAGGCACTGGGAATCCCTGCAGTCCAGTGTGAACAG...CCCTCTTAGAAAACTTGTTTGGAGTATTAGAAATGGTTTGCTCAGAGGACAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR TCA 90 bp | CTGTCCTCTGAGCAAACCATTTCTAATACTCCAAACAAGTTTTCTAAGAGGGAAAACTCTGCTGTCCGCTaGCACCTGGTCTCCTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: LSSEQTISNTPNKFSKRENSAVR*HLVSCS Trigger: TGAACAGGAGACCAGGTGTCAGCGGACAGCAGAGTT...TTCCCTCTTAGAAAACTTGTTTGGAGTATTAGAAATGGTTTGCTCAGAGGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR TCA 90 bp | CTGTCCTCTGAGCAAACCATTTCTAATACTCCAAACAAGTTTTCTAAGAGGGAACATGCACCTACATTGTaGACTCTGCTGTCCGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: LSSEQTISNTPNKFSKREHAPTL*TLLSAD Trigger: GTCAGCGGACAGCAGAGTTCACAATGTAGGTGCATG...TTCCCTCTTAGAAAACTTGTTTGGAGTATTAGAAATGGTTTGCTCAGAGGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR GCA 90 bp | CTGTCCTCTGAGCAAACCATTTCTAATACTCCAAACAAGTTTTCTAAGAGGGAACAAGCGAGCTCGTTTTaGCTGGGACGCGATTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: LSSEQTISNTPNKFSKREQASSF*LGRDLL Trigger: AAGCAAATCGCGTCCCAGGCAAAACGAGCTCGCTTG...TTCCCTCTTAGAAAACTTGTTTGGAGTATTAGAAATGGTTTGCTCAGAGGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR CCA 90 bp | AGTAGTGACTCTCACACTGAACAGATAAGCTGTGTGTTTTATATAACACTGATTTTGCTTCCGGACGTCTaGGGAGAGTTGCGGAACTCC | + |
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Preference number: 4 (lower is better) Translates to: SSDSHTEQISCVFYITLILLPDV*GELRNS Trigger: GGAGTTCCGCAACTCTCCCCAGACGTCCGGAAGCAA...AATCAGTGTTATATAAAACACACAGCTTATCTGTTCAGTGTGAGAGTCACTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR TCA 90 bp | CCCTGTCCTCTGAGCAAACCATTTCTAATACTCCAAACAAGTTTTCTAAGAGGGACCGATGTACAATCTTaGTCGCATGGGCCATTTCTT | + |
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Preference number: 4 (lower is better) Translates to: PCPLSKPFLILQTSFLRGTDVQS*SHGPFL Trigger: AAGAAATGGCCCATGCGATCAAGATTGTACATCGGT...CCCTCTTAGAAAACTTGTTTGGAGTATTAGAAATGGTTTGCTCAGAGGACAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR GCA 90 bp | AGTAGTGACTCTCACACTGAACAGATAAGCTGTGTGTTTTATATAACACTGATTACGTCTGGGGAGAGTTaGGGAACTCCGGAGTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: SSDSHTEQISCVFYITLITSGES*GTPEFL Trigger: CAAGAACTCCGGAGTTCCGCAACTCTCCCCAGACGT...AATCAGTGTTATATAAAACACACAGCTTATCTGTTCAGTGTGAGAGTCACTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR GCA 90 bp | CTGTCCTCTGAGCAAACCATTTCTAATACTCCAAACAAGTTTTCTAAGAGGGAACCAGGTGTGGTGACATaGACCTACATTGTGAACTCT | + |
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Preference number: 4 (lower is better) Translates to: LSSEQTISNTPNKFSKREPGVVT*TYIVNS Trigger: AGAGTTCACAATGTAGGTGCATGTCACCACACCTGG...TTCCCTCTTAGAAAACTTGTTTGGAGTATTAGAAATGGTTTGCTCAGAGGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR GCA 90 bp | AGTAGTGACTCTCACACTGAACAGATAAGCTGTGTGTTTTATATAACACTGATTTGCAGGGATTCCCAGTaGCTTCCACAAGTTGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: SSDSHTEQISCVFYITLICRDSQ*LPQVAN Trigger: GTTTGCAACTTGTGGAAGGCACTGGGAATCCCTGCA...AATCAGTGTTATATAAAACACACAGCTTATCTGTTCAGTGTGAGAGTCACTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR GCA 90 bp | AGTAGTGACTCTCACACTGAACAGATAAGCTGTGTGTTTTATATAACACTGATTCTACATTGTGAACTCTaGTGTCCGCTGACACCTGGT | + |
