RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TCF12 (Homo sapiens)

Ensembl gene IDs: ENSG00000140262

Ensembl transcript IDs: ENST00000267811.9, ENST00000333725.10, ENST00000343827.7, ENST00000438423.6, ENST00000537840.5, ENST00000543579.5, ENST00000557843.5, ENST00000557947.5, ENST00000558210.5, ENST00000558908.5, ENST00000559609.5, ENST00000559703.1, ENST00000559710.5, ENST00000560190.5, ENST00000560191.1, ENST00000560506.5, ENST00000560764.5, ENST00000560836.1, ENST00000560948.1, ENST00000561152.1, ENST00000561235.5, ENST00000561346.5, ENST00000561420.5, ENST00000561449.1, ENST00000561454.1, ENST00000569880.1

Found 1070 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCACAAGGCAACTTCCACGGTGAGTGGAGAGATCGAGACAGTCTCTaGTTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTG +
Preference number: 1 (lower is better)
Translates to: AQGNFHGEWRDRDSL*LCRSDTLLATKDLL
Trigger: CAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGTGGAAGTTGCCTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
3UTR TCA 90 bp CAATGCATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGGTaGGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACAC +
Preference number: 1 (lower is better)
Translates to: QCICQFSLGTRQLPR*VERSRQSLIVQKRH
Trigger: GTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATGCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
3UTR GCA 90 bp CACCAAGAGAAGCAATCTGCCAGCATACCAAGAGGATGTGACAATTaGCATGGGTTTCGCACGCACAGGTCCTACAAAAAGTCATTCACT +
Preference number: 1 (lower is better)
Translates to: HQEKQSASIPRGCDN*HGFRTHRSYKKSFT
Trigger: AGTGAATGACTTTTTGTAGGACCTGTGCGTGCGAAACCCATGGCAATTGTCACATCCTCTTGGTATGCTGGCAGATTGCTTCTCTTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
3UTR TCA 90 bp CATAATTCACCAAGAGAAGCAATCTGCCAGCATACCAAGAGGATGTaGCAATTGCCATGGGTTTCGCACGCACAGGTCCTACAAAAAGTC +
Preference number: 1 (lower is better)
Translates to: HNSPREAICQHTKRM*QLPWVSHAQVLQKV
Trigger: GACTTTTTGTAGGACCTGTGCGTGCGAAACCCATGGCAATTGTCACATCCTCTTGGTATGCTGGCAGATTGCTTCTCTTGGTGAATTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
3UTR TCA 90 bp TCTAGACCAGATTGCCAACTTAGCTCCACAAGCCTGATTCTGTCCTaGAGGGTTTCCCAGATAATGTCGGTAATGCAGTTAGGAAAAGCA +
Preference number: 1 (lower is better)
Translates to: SRPDCQLSSTSLILS*RVSQIMSVMQLGKA
Trigger: TGCTTTTCCTAACTGCATTACCGACATTATCTGGGAAACCCTTCAGGACAGAATCAGGCTTGTGGAGCTAAGTTGGCAATCTGGTCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
3UTR GCA 90 bp TGGTTGTCACTGCTTTGTTCTCTGCACGTGAACCGCTTTAATGTATaGTGGCATCAGCTGAGTGTAGATCAGCTTTCCACATTAACTTTT +
Preference number: 1 (lower is better)
Translates to: WLSLLCSLHVNRFNV*WHQLSVDQLSTLTF
Trigger: AAAAGTTAATGTGGAAAGCTGATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAGCAGTGACAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
3UTR CCA 90 bp TTGTCACTGCTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTaGCATCAGCTGAGTGTAGATCAGCTTTCCACATTAACTTTTTCC +
Preference number: 1 (lower is better)
Translates to: LSLLCSLHVNRFNVC*HQLSVDQLSTLTFS
Trigger: GGAAAAAGTTAATGTGGAAAGCTGATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAGCAGTGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
3UTR TCA 90 bp GGAGGAATGGGATTCATTCTTCCAGACAATACGTGTAAGTTTACTTaGCTGTGGAATGCCAAGGGAGAAGGAACTGCAATTTTTAGAAGA +
Preference number: 1 (lower is better)
Translates to: GGMGFILPDNTCKFT*LWNAKGEGTAIFRR
Trigger: TCTTCTAAAAATTGCAGTTCCTTCTCCCTTGGCATTCCACAGTCAAGTAAACTTACACGTATTGTCTGGAAGAATGAATCCCATTCCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560948.1
3UTR CCA 90 bp AAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAAACATCTCATaGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGAT +
Preference number: 1 (lower is better)
Translates to: KRHTACNKRFVANIS*ADVLSDELPIFTSD
Trigger: ATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
3UTR GCA 90 bp CTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTaGTTTGATCGTAGGATTACATTTGAGTTTCTTGGTTCAAGTGTT +
Preference number: 1 (lower is better)
Translates to: LMSFLSSLLMEVLTS*FDRRITFEFLGSSV
Trigger: AACACTTGAACCAAGAAACTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
3UTR-3UTR TCA 90 bp CTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCAGGCAACTTCCACGGTaGGTGGAGAGATCGAGACAG +
Preference number: 2 (lower is better)
Translates to: LIGMPGMLRANGCHCFVLRQLPR*VERSRQ
Trigger: CTGTCTCGATCTCTCCACTCACCGTGGAAGTTGCCT...GAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATACCTATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR TCA 90 bp CTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAAGGCAACTTCCACGGTaGGTGGAGAGATCGAGACAG +
Preference number: 2 (lower is better)
Translates to: LCSLHVNRFNVCWHQLSVRQLPR*VERSRQ
Trigger: CTGTCTCGATCTCTCCACTCACCGTGGAAGTTGCCT...TACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
3UTR-3UTR TCA 90 bp ACTTCCACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACATTGTCCAAGTCCTTATaGGGAGAGGTCACCTTCTAT +
Preference number: 2 (lower is better)
Translates to: TSTVSGEIETVSDCAEATLSKSL*GEVTFY
Trigger: ATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAA...TGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGTGGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
3UTR-3UTR CCA 90 bp GCTGCACGGAGGAGGCTGGACTGTGACCATAAACTGTTCAGATTTAGAGATCAAAACTTCCACGGTGAGTaGAGAGATCGAGACAGTCTC +
Preference number: 2 (lower is better)
Translates to: AARRRLDCDHKLFRFRDQNFHGE*RDRDSL
Trigger: GAGACTGTCTCGATCTCTCCACTCACCGTGGAAGTT...TTGATCTCTAAATCTGAACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR GCA 90 bp ACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCGAAGTGTTGACCAGTTaGTTTGATCGTAGGATTACA +
Preference number: 2 (lower is better)
Translates to: TVSGEIETVSDCAEATHCEVLTS*FDRRIT
Trigger: TGTAATCCTACGATCAAAGCAACTGGTCAACACTTC...GCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
3UTR-3UTR CCA 90 bp ACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCGTTGCAAACATCTCATaGGCTGATGTTCTATCTGAT +
Preference number: 2 (lower is better)
Translates to: TVSGEIETVSDCAEATHCVANIS*ADVLSD
Trigger: ATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC...GCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
3UTR-3UTR CCA 90 bp AAGCTACATAGTGATTTGGGTCCTTTCCTCTGTGTGCTGATTGCCACTGTTGATCTGCACGGAGGAGGCTaGACTGTGACCATAAACTGT +
Preference number: 2 (lower is better)
Translates to: KLHSDLGPFLCVLIATVDLHGGG*TVTINC
Trigger: ACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAG...ATCAACAGTGGCAATCAGCACACAGAGGAAAGGACCCAAATCACTATGTAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR TCA 90 bp CTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCTTGTCCAAGTCCTTATaGGGAGAGGTCACCTTCTAT +
Preference number: 2 (lower is better)
Translates to: LIGMPGMLRANGCHCFVLLSKSL*GEVTFY
Trigger: ATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAA...GAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATACCTATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR TCA 90 bp ACTTCCACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACATGTCTTCAGATAATCTaGGTTGTCCAAGTCCTTATG +
Preference number: 2 (lower is better)
Translates to: TSTVSGEIETVSDCAEATCLQII*VVQVLM
Trigger: CATAAGGACTTGGACAACTCAGATTATCTGAAGACA...TGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGTGGAAGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
3UTR-3UTR TCA 90 bp AAGGAATTATTAAGCCAAGATACCTCCTTTAGCATGTTTTTCTCTCCCAGGGTTAGGCAACTTCCACGGTaGGTGGAGAGATCGAGACAG +
Preference number: 2 (lower is better)
Translates to: KELLSQDTSFSMFFSPRVRQLPR*VERSRQ
Trigger: CTGTCTCGATCTCTCCACTCACCGTGGAAGTTGCCT...AACCCTGGGAGAGAAAAACATGCTAAAGGAGGTATCTTGGCTTAATAATTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR CCA 90 bp GCTGCACGGAGGAGGCTGGACTGTGACCATAAACTGTTCAGATTTAGAGATCAAAAAACGCTATTCATATaGCAAGAGGATAGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: AARRRLDCDHKLFRFRDQKTLFI*QEDRRG
Trigger: CCCTCTCCTATCCTCTTGCCATATGAATAGCGTTTT...TTGATCTCTAAATCTGAACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR CCA 90 bp CTGATTAACACTGAAATGAAGAACAAGGCCACAGATAGAGTCCGATGTAACTGGCTCCCAGGGTTGTTGTaGTGGAAGACAGGTTTCATG +
Preference number: 2 (lower is better)
Translates to: LINTEMKNKATDRVRCNWLPGLL*WKTGFM
Trigger: CATGAAACCTGTCTTCCACCACAACAACCCTGGGAG...CCAGTTACATCGGACTCTATCTGTGGCCTTGTTCTTCATTTCAGTGTTAATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR TCA 90 bp AAGCTACATAGTGATTTGGGTCCTTTCCTCTGTGTGCTGATTGCCACTGTTGATTTGTCCAAGTCCTTATaGGGAGAGGTCACCTTCTAT +
Preference number: 2 (lower is better)
Translates to: KLHSDLGPFLCVLIATVDLSKSL*GEVTFY
Trigger: ATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAA...ATCAACAGTGGCAATCAGCACACAGAGGAAAGGACCCAAATCACTATGTAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR TCA 90 bp CACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCTGTCTTCAGATAATCTaGGTTGTCCAAGTCCTTATG +
Preference number: 2 (lower is better)
Translates to: HVNRFNVCWHQLSVDQLSCLQII*VVQVLM
Trigger: CATAAGGACTTGGACAACTCAGATTATCTGAAGACA...GGAAAGCTGATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
3UTR-3UTR TCA 90 bp ACAATACGTGTAAGTTTACTTGACTGTGGAATGCCAAGGGAGAAGGAACTGCAATCTTTTGTAGGAAGATaGGGTGCTGTGGAAGCCATG +
Preference number: 2 (lower is better)
Translates to: TIRVSLLDCGMPREKELQSFVGR*GAVEAM
Trigger: CATGGCTTCCACAGCACCTCATCTTCCTACAAAAGA...TTGCAGTTCCTTCTCCCTTGGCATTCCACAGTCAAGTAAACTTACACGTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560948.1
3UTR-3UTR GCA 90 bp CTGACAAGTACTGGTTTAATGCTAATCTGGCTCATCATTTTGGGACAGGGGCAGAACCGCTTTAATGTATaGTGGCATCAGCTGAGTGTA +
Preference number: 2 (lower is better)
Translates to: LTSTGLMLIWLIILGQGQNRFNV*WHQLSV
Trigger: TACACTCAGCTGATGCCAGCATACATTAAAGCGGTT...CTGCCCCTGTCCCAAAATGATGAGCCAGATTAGCATTAAACCAGTACTTGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR CCA 90 bp CTGACAAGTACTGGTTTAATGCTAATCTGGCTCATCATTTTGGGACAGGGGCAGCGCTTTAATGTATGCTaGCATCAGCTGAGTGTAGAT +
Preference number: 2 (lower is better)
Translates to: LTSTGLMLIWLIILGQGQRFNVC*HQLSVD
Trigger: ATCTACACTCAGCTGATGCCAGCATACATTAAAGCG...CTGCCCCTGTCCCAAAATGATGAGCCAGATTAGCATTAAACCAGTACTTGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR CCA 90 bp CAGGGTTGTTGTGGTGGAAGACAGGTTTCATGGAAGTTCAAAGTGATTATGTCTATGCTAGCTAGGCTATaGTCACAGATGGTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: QGCCGGRQVSWKFKVIMSMLARL*SQMVSA
Trigger: AGCAGAGACCATCTGTGACCATAGCCTAGCTAGCAT...AGACATAATCACTTTGAACTTCCATGAAACCTGTCTTCCACCACAACAACCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR CCA 90 bp CAGGGTTGTTGTGGTGGAAGACAGGTTTCATGGAAGTTCAAAGTGATTATGTCTTCTGGCTCATCATTTTaGGACAGGGGCAGATGGTTT +
Preference number: 2 (lower is better)
Translates to: QGCCGGRQVSWKFKVIMSSGSSF*DRGRWF
Trigger: AAACCATCTGCCCCTGTCCCAAAATGATGAGCCAGA...AGACATAATCACTTTGAACTTCCATGAAACCTGTCTTCCACCACAACAACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR TCA 90 bp CTGATTAACACTGAAATGAAGAACAAGGCCACAGATAGAGTCCGATGTAACTGGTTGTCCAAGTCCTTATaGGGAGAGGTCACCTTCTAT +
Preference number: 2 (lower is better)
Translates to: LINTEMKNKATDRVRCNWLSKSL*GEVTFY
Trigger: ATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAA...CCAGTTACATCGGACTCTATCTGTGGCCTTGTTCTTCATTTCAGTGTTAATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR TCA 90 bp CTGACAAGTACTGGTTTAATGCTAATCTGGCTCATCATTTTGGGACAGGGGCAGTGTCTTCAGATAATCTaGGTTGTCCAAGTCCTTATG +
Preference number: 2 (lower is better)
Translates to: LTSTGLMLIWLIILGQGQCLQII*VVQVLM
Trigger: CATAAGGACTTGGACAACTCAGATTATCTGAAGACA...CTGCCCCTGTCCCAAAATGATGAGCCAGATTAGCATTAAACCAGTACTTGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR TCA 90 bp AAGCTACATAGTGATTTGGGTCCTTTCCTCTGTGTGCTGATTGCCACTGTTGATATAAGGAAATACGGGTaGCCATTGCTCTTGTATTCC +
Preference number: 2 (lower is better)
Translates to: KLHSDLGPFLCVLIATVDIRKYG*PLLLYS
Trigger: GGAATACAAGAGCAATGGTCACCCGTATTTCCTTAT...ATCAACAGTGGCAATCAGCACACAGAGGAAAGGACCCAAATCACTATGTAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR TCA 90 bp CTGATTAACACTGAAATGAAGAACAAGGCCACAGATAGAGTCCGATGTAACTGGCTTTCCTCTGTGTGCTaGTTGCCACTGTTGATATTG +
Preference number: 2 (lower is better)
Translates to: LINTEMKNKATDRVRCNWLSSVC*LPLLIL
Trigger: CAATATCAACAGTGGCAATCAGCACACAGAGGAAAG...CCAGTTACATCGGACTCTATCTGTGGCCTTGTTCTTCATTTCAGTGTTAATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR TCA 90 bp GAAGATGGAGGAGGAATGGGATTCATTCTTCCAGACAATACGTGTAAGTTTACTCAGCTATTGTCTCAGTaGCTTCAGAAGACCCTTTGG +
Preference number: 2 (lower is better)
Translates to: EDGGGMGFILPDNTCKFTQLLSQ*LQKTLW
Trigger: CCAAAGGGTCTTCTGAAGTCACTGAGACAATAGCTG...AGTAAACTTACACGTATTGTCTGGAAGAATGAATCCCATTCCTCCTCCATCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560948.1
3UTR-3UTR GCA 90 bp CAATGGTTGTCACTGCTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGGAAGTGTTGACCAGTTaGTTTGATCGTAGGATTACA +
Preference number: 2 (lower is better)
Translates to: QWLSLLCSLHVNRFNVCWEVLTS*FDRRIT
Trigger: TGTAATCCTACGATCAAAGCAACTGGTCAACACTTC...CCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAGCAGTGACAACCATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
3UTR-3UTR TCA 90 bp TCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTGTCCAAGTCCTTATaGGGAGAGGTCACCTTCTAT +
Preference number: 2 (lower is better)
Translates to: SLLMEVLTSCFDRRITFELSKSL*GEVTFY
Trigger: ATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAA...CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
3UTR-3UTR TCA 90 bp AAGCTACATAGTGATTTGGGTCCTTTCCTCTGTGTGCTGATTGCCACTGTTGATTGTCTTCAGATAATCTaGGTTGTCCAAGTCCTTATG +
Preference number: 2 (lower is better)
Translates to: KLHSDLGPFLCVLIATVDCLQII*VVQVLM
Trigger: CATAAGGACTTGGACAACTCAGATTATCTGAAGACA...ATCAACAGTGGCAATCAGCACACAGAGGAAAGGACCCAAATCACTATGTAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR TCA 90 bp ACTAAACACAGCAACTTTATGGGATTGTATCCAGATTACATAAGCCCACACCAGACGTGTAAGTTTACTTaGCTGTGGAATGCCAAGGGA +
Preference number: 2 (lower is better)
Translates to: TKHSNFMGLYPDYISPHQTCKFT*LWNAKG
Trigger: TCCCTTGGCATTCCACAGTCAAGTAAACTTACACGT...CTGGTGTGGGCTTATGTAATCTGGATACAATCCCATAAAGTTGCTGTGTTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560948.1
3UTR-3UTR GCA 90 bp TCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGAAGTGTTGACCAGTTaGTTTGATCGTAGGATTACA +
Preference number: 2 (lower is better)
Translates to: SRQSLIVQKRHTACNKRFEVLTS*FDRRIT
Trigger: TGTAATCCTACGATCAAAGCAACTGGTCAACACTTC...AAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
3UTR-3UTR GCA 90 bp CAGGGTTGTTGTGGTGGAAGACAGGTTTCATGGAAGTTCAAAGTGATTATGTCTATTTATCACACTACCTaGCTTGGTGACTACTGGGTT +
Preference number: 2 (lower is better)
Translates to: QGCCGGRQVSWKFKVIMSIYHTT*LGDYWV
Trigger: AACCCAGTAGTCACCAAGGCAGGTAGTGTGATAAAT...AGACATAATCACTTTGAACTTCCATGAAACCTGTCTTCCACCACAACAACCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR CCA 90 bp AAGCTACATAGTGATTTGGGTCCTTTCCTCTGTGTGCTGATTGCCACTGTTGATGTTGCAAACATCTCATaGGCTGATGTTCTATCTGAT +
Preference number: 2 (lower is better)
Translates to: KLHSDLGPFLCVLIATVDVANIS*ADVLSD
Trigger: ATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC...ATCAACAGTGGCAATCAGCACACAGAGGAAAGGACCCAAATCACTATGTAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR CCA 90 bp TCACAAATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGATGCTAGCTAGGCTATaGTCACAGATGGTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: SQMTDLLGIILIRVPEVLMLARL*SQMVSA
Trigger: AGCAGAGACCATCTGTGACCATAGCCTAGCTAGCAT...CAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCATTTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR TCA 90 bp CTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGTCTTCAGATAATCTaGGTTGTCCAAGTCCTTATG +
Preference number: 2 (lower is better)
Translates to: LSDELPIFTSDGSVDQLLCLQII*VVQVLM
Trigger: CATAAGGACTTGGACAACTCAGATTATCTGAAGACA...AAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
3UTR-3UTR GCA 90 bp CTGATTAACACTGAAATGAAGAACAAGGCCACAGATAGAGTCCGATGTAACTGGAATACGGGTGACCATTaGTCTTGTATTCCATTAGGT +
Preference number: 2 (lower is better)
Translates to: LINTEMKNKATDRVRCNWNTGDH*SCIPLG
Trigger: ACCTAATGGAATACAAGAGCAATGGTCACCCGTATT...CCAGTTACATCGGACTCTATCTGTGGCCTTGTTCTTCATTTCAGTGTTAATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR CCA 90 bp CTGATTAACACTGAAATGAAGAACAAGGCCACAGATAGAGTCCGATGTAACTGGGTTGCAAACATCTCATaGGCTGATGTTCTATCTGAT +
Preference number: 2 (lower is better)
Translates to: LINTEMKNKATDRVRCNWVANIS*ADVLSD
Trigger: ATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC...CCAGTTACATCGGACTCTATCTGTGGCCTTGTTCTTCATTTCAGTGTTAATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR CCA 90 bp CAGGGTTGTTGTGGTGGAAGACAGGTTTCATGGAAGTTCAAAGTGATTATGTCTGTTGCAAACATCTCATaGGCTGATGTTCTATCTGAT +
Preference number: 2 (lower is better)
Translates to: QGCCGGRQVSWKFKVIMSVANIS*ADVLSD
Trigger: ATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC...AGACATAATCACTTTGAACTTCCATGAAACCTGTCTTCCACCACAACAACCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR CCA 90 bp CAGGGTTGTTGTGGTGGAAGACAGGTTTCATGGAAGTTCAAAGTGATTATGTCTGGTTTAATGCTAATCTaGCTCATCATTTTGGGACAG +
Preference number: 2 (lower is better)
Translates to: QGCCGGRQVSWKFKVIMSGLMLI*LIILGQ
Trigger: CTGTCCCAAAATGATGAGCCAGATTAGCATTAAACC...AGACATAATCACTTTGAACTTCCATGAAACCTGTCTTCCACCACAACAACCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR TCA 90 bp AAGGAATTATTAAGCCAAGATACCTCCTTTAGCATGTTTTTCTCTCCCAGGGTTATAAGGAAATACGGGTaGCCATTGCTCTTGTATTCC +
Preference number: 2 (lower is better)
Translates to: KELLSQDTSFSMFFSPRVIRKYG*PLLLYS
Trigger: GGAATACAAGAGCAATGGTCACCCGTATTTCCTTAT...AACCCTGGGAGAGAAAAACATGCTAAAGGAGGTATCTTGGCTTAATAATTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR TCA 90 bp GTTAATCAGATGTTGAGCTTAGATTTGAATCGAGGACTATTTAATGCCAAAGCTTTAGCTCCACAAGCCTaGTTCTGTCCTGAAGGGTTT +
Preference number: 2 (lower is better)
Translates to: VNQMLSLDLNRGLFNAKALAPQA*FCPEGF
Trigger: AAACCCTTCAGGACAGAATCAGGCTTGTGGAGCTAA...AGCTTTGGCATTAAATAGTCCTCGATTCAAATCTAAGCTCAACATCTGATTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
3UTR-3UTR GCA 90 bp TCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAAACATGAAGTGTTGACCAGTTaGTTTGATCGTAGGATTACA +
Preference number: 2 (lower is better)
Translates to: SDCAEATHCLQQKICCKHEVLTS*FDRRIT
Trigger: TGTAATCCTACGATCAAAGCAACTGGTCAACACTTC...ATGTTTGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
3UTR-3UTR GCA 90 bp AAGCTACATAGTGATTTGGGTCCTTTCCTCTGTGTGCTGATTGCCACTGTTGATGTATGTAGTACTTACTaGTTGGAAAACAAAGCGATT +
Preference number: 2 (lower is better)
Translates to: KLHSDLGPFLCVLIATVDVCSTY*LENKAI
Trigger: AATCGCTTTGTTTTCCAAGCAGTAAGTACTACATAC...ATCAACAGTGGCAATCAGCACACAGAGGAAAGGACCCAAATCACTATGTAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR CCA 90 bp ATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGTCTTGTCGCTTTAATGTATGCTaGCATCAGCTGAGTGTAGAT +
Preference number: 2 (lower is better)
Translates to: MTDLLGIILIRVPEVLSCRFNVC*HQLSVD
Trigger: ATCTACACTCAGCTGATGCCAGCATACATTAAAGCG...ACAAGACAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR CCA 90 bp CTGATTAACACTGAAATGAAGAACAAGGCCACAGATAGAGTCCGATGTAACTGGGGAAGACAGGTTTCATaGAAGTTCAAAGTGATTATG +
Preference number: 2 (lower is better)
Translates to: LINTEMKNKATDRVRCNWGRQVS*KFKVIM
Trigger: CATAATCACTTTGAACTTCCATGAAACCTGTCTTCC...CCAGTTACATCGGACTCTATCTGTGGCCTTGTTCTTCATTTCAGTGTTAATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR CAA 90 bp ATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTaGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTTCTTGGT +
Preference number: 2 (lower is better)
Translates to: MFYLMSFLSSLLMEV*TSCFDRRITFEFLG
Trigger: ACCAAGAAACTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
3UTR-3UTR TCA 90 bp AAGGAATTATTAAGCCAAGATACCTCCTTTAGCATGTTTTTCTCTCCCAGGGTTTGTCTTCAGATAATCTaGGTTGTCCAAGTCCTTATG +
Preference number: 2 (lower is better)
Translates to: KELLSQDTSFSMFFSPRVCLQII*VVQVLM
Trigger: CATAAGGACTTGGACAACTCAGATTATCTGAAGACA...AACCCTGGGAGAGAAAAACATGCTAAAGGAGGTATCTTGGCTTAATAATTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR CCA 90 bp AAGGAATTATTAAGCCAAGATACCTCCTTTAGCATGTTTTTCTCTCCCAGGGTTGGTTTAATGCTAATCTaGCTCATCATTTTGGGACAG +
Preference number: 2 (lower is better)
Translates to: KELLSQDTSFSMFFSPRVGLMLI*LIILGQ
Trigger: CTGTCCCAAAATGATGAGCCAGATTAGCATTAAACC...AACCCTGGGAGAGAAAAACATGCTAAAGGAGGTATCTTGGCTTAATAATTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR CCA 90 bp ATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGTCTTGTGGAAGACAGGTTTCATaGAAGTTCAAAGTGATTATG +
Preference number: 2 (lower is better)
Translates to: MTDLLGIILIRVPEVLSCGRQVS*KFKVIM
Trigger: CATAATCACTTTGAACTTCCATGAAACCTGTCTTCC...ACAAGACAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR CCA 90 bp TCACAAATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGGTAGTACTTACTGCTTaGAAAACAAAGCGATTTCTA +
Preference number: 2 (lower is better)
Translates to: SQMTDLLGIILIRVPEVLVVLTA*KTKRFL
Trigger: TAGAAATCGCTTTGTTTTCCAAGCAGTAAGTACTAC...CAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCATTTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR TCA 72 bp CCAAGAGAAGCAATCTGCCAGCATACCAAGAGGATGTaGCAATTGCCATGGGTTTCGCACGCACAGGTCCTA +
Preference number: 3 (lower is better)
Translates to: PREAICQHTKRM*QLPWVSHAQVL
Trigger: TAGGACCTGTGCGTGCGAAACCCATGGCAATTGTCACATCCTCTTGGTATGCTGGCAGATTGCTTCTCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
3UTR CCA 72 bp GACACTAATAGGTATGCCGGGAATGCTAAGGGCCAATaGTTGTCACTGCTTTGTTCTCTGCACGTGAACCGC +
Preference number: 3 (lower is better)
Translates to: DTNRYAGNAKGQ*LSLLCSLHVNR
Trigger: GCGGTTCACGTGCAGAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATACCTATTAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR CAA 90 bp ACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCCTTCTGATGGAAGTGTaGACCAGTTGCTTTGATCGT +
Preference number: 3 (lower is better)
Translates to: TVSGEIETVSDCAEATHCLLMEV*TSCFDR
Trigger: ACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG...GCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
3UTR TCA 72 bp AACTTCCACGGTGAGTGGAGAGATCGAGACAGTCTCTaGTTGTGCAGAAGCGACACACTGCTTGCAACAAAA +
Preference number: 3 (lower is better)
Translates to: NFHGEWRDRDSL*LCRSDTLLATK
Trigger: TTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGTGGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
3UTR GCA 72 bp AAGCAATCTGCCAGCATACCAAGAGGATGTGACAATTaGCATGGGTTTCGCACGCACAGGTCCTACAAAAAG +
Preference number: 3 (lower is better)
Translates to: KQSASIPRGCDN*HGFRTHRSYKK
Trigger: CTTTTTGTAGGACCTGTGCGTGCGAAACCCATGGCAATTGTCACATCCTCTTGGTATGCTGGCAGATTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
3UTR GCA 72 bp CTGCTTTGTTCTCTGCACGTGAACCGCTTTAATGTATaGTGGCATCAGCTGAGTGTAGATCAGCTTTCCACA +
Preference number: 3 (lower is better)
Translates to: LLCSLHVNRFNV*WHQLSVDQLST
Trigger: TGTGGAAAGCTGATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
3UTR-3UTR CAA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGGTGAGTGGAGAGATCCTTCTGATGGAAGTGTaGACCAGTTGCTTTGATCGT +
Preference number: 3 (lower is better)
Translates to: HLSIQFRHKATSTVSGEILLMEV*TSCFDR
Trigger: ACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG...GATCTCTCCACTCACCGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
3UTR-3UTR CAA 90 bp CCCTTCCTTTTTAAGACACTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTGAAGCGACACACTGCTaGCAACAAAAGATTTGTTGC +
Preference number: 3 (lower is better)
Translates to: PFLFKTLIGMPGMLRANGEATHC*QQKICC
Trigger: GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTC...ACCATTGGCCCTTAGCATTCCCGGCATACCTATTAGTGTCTTAAAAAGGAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR CAA 90 bp TATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCTGCACGTGGTAGTTACAATGCATTaGTCAATTCAGTTTAGGCAC +
Preference number: 3 (lower is better)
Translates to: YAGNAKGQWLSLLCSLHVVVTMH*SIQFRH
Trigger: GTGCCTAAACTGAATTGACAAATGCATTGTAACTAC...CACGTGCAGAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR TCA 72 bp TTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTaGGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTT +
Preference number: 3 (lower is better)
Translates to: FSLLSGLCLQII*VVQVLMRRGHL
Trigger: AAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
3UTR CCA 72 bp CCAGATTACATAAGCCCACACCAGAGCCAAAGAAGATaGAGGAGGAATGGGATTCATTCTTCCAGACAATAC +
Preference number: 3 (lower is better)
Translates to: PDYISPHQSQRR*RRNGIHSSRQY
Trigger: GTATTGTCTGGAAGAATGAATCCCATTCCTCCTCCATCTTCTTTGGCTCTGGTGTGGGCTTATGTAATCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560948.1
3UTR-3UTR CAA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCCTTCTGATGGAAGTGTaGACCAGTTGCTTTGATCGT +
Preference number: 3 (lower is better)
Translates to: TVSDCAEATHCLQQKICCLLMEV*TSCFDR
Trigger: ACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
3UTR-3UTR CAA 90 bp CTGACAAGTACTGGTTTAATGCTAATCTGGCTCATCATTTTGGGACAGGGGCAGGCAACAAAAGATTTGTaGCAAACATCTCATGGGCTG +
Preference number: 3 (lower is better)
Translates to: LTSTGLMLIWLIILGQGQATKDL*QTSHGL
Trigger: CAGCCCATGAGATGTTTGCAACAAATCTTTTGTTGC...CTGCCCCTGTCCCAAAATGATGAGCCAGATTAGCATTAAACCAGTACTTGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR CAA 90 bp CTGATTAACACTGAAATGAAGAACAAGGCCACAGATAGAGTCCGATGTAACTGGATCACACTACCTGCCTaGGTGACTACTGGGTTTTGT +
Preference number: 3 (lower is better)
Translates to: LINTEMKNKATDRVRCNWITLPA*VTTGFC
Trigger: ACAAAACCCAGTAGTCACCAAGGCAGGTAGTGTGAT...CCAGTTACATCGGACTCTATCTGTGGCCTTGTTCTTCATTTCAGTGTTAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR CCA 72 bp CTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTaGCATCAGCTGAGTGTAGATCAGCTTTCCACATTA +
Preference number: 3 (lower is better)
Translates to: LCSLHVNRFNVC*HQLSVDQLSTL
Trigger: TAATGTGGAAAGCTGATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
3UTR-3UTR CAA 90 bp CAGGGTTGTTGTGGTGGAAGACAGGTTTCATGGAAGTTCAAAGTGATTATGTCTGAAGCGACACACTGCTaGCAACAAAAGATTTGTTGC +
Preference number: 3 (lower is better)
Translates to: QGCCGGRQVSWKFKVIMSEATHC*QQKICC
Trigger: GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTC...AGACATAATCACTTTGAACTTCCATGAAACCTGTCTTCCACCACAACAACCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR CAA 90 bp CCCTTCCTTTTTAAGACACTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTGTAGTTACAATGCATTaGTCAATTCAGTTTAGGCAC +
Preference number: 3 (lower is better)
Translates to: PFLFKTLIGMPGMLRANGVVTMH*SIQFRH
Trigger: GTGCCTAAACTGAATTGACAAATGCATTGTAACTAC...ACCATTGGCCCTTAGCATTCCCGGCATACCTATTAGTGTCTTAAAAAGGAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR CAA 90 bp AAGGAATTATTAAGCCAAGATACCTCCTTTAGCATGTTTTTCTCTCCCAGGGTTATCACACTACCTGCCTaGGTGACTACTGGGTTTTGT +
Preference number: 3 (lower is better)
Translates to: KELLSQDTSFSMFFSPRVITLPA*VTTGFC
Trigger: ACAAAACCCAGTAGTCACCAAGGCAGGTAGTGTGAT...AACCCTGGGAGAGAAAAACATGCTAAAGGAGGTATCTTGGCTTAATAATTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR TCA 72 bp GGATTCATTCTTCCAGACAATACGTGTAAGTTTACTTaGCTGTGGAATGCCAAGGGAGAAGGAACTGCAATT +
Preference number: 3 (lower is better)
Translates to: GFILPDNTCKFT*LWNAKGEGTAI
Trigger: AATTGCAGTTCCTTCTCCCTTGGCATTCCACAGTCAAGTAAACTTACACGTATTGTCTGGAAGAATGAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560948.1
3UTR CCA 72 bp CCTTTAGCATGTTTTTCTCTCCCAGGGTTGTTGTGGTaGAAGACAGGTTTCATGGAAGTTCAAAGTGATTAT +
Preference number: 3 (lower is better)
Translates to: PLACFSLPGLLW*KTGFMEVQSDY
Trigger: ATAATCACTTTGAACTTCCATGAAACCTGTCTTCCACCACAACAACCCTGGGAGAGAAAAACATGCTAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR CAA 90 bp ATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGTCTTGTCTTCTGATGGAAGTGTaGACCAGTTGCTTTGATCGT +
Preference number: 3 (lower is better)
Translates to: MTDLLGIILIRVPEVLSCLLMEV*TSCFDR
Trigger: ACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG...ACAAGACAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR CAA 90 bp AAGCTACATAGTGATTTGGGTCCTTTCCTCTGTGTGCTGATTGCCACTGTTGATTGTAGTACTTACTGCTaGGAAAACAAAGCGATTTCT +
Preference number: 3 (lower is better)
Translates to: KLHSDLGPFLCVLIATVDCSTYC*ENKAIS
Trigger: AGAAATCGCTTTGTTTTCCAAGCAGTAAGTACTACA...ATCAACAGTGGCAATCAGCACACAGAGGAAAGGACCCAAATCACTATGTAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR-3UTR CAA 90 bp CAGGGTTGTTGTGGTGGAAGACAGGTTTCATGGAAGTTCAAAGTGATTATGTCTGTAGTTACAATGCATTaGTCAATTCAGTTTAGGCAC +
Preference number: 3 (lower is better)
Translates to: QGCCGGRQVSWKFKVIMSVVTMH*SIQFRH
Trigger: GTGCCTAAACTGAATTGACAAATGCATTGTAACTAC...AGACATAATCACTTTGAACTTCCATGAAACCTGTCTTCCACCACAACAACCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR TCA 72 bp AGCTACATAGTGATTTGGGTCCTTTCCTCTGTGTGCTaGTTGCCACTGTTGATATTGGCTATAAGGAATTAT +
Preference number: 3 (lower is better)
Translates to: SYIVIWVLSSVC*LPLLILAIRNY
Trigger: ATAATTCCTTATAGCCAATATCAACAGTGGCAATCAGCACACAGAGGAAAGGACCCAAATCACTATGTAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR GCA 72 bp TTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTaGTTTGATCGTAGGATTACATTTGAGTTTCTTGGT +
Preference number: 3 (lower is better)
Translates to: FLSSLLMEVLTS*FDRRITFEFLG
Trigger: ACCAAGAAACTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
3UTR-3UTR CAA 90 bp ATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGTCTTGTGTAGTTACAATGCATTaGTCAATTCAGTTTAGGCAC +
Preference number: 3 (lower is better)
Translates to: MTDLLGIILIRVPEVLSCVVTMH*SIQFRH
Trigger: GTGCCTAAACTGAATTGACAAATGCATTGTAACTAC...ACAAGACAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TTCATGAAAGGTGTTGGGGACAAGCCTTCATGGGCTCCTAATCGACTGTCATTCCTGGGGGCGCCGGGATaGCTTCCAGGACCCCGACTC +
Preference number: 4 (lower is better)
Translates to: FMKGVGDKPSWAPNRLSFLGAPG*LPGPRL
Trigger: GAGTCGGGGTCCTGGAAGTCATCCCGGCGCCCCCAG...GAATGACAGTCGATTAGGAGCCCATGAAGGCTTGTCCCCAACACCTTTCATGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561152.1
CDS-3UTR TCA 90 bp ACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCGGCAGCAACGTAAGGTaGACTGCTGGTACTGCCGCG +
Preference number: 4 (lower is better)
Translates to: TVSGEIETVSDCAEATHCGSNVR*TAGTAA
Trigger: CGCGGCAGTACCAGCAGTTCACCTTACGTTGCTGCC...GCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp ACTTCCACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACAGGCAGCAACGTAAGGTaGACTGCTGGTACTGCCGCG +
Preference number: 4 (lower is better)
Translates to: TSTVSGEIETVSDCAEATGSNVR*TAGTAA
Trigger: CGCGGCAGTACCAGCAGTTCACCTTACGTTGCTGCC...TGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGTGGAAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp AGGCTATGGTCACAGATGGTCTCTGCTTACCACTGTAAGGTAAATGTGCAAAGCGCTTGGGCTTCCCCTTaGACCGCCCAGCGGCTCGGT +
Preference number: 4 (lower is better)
Translates to: RLWSQMVSAYHCKVNVQSAWASP*TAQRLG
Trigger: ACCGAGCCGCTGGGCGGTGCAAGGGGAAGCCCAAGC...GCTTTGCACATTTACCTTACAGTGGTAAGCAGAGACCATCTGTGACCATAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
CDS-3UTR GCA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGGTGAGTGGAGAGATCGCTTGGGCTTCCCCTTaGACCGCCCAGCGGCTCGGT +
Preference number: 4 (lower is better)
Translates to: HLSIQFRHKATSTVSGEIAWASP*TAQRLG
Trigger: ACCGAGCCGCTGGGCGGTGCAAGGGGAAGCCCAAGC...GATCTCTCCACTCACCGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
CDS-3UTR GCA 90 bp ACTTCCACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACAGGGGATGAAGGTGCTTaGCCTCCAGGTCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: TSTVSGEIETVSDCAEATGDEGA*PPGLGH
Trigger: GTGGCCAAGACCTGGAGGGCAAGCACCTTCATCCCC...TGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGTGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGCCGGGAGAACGGGCTTaGGCTTCCCCTTGCACCGCC +
Preference number: 4 (lower is better)
Translates to: VLMRRGHLLSSLLITLELPGERA*ASPCTA
Trigger: GGCGGTGCAAGGGGAAGCCCAAGCCCGTTCTCCCGG...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
CDS-3UTR CCA 90 bp AGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACCCAGGATGGGTTCCTaGCAGTGTGGTTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: SGEIETVSDCAEATHCLQPRMGS*QCGWRL
Trigger: GAGCCGCCAACCACACTGCCAGGAACCCATCCTGGG...TTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp ACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTCATAGCTTGGGGATaGAGGTGCTTGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TVSGEIETVSDCAEATHCFIAWG*RCLPSR
Trigger: CCTGGAGGGCAAGCACCTTCATCCCCAAGCTATGAA...GCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp CCCTTCCTTTTTAAGACACTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTCGGCTCGGTTCACTTTaGCCCGCACGAGCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: PFLFKTLIGMPGMLRANGRLGSL*PARALG
Trigger: CCCGAGAGCTCGTGCGGGGCAAAGTGAACCGAGCCG...ACCATTGGCCCTTAGCATTCCCGGCATACCTATTAGTGTCTTAAAAAGGAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
CDS-3UTR CCA 90 bp CCCTTCCTTTTTAAGACACTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTACGAGCTCTCGGGTCTaGGAGGGGGAGGCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: PFLFKTLIGMPGMLRANGTSSRV*EGEAAF
Trigger: GAAAGCCGCCTCCCCCTCCCAGACCCGAGAGCTCGT...ACCATTGGCCCTTAGCATTCCCGGCATACCTATTAGTGTCTTAAAAAGGAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
CDS-3UTR CCA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCCCGGGAGAACGGGCTTaGGCTTCCCCTTGCACCGCC +
Preference number: 4 (lower is better)
Translates to: TVSDCAEATHCLQQKICCPGERA*ASPCTA
Trigger: GGCGGTGCAAGGGGAAGCCCAAGCCCGTTCTCCCGG...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
CDS-3UTR TCA 90 bp TATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCTGCACGTGTTCATAGCTTGGGGATaGAGGTGCTTGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: YAGNAKGQWLSLLCSLHVFIAWG*RCLPSR
Trigger: CCTGGAGGGCAAGCACCTTCATCCCCAAGCTATGAA...CACGTGCAGAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCTGCACGTGAGGCAACTTCCACGGTaGGTGGAGAGATCGAGACAG +
Preference number: 4 (lower is better)
Translates to: YAGNAKGQWLSLLCSLHVRQLPR*VERSRQ
Trigger: CTGTCTCGATCTCTCCACTCACCGTGGAAGTTGCCT...CACGTGCAGAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATCGGCTCGGTTCACTTTaGCCCGCACGAGCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYRLGSL*PARALG
Trigger: CCCGAGAGCTCGTGCGGGGCAAAGTGAACCGAGCCG...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
CDS-3UTR GCA 90 bp ACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCGTGAACTGCTGGTACTaGCGCGATGAAAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: TVSGEIETVSDCAEATHCVNCWY*RDESWT
Trigger: TGTCCAGCTTTCATCGCGGCAGTACCAGCAGTTCAC...GCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp TGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATATCTTCGGCCACTTCTaGCGCCCCGTCTCCGCATCC +
Preference number: 4 (lower is better)
Translates to: CSLHVNRFNVCWHQLSVDIFGHF*RPVSAS
Trigger: GGATGCGGAGACGGGGCGGCAGAAGTGGCCGAAGAT...ATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGTCCTGGCAGTGTGGTTaGCGGCTCTGCCGATACGGC +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLSWQCG*RLCRYG
Trigger: GCCGTATCGGCAGAGCCGCCAACCACACTGCCAGGA...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CTTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTCCTGGCAGTGTGGTTaGCGGCTCTGCCGATACGGC +
Preference number: 4 (lower is better)
Translates to: LLPPVRFVSSDNLSCPSPSWQCG*RLCRYG
Trigger: GCCGTATCGGCAGAGCCGCCAACCACACTGCCAGGA...AGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CCCTTCCTTTTTAAGACACTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTCCCAGGATGGGTTCCTaGCAGTGTGGTTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: PFLFKTLIGMPGMLRANGPRMGS*QCGWRL
Trigger: GAGCCGCCAACCACACTGCCAGGAACCCATCCTGGG...ACCATTGGCCCTTAGCATTCCCGGCATACCTATTAGTGTCTTAAAAAGGAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTCCCAGGATGGGTTCCTaGCAGTGTGGTTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: LLPPVRFVSSDNLSCPSPPRMGS*QCGWRL
Trigger: GAGCCGCCAACCACACTGCCAGGAACCCATCCTGGG...AGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp ATGAAAGGTGTTGGGGACAAGCCTTCATGGGCTCCTAATCGACTGTCATTCAAGATTACGCAAGAGCGCTaGGGGCGCCGGGATGACTTC +
Preference number: 4 (lower is better)
Translates to: MKGVGDKPSWAPNRLSFKITQER*GRRDDF
Trigger: GAAGTCATCCCGGCGCCCCCAGCGCTCTTGCGTAAT...CTTGAATGACAGTCGATTAGGAGCCCATGAAGGCTTGTCCCCAACACCTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561152.1
CDS-3UTR TCA 90 bp CCCTTCCTTTTTAAGACACTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTGGCAGCAACGTAAGGTaGACTGCTGGTACTGCCGCG +
Preference number: 4 (lower is better)
Translates to: PFLFKTLIGMPGMLRANGGSNVR*TAGTAA
Trigger: CGCGGCAGTACCAGCAGTTCACCTTACGTTGCTGCC...ACCATTGGCCCTTAGCATTCCCGGCATACCTATTAGTGTCTTAAAAAGGAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CAATGGTTGTCACTGCTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGGGCAGCAACGTAAGGTaGACTGCTGGTACTGCCGCG +
Preference number: 4 (lower is better)
Translates to: QWLSLLCSLHVNRFNVCWGSNVR*TAGTAA
Trigger: CGCGGCAGTACCAGCAGTTCACCTTACGTTGCTGCC...CCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAGCAGTGACAACCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGGCAGCAACGTAAGGTaGACTGCTGGTACTGCCGCG +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLGSNVR*TAGTAA
Trigger: CGCGGCAGTACCAGCAGTTCACCTTACGTTGCTGCC...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR TCA 90 bp GCTGCACGGAGGAGGCTGGACTGTGACCATAAACTGTTCAGATTTAGAGATCAACCAGGTCTTGGCCACTaGCTGGTACCTGTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: AARRRLDCDHKLFRFRDQPGLGH*LVPVRG
Trigger: ACCTCTCACAGGTACCAGTCAGTGGCCAAGACCTGG...TTGATCTCTAAATCTGAACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp TGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCACATTAACTTTTTCCCTCGGCTCGGTTCACTTTaGCCCGCACGAGCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: CMLASAECRSAFHINFFPRLGSL*PARALG
Trigger: CCCGAGAGCTCGTGCGGGGCAAAGTGAACCGAGCCG...AGGGAAAAAGTTAATGTGGAAAGCTGATCTACACTCAGCTGATGCCAGCATACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
CDS-3UTR GCA 90 bp ATGAAAGGTGTTGGGGACAAGCCTTCATGGGCTCCTAATCGACTGTCATTCAAGGCGGCCATGCGTTGTTaGTGGGGATTCATCTTCGGC +
Preference number: 4 (lower is better)
Translates to: MKGVGDKPSWAPNRLSFKAAMRC*WGFIFG
Trigger: GCCGAAGATGAATCCCCAGCAACAACGCATGGCCGC...CTTGAATGACAGTCGATTAGGAGCCCATGAAGGCTTGTCCCCAACACCTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561152.1
CDS-3UTR GCA 90 bp CTTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTGGGGATGAAGGTGCTTaGCCTCCAGGTCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LLPPVRFVSSDNLSCPSPGDEGA*PPGLGH
Trigger: GTGGCCAAGACCTGGAGGGCAAGCACCTTCATCCCC...AGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp GATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGACGAGCTCTCGGGTCTaGGAGGGGGAGGCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: DVLSDELPIFTSDGSVDQTSSRV*EGEAAF
Trigger: GAAAGCCGCCTCCCCCTCCCAGACCCGAGAGCTCGT...CTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
CDS-3UTR CCA 90 bp AGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAATTGCCCTCCAGGTCTTaGCCACTGACTGGTACCTGT +
Preference number: 4 (lower is better)
Translates to: SGEIETVSDCAEATHCLQLPSRS*PLTGTC
Trigger: ACAGGTACCAGTCAGTGGCCAAGACCTGGAGGGCAA...TTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCATCCTGGCAGTGTGGTTaGCGGCTCTGCCGATACGGC +
Preference number: 4 (lower is better)
Translates to: QSLIVQKRHTACNKRFVASWQCG*RLCRYG
Trigger: GCCGTATCGGCAGAGCCGCCAACCACACTGCCAGGA...TGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTTCCTGGCAGTGTGGTTaGCGGCTCTGCCGATACGGC +
Preference number: 4 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITSWQCG*RLCRYG
Trigger: GCCGTATCGGCAGAGCCGCCAACCACACTGCCAGGA...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGGGTTCCTGGCAGTGTaGTTGGCGGCTCTGCCGATA +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLGFLAV*LAALPI
Trigger: TATCGGCAGAGCCGCCAACCACACTGCCAGGAACCC...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCCCAGGATGGGTTCCTaGCAGTGTGGTTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITPRMGS*QCGWRL
Trigger: GAGCCGCCAACCACACTGCCAGGAACCCATCCTGGG...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp ATTGGCCCAATGAGATCAGCTATTGTCTCAGTGACTTCAGAAGACCCTTTGGTTCCCAGGATGGGTTCCTaGCAGTGTGGTTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: IGPMRSAIVSVTSEDPLVPRMGS*QCGWRL
Trigger: GAGCCGCCAACCACACTGCCAGGAACCCATCCTGGG...AACCAAAGGGTCTTCTGAAGTCACTGAGACAATAGCTGATCTCATTGGGCCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560948.1
CDS-3UTR CCA 90 bp ACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCCTCCCAGGGTTGTTGTaGTGGAAGACAGGTTTCATG +
Preference number: 4 (lower is better)
Translates to: TVSGEIETVSDCAEATHCLPGLL*WKTGFM
Trigger: CATGAAACCTGTCTTCCACCACAACAACCCTGGGAG...GCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GCTGCACGGAGGAGGCTGGACTGTGACCATAAACTGTTCAGATTTAGAGATCAACTGGTACTGCCGCGATaGAAGCTGGACATTGGTGGA +
Preference number: 4 (lower is better)
Translates to: AARRRLDCDHKLFRFRDQLVLPR*KLDIGG
Trigger: TCCACCAATGTCCAGCTTTCATCGCGGCAGTACCAG...TTGATCTCTAAATCTGAACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp AGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAATGCTGTCTGATCCATTaGTGGGAGGAGTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: SGEIETVSDCAEATHCLQCCLIH*WEECVR
Trigger: CCTCACACACTCCTCCCATCAATGGATCAGACAGCA...TTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GCTGCACGGAGGAGGCTGGACTGTGACCATAAACTGTTCAGATTTAGAGATCAATGCATCACCTGTCTGTaGGCTTCCAGCAGCATTCCC +
Preference number: 4 (lower is better)
Translates to: AARRRLDCDHKLFRFRDQCITCL*ASSSIP
Trigger: GGGAATGCTGCTGGAAGCTCACAGACAGGTGATGCA...TTGATCTCTAAATCTGAACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGCCAGGTCTTGGCCACTaGCTGGTACCTGTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: VLMRRGHLLSSLLITLELPGLGH*LVPVRG
Trigger: ACCTCTCACAGGTACCAGTCAGTGGCCAAGACCTGG...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR TCA 90 bp ACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTTCAGGGAGTGGAGTaGGTTTTCATAGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: TVSGEIETVSDCAEATHCFQGVE*VFIAWG
Trigger: TCCCCAAGCTATGAAAACTCACTCCACTCCCTGAAA...GCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333725.10
ENST00000438423.6
ENST00000559703.1
CDS-3UTR GCA 90 bp AGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAGGGATCAAGCGCTaGAGAGTCATGGAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: SGEIETVSDCAEATHCLQQGIKR*RVMEWS
Trigger: AGACCACTCCATGACTCTGCAGCGCTTGATCCCTTG...TTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp CATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGGGGGATGAAGGTGCTTaGCCTCCAGGTCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: HGLMFYLMSFLSSLLMEVGDEGA*PPGLGH
Trigger: GTGGCCAAGACCTGGAGGGCAAGCACCTTCATCCCC...CACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp CAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAGGGGATGAAGGTGCTTaGCCTCCAGGTCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: QSLIVQKRHTACNKRFVAGDEGA*PPGLGH
Trigger: GTGGCCAAGACCTGGAGGGCAAGCACCTTCATCCCC...TGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGGGGATGAAGGTGCTTaGCCTCCAGGTCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYEGDEGA*PPGLGH
Trigger: GTGGCCAAGACCTGGAGGGCAAGCACCTTCATCCCC...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp AGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAATGTGGTTGGCGGCTCTaGCGATACGGCAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: SGEIETVSDCAEATHCLQCGWRL*RYGRNF
Trigger: AAAGTTTCTGCCGTATCGGCAGAGCCGCCAACCACA...TTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp ACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCCCAAGAGAAGCAATCTaGCAGCATACCAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: TVSGEIETVSDCAEATHCPREAI*QHTKRM
Trigger: CATCCTCTTGGTATGCTGGCAGATTGCTTCTCTTGG...GCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR GCA 90 bp GCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACATCTTCGGCCACTTCTaGCGCCCCGTCTCCGCATCC +
Preference number: 4 (lower is better)
Translates to: ADVLSDELPIFTSDGSVDIFGHF*RPVSAS
Trigger: GGATGCGGAGACGGGGCGGCAGAAGTGGCCGAAGAT...GTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp GCTGCACGGAGGAGGCTGGACTGTGACCATAAACTGTTCAGATTTAGAGATCAAGCCATGCGTTGTTGCTaGGGATTCATCTTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: AARRRLDCDHKLFRFRDQAMRCC*GFIFGH
Trigger: GTGGCCGAAGATGAATCCCCAGCAACAACGCATGGC...TTGATCTCTAAATCTGAACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp ATGAAAGGTGTTGGGGACAAGCCTTCATGGGCTCCTAATCGACTGTCATTCAAGGCCATGCGTTGTTGCTaGGGATTCATCTTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: MKGVGDKPSWAPNRLSFKAMRCC*GFIFGH
Trigger: GTGGCCGAAGATGAATCCCCAGCAACAACGCATGGC...CTTGAATGACAGTCGATTAGGAGCCCATGAAGGCTTGTCCCCAACACCTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561152.1
CDS-3UTR CCA 90 bp ACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCCCACCAAAACCAGGCTaGCTCATCCCATTTGATGAA +
Preference number: 4 (lower is better)
Translates to: TVSGEIETVSDCAEATHCPPKPG*LIPFDE
Trigger: TTCATCAAATGGGATGAGCCAGCCTGGTTTTGGTGG...GCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCTTGCCCTCCAGGTCTTaGCCACTGACTGGTACCTGT +
Preference number: 4 (lower is better)
Translates to: HVNRFNVCWHQLSVDQLSLPSRS*PLTGTC
Trigger: ACAGGTACCAGTCAGTGGCCAAGACCTGGAGGGCAA...GGAAAGCTGATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCCAGCAGGCAAACTGGTaGAAGGTCCCACAGCATGGT +
Preference number: 4 (lower is better)
Translates to: LIGMPGMLRANGCHCFVLQQANW*KVPQHG
Trigger: ACCATGCTGTGGGACCTTCCACCAGTTTGCCTGCTG...GAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATACCTATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATTCCTGGCAGTGTGGTTaGCGGCTCTGCCGATACGGC +
Preference number: 4 (lower is better)
Translates to: LMSFLSSLLMEVLTSCFDSWQCG*RLCRYG
Trigger: GCCGTATCGGCAGAGCCGCCAACCACACTGCCAGGA...ATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CAGGGTTGTTGTGGTGGAAGACAGGTTTCATGGAAGTTCAAAGTGATTATGTCTTCCTGGCAGTGTGGTTaGCGGCTCTGCCGATACGGC +
Preference number: 4 (lower is better)
Translates to: QGCCGGRQVSWKFKVIMSSWQCG*RLCRYG
Trigger: GCCGTATCGGCAGAGCCGCCAACCACACTGCCAGGA...AGACATAATCACTTTGAACTTCCATGAAACCTGTCTTCCACCACAACAACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp GTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCCTGGCAGTGTGGTTaGCGGCTCTGCCGATACGGC +
Preference number: 4 (lower is better)
Translates to: VANISWADVLSDELPIFTSWQCG*RLCRYG
Trigger: GCCGTATCGGCAGAGCCGCCAACCACACTGCCAGGA...AGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp AAGGGAGAAGGAACTGCAATTTTTAGAAGACTCATTGGCCCAATGAGATCAGCTTCCTGGCAGTGTGGTTaGCGGCTCTGCCGATACGGC +
Preference number: 4 (lower is better)
Translates to: KGEGTAIFRRLIGPMRSASWQCG*RLCRYG
Trigger: GCCGTATCGGCAGAGCCGCCAACCACACTGCCAGGA...AGCTGATCTCATTGGGCCAATGAGTCTTCTAAAAATTGCAGTTCCTTCTCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560948.1
CDS-3UTR CCA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTGGGTTCCTGGCAGTGTaGTTGGCGGCTCTGCCGATA +
Preference number: 4 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITGFLAV*LAALPI
Trigger: TATCGGCAGAGCCGCCAACCACACTGCCAGGAACCC...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGGGTTCCTGGCAGTGTaGTTGGCGGCTCTGCCGATA +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYEGFLAV*LAALPI
Trigger: TATCGGCAGAGCCGCCAACCACACTGCCAGGAACCC...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAGGGTTCCTGGCAGTGTaGTTGGCGGCTCTGCCGATA +
Preference number: 4 (lower is better)
Translates to: QSLIVQKRHTACNKRFVAGFLAV*LAALPI
Trigger: TATCGGCAGAGCCGCCAACCACACTGCCAGGAACCC...TGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp GATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGCCCAGGATGGGTTCCTaGCAGTGTGGTTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: DVLSDELPIFTSDGSVDQPRMGS*QCGWRL
Trigger: GAGCCGCCAACCACACTGCCAGGAACCCATCCTGGG...CTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CTGATTAACACTGAAATGAAGAACAAGGCCACAGATAGAGTCCGATGTAACTGGCCCAGGATGGGTTCCTaGCAGTGTGGTTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: LINTEMKNKATDRVRCNWPRMGS*QCGWRL
Trigger: GAGCCGCCAACCACACTGCCAGGAACCCATCCTGGG...CCAGTTACATCGGACTCTATCTGTGGCCTTGTTCTTCATTTCAGTGTTAATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTCCCAGGATGGGTTCCTaGCAGTGTGGTTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: LSDELPIFTSDGSVDQLLPRMGS*QCGWRL
Trigger: GAGCCGCCAACCACACTGCCAGGAACCCATCCTGGG...AAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp AGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAATCACTAAGCCCAGGATaGGTTCCTGGCAGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: SGEIETVSDCAEATHCLQSLSPG*VPGSVV
Trigger: AACCACACTGCCAGGAACCCATCCTGGGCTTAGTGA...TTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp AGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACTGCACGGAGGAGGCTaGACTGTGACCATAAACTGT +
Preference number: 4 (lower is better)
Translates to: SGEIETVSDCAEATHCLQLHGGG*TVTINC
Trigger: ACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAG...TTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp ATGAAAGGTGTTGGGGACAAGCCTTCATGGGCTCCTAATCGACTGTCATTCAAGGGGAAAACATCGCACTaGAGTCCAGTAGGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: MKGVGDKPSWAPNRLSFKGKTSH*SPVGRS
Trigger: TGAGCGACCTACTGGACTTCAGTGCGATGTTTTCCC...CTTGAATGACAGTCGATTAGGAGCCCATGAAGGCTTGTCCCCAACACCTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561152.1
CDS-3UTR TCA 90 bp ACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCACTCAAGCGGTCATGTaGATGAAGGTTGCCATAACT +
Preference number: 4 (lower is better)
Translates to: TVSGEIETVSDCAEATHCTQAVM*MKVAIT
Trigger: AGTTATGGCAACCTTCATTCACATGACCGCTTGAGT...GCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CTGACAAGTACTGGTTTAATGCTAATCTGGCTCATCATTTTGGGACAGGGGCAGCTGGTACTGCCGCGATaGAAGCTGGACATTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LTSTGLMLIWLIILGQGQLVLPR*KLDIGG
Trigger: TCCACCAATGTCCAGCTTTCATCGCGGCAGTACCAG...CTGCCCCTGTCCCAAAATGATGAGCCAGATTAGCATTAAACCAGTACTTGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CAATGGTTGTCACTGCTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCTGGTACTGCCGCGATaGAAGCTGGACATTGGTGGA +
Preference number: 4 (lower is better)
Translates to: QWLSLLCSLHVNRFNVCWLVLPR*KLDIGG
Trigger: TCCACCAATGTCCAGCTTTCATCGCGGCAGTACCAG...CCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAGCAGTGACAACCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCTGCTGTCTGATCCATTaGTGGGAGGAGTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: HVNRFNVCWHQLSVDQLSCCLIH*WEECVR
Trigger: CCTCACACACTCCTCCCATCAATGGATCAGACAGCA...GGAAAGCTGATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGTGCATCACCTGTCTGTaGGCTTCCAGCAGCATTCCC +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLCITCL*ASSSIP
Trigger: GGGAATGCTGCTGGAAGCTCACAGACAGGTGATGCA...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR TCA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGCCAGGTCTTGGCCACTaGCTGGTACCTGTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEEPGLGH*LVPVRG
Trigger: ACCTCTCACAGGTACCAGTCAGTGGCCAAGACCTGG...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR TCA 90 bp CTTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTTCATAGCTTGGGGATaGAGGTGCTTGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LLPPVRFVSSDNLSCPSPFIAWG*RCLPSR
Trigger: CCTGGAGGGCAAGCACCTTCATCCCCAAGCTATGAA...AGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGTTCATAGCTTGGGGATaGAGGTGCTTGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLFIAWG*RCLPSR
Trigger: CCTGGAGGGCAAGCACCTTCATCCCCAAGCTATGAA...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CTGACAAGTACTGGTTTAATGCTAATCTGGCTCATCATTTTGGGACAGGGGCAGTTCATAGCTTGGGGATaGAGGTGCTTGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LTSTGLMLIWLIILGQGQFIAWG*RCLPSR
Trigger: CCTGGAGGGCAAGCACCTTCATCCCCAAGCTATGAA...CTGCCCCTGTCCCAAAATGATGAGCCAGATTAGCATTAAACCAGTACTTGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp ACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGTCCAAGTCCTTATaGGGAGAGGTCACCTTCTAT +
Preference number: 4 (lower is better)
Translates to: TVSGEIETVSDCAEATHCLSKSL*GEVTFY
Trigger: ATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAA...GCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGAGGCAACTTCCACGGTaGGTGGAGAGATCGAGACAG +
Preference number: 4 (lower is better)
Translates to: VLMRRGHLLSSLLITLELRQLPR*VERSRQ
Trigger: CTGTCTCGATCTCTCCACTCACCGTGGAAGTTGCCT...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR GCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGCGGCCATGCGTTGTTaGTGGGGATTCATCTTCGGC +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYEAAMRC*WGFIFG
Trigger: GCCGAAGATGAATCCCCAGCAACAACGCATGGCCGC...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp CAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAGCGGCCATGCGTTGTTaGTGGGGATTCATCTTCGGC +
Preference number: 4 (lower is better)
Translates to: QSLIVQKRHTACNKRFVAAAMRC*WGFIFG
Trigger: GCCGAAGATGAATCCCCAGCAACAACGCATGGCCGC...TGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp CACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCCAAGGGATCAAGCGCTaGAGAGTCATGGAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: HVNRFNVCWHQLSVDQLSQGIKR*RVMEWS
Trigger: AGACCACTCCATGACTCTGCAGCGCTTGATCCCTTG...GGAAAGCTGATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp CACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCGTGAACTGCTGGTACTaGCGCGATGAAAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: HVNRFNVCWHQLSVDQLSVNCWY*RDESWT
Trigger: TGTCCAGCTTTCATCGCGGCAGTACCAGCAGTTCAC...GGAAAGCTGATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp AGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAACGTAAGGTGAACTaGTGGTACTGCCGCGATGAA +
Preference number: 4 (lower is better)
Translates to: SGEIETVSDCAEATHCLQQRKVN*WYCRDE
Trigger: TTCATCGCGGCAGTACCAGCAGTTCACCTTACGTTG...TTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp TGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCACATTAACTTTTTCCCTGGGGATGAAGGTGCTTaGCCTCCAGGTCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: CMLASAECRSAFHINFFPGDEGA*PPGLGH
Trigger: GTGGCCAAGACCTGGAGGGCAAGCACCTTCATCCCC...AGGGAAAAAGTTAATGTGGAAAGCTGATCTACACTCAGCTGATGCCAGCATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR GCA 90 bp CTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCTGTGGTTGGCGGCTCTaGCGATACGGCAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: LIGMPGMLRANGCHCFVLCGWRL*RYGRNF
Trigger: AAAGTTTCTGCCGTATCGGCAGAGCCGCCAACCACA...GAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATACCTATTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTTACGAGCTCTCGGGTCTaGGAGGGGGAGGCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: LLMEVLTSCFDRRITFEFTSSRV*EGEAAF
Trigger: GAAAGCCGCCTCCCCCTCCCAGACCCGAGAGCTCGT...AAACTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
CDS-3UTR CCA 90 bp ATGAAAGGTGTTGGGGACAAGCCTTCATGGGCTCCTAATCGACTGTCATTCAAGGGGGACAAGCCTTCATaGGCTCCTAATCGACTGTCA +
Preference number: 4 (lower is better)
Translates to: MKGVGDKPSWAPNRLSFKGDKPS*APNRLS
Trigger: TGACAGTCGATTAGGAGCCCATGAAGGCTTGTCCCC...CTTGAATGACAGTCGATTAGGAGCCCATGAAGGCTTGTCCCCAACACCTTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561152.1
CDS-3UTR CCA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGTTGCCCTCCAGGTCTTaGCCACTGACTGGTACCTGT +
Preference number: 4 (lower is better)
Translates to: VLMRRGHLLSSLLITLELLPSRS*PLTGTC
Trigger: ACAGGTACCAGTCAGTGGCCAAGACCTGGAGGGCAA...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CCA 90 bp CACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCGAAGGTCCCACAGCATaGTTCCGCAGCACATGGATT +
Preference number: 4 (lower is better)
Translates to: HVNRFNVCWHQLSVDQLSEGPTA*FRSTWI
Trigger: AATCCATGTGCTGCGGAACCATGCTGTGGGACCTTC...GGAAAGCTGATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp CTTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTCAGCAGGCAAACTGGTaGAAGGTCCCACAGCATGGT +
Preference number: 4 (lower is better)
Translates to: LLPPVRFVSSDNLSCPSPQQANW*KVPQHG
Trigger: ACCATGCTGTGGGACCTTCCACCAGTTTGCCTGCTG...AGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGCAGCAGGCAAACTGGTaGAAGGTCCCACAGCATGGT +
Preference number: 4 (lower is better)
Translates to: VLMRRGHLLSSLLITLELQQANW*KVPQHG
Trigger: ACCATGCTGTGGGACCTTCCACCAGTTTGCCTGCTG...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGACCAGCAGGCAAACTaGTGGAAGGTCCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLDQQAN*WKVPQH
Trigger: ATGCTGTGGGACCTTCCACCAGTTTGCCTGCTGGTC...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CTTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTGACCAGCAGGCAAACTaGTGGAAGGTCCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: LLPPVRFVSSDNLSCPSPDQQAN*WKVPQH
Trigger: ATGCTGTGGGACCTTCCACCAGTTTGCCTGCTGGTC...AGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGGACCAGCAGGCAAACTaGTGGAAGGTCCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: VLMRRGHLLSSLLITLELDQQAN*WKVPQH
Trigger: ATGCTGTGGGACCTTCCACCAGTTTGCCTGCTGGTC...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGGTGAGTGGAGAGATCGACCAGCAGGCAAACTaGTGGAAGGTCCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: HLSIQFRHKATSTVSGEIDQQAN*WKVPQH
Trigger: ATGCTGTGGGACCTTCCACCAGTTTGCCTGCTGGTC...GATCTCTCCACTCACCGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp CTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGACCAGCAGGCAAACTaGTGGAAGGTCCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: LCSLHVNRFNVCWHQLSVDQQAN*WKVPQH
Trigger: ATGCTGTGGGACCTTCCACCAGTTTGCCTGCTGGTC...TACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp TCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAAACATTCCTGGCAGTGTGGTTaGCGGCTCTGCCGATACGGC +
Preference number: 4 (lower is better)
Translates to: SDCAEATHCLQQKICCKHSWQCG*RLCRYG
Trigger: GCCGTATCGGCAGAGCCGCCAACCACACTGCCAGGA...ATGTTTGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTGGGTTCCTGGCAGTGTaGTTGGCGGCTCTGCCGATA +
Preference number: 4 (lower is better)
Translates to: LSDELPIFTSDGSVDQLLGFLAV*LAALPI
Trigger: TATCGGCAGAGCCGCCAACCACACTGCCAGGAACCC...AAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp GTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTGGGTTCCTGGCAGTGTaGTTGGCGGCTCTGCCGATA +
Preference number: 4 (lower is better)
Translates to: VANISWADVLSDELPIFTGFLAV*LAALPI
Trigger: TATCGGCAGAGCCGCCAACCACACTGCCAGGAACCC...AGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CCCTTCCTTTTTAAGACACTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTGGGAAAACATCGCACTaGAGTCCAGTAGGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: PFLFKTLIGMPGMLRANGGKTSH*SPVGRS
Trigger: TGAGCGACCTACTGGACTTCAGTGCGATGTTTTCCC...ACCATTGGCCCTTAGCATTCCCGGCATACCTATTAGTGTCTTAAAAAGGAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGGGAAAACATCGCACTaGAGTCCAGTAGGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLGKTSH*SPVGRS
Trigger: TGAGCGACCTACTGGACTTCAGTGCGATGTTTTCCC...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGGTGAGTGGAGAGATCGGGAAAACATCGCACTaGAGTCCAGTAGGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: HLSIQFRHKATSTVSGEIGKTSH*SPVGRS
Trigger: TGAGCGACCTACTGGACTTCAGTGCGATGTTTTCCC...GATCTCTCCACTCACCGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp AGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAATACCTGATCCACTaGATTGACTGCTTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SGEIETVSDCAEATHCLQQYLIH*IDCFPV
Trigger: CACTGGGAAGCAGTCAATTCAGTGGATCAGGTATTG...TTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGTACTGCCGCGATaGAAGCTGGACATTGGTGGA +
Preference number: 4 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITLVLPR*KLDIGG
Trigger: TCCACCAATGTCCAGCTTTCATCGCGGCAGTACCAG...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR TCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGCTGGTACTGCCGCGATaGAAGCTGGACATTGGTGGA +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYELVLPR*KLDIGG
Trigger: TCCACCAATGTCCAGCTTTCATCGCGGCAGTACCAG...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR TCA 90 bp CAATGGTTGTCACTGCTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGTGCTGTCTGATCCATTaGTGGGAGGAGTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: QWLSLLCSLHVNRFNVCWCCLIH*WEECVR
Trigger: CCTCACACACTCCTCCCATCAATGGATCAGACAGCA...CCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAGCAGTGACAACCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGTGCTGTCTGATCCATTaGTGGGAGGAGTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: VLMRRGHLLSSLLITLELCCLIH*WEECVR
Trigger: CCTCACACACTCCTCCCATCAATGGATCAGACAGCA...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR TCA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTTGCATCACCTGTCTGTaGGCTTCCAGCAGCATTCCC +
Preference number: 4 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITCITCL*ASSSIP
Trigger: GGGAATGCTGCTGGAAGCTCACAGACAGGTGATGCA...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR TCA 90 bp CTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCACTGACTGGTACCTGTaGGAGGTGAAGGTGATCCAA +
Preference number: 4 (lower is better)
Translates to: LIGMPGMLRANGCHCFVLTDWYL*EVKVIQ
Trigger: TTGGATCACCTTCACCTCTCACAGGTACCAGTCAGT...GAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATACCTATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGCCAGGTCTTGGCCACTaGCTGGTACCTGTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: DVLSDELPIFTSDGSVDQPGLGH*LVPVRG
Trigger: ACCTCTCACAGGTACCAGTCAGTGGCCAAGACCTGG...CTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTTTCATAGCTTGGGGATaGAGGTGCTTGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITFIAWG*RCLPSR
Trigger: CCTGGAGGGCAAGCACCTTCATCCCCAAGCTATGAA...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp TCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTTTCATAGCTTGGGGATaGAGGTGCTTGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SRQSLIVQKRHTACNKRFFIAWG*RCLPSR
Trigger: CCTGGAGGGCAAGCACCTTCATCCCCAAGCTATGAA...AAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTCATAGCTTGGGGATaGAGGTGCTTGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: HGLMFYLMSFLSSLLMEVFIAWG*RCLPSR
Trigger: CCTGGAGGGCAAGCACCTTCATCCCCAAGCTATGAA...CACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CTTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTCTGCAGGGAGTGGAGTaGGTTTTCATAGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: LLPPVRFVSSDNLSCPSPLQGVE*VFIAWG
Trigger: TCCCCAAGCTATGAAAACTCACTCCACTCCCTGCAG...AGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000343827.7
ENST00000537840.5
ENST00000557843.5
ENST00000559710.5
CDS-3UTR TCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGCTGCAGGGAGTGGAGTaGGTTTTCATAGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLLQGVE*VFIAWG
Trigger: TCCCCAAGCTATGAAAACTCACTCCACTCCCTGCAG...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000343827.7
ENST00000537840.5
ENST00000557843.5
ENST00000559710.5
CDS-3UTR TCA 90 bp AGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACTATGTATATCACTGTaGCCAGCAGGCAAACTGGTG +
Preference number: 4 (lower is better)
Translates to: SGEIETVSDCAEATHCLQLCISL*PAGKLV
Trigger: CACCAGTTTGCCTGCTGGTCACAGTGATATACATAG...TTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp TATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCTGCACGTGCTAGACAGGACTGAATaGTTGCCATTGAGACTGACA +
Preference number: 4 (lower is better)
Translates to: YAGNAKGQWLSLLCSLHVLDRTE*LPLRLT
Trigger: TGTCAGTCTCAATGGCAATCATTCAGTCCTGTCTAG...CACGTGCAGAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAAGGCAACTTCCACGGTaGGTGGAGAGATCGAGACAG +
Preference number: 4 (lower is better)
Translates to: QSLIVQKRHTACNKRFVARQLPR*VERSRQ
Trigger: CTGTCTCGATCTCTCCACTCACCGTGGAAGTTGCCT...TGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR TCA 90 bp ACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTTGTTCTCTGCACGTaGACCGCTTTAATGTATGCT +
Preference number: 4 (lower is better)
Translates to: TVSGEIETVSDCAEATHCFVLCT*TALMYA
Trigger: AGCATACATTAAAGCGGTTCACGTGCAGAGAACAAA...GCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR TCA 90 bp AGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAAAGCCTGATTCTGTCCTaGAGGGTTTCCCAGATAATG +
Preference number: 4 (lower is better)
Translates to: SGEIETVSDCAEATHCLQSLILS*RVSQIM
Trigger: CATTATCTGGGAAACCCTTCAGGACAGAATCAGGCT...TTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR GCA 90 bp CTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATGCGGCCATGCGTTGTTaGTGGGGATTCATCTTCGGC +
Preference number: 4 (lower is better)
Translates to: LMSFLSSLLMEVLTSCFDAAMRC*WGFIFG
Trigger: GCCGAAGATGAATCCCCAGCAACAACGCATGGCCGC...ATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp AGGCTATGGTCACAGATGGTCTCTGCTTACCACTGTAAGGTAAATGTGCAAAGCCAAGGGATCAAGCGCTaGAGAGTCATGGAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: RLWSQMVSAYHCKVNVQSQGIKR*RVMEWS
Trigger: AGACCACTCCATGACTCTGCAGCGCTTGATCCCTTG...GCTTTGCACATTTACCTTACAGTGGTAAGCAGAGACCATCTGTGACCATAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGTGAACTGCTGGTACTaGCGCGATGAAAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLVNCWY*RDESWT
Trigger: TGTCCAGCTTTCATCGCGGCAGTACCAGCAGTTCAC...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR GCA 90 bp CTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCCAACGTAAGGTGAACTaGTGGTACTGCCGCGATGAA +
Preference number: 4 (lower is better)
Translates to: LIGMPGMLRANGCHCFVLQRKVN*WYCRDE
Trigger: TTCATCGCGGCAGTACCAGCAGTTCACCTTACGTTG...GAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATACCTATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp CACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCCAACGTAAGGTGAACTaGTGGTACTGCCGCGATGAA +
Preference number: 4 (lower is better)
Translates to: HVNRFNVCWHQLSVDQLSQRKVN*WYCRDE
Trigger: TTCATCGCGGCAGTACCAGCAGTTCACCTTACGTTG...GGAAAGCTGATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp CTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTATGTGGTTGGCGGCTCTaGCGATACGGCAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: LCSLHVNRFNVCWHQLSVCGWRL*RYGRNF
Trigger: AAAGTTTCTGCCGTATCGGCAGAGCCGCCAACCACA...TACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR GCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGTGTGGTTGGCGGCTCTaGCGATACGGCAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLCGWRL*RYGRNF
Trigger: AAAGTTTCTGCCGTATCGGCAGAGCCGCCAACCACA...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp ACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCAACCGCTTTAATGTATaGTGGCATCAGCTGAGTGTA +
Preference number: 4 (lower is better)
Translates to: TVSGEIETVSDCAEATHCNRFNV*WHQLSV
Trigger: TACACTCAGCTGATGCCAGCATACATTAAAGCGGTT...GCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp TCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGCCATGCGTTGTTGCTaGGGATTCATCTTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: SRQSLIVQKRHTACNKRFAMRCC*GFIFGH
Trigger: GTGGCCGAAGATGAATCCCCAGCAACAACGCATGGC...AAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCTGCACGTGCCCACTATTAACAGGTaGGGAAAACATCGCACTGAA +
Preference number: 4 (lower is better)
Translates to: YAGNAKGQWLSLLCSLHVPTINR*GKHRTE
Trigger: TTCAGTGCGATGTTTTCCCCACCTGTTAATAGTGGG...CACGTGCAGAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CAATGGTTGTCACTGCTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGGGGGACAAGCCTTCATaGGCTCCTAATCGACTGTCA +
Preference number: 4 (lower is better)
Translates to: QWLSLLCSLHVNRFNVCWGDKPS*APNRLS
Trigger: TGACAGTCGATTAGGAGCCCATGAAGGCTTGTCCCC...CCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAGCAGTGACAACCATTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTGACAAGTACTGGTTTAATGCTAATCTGGCTCATCATTTTGGGACAGGGGCAGGGGGACAAGCCTTCATaGGCTCCTAATCGACTGTCA +
Preference number: 4 (lower is better)
Translates to: LTSTGLMLIWLIILGQGQGDKPS*APNRLS
Trigger: TGACAGTCGATTAGGAGCCCATGAAGGCTTGTCCCC...CTGCCCCTGTCCCAAAATGATGAGCCAGATTAGCATTAAACCAGTACTTGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGGTGAGTGGAGAGATCGGGGACAAGCCTTCATaGGCTCCTAATCGACTGTCA +
Preference number: 4 (lower is better)
Translates to: HLSIQFRHKATSTVSGEIGDKPS*APNRLS
Trigger: TGACAGTCGATTAGGAGCCCATGAAGGCTTGTCCCC...GATCTCTCCACTCACCGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp GCTGCACGGAGGAGGCTGGACTGTGACCATAAACTGTTCAGATTTAGAGATCAAGTTCATGAAAGGTGTTaGGGACAAGCCTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: AARRRLDCDHKLFRFRDQVHERC*GQAFMG
Trigger: GCCCATGAAGGCTTGTCCCCAACACCTTTCATGAAC...TTGATCTCTAAATCTGAACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp ATGAAAGGTGTTGGGGACAAGCCTTCATGGGCTCCTAATCGACTGTCATTCAAGGTTCATGAAAGGTGTTaGGGACAAGCCTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: MKGVGDKPSWAPNRLSFKVHERC*GQAFMG
Trigger: GCCCATGAAGGCTTGTCCCCAACACCTTTCATGAAC...CTTGAATGACAGTCGATTAGGAGCCCATGAAGGCTTGTCCCCAACACCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561152.1
CDS-3UTR CCA 90 bp GCTGCACGGAGGAGGCTGGACTGTGACCATAAACTGTTCAGATTTAGAGATCAATGCAGAGTCATGGAGTaGTCTCCTCCTGGAACTTGT +
Preference number: 4 (lower is better)
Translates to: AARRRLDCDHKLFRFRDQCRVME*SPPGTC
Trigger: ACAAGTTCCAGGAGGAGACCACTCCATGACTCTGCA...TTGATCTCTAAATCTGAACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAGCGCTGCAGAGTCATaGAGTGGTCTCCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: TVSDCAEATHCLQQKICCSAAES*SGLLLE
Trigger: TTCCAGGAGGAGACCACTCCATGACTCTGCAGCGCT...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGAGCGCTGCAGAGTCATaGAGTGGTCTCCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: HGLMFYLMSFLSSLLMEVSAAES*SGLLLE
Trigger: TTCCAGGAGGAGACCACTCCATGACTCTGCAGCGCT...CACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CCCTTCCTTTTTAAGACACTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTGAGACATGTGGGAAGTaGAGGTCCCCAGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: PFLFKTLIGMPGMLRANGETCGK*RSPEFH
Trigger: GTGGAATTCTGGGGACCTCCACTTCCCACATGTCTC...ACCATTGGCCCTTAGCATTCCCGGCATACCTATTAGTGTCTTAAAAAGGAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGGAGACATGTGGGAAGTaGAGGTCCCCAGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: VLMRRGHLLSSLLITLELETCGK*RSPEFH
Trigger: GTGGAATTCTGGGGACCTCCACTTCCCACATGTCTC...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CCA 90 bp TGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATGAGACATGTGGGAAGTaGAGGTCCCCAGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: CSLHVNRFNVCWHQLSVDETCGK*RSPEFH
Trigger: GTGGAATTCTGGGGACCTCCACTTCCCACATGTCTC...ATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCTGCACGTGGGTTGCCATAACTACTaGATTGAGACATGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: YAGNAKGQWLSLLCSLHVGCHNY*IETCGK
Trigger: CTTCCCACATGTCTCAATCCAGTAGTTATGGCAACC...CACGTGCAGAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CAATGGTTGTCACTGCTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGTGCCGCGATGAAAGCTaGACATTGGTGGAAGACTCG +
Preference number: 4 (lower is better)
Translates to: QWLSLLCSLHVNRFNVCWCRDES*TLVEDS