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Preference number: 4 (lower is better) Translates to: SSDSHTEQISCVFYITLILHCEL*CPLTPG Trigger: ACCAGGTGTCAGCGGACAGCAGAGTTCACAATGTAG...AATCAGTGTTATATAAAACACACAGCTTATCTGTTCAGTGTGAGAGTCACTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR TCA 90 bp | AGTAGTGACTCTCACACTGAACAGATAAGCTGTGTGTTTTATATAACACTGATTGAATGCTTCAGAAACTaGCCAGTAGCACCGATGTAC | + |
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Preference number: 4 (lower is better) Translates to: SSDSHTEQISCVFYITLIECFRN*PVAPMY Trigger: GTACATCGGTGCTACTGGTCAGTTTCTGAAGCATTC...AATCAGTGTTATATAAAACACACAGCTTATCTGTTCAGTGTGAGAGTCACTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR GCA 90 bp | AGTAGTGACTCTCACACTGAACAGATAAGCTGTGTGTTTTATATAACACTGATTGTGCCTTCCACAAGTTaGAAACACTGTAAGATACAG | + |
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Preference number: 4 (lower is better) Translates to: SSDSHTEQISCVFYITLIVPSTS*KHCKIQ Trigger: CTGTATCTTACAGTGTTTGCAACTTGTGGAAGGCAC...AATCAGTGTTATATAAAACACACAGCTTATCTGTTCAGTGTGAGAGTCACTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| 3UTR CAA 72 bp | CCATTCACCATTAAAGCATTAAAAGAGCATGCTCTTTaGAATCTGAGTGAAAATATGCAATTTCTCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: PFTIKALKEHAL*NLSENMQFLLC Trigger: ACAGAGGAGAAATTGCATATTTTCACTCAGATTCAAAAGAGCATGCTCTTTTAATGCTTTAATGGTGAATGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS CCA 90 bp | CGCTCCGTCGTGAGGGCGGGCGAGGGGCGTGGAGCAGGGCCTGTGTaGCCAGGGCCGCGCTGGTCACTCCATCCTCGTCCGGCCGATGCC | + |
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Preference number: 5 (lower is better) Translates to: RSVVRAGEGRGAGPV*PGPRWSLHPRPADA Trigger: GGCATCGGCCGGACGAGGATGGAGTGACCAGCGCGGCCCTGGCCACACAGGCCCTGCTCCACGCCCCTCGCCCGCCCTCACGACGGAGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS CCA 90 bp | CGGCTGAGTGGAGCTCCGCTCCGTCGTGAGGGCGGGCGAGGGGCGTaGAGCAGGGCCTGTGTGGCCAGGGCCGCGCTGGTCACTCCATCC | + |
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Preference number: 5 (lower is better) Translates to: RLSGAPLRREGGRGA*SRACVARAALVTPS Trigger: GGATGGAGTGACCAGCGCGGCCCTGGCCACACAGGCCCTGCTCCACGCCCCTCGCCCGCCCTCACGACGGAGCGGAGCTCCACTCAGCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS TCA 90 bp | TGGGCTTCCTTTCCTGGAGCGGCTGAGTGGAGCTCCGCTCCGTCGTaGGGGCGGGCGAGGGGCGTGGAGCAGGGCCTGTGTGGCCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: WASFPGAAEWSSAPS*GRARGVEQGLCGQG Trigger: GCCCTGGCCACACAGGCCCTGCTCCACGCCCCTCGCCCGCCCTCACGACGGAGCGGAGCTCCACTCAGCCGCTCCAGGAAAGGAAGCCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS TCA 90 bp | CGGCCGATGCCCAAGTCGACGGCTGTTTCCAACCTCCGCTGGCTGTaGCTTTTATGCGGGCGCCCCGCGGCCAGGCGTGTGTGCTCCGAC | + |
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Preference number: 5 (lower is better) Translates to: RPMPKSTAVSNLRWL*LLCGRPAARRVCSD Trigger: GTCGGAGCACACACGCCTGGCCGCGGGGCGCCCGCATAAAAGTCACAGCCAGCGGAGGTTGGAAACAGCCGTCGACTTGGGCATCGGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS GCA 90 bp | TGTGTGGCCAGGGCCGCGCTGGTCACTCCATCCTCGTCCGGCCGATaGCCAAGTCGACGGCTGTTTCCAACCTCCGCTGGCTGTGACTTT | + |