Trigger: CGAGTCTTCCACCAATGTCCAGCTTTCATCGCGGCA...CCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAGCAGTGACAACCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGTGCCGCGATGAAAGCTaGACATTGGTGGAAGACTCG +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLCRDES*TLVEDS
Trigger: CGAGTCTTCCACCAATGTCCAGCTTTCATCGCGGCA...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CCA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGCGTAAGGTGAACTGCTaGTACTGCCGCGATGAAAGC +
Preference number: 4 (lower is better)
Translates to: VLMRRGHLLSSLLITLELRKVNC*YCRDES
Trigger: GCTTTCATCGCGGCAGTACCAGCAGTTCACCTTACG...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CCA 90 bp CATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGCCCTCCAGGTCTTaGCCACTGACTGGTACCTGT +
Preference number: 4 (lower is better)
Translates to: HGLMFYLMSFLSSLLMEVLPSRS*PLTGTC
Trigger: ACAGGTACCAGTCAGTGGCCAAGACCTGGAGGGCAA...CACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTTTGCCCTCCAGGTCTTaGCCACTGACTGGTACCTGT +
Preference number: 4 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITLPSRS*PLTGTC
Trigger: ACAGGTACCAGTCAGTGGCCAAGACCTGGAGGGCAA...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CCA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGGTGAGTGGAGAGATCGAAGGTCCCACAGCATaGTTCCGCAGCACATGGATT +
Preference number: 4 (lower is better)
Translates to: HLSIQFRHKATSTVSGEIEGPTA*FRSTWI
Trigger: AATCCATGTGCTGCGGAACCATGCTGTGGGACCTTC...GATCTCTCCACTCACCGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp TGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATGAAGGTCCCACAGCATaGTTCCGCAGCACATGGATT +
Preference number: 4 (lower is better)
Translates to: CSLHVNRFNVCWHQLSVDEGPTA*FRSTWI
Trigger: AATCCATGTGCTGCGGAACCATGCTGTGGGACCTTC...ATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp CTTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTGAAGGTCCCACAGCATaGTTCCGCAGCACATGGATT +
Preference number: 4 (lower is better)
Translates to: LLPPVRFVSSDNLSCPSPEGPTA*FRSTWI
Trigger: AATCCATGTGCTGCGGAACCATGCTGTGGGACCTTC...AGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGCAGCAGGCAAACTGGTaGAAGGTCCCACAGCATGGT +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYEQQANW*KVPQHG
Trigger: ACCATGCTGTGGGACCTTCCACCAGTTTGCCTGCTG...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATCAGCAGGCAAACTGGTaGAAGGTCCCACAGCATGGT +
Preference number: 4 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYQQANW*KVPQHG
Trigger: ACCATGCTGTGGGACCTTCCACCAGTTTGCCTGCTG...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGCAGCAGGCAAACTGGTaGAAGGTCCCACAGCATGGT +
Preference number: 4 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEEQQANW*KVPQHG
Trigger: ACCATGCTGTGGGACCTTCCACCAGTTTGCCTGCTG...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGACCAGCAGGCAAACTaGTGGAAGGTCCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYDQQAN*WKVPQH
Trigger: ATGCTGTGGGACCTTCCACCAGTTTGCCTGCTGGTC...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTTTCCTGGCAGTGTGGTTaGCGGCTCTGCCGATACGGC +
Preference number: 4 (lower is better)
Translates to: LLMEVLTSCFDRRITFEFSWQCG*RLCRYG
Trigger: GCCGTATCGGCAGAGCCGCCAACCACACTGCCAGGA...AAACTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp TTTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCGGGTTCCTGGCAGTGTaGTTGGCGGCTCTGCCGATA +
Preference number: 4 (lower is better)
Translates to: FVANISWADVLSDELPIFGFLAV*LAALPI
Trigger: TATCGGCAGAGCCGCCAACCACACTGCCAGGAACCC...GAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp GAAGATGGAGGAGGAATGGGATTCATTCTTCCAGACAATACGTGTAAGTTTACTGGGTTCCTGGCAGTGTaGTTGGCGGCTCTGCCGATA +
Preference number: 4 (lower is better)
Translates to: EDGGGMGFILPDNTCKFTGFLAV*LAALPI
Trigger: TATCGGCAGAGCCGCCAACCACACTGCCAGGAACCC...AGTAAACTTACACGTATTGTCTGGAAGAATGAATCCCATTCCTCCTCCATCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560948.1
CDS-3UTR CCA 90 bp AAGGAATTATTAAGCCAAGATACCTCCTTTAGCATGTTTTTCTCTCCCAGGGTTCCCAGGATGGGTTCCTaGCAGTGTGGTTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: KELLSQDTSFSMFFSPRVPRMGS*QCGWRL
Trigger: GAGCCGCCAACCACACTGCCAGGAACCCATCCTGGG...AACCCTGGGAGAGAAAAACATGCTAAAGGAGGTATCTTGGCTTAATAATTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGGTGAGTGGAGAGATCTCACTAAGCCCAGGATaGGTTCCTGGCAGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: HLSIQFRHKATSTVSGEISLSPG*VPGSVV
Trigger: AACCACACTGCCAGGAACCCATCCTGGGCTTAGTGA...GATCTCTCCACTCACCGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp CTTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTCACTAAGCCCAGGATaGGTTCCTGGCAGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: LLPPVRFVSSDNLSCPSPSLSPG*VPGSVV
Trigger: AACCACACTGCCAGGAACCCATCCTGGGCTTAGTGA...AGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp ACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCAAAACGCTATTCATATaGCAAGAGGATAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: TVSGEIETVSDCAEATHCKTLFI*QEDRRG
Trigger: CCCTCTCCTATCCTCTTGCCATATGAATAGCGTTTT...GCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGCTGCACGGAGGAGGCTaGACTGTGACCATAAACTGT +
Preference number: 4 (lower is better)
Translates to: VLMRRGHLLSSLLITLELLHGGG*TVTINC
Trigger: ACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAG...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCCTCCCAGGGTTGTTGTaGTGGAAGACAGGTTTCATG +
Preference number: 4 (lower is better)
Translates to: LIGMPGMLRANGCHCFVLLPGLL*WKTGFM
Trigger: CATGAAACCTGTCTTCCACCACAACAACCCTGGGAG...GAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATACCTATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
3UTR CAA 72 bp ACTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTaGTCACTGCTTTGTTCTCTGCACGTGAACCGCTTT +
Preference number: 4 (lower is better)
Translates to: TNRYAGNAKGQW*SLLCSLHVNRF
Trigger: AAAGCGGTTCACGTGCAGAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATACCTATTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp ATGAAAGGTGTTGGGGACAAGCCTTCATGGGCTCCTAATCGACTGTCATTCAAGCCTGATCCACTGAATTaGCTGCTTCCCAGTGTAGTT +
Preference number: 4 (lower is better)
Translates to: MKGVGDKPSWAPNRLSFKPDPLN*LLPSVV
Trigger: AACTACACTGGGAAGCAGTCAATTCAGTGGATCAGG...CTTGAATGACAGTCGATTAGGAGCCCATGAAGGCTTGTCCCCAACACCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561152.1
CDS-3UTR TCA 90 bp ACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTCTTTCATCAATACCTaGTCCACTGAATTGACTGCT +
Preference number: 4 (lower is better)
Translates to: TVSGEIETVSDCAEATHCSFINT*STELTA
Trigger: AGCAGTCAATTCAGTGGATCAGGTATTGATGAAAGA...GCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCCTGGTACTGCCGCGATaGAAGCTGGACATTGGTGGA +
Preference number: 4 (lower is better)
Translates to: FYLMSFLSSLLMEVLTSCLVLPR*KLDIGG
Trigger: TCCACCAATGTCCAGCTTTCATCGCGGCAGTACCAG...GCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp ATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGTCTTGTGGCAGCAACGTAAGGTaGACTGCTGGTACTGCCGCG +
Preference number: 4 (lower is better)
Translates to: MTDLLGIILIRVPEVLSCGSNVR*TAGTAA
Trigger: CGCGGCAGTACCAGCAGTTCACCTTACGTTGCTGCC...ACAAGACAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGTGCTGTCTGATCCATTaGTGGGAGGAGTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEECCLIH*WEECVR
Trigger: CCTCACACACTCCTCCCATCAATGGATCAGACAGCA...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR TCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGTGCTGTCTGATCCATTaGTGGGAGGAGTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYECCLIH*WEECVR
Trigger: CCTCACACACTCCTCCCATCAATGGATCAGACAGCA...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR TCA 90 bp CTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATTGCATCACCTGTCTGTaGGCTTCCAGCAGCATTCCC +
Preference number: 4 (lower is better)
Translates to: LMSFLSSLLMEVLTSCFDCITCL*ASSSIP
Trigger: GGGAATGCTGCTGGAAGCTCACAGACAGGTGATGCA...ATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTGCATCACCTGTCTGTaGGCTTCCAGCAGCATTCCC +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSICITCL*ASSSIP
Trigger: GGGAATGCTGCTGGAAGCTCACAGACAGGTGATGCA...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR TCA 90 bp TGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATACTGACTGGTACCTGTaGGAGGTGAAGGTGATCCAA +
Preference number: 4 (lower is better)
Translates to: CSLHVNRFNVCWHQLSVDTDWYL*EVKVIQ
Trigger: TTGGATCACCTTCACCTCTCACAGGTACCAGTCAGT...ATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CCCTTCCTTTTTAAGACACTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTACTGACTGGTACCTGTaGGAGGTGAAGGTGATCCAA +
Preference number: 4 (lower is better)
Translates to: PFLFKTLIGMPGMLRANGTDWYL*EVKVIQ
Trigger: TTGGATCACCTTCACCTCTCACAGGTACCAGTCAGT...ACCATTGGCCCTTAGCATTCCCGGCATACCTATTAGTGTCTTAAAAAGGAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGACTGACTGGTACCTGTaGGAGGTGAAGGTGATCCAA +
Preference number: 4 (lower is better)
Translates to: VLMRRGHLLSSLLITLELTDWYL*EVKVIQ
Trigger: TTGGATCACCTTCACCTCTCACAGGTACCAGTCAGT...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR TCA 90 bp TTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACCAGGTCTTGGCCACTaGCTGGTACCTGTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: LLQTSHGLMFYLMSFLSSPGLGH*LVPVRG
Trigger: ACCTCTCACAGGTACCAGTCAGTGGCCAAGACCTGG...TGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGCTGCAGGGAGTGGAGTaGGTTTTCATAGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEELQGVE*VFIAWG
Trigger: TCCCCAAGCTATGAAAACTCACTCCACTCCCTGCAG...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000343827.7
ENST00000537840.5
ENST00000557843.5
ENST00000559710.5
CDS-3UTR TCA 90 bp CTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCACAACAGTTCCAGACTaGCTTTGCAAGCCACCTCTA +
Preference number: 4 (lower is better)
Translates to: LIGMPGMLRANGCHCFVLTTVPD*LCKPPL
Trigger: TAGAGGTGGCTTGCAAAGTCAGTCTGGAACTGTTGT...GAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATACCTATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGAGGCAACTTCCACGGTaGGTGGAGAGATCGAGACAG +
Preference number: 4 (lower is better)
Translates to: DVLSDELPIFTSDGSVDQRQLPR*VERSRQ
Trigger: CTGTCTCGATCTCTCCACTCACCGTGGAAGTTGCCT...CTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR TCA 90 bp GCTGCACGGAGGAGGCTGGACTGTGACCATAAACTGTTCAGATTTAGAGATCAACACTACCTGCCTTGGTaGCTACTGGGTTTTGTTATG +
Preference number: 4 (lower is better)
Translates to: AARRRLDCDHKLFRFRDQHYLPW*LLGFVM
Trigger: CATAACAAAACCCAGTAGTCACCAAGGCAGGTAGTG...TTGATCTCTAAATCTGAACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp ACTTCCACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACAATAAGGAAATACGGGTaGCCATTGCTCTTGTATTCC +
Preference number: 4 (lower is better)
Translates to: TSTVSGEIETVSDCAEATIRKYG*PLLLYS
Trigger: GGAATACAAGAGCAATGGTCACCCGTATTTCCTTAT...TGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGTGGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCTTAGCTCCACAAGCCTaGTTCTGTCCTGAAGGGTTT +
Preference number: 4 (lower is better)
Translates to: HVNRFNVCWHQLSVDQLSLAPQA*FCPEGF
Trigger: AAACCCTTCAGGACAGAATCAGGCTTGTGGAGCTAA...GGAAAGCTGATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR TCA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGCCACTGACTGGTACTTaGGTTGGAAGACATGAGTCC +
Preference number: 4 (lower is better)
Translates to: VLMRRGHLLSSLLITLELPLTGT*VGRHES
Trigger: GGACTCATGTCTTCCAACTCAAGTACCAGTCAGTGG...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp TCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTCCAGGTCTTGGCCACTaGCTGGTACTTGAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: SRQSLIVQKRHTACNKRFPGLGH*LVLELE
Trigger: TTCCAACTCAAGTACCAGTCAGTGGCCAAGACCTGG...AAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp ATGAAAGGTGTTGGGGACAAGCCTTCATGGGCTCCTAATCGACTGTCATTCAAGAAAACCCTGATCCACTaGATTGACTGCTTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: MKGVGDKPSWAPNRLSFKKTLIH*IDCFPV
Trigger: CACTGGGAAGCAGTCAATTCAGTGGATCAGGGTTTT...CTTGAATGACAGTCGATTAGGAGCCCATGAAGGCTTGTCCCCAACACCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561152.1
CDS-3UTR GCA 90 bp TCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGGCGGCCATGCGTTGTTaGTGGGGATTCATCTTCGGC +
Preference number: 4 (lower is better)
Translates to: SLLMEVLTSCFDRRITFEAAMRC*WGFIFG
Trigger: GCCGAAGATGAATCCCCAGCAACAACGCATGGCCGC...CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGTGAACTGCTGGTACTaGCGCGATGAAAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYEVNCWY*RDESWT
Trigger: TGTCCAGCTTTCATCGCGGCAGTACCAGCAGTTCAC...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR GCA 90 bp TGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATCAACGTAAGGTGAACTaGTGGTACTGCCGCGATGAA +
Preference number: 4 (lower is better)
Translates to: CSLHVNRFNVCWHQLSVDQRKVN*WYCRDE
Trigger: TTCATCGCGGCAGTACCAGCAGTTCACCTTACGTTG...ATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp TCACAAATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGGGGGATGAAGGTGCTTaGCCTCCAGGTCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SQMTDLLGIILIRVPEVLGDEGA*PPGLGH
Trigger: GTGGCCAAGACCTGGAGGGCAAGCACCTTCATCCCC...CAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCATTTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp TATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCTGCACGTGGCCAAGCTCTTTGAATaGTTCATTAATATCCCGCAC +
Preference number: 4 (lower is better)
Translates to: YAGNAKGQWLSLLCSLHVAKLFE*FINIPH
Trigger: GTGCGGGATATTAATGAAGCATTCAAAGAGCTTGGC...CACGTGCAGAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp CATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTGTGGTTGGCGGCTCTaGCGATACGGCAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: HGLMFYLMSFLSSLLMEVCGWRL*RYGRNF
Trigger: AAAGTTTCTGCCGTATCGGCAGAGCCGCCAACCACA...CACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTTGTGGTTGGCGGCTCTaGCGATACGGCAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITCGWRL*RYGRNF
Trigger: AAAGTTTCTGCCGTATCGGCAGAGCCGCCAACCACA...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp GCTGCACGGAGGAGGCTGGACTGTGACCATAAACTGTTCAGATTTAGAGATCAAAGCTCTAGACCAGATTaGCAACTTAGCTCCACAAGC +
Preference number: 4 (lower is better)
Translates to: AARRRLDCDHKLFRFRDQSSRPD*QLSSTS
Trigger: GCTTGTGGAGCTAAGTTGGCAATCTGGTCTAGAGCT...TTGATCTCTAAATCTGAACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR CCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCGCCATGCGTTGTTGCTaGGGATTCATCTTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSIAMRCC*GFIFGH
Trigger: GTGGCCGAAGATGAATCCCCAGCAACAACGCATGGC...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATGCCATGCGTTGTTGCTaGGGATTCATCTTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: LMSFLSSLLMEVLTSCFDAMRCC*GFIFGH
Trigger: GTGGCCGAAGATGAATCCCCAGCAACAACGCATGGC...ATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGGTGAGTGGAGAGATCTGCAGAGTCATGGAGTaGTCTCCTCCTGGAACTTGT +
Preference number: 4 (lower is better)
Translates to: HLSIQFRHKATSTVSGEICRVME*SPPGTC
Trigger: ACAAGTTCCAGGAGGAGACCACTCCATGACTCTGCA...GATCTCTCCACTCACCGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCAGCGCTGCAGAGTCATaGAGTGGTCTCCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: FYLMSFLSSLLMEVLTSCSAAES*SGLLLE
Trigger: TTCCAGGAGGAGACCACTCCATGACTCTGCAGCGCT...GCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTAGCGCTGCAGAGTCATaGAGTGGTCTCCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LSDELPIFTSDGSVDQLLSAAES*SGLLLE
Trigger: TTCCAGGAGGAGACCACTCCATGACTCTGCAGCGCT...AAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGAGACATGTGGGAAGTaGAGGTCCCCAGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: SRQSLIVQKRHTACNKRFETCGK*RSPEFH
Trigger: GTGGAATTCTGGGGACCTCCACTTCCCACATGTCTC...AAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGTGCCGCGATGAAAGCTaGACATTGGTGGAAGACTCG +
Preference number: 4 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEECRDES*TLVEDS
Trigger: CGAGTCTTCCACCAATGTCCAGCTTTCATCGCGGCA...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGTGCCGCGATGAAAGCTaGACATTGGTGGAAGACTCG +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYECRDES*TLVEDS
Trigger: CGAGTCTTCCACCAATGTCCAGCTTTCATCGCGGCA...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CCA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCCGTAAGGTGAACTGCTaGTACTGCCGCGATGAAAGC +
Preference number: 4 (lower is better)
Translates to: TVSDCAEATHCLQQKICCRKVNC*YCRDES
Trigger: GCTTTCATCGCGGCAGTACCAGCAGTTCACCTTACG...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTCGTAAGGTGAACTGCTaGTACTGCCGCGATGAAAGC +
Preference number: 4 (lower is better)
Translates to: SRQSLIVQKRHTACNKRFRKVNC*YCRDES
Trigger: GCTTTCATCGCGGCAGTACCAGCAGTTCACCTTACG...AAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp AGGCTATGGTCACAGATGGTCTCTGCTTACCACTGTAAGGTAAATGTGCAAAGCCAGCAGCATTCCCTCTaGTTCCTAGAATGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: RLWSQMVSAYHCKVNVQSQQHSL*FLECCL
Trigger: CAGACAGCATTCTAGGAACCAGAGGGAATGCTGCTG...GCTTTGCACATTTACCTTACAGTGGTAAGCAGAGACCATCTGTGACCATAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTCAGCAGCATTCCCTCTaGTTCCTAGAATGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LLPPVRFVSSDNLSCPSPQQHSL*FLECCL
Trigger: CAGACAGCATTCTAGGAACCAGAGGGAATGCTGCTG...AGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
CDS-3UTR CCA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGGAAGGTCCCACAGCATaGTTCCGCAGCACATGGATT +
Preference number: 4 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEEEGPTA*FRSTWI
Trigger: AATCCATGTGCTGCGGAACCATGCTGTGGGACCTTC...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp TGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCACATTAACTTTTTCCCTCAGCAGGCAAACTGGTaGAAGGTCCCACAGCATGGT +
Preference number: 4 (lower is better)
Translates to: CMLASAECRSAFHINFFPQQANW*KVPQHG
Trigger: ACCATGCTGTGGGACCTTCCACCAGTTTGCCTGCTG...AGGGAAAAAGTTAATGTGGAAAGCTGATCTACACTCAGCTGATGCCAGCATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp CTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCAGCAGGCAAACTGGTaGAAGGTCCCACAGCATGGT +
Preference number: 4 (lower is better)
Translates to: LMSFLSSLLMEVLTSCFDQQANW*KVPQHG
Trigger: ACCATGCTGTGGGACCTTCCACCAGTTTGCCTGCTG...ATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp GATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGGACCAGCAGGCAAACTaGTGGAAGGTCCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: DVLSDELPIFTSDGSVDQDQQAN*WKVPQH
Trigger: ATGCTGTGGGACCTTCCACCAGTTTGCCTGCTGGTC...CTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTGACCAGCAGGCAAACTaGTGGAAGGTCCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: LSDELPIFTSDGSVDQLLDQQAN*WKVPQH
Trigger: ATGCTGTGGGACCTTCCACCAGTTTGCCTGCTGGTC...AAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTCACTAAGCCCAGGATaGGTTCCTGGCAGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: HGLMFYLMSFLSSLLMEVSLSPG*VPGSVV
Trigger: AACCACACTGCCAGGAACCCATCCTGGGCTTAGTGA...CACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGGTGAGTGGAGAGATCAACTTCCACGGTGAGTaGAGAGATCGAGACAGTCTC +
Preference number: 4 (lower is better)
Translates to: HLSIQFRHKATSTVSGEINFHGE*RDRDSL
Trigger: GAGACTGTCTCGATCTCTCCACTCACCGTGGAAGTT...GATCTCTCCACTCACCGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp TATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCTGCACGTGAAAACGCTATTCATATaGCAAGAGGATAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: YAGNAKGQWLSLLCSLHVKTLFI*QEDRRG
Trigger: CCCTCTCCTATCCTCTTGCCATATGAATAGCGTTTT...CACGTGCAGAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGCTGCACGGAGGAGGCTaGACTGTGACCATAAACTGT +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYELHGGG*TVTINC
Trigger: ACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAG...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCTCTGGCTCATCATTTTaGGACAGGGGCAGATGGTTT +
Preference number: 4 (lower is better)
Translates to: HVNRFNVCWHQLSVDQLSSGSSF*DRGRWF
Trigger: AAACCATCTGCCCCTGTCCCAAAATGATGAGCCAGA...GGAAAGCTGATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp ACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCGGTTTAATGCTAATCTaGCTCATCATTTTGGGACAG +
Preference number: 4 (lower is better)
Translates to: TVSGEIETVSDCAEATHCGLMLI*LIILGQ
Trigger: CTGTCCCAAAATGATGAGCCAGATTAGCATTAAACC...GCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TTCATGAAAGGTGTTGGGGACAAGCCTTCATGGGCTCCTAATCGACTGTCATTCAACAGAGAGAGGTACTaGGGAAGATTACGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: FMKGVGDKPSWAPNRLSFNRERY*GRLRKS
Trigger: GCTCTTGCGTAATCTTCCCCAGTACCTCTCTCTGTT...GAATGACAGTCGATTAGGAGCCCATGAAGGCTTGTCCCCAACACCTTTCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561152.1
CDS-3UTR TCA 90 bp CTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTGGGAAAACATCGCACTaGAGTCCAGTAGGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: LSDELPIFTSDGSVDQLLGKTSH*SPVGRS
Trigger: TGAGCGACCTACTGGACTTCAGTGCGATGTTTTCCC...AAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp AGGCTATGGTCACAGATGGTCTCTGCTTACCACTGTAAGGTAAATGTGCAAAGCCCTGATCCACTGAATTaGCTGCTTCCCAGTGTAGTT +
Preference number: 4 (lower is better)
Translates to: RLWSQMVSAYHCKVNVQSPDPLN*LLPSVV
Trigger: AACTACACTGGGAAGCAGTCAATTCAGTGGATCAGG...GCTTTGCACATTTACCTTACAGTGGTAAGCAGAGACCATCTGTGACCATAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CTTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTCAATACCTGATCCACTaGATTGACTGCTTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: LLPPVRFVSSDNLSCPSPQYLIH*IDCFPV
Trigger: CACTGGGAAGCAGTCAATTCAGTGGATCAGGTATTG...AGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCTGCACGTGTTTTCCCATCAGATTTaGGTTCATGAAAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: YAGNAKGQWLSLLCSLHVFSHQI*VHERCW
Trigger: CCAACACCTTTCATGAACTCAAATCTGATGGGAAAA...CACGTGCAGAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCTGCAGGGAGTGGAGTaGGTTTTCATAGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: ADVLSDELPIFTSDGSVDLQGVE*VFIAWG
Trigger: TCCCCAAGCTATGAAAACTCACTCCACTCCCTGCAG...GTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000343827.7
ENST00000557843.5
ENST00000559710.5
CDS-3UTR TCA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGCTATGTATATCACTGTaGCCAGCAGGCAAACTGGTG +
Preference number: 4 (lower is better)
Translates to: VLMRRGHLLSSLLITLELLCISL*PAGKLV
Trigger: CACCAGTTTGCCTGCTGGTCACAGTGATATACATAG...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CTGACAAGTACTGGTTTAATGCTAATCTGGCTCATCATTTTGGGACAGGGGCAGCTATGTATATCACTGTaGCCAGCAGGCAAACTGGTG +
Preference number: 4 (lower is better)
Translates to: LTSTGLMLIWLIILGQGQLCISL*PAGKLV
Trigger: CACCAGTTTGCCTGCTGGTCACAGTGATATACATAG...CTGCCCCTGTCCCAAAATGATGAGCCAGATTAGCATTAAACCAGTACTTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATACAGAGTCTTCCCGATaGGTTCCAACCATTGAAGCT +
Preference number: 4 (lower is better)
Translates to: CSLHVNRFNVCWHQLSVDTESSR*VPTIEA
Trigger: AGCTTCAATGGTTGGAACTCATCGGGAAGACTCTGT...ATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR TCA 90 bp CTTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTACAGAGTCTTCCCGATaGGTTCCAACCATTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LLPPVRFVSSDNLSCPSPTESSR*VPTIEA
Trigger: AGCTTCAATGGTTGGAACTCATCGGGAAGACTCTGT...AGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGACAGAGTCTTCCCGATaGGTTCCAACCATTGAAGCT +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLTESSR*VPTIEA
Trigger: AGCTTCAATGGTTGGAACTCATCGGGAAGACTCTGT...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp TGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATACAACAGTTCCAGACTaGCTTTGCAAGCCACCTCTA +
Preference number: 4 (lower is better)
Translates to: CSLHVNRFNVCWHQLSVDTTVPD*LCKPPL
Trigger: TAGAGGTGGCTTGCAAAGTCAGTCTGGAACTGTTGT...ATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR TCA 90 bp CCCTTCCTTTTTAAGACACTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTACAACAGTTCCAGACTaGCTTTGCAAGCCACCTCTA +
Preference number: 4 (lower is better)
Translates to: PFLFKTLIGMPGMLRANGTTVPD*LCKPPL
Trigger: TAGAGGTGGCTTGCAAAGTCAGTCTGGAACTGTTGT...ACCATTGGCCCTTAGCATTCCCGGCATACCTATTAGTGTCTTAAAAAGGAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CAATGGTTGTCACTGCTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGACAACAGTTCCAGACTaGCTTTGCAAGCCACCTCTA +
Preference number: 4 (lower is better)
Translates to: QWLSLLCSLHVNRFNVCWTTVPD*LCKPPL
Trigger: TAGAGGTGGCTTGCAAAGTCAGTCTGGAACTGTTGT...CCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAGCAGTGACAACCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR TCA 90 bp TCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGAGGCAACTTCCACGGTaGGTGGAGAGATCGAGACAG +
Preference number: 4 (lower is better)
Translates to: SLLMEVLTSCFDRRITFERQLPR*VERSRQ
Trigger: CTGTCTCGATCTCTCCACTCACCGTGGAAGTTGCCT...CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR TCA 90 bp AGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAATTTGTTCTCTGCACGTaGACCGCTTTAATGTATGCT +
Preference number: 4 (lower is better)
Translates to: SGEIETVSDCAEATHCLQFVLCT*TALMYA
Trigger: AGCATACATTAAAGCGGTTCACGTGCAGAGAACAAA...TTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR TCA 90 bp CTGACAAGTACTGGTTTAATGCTAATCTGGCTCATCATTTTGGGACAGGGGCAGCACTACCTGCCTTGGTaGCTACTGGGTTTTGTTATG +
Preference number: 4 (lower is better)
Translates to: LTSTGLMLIWLIILGQGQHYLPW*LLGFVM
Trigger: CATAACAAAACCCAGTAGTCACCAAGGCAGGTAGTG...CTGCCCCTGTCCCAAAATGATGAGCCAGATTAGCATTAAACCAGTACTTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCTGCACGTGCAGATGGTTTGCAGTTaGTTAAATCACCCACTCAAT +
Preference number: 4 (lower is better)
Translates to: YAGNAKGQWLSLLCSLHVQMVCS*LNHPLN
Trigger: ATTGAGTGGGTGATTTAATCAACTGCAAACCATCTG...CACGTGCAGAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGAGCCTGATTCTGTCCTaGAGGGTTTCCCAGATAATG +
Preference number: 4 (lower is better)
Translates to: VLMRRGHLLSSLLITLELSLILS*RVSQIM
Trigger: CATTATCTGGGAAACCCTTCAGGACAGAATCAGGCT...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR TCA 90 bp CAATGGTTGTCACTGCTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATACCAAGAGGATGTaGCAATTGCCATGGGTTTCG +
Preference number: 4 (lower is better)
Translates to: QWLSLLCSLHVNRFNVCWHTKRM*QLPWVS
Trigger: CGAAACCCATGGCAATTGTCACATCCTCTTGGTATG...CCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAGCAGTGACAACCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR TCA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGGTGAGTGGAGAGATCTTTCAGGGAGTGGAGTaGGTTTTCATAGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: HLSIQFRHKATSTVSGEIFQGVE*VFIAWG
Trigger: TCCCCAAGCTATGAAAACTCACTCCACTCCCTGAAA...GATCTCTCCACTCACCGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333725.10
ENST00000438423.6
ENST00000559703.1
CDS-3UTR TCA 90 bp GTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTCCAGGTCTTGGCCACTaGCTGGTACTTGAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: VANISWADVLSDELPIFTPGLGH*LVLELE
Trigger: TTCCAACTCAAGTACCAGTCAGTGGCCAAGACCTGG...AGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp AGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAAGTAATCCAGTATCTCTaGTGTACAGGGAAAATGAGC +
Preference number: 4 (lower is better)
Translates to: SGEIETVSDCAEATHCLQVIQYL*CTGKMS
Trigger: GCTCATTTTCCCTGTACAGCAGAGATACTGGATTAC...TTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp GTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTGTGAACTGCTGGTACTaGCGCGATGAAAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: VANISWADVLSDELPIFTVNCWY*RDESWT
Trigger: TGTCCAGCTTTCATCGCGGCAGTACCAGCAGTTCAC...AGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCGTGAACTGCTGGTACTaGCGCGATGAAAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSIVNCWY*RDESWT
Trigger: TGTCCAGCTTTCATCGCGGCAGTACCAGCAGTTCAC...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR GCA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGCAACGTAAGGTGAACTaGTGGTACTGCCGCGATGAA +
Preference number: 4 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEEQRKVN*WYCRDE
Trigger: TTCATCGCGGCAGTACCAGCAGTTCACCTTACGTTG...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR GCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGCAACGTAAGGTGAACTaGTGGTACTGCCGCGATGAA +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYEQRKVN*WYCRDE
Trigger: TTCATCGCGGCAGTACCAGCAGTTCACCTTACGTTG...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR GCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAGGCTTCCAATTGGTaGATTATGGGATGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLEASNW*IMGWSQ
Trigger: TTGGGACCATCCCATAATGCACCAATTGGAAGCCTC...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp CCCTTCCTTTTTAAGACACTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTTCTCTTAAGGCAGGCTaGTTTGGGGTTAAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: PFLFKTLIGMPGMLRANGSLKAG*FGVKVP
Trigger: AGGAACCTTAACCCCAAAGCAGCCTGCCTTAAGAGA...ACCATTGGCCCTTAGCATTCCCGGCATACCTATTAGTGTCTTAAAAAGGAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGTCTCTTAAGGCAGGCTaGTTTGGGGTTAAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLSLKAG*FGVKVP
Trigger: AGGAACCTTAACCCCAAAGCAGCCTGCCTTAAGAGA...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp CTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATTGTGGTTGGCGGCTCTaGCGATACGGCAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: LMSFLSSLLMEVLTSCFDCGWRL*RYGRNF
Trigger: AAAGTTTCTGCCGTATCGGCAGAGCCGCCAACCACA...ATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp AAGGGAGAAGGAACTGCAATTTTTAGAAGACTCATTGGCCCAATGAGATCAGCTTGTGGTTGGCGGCTCTaGCGATACGGCAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: KGEGTAIFRRLIGPMRSACGWRL*RYGRNF
Trigger: AAAGTTTCTGCCGTATCGGCAGAGCCGCCAACCACA...AGCTGATCTCATTGGGCCAATGAGTCTTCTAAAAATTGCAGTTCCTTCTCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560948.1
CDS-3UTR GCA 90 bp CATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGAGAGGATGTGACAATTaGCATGGGTTTCGCACGCAC +
Preference number: 4 (lower is better)
Translates to: HGLMFYLMSFLSSLLMEVRGCDN*HGFRTH
Trigger: GTGCGTGCGAAACCCATGGCAATTGTCACATCCTCT...CACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR CCA 90 bp TTCATGAAAGGTGTTGGGGACAAGCCTTCATGGGCTCCTAATCGACTGTCATTCCCCACTATTAACAGGTaGGGAAAACATCGCACTGAA +
Preference number: 4 (lower is better)
Translates to: FMKGVGDKPSWAPNRLSFPTINR*GKHRTE
Trigger: TTCAGTGCGATGTTTTCCCCACCTGTTAATAGTGGG...GAATGACAGTCGATTAGGAGCCCATGAAGGCTTGTCCCCAACACCTTTCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561152.1
CDS-3UTR CCA 90 bp GATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGGGGGACAAGCCTTCATaGGCTCCTAATCGACTGTCA +
Preference number: 4 (lower is better)
Translates to: DVLSDELPIFTSDGSVDQGDKPS*APNRLS
Trigger: TGACAGTCGATTAGGAGCCCATGAAGGCTTGTCCCC...CTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp AGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAAGAACATACTGGTTGGTaGCTTAGGAGATGGATAACT +
Preference number: 4 (lower is better)
Translates to: SGEIETVSDCAEATHCLQEHTGW*LRRWIT
Trigger: AGTTATCCATCTCCTAAGCCACCAACCAGTATGTTC...TTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCAGCGAACATACTGGTTaGTGGCTTAGGAGATGGATA +
Preference number: 4 (lower is better)
Translates to: LIGMPGMLRANGCHCFVLSEHTG*WLRRWI
Trigger: TATCCATCTCCTAAGCCACCAACCAGTATGTTCGCT...GAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATACCTATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATCCACCAAAACCAGGCTaGCTCATCCCATTTGATGAA +
Preference number: 4 (lower is better)
Translates to: CSLHVNRFNVCWHQLSVDPPKPG*LIPFDE
Trigger: TTCATCAAATGGGATGAGCCAGCCTGGTTTTGGTGG...ATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATGAGACATGTGGGAAGTaGAGGTCCCCAGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: LMSFLSSLLMEVLTSCFDETCGK*RSPEFH
Trigger: GTGGAATTCTGGGGACCTCCACTTCCCACATGTCTC...ATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTGCCGCGATGAAAGCTaGACATTGGTGGAAGACTCG +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSICRDES*TLVEDS
Trigger: CGAGTCTTCCACCAATGTCCAGCTTTCATCGCGGCA...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CCA 90 bp CTGATTAACACTGAAATGAAGAACAAGGCCACAGATAGAGTCCGATGTAACTGGCGTAAGGTGAACTGCTaGTACTGCCGCGATGAAAGC +
Preference number: 4 (lower is better)
Translates to: LINTEMKNKATDRVRCNWRKVNC*YCRDES
Trigger: GCTTTCATCGCGGCAGTACCAGCAGTTCACCTTACG...CCAGTTACATCGGACTCTATCTGTGGCCTTGTTCTTCATTTCAGTGTTAATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCCGTAAGGTGAACTGCTaGTACTGCCGCGATGAAAGC +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSIRKVNC*YCRDES
Trigger: GCTTTCATCGCGGCAGTACCAGCAGTTCACCTTACG...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CCA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCAGCAGCATTCCCTCTaGTTCCTAGAATGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITQQHSL*FLECCL
Trigger: CAGACAGCATTCTAGGAACCAGAGGGAATGCTGCTG...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CCA 90 bp TTTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCTTGCCCTCCAGGTCTTaGCCACTGACTGGTACCTGT +
Preference number: 4 (lower is better)
Translates to: FVANISWADVLSDELPIFLPSRS*PLTGTC
Trigger: ACAGGTACCAGTCAGTGGCCAAGACCTGGAGGGCAA...GAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATGAAGGTCCCACAGCATaGTTCCGCAGCACATGGATT +
Preference number: 4 (lower is better)
Translates to: LMSFLSSLLMEVLTSCFDEGPTA*FRSTWI
Trigger: AATCCATGTGCTGCGGAACCATGCTGTGGGACCTTC...ATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTGAAGGTCCCACAGCATaGTTCCGCAGCACATGGATT +
Preference number: 4 (lower is better)
Translates to: LSDELPIFTSDGSVDQLLEGPTA*FRSTWI
Trigger: AATCCATGTGCTGCGGAACCATGCTGTGGGACCTTC...AAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp GTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTGAAGGTCCCACAGCATaGTTCCGCAGCACATGGATT +
Preference number: 4 (lower is better)
Translates to: VANISWADVLSDELPIFTEGPTA*FRSTWI
Trigger: AATCCATGTGCTGCGGAACCATGCTGTGGGACCTTC...AGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp GTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCACTAAGCCCAGGATaGGTTCCTGGCAGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: VANISWADVLSDELPIFTSLSPG*VPGSVV
Trigger: AACCACACTGCCAGGAACCCATCCTGGGCTTAGTGA...AGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTCACTAAGCCCAGGATaGGTTCCTGGCAGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSISLSPG*VPGSVV
Trigger: AACCACACTGCCAGGAACCCATCCTGGGCTTAGTGA...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATTCACTAAGCCCAGGATaGGTTCCTGGCAGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: LMSFLSSLLMEVLTSCFDSLSPG*VPGSVV
Trigger: AACCACACTGCCAGGAACCCATCCTGGGCTTAGTGA...ATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp GCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACTCACTAAGCCCAGGATaGGTTCCTGGCAGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: ADVLSDELPIFTSDGSVDSLSPG*VPGSVV
Trigger: AACCACACTGCCAGGAACCCATCCTGGGCTTAGTGA...GTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATAACTTCCACGGTGAGTaGAGAGATCGAGACAGTCTC +
Preference number: 4 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYNFHGE*RDRDSL
Trigger: GAGACTGTCTCGATCTCTCCACTCACCGTGGAAGTT...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAACTTCCACGGTGAGTaGAGAGATCGAGACAGTCTC +
Preference number: 4 (lower is better)
Translates to: TVSDCAEATHCLQQKICCNFHGE*RDRDSL
Trigger: GAGACTGTCTCGATCTCTCCACTCACCGTGGAAGTT...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp CTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTCTGCACGGAGGAGGCTaGACTGTGACCATAAACTGT +
Preference number: 4 (lower is better)
Translates to: LSDELPIFTSDGSVDQLLLHGGG*TVTINC
Trigger: ACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAG...AAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp AGGCTATGGTCACAGATGGTCTCTGCTTACCACTGTAAGGTAAATGTGCAAAGCGGCTATGGTCACAGATaGTCTCTGCTTACCACTGTA +
Preference number: 4 (lower is better)
Translates to: RLWSQMVSAYHCKVNVQSGYGHR*SLLTTV
Trigger: TACAGTGGTAAGCAGAGACCATCTGTGACCATAGCC...GCTTTGCACATTTACCTTACAGTGGTAAGCAGAGACCATCTGTGACCATAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTGACAAGTACTGGTTTAATGCTAATCTGGCTCATCATTTTGGGACAGGGGCAGATGCTAGCTAGGCTATaGTCACAGATGGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LTSTGLMLIWLIILGQGQMLARL*SQMVSA
Trigger: AGCAGAGACCATCTGTGACCATAGCCTAGCTAGCAT...CTGCCCCTGTCCCAAAATGATGAGCCAGATTAGCATTAAACCAGTACTTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATATGCTAGCTAGGCTATaGTCACAGATGGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: CSLHVNRFNVCWHQLSVDMLARL*SQMVSA
Trigger: AGCAGAGACCATCTGTGACCATAGCCTAGCTAGCAT...ATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTCTGGCTCATCATTTTaGGACAGGGGCAGATGGTTT +
Preference number: 4 (lower is better)
Translates to: LLPPVRFVSSDNLSCPSPSGSSF*DRGRWF
Trigger: AAACCATCTGCCCCTGTCCCAAAATGATGAGCCAGA...AGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp ACTTCCACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACATGGACTGACAAGTACTaGTTTAATGCTAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: TSTVSGEIETVSDCAEATWTDKY*FNANLA
Trigger: AGCCAGATTAGCATTAAACCAGTACTTGTCAGTCCA...TGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGTGGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGCTCCCAGGGTTGTTGTaGTGGAAGACAGGTTTCATG +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYELPGLL*WKTGFM
Trigger: CATGAAACCTGTCTTCCACCACAACAACCCTGGGAG...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTCTCCCAGGGTTGTTGTaGTGGAAGACAGGTTTCATG +
Preference number: 4 (lower is better)
Translates to: SRQSLIVQKRHTACNKRFLPGLL*WKTGFM
Trigger: CATGAAACCTGTCTTCCACCACAACAACCCTGGGAG...AAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp GCTGCACGGAGGAGGCTGGACTGTGACCATAAACTGTTCAGATTTAGAGATCAAAGCTACATAGTGATTTaGGTCCTTTCCTCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: AARRRLDCDHKLFRFRDQSYIVI*VLSSVC
Trigger: GCACACAGAGGAAAGGACCCAAATCACTATGTAGCT...TTGATCTCTAAATCTGAACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCAGCTACATAGTGATTTaGGTCCTTTCCTCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: HVNRFNVCWHQLSVDQLSSYIVI*VLSSVC
Trigger: GCACACAGAGGAAAGGACCCAAATCACTATGTAGCT...GGAAAGCTGATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCAAAAAGGCCAGGCAGTaGCATATGTTCACTCACACA +
Preference number: 4 (lower is better)
Translates to: LIGMPGMLRANGCHCFVLKKARQ*HMFTHT
Trigger: TGTGTGAGTGAACATATGCCACTGCCTGGCCTTTTT...GAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATACCTATTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp ACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCGCAATAAACCAACAATaGAAACTGGAGAACAAGATG +
Preference number: 4 (lower is better)
Translates to: TVSGEIETVSDCAEATHCAINQQ*KLENKM
Trigger: CATCTTGTTCTCCAGTTTCCATTGTTGGTTTATTGC...GCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
CDS-3UTR TCA 90 bp CATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGCCTGATCCACTGAATTaGCTGCTTCCCAGTGTAGTT +
Preference number: 4 (lower is better)
Translates to: HGLMFYLMSFLSSLLMEVPDPLN*LLPSVV
Trigger: AACTACACTGGGAAGCAGTCAATTCAGTGGATCAGG...CACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGCAATACCTGATCCACTaGATTGACTGCTTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYEQYLIH*IDCFPV
Trigger: CACTGGGAAGCAGTCAATTCAGTGGATCAGGTATTG...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGACTTGTAGCAGAGAATaGATAGTATGCTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: VLMRRGHLLSSLLITLELTCSRE*IVCCPR
Trigger: CCTGGGACAGCATACTATTCATTCTCTGCTACAAGT...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp AGGCTATGGTCACAGATGGTCTCTGCTTACCACTGTAAGGTAAATGTGCAAAGCACTCAAGCGGTCATGTaGATGAAGGTTGCCATAACT +
Preference number: 4 (lower is better)
Translates to: RLWSQMVSAYHCKVNVQSTQAVM*MKVAIT
Trigger: AGTTATGGCAACCTTCATTCACATGACCGCTTGAGT...GCTTTGCACATTTACCTTACAGTGGTAAGCAGAGACCATCTGTGACCATAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CAATGGTTGTCACTGCTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGACTCAAGCGGTCATGTaGATGAAGGTTGCCATAACT +
Preference number: 4 (lower is better)
Translates to: QWLSLLCSLHVNRFNVCWTQAVM*MKVAIT
Trigger: AGTTATGGCAACCTTCATTCACATGACCGCTTGAGT...CCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAGCAGTGACAACCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATACTCAAGCGGTCATGTaGATGAAGGTTGCCATAACT +
Preference number: 4 (lower is better)
Translates to: CSLHVNRFNVCWHQLSVDTQAVM*MKVAIT
Trigger: AGTTATGGCAACCTTCATTCACATGACCGCTTGAGT...ATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TCACAAATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGTGCATCACCTGTCTGTaGGCTTCCAGCAGCATTCCC +
Preference number: 4 (lower is better)
Translates to: SQMTDLLGIILIRVPEVLCITCL*ASSSIP
Trigger: GGGAATGCTGCTGGAAGCTCACAGACAGGTGATGCA...CAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCATTTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCACATTAACTTTTTCCCTACTGACTGGTACCTGTaGGAGGTGAAGGTGATCCAA +
Preference number: 4 (lower is better)
Translates to: CMLASAECRSAFHINFFPTDWYL*EVKVIQ
Trigger: TTGGATCACCTTCACCTCTCACAGGTACCAGTCAGT...AGGGAAAAAGTTAATGTGGAAAGCTGATCTACACTCAGCTGATGCCAGCATACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCACTGACTGGTACCTGTaGGAGGTGAAGGTGATCCAA +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSITDWYL*EVKVIQ
Trigger: TTGGATCACCTTCACCTCTCACAGGTACCAGTCAGT...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR TCA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTATGTATATCACTGTaGCCAGCAGGCAAACTGGTG +
Preference number: 4 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITLCISL*PAGKLV
Trigger: CACCAGTTTGCCTGCTGGTCACAGTGATATACATAG...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGACAGAGTCTTCCCGATaGGTTCCAACCATTGAAGCT +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYETESSR*VPTIEA
Trigger: AGCTTCAATGGTTGGAACTCATCGGGAAGACTCTGT...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp TCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTACAGAGTCTTCCCGATaGGTTCCAACCATTGAAGCT +
Preference number: 4 (lower is better)
Translates to: SRQSLIVQKRHTACNKRFTESSR*VPTIEA
Trigger: AGCTTCAATGGTTGGAACTCATCGGGAAGACTCTGT...AAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CAATGGTTGTCACTGCTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCTAGACAGGACTGAATaGTTGCCATTGAGACTGACA +
Preference number: 4 (lower is better)
Translates to: QWLSLLCSLHVNRFNVCWLDRTE*LPLRLT
Trigger: TGTCAGTCTCAATGGCAATCATTCAGTCCTGTCTAG...CCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAGCAGTGACAACCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR TCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGTTCAGGTCTGTGCTTaGAGTAGTGACTGTACTAGA +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLVQVCA*SSDCTR
Trigger: TCTAGTACAGTCACTACTTCAAGCACAGACCTGAAC...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGGTTCAGGTCTGTGCTTaGAGTAGTGACTGTACTAGA +
Preference number: 4 (lower is better)
Translates to: VLMRRGHLLSSLLITLELVQVCA*SSDCTR
Trigger: TCTAGTACAGTCACTACTTCAAGCACAGACCTGAAC...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAACAACAGTTCCAGACTaGCTTTGCAAGCCACCTCTA +
Preference number: 4 (lower is better)
Translates to: QSLIVQKRHTACNKRFVATTVPD*LCKPPL
Trigger: TAGAGGTGGCTTGCAAAGTCAGTCTGGAACTGTTGT...TGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGACAACAGTTCCAGACTaGCTTTGCAAGCCACCTCTA +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYETTVPD*LCKPPL
Trigger: TAGAGGTGGCTTGCAAAGTCAGTCTGGAACTGTTGT...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGACAACAGTTCCAGACTaGCTTTGCAAGCCACCTCTA +
Preference number: 4 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEETTVPD*LCKPPL
Trigger: TAGAGGTGGCTTGCAAAGTCAGTCTGGAACTGTTGT...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGTTGTCCAAGTCCTTATaGGGAGAGGTCACCTTCTAT +
Preference number: 4 (lower is better)
Translates to: VLMRRGHLLSSLLITLELLSKSL*GEVTFY
Trigger: ATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAA...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp AGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAATGTCTTCAGATAATCTaGGTTGTCCAAGTCCTTATG +
Preference number: 4 (lower is better)
Translates to: SGEIETVSDCAEATHCLQCLQII*VVQVLM
Trigger: CATAAGGACTTGGACAACTCAGATTATCTGAAGACA...TTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp TCACAAATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGAGGCAACTTCCACGGTaGGTGGAGAGATCGAGACAG +
Preference number: 4 (lower is better)
Translates to: SQMTDLLGIILIRVPEVLRQLPR*VERSRQ
Trigger: CTGTCTCGATCTCTCCACTCACCGTGGAAGTTGCCT...CAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCATTTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GCTGCACGGAGGAGGCTGGACTGTGACCATAAACTGTTCAGATTTAGAGATCAATTTGTTCTCTGCACGTaGACCGCTTTAATGTATGCT +
Preference number: 4 (lower is better)
Translates to: AARRRLDCDHKLFRFRDQFVLCT*TALMYA
Trigger: AGCATACATTAAAGCGGTTCACGTGCAGAGAACAAA...TTGATCTCTAAATCTGAACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCACTACCTGCCTTGGTaGCTACTGGGTTTTGTTATG +
Preference number: 4 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITHYLPW*LLGFVM
Trigger: CATAACAAAACCCAGTAGTCACCAAGGCAGGTAGTG...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CTGACAAGTACTGGTTTAATGCTAATCTGGCTCATCATTTTGGGACAGGGGCAGCTTTCCTCTGTGTGCTaGTTGCCACTGTTGATATTG +
Preference number: 4 (lower is better)
Translates to: LTSTGLMLIWLIILGQGQLSSVC*LPLLIL
Trigger: CAATATCAACAGTGGCAATCAGCACACAGAGGAAAG...CTGCCCCTGTCCCAAAATGATGAGCCAGATTAGCATTAAACCAGTACTTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGCTTTCCTCTGTGTGCTaGTTGCCACTGTTGATATTG +
Preference number: 4 (lower is better)
Translates to: VLMRRGHLLSSLLITLELLSSVC*LPLLIL
Trigger: CAATATCAACAGTGGCAATCAGCACACAGAGGAAAG...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp ACTTCCACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACAAAGTTCACAAATGACTaGCTTGTTAGGAATCATCCT +
Preference number: 4 (lower is better)
Translates to: TSTVSGEIETVSDCAEATKFTND*LVRNHP
Trigger: AGGATGATTCCTAACAAGTCAGTCATTTGTGAACTT...TGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGTGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp AGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAAGTTAGGCACCCAATGTaGACAGTGGATTTCATAATT +
Preference number: 4 (lower is better)
Translates to: SGEIETVSDCAEATHCLQVRHPM*TVDFII
Trigger: AATTATGAAATCCACTGTTCACATTGGGTGCCTAAC...TTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR TCA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTTTTCAGGGAGTGGAGTaGGTTTTCATAGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITFQGVE*VFIAWG
Trigger: TCCCCAAGCTATGAAAACTCACTCCACTCCCTGAAA...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333725.10
ENST00000438423.6
ENST00000543579.5
ENST00000559703.1
CDS-3UTR TCA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGTCTTGCAAATGCTCGTaGAGTTGCTGCTCAACTCGA +
Preference number: 4 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEESCKCS*SCCSTR
Trigger: TCGAGTTGAGCAGCAACTTCACGAGCATTTGCAAGA...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333725.10
ENST00000438423.6
ENST00000543579.5
ENST00000559703.1
CDS-3UTR TCA 90 bp GGATTGTATCCAGATTACATAAGCCCACACCAGAGCCAAAGAAGATGGAGGAGGCAAAGACAACCTGGCTaGTGTTTACATATGACCCAT +
Preference number: 4 (lower is better)
Translates to: GLYPDYISPHQSQRRWRRQRQPG*CLHMTH
Trigger: ATGGGTCATATGTAAACATCAGCCAGGTTGTCTTTG...CCTCCTCCATCTTCTTTGGCTCTGGTGTGGGCTTATGTAATCTGGATACAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560948.1
CDS-3UTR TCA 90 bp TGGAATGCCAAGGGAGAAGGAACTGCAATTTTTAGAAGACTCATTGGCCCAATGTCTTTTGTAGGAAGATaGGGTGCTGTGGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: WNAKGEGTAIFRRLIGPMSFVGR*GAVEAM
Trigger: CATGGCTTCCACAGCACCTCATCTTCCTACAAAAGA...CATTGGGCCAATGAGTCTTCTAAAAATTGCAGTTCCTTCTCCCTTGGCATTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560948.1
CDS-3UTR GCA 90 bp CAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAGAGGCTTCCAATTGGTaGATTATGGGATGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: QSLIVQKRHTACNKRFVAEASNW*IMGWSQ
Trigger: TTGGGACCATCCCATAATGCACCAATTGGAAGCCTC...TGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp TCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGAGGCTTCCAATTGGTaGATTATGGGATGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: SRQSLIVQKRHTACNKRFEASNW*IMGWSQ
Trigger: TTGGGACCATCCCATAATGCACCAATTGGAAGCCTC...AAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTGAGGCTTCCAATTGGTaGATTATGGGATGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITEASNW*IMGWSQ
Trigger: TTGGGACCATCCCATAATGCACCAATTGGAAGCCTC...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp CCCTTCCTTTTTAAGACACTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTTTGAAGCTGATCGACTaGTTGCAACAAGGCTTGATC +
Preference number: 4 (lower is better)
Translates to: PFLFKTLIGMPGMLRANGLKLID*LQQGLI
Trigger: GATCAAGCCTTGTTGCAAGCAGTCGATCAGCTTCAA...ACCATTGGCCCTTAGCATTCCCGGCATACCTATTAGTGTCTTAAAAAGGAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp CAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCATCTCTTAAGGCAGGCTaGTTTGGGGTTAAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: QSLIVQKRHTACNKRFVASLKAG*FGVKVP
Trigger: AGGAACCTTAACCCCAAAGCAGCCTGCCTTAAGAGA...TGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGTCTCTTAAGGCAGGCTaGTTTGGGGTTAAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEESLKAG*FGVKVP
Trigger: AGGAACCTTAACCCCAAAGCAGCCTGCCTTAAGAGA...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGTCTCTTAAGGCAGGCTaGTTTGGGGTTAAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYESLKAG*FGVKVP
Trigger: AGGAACCTTAACCCCAAAGCAGCCTGCCTTAAGAGA...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp TCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTGTGGTTGGCGGCTCTaGCGATACGGCAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: SLLMEVLTSCFDRRITFECGWRL*RYGRNF
Trigger: AAAGTTTCTGCCGTATCGGCAGAGCCGCCAACCACA...CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp AGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAAGAAGTGTTGACCAGTTaGTTTGATCGTAGGATTACA +
Preference number: 4 (lower is better)
Translates to: SGEIETVSDCAEATHCLQEVLTS*FDRRIT
Trigger: TGTAATCCTACGATCAAAGCAACTGGTCAACACTTC...TTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp CACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCATTTATCACACTACCTaGCTTGGTGACTACTGGGTT +
Preference number: 4 (lower is better)
Translates to: HVNRFNVCWHQLSVDQLSIYHTT*LGDYWV
Trigger: AACCCAGTAGTCACCAAGGCAGGTAGTGTGATAAAT...GGAAAGCTGATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATAGCTCTAGACCAGATTaGCAACTTAGCTCCACAAGC +
Preference number: 4 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYSSRPD*QLSSTS
Trigger: GCTTGTGGAGCTAAGTTGGCAATCTGGTCTAGAGCT...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR CCA 90 bp TTCATGAAAGGTGTTGGGGACAAGCCTTCATGGGCTCCTAATCGACTGTCATTCGCTTCCCAGTGTAGTTaGTCTAGTTTTCCCACTATT +
Preference number: 4 (lower is better)
Translates to: FMKGVGDKPSWAPNRLSFASQCS*SSFPTI
Trigger: AATAGTGGGAAAACTAGACCAACTACACTGGGAAGC...GAATGACAGTCGATTAGGAGCCCATGAAGGCTTGTCCCCAACACCTTTCATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561152.1
CDS-3UTR CCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCGTTCATGAAAGGTGTTaGGGACAAGCCTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSIVHERC*GQAFMG
Trigger: GCCCATGAAGGCTTGTCCCCAACACCTTTCATGAAC...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp GCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACTGCAGAGTCATGGAGTaGTCTCCTCCTGGAACTTGT +
Preference number: 4 (lower is better)
Translates to: ADVLSDELPIFTSDGSVDCRVME*SPPGTC
Trigger: ACAAGTTCCAGGAGGAGACCACTCCATGACTCTGCA...GTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCACATTAACTTTTTCCCTTGCAGAGTCATGGAGTaGTCTCCTCCTGGAACTTGT +
Preference number: 4 (lower is better)
Translates to: CMLASAECRSAFHINFFPCRVME*SPPGTC
Trigger: ACAAGTTCCAGGAGGAGACCACTCCATGACTCTGCA...AGGGAAAAAGTTAATGTGGAAAGCTGATCTACACTCAGCTGATGCCAGCATACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCGAACATACTGGTTGGTaGCTTAGGAGATGGATAACT +
Preference number: 4 (lower is better)
Translates to: LIGMPGMLRANGCHCFVLEHTGW*LRRWIT
Trigger: AGTTATCCATCTCCTAAGCCACCAACCAGTATGTTC...GAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATACCTATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTAGCGAACATACTGGTTaGTGGCTTAGGAGATGGATA +
Preference number: 4 (lower is better)
Translates to: LLPPVRFVSSDNLSCPSPSEHTG*WLRRWI
Trigger: TATCCATCTCCTAAGCCACCAACCAGTATGTTCGCT...AGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
CDS-3UTR CCA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGAGCGAACATACTGGTTaGTGGCTTAGGAGATGGATA +
Preference number: 4 (lower is better)
Translates to: VLMRRGHLLSSLLITLELSEHTG*WLRRWI
Trigger: TATCCATCTCCTAAGCCACCAACCAGTATGTTCGCT...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CCA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCCACCAAAACCAGGCTaGCTCATCCCATTTGATGAA +
Preference number: 4 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITPPKPG*LIPFDE
Trigger: TTCATCAAATGGGATGAGCCAGCCTGGTTTTGGTGG...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CCA 90 bp CATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGCCACCAAAACCAGGCTaGCTCATCCCATTTGATGAA +
Preference number: 4 (lower is better)
Translates to: HGLMFYLMSFLSSLLMEVPPKPG*LIPFDE
Trigger: TTCATCAAATGGGATGAGCCAGCCTGGTTTTGGTGG...CACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAAACATTGCCGCGATGAAAGCTaGACATTGGTGGAAGACTCG +
Preference number: 4 (lower is better)
Translates to: SDCAEATHCLQQKICCKHCRDES*TLVEDS
Trigger: CGAGTCTTCCACCAATGTCCAGCTTTCATCGCGGCA...ATGTTTGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCACATTAACTTTTTCCCTCAGCAGCATTCCCTCTaGTTCCTAGAATGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: CMLASAECRSAFHINFFPQQHSL*FLECCL
Trigger: CAGACAGCATTCTAGGAACCAGAGGGAATGCTGCTG...AGGGAAAAAGTTAATGTGGAAAGCTGATCTACACTCAGCTGATGCCAGCATACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TTTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCGAAGGTCCCACAGCATaGTTCCGCAGCACATGGATT +
Preference number: 4 (lower is better)
Translates to: FVANISWADVLSDELPIFEGPTA*FRSTWI
Trigger: AATCCATGTGCTGCGGAACCATGCTGTGGGACCTTC...GAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTTCAGCAGGCAAACTGGTaGAAGGTCCCACAGCATGGT +
Preference number: 4 (lower is better)
Translates to: LLMEVLTSCFDRRITFEFQQANW*KVPQHG
Trigger: ACCATGCTGTGGGACCTTCCACCAGTTTGCCTGCTG...AAACTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGATTGAGGCTTCCAATTaGTGCATTATGGGATGGTCC +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLIEASN*CIMGWS
Trigger: GGACCATCCCATAATGCACCAATTGGAAGCCTCAAT...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp ACTTCCACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACAACCTTGATATCTTTTTaGGAGGATTCATCATCTGAC +
Preference number: 4 (lower is better)
Translates to: TSTVSGEIETVSDCAEATTLISF*EDSSSD
Trigger: GTCAGATGATGAATCCTCCCAAAAAGATATCAAGGT...TGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGTGGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp GAAGATGGAGGAGGAATGGGATTCATTCTTCCAGACAATACGTGTAAGTTTACTTCACTAAGCCCAGGATaGGTTCCTGGCAGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: EDGGGMGFILPDNTCKFTSLSPG*VPGSVV
Trigger: AACCACACTGCCAGGAACCCATCCTGGGCTTAGTGA...AGTAAACTTACACGTATTGTCTGGAAGAATGAATCCCATTCCTCCTCCATCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560948.1
CDS-3UTR CCA 90 bp AGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAAGTTGCAAACATCTCATaGGCTGATGTTCTATCTGAT +
Preference number: 4 (lower is better)
Translates to: SGEIETVSDCAEATHCLQVANIS*ADVLSD
Trigger: ATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC...TTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp GCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACAACTTCCACGGTGAGTaGAGAGATCGAGACAGTCTC +
Preference number: 4 (lower is better)
Translates to: ADVLSDELPIFTSDGSVDNFHGE*RDRDSL
Trigger: GAGACTGTCTCGATCTCTCCACTCACCGTGGAAGTT...GTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp CTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTAACTTCCACGGTGAGTaGAGAGATCGAGACAGTCTC +
Preference number: 4 (lower is better)
Translates to: LSDELPIFTSDGSVDQLLNFHGE*RDRDSL
Trigger: GAGACTGTCTCGATCTCTCCACTCACCGTGGAAGTT...AAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGGCTATGGTCACAGATaGTCTCTGCTTACCACTGTA +
Preference number: 4 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYGYGHR*SLLTTV
Trigger: TACAGTGGTAAGCAGAGACCATCTGTGACCATAGCC...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATAGCTACATAGTGATTTaGGTCCTTTCCTCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: CSLHVNRFNVCWHQLSVDSYIVI*VLSSVC
Trigger: GCACACAGAGGAAAGGACCCAAATCACTATGTAGCT...ATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGGTGAGTGGAGAGATCAGCTACATAGTGATTTaGGTCCTTTCCTCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: HLSIQFRHKATSTVSGEISYIVI*VLSSVC
Trigger: GCACACAGAGGAAAGGACCCAAATCACTATGTAGCT...GATCTCTCCACTCACCGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGGTCTTGGCCACTGACTaGTACTTGAGTTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEEVLATD*YLSWKT
Trigger: TGTCTTCCAACTCAAGTACCAGTCAGTGGCCAAGAC...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGTCTTGGCCACTGACTaGTACTTGAGTTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYEVLATD*YLSWKT
Trigger: TGTCTTCCAACTCAAGTACCAGTCAGTGGCCAAGAC...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559703.1
ENST00000559710.5
3UTR CAA 72 bp GAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTaGCAACAAAAGATTTGTTGCAAACATCTCATGGGC +
Preference number: 4 (lower is better)
Translates to: ETVSDCAEATHC*QQKICCKHLMG
Trigger: GCCCATGAGATGTTTGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp GATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGCCTGATCCACTGAATTaGCTGCTTCCCAGTGTAGTT +
Preference number: 4 (lower is better)
Translates to: DVLSDELPIFTSDGSVDQPDPLN*LLPSVV
Trigger: AACTACACTGGGAAGCAGTCAATTCAGTGGATCAGG...CTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCCCTGATCCACTGAATTaGCTGCTTCCCAGTGTAGTT +
Preference number: 4 (lower is better)
Translates to: FYLMSFLSSLLMEVLTSCPDPLN*LLPSVV
Trigger: AACTACACTGGGAAGCAGTCAATTCAGTGGATCAGG...GCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAATACCTGATCCACTaGATTGACTGCTTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: ADVLSDELPIFTSDGSVDQYLIH*IDCFPV
Trigger: CACTGGGAAGCAGTCAATTCAGTGGATCAGGTATTG...GTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp ATGAAAGGTGTTGGGGACAAGCCTTCATGGGCTCCTAATCGACTGTCATTCAAGTTTTCCCATCAGATTTaGGTTCATGAAAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: MKGVGDKPSWAPNRLSFKFSHQI*VHERCW
Trigger: CCAACACCTTTCATGAACTCAAATCTGATGGGAAAA...CTTGAATGACAGTCGATTAGGAGCCCATGAAGGCTTGTCCCCAACACCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561152.1
CDS-3UTR TCA 90 bp TCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTACTTGTAGCAGAGAATaGATAGTATGCTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SRQSLIVQKRHTACNKRFTCSRE*IVCCPR
Trigger: CCTGGGACAGCATACTATTCATTCTCTGCTACAAGT...AAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGACTTGTAGCAGAGAATaGATAGTATGCTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: HGLMFYLMSFLSSLLMEVTCSRE*IVCCPR
Trigger: CCTGGGACAGCATACTATTCATTCTCTGCTACAAGT...CACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGACGGTTGAAATCATCTaGATTTGGGGATGGTGCATA +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLTVEII*IWGWCI
Trigger: TATGCACCATCCCCAAATTCAGATGATTTCAACCGT...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR TCA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGACTCAAGCGGTCATGTaGATGAAGGTTGCCATAACT +
Preference number: 4 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEETQAVM*MKVAIT
Trigger: AGTTATGGCAACCTTCATTCACATGACCGCTTGAGT...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000543579.5
ENST00000557843.5
CDS-3UTR TCA 90 bp TCACAAATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGTGCTGTCTGATCCATTaGTGGGAGGAGTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: SQMTDLLGIILIRVPEVLCCLIH*WEECVR
Trigger: CCTCACACACTCCTCCCATCAATGGATCAGACAGCA...CAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCATTTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TTTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTGACTGGTACCTGTaGGAGGTGAAGGTGATCCAA +
Preference number: 4 (lower is better)
Translates to: FVANISWADVLSDELPIFTDWYL*EVKVIQ
Trigger: TTGGATCACCTTCACCTCTCACAGGTACCAGTCAGT...GAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCTATGTATATCACTGTaGCCAGCAGGCAAACTGGTG +
Preference number: 4 (lower is better)
Translates to: ADVLSDELPIFTSDGSVDLCISL*PAGKLV
Trigger: CACCAGTTTGCCTGCTGGTCACAGTGATATACATAG...GTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CAGGGTTGTTGTGGTGGAAGACAGGTTTCATGGAAGTTCAAAGTGATTATGTCTACAGAGTCTTCCCGATaGGTTCCAACCATTGAAGCT +
Preference number: 4 (lower is better)
Translates to: QGCCGGRQVSWKFKVIMSTESSR*VPTIEA
Trigger: AGCTTCAATGGTTGGAACTCATCGGGAAGACTCTGT...AGACATAATCACTTTGAACTTCCATGAAACCTGTCTTCCACCACAACAACCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCACAGAGTCTTCCCGATaGGTTCCAACCATTGAAGCT +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSITESSR*VPTIEA
Trigger: AGCTTCAATGGTTGGAACTCATCGGGAAGACTCTGT...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATCTAGACAGGACTGAATaGTTGCCATTGAGACTGACA +
Preference number: 4 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYLDRTE*LPLRLT
Trigger: TGTCAGTCTCAATGGCAATCATTCAGTCCTGTCTAG...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CTGACAAGTACTGGTTTAATGCTAATCTGGCTCATCATTTTGGGACAGGGGCAGTGTACTAGACAGGACTaGATGATTGCCATTGAGACT +
Preference number: 4 (lower is better)
Translates to: LTSTGLMLIWLIILGQGQCTRQD*MIAIET
Trigger: AGTCTCAATGGCAATCATTCAGTCCTGTCTAGTACA...CTGCCCCTGTCCCAAAATGATGAGCCAGATTAGCATTAAACCAGTACTTGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGTTCAGGTCTGTGCTTaGAGTAGTGACTGTACTAGA +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYEVQVCA*SSDCTR
Trigger: TCTAGTACAGTCACTACTTCAAGCACAGACCTGAAC...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp TCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTCAGGTCTGTGCTTaGAGTAGTGACTGTACTAGA +
Preference number: 4 (lower is better)
Translates to: SRQSLIVQKRHTACNKRFVQVCA*SSDCTR
Trigger: TCTAGTACAGTCACTACTTCAAGCACAGACCTGAAC...AAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGAACTCTGGAACTGGCTaGTGTTTACATATGACCCAT +
Preference number: 4 (lower is better)
Translates to: VLMRRGHLLSSLLITLELNSGTG*CLHMTH
Trigger: ATGGGTCATATGTAAACATCAGCCAGTTCCAGAGTT...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCTTGTCCAAGTCCTTATaGGGAGAGGTCACCTTCTAT +
Preference number: 4 (lower is better)
Translates to: TVSDCAEATHCLQQKICCLSKSL*GEVTFY
Trigger: ATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAA...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGTTGTCCAAGTCCTTATaGGGAGAGGTCACCTTCTAT +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYELSKSL*GEVTFY
Trigger: ATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAA...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CAATGGTTGTCACTGCTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGATAAGGAAATACGGGTaGCCATTGCTCTTGTATTCC +
Preference number: 4 (lower is better)
Translates to: QWLSLLCSLHVNRFNVCWIRKYG*PLLLYS
Trigger: GGAATACAAGAGCAATGGTCACCCGTATTTCCTTAT...CCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAGCAGTGACAACCATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCCAGATGGTTTGCAGTTaGTTAAATCACCCACTCAAT +
Preference number: 4 (lower is better)
Translates to: LIGMPGMLRANGCHCFVLQMVCS*LNHPLN
Trigger: ATTGAGTGGGTGATTTAATCAACTGCAAACCATCTG...GAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATACCTATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATCTTTCCTCTGTGTGCTaGTTGCCACTGTTGATATTG +
Preference number: 4 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYLSSVC*LPLLIL
Trigger: CAATATCAACAGTGGCAATCAGCACACAGAGGAAAG...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATTTAGGAAAAGCAGTGTaGGTGTTTCTGGGACGAATG +
Preference number: 4 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYLGKAV*VFLGRM
Trigger: CATTCGTCCCAGAAACACTCACACTGCTTTTCCTAA...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR TCA 90 bp CTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATTTAGCTCCACAAGCCTaGTTCTGTCCTGAAGGGTTT +
Preference number: 4 (lower is better)
Translates to: LMSFLSSLLMEVLTSCFDLAPQA*FCPEGF
Trigger: AAACCCTTCAGGACAGAATCAGGCTTGTGGAGCTAA...ATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR TCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTCTTGCAAATGCTCGTaGAGTTGCTGCTCAACTCGA +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSISCKCS*SCCSTR
Trigger: TCGAGTTGAGCAGCAACTTCACGAGCATTTGCAAGA...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333725.10
ENST00000438423.6
ENST00000543579.5
ENST00000559703.1
CDS-3UTR TCA 90 bp GCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACTCTTGCAAATGCTCGTaGAGTTGCTGCTCAACTCGA +
Preference number: 4 (lower is better)
Translates to: ADVLSDELPIFTSDGSVDSCKCS*SCCSTR
Trigger: TCGAGTTGAGCAGCAACTTCACGAGCATTTGCAAGA...GTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333725.10
ENST00000438423.6
ENST00000559703.1
CDS-3UTR TCA 90 bp TTTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCCCACTGACTGGTACTTaGGTTGGAAGACATGAGTCC +
Preference number: 4 (lower is better)
Translates to: FVANISWADVLSDELPIFPLTGT*VGRHES
Trigger: GGACTCATGTCTTCCAACTCAAGTACCAGTCAGTGG...GAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp ACAATACGTGTAAGTTTACTTGACTGTGGAATGCCAAGGGAGAAGGAACTGCAAGACTCATTGGCCCAATaGGATCAGCTATTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: TIRVSLLDCGMPREKELQDSLAQ*DQLLSQ
Trigger: CTGAGACAATAGCTGATCTCATTGGGCCAATGAGTC...TTGCAGTTCCTTCTCCCTTGGCATTCCACAGTCAAGTAAACTTACACGTATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560948.1
CDS-3UTR GCA 90 bp CTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGTAATCCAGTATCTCTaGTGTACAGGGAAAATGAGC +
Preference number: 4 (lower is better)
Translates to: LCSLHVNRFNVCWHQLSVVIQYL*CTGKMS
Trigger: GCTCATTTTCCCTGTACAGCAGAGATACTGGATTAC...TACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp ATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGTCTTGTCAAGGGATCAAGCGCTaGAGAGTCATGGAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: MTDLLGIILIRVPEVLSCQGIKR*RVMEWS
Trigger: AGACCACTCCATGACTCTGCAGCGCTTGATCCCTTG...ACAAGACAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp CTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCCATGTGAATGAAGGTTaGCATAACTACTGGATTGAG +
Preference number: 4 (lower is better)
Translates to: LIGMPGMLRANGCHCFVLHVNEG*HNYWIE
Trigger: CTCAATCCAGTAGTTATGGCAACCTTCATTCACATG...GAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATACCTATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp CTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTATTGACGGAAAACTACTaGTGGTATGGTCAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: LCSLHVNRFNVCWHQLSVLTENY*WYGQEN
Trigger: ATTCTCCTGACCATACCAGCAGTAGTTTTCCGTCAA...TACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp CTTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTTGACGGAAAACTACTaGTGGTATGGTCAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: LLPPVRFVSSDNLSCPSPLTENY*WYGQEN
Trigger: ATTCTCCTGACCATACCAGCAGTAGTTTTCCGTCAA...AGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
CDS-3UTR GCA 90 bp CTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTGAGGCTTCCAATTGGTaGATTATGGGATGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: LSDELPIFTSDGSVDQLLEASNW*IMGWSQ
Trigger: TTGGGACCATCCCATAATGCACCAATTGGAAGCCTC...AAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp GTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTGAGGCTTCCAATTGGTaGATTATGGGATGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: VANISWADVLSDELPIFTEASNW*IMGWSQ
Trigger: TTGGGACCATCCCATAATGCACCAATTGGAAGCCTC...AGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGTTGAAGCTGATCGACTaGTTGCAACAAGGCTTGATC +
Preference number: 4 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEELKLID*LQQGLI
Trigger: GATCAAGCCTTGTTGCAAGCAGTCGATCAGCTTCAA...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTTTGAAGCTGATCGACTaGTTGCAACAAGGCTTGATC +
Preference number: 4 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITLKLID*LQQGLI
Trigger: GATCAAGCCTTGTTGCAAGCAGTCGATCAGCTTCAA...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp CTTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTGCCAAGCTCTTTGAATaGTTCATTAATATCCCGCAC +
Preference number: 4 (lower is better)
Translates to: LLPPVRFVSSDNLSCPSPAKLFE*FINIPH
Trigger: GTGCGGGATATTAATGAAGCATTCAAAGAGCTTGGC...AGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGGCCAAGCTCTTTGAATaGTTCATTAATATCCCGCAC +
Preference number: 4 (lower is better)
Translates to: VLMRRGHLLSSLLITLELAKLFE*FINIPH
Trigger: GTGCGGGATATTAATGAAGCATTCAAAGAGCTTGGC...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp TGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATTTCCTCTCTCTGACTTaGTGTTCTAGACTAAGGATG +
Preference number: 4 (lower is better)
Translates to: CSLHVNRFNVCWHQLSVDFLSLT*CSRLRM
Trigger: CATCCTTAGTCTAGAACAGCAAGTCAGAGAGAGGAA...ATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR GCA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGTTCCTCTCTCTGACTTaGTGTTCTAGACTAAGGATG +
Preference number: 4 (lower is better)
Translates to: VLMRRGHLLSSLLITLELFLSLT*CSRLRM
Trigger: CATCCTTAGTCTAGAACAGCAAGTCAGAGAGAGGAA...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGGTGAGTGGAGAGATCAACCGCTTTAATGTATaGTGGCATCAGCTGAGTGTA +
Preference number: 4 (lower is better)
Translates to: HLSIQFRHKATSTVSGEINRFNV*WHQLSV
Trigger: TACACTCAGCTGATGCCAGCATACATTAAAGCGGTT...GATCTCTCCACTCACCGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR GCA 90 bp TGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATATTTATCACACTACCTaGCTTGGTGACTACTGGGTT +
Preference number: 4 (lower is better)
Translates to: CSLHVNRFNVCWHQLSVDIYHTT*LGDYWV
Trigger: AACCCAGTAGTCACCAAGGCAGGTAGTGTGATAAAT...ATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGACATCAAAGAATTGCTaGCCATTCCAGGGACAGGAT +
Preference number: 4 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEETSKNC*PFQGQD
Trigger: ATCCTGTCCCTGGAATGGGCAGCAATTCTTTGATGT...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343827.7
ENST00000537840.5
ENST00000543579.5
CDS-3UTR GCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGACATCAAAGAATTGCTaGCCATTCCAGGGACAGGAT +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYETSKNC*PFQGQD