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Preference number: 5 (lower is better) Translates to: CVARAALVTPSSSGR*PSRRLFPTSAGCDF Trigger: AAAGTCACAGCCAGCGGAGGTTGGAAACAGCCGTCGACTTGGGCATCGGCCGGACGAGGATGGAGTGACCAGCGCGGCCCTGGCCACACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS GCA 90 bp | GCTAAGGGCGCTCTCAAGCGAGCTCGTTTTGCCTGGGACGCGATTTaGTTCCGGACGTCTGGGGAGAGTTGCGGAACTCCGGAGTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: AKGALKRARFAWDAI*FRTSGESCGTPEFL Trigger: CAAGAACTCCGGAGTTCCGCAACTCTCCCCAGACGTCCGGAAGCAAATCGCGTCCCAGGCAAAACGAGCTCGCTTGAGAGCGCCCTTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS CCA 90 bp | CAAGCGAGCTCGTTTTGCCTGGGACGCGATTTGCTTCCGGACGTCTaGGGAGAGTTGCGGAACTCCGGAGTTCTTGGGCTTCCTTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: QASSFCLGRDLLPDV*GELRNSGVLGLPFL Trigger: CAGGAAAGGAAGCCCAAGAACTCCGGAGTTCCGCAACTCTCCCCAGACGTCCGGAAGCAAATCGCGTCCCAGGCAAAACGAGCTCGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS TCA 90 bp | GCATGGGCCATTTCTGCGCCCACTGTCTGGCACTGCCTAGTGAGATaGACCCGGTACCTCAGATGGGAATGCAGAAATCACCCGTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: AWAISAPTVWHCLVR*TRYLRWECRNHPSS Trigger: AGAAGACGGGTGATTTCTGCATTCCCATCTGAGGTACCGGGTTCATCTCACTAGGCAGTGCCAGACAGTGGGCGCAGAAATGGCCCATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566129.1 |
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| CDS GCA 90 bp | ATGAACCCGGTACCTCAGATGGGAATGCAGAAATCACCCGTCTTCTaGGTCGCTCACGCTGGGAGCTGTATACCGGAGCTGTTCCTATTC | + |
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Preference number: 5 (lower is better) Translates to: MNPVPQMGMQKSPVF*VAHAGSCIPELFLF Trigger: GAATAGGAACAGCTCCGGTATACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTCCCATCTGAGGTACCGGGTTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566129.1 |
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| CDS-3UTR CAA 90 bp | CTGTCCTCTGAGCAAACCATTTCTAATACTCCAAACAAGTTTTCTAAGAGGGAAGACGTCTGGGGAGAGTaGCGGAACTCCGGAGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: LSSEQTISNTPNKFSKREDVWGE*RNSGVL Trigger: AAGAACTCCGGAGTTCCGCAACTCTCCCCAGACGTC...TTCCCTCTTAGAAAACTTGTTTGGAGTATTAGAAATGGTTTGCTCAGAGGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR CAA 90 bp | AGTAGTGACTCTCACACTGAACAGATAAGCTGTGTGTTTTATATAACACTGATTTGCCTGGGACGCGATTaGCTTCCGGACGTCTGGGGA | + |
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Preference number: 5 (lower is better) Translates to: SSDSHTEQISCVFYITLICLGRD*LPDVWG Trigger: TCCCCAGACGTCCGGAAGCAAATCGCGTCCCAGGCA...AATCAGTGTTATATAAAACACACAGCTTATCTGTTCAGTGTGAGAGTCACTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR CAA 90 bp | CTGTCCTCTGAGCAAACCATTTCTAATACTCCAAACAAGTTTTCTAAGAGGGAATCAAGCGAGCTCGTTTaGCCTGGGACGCGATTTGCT | + |
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Preference number: 5 (lower is better) Translates to: LSSEQTISNTPNKFSKRESSELV*PGTRFA Trigger: AGCAAATCGCGTCCCAGGCAAAACGAGCTCGCTTGA...TTCCCTCTTAGAAAACTTGTTTGGAGTATTAGAAATGGTTTGCTCAGAGGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR CAA 90 bp | CCCTGTCCTCTGAGCAAACCATTTCTAATACTCCAAACAAGTTTTCTAAGAGGGAAGGCTGTGAGTCTGTaGGAGTGTTGTCATGATTTG | + |