Trigger: ATCCTGTCCCTGGAATGGGCAGCAATTCTTTGATGT...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343827.7
ENST00000537840.5
ENST00000543579.5
CDS-3UTR GCA 90 bp CAATGGTTGTCACTGCTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGAATACATCAAAGAATTaGTGCCCATTCCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: QWLSLLCSLHVNRFNVCWNTSKN*CPFQGQ
Trigger: CTGTCCCTGGAATGGGCAGCAATTCTTTGATGTATT...CCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAGCAGTGACAACCATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343827.7
CDS-3UTR GCA 90 bp CTTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTAATACATCAAAGAATTaGTGCCCATTCCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: LLPPVRFVSSDNLSCPSPNTSKN*CPFQGQ
Trigger: CTGTCCCTGGAATGGGCAGCAATTCTTTGATGTATT...AGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343827.7
ENST00000537840.5
CDS-3UTR GCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGAATACATCAAAGAATTaGTGCCCATTCCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLNTSKN*CPFQGQ
Trigger: CTGTCCCTGGAATGGGCAGCAATTCTTTGATGTATT...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343827.7
ENST00000537840.5
ENST00000543579.5
CDS-3UTR CCA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCCCACTATTAACAGGTaGGGAAAACATCGCACTGAA +
Preference number: 4 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITPTINR*GKHRTE
Trigger: TTCAGTGCGATGTTTTCCCCACCTGTTAATAGTGGG...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp AGGCTATGGTCACAGATGGTCTCTGCTTACCACTGTAAGGTAAATGTGCAAAGCGCTTCCCAGTGTAGTTaGTCTAGTTTTCCCACTATT +
Preference number: 4 (lower is better)
Translates to: RLWSQMVSAYHCKVNVQSASQCS*SSFPTI
Trigger: AATAGTGGGAAAACTAGACCAACTACACTGGGAAGC...GCTTTGCACATTTACCTTACAGTGGTAAGCAGAGACCATCTGTGACCATAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CCCTTCCTTTTTAAGACACTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTGCTTCCCAGTGTAGTTaGTCTAGTTTTCCCACTATT +
Preference number: 4 (lower is better)
Translates to: PFLFKTLIGMPGMLRANGASQCS*SSFPTI
Trigger: AATAGTGGGAAAACTAGACCAACTACACTGGGAAGC...ACCATTGGCCCTTAGCATTCCCGGCATACCTATTAGTGTCTTAAAAAGGAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGCGAACATACTGGTTaGTGGCTTAGGAGATGGATA +
Preference number: 4 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEESEHTG*WLRRWI
Trigger: TATCCATCTCCTAAGCCACCAACCAGTATGTTCGCT...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CCA 90 bp CATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGAGCGAACATACTGGTTaGTGGCTTAGGAGATGGATA +
Preference number: 4 (lower is better)
Translates to: HGLMFYLMSFLSSLLMEVSEHTG*WLRRWI
Trigger: TATCCATCTCCTAAGCCACCAACCAGTATGTTCGCT...CACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTAGCGAACATACTGGTTaGTGGCTTAGGAGATGGATA +
Preference number: 4 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITSEHTG*WLRRWI
Trigger: TATCCATCTCCTAAGCCACCAACCAGTATGTTCGCT...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CCA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGGGTTGCCATAACTACTaGATTGAGACATGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEEGCHNY*IETCGK
Trigger: CTTCCCACATGTCTCAATCCAGTAGTTATGGCAACC...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CCA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCGGTTGCCATAACTACTaGATTGAGACATGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: TVSDCAEATHCLQQKICCGCHNY*IETCGK
Trigger: CTTCCCACATGTCTCAATCCAGTAGTTATGGCAACC...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTGACAAGTACTGGTTTAATGCTAATCTGGCTCATCATTTTGGGACAGGGGCAGAAAGCTGGACATTGGTaGAAGACTCGTGTTTATGTC +
Preference number: 4 (lower is better)
Translates to: LTSTGLMLIWLIILGQGQKAGHW*KTRVYV
Trigger: GACATAAACACGAGTCTTCCACCAATGTCCAGCTTT...CTGCCCCTGTCCCAAAATGATGAGCCAGATTAGCATTAAACCAGTACTTGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGAAAGCTGGACATTGGTaGAAGACTCGTGTTTATGTC +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLKAGHW*KTRVYV
Trigger: GACATAAACACGAGTCTTCCACCAATGTCCAGCTTT...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CCA 90 bp CACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCATGAAAGCTGGACATTaGTGGAAGACTCGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: HVNRFNVCWHQLSVDQLSMKAGH*WKTRVY
Trigger: ATAAACACGAGTCTTCCACCAATGTCCAGCTTTCAT...GGAAAGCTGATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCATGAAAGCTGGACATTaGTGGAAGACTCGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: LIGMPGMLRANGCHCFVLMKAGH*WKTRVY
Trigger: ATAAACACGAGTCTTCCACCAATGTCCAGCTTTCAT...GAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATACCTATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTTTGCCGCGATGAAAGCTaGACATTGGTGGAAGACTCG +
Preference number: 4 (lower is better)
Translates to: LLMEVLTSCFDRRITFEFCRDES*TLVEDS
Trigger: CGAGTCTTCCACCAATGTCCAGCTTTCATCGCGGCA...AAACTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp AAGGAATTATTAAGCCAAGATACCTCCTTTAGCATGTTTTTCTCTCCCAGGGTTCGTAAGGTGAACTGCTaGTACTGCCGCGATGAAAGC +
Preference number: 4 (lower is better)
Translates to: KELLSQDTSFSMFFSPRVRKVNC*YCRDES
Trigger: GCTTTCATCGCGGCAGTACCAGCAGTTCACCTTACG...AACCCTGGGAGAGAAAAACATGCTAAAGGAGGTATCTTGGCTTAATAATTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp ATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGTCTTGTCGTAAGGTGAACTGCTaGTACTGCCGCGATGAAAGC +
Preference number: 4 (lower is better)
Translates to: MTDLLGIILIRVPEVLSCRKVNC*YCRDES
Trigger: GCTTTCATCGCGGCAGTACCAGCAGTTCACCTTACG...ACAAGACAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TTTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCCAGCAGCATTCCCTCTaGTTCCTAGAATGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: FVANISWADVLSDELPIFQQHSL*FLECCL
Trigger: CAGACAGCATTCTAGGAACCAGAGGGAATGCTGCTG...GAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAAACATCAGCAGCATTCCCTCTaGTTCCTAGAATGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SDCAEATHCLQQKICCKHQQHSL*FLECCL
Trigger: CAGACAGCATTCTAGGAACCAGAGGGAATGCTGCTG...ATGTTTGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGCAGCAGCATTCCCTCTaGTTCCTAGAATGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SLLMEVLTSCFDRRITFEQQHSL*FLECCL
Trigger: CAGACAGCATTCTAGGAACCAGAGGGAATGCTGCTG...CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATATTGAGGCTTCCAATTaGTGCATTATGGGATGGTCC +
Preference number: 4 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYIEASN*CIMGWS
Trigger: GGACCATCCCATAATGCACCAATTGGAAGCCTCAAT...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGATTGAGGCTTCCAATTaGTGCATTATGGGATGGTCC +
Preference number: 4 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEEIEASN*CIMGWS
Trigger: GGACCATCCCATAATGCACCAATTGGAAGCCTCAAT...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGATTGAGGCTTCCAATTaGTGCATTATGGGATGGTCC +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYEIEASN*CIMGWS
Trigger: GGACCATCCCATAATGCACCAATTGGAAGCCTCAAT...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp AGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAAACCTTGATATCTTTTTaGGAGGATTCATCATCTGAC +
Preference number: 4 (lower is better)
Translates to: SGEIETVSDCAEATHCLQTLISF*EDSSSD
Trigger: GTCAGATGATGAATCCTCCCAAAAAGATATCAAGGT...TTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCGTTGCAAACATCTCATaGGCTGATGTTCTATCTGAT +
Preference number: 4 (lower is better)
Translates to: LIGMPGMLRANGCHCFVLVANIS*ADVLSD
Trigger: ATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC...GAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATACCTATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAAACATAACTTCCACGGTGAGTaGAGAGATCGAGACAGTCTC +
Preference number: 4 (lower is better)
Translates to: SDCAEATHCLQQKICCKHNFHGE*RDRDSL
Trigger: GAGACTGTCTCGATCTCTCCACTCACCGTGGAAGTT...ATGTTTGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp CTTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTCGCTTTAATGTATGCTaGCATCAGCTGAGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: LLPPVRFVSSDNLSCPSPRFNVC*HQLSVD
Trigger: ATCTACACTCAGCTGATGCCAGCATACATTAAAGCG...AGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGAAAACGCTATTCATATaGCAAGAGGATAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLKTLFI*QEDRRG
Trigger: CCCTCTCCTATCCTCTTGCCATATGAATAGCGTTTT...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTGATTAACACTGAAATGAAGAACAAGGCCACAGATAGAGTCCGATGTAACTGGGGCTATGGTCACAGATaGTCTCTGCTTACCACTGTA +
Preference number: 4 (lower is better)
Translates to: LINTEMKNKATDRVRCNWGYGHR*SLLTTV
Trigger: TACAGTGGTAAGCAGAGACCATCTGTGACCATAGCC...CCAGTTACATCGGACTCTATCTGTGGCCTTGTTCTTCATTTCAGTGTTAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTGGCTATGGTCACAGATaGTCTCTGCTTACCACTGTA +
Preference number: 4 (lower is better)
Translates to: LSDELPIFTSDGSVDQLLGYGHR*SLLTTV
Trigger: TACAGTGGTAAGCAGAGACCATCTGTGACCATAGCC...AAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCACATTAACTTTTTCCCTATGCTAGCTAGGCTATaGTCACAGATGGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: CMLASAECRSAFHINFFPMLARL*SQMVSA
Trigger: AGCAGAGACCATCTGTGACCATAGCCTAGCTAGCAT...AGGGAAAAAGTTAATGTGGAAAGCTGATCTACACTCAGCTGATGCCAGCATACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGTGCCTTGGTGACTACTaGGTTTTGTTATGTTCACCA +
Preference number: 4 (lower is better)
Translates to: VLMRRGHLLSSLLITLELCLGDY*VLLCSP
Trigger: TGGTGAACATAACAAAACCCAGTAGTCACCAAGGCA...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGGTGAGTGGAGAGATCTGCCTTGGTGACTACTaGGTTTTGTTATGTTCACCA +
Preference number: 4 (lower is better)
Translates to: HLSIQFRHKATSTVSGEICLGDY*VLLCSP
Trigger: TGGTGAACATAACAAAACCCAGTAGTCACCAAGGCA...GATCTCTCCACTCACCGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTCTGGCTCATCATTTTaGGACAGGGGCAGATGGTTT +
Preference number: 4 (lower is better)
Translates to: FYLMSFLSSLLMEVLTSCSGSSF*DRGRWF
Trigger: AAACCATCTGCCCCTGTCCCAAAATGATGAGCCAGA...GCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp GCTGCACGGAGGAGGCTGGACTGTGACCATAAACTGTTCAGATTTAGAGATCAAGGTTTAATGCTAATCTaGCTCATCATTTTGGGACAG +
Preference number: 4 (lower is better)
Translates to: AARRRLDCDHKLFRFRDQGLMLI*LIILGQ
Trigger: CTGTCCCAAAATGATGAGCCAGATTAGCATTAAACC...TTGATCTCTAAATCTGAACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAAAAAGGCCAGGCAGTaGCATATGTTCACTCACACA +
Preference number: 4 (lower is better)
Translates to: TVSDCAEATHCLQQKICCKKARQ*HMFTHT
Trigger: TGTGTGAGTGAACATATGCCACTGCCTGGCCTTTTT...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CAATGGTTGTCACTGCTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGTTTTCCCATCAGATTTaGGTTCATGAAAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: QWLSLLCSLHVNRFNVCWFSHQI*VHERCW
Trigger: CCAACACCTTTCATGAACTCAAATCTGATGGGAAAA...CCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAGCAGTGACAACCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CAGGGTTGTTGTGGTGGAAGACAGGTTTCATGGAAGTTCAAAGTGATTATGTCTACTTGTAGCAGAGAATaGATAGTATGCTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: QGCCGGRQVSWKFKVIMSTCSRE*IVCCPR
Trigger: CCTGGGACAGCATACTATTCATTCTCTGCTACAAGT...AGACATAATCACTTTGAACTTCCATGAAACCTGTCTTCCACCACAACAACCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTACGGTTGAAATCATCTaGATTTGGGGATGGTGCATA +
Preference number: 4 (lower is better)
Translates to: SRQSLIVQKRHTACNKRFTVEII*IWGWCI
Trigger: TATGCACCATCCCCAAATTCAGATGATTTCAACCGT...AAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGACGGTTGAAATCATCTaGATTTGGGGATGGTGCATA +
Preference number: 4 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEETVEII*IWGWCI
Trigger: TATGCACCATCCCCAAATTCAGATGATTTCAACCGT...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR TCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGACGGTTGAAATCATCTaGATTTGGGGATGGTGCATA +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYETVEII*IWGWCI
Trigger: TATGCACCATCCCCAAATTCAGATGATTTCAACCGT...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR TCA 90 bp CAGGGTTGTTGTGGTGGAAGACAGGTTTCATGGAAGTTCAAAGTGATTATGTCTACTCAAGCGGTCATGTaGATGAAGGTTGCCATAACT +
Preference number: 4 (lower is better)
Translates to: QGCCGGRQVSWKFKVIMSTQAVM*MKVAIT
Trigger: AGTTATGGCAACCTTCATTCACATGACCGCTTGAGT...AGACATAATCACTTTGAACTTCCATGAAACCTGTCTTCCACCACAACAACCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTATGTATATCACTGTaGCCAGCAGGCAAACTGGTG +
Preference number: 4 (lower is better)
Translates to: LLQTSHGLMFYLMSFLSSLCISL*PAGKLV
Trigger: CACCAGTTTGCCTGCTGGTCACAGTGATATACATAG...TGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp TTTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCCTATGTATATCACTGTaGCCAGCAGGCAAACTGGTG +
Preference number: 4 (lower is better)
Translates to: FVANISWADVLSDELPIFLCISL*PAGKLV
Trigger: CACCAGTTTGCCTGCTGGTCACAGTGATATACATAG...GAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp TTTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACAGAGTCTTCCCGATaGGTTCCAACCATTGAAGCT +
Preference number: 4 (lower is better)
Translates to: FVANISWADVLSDELPIFTESSR*VPTIEA
Trigger: AGCTTCAATGGTTGGAACTCATCGGGAAGACTCTGT...GAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp TCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAAACATACAGAGTCTTCCCGATaGGTTCCAACCATTGAAGCT +
Preference number: 4 (lower is better)
Translates to: SDCAEATHCLQQKICCKHTESSR*VPTIEA
Trigger: AGCTTCAATGGTTGGAACTCATCGGGAAGACTCTGT...ATGTTTGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCCTAGACAGGACTGAATaGTTGCCATTGAGACTGACA +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSILDRTE*LPLRLT
Trigger: TGTCAGTCTCAATGGCAATCATTCAGTCCTGTCTAG...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp TTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCCTAGACAGGACTGAATaGTTGCCATTGAGACTGACA +
Preference number: 4 (lower is better)
Translates to: FYLMSFLSSLLMEVLTSCLDRTE*LPLRLT
Trigger: TGTCAGTCTCAATGGCAATCATTCAGTCCTGTCTAG...GCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTGTACTAGACAGGACTaGATGATTGCCATTGAGACT +
Preference number: 4 (lower is better)
Translates to: HGLMFYLMSFLSSLLMEVCTRQD*MIAIET
Trigger: AGTCTCAATGGCAATCATTCAGTCCTGTCTAGTACA...CACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGTGTACTAGACAGGACTaGATGATTGCCATTGAGACT +
Preference number: 4 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEECTRQD*MIAIET
Trigger: AGTCTCAATGGCAATCATTCAGTCCTGTCTAGTACA...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTTGTACTAGACAGGACTaGATGATTGCCATTGAGACT +
Preference number: 4 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITCTRQD*MIAIET
Trigger: AGTCTCAATGGCAATCATTCAGTCCTGTCTAGTACA...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCTGTACTAGACAGGACTaGATGATTGCCATTGAGACT +
Preference number: 4 (lower is better)
Translates to: TVSDCAEATHCLQQKICCCTRQD*MIAIET
Trigger: AGTCTCAATGGCAATCATTCAGTCCTGTCTAGTACA...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCATGTACTAGACAGGACTaGATGATTGCCATTGAGACT +
Preference number: 4 (lower is better)
Translates to: QSLIVQKRHTACNKRFVACTRQD*MIAIET
Trigger: AGTCTCAATGGCAATCATTCAGTCCTGTCTAGTACA...TGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CTGATTAACACTGAAATGAAGAACAAGGCCACAGATAGAGTCCGATGTAACTGGGTTCAGGTCTGTGCTTaGAGTAGTGACTGTACTAGA +
Preference number: 4 (lower is better)
Translates to: LINTEMKNKATDRVRCNWVQVCA*SSDCTR
Trigger: TCTAGTACAGTCACTACTTCAAGCACAGACCTGAAC...CCAGTTACATCGGACTCTATCTGTGGCCTTGTTCTTCATTTCAGTGTTAATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTGTTCAGGTCTGTGCTTaGAGTAGTGACTGTACTAGA +
Preference number: 4 (lower is better)
Translates to: VANISWADVLSDELPIFTVQVCA*SSDCTR
Trigger: TCTAGTACAGTCACTACTTCAAGCACAGACCTGAAC...AGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp TTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCGTTCAGGTCTGTGCTTaGAGTAGTGACTGTACTAGA +
Preference number: 4 (lower is better)
Translates to: FYLMSFLSSLLMEVLTSCVQVCA*SSDCTR
Trigger: TCTAGTACAGTCACTACTTCAAGCACAGACCTGAAC...GCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp TCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGACAACAGTTCCAGACTaGCTTTGCAAGCCACCTCTA +
Preference number: 4 (lower is better)
Translates to: SLLMEVLTSCFDRRITFETTVPD*LCKPPL
Trigger: TAGAGGTGGCTTGCAAAGTCAGTCTGGAACTGTTGT...CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp TCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTAACTCTGGAACTGGCTaGTGTTTACATATGACCCAT +
Preference number: 4 (lower is better)
Translates to: SRQSLIVQKRHTACNKRFNSGTG*CLHMTH
Trigger: ATGGGTCATATGTAAACATCAGCCAGTTCCAGAGTT...AAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGAACTCTGGAACTGGCTaGTGTTTACATATGACCCAT +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYENSGTG*CLHMTH
Trigger: ATGGGTCATATGTAAACATCAGCCAGTTCCAGAGTT...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTTGTCCAAGTCCTTATaGGGAGAGGTCACCTTCTAT +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSILSKSL*GEVTFY
Trigger: ATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAA...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CCCTTCCTTTTTAAGACACTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGTCTTCAGATAATCTaGGTTGTCCAAGTCCTTATG +
Preference number: 4 (lower is better)
Translates to: PFLFKTLIGMPGMLRANGCLQII*VVQVLM
Trigger: CATAAGGACTTGGACAACTCAGATTATCTGAAGACA...ACCATTGGCCCTTAGCATTCCCGGCATACCTATTAGTGTCTTAAAAAGGAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGTGTCTTCAGATAATCTaGGTTGTCCAAGTCCTTATG +
Preference number: 4 (lower is better)
Translates to: VLMRRGHLLSSLLITLELCLQII*VVQVLM
Trigger: CATAAGGACTTGGACAACTCAGATTATCTGAAGACA...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp TCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGCACTACCTGCCTTGGTaGCTACTGGGTTTTGTTATG +
Preference number: 4 (lower is better)
Translates to: SLLMEVLTSCFDRRITFEHYLPW*LLGFVM
Trigger: CATAACAAAACCCAGTAGTCACCAAGGCAGGTAGTG...CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAAACATCACTACCTGCCTTGGTaGCTACTGGGTTTTGTTATG +
Preference number: 4 (lower is better)
Translates to: SDCAEATHCLQQKICCKHHYLPW*LLGFVM
Trigger: CATAACAAAACCCAGTAGTCACCAAGGCAGGTAGTG...ATGTTTGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CTTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTCAGATGGTTTGCAGTTaGTTAAATCACCCACTCAAT +
Preference number: 4 (lower is better)
Translates to: LLPPVRFVSSDNLSCPSPQMVCS*LNHPLN
Trigger: ATTGAGTGGGTGATTTAATCAACTGCAAACCATCTG...AGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTCTTGCAAATGCTCGTaGAGTTGCTGCTCAACTCGA +
Preference number: 4 (lower is better)
Translates to: SLLMEVLTSCFDRRITFESCKCS*SCCSTR
Trigger: TCGAGTTGAGCAGCAACTTCACGAGCATTTGCAAGA...CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333725.10
ENST00000438423.6
ENST00000559703.1
CDS-3UTR TCA 90 bp TGGGATTCATTCTTCCAGACAATACGTGTAAGTTTACTTGACTGTGGAATGCCACAGCTATTGTCTCAGTaGCTTCAGAAGACCCTTTGG +
Preference number: 4 (lower is better)
Translates to: WDSFFQTIRVSLLDCGMPQLLSQ*LQKTLW
Trigger: CCAAAGGGTCTTCTGAAGTCACTGAGACAATAGCTG...TGGCATTCCACAGTCAAGTAAACTTACACGTATTGTCTGGAAGAATGAATCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560948.1
CDS-3UTR GCA 90 bp AAGGAATTATTAAGCCAAGATACCTCCTTTAGCATGTTTTTCTCTCCCAGGGTTCAACGTAAGGTGAACTaGTGGTACTGCCGCGATGAA +
Preference number: 4 (lower is better)
Translates to: KELLSQDTSFSMFFSPRVQRKVN*WYCRDE
Trigger: TTCATCGCGGCAGTACCAGCAGTTCACCTTACGTTG...AACCCTGGGAGAGAAAAACATGCTAAAGGAGGTATCTTGGCTTAATAATTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGAGGAGAATAAATAGATaGCAAAGCCTTTCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLRRINR*QSLSKC
Trigger: GCACTTGGAAAGGCTTTGGCATCTATTTATTCTCCT...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR GCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGTTGACGGAAAACTACTaGTGGTATGGTCAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYELTENY*WYGQEN
Trigger: ATTCTCCTGACCATACCAGCAGTAGTTTTCCGTCAA...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR GCA 90 bp TTTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCGAGGCTTCCAATTGGTaGATTATGGGATGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: FVANISWADVLSDELPIFEASNW*IMGWSQ
Trigger: TTGGGACCATCCCATAATGCACCAATTGGAAGCCTC...GAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp GCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACTTGAAGCTGATCGACTaGTTGCAACAAGGCTTGATC +
Preference number: 4 (lower is better)
Translates to: ADVLSDELPIFTSDGSVDLKLID*LQQGLI
Trigger: GATCAAGCCTTGTTGCAAGCAGTCGATCAGCTTCAA...GTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGCCAAGCTCTTTGAATaGTTCATTAATATCCCGCAC +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYEAKLFE*FINIPH
Trigger: GTGCGGGATATTAATGAAGCATTCAAAGAGCTTGGC...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCTTCCTCTCTCTGACTTaGTGTTCTAGACTAAGGATG +
Preference number: 4 (lower is better)
Translates to: TVSDCAEATHCLQQKICCFLSLT*CSRLRM
Trigger: CATCCTTAGTCTAGAACAGCAAGTCAGAGAGAGGAA...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGTTCCTCTCTCTGACTTaGTGTTCTAGACTAAGGATG +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYEFLSLT*CSRLRM
Trigger: CATCCTTAGTCTAGAACAGCAAGTCAGAGAGAGGAA...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATTTCCTCTCTCTGACTTaGTGTTCTAGACTAAGGATG +
Preference number: 4 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYFLSLT*CSRLRM
Trigger: CATCCTTAGTCTAGAACAGCAAGTCAGAGAGAGGAA...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp CATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTCCTCTCTCTGACTTaGTGTTCTAGACTAAGGATG +
Preference number: 4 (lower is better)
Translates to: HGLMFYLMSFLSSLLMEVFLSLT*CSRLRM
Trigger: CATCCTTAGTCTAGAACAGCAAGTCAGAGAGAGGAA...CACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp TTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCATCTCTTAAGGCAGGCTaGTTTGGGGTTAAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: LLQTSHGLMFYLMSFLSSSLKAG*FGVKVP
Trigger: AGGAACCTTAACCCCAAAGCAGCCTGCCTTAAGAGA...TGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp TCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTCTCTTAAGGCAGGCTaGTTTGGGGTTAAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: SLLMEVLTSCFDRRITFESLKAG*FGVKVP
Trigger: AGGAACCTTAACCCCAAAGCAGCCTGCCTTAAGAGA...CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCATTTATCACACTACCTaGCTTGGTGACTACTGGGTT +
Preference number: 4 (lower is better)
Translates to: TVSDCAEATHCLQQKICCIYHTT*LGDYWV
Trigger: AACCCAGTAGTCACCAAGGCAGGTAGTGTGATAAAT...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp AAGCTACATAGTGATTTGGGTCCTTTCCTCTGTGTGCTGATTGCCACTGTTGATATTTATCACACTACCTaGCTTGGTGACTACTGGGTT +
Preference number: 4 (lower is better)
Translates to: KLHSDLGPFLCVLIATVDIYHTT*LGDYWV
Trigger: AACCCAGTAGTCACCAAGGCAGGTAGTGTGATAAAT...ATCAACAGTGGCAATCAGCACACAGAGGAAAGGACCCAAATCACTATGTAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGGTGAGTGGAGAGATCAATACGGGTGACCATTaGTCTTGTATTCCATTAGGT +
Preference number: 4 (lower is better)
Translates to: HLSIQFRHKATSTVSGEINTGDH*SCIPLG
Trigger: ACCTAATGGAATACAAGAGCAATGGTCACCCGTATT...GATCTCTCCACTCACCGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp AAGGAATTATTAAGCCAAGATACCTCCTTTAGCATGTTTTTCTCTCCCAGGGTTAGAGGATGTGACAATTaGCATGGGTTTCGCACGCAC +
Preference number: 4 (lower is better)
Translates to: KELLSQDTSFSMFFSPRVRGCDN*HGFRTH
Trigger: GTGCGTGCGAAACCCATGGCAATTGTCACATCCTCT...AACCCTGGGAGAGAAAAACATGCTAAAGGAGGTATCTTGGCTTAATAATTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR GCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCACATCAAAGAATTGCTaGCCATTCCAGGGACAGGAT +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSITSKNC*PFQGQD
Trigger: ATCCTGTCCCTGGAATGGGCAGCAATTCTTTGATGT...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343827.7
ENST00000537840.5
ENST00000543579.5
CDS-3UTR GCA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGTGGAGGATAACTCTTaGATAAAGAAAGTGCTAGCG +
Preference number: 4 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYVEDNS*IKKVLA
Trigger: CGCTAGCACTTTCTTTATGCAAGAGTTATCCTCCAC...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537840.5
CDS-3UTR GCA 90 bp ACTAAACACAGCAACTTTATGGGATTGTATCCAGATTACATAAGCCCACACCAGTACTTGACTGTGGAATaGCAAGGGAGAAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: TKHSNFMGLYPDYISPHQYLTVE*QGRRNC
Trigger: GCAGTTCCTTCTCCCTTGGCATTCCACAGTCAAGTA...CTGGTGTGGGCTTATGTAATCTGGATACAATCCCATAAAGTTGCTGTGTTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560948.1
CDS-3UTR CCA 90 bp TGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCACATTAACTTTTTCCCTCCCACTATTAACAGGTaGGGAAAACATCGCACTGAA +
Preference number: 4 (lower is better)
Translates to: CMLASAECRSAFHINFFPPTINR*GKHRTE
Trigger: TTCAGTGCGATGTTTTCCCCACCTGTTAATAGTGGG...AGGGAAAAAGTTAATGTGGAAAGCTGATCTACACTCAGCTGATGCCAGCATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGCTTCCCAGTGTAGTTaGTCTAGTTTTCCCACTATT +
Preference number: 4 (lower is better)
Translates to: SRQSLIVQKRHTACNKRFASQCS*SSFPTI
Trigger: AATAGTGGGAAAACTAGACCAACTACACTGGGAAGC...AAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TCACAAATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGGTTCATGAAAGGTGTTaGGGACAAGCCTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: SQMTDLLGIILIRVPEVLVHERC*GQAFMG
Trigger: GCCCATGAAGGCTTGTCCCCAACACCTTTCATGAAC...CAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCATTTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp AAGGAATTATTAAGCCAAGATACCTCCTTTAGCATGTTTTTCTCTCCCAGGGTTGTTCATGAAAGGTGTTaGGGACAAGCCTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: KELLSQDTSFSMFFSPRVVHERC*GQAFMG
Trigger: GCCCATGAAGGCTTGTCCCCAACACCTTTCATGAAC...AACCCTGGGAGAGAAAAACATGCTAAAGGAGGTATCTTGGCTTAATAATTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAACATACTGGTTGGTaGCTTAGGAGATGGATAACT +
Preference number: 4 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYEHTGW*LRRWIT
Trigger: AGTTATCCATCTCCTAAGCCACCAACCAGTATGTTC...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
CDS-3UTR CCA 90 bp TGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCACATTAACTTTTTCCCTAGCGAACATACTGGTTaGTGGCTTAGGAGATGGATA +
Preference number: 4 (lower is better)
Translates to: CMLASAECRSAFHINFFPSEHTG*WLRRWI
Trigger: TATCCATCTCCTAAGCCACCAACCAGTATGTTCGCT...AGGGAAAAAGTTAATGTGGAAAGCTGATCTACACTCAGCTGATGCCAGCATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACCACCAAAACCAGGCTaGCTCATCCCATTTGATGAA +
Preference number: 4 (lower is better)
Translates to: LLQTSHGLMFYLMSFLSSPPKPG*LIPFDE
Trigger: TTCATCAAATGGGATGAGCCAGCCTGGTTTTGGTGG...TGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCACATTAACTTTTTCCCTGGTTGCCATAACTACTaGATTGAGACATGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: CMLASAECRSAFHINFFPGCHNY*IETCGK
Trigger: CTTCCCACATGTCTCAATCCAGTAGTTATGGCAACC...AGGGAAAAAGTTAATGTGGAAAGCTGATCTACACTCAGCTGATGCCAGCATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCGGTTGCCATAACTACTaGATTGAGACATGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSIGCHNY*IETCGK
Trigger: CTTCCCACATGTCTCAATCCAGTAGTTATGGCAACC...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CCA 90 bp CAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAAAAGCTGGACATTGGTaGAAGACTCGTGTTTATGTC +
Preference number: 4 (lower is better)
Translates to: QSLIVQKRHTACNKRFVAKAGHW*KTRVYV
Trigger: GACATAAACACGAGTCTTCCACCAATGTCCAGCTTT...TGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGAAAGCTGGACATTGGTaGAAGACTCGTGTTTATGTC +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYEKAGHW*KTRVYV
Trigger: GACATAAACACGAGTCTTCCACCAATGTCCAGCTTT...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CCA 90 bp CTGACAAGTACTGGTTTAATGCTAATCTGGCTCATCATTTTGGGACAGGGGCAGATGAAAGCTGGACATTaGTGGAAGACTCGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: LTSTGLMLIWLIILGQGQMKAGH*WKTRVY
Trigger: ATAAACACGAGTCTTCCACCAATGTCCAGCTTTCAT...CTGCCCCTGTCCCAAAATGATGAGCCAGATTAGCATTAAACCAGTACTTGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGATGAAAGCTGGACATTaGTGGAAGACTCGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLMKAGH*WKTRVY
Trigger: ATAAACACGAGTCTTCCACCAATGTCCAGCTTTCAT...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CCA 90 bp TGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATATGAAAGCTGGACATTaGTGGAAGACTCGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: CSLHVNRFNVCWHQLSVDMKAGH*WKTRVY
Trigger: ATAAACACGAGTCTTCCACCAATGTCCAGCTTTCAT...ATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAACGGAAAACTACTGCTaGTATGGTCAGGAGAATAAA +
Preference number: 4 (lower is better)
Translates to: LCSLHVNRFNVCWHQLSVTENYC*YGQENK
Trigger: TTTATTCTCCTGACCATACCAGCAGTAGTTTTCCGT...TACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CCCTTCCTTTTTAAGACACTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTCCAATTGGTGCATTATaGGATGGTCCCAATAAACTA +
Preference number: 4 (lower is better)
Translates to: PFLFKTLIGMPGMLRANGPIGAL*DGPNKL
Trigger: TAGTTTATTGGGACCATCCCATAATGCACCAATTGG...ACCATTGGCCCTTAGCATTCCCGGCATACCTATTAGTGTCTTAAAAAGGAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGCCAATTGGTGCATTATaGGATGGTCCCAATAAACTA +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLPIGAL*DGPNKL
Trigger: TAGTTTATTGGGACCATCCCATAATGCACCAATTGG...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp AGGCTATGGTCACAGATGGTCTCTGCTTACCACTGTAAGGTAAATGTGCAAAGCCCAATTGGTGCATTATaGGATGGTCCCAATAAACTA +
Preference number: 4 (lower is better)
Translates to: RLWSQMVSAYHCKVNVQSPIGAL*DGPNKL
Trigger: TAGTTTATTGGGACCATCCCATAATGCACCAATTGG...GCTTTGCACATTTACCTTACAGTGGTAAGCAGAGACCATCTGTGACCATAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTACCAATTGGTGCATTATaGGATGGTCCCAATAAACTA +
Preference number: 4 (lower is better)
Translates to: LCSLHVNRFNVCWHQLSVPIGAL*DGPNKL
Trigger: TAGTTTATTGGGACCATCCCATAATGCACCAATTGG...TACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp CAGGGTTGTTGTGGTGGAAGACAGGTTTCATGGAAGTTCAAAGTGATTATGTCTATTGAGGCTTCCAATTaGTGCATTATGGGATGGTCC +
Preference number: 4 (lower is better)
Translates to: QGCCGGRQVSWKFKVIMSIEASN*CIMGWS
Trigger: GGACCATCCCATAATGCACCAATTGGAAGCCTCAAT...AGACATAATCACTTTGAACTTCCATGAAACCTGTCTTCCACCACAACAACCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGCGCTTTAATGTATGCTaGCATCAGCTGAGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEERFNVC*HQLSVD
Trigger: ATCTACACTCAGCTGATGCCAGCATACATTAAAGCG...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCCGCTTTAATGTATGCTaGCATCAGCTGAGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: TVSDCAEATHCLQQKICCRFNVC*HQLSVD
Trigger: ATCTACACTCAGCTGATGCCAGCATACATTAAAGCG...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGCGCTTTAATGTATGCTaGCATCAGCTGAGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYERFNVC*HQLSVD
Trigger: ATCTACACTCAGCTGATGCCAGCATACATTAAAGCG...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp TTTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCATGCTAGCTAGGCTATaGTCACAGATGGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: FVANISWADVLSDELPIFMLARL*SQMVSA
Trigger: AGCAGAGACCATCTGTGACCATAGCCTAGCTAGCAT...GAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAAACATTCTGGCTCATCATTTTaGGACAGGGGCAGATGGTTT +
Preference number: 4 (lower is better)
Translates to: SDCAEATHCLQQKICCKHSGSSF*DRGRWF
Trigger: AAACCATCTGCCCCTGTCCCAAAATGATGAGCCAGA...ATGTTTGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATGGTTTAATGCTAATCTaGCTCATCATTTTGGGACAG +
Preference number: 4 (lower is better)
Translates to: CSLHVNRFNVCWHQLSVDGLMLI*LIILGQ
Trigger: CTGTCCCAAAATGATGAGCCAGATTAGCATTAAACC...ATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTGACAAGTACTGGTTTAATGCTAATCTGGCTCATCATTTTGGGACAGGGGCAGTGGACTGACAAGTACTaGTTTAATGCTAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: LTSTGLMLIWLIILGQGQWTDKY*FNANLA
Trigger: AGCCAGATTAGCATTAAACCAGTACTTGTCAGTCCA...CTGCCCCTGTCCCAAAATGATGAGCCAGATTAGCATTAAACCAGTACTTGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTGATTAACACTGAAATGAAGAACAAGGCCACAGATAGAGTCCGATGTAACTGGAAAAAGGCCAGGCAGTaGCATATGTTCACTCACACA +
Preference number: 4 (lower is better)
Translates to: LINTEMKNKATDRVRCNWKKARQ*HMFTHT
Trigger: TGTGTGAGTGAACATATGCCACTGCCTGGCCTTTTT...CCAGTTACATCGGACTCTATCTGTGGCCTTGTTCTTCATTTCAGTGTTAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp GTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTAAAAAGGCCAGGCAGTaGCATATGTTCACTCACACA +
Preference number: 4 (lower is better)
Translates to: VANISWADVLSDELPIFTKKARQ*HMFTHT
Trigger: TGTGTGAGTGAACATATGCCACTGCCTGGCCTTTTT...AGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTTTTGAGGTTCTTGCTTaGCATGAAGTCCTCATGGAT +
Preference number: 4 (lower is better)
Translates to: SRQSLIVQKRHTACNKRFFEVLA*HEVLMD
Trigger: ATCCATGAGGACTTCATGCCAAGCAAGAACCTCAAA...AAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR CCA 90 bp CATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTTGAGGTTCTTGCTTaGCATGAAGTCCTCATGGAT +
Preference number: 4 (lower is better)
Translates to: HGLMFYLMSFLSSLLMEVFEVLA*HEVLMD
Trigger: ATCCATGAGGACTTCATGCCAAGCAAGAACCTCAAA...CACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
3UTR CAA 72 bp TGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTaGCAAACATCTCATGGGCTGATGTTCTATCTGATG +
Preference number: 4 (lower is better)
Translates to: CRSDTLLATKDL*QTSHGLMFYLM
Trigger: CATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
3UTR CAA 72 bp ATACCTCCTTTAGCATGTTTTTCTCTCCCAGGGTTGTaGTGGTGGAAGACAGGTTTCATGGAAGTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: IPPLACFSLPGL*WWKTGFMEVQS
Trigger: ACTTTGAACTTCCATGAAACCTGTCTTCCACCACAACAACCCTGGGAGAGAAAAACATGCTAAAGGAGGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTACGGTTGAAATCATCTaGATTTGGGGATGGTGCATA +
Preference number: 4 (lower is better)
Translates to: LSDELPIFTSDGSVDQLLTVEII*IWGWCI
Trigger: TATGCACCATCCCCAAATTCAGATGATTTCAACCGT...AAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TCACAAATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGCTATGTATATCACTGTaGCCAGCAGGCAAACTGGTG +
Preference number: 4 (lower is better)
Translates to: SQMTDLLGIILIRVPEVLLCISL*PAGKLV
Trigger: CACCAGTTTGCCTGCTGGTCACAGTGATATACATAG...CAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCATTTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTGTACTAGACAGGACTaGATGATTGCCATTGAGACT +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSICTRQD*MIAIET
Trigger: AGTCTCAATGGCAATCATTCAGTCCTGTCTAGTACA...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp TTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCAGTTCAGGTCTGTGCTTaGAGTAGTGACTGTACTAGA +
Preference number: 4 (lower is better)
Translates to: LLQTSHGLMFYLMSFLSSVQVCA*SSDCTR
Trigger: TCTAGTACAGTCACTACTTCAAGCACAGACCTGAAC...TGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCAACTCTGGAACTGGCTaGTGTTTACATATGACCCAT +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSINSGTG*CLHMTH
Trigger: ATGGGTCATATGTAAACATCAGCCAGTTCCAGAGTT...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp TTTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCTTGTCCAAGTCCTTATaGGGAGAGGTCACCTTCTAT +
Preference number: 4 (lower is better)
Translates to: FVANISWADVLSDELPIFLSKSL*GEVTFY
Trigger: ATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAA...GAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATTGTCTTCAGATAATCTaGGTTGTCCAAGTCCTTATG +
Preference number: 4 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYCLQII*VVQVLM
Trigger: CATAAGGACTTGGACAACTCAGATTATCTGAAGACA...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGTGTCTTCAGATAATCTaGGTTGTCCAAGTCCTTATG +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYECLQII*VVQVLM
Trigger: CATAAGGACTTGGACAACTCAGATTATCTGAAGACA...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp TTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGTTCTCTGCACGTaGACCGCTTTAATGTATGCT +
Preference number: 4 (lower is better)
Translates to: FYLMSFLSSLLMEVLTSCFVLCT*TALMYA
Trigger: AGCATACATTAAAGCGGTTCACGTGCAGAGAACAAA...GCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR TCA 90 bp GATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTTGTTCTCTGCACGTaGACCGCTTTAATGTATGCT +
Preference number: 4 (lower is better)
Translates to: DVLSDELPIFTSDGSVDQFVLCT*TALMYA
Trigger: AGCATACATTAAAGCGGTTCACGTGCAGAGAACAAA...CTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR TCA 90 bp GTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTATAAGGAAATACGGGTaGCCATTGCTCTTGTATTCC +
Preference number: 4 (lower is better)
Translates to: VANISWADVLSDELPIFTIRKYG*PLLLYS
Trigger: GGAATACAAGAGCAATGGTCACCCGTATTTCCTTAT...AGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGCAGATGGTTTGCAGTTaGTTAAATCACCCACTCAAT +
Preference number: 4 (lower is better)
Translates to: HGLMFYLMSFLSSLLMEVQMVCS*LNHPLN
Trigger: ATTGAGTGGGTGATTTAATCAACTGCAAACCATCTG...CACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CTGACAAGTACTGGTTTAATGCTAATCTGGCTCATCATTTTGGGACAGGGGCAGAAGTTCACAAATGACTaGCTTGTTAGGAATCATCCT +
Preference number: 4 (lower is better)
Translates to: LTSTGLMLIWLIILGQGQKFTND*LVRNHP
Trigger: AGGATGATTCCTAACAAGTCAGTCATTTGTGAACTT...CTGCCCCTGTCCCAAAATGATGAGCCAGATTAGCATTAAACCAGTACTTGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTTCATACCAAGAGGATGTaGCAATTGCCATGGGTTTCG +
Preference number: 4 (lower is better)
Translates to: LLMEVLTSCFDRRITFEFHTKRM*QLPWVS
Trigger: CGAAACCCATGGCAATTGTCACATCCTCTTGGTATG...AAACTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR GCA 90 bp CTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTGTAATCCAGTATCTCTaGTGTACAGGGAAAATGAGC +
Preference number: 4 (lower is better)
Translates to: LSDELPIFTSDGSVDQLLVIQYL*CTGKMS
Trigger: GCTCATTTTCCCTGTACAGCAGAGATACTGGATTAC...AAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp TCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTCATGTGAATGAAGGTTaGCATAACTACTGGATTGAG +
Preference number: 4 (lower is better)
Translates to: SRQSLIVQKRHTACNKRFHVNEG*HNYWIE
Trigger: CTCAATCCAGTAGTTATGGCAACCTTCATTCACATG...AAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGCATGTGAATGAAGGTTaGCATAACTACTGGATTGAG +
Preference number: 4 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEEHVNEG*HNYWIE
Trigger: CTCAATCCAGTAGTTATGGCAACCTTCATTCACATG...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000543579.5
ENST00000557843.5
CDS-3UTR GCA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCCATGTGAATGAAGGTTaGCATAACTACTGGATTGAG +
Preference number: 4 (lower is better)
Translates to: TVSDCAEATHCLQQKICCHVNEG*HNYWIE
Trigger: CTCAATCCAGTAGTTATGGCAACCTTCATTCACATG...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATAGGAGAATAAATAGATaGCAAAGCCTTTCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYRRINR*QSLSKC
Trigger: GCACTTGGAAAGGCTTTGGCATCTATTTATTCTCCT...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
CDS-3UTR GCA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTAGGAGAATAAATAGATaGCAAAGCCTTTCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITRRINR*QSLSKC
Trigger: GCACTTGGAAAGGCTTTGGCATCTATTTATTCTCCT...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR GCA 90 bp TGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCACATTAACTTTTTCCCTTTGACGGAAAACTACTaGTGGTATGGTCAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: CMLASAECRSAFHINFFPLTENY*WYGQEN
Trigger: ATTCTCCTGACCATACCAGCAGTAGTTTTCCGTCAA...AGGGAAAAAGTTAATGTGGAAAGCTGATCTACACTCAGCTGATGCCAGCATACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp CTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTTGAGGCTTCCAATTGGTaGATTATGGGATGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: LLMEVLTSCFDRRITFEFEASNW*IMGWSQ
Trigger: TTGGGACCATCCCATAATGCACCAATTGGAAGCCTC...AAACTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp TCACAAATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGGAGGCTTCCAATTGGTaGATTATGGGATGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: SQMTDLLGIILIRVPEVLEASNW*IMGWSQ
Trigger: TTGGGACCATCCCATAATGCACCAATTGGAAGCCTC...CAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCATTTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp TCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTGAAGCTGATCGACTaGTTGCAACAAGGCTTGATC +
Preference number: 4 (lower is better)
Translates to: SLLMEVLTSCFDRRITFELKLID*LQQGLI
Trigger: GATCAAGCCTTGTTGCAAGCAGTCGATCAGCTTCAA...CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp TTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCATTGAAGCTGATCGACTaGTTGCAACAAGGCTTGATC +
Preference number: 4 (lower is better)
Translates to: LLQTSHGLMFYLMSFLSSLKLID*LQQGLI
Trigger: GATCAAGCCTTGTTGCAAGCAGTCGATCAGCTTCAA...TGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCGCCAAGCTCTTTGAATaGTTCATTAATATCCCGCAC +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSIAKLFE*FINIPH
Trigger: GTGCGGGATATTAATGAAGCATTCAAAGAGCTTGGC...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp CTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTGCCAAGCTCTTTGAATaGTTCATTAATATCCCGCAC +
Preference number: 4 (lower is better)
Translates to: LSDELPIFTSDGSVDQLLAKLFE*FINIPH
Trigger: GTGCGGGATATTAATGAAGCATTCAAAGAGCTTGGC...AAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTGAAGTGTTGACCAGTTaGTTTGATCGTAGGATTACA +
Preference number: 4 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITEVLTS*FDRRIT
Trigger: TGTAATCCTACGATCAAAGCAACTGGTCAACACTTC...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp CAGGGTTGTTGTGGTGGAAGACAGGTTTCATGGAAGTTCAAAGTGATTATGTCTAACCGCTTTAATGTATaGTGGCATCAGCTGAGTGTA +
Preference number: 4 (lower is better)
Translates to: QGCCGGRQVSWKFKVIMSNRFNV*WHQLSV
Trigger: TACACTCAGCTGATGCCAGCATACATTAAAGCGGTT...AGACATAATCACTTTGAACTTCCATGAAACCTGTCTTCCACCACAACAACCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp CTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATATTTATCACACTACCTaGCTTGGTGACTACTGGGTT +
Preference number: 4 (lower is better)
Translates to: LMSFLSSLLMEVLTSCFDIYHTT*LGDYWV
Trigger: AACCCAGTAGTCACCAAGGCAGGTAGTGTGATAAAT...ATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp AAGCTACATAGTGATTTGGGTCCTTTCCTCTGTGTGCTGATTGCCACTGTTGATAATACGGGTGACCATTaGTCTTGTATTCCATTAGGT +
Preference number: 4 (lower is better)
Translates to: KLHSDLGPFLCVLIATVDNTGDH*SCIPLG
Trigger: ACCTAATGGAATACAAGAGCAATGGTCACCCGTATT...ATCAACAGTGGCAATCAGCACACAGAGGAAAGGACCCAAATCACTATGTAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp AAGGAATTATTAAGCCAAGATACCTCCTTTAGCATGTTTTTCTCTCCCAGGGTTCCAAGAGAAGCAATCTaGCAGCATACCAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: KELLSQDTSFSMFFSPRVPREAI*QHTKRM
Trigger: CATCCTCTTGGTATGCTGGCAGATTGCTTCTCTTGG...AACCCTGGGAGAGAAAAACATGCTAAAGGAGGTATCTTGGCTTAATAATTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR CCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCGCTTCCCAGTGTAGTTaGTCTAGTTTTCCCACTATT +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSIASQCS*SSFPTI
Trigger: AATAGTGGGAAAACTAGACCAACTACACTGGGAAGC...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATGAACATACTGGTTGGTaGCTTAGGAGATGGATAACT +
Preference number: 4 (lower is better)
Translates to: LMSFLSSLLMEVLTSCFDEHTGW*LRRWIT
Trigger: AGTTATCCATCTCCTAAGCCACCAACCAGTATGTTC...ATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTGAACATACTGGTTGGTaGCTTAGGAGATGGATAACT +
Preference number: 4 (lower is better)
Translates to: LSDELPIFTSDGSVDQLLEHTGW*LRRWIT
Trigger: AGTTATCCATCTCCTAAGCCACCAACCAGTATGTTC...AAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCGAACATACTGGTTGGTaGCTTAGGAGATGGATAACT +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSIEHTGW*LRRWIT
Trigger: AGTTATCCATCTCCTAAGCCACCAACCAGTATGTTC...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CCA 90 bp TTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCGAACATACTGGTTGGTaGCTTAGGAGATGGATAACT +
Preference number: 4 (lower is better)
Translates to: FYLMSFLSSLLMEVLTSCEHTGW*LRRWIT
Trigger: AGTTATCCATCTCCTAAGCCACCAACCAGTATGTTC...GCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTTCCACCAAAACCAGGCTaGCTCATCCCATTTGATGAA +
Preference number: 4 (lower is better)
Translates to: LLMEVLTSCFDRRITFEFPPKPG*LIPFDE
Trigger: TTCATCAAATGGGATGAGCCAGCCTGGTTTTGGTGG...AAACTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGGGTTGCCATAACTACTaGATTGAGACATGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SLLMEVLTSCFDRRITFEGCHNY*IETCGK
Trigger: CTTCCCACATGTCTCAATCCAGTAGTTATGGCAACC...CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp GTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTAAAGCTGGACATTGGTaGAAGACTCGTGTTTATGTC +
Preference number: 4 (lower is better)
Translates to: VANISWADVLSDELPIFTKAGHW*KTRVYV
Trigger: GACATAAACACGAGTCTTCCACCAATGTCCAGCTTT...AGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CAGGGTTGTTGTGGTGGAAGACAGGTTTCATGGAAGTTCAAAGTGATTATGTCTAAAGCTGGACATTGGTaGAAGACTCGTGTTTATGTC +
Preference number: 4 (lower is better)
Translates to: QGCCGGRQVSWKFKVIMSKAGHW*KTRVYV
Trigger: GACATAAACACGAGTCTTCCACCAATGTCCAGCTTT...AGACATAATCACTTTGAACTTCCATGAAACCTGTCTTCCACCACAACAACCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp AAGCTACATAGTGATTTGGGTCCTTTCCTCTGTGTGCTGATTGCCACTGTTGATATGAAAGCTGGACATTaGTGGAAGACTCGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: KLHSDLGPFLCVLIATVDMKAGH*WKTRVY
Trigger: ATAAACACGAGTCTTCCACCAATGTCCAGCTTTCAT...ATCAACAGTGGCAATCAGCACACAGAGGAAAGGACCCAAATCACTATGTAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTATGAAAGCTGGACATTaGTGGAAGACTCGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITMKAGH*WKTRVY
Trigger: ATAAACACGAGTCTTCCACCAATGTCCAGCTTTCAT...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CCA 90 bp CATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGACGGAAAACTACTGCTaGTATGGTCAGGAGAATAAA +
Preference number: 4 (lower is better)
Translates to: HGLMFYLMSFLSSLLMEVTENYC*YGQENK
Trigger: TTTATTCTCCTGACCATACCAGCAGTAGTTTTCCGT...CACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATACGGAAAACTACTGCTaGTATGGTCAGGAGAATAAA +
Preference number: 4 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYTENYC*YGQENK
Trigger: TTTATTCTCCTGACCATACCAGCAGTAGTTTTCCGT...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
CDS-3UTR CCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGACGGAAAACTACTGCTaGTATGGTCAGGAGAATAAA +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYETENYC*YGQENK
Trigger: TTTATTCTCCTGACCATACCAGCAGTAGTTTTCCGT...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGCCAATTGGTGCATTATaGGATGGTCCCAATAAACTA +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYEPIGAL*DGPNKL
Trigger: TAGTTTATTGGGACCATCCCATAATGCACCAATTGG...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCACCAATTGGTGCATTATaGGATGGTCCCAATAAACTA +
Preference number: 4 (lower is better)
Translates to: QSLIVQKRHTACNKRFVAPIGAL*DGPNKL
Trigger: TAGTTTATTGGGACCATCCCATAATGCACCAATTGG...TGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp TCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGATTGAGGCTTCCAATTaGTGCATTATGGGATGGTCC +
Preference number: 4 (lower is better)
Translates to: SLLMEVLTSCFDRRITFEIEASN*CIMGWS
Trigger: GGACCATCCCATAATGCACCAATTGGAAGCCTCAAT...CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp TGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATACCTTGATATCTTTTTaGGAGGATTCATCATCTGAC +
Preference number: 4 (lower is better)
Translates to: CSLHVNRFNVCWHQLSVDTLISF*EDSSSD
Trigger: GTCAGATGATGAATCCTCCCAAAAAGATATCAAGGT...ATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGACCTTGATATCTTTTTaGGAGGATTCATCATCTGAC +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLTLISF*EDSSSD
Trigger: GTCAGATGATGAATCCTCCCAAAAAGATATCAAGGT...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAGTTGCAAACATCTCATaGGCTGATGTTCTATCTGAT +
Preference number: 4 (lower is better)
Translates to: QSLIVQKRHTACNKRFVAVANIS*ADVLSD
Trigger: ATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC...TGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTGTTGCAAACATCTCATaGGCTGATGTTCTATCTGAT +
Preference number: 4 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITVANIS*ADVLSD
Trigger: ATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CTGATTAACACTGAAATGAAGAACAAGGCCACAGATAGAGTCCGATGTAACTGGTGCCTTGGTGACTACTaGGTTTTGTTATGTTCACCA +
Preference number: 4 (lower is better)
Translates to: LINTEMKNKATDRVRCNWCLGDY*VLLCSP
Trigger: TGGTGAACATAACAAAACCCAGTAGTCACCAAGGCA...CCAGTTACATCGGACTCTATCTGTGGCCTTGTTCTTCATTTCAGTGTTAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CAGGGTTGTTGTGGTGGAAGACAGGTTTCATGGAAGTTCAAAGTGATTATGTCTTGCCTTGGTGACTACTaGGTTTTGTTATGTTCACCA +
Preference number: 4 (lower is better)
Translates to: QGCCGGRQVSWKFKVIMSCLGDY*VLLCSP
Trigger: TGGTGAACATAACAAAACCCAGTAGTCACCAAGGCA...AGACATAATCACTTTGAACTTCCATGAAACCTGTCTTCCACCACAACAACCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TCACAAATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGTCTGGCTCATCATTTTaGGACAGGGGCAGATGGTTT +
Preference number: 4 (lower is better)
Translates to: SQMTDLLGIILIRVPEVLSGSSF*DRGRWF
Trigger: AAACCATCTGCCCCTGTCCCAAAATGATGAGCCAGA...CAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCATTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCATGGACTGACAAGTACTaGTTTAATGCTAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: QSLIVQKRHTACNKRFVAWTDKY*FNANLA
Trigger: AGCCAGATTAGCATTAAACCAGTACTTGTCAGTCCA...TGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGGAAGACAGGTTTCATaGAAGTTCAAAGTGATTATG +
Preference number: 4 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLGRQVS*KFKVIM
Trigger: CATAATCACTTTGAACTTCCATGAAACCTGTCTTCC...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCAAAAAAGGCCAGGCAGTaGCATATGTTCACTCACACA +
Preference number: 4 (lower is better)
Translates to: LLQTSHGLMFYLMSFLSSKKARQ*HMFTHT
Trigger: TGTGTGAGTGAACATATGCCACTGCCTGGCCTTTTT...TGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CCCTTCCTTTTTAAGACACTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTGCAATAAACCAACAATaGAAACTGGAGAACAAGATG +
Preference number: 4 (lower is better)
Translates to: PFLFKTLIGMPGMLRANGAINQQ*KLENKM
Trigger: CATCTTGTTCTCCAGTTTCCATTGTTGGTTTATTGC...ACCATTGGCCCTTAGCATTCCCGGCATACCTATTAGTGTCTTAAAAAGGAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
CDS-3UTR CCA 90 bp CTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGCAATAAACCAACAATaGAAACTGGAGAACAAGATG +
Preference number: 4 (lower is better)
Translates to: LCSLHVNRFNVCWHQLSVAINQQ*KLENKM
Trigger: CATCTTGTTCTCCAGTTTCCATTGTTGGTTTATTGC...TACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
CDS-3UTR CCA 90 bp AGGCTATGGTCACAGATGGTCTCTGCTTACCACTGTAAGGTAAATGTGCAAAGCCTACTAGTTGCTGTTTaGTCAATCTTTAGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: RLWSQMVSAYHCKVNVQSLLVAV*SIFRKR
Trigger: CCTTTTCCTAAAGATTGACCAAACAGCAACTAGTAG...GCTTTGCACATTTACCTTACAGTGGTAAGCAGAGACCATCTGTGACCATAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR CCA 90 bp CTGATTAACACTGAAATGAAGAACAAGGCCACAGATAGAGTCCGATGTAACTGGGGCATGAAGTCCTCATaGATAATCCCTACGCTTTTT +
Preference number: 4 (lower is better)
Translates to: LINTEMKNKATDRVRCNWGMKSS*IIPTLF
Trigger: AAAAAGCGTAGGGATTATCCATGAGGACTTCATGCC...CCAGTTACATCGGACTCTATCTGTGGCCTTGTTCTTCATTTCAGTGTTAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
3UTR CAA 72 bp CTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTaGACCAGTTGCTTTGATCGTAGGATTACATTTGAG +
Preference number: 4 (lower is better)
Translates to: LMSFLSSLLMEV*TSCFDRRITFE
Trigger: CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CAGGGTTGTTGTGGTGGAAGACAGGTTTCATGGAAGTTCAAAGTGATTATGTCTTCTTTCATCAATACCTaGTCCACTGAATTGACTGCT +
Preference number: 4 (lower is better)
Translates to: QGCCGGRQVSWKFKVIMSSFINT*STELTA
Trigger: AGCAGTCAATTCAGTGGATCAGGTATTGATGAAAGA...AGACATAATCACTTTGAACTTCCATGAAACCTGTCTTCCACCACAACAACCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACTCTTTCATCAATACCTaGTCCACTGAATTGACTGCT +
Preference number: 4 (lower is better)
Translates to: ADVLSDELPIFTSDGSVDSFINT*STELTA
Trigger: AGCAGTCAATTCAGTGGATCAGGTATTGATGAAAGA...GTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTTTCCCATCAGATTTaGGTTCATGAAAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: DVLSDELPIFTSDGSVDQFSHQI*VHERCW
Trigger: CCAACACCTTTCATGAACTCAAATCTGATGGGAAAA...CTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCAACGGTTGAAATCATCTaGATTTGGGGATGGTGCATA +
Preference number: 4 (lower is better)
Translates to: LLQTSHGLMFYLMSFLSSTVEII*IWGWCI
Trigger: TATGCACCATCCCCAAATTCAGATGATTTCAACCGT...TGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TTTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCTGTACTAGACAGGACTaGATGATTGCCATTGAGACT +
Preference number: 4 (lower is better)
Translates to: FVANISWADVLSDELPIFCTRQD*MIAIET
Trigger: AGTCTCAATGGCAATCATTCAGTCCTGTCTAGTACA...GAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp TCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAAACATAACTCTGGAACTGGCTaGTGTTTACATATGACCCAT +
Preference number: 4 (lower is better)
Translates to: SDCAEATHCLQQKICCKHNSGTG*CLHMTH
Trigger: ATGGGTCATATGTAAACATCAGCCAGTTCCAGAGTT...ATGTTTGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTGTCTTCAGATAATCTaGGTTGTCCAAGTCCTTATG +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSICLQII*VVQVLM
Trigger: CATAAGGACTTGGACAACTCAGATTATCTGAAGACA...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp CTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATTGTCTTCAGATAATCTaGGTTGTCCAAGTCCTTATG +
Preference number: 4 (lower is better)
Translates to: LMSFLSSLLMEVLTSCFDCLQII*VVQVLM
Trigger: CATAAGGACTTGGACAACTCAGATTATCTGAAGACA...ATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR TCA 90 bp TCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTTGTTCTCTGCACGTaGACCGCTTTAATGTATGCT +
Preference number: 4 (lower is better)
Translates to: SLLMEVLTSCFDRRITFEFVLCT*TALMYA
Trigger: AGCATACATTAAAGCGGTTCACGTGCAGAGAACAAA...CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR TCA 90 bp TCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGATAAGGAAATACGGGTaGCCATTGCTCTTGTATTCC +
Preference number: 4 (lower is better)
Translates to: SLLMEVLTSCFDRRITFEIRKYG*PLLLYS
Trigger: GGAATACAAGAGCAATGGTCACCCGTATTTCCTTAT...CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCCAGATGGTTTGCAGTTaGTTAAATCACCCACTCAAT +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSIQMVCS*LNHPLN
Trigger: ATTGAGTGGGTGATTTAATCAACTGCAAACCATCTG...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTTCTTTCCTCTGTGTGCTaGTTGCCACTGTTGATATTG +
Preference number: 4 (lower is better)
Translates to: LLMEVLTSCFDRRITFEFLSSVC*LPLLIL
Trigger: CAATATCAACAGTGGCAATCAGCACACAGAGGAAAG...AAACTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp ATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGTCTTGTCTTTCCTCTGTGTGCTaGTTGCCACTGTTGATATTG +
Preference number: 4 (lower is better)
Translates to: MTDLLGIILIRVPEVLSCLSSVC*LPLLIL
Trigger: CAATATCAACAGTGGCAATCAGCACACAGAGGAAAG...ACAAGACAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTAAGTTCACAAATGACTaGCTTGTTAGGAATCATCCT +
Preference number: 4 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITKFTND*LVRNHP
Trigger: AGGATGATTCCTAACAAGTCAGTCATTTGTGAACTT...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp AAGGAATTATTAAGCCAAGATACCTCCTTTAGCATGTTTTTCTCTCCCAGGGTTTTAGGAAAAGCAGTGTaGGTGTTTCTGGGACGAATG +
Preference number: 4 (lower is better)
Translates to: KELLSQDTSFSMFFSPRVLGKAV*VFLGRM
Trigger: CATTCGTCCCAGAAACACTCACACTGCTTTTCCTAA...AACCCTGGGAGAGAAAAACATGCTAAAGGAGGTATCTTGGCTTAATAATTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR TCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCGTTAGGCACCCAATGTaGACAGTGGATTTCATAATT +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSIVRHPM*TVDFII
Trigger: AATTATGAAATCCACTGTTCACATTGGGTGCCTAAC...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR TCA 90 bp AAGATGGAGGAGGAATGGGATTCATTCTTCCAGACAATACGTGTAAGTTTACTTACGTGTAAGTTTACTTaGCTGTGGAATGCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: KMEEEWDSFFQTIRVSLLTCKFT*LWNAKG
Trigger: TCCCTTGGCATTCCACAGTCAAGTAAACTTACACGT...AAGTAAACTTACACGTATTGTCTGGAAGAATGAATCCCATTCCTCCTCCATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560948.1
CDS-3UTR GCA 90 bp CTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTCATGTGAATGAAGGTTaGCATAACTACTGGATTGAG +
Preference number: 4 (lower is better)
Translates to: LSDELPIFTSDGSVDQLLHVNEG*HNYWIE
Trigger: CTCAATCCAGTAGTTATGGCAACCTTCATTCACATG...AAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp CTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATAGGAGAATAAATAGATaGCAAAGCCTTTCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: LMSFLSSLLMEVLTSCFDRRINR*QSLSKC
Trigger: GCACTTGGAAAGGCTTTGGCATCTATTTATTCTCCT...ATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp AAGGAATTATTAAGCCAAGATACCTCCTTTAGCATGTTTTTCTCTCCCAGGGTTTTGAAGCTGATCGACTaGTTGCAACAAGGCTTGATC +
Preference number: 4 (lower is better)
Translates to: KELLSQDTSFSMFFSPRVLKLID*LQQGLI
Trigger: GATCAAGCCTTGTTGCAAGCAGTCGATCAGCTTCAA...AACCCTGGGAGAGAAAAACATGCTAAAGGAGGTATCTTGGCTTAATAATTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp TTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCAGCCAAGCTCTTTGAATaGTTCATTAATATCCCGCAC +
Preference number: 4 (lower is better)
Translates to: LLQTSHGLMFYLMSFLSSAKLFE*FINIPH
Trigger: GTGCGGGATATTAATGAAGCATTCAAAGAGCTTGGC...TGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp TCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGGCCAAGCTCTTTGAATaGTTCATTAATATCCCGCAC +
Preference number: 4 (lower is better)
Translates to: SLLMEVLTSCFDRRITFEAKLFE*FINIPH
Trigger: GTGCGGGATATTAATGAAGCATTCAAAGAGCTTGGC...CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp TTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCATTCCTCTCTCTGACTTaGTGTTCTAGACTAAGGATG +
Preference number: 4 (lower is better)
Translates to: LLQTSHGLMFYLMSFLSSFLSLT*CSRLRM
Trigger: CATCCTTAGTCTAGAACAGCAAGTCAGAGAGAGGAA...TGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp TCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTCCTCTCTCTGACTTaGTGTTCTAGACTAAGGATG +
Preference number: 4 (lower is better)
Translates to: SLLMEVLTSCFDRRITFEFLSLT*CSRLRM
Trigger: CATCCTTAGTCTAGAACAGCAAGTCAGAGAGAGGAA...CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp CTGATTAACACTGAAATGAAGAACAAGGCCACAGATAGAGTCCGATGTAACTGGGAAGTGTTGACCAGTTaGTTTGATCGTAGGATTACA +
Preference number: 4 (lower is better)
Translates to: LINTEMKNKATDRVRCNWEVLTS*FDRRIT
Trigger: TGTAATCCTACGATCAAAGCAACTGGTCAACACTTC...CCAGTTACATCGGACTCTATCTGTGGCCTTGTTCTTCATTTCAGTGTTAATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCGAAGTGTTGACCAGTTaGTTTGATCGTAGGATTACA +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSIEVLTS*FDRRIT
Trigger: TGTAATCCTACGATCAAAGCAACTGGTCAACACTTC...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp TCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGAACCGCTTTAATGTATaGTGGCATCAGCTGAGTGTA +
Preference number: 4 (lower is better)
Translates to: SLLMEVLTSCFDRRITFENRFNV*WHQLSV
Trigger: TACACTCAGCTGATGCCAGCATACATTAAAGCGGTT...CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR GCA 90 bp TTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCAAACCGCTTTAATGTATaGTGGCATCAGCTGAGTGTA +
Preference number: 4 (lower is better)
Translates to: LLQTSHGLMFYLMSFLSSNRFNV*WHQLSV
Trigger: TACACTCAGCTGATGCCAGCATACATTAAAGCGGTT...TGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR GCA 90 bp CAATGGTTGTCACTGCTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGGTATGTAGTACTTACTaGTTGGAAAACAAAGCGATT +
Preference number: 4 (lower is better)
Translates to: QWLSLLCSLHVNRFNVCWVCSTY*LENKAI
Trigger: AATCGCTTTGTTTTCCAAGCAGTAAGTACTACATAC...CCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAGCAGTGACAACCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp CTGACAAGTACTGGTTTAATGCTAATCTGGCTCATCATTTTGGGACAGGGGCAGGTATGTAGTACTTACTaGTTGGAAAACAAAGCGATT +
Preference number: 4 (lower is better)
Translates to: LTSTGLMLIWLIILGQGQVCSTY*LENKAI
Trigger: AATCGCTTTGTTTTCCAAGCAGTAAGTACTACATAC...CTGCCCCTGTCCCAAAATGATGAGCCAGATTAGCATTAAACCAGTACTTGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp GATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGAATACGGGTGACCATTaGTCTTGTATTCCATTAGGT +
Preference number: 4 (lower is better)
Translates to: DVLSDELPIFTSDGSVDQNTGDH*SCIPLG
Trigger: ACCTAATGGAATACAAGAGCAATGGTCACCCGTATT...CTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTTCCCACTATTAACAGGTaGGGAAAACATCGCACTGAA +
Preference number: 4 (lower is better)
Translates to: LLMEVLTSCFDRRITFEFPTINR*GKHRTE
Trigger: TTCAGTGCGATGTTTTCCCCACCTGTTAATAGTGGG...AAACTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCACGGAAAACTACTGCTaGTATGGTCAGGAGAATAAA +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSITENYC*YGQENK
Trigger: TTTATTCTCCTGACCATACCAGCAGTAGTTTTCCGT...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CCA 90 bp GATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGCCAATTGGTGCATTATaGGATGGTCCCAATAAACTA +
Preference number: 4 (lower is better)
Translates to: DVLSDELPIFTSDGSVDQPIGAL*DGPNKL
Trigger: TAGTTTATTGGGACCATCCCATAATGCACCAATTGG...CTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp TGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCACATTAACTTTTTCCCTCCAATTGGTGCATTATaGGATGGTCCCAATAAACTA +
Preference number: 4 (lower is better)
Translates to: CMLASAECRSAFHINFFPPIGAL*DGPNKL
Trigger: TAGTTTATTGGGACCATCCCATAATGCACCAATTGG...AGGGAAAAAGTTAATGTGGAAAGCTGATCTACACTCAGCTGATGCCAGCATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGACCTTGATATCTTTTTaGGAGGATTCATCATCTGAC +
Preference number: 4 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYETLISF*EDSSSD
Trigger: GTCAGATGATGAATCCTCCCAAAAAGATATCAAGGT...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp TTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACGCTTTAATGTATGCTaGCATCAGCTGAGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: LLQTSHGLMFYLMSFLSSRFNVC*HQLSVD
Trigger: ATCTACACTCAGCTGATGCCAGCATACATTAAAGCG...TGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGGTGAGTGGAGAGATCGTAGTACTTACTGCTTaGAAAACAAAGCGATTTCTA +
Preference number: 4 (lower is better)
Translates to: HLSIQFRHKATSTVSGEIVVLTA*KTKRFL
Trigger: TAGAAATCGCTTTGTTTTCCAAGCAGTAAGTACTAC...GATCTCTCCACTCACCGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CCCTTCCTTTTTAAGACACTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTGTAGTACTTACTGCTTaGAAAACAAAGCGATTTCTA +
Preference number: 4 (lower is better)
Translates to: PFLFKTLIGMPGMLRANGVVLTA*KTKRFL
Trigger: TAGAAATCGCTTTGTTTTCCAAGCAGTAAGTACTAC...ACCATTGGCCCTTAGCATTCCCGGCATACCTATTAGTGTCTTAAAAAGGAAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTGGTTTAATGCTAATCTaGCTCATCATTTTGGGACAG +
Preference number: 4 (lower is better)
Translates to: LSDELPIFTSDGSVDQLLGLMLI*LIILGQ
Trigger: CTGTCCCAAAATGATGAGCCAGATTAGCATTAAACC...AAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp GATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTGGACTGACAAGTACTaGTTTAATGCTAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: DVLSDELPIFTSDGSVDQWTDKY*FNANLA
Trigger: AGCCAGATTAGCATTAAACCAGTACTTGTCAGTCCA...CTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGGGAAGACAGGTTTCATaGAAGTTCAAAGTGATTATG +
Preference number: 4 (lower is better)
Translates to: HGLMFYLMSFLSSLLMEVGRQVS*KFKVIM
Trigger: CATAATCACTTTGAACTTCCATGAAACCTGTCTTCC...CACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTTAGCTACATAGTGATTTaGGTCCTTTCCTCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: LLMEVLTSCFDRRITFEFSYIVI*VLSSVC
Trigger: GCACACAGAGGAAAGGACCCAAATCACTATGTAGCT...AAACTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCAGGCATGAAGTCCTCATaGATAATCCCTACGCTTTTT +
Preference number: 4 (lower is better)
Translates to: LLQTSHGLMFYLMSFLSSGMKSS*IIPTLF
Trigger: AAAAAGCGTAGGGATTATCCATGAGGACTTCATGCC...TGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR CCA 90 bp CTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATATGAGTCCAGTTGTCTaGTCTCAAAATGGAGGTAAA +
Preference number: 4 (lower is better)
Translates to: LMSFLSSLLMEVLTSCFDMSPVV*SQNGGK
Trigger: TTTACCTCCATTTTGAGACCAGACAACTGGACTCAT...ATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559710.5
CDS-3UTR TCA 90 bp TCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAAACATTCTTTCATCAATACCTaGTCCACTGAATTGACTGCT +
Preference number: 4 (lower is better)
Translates to: SDCAEATHCLQQKICCKHSFINT*STELTA
Trigger: AGCAGTCAATTCAGTGGATCAGGTATTGATGAAAGA...ATGTTTGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp AAGGAATTATTAAGCCAAGATACCTCCTTTAGCATGTTTTTCTCTCCCAGGGTTTGTACTAGACAGGACTaGATGATTGCCATTGAGACT +
Preference number: 4 (lower is better)
Translates to: KELLSQDTSFSMFFSPRVCTRQD*MIAIET
Trigger: AGTCTCAATGGCAATCATTCAGTCCTGTCTAGTACA...AACCCTGGGAGAGAAAAACATGCTAAAGGAGGTATCTTGGCTTAATAATTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TCACAAATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGAACTCTGGAACTGGCTaGTGTTTACATATGACCCAT +
Preference number: 4 (lower is better)
Translates to: SQMTDLLGIILIRVPEVLNSGTG*CLHMTH
Trigger: ATGGGTCATATGTAAACATCAGCCAGTTCCAGAGTT...CAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCATTTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp AAGGAATTATTAAGCCAAGATACCTCCTTTAGCATGTTTTTCTCTCCCAGGGTTAACTCTGGAACTGGCTaGTGTTTACATATGACCCAT +
Preference number: 4 (lower is better)
Translates to: KELLSQDTSFSMFFSPRVNSGTG*CLHMTH
Trigger: ATGGGTCATATGTAAACATCAGCCAGTTCCAGAGTT...AACCCTGGGAGAGAAAAACATGCTAAAGGAGGTATCTTGGCTTAATAATTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TCACAAATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGATAAGGAAATACGGGTaGCCATTGCTCTTGTATTCC +
Preference number: 4 (lower is better)
Translates to: SQMTDLLGIILIRVPEVLIRKYG*PLLLYS
Trigger: GGAATACAAGAGCAATGGTCACCCGTATTTCCTTAT...CAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCATTTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp CTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATAAGTTCACAAATGACTaGCTTGTTAGGAATCATCCT +
Preference number: 4 (lower is better)
Translates to: LMSFLSSLLMEVLTSCFDKFTND*LVRNHP
Trigger: AGGATGATTCCTAACAAGTCAGTCATTTGTGAACTT...ATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp TGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCACATTAACTTTTTCCCTAAGTTCACAAATGACTaGCTTGTTAGGAATCATCCT +
Preference number: 4 (lower is better)
Translates to: CMLASAECRSAFHINFFPKFTND*LVRNHP
Trigger: AGGATGATTCCTAACAAGTCAGTCATTTGTGAACTT...AGGGAAAAAGTTAATGTGGAAAGCTGATCTACACTCAGCTGATGCCAGCATACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR TCA 90 bp GTTAATCAGATGTTGAGCTTAGATTTGAATCGAGGACTATTTAATGCCAAAGCTTTTCAGGGAGTGGAGTaGGTTTTCATAGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: VNQMLSLDLNRGLFNAKAFQGVE*VFIAWG
Trigger: TCCCCAAGCTATGAAAACTCACTCCACTCCCTGAAA...AGCTTTGGCATTAAATAGTCCTCGATTCAAATCTAAGCTCAACATCTGATTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333725.10
CDS-3UTR GCA 90 bp CTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTTGTAATCCAGTATCTCTaGTGTACAGGGAAAATGAGC +
Preference number: 4 (lower is better)
Translates to: LLMEVLTSCFDRRITFEFVIQYL*CTGKMS
Trigger: GCTCATTTTCCCTGTACAGCAGAGATACTGGATTAC...AAACTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp TCACAAATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGTTGACGGAAAACTACTaGTGGTATGGTCAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: SQMTDLLGIILIRVPEVLLTENY*WYGQEN
Trigger: ATTCTCCTGACCATACCAGCAGTAGTTTTCCGTCAA...CAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCATTTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp CTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTTGCCAAGCTCTTTGAATaGTTCATTAATATCCCGCAC +
Preference number: 4 (lower is better)
Translates to: LLMEVLTSCFDRRITFEFAKLFE*FINIPH
Trigger: GTGCGGGATATTAATGAAGCATTCAAAGAGCTTGGC...AAACTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp TTTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCGAAGTGTTGACCAGTTaGTTTGATCGTAGGATTACA +
Preference number: 4 (lower is better)
Translates to: FVANISWADVLSDELPIFEVLTS*FDRRIT
Trigger: TGTAATCCTACGATCAAAGCAACTGGTCAACACTTC...GAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp TCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGGAAGTGTTGACCAGTTaGTTTGATCGTAGGATTACA +
Preference number: 4 (lower is better)
Translates to: SLLMEVLTSCFDRRITFEEVLTS*FDRRIT
Trigger: TGTAATCCTACGATCAAAGCAACTGGTCAACACTTC...CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR GCA 90 bp AAGGAATTATTAAGCCAAGATACCTCCTTTAGCATGTTTTTCTCTCCCAGGGTTAACCGCTTTAATGTATaGTGGCATCAGCTGAGTGTA +
Preference number: 4 (lower is better)
Translates to: KELLSQDTSFSMFFSPRVNRFNV*WHQLSV
Trigger: TACACTCAGCTGATGCCAGCATACATTAAAGCGGTT...AACCCTGGGAGAGAAAAACATGCTAAAGGAGGTATCTTGGCTTAATAATTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp TTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCAAATACGGGTGACCATTaGTCTTGTATTCCATTAGGT +
Preference number: 4 (lower is better)
Translates to: LLQTSHGLMFYLMSFLSSNTGDH*SCIPLG
Trigger: ACCTAATGGAATACAAGAGCAATGGTCACCCGTATT...TGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTGATTAACACTGAAATGAAGAACAAGGCCACAGATAGAGTCCGATGTAACTGGACCTTGATATCTTTTTaGGAGGATTCATCATCTGAC +
Preference number: 4 (lower is better)
Translates to: LINTEMKNKATDRVRCNWTLISF*EDSSSD
Trigger: GTCAGATGATGAATCCTCCCAAAAAGATATCAAGGT...CCAGTTACATCGGACTCTATCTGTGGCCTTGTTCTTCATTTCAGTGTTAATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCACCTTGATATCTTTTTaGGAGGATTCATCATCTGAC +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSITLISF*EDSSSD
Trigger: GTCAGATGATGAATCCTCCCAAAAAGATATCAAGGT...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp GCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACACCTTGATATCTTTTTaGGAGGATTCATCATCTGAC +
Preference number: 4 (lower is better)
Translates to: ADVLSDELPIFTSDGSVDTLISF*EDSSSD
Trigger: GTCAGATGATGAATCCTCCCAAAAAGATATCAAGGT...GTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp TCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAAACATGTTGCAAACATCTCATaGGCTGATGTTCTATCTGAT +
Preference number: 4 (lower is better)
Translates to: SDCAEATHCLQQKICCKHVANIS*ADVLSD
Trigger: ATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC...ATGTTTGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CCA 90 bp CTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTTCGCTTTAATGTATGCTaGCATCAGCTGAGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: LLMEVLTSCFDRRITFEFRFNVC*HQLSVD
Trigger: ATCTACACTCAGCTGATGCCAGCATACATTAAAGCG...AAACTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CCA 90 bp AAGGAATTATTAAGCCAAGATACCTCCTTTAGCATGTTTTTCTCTCCCAGGGTTAAAACGCTATTCATATaGCAAGAGGATAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: KELLSQDTSFSMFFSPRVKTLFI*QEDRRG