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Preference number: 5 (lower is better) Translates to: PCPLSKPFLILQTSFLRGKAVSL*ECCHDL Trigger: CAAATCATGACAACACTCCAACAGACTCACAGCCTT...CCCTCTTAGAAAACTTGTTTGGAGTATTAGAAATGGTTTGCTCAGAGGACAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR CAA 90 bp | CTGTCCTCTGAGCAAACCATTTCTAATACTCCAAACAAGTTTTCTAAGAGGGAACACCGATGTACAATCTaGATCGCATGGGCCATTTCT | + |
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Preference number: 5 (lower is better) Translates to: LSSEQTISNTPNKFSKREHRCTI*IAWAIS Trigger: AGAAATGGCCCATGCGATCAAGATTGTACATCGGTG...TTCCCTCTTAGAAAACTTGTTTGGAGTATTAGAAATGGTTTGCTCAGAGGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS-3UTR CAA 90 bp | CTGTCCTCTGAGCAAACCATTTCTAATACTCCAAACAAGTTTTCTAAGAGGGAAAGGCAGGAGGATTTATaGAGCCAGGATTTCAAGAGT | + |
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Preference number: 5 (lower is better) Translates to: LSSEQTISNTPNKFSKRERQEDL*SQDFKS Trigger: ACTCTTGAAATCCTGGCTCAATAAATCCTCCTGCCT...TTCCCTCTTAGAAAACTTGTTTGGAGTATTAGAAATGGTTTGCTCAGAGGACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS GCA 72 bp | AGGGCCGCGCTGGTCACTCCATCCTCGTCCGGCCGATaGCCAAGTCGACGGCTGTTTCCAACCTCCGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: RAALVTPSSSGR*PSRRLFPTSAG Trigger: GCCAGCGGAGGTTGGAAACAGCCGTCGACTTGGGCATCGGCCGGACGAGGATGGAGTGACCAGCGCGGCCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS TCA 72 bp | CCCAAGTCGACGGCTGTTTCCAACCTCCGCTGGCTGTaGCTTTTATGCGGGCGCCCCGCGGCCAGGCGTGTG | + |
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Preference number: 6 (lower is better) Translates to: PKSTAVSNLRWL*LLCGRPAARRV Trigger: CACACGCCTGGCCGCGGGGCGCCCGCATAAAAGTCACAGCCAGCGGAGGTTGGAAACAGCCGTCGACTTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS CAA 90 bp | CGCAGCAGCCCAACGGGGCTAAGGGCGCTCTCAAGCGAGCTCGTTTaGCCTGGGACGCGATTTGCTTCCGGACGTCTGGGGAGAGTTGCG | + |
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Preference number: 6 (lower is better) Translates to: RSSPTGLRALSSELV*PGTRFASGRLGRVA Trigger: CGCAACTCTCCCCAGACGTCCGGAAGCAAATCGCGTCCCAGGCAAAACGAGCTCGCTTGAGAGCGCCCTTAGCCCCGTTGGGCTGCTGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS CAA 72 bp | CCAACGGGGCTAAGGGCGCTCTCAAGCGAGCTCGTTTaGCCTGGGACGCGATTTGCTTCCGGACGTCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: PTGLRALSSELV*PGTRFASGRLG Trigger: CCCCAGACGTCCGGAAGCAAATCGCGTCCCAGGCAAAACGAGCTCGCTTGAGAGCGCCCTTAGCCCCGTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS GCA 72 bp | GCTCTCAAGCGAGCTCGTTTTGCCTGGGACGCGATTTaGTTCCGGACGTCTGGGGAGAGTTGCGGAACTCCG | + |
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Preference number: 6 (lower is better) Translates to: ALKRARFAWDAI*FRTSGESCGTP Trigger: CGGAGTTCCGCAACTCTCCCCAGACGTCCGGAAGCAAATCGCGTCCCAGGCAAAACGAGCTCGCTTGAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS CAA 72 bp | CGCTCTCAAGCGAGCTCGTTTTGCCTGGGACGCGATTaGCTTCCGGACGTCTGGGGAGAGTTGCGGAACTCC | + |