Trigger: CCCTCTCCTATCCTCTTGCCATATGAATAGCGTTTT...AACCCTGGGAGAGAAAAACATGCTAAAGGAGGTATCTTGGCTTAATAATTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTTAAAACGCTATTCATATaGCAAGAGGATAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LLMEVLTSCFDRRITFEFKTLFI*QEDRRG
Trigger: CCCTCTCCTATCCTCTTGCCATATGAATAGCGTTTT...AAACTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCACATTAACTTTTTCCCTGGAAGACAGGTTTCATaGAAGTTCAAAGTGATTATG +
Preference number: 4 (lower is better)
Translates to: CMLASAECRSAFHINFFPGRQVS*KFKVIM
Trigger: CATAATCACTTTGAACTTCCATGAAACCTGTCTTCC...AGGGAAAAAGTTAATGTGGAAAGCTGATCTACACTCAGCTGATGCCAGCATACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CAGGGTTGTTGTGGTGGAAGACAGGTTTCATGGAAGTTCAAAGTGATTATGTCTGGAAGACAGGTTTCATaGAAGTTCAAAGTGATTATG +
Preference number: 4 (lower is better)
Translates to: QGCCGGRQVSWKFKVIMSGRQVS*KFKVIM
Trigger: CATAATCACTTTGAACTTCCATGAAACCTGTCTTCC...AGACATAATCACTTTGAACTTCCATGAAACCTGTCTTCCACCACAACAACCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp GATTCATTCTTCCAGACAATACGTGTAAGTTTACTTGACTGTGGAATGCCAAGGCCTTCAAAGACAACCTaGCTGATGTTTACATATGAC +
Preference number: 4 (lower is better)
Translates to: DSFFQTIRVSLLDCGMPRPSKTT*LMFTYD
Trigger: GTCATATGTAAACATCAGCCAGGTTGTCTTTGAAGG...CCTTGGCATTCCACAGTCAAGTAAACTTACACGTATTGTCTGGAAGAATGAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560948.1
CDS-3UTR TCA 90 bp GTTAATCAGATGTTGAGCTTAGATTTGAATCGAGGACTATTTAATGCCAAAGCTCTAGACAGGACTGAATaGTTGCCATTGAGACTGACA +
Preference number: 4 (lower is better)
Translates to: VNQMLSLDLNRGLFNAKALDRTE*LPLRLT
Trigger: TGTCAGTCTCAATGGCAATCATTCAGTCCTGTCTAG...AGCTTTGGCATTAAATAGTCCTCGATTCAAATCTAAGCTCAACATCTGATTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR TCA 90 bp GTTAATCAGATGTTGAGCTTAGATTTGAATCGAGGACTATTTAATGCCAAAGCTTTGTCCAAGTCCTTATaGGGAGAGGTCACCTTCTAT +
Preference number: 4 (lower is better)
Translates to: VNQMLSLDLNRGLFNAKALSKSL*GEVTFY
Trigger: ATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAA...AGCTTTGGCATTAAATAGTCCTCGATTCAAATCTAAGCTCAACATCTGATTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR GCA 90 bp CTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTTCATGTGAATGAAGGTTaGCATAACTACTGGATTGAG +
Preference number: 4 (lower is better)
Translates to: LLMEVLTSCFDRRITFEFHVNEG*HNYWIE
Trigger: CTCAATCCAGTAGTTATGGCAACCTTCATTCACATG...AAACTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp TCACAAATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGAGGAGAATAAATAGATaGCAAAGCCTTTCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: SQMTDLLGIILIRVPEVLRRINR*QSLSKC
Trigger: GCACTTGGAAAGGCTTTGGCATCTATTTATTCTCCT...CAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCATTTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp AAGGAATTATTAAGCCAAGATACCTCCTTTAGCATGTTTTTCTCTCCCAGGGTTAGGAGAATAAATAGATaGCAAAGCCTTTCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: KELLSQDTSFSMFFSPRVRRINR*QSLSKC
Trigger: GCACTTGGAAAGGCTTTGGCATCTATTTATTCTCCT...AACCCTGGGAGAGAAAAACATGCTAAAGGAGGTATCTTGGCTTAATAATTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp ATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGTCTTGTGAAGTGTTGACCAGTTaGTTTGATCGTAGGATTACA +
Preference number: 4 (lower is better)
Translates to: MTDLLGIILIRVPEVLSCEVLTS*FDRRIT
Trigger: TGTAATCCTACGATCAAAGCAACTGGTCAACACTTC...ACAAGACAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp GCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACGTATGTAGTACTTACTaGTTGGAAAACAAAGCGATT +
Preference number: 4 (lower is better)
Translates to: ADVLSDELPIFTSDGSVDVCSTY*LENKAI
Trigger: AATCGCTTTGTTTTCCAAGCAGTAAGTACTACATAC...GTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR GCA 90 bp TGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCACATTAACTTTTTCCCTGTATGTAGTACTTACTaGTTGGAAAACAAAGCGATT +
Preference number: 4 (lower is better)
Translates to: CMLASAECRSAFHINFFPVCSTY*LENKAI
Trigger: AATCGCTTTGTTTTCCAAGCAGTAAGTACTACATAC...AGGGAAAAAGTTAATGTGGAAAGCTGATCTACACTCAGCTGATGCCAGCATACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTTACGGAAAACTACTGCTaGTATGGTCAGGAGAATAAA +
Preference number: 4 (lower is better)
Translates to: LLMEVLTSCFDRRITFEFTENYC*YGQENK
Trigger: TTTATTCTCCTGACCATACCAGCAGTAGTTTTCCGT...AAACTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATGTAGTACTTACTGCTTaGAAAACAAAGCGATTTCTA +
Preference number: 4 (lower is better)
Translates to: LMSFLSSLLMEVLTSCFDVVLTA*KTKRFL
Trigger: TAGAAATCGCTTTGTTTTCCAAGCAGTAAGTACTAC...ATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCGTAGTACTTACTGCTTaGAAAACAAAGCGATTTCTA +
Preference number: 4 (lower is better)
Translates to: SSDNLSCPSPYEERSPSIVVLTA*KTKRFL
Trigger: TAGAAATCGCTTTGTTTTCCAAGCAGTAAGTACTAC...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGGGAAGACAGGTTTCATaGAAGTTCAAAGTGATTATG +
Preference number: 4 (lower is better)
Translates to: SLLMEVLTSCFDRRITFEGRQVS*KFKVIM
Trigger: CATAATCACTTTGAACTTCCATGAAACCTGTCTTCC...CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp TCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGGCAATAAACCAACAATaGAAACTGGAGAACAAGATG +
Preference number: 4 (lower is better)
Translates to: SLLMEVLTSCFDRRITFEAINQQ*KLENKM
Trigger: CATCTTGTTCTCCAGTTTCCATTGTTGGTTTATTGC...CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
CDS-3UTR TCA 90 bp GTTAATCAGATGTTGAGCTTAGATTTGAATCGAGGACTATTTAATGCCAAAGCTAACTCTGGAACTGGCTaGTGTTTACATATGACCCAT +
Preference number: 4 (lower is better)
Translates to: VNQMLSLDLNRGLFNAKANSGTG*CLHMTH
Trigger: ATGGGTCATATGTAAACATCAGCCAGTTCCAGAGTT...AGCTTTGGCATTAAATAGTCCTCGATTCAAATCTAAGCTCAACATCTGATTAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR GCA 90 bp GTTAATCAGATGTTGAGCTTAGATTTGAATCGAGGACTATTTAATGCCAAAGCTTTGACGGAAAACTACTaGTGGTATGGTCAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: VNQMLSLDLNRGLFNAKALTENY*WYGQEN
Trigger: ATTCTCCTGACCATACCAGCAGTAGTTTTCCGTCAA...AGCTTTGGCATTAAATAGTCCTCGATTCAAATCTAAGCTCAACATCTGATTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR GCA 90 bp TCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAAACATGTATGTAGTACTTACTaGTTGGAAAACAAAGCGATT +
Preference number: 4 (lower is better)
Translates to: SDCAEATHCLQQKICCKHVCSTY*LENKAI
Trigger: AATCGCTTTGTTTTCCAAGCAGTAAGTACTACATAC...ATGTTTGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CCA 90 bp CTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTTCTACTAGTTGCTGTTTaGTCAATCTTTAGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: LLMEVLTSCFDRRITFEFLLVAV*SIFRKR
Trigger: CCTTTTCCTAAAGATTGACCAAACAGCAACTAGTAG...AAACTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR CCA 90 bp GATTCATTCTTCCAGACAATACGTGTAAGTTTACTTGACTGTGGAATGCCAAGGAACACAGCAACTTTATaGGATTGTATCCAGATTACA +
Preference number: 4 (lower is better)
Translates to: DSFFQTIRVSLLDCGMPRNTATL*DCIQIT
Trigger: TGTAATCTGGATACAATCCCATAAAGTTGCTGTGTT...CCTTGGCATTCCACAGTCAAGTAAACTTACACGTATTGTCTGGAAGAATGAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560948.1
CDS-3UTR CCA 90 bp ATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGTCTTGTGTAGTACTTACTGCTTaGAAAACAAAGCGATTTCTA +
Preference number: 4 (lower is better)
Translates to: MTDLLGIILIRVPEVLSCVVLTA*KTKRFL
Trigger: TAGAAATCGCTTTGTTTTCCAAGCAGTAAGTACTAC...ACAAGACAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS GCA 90 bp CGACTCGCTCCCACCGCGGCGCGAGCAAGGGGCGGGAGGGCTCAGTaGCCGCGCCGGGTCCCGGAATCCACGCGTTCCTCGCCGCGGCCC +
Preference number: 5 (lower is better)
Translates to: RLAPTAARARGGRAQ*PRRVPESTRSSPRP
Trigger: GGGCCGCGGCGAGGAACGCGTGGATTCCGGGACCCGGCGCGGGCACTGAGCCCTCCCGCCCCTTGCTCGCGCCGCGGTGGGAGCGAGTCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561152.1
CDS GCA 90 bp CGGGCTTGGGCTTCCCCTTGCACCGCCCAGCGGCTCGGTTCACTTTaGCCCGCACGAGCTCTCGGGTCTGGGAGGGGGAGGCGGCTTTCG +
Preference number: 5 (lower is better)
Translates to: RAWASPCTAQRLGSL*PARALGSGRGRRLS
Trigger: CGAAAGCCGCCTCCCCCTCCCAGACCCGAGAGCTCGTGCGGGGCAAAGTGAACCGAGCCGCTGGGCGGTGCAAGGGGAAGCCCAAGCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000558908.5
ENST00000559609.5
ENST00000560190.5
CDS GCA 90 bp AGGTCGCTCAGCTCCTTGTCGGTCCCTATAGCGGCCATGCGTTGTTaGTGGGGATTCATCTTCGGCCACTTCTGCCGCCCCGTCTCCGCA +
Preference number: 5 (lower is better)
Translates to: RSLSSLSVPIAAMRC*WGFIFGHFCRPVSA
Trigger: TGCGGAGACGGGGCGGCAGAAGTGGCCGAAGATGAATCCCCAGCAACAACGCATGGCCGCTATAGGGACCGACAAGGAGCTGAGCGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438423.6
ENST00000557843.5
CDS CCA 90 bp TCGCTCAGCTCCTTGTCGGTCCCTATAGCGGCCATGCGTTGTTGCTaGGGATTCATCTTCGGCCACTTCTGCCGCCCCGTCTCCGCATCC +
Preference number: 5 (lower is better)
Translates to: SLSSLSVPIAAMRCC*GFIFGHFCRPVSAS
Trigger: GGATGCGGAGACGGGGCGGCAGAAGTGGCCGAAGATGAATCCCCAGCAACAACGCATGGCCGCTATAGGGACCGACAAGGAGCTGAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp ACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTCCTGGCAGTGTGGTaGGCGGCTCTGCCGATACGG +
Preference number: 5 (lower is better)
Translates to: TVSGEIETVSDCAEATHCFLAVW*AALPIR
Trigger: CCGTATCGGCAGAGCCGCCAACCACACTGCCAGGAA...GCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCGGCTTGGGCTTCCCCTaGCACCGCCCAGCGGCTCGG +
Preference number: 5 (lower is better)
Translates to: TVSDCAEATHCLQQKICCGLGFP*HRPAAR
Trigger: CCGAGCCGCTGGGCGGTGCAAGGGGAAGCCCAAGCC...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
CDS-3UTR CAA 90 bp TCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGGCTTGGGCTTCCCCTaGCACCGCCCAGCGGCTCGG +
Preference number: 5 (lower is better)
Translates to: SRQSLIVQKRHTACNKRFGLGFP*HRPAAR
Trigger: CCGAGCCGCTGGGCGGTGCAAGGGGAAGCCCAAGCC...AAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
CDS-3UTR CAA 90 bp CCCTTCCTTTTTAAGACACTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTGCGGCTCGGTTCACTTaGCCCCGCACGAGCTCTCGG +
Preference number: 5 (lower is better)
Translates to: PFLFKTLIGMPGMLRANGAARFT*PRTSSR
Trigger: CCGAGAGCTCGTGCGGGGCAAAGTGAACCGAGCCGC...ACCATTGGCCCTTAGCATTCCCGGCATACCTATTAGTGTCTTAAAAAGGAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
CDS-3UTR CAA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGGTGAGTGGAGAGATCGCGGCTCGGTTCACTTaGCCCCGCACGAGCTCTCGG +
Preference number: 5 (lower is better)
Translates to: HLSIQFRHKATSTVSGEIAARFT*PRTSSR
Trigger: CCGAGAGCTCGTGCGGGGCAAAGTGAACCGAGCCGC...GATCTCTCCACTCACCGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
CDS-3UTR CAA 90 bp CAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAGCGGCTCGGTTCACTTaGCCCCGCACGAGCTCTCGG +
Preference number: 5 (lower is better)
Translates to: QSLIVQKRHTACNKRFVAAARFT*PRTSSR
Trigger: CCGAGAGCTCGTGCGGGGCAAAGTGAACCGAGCCGC...TGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
CDS-3UTR CAA 90 bp TTCATGAAAGGTGTTGGGGACAAGCCTTCATGGGCTCCTAATCGACTGTCATTCAGGTCGCTCAGCTCCTaGTCGGTCCCTATAGCGGCC +
Preference number: 5 (lower is better)
Translates to: FMKGVGDKPSWAPNRLSFRSLSS*SVPIAA
Trigger: GGCCGCTATAGGGACCGACAAGGAGCTGAGCGACCT...GAATGACAGTCGATTAGGAGCCCATGAAGGCTTGTCCCCAACACCTTTCATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561152.1
CDS CCA 90 bp ATGACCCATAGGGTTGGTAGTTTCACTAAGCCCAGGATGGGTTCCTaGCAGTGTGGTTGGCGGCTCTGCCGATACGGCAGAAACTTTTTC +
Preference number: 5 (lower is better)
Translates to: MTHRVGSFTKPRMGS*QCGWRLCRYGRNFF
Trigger: GAAAAAGTTTCTGCCGTATCGGCAGAGCCGCCAACCACACTGCCAGGAACCCATCCTGGGCTTAGTGAAACTACCAACCCTATGGGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
ENST00000560190.5
ENST00000560191.1
ENST00000560836.1
ENST00000560948.1
ENST00000561454.1
CDS-3UTR CAA 90 bp CACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCCTTGCCCTCCAGGTCTaGGCCACTGACTGGTACCTG +
Preference number: 5 (lower is better)
Translates to: HVNRFNVCWHQLSVDQLSLALQV*ATDWYL
Trigger: CAGGTACCAGTCAGTGGCCAAGACCTGGAGGGCAAG...GGAAAGCTGATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CTGACAAGTACTGGTTTAATGCTAATCTGGCTCATCATTTTGGGACAGGGGCAGTTCCTGGCAGTGTGGTaGGCGGCTCTGCCGATACGG +
Preference number: 5 (lower is better)
Translates to: LTSTGLMLIWLIILGQGQFLAVW*AALPIR
Trigger: CCGTATCGGCAGAGCCGCCAACCACACTGCCAGGAA...CTGCCCCTGTCCCAAAATGATGAGCCAGATTAGCATTAAACCAGTACTTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGTTCCTGGCAGTGTGGTaGGCGGCTCTGCCGATACGG +
Preference number: 5 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLFLAVW*AALPIR
Trigger: CCGTATCGGCAGAGCCGCCAACCACACTGCCAGGAA...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS GCA 90 bp TGGGAGGAGTGTGTGAGGCAGCAACGTAAGGTGAACTGCTGGTACTaGCGCGATGAAAGCTGGACATTGGTGGAAGACTCGTGTTTATGT +
Preference number: 5 (lower is better)
Translates to: WEECVRQQRKVNCWY*RDESWTLVEDSCLC
Trigger: ACATAAACACGAGTCTTCCACCAATGTCCAGCTTTCATCGCGGCAGTACCAGCAGTTCACCTTACGTTGCTGCCTCACACACTCCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559609.5
ENST00000560764.5
ENST00000561235.5
ENST00000561346.5
CDS GCA 90 bp TTCACTAAGCCCAGGATGGGTTCCTGGCAGTGTGGTTGGCGGCTCTaGCGATACGGCAGAAACTTTTTCTTCTTCCCTTCTCTTAAGGCA +
Preference number: 5 (lower is better)
Translates to: FTKPRMGSWQCGWRL*RYGRNFFFFPSLKA
Trigger: TGCCTTAAGAGAAGGGAAGAAGAAAAAGTTTCTGCCGTATCGGCAGAGCCGCCAACCACACTGCCAGGAACCCATCCTGGGCTTAGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
ENST00000560190.5
ENST00000560191.1
ENST00000560836.1
ENST00000560948.1
ENST00000561454.1
CDS CCA 90 bp GTTGGTAGTTTCACTAAGCCCAGGATGGGTTCCTGGCAGTGTGGTTaGCGGCTCTGCCGATACGGCAGAAACTTTTTCTTCTTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: VGSFTKPRMGSWQCG*RLCRYGRNFFFFPS
Trigger: AGAAGGGAAGAAGAAAAAGTTTCTGCCGTATCGGCAGAGCCGCCAACCACACTGCCAGGAACCCATCCTGGGCTTAGTGAAACTACCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
ENST00000560190.5
ENST00000560191.1
ENST00000560836.1
ENST00000560948.1
ENST00000561454.1
CDS-3UTR CAA 90 bp TTCATGAAAGGTGTTGGGGACAAGCCTTCATGGGCTCCTAATCGACTGTCATTCAGCGGCCATGCGTTGTaGCTGGGGATTCATCTTCGG +
Preference number: 5 (lower is better)
Translates to: FMKGVGDKPSWAPNRLSFSGHAL*LGIHLR
Trigger: CCGAAGATGAATCCCCAGCAACAACGCATGGCCGCT...GAATGACAGTCGATTAGGAGCCCATGAAGGCTTGTCCCCAACACCTTTCATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561152.1
CDS-3UTR CAA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAGGTCGCTCAGCTCCTaGTCGGTCCCTATAGCGGCC +
Preference number: 5 (lower is better)
Translates to: TVSDCAEATHCLQQKICCRSLSS*SVPIAA
Trigger: GGCCGCTATAGGGACCGACAAGGAGCTGAGCGACCT...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp ACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCGCTGGCTCATCCCATTaGATGAACTCCAAAGGTCAG +
Preference number: 5 (lower is better)
Translates to: TVSGEIETVSDCAEATHCAGSSH*MNSKGQ
Trigger: CTGACCTTTGGAGTTCATCAAATGGGATGAGCCAGC...GCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CTGACAAGTACTGGTTTAATGCTAATCTGGCTCATCATTTTGGGACAGGGGCAGCTTGCCCTCCAGGTCTaGGCCACTGACTGGTACCTG +
Preference number: 5 (lower is better)
Translates to: LTSTGLMLIWLIILGQGQLALQV*ATDWYL
Trigger: CAGGTACCAGTCAGTGGCCAAGACCTGGAGGGCAAG...CTGCCCCTGTCCCAAAATGATGAGCCAGATTAGCATTAAACCAGTACTTGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CTTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTCTTGCCCTCCAGGTCTaGGCCACTGACTGGTACCTG +
Preference number: 5 (lower is better)
Translates to: LLPPVRFVSSDNLSCPSPLALQV*ATDWYL
Trigger: CAGGTACCAGTCAGTGGCCAAGACCTGGAGGGCAAG...AGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
CDS-3UTR CAA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGCTTGCCCTCCAGGTCTaGGCCACTGACTGGTACCTG +
Preference number: 5 (lower is better)
Translates to: VLMRRGHLLSSLLITLELLALQV*ATDWYL
Trigger: CAGGTACCAGTCAGTGGCCAAGACCTGGAGGGCAAG...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CAA 90 bp ACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTAAGGCAGGCTGCTTaGGGGTTAAGGTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: TVSGEIETVSDCAEATHCLRQAA*GLRFLS
Trigger: AGAGAGGAACCTTAACCCCAAAGCAGCCTGCCTTAA...GCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGTTCCTGGCAGTGTGGTaGGCGGCTCTGCCGATACGG +
Preference number: 5 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYEFLAVW*AALPIR
Trigger: CCGTATCGGCAGAGCCGCCAACCACACTGCCAGGAA...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTTTCCTGGCAGTGTGGTaGGCGGCTCTGCCGATACGG +
Preference number: 5 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITFLAVW*AALPIR
Trigger: CCGTATCGGCAGAGCCGCCAACCACACTGCCAGGAA...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAAGCGGCCATGCGTTGTaGCTGGGGATTCATCTTCGG +
Preference number: 5 (lower is better)
Translates to: LCSLHVNRFNVCWHQLSVSGHAL*LGIHLR
Trigger: CCGAAGATGAATCCCCAGCAACAACGCATGGCCGCT...TACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CTTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTAGCGGCCATGCGTTGTaGCTGGGGATTCATCTTCGG +
Preference number: 5 (lower is better)
Translates to: LLPPVRFVSSDNLSCPSPSGHAL*LGIHLR
Trigger: CCGAAGATGAATCCCCAGCAACAACGCATGGCCGCT...AGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp TGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCACATTAACTTTTTCCCTAGGTCGCTCAGCTCCTaGTCGGTCCCTATAGCGGCC +
Preference number: 5 (lower is better)
Translates to: CMLASAECRSAFHINFFPRSLSS*SVPIAA
Trigger: GGCCGCTATAGGGACCGACAAGGAGCTGAGCGACCT...AGGGAAAAAGTTAATGTGGAAAGCTGATCTACACTCAGCTGATGCCAGCATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGCTTGCCCTCCAGGTCTaGGCCACTGACTGGTACCTG +
Preference number: 5 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYELALQV*ATDWYL
Trigger: CAGGTACCAGTCAGTGGCCAAGACCTGGAGGGCAAG...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CAA 90 bp ACTTCCACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACAAAGCTGATCGACTGCTaGCAACAAGGCTTGATCCTC +
Preference number: 5 (lower is better)
Translates to: TSTVSGEIETVSDCAEATKLIDC*QQGLIL
Trigger: GAGGATCAAGCCTTGTTGCAAGCAGTCGATCAGCTT...TGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGTGGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CAA 90 bp CACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCAAGCGTTCTCTGGCATaGTTAGCCATCCGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: HVNRFNVCWHQLSVDQLSKRSLA*LAIRLS
Trigger: GGAGAGGCGGATGGCTAACAATGCCAGAGAACGCTT...GGAAAGCTGATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CAA 90 bp CTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTTCCTGGCAGTGTGGTaGGCGGCTCTGCCGATACGG +
Preference number: 5 (lower is better)
Translates to: LSDELPIFTSDGSVDQLLFLAVW*AALPIR
Trigger: CCGTATCGGCAGAGCCGCCAACCACACTGCCAGGAA...AAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp GATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTCCTGGCAGTGTGGTaGGCGGCTCTGCCGATACGG +
Preference number: 5 (lower is better)
Translates to: DVLSDELPIFTSDGSVDQFLAVW*AALPIR
Trigger: CCGTATCGGCAGAGCCGCCAACCACACTGCCAGGAA...CTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS CCA 90 bp GACATGTGGGAAGTGGAGGTCCCCAGAATTCCACCAAAACCAGGCTaGCTCATCCCATTTGATGAACTCCAAAGGTCAGAAGAATTGTGG +
Preference number: 5 (lower is better)
Translates to: DMWEVEVPRIPPKPG*LIPFDELQRSEELW
Trigger: CCACAATTCTTCTGACCTTTGGAGTTCATCAAATGGGATGAGCCAGCCTGGTTTTGGTGGAATTCTGGGGACCTCCACTTCCCACATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000543579.5
ENST00000557843.5
ENST00000559609.5
ENST00000561235.5
ENST00000561346.5
CDS CCA 90 bp AGGCAGCAACGTAAGGTGAACTGCTGGTACTGCCGCGATGAAAGCTaGACATTGGTGGAAGACTCGTGTTTATGTCTGTTGGTGAAACTG +
Preference number: 5 (lower is better)
Translates to: RQQRKVNCWYCRDES*TLVEDSCLCLLVKL
Trigger: CAGTTTCACCAACAGACATAAACACGAGTCTTCCACCAATGTCCAGCTTTCATCGCGGCAGTACCAGCAGTTCACCTTACGTTGCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559609.5
ENST00000560764.5
ENST00000561235.5
ENST00000561346.5
CDS-3UTR CAA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAGCGGCCATGCGTTGTaGCTGGGGATTCATCTTCGG +
Preference number: 5 (lower is better)
Translates to: TVSDCAEATHCLQQKICCSGHAL*LGIHLR
Trigger: CCGAAGATGAATCCCCAGCAACAACGCATGGCCGCT...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp TCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAAACATAGGTCGCTCAGCTCCTaGTCGGTCCCTATAGCGGCC +
Preference number: 5 (lower is better)
Translates to: SDCAEATHCLQQKICCKHRSLSS*SVPIAA
Trigger: GGCCGCTATAGGGACCGACAAGGAGCTGAGCGACCT...ATGTTTGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp AGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAAATGCTGTCTGATCCATaGATGGGAGGAGTGTGTGAG +
Preference number: 5 (lower is better)
Translates to: SGEIETVSDCAEATHCLQMLSDP*MGGVCE
Trigger: CTCACACACTCCTCCCATCAATGGATCAGACAGCAT...TTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp ACTTCCACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACTGGTGTTGATGGATTaGACGGAAAACTACTGCTGG +
Preference number: 5 (lower is better)
Translates to: TSTVSGEIETVSDCAEATLVLMD*TENYCW
Trigger: CCAGCAGTAGTTTTCCGTCAAATCCATCAACACCAG...TGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGTGGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTCTTGCCCTCCAGGTCTaGGCCACTGACTGGTACCTG +
Preference number: 5 (lower is better)
Translates to: VANISWADVLSDELPIFTLALQV*ATDWYL
Trigger: CAGGTACCAGTCAGTGGCCAAGACCTGGAGGGCAAG...AGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp ACTTCCACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACAGATGAGTTCCAACCATaGAAGCTGATCGACTGCTTG +
Preference number: 5 (lower is better)
Translates to: TSTVSGEIETVSDCAEATDEFQP*KLIDCL
Trigger: CAAGCAGTCGATCAGCTTCAATGGTTGGAACTCATC...TGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGTGGAAGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CAA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGAAGCGTTCTCTGGCATaGTTAGCCATCCGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: VLMRRGHLLSSLLITLELKRSLA*LAIRLS
Trigger: GGAGAGGCGGATGGCTAACAATGCCAGAGAACGCTT...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CCCTTCCTTTTTAAGACACTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTAAGCGTTCTCTGGCATaGTTAGCCATCCGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: PFLFKTLIGMPGMLRANGKRSLA*LAIRLS
Trigger: GGAGAGGCGGATGGCTAACAATGCCAGAGAACGCTT...ACCATTGGCCCTTAGCATTCCCGGCATACCTATTAGTGTCTTAAAAAGGAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGGTGAGTGGAGAGATCAAGCGTTCTCTGGCATaGTTAGCCATCCGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: HLSIQFRHKATSTVSGEIKRSLA*LAIRLS
Trigger: GGAGAGGCGGATGGCTAACAATGCCAGAGAACGCTT...GATCTCTCCACTCACCGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CAA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGAAGCGTTCTCTGGCATaGTTAGCCATCCGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLKRSLA*LAIRLS
Trigger: GGAGAGGCGGATGGCTAACAATGCCAGAGAACGCTT...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp GAAGATGGAGGAGGAATGGGATTCATTCTTCCAGACAATACGTGTAAGTTTACTTTCCTGGCAGTGTGGTaGGCGGCTCTGCCGATACGG +
Preference number: 5 (lower is better)
Translates to: EDGGGMGFILPDNTCKFTFLAVW*AALPIR
Trigger: CCGTATCGGCAGAGCCGCCAACCACACTGCCAGGAA...AGTAAACTTACACGTATTGTCTGGAAGAATGAATCCCATTCCTCCTCCATCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560948.1
CDS-3UTR CAA 90 bp AGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAAGCTAAGGGCCAATGGTaGTCACTGCTTTGTTCTCTG +
Preference number: 5 (lower is better)
Translates to: SGEIETVSDCAEATHCLQAKGQW*SLLCSL
Trigger: CAGAGAACAAAGCAGTGACAACCATTGGCCCTTAGC...TTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp TATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCTGCACGTGACAGGGGCAGATGGTTaGCAGTTGATTAAATCACCC +
Preference number: 5 (lower is better)
Translates to: YAGNAKGQWLSLLCSLHVTGADG*QLIKSP
Trigger: GGGTGATTTAATCAACTGCAAACCATCTGCCCCTGT...CACGTGCAGAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCCTTGCCCTCCAGGTCTaGGCCACTGACTGGTACTTG +
Preference number: 5 (lower is better)
Translates to: TVSDCAEATHCLQQKICCLALQV*ATDWYL
Trigger: CAAGTACCAGTCAGTGGCCAAGACCTGGAGGGCAAG...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559703.1
ENST00000559710.5
CDS TCA 90 bp CACCTGAGGTCTCCCTTCAAAGACAACCTGGCTGATGTTTACATATaGCCCATAGGGTTGGTAGTTTCACTAAGCCCAGGATGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: HLRSPFKDNLADVYI*PIGLVVSLSPGWVP
Trigger: AGGAACCCATCCTGGGCTTAGTGAAACTACCAACCCTATGGGTCATATGTAAACATCAGCCAGGTTGTCTTTGAAGGGAGACCTCAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560948.1
CDS GCA 90 bp CGATACGGCAGAAACTTTTTCTTCTTCCCTTCTCTTAAGGCAGGCTaGTTTGGGGTTAAGGTTCCTCTCATTAAGTCAGTGGGAGCCCTG +
Preference number: 5 (lower is better)
Translates to: RYGRNFFFFPSLKAG*FGVKVPLIKSVGAL
Trigger: CAGGGCTCCCACTGACTTAATGAGAGGAACCTTAACCCCAAAGCAGCCTGCCTTAAGAGAAGGGAAGAAGAAAAAGTTTCTGCCGTATCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561454.1
CDS-3UTR CAA 90 bp CCCTTCCTTTTTAAGACACTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTCGATTAAAGTTCACTTaGGCCGGGAGAACGGGCTTG +
Preference number: 5 (lower is better)
Translates to: PFLFKTLIGMPGMLRANGRLKFT*AGRTGL
Trigger: CAAGCCCGTTCTCCCGGCCAAAGTGAACTTTAATCG...ACCATTGGCCCTTAGCATTCCCGGCATACCTATTAGTGTCTTAAAAAGGAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGCGATTAAAGTTCACTTaGGCCGGGAGAACGGGCTTG +
Preference number: 5 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLRLKFT*AGRTGL
Trigger: CAAGCCCGTTCTCCCGGCCAAAGTGAACTTTAATCG...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CTGACAAGTACTGGTTTAATGCTAATCTGGCTCATCATTTTGGGACAGGGGCAGCGATTAAAGTTCACTTaGGCCGGGAGAACGGGCTTG +
Preference number: 5 (lower is better)
Translates to: LTSTGLMLIWLIILGQGQRLKFT*AGRTGL
Trigger: CAAGCCCGTTCTCCCGGCCAAAGTGAACTTTAATCG...CTGCCCCTGTCCCAAAATGATGAGCCAGATTAGCATTAAACCAGTACTTGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp ATGAAAGGTGTTGGGGACAAGCCTTCATGGGCTCCTAATCGACTGTCATTCAAGTATAGCGGCCATGCGTaGTTGCTGGGGATTCATCTT +
Preference number: 5 (lower is better)
Translates to: MKGVGDKPSWAPNRLSFKYSGHA*LLGIHL
Trigger: AAGATGAATCCCCAGCAACAACGCATGGCCGCTATA...CTTGAATGACAGTCGATTAGGAGCCCATGAAGGCTTGTCCCCAACACCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561152.1
CDS-3UTR CAA 90 bp CTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTTAGGTCGCTCAGCTCCTaGTCGGTCCCTATAGCGGCC +
Preference number: 5 (lower is better)
Translates to: LLMEVLTSCFDRRITFEFRSLSS*SVPIAA
Trigger: GGCCGCTATAGGGACCGACAAGGAGCTGAGCGACCT...AAACTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CTGACAAGTACTGGTTTAATGCTAATCTGGCTCATCATTTTGGGACAGGGGCAGCCCAAGCCCCAGATCTaGTCTCAGGAGACTAGATTG +
Preference number: 5 (lower is better)
Translates to: LTSTGLMLIWLIILGQGQPKPQI*SQETRL
Trigger: CAATCTAGTCTCCTGAGACAAGATCTGGGGCTTGGG...CTGCCCCTGTCCCAAAATGATGAGCCAGATTAGCATTAAACCAGTACTTGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp TATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCTGCACGTGGATGAAAGCTGGACATaGGTGGAAGACTCGTGTTTA +
Preference number: 5 (lower is better)
Translates to: YAGNAKGQWLSLLCSLHVDESWT*VEDSCL
Trigger: TAAACACGAGTCTTCCACCAATGTCCAGCTTTCATC...CACGTGCAGAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp TCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAAACATCTTGCCCTCCAGGTCTaGGCCACTGACTGGTACCTG +
Preference number: 5 (lower is better)
Translates to: SDCAEATHCLQQKICCKHLALQV*ATDWYL
Trigger: CAGGTACCAGTCAGTGGCCAAGACCTGGAGGGCAAG...ATGTTTGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp AGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAAGATGAGTTCCAACCATaGAAGCTGATCGACTGCTTG +
Preference number: 5 (lower is better)
Translates to: SGEIETVSDCAEATHCLQDEFQP*KLIDCL
Trigger: CAAGCAGTCGATCAGCTTCAATGGTTGGAACTCATC...TTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGAAGCGTTCTCTGGCATaGTTAGCCATCCGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: HGLMFYLMSFLSSLLMEVKRSLA*LAIRLS
Trigger: GGAGAGGCGGATGGCTAACAATGCCAGAGAACGCTT...CACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGAAGCGTTCTCTGGCATaGTTAGCCATCCGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYEKRSLA*LAIRLS
Trigger: GGAGAGGCGGATGGCTAACAATGCCAGAGAACGCTT...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAAAGCGTTCTCTGGCATaGTTAGCCATCCGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: QSLIVQKRHTACNKRFVAKRSLA*LAIRLS
Trigger: GGAGAGGCGGATGGCTAACAATGCCAGAGAACGCTT...TGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp TATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCTGCACGTGGATGACTGCCACGGCTaGATGAAGAATAAGGAGTTT +
Preference number: 5 (lower is better)
Translates to: YAGNAKGQWLSLLCSLHVDDCHG*MKNKEF
Trigger: AAACTCCTTATTCTTCATCAAGCCGTGGCAGTCATC...CACGTGCAGAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTATCTCTCCCAGGGTTGTaGTGGTGGAAGACAGGTTTC +
Preference number: 5 (lower is better)
Translates to: LCSLHVNRFNVCWHQLSVSLPGL*WWKTGF
Trigger: GAAACCTGTCTTCCACCACAACAACCCTGGGAGAGA...TACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp AGGCTATGGTCACAGATGGTCTCTGCTTACCACTGTAAGGTAAATGTGCAAAGCTCTCTCCCAGGGTTGTaGTGGTGGAAGACAGGTTTC +
Preference number: 5 (lower is better)
Translates to: RLWSQMVSAYHCKVNVQSSLPGL*WWKTGF
Trigger: GAAACCTGTCTTCCACCACAACAACCCTGGGAGAGA...GCTTTGCACATTTACCTTACAGTGGTAAGCAGAGACCATCTGTGACCATAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CCCTTCCTTTTTAAGACACTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTTCTCTCCCAGGGTTGTaGTGGTGGAAGACAGGTTTC +
Preference number: 5 (lower is better)
Translates to: PFLFKTLIGMPGMLRANGSLPGL*WWKTGF
Trigger: GAAACCTGTCTTCCACCACAACAACCCTGGGAGAGA...ACCATTGGCCCTTAGCATTCCCGGCATACCTATTAGTGTCTTAAAAAGGAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCTTGCCCTCCAGGTCTaGGCCACTGACTGGTACTTG +
Preference number: 5 (lower is better)
Translates to: LMSFLSSLLMEVLTSCFDLALQV*ATDWYL
Trigger: CAAGTACCAGTCAGTGGCCAAGACCTGGAGGGCAAG...ATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559703.1
ENST00000559710.5
CDS TCA 90 bp AGCCCTGAGCCTGTTTTCATGAAACTAGATGGTCCCATCTGGGGGTaGTGGGACAGAATGACACATCAGGCATTAGATTCTCATAAGGAG +
Preference number: 5 (lower is better)
Translates to: SPEPVFMKLDGPIWG*WDRMTHQALDSHKE
Trigger: CTCCTTATGAGAATCTAATGCCTGATGTGTCATTCTGTCCCATCACCCCCAGATGGGACCATCTAGTTTCATGAAAACAGGCTCAGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561454.1
CDS CCA 90 bp GAGGATAACTCAAGCGGTCATGTGAATGAAGGTTGCCATAACTACTaGATTGAGACATGTGGGAAGTGGAGGTCCCCAGAATTCCACCAA +
Preference number: 5 (lower is better)
Translates to: EDNSSGHVNEGCHNY*IETCGKWRSPEFHQ
Trigger: TTGGTGGAATTCTGGGGACCTCCACTTCCCACATGTCTCAATCCAGTAGTTATGGCAACCTTCATTCACATGACCGCTTGAGTTATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000543579.5
ENST00000557843.5
ENST00000559609.5
ENST00000561235.5
ENST00000561346.5
CDS-3UTR CAA 90 bp CACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCATAGGAAGGACTTGGTaGACCACTTGTTCCCCAAGA +
Preference number: 5 (lower is better)
Translates to: HVNRFNVCWHQLSVDQLSIGRTW*TTCSPR
Trigger: TCTTGGGGAACAAGTGGTCAACCAAGTCCTTCCTAT...GGAAAGCTGATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCATAGGAAGGACTTGGTaGACCACTTGTTCCCCAAGA +
Preference number: 5 (lower is better)
Translates to: LIGMPGMLRANGCHCFVLIGRTW*TTCSPR
Trigger: TCTTGGGGAACAAGTGGTCAACCAAGTCCTTCCTAT...GAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATACCTATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCCCAAGCCCCAGATCTaGTCTCAGGAGACTAGATTG +
Preference number: 5 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITPKPQI*SQETRL
Trigger: CAATCTAGTCTCCTGAGACAAGATCTGGGGCTTGGG...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp AGGCTATGGTCACAGATGGTCTCTGCTTACCACTGTAAGGTAAATGTGCAAAGCGCTGGCTCATCCCATTaGATGAACTCCAAAGGTCAG +
Preference number: 5 (lower is better)
Translates to: RLWSQMVSAYHCKVNVQSAGSSH*MNSKGQ
Trigger: CTGACCTTTGGAGTTCATCAAATGGGATGAGCCAGC...GCTTTGCACATTTACCTTACAGTGGTAAGCAGAGACCATCTGTGACCATAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGATGCTGTCTGATCCATaGATGGGAGGAGTGTGTGAG +
Preference number: 5 (lower is better)
Translates to: VLMRRGHLLSSLLITLELMLSDP*MGGVCE
Trigger: CTCACACACTCCTCCCATCAATGGATCAGACAGCAT...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CAA 90 bp GCTGCACGGAGGAGGCTGGACTGTGACCATAAACTGTTCAGATTTAGAGATCAACTGGTGTTGATGGATTaGACGGAAAACTACTGCTGG +
Preference number: 5 (lower is better)
Translates to: AARRRLDCDHKLFRFRDQLVLMD*TENYCW
Trigger: CCAGCAGTAGTTTTCCGTCAAATCCATCAACACCAG...TTGATCTCTAAATCTGAACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGGTGAGTTTTCATAGCTaGGGGATGAAGGTGCTTGCC +
Preference number: 5 (lower is better)
Translates to: VLMRRGHLLSSLLITLELVSFHS*GMKVLA
Trigger: GGCAAGCACCTTCATCCCCAAGCTATGAAAACTCAC...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGTGAGTTTTCATAGCTaGGGGATGAAGGTGCTTGCC +
Preference number: 5 (lower is better)
Translates to: LCSLHVNRFNVCWHQLSVVSFHS*GMKVLA
Trigger: GGCAAGCACCTTCATCCCCAAGCTATGAAAACTCAC...TACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CAA 90 bp CTTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTAAGCTGATCGACTGCTaGCAACAAGGCTTGATCCTC +
Preference number: 5 (lower is better)
Translates to: LLPPVRFVSSDNLSCPSPKLIDC*QQGLIL
Trigger: GAGGATCAAGCCTTGTTGCAAGCAGTCGATCAGCTT...AGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCAAGCGTTCTCTGGCATaGTTAGCCATCCGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: SSDNLSCPSPYEERSPSIKRSLA*LAIRLS
Trigger: GGAGAGGCGGATGGCTAACAATGCCAGAGAACGCTT...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CTTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTTAAGGCAGGCTGCTTaGGGGTTAAGGTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: LLPPVRFVSSDNLSCPSPLRQAA*GLRFLS
Trigger: AGAGAGGAACCTTAACCCCAAAGCAGCCTGCCTTAA...AGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CAATGGTTGTCACTGCTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGTTAAGGCAGGCTGCTTaGGGGTTAAGGTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: QWLSLLCSLHVNRFNVCWLRQAA*GLRFLS
Trigger: AGAGAGGAACCTTAACCCCAAAGCAGCCTGCCTTAA...CCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAGCAGTGACAACCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CAA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGTTAAGGCAGGCTGCTTaGGGGTTAAGGTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLLRQAA*GLRFLS
Trigger: AGAGAGGAACCTTAACCCCAAAGCAGCCTGCCTTAA...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp GCTGCACGGAGGAGGCTGGACTGTGACCATAAACTGTTCAGATTTAGAGATCAAATCACACTACCTGCCTaGGTGACTACTGGGTTTTGT +
Preference number: 5 (lower is better)
Translates to: AARRRLDCDHKLFRFRDQITLPA*VTTGFC
Trigger: ACAAAACCCAGTAGTCACCAAGGCAGGTAGTGTGAT...TTGATCTCTAAATCTGAACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp ACTTCCACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACAAATGCTCGTGAAGTaGCTGCTCAACTCGATTTTT +
Preference number: 5 (lower is better)
Translates to: TSTVSGEIETVSDCAEATQMLVK*LLNSIF
Trigger: AAAAATCGAGTTGAGCAGCAACTTCACGAGCATTTG...TGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGTGGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333725.10
ENST00000438423.6
ENST00000559703.1
CDS-3UTR CAA 90 bp ATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGTCTTGTAGCGGCCATGCGTTGTaGCTGGGGATTCATCTTCGG +
Preference number: 5 (lower is better)
Translates to: MTDLLGIILIRVPEVLSCSGHAL*LGIHLR
Trigger: CCGAAGATGAATCCCCAGCAACAACGCATGGCCGCT...ACAAGACAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATTATAGCGGCCATGCGTaGTTGCTGGGGATTCATCTT +
Preference number: 5 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYYSGHA*LLGIHL
Trigger: AAGATGAATCCCCAGCAACAACGCATGGCCGCTATA...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCTATAGCGGCCATGCGTaGTTGCTGGGGATTCATCTT +