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Preference number: 6 (lower is better) Translates to: RSQASSFCLGRD*LPDVWGELRNS Trigger: GGAGTTCCGCAACTCTCCCCAGACGTCCGGAAGCAAATCGCGTCCCAGGCAAAACGAGCTCGCTTGAGAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS GCA 72 bp | TGGGACGCGATTTGCTTCCGGACGTCTGGGGAGAGTTaGGGAACTCCGGAGTTCTTGGGCTTCCTTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: WDAICFRTSGES*GTPEFLGFLSW Trigger: CCAGGAAAGGAAGCCCAAGAACTCCGGAGTTCCGCAACTCTCCCCAGACGTCCGGAAGCAAATCGCGTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS CAA 72 bp | CTGGGACGCGATTTGCTTCCGGACGTCTGGGGAGAGTaGCGGAACTCCGGAGTTCTTGGGCTTCCTTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: LGRDLLPDVWGE*RNSGVLGLPFL Trigger: CAGGAAAGGAAGCCCAAGAACTCCGGAGTTCCGCAACTCTCCCCAGACGTCCGGAAGCAAATCGCGTCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS CCA 72 bp | TCGTTTTGCCTGGGACGCGATTTGCTTCCGGACGTCTaGGGAGAGTTGCGGAACTCCGGAGTTCTTGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: SFCLGRDLLPDV*GELRNSGVLGL Trigger: AAGCCCAAGAACTCCGGAGTTCCGCAACTCTCCCCAGACGTCCGGAAGCAAATCGCGTCCCAGGCAAAACGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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| CDS GCA 72 bp | GTACCTCAGATGGGAATGCAGAAATCACCCGTCTTCTaGGTCGCTCACGCTGGGAGCTGTATACCGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: VPQMGMQKSPVF*VAHAGSCIPEL Trigger: CAGCTCCGGTATACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTCCCATCTGAGGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566129.1 |
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| CDS CCA 72 bp | AATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTaGGAGCTGTATACCGGAGCTGTTCCTATTCGGCCA | + |
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Preference number: 6 (lower is better) Translates to: NAEITRLLRRSR*ELYTGAVPIRP Trigger: TGGCCGAATAGGAACAGCTCCGGTATACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566129.1 |
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| CDS GCA 72 bp | GCACCGATGTACAATCTTGATCGCATGGGCCATTTCTaGGCCCACTGTCTGGCACTGCCTAGTGAGATGAAC | + |
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Preference number: 6 (lower is better) Translates to: APMYNLDRMGHF*AHCLALPSEMN Trigger: GTTCATCTCACTAGGCAGTGCCAGACAGTGGGCGCAGAAATGGCCCATGCGATCAAGATTGTACATCGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566129.1 |
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| CDS TCA 72 bp | CTTCAGAAACTGACCAGTAGCACCGATGTACAATCTTaGTCGCATGGGCCATTTCTGCGCCCACTGTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: LQKLTSSTDVQS*SHGPFLRPLSG Trigger: GCCAGACAGTGGGCGCAGAAATGGCCCATGCGATCAAGATTGTACATCGGTGCTACTGGTCAGTTTCTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566129.1 |
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| CDS TCA 72 bp | CTTCAGAAACTGACCAGTAGCACCGATGTACAATCTTaGTCGCATGGGCCATTTCTTGACCGGGTGCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: LQKLTSSTDVQS*SHGPFLDRVQV Trigger: TACCTGCACCCGGTCAAGAAATGGCCCATGCGATCAAGATTGTACATCGGTGCTACTGGTCAGTTTCTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563496.2 |
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