Preference number: 5 (lower is better)
Translates to: TVSDCAEATHCLQQKICCYSGHA*LLGIHL
Trigger: AAGATGAATCCCCAGCAACAACGCATGGCCGCTATA...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCATATAGCGGCCATGCGTaGTTGCTGGGGATTCATCTT +
Preference number: 5 (lower is better)
Translates to: QSLIVQKRHTACNKRFVAYSGHA*LLGIHL
Trigger: AAGATGAATCCCCAGCAACAACGCATGGCCGCTATA...TGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp TCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTTATAGCGGCCATGCGTaGTTGCTGGGGATTCATCTT +
Preference number: 5 (lower is better)
Translates to: SRQSLIVQKRHTACNKRFYSGHA*LLGIHL
Trigger: AAGATGAATCCCCAGCAACAACGCATGGCCGCTATA...AAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp AGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAATTGTTCCCCAAGATGTaGTACCTCCTCTTTCATCAA +
Preference number: 5 (lower is better)
Translates to: SGEIETVSDCAEATHCLQLFPKM*YLLFHQ
Trigger: TTGATGAAAGAGGAGGTACAACATCTTGGGGAACAA...TTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CTGACAAGTACTGGTTTAATGCTAATCTGGCTCATCATTTTGGGACAGGGGCAGAATCATAGGAAGGACTaGGTTGACCACTTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: LTSTGLMLIWLIILGQGQNHRKD*VDHLFP
Trigger: GGGGAACAAGTGGTCAACCAAGTCCTTCCTATGATT...CTGCCCCTGTCCCAAAATGATGAGCCAGATTAGCATTAAACCAGTACTTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTCCCAAGCCCCAGATCTaGTCTCAGGAGACTAGATTG +
Preference number: 5 (lower is better)
Translates to: VANISWADVLSDELPIFTPKPQI*SQETRL
Trigger: CAATCTAGTCTCCTGAGACAAGATCTGGGGCTTGGG...AGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GCTGCACGGAGGAGGCTGGACTGTGACCATAAACTGTTCAGATTTAGAGATCAAATTGTGGGTCCCATCTaGCATAAAGAAAGTGCTAGC +
Preference number: 5 (lower is better)
Translates to: AARRRLDCDHKLFRFRDQIVGPI*HKESAS
Trigger: GCTAGCACTTTCTTTATGCAAGATGGGACCCACAAT...TTGATCTCTAAATCTGAACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GCTGCACGGAGGAGGCTGGACTGTGACCATAAACTGTTCAGATTTAGAGATCAACAAAGGTCAGAAGAATaGTGGGTCCCATCTTGCATA +
Preference number: 5 (lower is better)
Translates to: AARRRLDCDHKLFRFRDQQRSEE*WVPSCI
Trigger: TATGCAAGATGGGACCCACAATTCTTCTGACCTTTG...TTGATCTCTAAATCTGAACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCCAAAGGTCAGAAGAATaGTGGGTCCCATCTTGCATA +
Preference number: 5 (lower is better)
Translates to: HVNRFNVCWHQLSVDQLSQRSEE*WVPSCI
Trigger: TATGCAAGATGGGACCCACAATTCTTCTGACCTTTG...GGAAAGCTGATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGGCTGGCTCATCCCATTaGATGAACTCCAAAGGTCAG +
Preference number: 5 (lower is better)
Translates to: HGLMFYLMSFLSSLLMEVAGSSH*MNSKGQ
Trigger: CTGACCTTTGGAGTTCATCAAATGGGATGAGCCAGC...CACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GCTGCACGGAGGAGGCTGGACTGTGACCATAAACTGTTCAGATTTAGAGATCAATCGTGTTTATGTCTGTaGGTGAAACTGAGTGTGGAG +
Preference number: 5 (lower is better)
Translates to: AARRRLDCDHKLFRFRDQSCLCL*VKLSVE
Trigger: CTCCACACTCAGTTTCACCAACAGACATAAACACGA...TTGATCTCTAAATCTGAACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GCTGCACGGAGGAGGCTGGACTGTGACCATAAACTGTTCAGATTTAGAGATCAAGATGAAAGCTGGACATaGGTGGAAGACTCGTGTTTA +
Preference number: 5 (lower is better)
Translates to: AARRRLDCDHKLFRFRDQDESWT*VEDSCL
Trigger: TAAACACGAGTCTTCCACCAATGTCCAGCTTTCATC...TTGATCTCTAAATCTGAACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp TCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTATGCTGTCTGATCCATaGATGGGAGGAGTGTGTGAG +
Preference number: 5 (lower is better)
Translates to: SRQSLIVQKRHTACNKRFMLSDP*MGGVCE
Trigger: CTCACACACTCCTCCCATCAATGGATCAGACAGCAT...AAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGATGCTGTCTGATCCATaGATGGGAGGAGTGTGTGAG +
Preference number: 5 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEEMLSDP*MGGVCE
Trigger: CTCACACACTCCTCCCATCAATGGATCAGACAGCAT...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CAA 90 bp CTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCGTGATCCAACTGGTGTaGATGGATTTGACGGAAAAC +
Preference number: 5 (lower is better)
Translates to: LIGMPGMLRANGCHCFVLVIQLV*MDLTEN
Trigger: GTTTTCCGTCAAATCCATCAACACCAGTTGGATCAC...GAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATACCTATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTGTGAGTTTTCATAGCTaGGGGATGAAGGTGCTTGCC +
Preference number: 5 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITVSFHS*GMKVLA
Trigger: GGCAAGCACCTTCATCCCCAAGCTATGAAAACTCAC...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGTGAGTTTTCATAGCTaGGGGATGAAGGTGCTTGCC +
Preference number: 5 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYEVSFHS*GMKVLA
Trigger: GGCAAGCACCTTCATCCCCAAGCTATGAAAACTCAC...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGGTGAGTTTTCATAGCTaGGGGATGAAGGTGCTTGCC +
Preference number: 5 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEEVSFHS*GMKVLA
Trigger: GGCAAGCACCTTCATCCCCAAGCTATGAAAACTCAC...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGTGAGTTTTCATAGCTaGGGGATGAAGGTGCTTGCC +
Preference number: 5 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYVSFHS*GMKVLA
Trigger: GGCAAGCACCTTCATCCCCAAGCTATGAAAACTCAC...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTAAGCTGATCGACTGCTaGCAACAAGGCTTGATCCTC +
Preference number: 5 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITKLIDC*QQGLIL
Trigger: GAGGATCAAGCCTTGTTGCAAGCAGTCGATCAGCTT...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGAAGCTGATCGACTGCTaGCAACAAGGCTTGATCCTC +
Preference number: 5 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYEKLIDC*QQGLIL
Trigger: GAGGATCAAGCCTTGTTGCAAGCAGTCGATCAGCTT...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGAAGCTGATCGACTGCTaGCAACAAGGCTTGATCCTC +
Preference number: 5 (lower is better)
Translates to: HGLMFYLMSFLSSLLMEVKLIDC*QQGLIL
Trigger: GAGGATCAAGCCTTGTTGCAAGCAGTCGATCAGCTT...CACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CCCTTCCTTTTTAAGACACTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTGATGAGTTCCAACCATaGAAGCTGATCGACTGCTTG +
Preference number: 5 (lower is better)
Translates to: PFLFKTLIGMPGMLRANGDEFQP*KLIDCL
Trigger: CAAGCAGTCGATCAGCTTCAATGGTTGGAACTCATC...ACCATTGGCCCTTAGCATTCCCGGCATACCTATTAGTGTCTTAAAAAGGAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CTTCTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTGATGAGTTCCAACCATaGAAGCTGATCGACTGCTTG +
Preference number: 5 (lower is better)
Translates to: LLPPVRFVSSDNLSCPSPDEFQP*KLIDCL
Trigger: CAAGCAGTCGATCAGCTTCAATGGTTGGAACTCATC...AGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATTTAAGGCAGGCTGCTTaGGGGTTAAGGTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYLRQAA*GLRFLS
Trigger: AGAGAGGAACCTTAACCCCAAAGCAGCCTGCCTTAA...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCGAAGCGACACACTGCTaGCAACAAAAGATTTGTTGC +
Preference number: 5 (lower is better)
Translates to: HVNRFNVCWHQLSVDQLSEATHC*QQKICC
Trigger: GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTC...GGAAAGCTGATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CAA 90 bp GCTGCACGGAGGAGGCTGGACTGTGACCATAAACTGTTCAGATTTAGAGATCAAGAAGCGACACACTGCTaGCAACAAAAGATTTGTTGC +
Preference number: 5 (lower is better)
Translates to: AARRRLDCDHKLFRFRDQEATHC*QQKICC
Trigger: GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTC...TTGATCTCTAAATCTGAACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp ACGGTGAGTGGAGAGATCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCGTAGTTACAATGCATTaGTCAATTCAGTTTAGGCAC +
Preference number: 5 (lower is better)
Translates to: TVSGEIETVSDCAEATHCVVTMH*SIQFRH
Trigger: GTGCCTAAACTGAATTGACAAATGCATTGTAACTAC...GCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGATCTCTCCACTCACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CAA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCGCTAAGGGCCAATGGTaGTCACTGCTTTGTTCTCTG +
Preference number: 5 (lower is better)
Translates to: TVSDCAEATHCLQQKICCAKGQW*SLLCSL
Trigger: CAGAGAACAAAGCAGTGACAACCATTGGCCCTTAGC...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGATCACACTACCTGCCTaGGTGACTACTGGGTTTTGT +
Preference number: 5 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLITLPA*VTTGFC
Trigger: ACAAAACCCAGTAGTCACCAAGGCAGGTAGTGTGAT...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp AGGCTATGGTCACAGATGGTCTCTGCTTACCACTGTAAGGTAAATGTGCAAAGCACAGGGGCAGATGGTTaGCAGTTGATTAAATCACCC +
Preference number: 5 (lower is better)
Translates to: RLWSQMVSAYHCKVNVQSTGADG*QLIKSP
Trigger: GGGTGATTTAATCAACTGCAAACCATCTGCCCCTGT...GCTTTGCACATTTACCTTACAGTGGTAAGCAGAGACCATCTGTGACCATAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp TGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATACAGGGGCAGATGGTTaGCAGTTGATTAAATCACCC +
Preference number: 5 (lower is better)
Translates to: CSLHVNRFNVCWHQLSVDTGADG*QLIKSP
Trigger: GGGTGATTTAATCAACTGCAAACCATCTGCCCCTGT...ATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp AAGCTACATAGTGATTTGGGTCCTTTCCTCTGTGTGCTGATTGCCACTGTTGATATCTGGCTCATCATTTaGGGACAGGGGCAGATGGTT +
Preference number: 5 (lower is better)
Translates to: KLHSDLGPFLCVLIATVDIWLII*GQGQMV
Trigger: AACCATCTGCCCCTGTCCCAAAATGATGAGCCAGAT...ATCAACAGTGGCAATCAGCACACAGAGGAAAGGACCCAAATCACTATGTAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCATCTGGCTCATCATTTaGGGACAGGGGCAGATGGTT +
Preference number: 5 (lower is better)
Translates to: TVSDCAEATHCLQQKICCIWLII*GQGQMV
Trigger: AACCATCTGCCCCTGTCCCAAAATGATGAGCCAGAT...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTCTCTCCCAGGGTTGTaGTGGTGGAAGACAGGTTTC +
Preference number: 5 (lower is better)
Translates to: SSDNLSCPSPYEERSPSISLPGL*WWKTGF
Trigger: GAAACCTGTCTTCCACCACAACAACCCTGGGAGAGA...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATTCTCTCCCAGGGTTGTaGTGGTGGAAGACAGGTTTC +
Preference number: 5 (lower is better)
Translates to: LMSFLSSLLMEVLTSCFDSLPGL*WWKTGF
Trigger: GAAACCTGTCTTCCACCACAACAACCCTGGGAGAGA...ATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GCTGCACGGAGGAGGCTGGACTGTGACCATAAACTGTTCAGATTTAGAGATCAACTAGGAGATTCACGGTaGAAATCATCTGAATTTGGG +
Preference number: 5 (lower is better)
Translates to: AARRRLDCDHKLFRFRDQLGDSR*KSSEFG
Trigger: CCCAAATTCAGATGATTTCAACCGTGAATCTCCTAG...TTGATCTCTAAATCTGAACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGGCTGGCTCATCCCATTaGATGAACTCCAAAGGTCAG +
Preference number: 5 (lower is better)
Translates to: DVLSDELPIFTSDGSVDQAGSSH*MNSKGQ
Trigger: CTGACCTTTGGAGTTCATCAAATGGGATGAGCCAGC...CTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCGCTGGCTCATCCCATTaGATGAACTCCAAAGGTCAG +
Preference number: 5 (lower is better)
Translates to: SSDNLSCPSPYEERSPSIAGSSH*MNSKGQ
Trigger: CTGACCTTTGGAGTTCATCAAATGGGATGAGCCAGC...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CAA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGTCGTGTTTATGTCTGTaGGTGAAACTGAGTGTGGAG +
Preference number: 5 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLSCLCL*VKLSVE
Trigger: CTCCACACTCAGTTTCACCAACAGACATAAACACGA...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CAA 90 bp CAGGGTTGTTGTGGTGGAAGACAGGTTTCATGGAAGTTCAAAGTGATTATGTCTATGCTGTCTGATCCATaGATGGGAGGAGTGTGTGAG +
Preference number: 5 (lower is better)
Translates to: QGCCGGRQVSWKFKVIMSMLSDP*MGGVCE
Trigger: CTCACACACTCCTCCCATCAATGGATCAGACAGCAT...AGACATAATCACTTTGAACTTCCATGAAACCTGTCTTCCACCACAACAACCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCATGCTGTCTGATCCATaGATGGGAGGAGTGTGTGAG +
Preference number: 5 (lower is better)
Translates to: SSDNLSCPSPYEERSPSIMLSDP*MGGVCE
Trigger: CTCACACACTCCTCCCATCAATGGATCAGACAGCAT...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CAA 90 bp GATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGATGCTGTCTGATCCATaGATGGGAGGAGTGTGTGAG +
Preference number: 5 (lower is better)
Translates to: DVLSDELPIFTSDGSVDQMLSDP*MGGVCE
Trigger: CTCACACACTCCTCCCATCAATGGATCAGACAGCAT...CTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCCTGGTGTTGATGGATTaGACGGAAAACTACTGCTGG +
Preference number: 5 (lower is better)
Translates to: TVSDCAEATHCLQQKICCLVLMD*TENYCW
Trigger: CCAGCAGTAGTTTTCCGTCAAATCCATCAACACCAG...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATCTGGTGTTGATGGATTaGACGGAAAACTACTGCTGG +
Preference number: 5 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYLVLMD*TENYCW
Trigger: CCAGCAGTAGTTTTCCGTCAAATCCATCAACACCAG...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
CDS-3UTR CAA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGCTGGTGTTGATGGATTaGACGGAAAACTACTGCTGG +
Preference number: 5 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYELVLMD*TENYCW
Trigger: CCAGCAGTAGTTTTCCGTCAAATCCATCAACACCAG...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CAA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGGTGATCCAACTGGTGTaGATGGATTTGACGGAAAAC +
Preference number: 5 (lower is better)
Translates to: VLMRRGHLLSSLLITLELVIQLV*MDLTEN
Trigger: GTTTTCCGTCAAATCCATCAACACCAGTTGGATCAC...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CAA 90 bp CTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATGTGAGTTTTCATAGCTaGGGGATGAAGGTGCTTGCC +
Preference number: 5 (lower is better)
Translates to: LMSFLSSLLMEVLTSCFDVSFHS*GMKVLA
Trigger: GGCAAGCACCTTCATCCCCAAGCTATGAAAACTCAC...ATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp TTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCAAGCTGATCGACTGCTaGCAACAAGGCTTGATCCTC +
Preference number: 5 (lower is better)
Translates to: FYLMSFLSSLLMEVLTSCKLIDC*QQGLIL
Trigger: GAGGATCAAGCCTTGTTGCAAGCAGTCGATCAGCTT...GCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGATGAGTTCCAACCATaGAAGCTGATCGACTGCTTG +
Preference number: 5 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYDEFQP*KLIDCL
Trigger: CAAGCAGTCGATCAGCTTCAATGGTTGGAACTCATC...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp GTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGATGACTGCCACGGCTaGATGAAGAATAAGGAGTTT +
Preference number: 5 (lower is better)
Translates to: VQVLMRRGHLLSSLLITLDDCHG*MKNKEF
Trigger: AAACTCCTTATTCTTCATCAAGCCGTGGCAGTCATC...CAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTTAAGGCAGGCTGCTTaGGGGTTAAGGTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: SSDNLSCPSPYEERSPSILRQAA*GLRFLS
Trigger: AGAGAGGAACCTTAACCCCAAAGCAGCCTGCCTTAA...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp GATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTAAGGCAGGCTGCTTaGGGGTTAAGGTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: DVLSDELPIFTSDGSVDQLRQAA*GLRFLS
Trigger: AGAGAGGAACCTTAACCCCAAAGCAGCCTGCCTTAA...CTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CAATGGTTGTCACTGCTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCTTCTGATGGAAGTGTaGACCAGTTGCTTTGATCGT +
Preference number: 5 (lower is better)
Translates to: QWLSLLCSLHVNRFNVCWLLMEV*TSCFDR
Trigger: ACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG...CCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAGCAGTGACAACCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CAA 90 bp TGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATGAAGCGACACACTGCTaGCAACAAAAGATTTGTTGC +
Preference number: 5 (lower is better)
Translates to: CSLHVNRFNVCWHQLSVDEATHC*QQKICC
Trigger: GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTC...ATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CAA 90 bp GATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGGCTAAGGGCCAATGGTaGTCACTGCTTTGTTCTCTG +
Preference number: 5 (lower is better)
Translates to: DVLSDELPIFTSDGSVDQAKGQW*SLLCSL
Trigger: CAGAGAACAAAGCAGTGACAACCATTGGCCCTTAGC...CTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp TATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCTGCACGTGTGTAGTACTTACTGCTaGGAAAACAAAGCGATTTCT +
Preference number: 5 (lower is better)
Translates to: YAGNAKGQWLSLLCSLHVCSTYC*ENKAIS
Trigger: AGAAATCGCTTTGTTTTCCAAGCAGTAAGTACTACA...CACGTGCAGAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAATCACACTACCTGCCTaGGTGACTACTGGGTTTTGT +
Preference number: 5 (lower is better)
Translates to: QSLIVQKRHTACNKRFVAITLPA*VTTGFC
Trigger: ACAAAACCCAGTAGTCACCAAGGCAGGTAGTGTGAT...TGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCGCAGATGGTTTGCAGTaGATTAAATCACCCACTCAA +
Preference number: 5 (lower is better)
Translates to: LIGMPGMLRANGCHCFVLADGLQ*IKSPTQ
Trigger: TTGAGTGGGTGATTTAATCAACTGCAAACCATCTGC...GAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATACCTATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATATCTGGCTCATCATTTaGGGACAGGGGCAGATGGTT +
Preference number: 5 (lower is better)
Translates to: LMSFLSSLLMEVLTSCFDIWLII*GQGQMV
Trigger: AACCATCTGCCCCTGTCCCAAAATGATGAGCCAGAT...ATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCGTTTGTCTAGTTTGTTaGAGGTTCTTGCTTGGCATG +
Preference number: 5 (lower is better)
Translates to: HVNRFNVCWHQLSVDQLSVCLVC*RFLLGM
Trigger: CATGCCAAGCAAGAACCTCAAACAAACTAGACAAAC...GGAAAGCTGATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR CAA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGGTGAGTGGAGAGATCGAAGGACATTGCATCTaGCAAATGCTCGTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: HLSIQFRHKATSTVSGEIEGHCI*QMLVKL
Trigger: CAACTTCACGAGCATTTGCAAGATGCAATGTCCTTC...GATCTCTCCACTCACCGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333725.10
ENST00000438423.6
ENST00000559703.1
CDS CCA 90 bp GGTCCCATCTTGCATAAAGAAAGTGCTAGCGAACATACTGGTTGGTaGCTTAGGAGATGGATAACTAGGAGATTCACGGTTGAAATCATC +
Preference number: 5 (lower is better)
Translates to: GPILHKESASEHTGW*LRRWITRRFTVEII
Trigger: GATGATTTCAACCGTGAATCTCCTAGTTATCCATCTCCTAAGCCACCAACCAGTATGTTCGCTAGCACTTTCTTTATGCAAGATGGGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000543579.5
ENST00000557843.5
ENST00000559609.5
ENST00000561235.5
ENST00000561346.5
CDS-3UTR CAA 90 bp TTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCATAGGAAGGACTTGGTaGACCACTTGTTCCCCAAGA +
Preference number: 5 (lower is better)
Translates to: FYLMSFLSSLLMEVLTSCIGRTW*TTCSPR
Trigger: TCTTGGGGAACAAGTGGTCAACCAAGTCCTTCCTAT...GCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTATAGGAAGGACTTGGTaGACCACTTGTTCCCCAAGA +
Preference number: 5 (lower is better)
Translates to: LSDELPIFTSDGSVDQLLIGRTW*TTCSPR
Trigger: TCTTGGGGAACAAGTGGTCAACCAAGTCCTTCCTAT...AAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGAATCATAGGAAGGACTaGGTTGACCACTTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: DVLSDELPIFTSDGSVDQNHRKD*VDHLFP
Trigger: GGGGAACAAGTGGTCAACCAAGTCCTTCCTATGATT...CTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp TGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCACATTAACTTTTTCCCTAATCATAGGAAGGACTaGGTTGACCACTTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: CMLASAECRSAFHINFFPNHRKD*VDHLFP
Trigger: GGGGAACAAGTGGTCAACCAAGTCCTTCCTATGATT...AGGGAAAAAGTTAATGTGGAAAGCTGATCTACACTCAGCTGATGCCAGCATACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTACTAGGAGATTCACGGTaGAAATCATCTGAATTTGGG +
Preference number: 5 (lower is better)
Translates to: LCSLHVNRFNVCWHQLSVLGDSR*KSSEFG
Trigger: CCCAAATTCAGATGATTTCAACCGTGAATCTCCTAG...TACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGATTGTGGGTCCCATCTaGCATAAAGAAAGTGCTAGC +
Preference number: 5 (lower is better)
Translates to: HGLMFYLMSFLSSLLMEVIVGPI*HKESAS
Trigger: GCTAGCACTTTCTTTATGCAAGATGGGACCCACAAT...CACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTATTGTGGGTCCCATCTaGCATAAAGAAAGTGCTAGC +
Preference number: 5 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITIVGPI*HKESAS
Trigger: GCTAGCACTTTCTTTATGCAAGATGGGACCCACAAT...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CAA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGCAAAGGTCAGAAGAATaGTGGGTCCCATCTTGCATA +
Preference number: 5 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEEQRSEE*WVPSCI
Trigger: TATGCAAGATGGGACCCACAATTCTTCTGACCTTTG...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CAA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATCAAAGGTCAGAAGAATaGTGGGTCCCATCTTGCATA +
Preference number: 5 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYQRSEE*WVPSCI
Trigger: TATGCAAGATGGGACCCACAATTCTTCTGACCTTTG...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp TTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCAGCTGGCTCATCCCATTaGATGAACTCCAAAGGTCAG +
Preference number: 5 (lower is better)
Translates to: LLQTSHGLMFYLMSFLSSAGSSH*MNSKGQ
Trigger: CTGACCTTTGGAGTTCATCAAATGGGATGAGCCAGC...TGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCTCGTGTTTATGTCTGTaGGTGAAACTGAGTGTGGAG +
Preference number: 5 (lower is better)
Translates to: TVSDCAEATHCLQQKICCSCLCL*VKLSVE
Trigger: CTCCACACTCAGTTTCACCAACAGACATAAACACGA...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGGATGAAAGCTGGACATaGGTGGAAGACTCGTGTTTA +
Preference number: 5 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEEDESWT*VEDSCL
Trigger: TAAACACGAGTCTTCCACCAATGTCCAGCTTTCATC...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CAA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTGATGAAAGCTGGACATaGGTGGAAGACTCGTGTTTA +
Preference number: 5 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITDESWT*VEDSCL
Trigger: TAAACACGAGTCTTCCACCAATGTCCAGCTTTCATC...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CAA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGATGAAAGCTGGACATaGGTGGAAGACTCGTGTTTA +
Preference number: 5 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYDESWT*VEDSCL
Trigger: TAAACACGAGTCTTCCACCAATGTCCAGCTTTCATC...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
CDS-3UTR CAA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCGTGATCCAACTGGTGTaGATGGATTTGACGGAAAAC +
Preference number: 5 (lower is better)
Translates to: TVSDCAEATHCLQQKICCVIQLV*MDLTEN
Trigger: GTTTTCCGTCAAATCCATCAACACCAGTTGGATCAC...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTGTGATCCAACTGGTGTaGATGGATTTGACGGAAAAC +
Preference number: 5 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITVIQLV*MDLTEN
Trigger: GTTTTCCGTCAAATCCATCAACACCAGTTGGATCAC...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CAA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGTGATCCAACTGGTGTaGATGGATTTGACGGAAAAC +
Preference number: 5 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYEVIQLV*MDLTEN
Trigger: GTTTTCCGTCAAATCCATCAACACCAGTTGGATCAC...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CAA 90 bp TCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGGTGAGTTTTCATAGCTaGGGGATGAAGGTGCTTGCC +
Preference number: 5 (lower is better)
Translates to: SLLMEVLTSCFDRRITFEVSFHS*GMKVLA
Trigger: GGCAAGCACCTTCATCCCCAAGCTATGAAAACTCAC...CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp TTTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCAAGCTGATCGACTGCTaGCAACAAGGCTTGATCCTC +
Preference number: 5 (lower is better)
Translates to: FVANISWADVLSDELPIFKLIDC*QQGLIL
Trigger: GAGGATCAAGCCTTGTTGCAAGCAGTCGATCAGCTT...GAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp GCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACGATGAGTTCCAACCATaGAAGCTGATCGACTGCTTG +
Preference number: 5 (lower is better)
Translates to: ADVLSDELPIFTSDGSVDDEFQP*KLIDCL
Trigger: CAAGCAGTCGATCAGCTTCAATGGTTGGAACTCATC...GTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCGATGAGTTCCAACCATaGAAGCTGATCGACTGCTTG +
Preference number: 5 (lower is better)
Translates to: SSDNLSCPSPYEERSPSIDEFQP*KLIDCL
Trigger: CAAGCAGTCGATCAGCTTCAATGGTTGGAACTCATC...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CTAATAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGTCACTGCTTTGTTCTCCCTCTAGATGAAACCTaGATATCTTTTTGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: LIGMPGMLRANGCHCFVLPLDET*ISFWED
Trigger: ATCCTCCCAAAAAGATATCAAGGTTTCATCTAGAGG...GAGAACAAAGCAGTGACAACCATTGGCCCTTAGCATTCCCGGCATACCTATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGATGACTGCCACGGCTaGATGAAGAATAAGGAGTTT +
Preference number: 5 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYDDCHG*MKNKEF
Trigger: AAACTCCTTATTCTTCATCAAGCCGTGGCAGTCATC...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp TCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAAACATTTAAGGCAGGCTGCTTaGGGGTTAAGGTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: SDCAEATHCLQQKICCKHLRQAA*GLRFLS
Trigger: AGAGAGGAACCTTAACCCCAAAGCAGCCTGCCTTAA...ATGTTTGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTTCTGATGGAAGTGTaGACCAGTTGCTTTGATCGT +
Preference number: 5 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITLLMEV*TSCFDR
Trigger: ACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp AAGCTACATAGTGATTTGGGTCCTTTCCTCTGTGTGCTGATTGCCACTGTTGATCTTCTGATGGAAGTGTaGACCAGTTGCTTTGATCGT +
Preference number: 5 (lower is better)
Translates to: KLHSDLGPFLCVLIATVDLLMEV*TSCFDR
Trigger: ACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG...ATCAACAGTGGCAATCAGCACACAGAGGAAAGGACCCAAATCACTATGTAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp TGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATGCAACAAAAGATTTGTaGCAAACATCTCATGGGCTG +
Preference number: 5 (lower is better)
Translates to: CSLHVNRFNVCWHQLSVDATKDL*QTSHGL
Trigger: CAGCCCATGAGATGTTTGCAACAAATCTTTTGTTGC...ATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CAA 90 bp CATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGGAAGCGACACACTGCTaGCAACAAAAGATTTGTTGC +
Preference number: 5 (lower is better)
Translates to: HGLMFYLMSFLSSLLMEVEATHC*QQKICC
Trigger: GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTC...CACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp TCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGGCTAAGGGCCAATGGTaGTCACTGCTTTGTTCTCTG +
Preference number: 5 (lower is better)
Translates to: SLLMEVLTSCFDRRITFEAKGQW*SLLCSL
Trigger: CAGAGAACAAAGCAGTGACAACCATTGGCCCTTAGC...CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTATCACACTACCTGCCTaGGTGACTACTGGGTTTTGT +
Preference number: 5 (lower is better)
Translates to: VANISWADVLSDELPIFTITLPA*VTTGFC
Trigger: ACAAAACCCAGTAGTCACCAAGGCAGGTAGTGTGAT...AGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTACAGGGGCAGATGGTTaGCAGTTGATTAAATCACCC +
Preference number: 5 (lower is better)
Translates to: VANISWADVLSDELPIFTTGADG*QLIKSP
Trigger: GGGTGATTTAATCAACTGCAAACCATCTGCCCCTGT...AGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGACAGGGGCAGATGGTTaGCAGTTGATTAAATCACCC +
Preference number: 5 (lower is better)
Translates to: DVLSDELPIFTSDGSVDQTGADG*QLIKSP
Trigger: GGGTGATTTAATCAACTGCAAACCATCTGCCCCTGT...CTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp AGGCTATGGTCACAGATGGTCTCTGCTTACCACTGTAAGGTAAATGTGCAAAGCCAAATGCTCGTGAAGTaGCTGCTCAACTCGATTTTT +
Preference number: 5 (lower is better)
Translates to: RLWSQMVSAYHCKVNVQSQMLVK*LLNSIF
Trigger: AAAAATCGAGTTGAGCAGCAACTTCACGAGCATTTG...GCTTTGCACATTTACCTTACAGTGGTAAGCAGAGACCATCTGTGACCATAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333725.10
ENST00000438423.6
CDS-3UTR CAA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAAGGACATTGCATCTaGCAAATGCTCGTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYEEGHCI*QMLVKL
Trigger: CAACTTCACGAGCATTTGCAAGATGCAATGTCCTTC...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333725.10
ENST00000438423.6
ENST00000543579.5
ENST00000559703.1
CDS TCA 90 bp CTGATCGACTGCTTGCAACAAGGCTTGATCCTCCATAGTTTGAATTaGGGCTTCCAATTGGTGCATTATGGGATGGTCCCAATAAACTAT +
Preference number: 5 (lower is better)
Translates to: LIDCLQQGLILHSLN*GFQLVHYGMVPINY
Trigger: ATAGTTTATTGGGACCATCCCATAATGCACCAATTGGAAGCCTCAATTCAAACTATGGAGGATCAAGCCTTGTTGCAAGCAGTCGATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000558210.5
ENST00000559609.5
ENST00000559703.1
ENST00000559710.5
ENST00000560506.5
ENST00000560764.5
ENST00000561420.5
ENST00000561449.1
CDS-3UTR CAA 90 bp AAGCTACATAGTGATTTGGGTCCTTTCCTCTGTGTGCTGATTGCCACTGTTGATTTGTTCCCCAAGATGTaGTACCTCCTCTTTCATCAA +
Preference number: 5 (lower is better)
Translates to: KLHSDLGPFLCVLIATVDLFPKM*YLLFHQ
Trigger: TTGATGAAAGAGGAGGTACAACATCTTGGGGAACAA...ATCAACAGTGGCAATCAGCACACAGAGGAAAGGACCCAAATCACTATGTAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGTTCCCCAAGATGTaGTACCTCCTCTTTCATCAA +
Preference number: 5 (lower is better)
Translates to: HGLMFYLMSFLSSLLMEVLFPKM*YLLFHQ
Trigger: TTGATGAAAGAGGAGGTACAACATCTTGGGGAACAA...CACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATCTAGGAGATTCACGGTaGAAATCATCTGAATTTGGG +
Preference number: 5 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYLGDSR*KSSEFG
Trigger: CCCAAATTCAGATGATTTCAACCGTGAATCTCCTAG...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
CDS-3UTR CAA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGCTAGGAGATTCACGGTaGAAATCATCTGAATTTGGG +
Preference number: 5 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYELGDSR*KSSEFG
Trigger: CCCAAATTCAGATGATTTCAACCGTGAATCTCCTAG...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CAA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCATTGTGGGTCCCATCTaGCATAAAGAAAGTGCTAGC +
Preference number: 5 (lower is better)
Translates to: SSDNLSCPSPYEERSPSIIVGPI*HKESAS
Trigger: GCTAGCACTTTCTTTATGCAAGATGGGACCCACAAT...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CAA 90 bp GATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTCGTGTTTATGTCTGTaGGTGAAACTGAGTGTGGAG +
Preference number: 5 (lower is better)
Translates to: DVLSDELPIFTSDGSVDQSCLCL*VKLSVE
Trigger: CTCCACACTCAGTTTCACCAACAGACATAAACACGA...CTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCGTGTTTATGTCTGTaGGTGAAACTGAGTGTGGAG +
Preference number: 5 (lower is better)
Translates to: VANISWADVLSDELPIFTSCLCL*VKLSVE
Trigger: CTCCACACTCAGTTTCACCAACAGACATAAACACGA...AGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTCGTGTTTATGTCTGTaGGTGAAACTGAGTGTGGAG +
Preference number: 5 (lower is better)
Translates to: SSDNLSCPSPYEERSPSISCLCL*VKLSVE
Trigger: CTCCACACTCAGTTTCACCAACAGACATAAACACGA...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CAA 90 bp GCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACTCGTGTTTATGTCTGTaGGTGAAACTGAGTGTGGAG +
Preference number: 5 (lower is better)
Translates to: ADVLSDELPIFTSDGSVDSCLCL*VKLSVE
Trigger: CTCCACACTCAGTTTCACCAACAGACATAAACACGA...GTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCGATGAAAGCTGGACATaGGTGGAAGACTCGTGTTTA +
Preference number: 5 (lower is better)
Translates to: SSDNLSCPSPYEERSPSIDESWT*VEDSCL
Trigger: TAAACACGAGTCTTCCACCAATGTCCAGCTTTCATC...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
CDS-3UTR CAA 90 bp GCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACGATGAAAGCTGGACATaGGTGGAAGACTCGTGTTTA +
Preference number: 5 (lower is better)
Translates to: ADVLSDELPIFTSDGSVDDESWT*VEDSCL
Trigger: TAAACACGAGTCTTCCACCAATGTCCAGCTTTCATC...GTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTTGTGAGTTTTCATAGCTaGGGGATGAAGGTGCTTGCC +
Preference number: 5 (lower is better)
Translates to: LLMEVLTSCFDRRITFEFVSFHS*GMKVLA
Trigger: GGCAAGCACCTTCATCCCCAAGCTATGAAAACTCAC...AAACTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp AAGGAATTATTAAGCCAAGATACCTCCTTTAGCATGTTTTTCTCTCCCAGGGTTAAGCTGATCGACTGCTaGCAACAAGGCTTGATCCTC +
Preference number: 5 (lower is better)
Translates to: KELLSQDTSFSMFFSPRVKLIDC*QQGLIL
Trigger: GAGGATCAAGCCTTGTTGCAAGCAGTCGATCAGCTT...AACCCTGGGAGAGAAAAACATGCTAAAGGAGGTATCTTGGCTTAATAATTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGGTGAGTGGAGAGATCCCTCTAGATGAAACCTaGATATCTTTTTGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: HLSIQFRHKATSTVSGEIPLDET*ISFWED
Trigger: ATCCTCCCAAAAAGATATCAAGGTTTCATCTAGAGG...GATCTCTCCACTCACCGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CAA 90 bp GTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCTGGAACTGCCTCTAGATGAAACCTaGATATCTTTTTGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: VLMRRGHLLSSLLITLELPLDET*ISFWED
Trigger: ATCCTCCCAAAAAGATATCAAGGTTTCATCTAGAGG...CAGTTCCAGAGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp TGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGCATCAGCTGAGTGTAGATCCTCTAGATGAAACCTaGATATCTTTTTGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: CSLHVNRFNVCWHQLSVDPLDET*ISFWED
Trigger: ATCCTCCCAAAAAGATATCAAGGTTTCATCTAGAGG...ATCTACACTCAGCTGATGCCAGCATACATTAAAGCGGTTCACGTGCAGAGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CAA 90 bp CAGGGTTGTTGTGGTGGAAGACAGGTTTCATGGAAGTTCAAAGTGATTATGTCTGATGACTGCCACGGCTaGATGAAGAATAAGGAGTTT +
Preference number: 5 (lower is better)
Translates to: QGCCGGRQVSWKFKVIMSDDCHG*MKNKEF
Trigger: AAACTCCTTATTCTTCATCAAGCCGTGGCAGTCATC...AGACATAATCACTTTGAACTTCCATGAAACCTGTCTTCCACCACAACAACCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACGATGACTGCCACGGCTaGATGAAGAATAAGGAGTTT +
Preference number: 5 (lower is better)
Translates to: ADVLSDELPIFTSDGSVDDDCHG*MKNKEF
Trigger: AAACTCCTTATTCTTCATCAAGCCGTGGCAGTCATC...GTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCGATGACTGCCACGGCTaGATGAAGAATAAGGAGTTT +
Preference number: 5 (lower is better)
Translates to: SSDNLSCPSPYEERSPSIDDCHG*MKNKEF
Trigger: AAACTCCTTATTCTTCATCAAGCCGTGGCAGTCATC...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp TGTATGCTGGCATCAGCTGAGTGTAGATCAGCTTTCCACATTAACTTTTTCCCTCTTCTGATGGAAGTGTaGACCAGTTGCTTTGATCGT +
Preference number: 5 (lower is better)
Translates to: CMLASAECRSAFHINFFPLLMEV*TSCFDR
Trigger: ACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG...AGGGAAAAAGTTAATGTGGAAAGCTGATCTACACTCAGCTGATGCCAGCATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CAA 90 bp GATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGCTTCTGATGGAAGTGTaGACCAGTTGCTTTGATCGT +
Preference number: 5 (lower is better)
Translates to: DVLSDELPIFTSDGSVDQLLMEV*TSCFDR
Trigger: ACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG...CTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCCTTCTGATGGAAGTGTaGACCAGTTGCTTTGATCGT +
Preference number: 5 (lower is better)
Translates to: SSDNLSCPSPYEERSPSILLMEV*TSCFDR
Trigger: ACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp AAGCTACATAGTGATTTGGGTCCTTTCCTCTGTGTGCTGATTGCCACTGTTGATGCAACAAAAGATTTGTaGCAAACATCTCATGGGCTG +
Preference number: 5 (lower is better)
Translates to: KLHSDLGPFLCVLIATVDATKDL*QTSHGL
Trigger: CAGCCCATGAGATGTTTGCAACAAATCTTTTGTTGC...ATCAACAGTGGCAATCAGCACACAGAGGAAAGGACCCAAATCACTATGTAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGCAACAAAAGATTTGTaGCAAACATCTCATGGGCTG +
Preference number: 5 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYATKDL*QTSHGL
Trigger: CAGCCCATGAGATGTTTGCAACAAATCTTTTGTTGC...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCGCAACAAAAGATTTGTaGCAAACATCTCATGGGCTG +
Preference number: 5 (lower is better)
Translates to: TVSDCAEATHCLQQKICCATKDL*QTSHGL
Trigger: CAGCCCATGAGATGTTTGCAACAAATCTTTTGTTGC...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp GCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACGAAGCGACACACTGCTaGCAACAAAAGATTTGTTGC +
Preference number: 5 (lower is better)
Translates to: ADVLSDELPIFTSDGSVDEATHC*QQKICC
Trigger: GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTC...GTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTGAAGCGACACACTGCTaGCAACAAAAGATTTGTTGC +
Preference number: 5 (lower is better)
Translates to: LSDELPIFTSDGSVDQLLEATHC*QQKICC
Trigger: GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTC...AAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCGAAGCGACACACTGCTaGCAACAAAAGATTTGTTGC +
Preference number: 5 (lower is better)
Translates to: SSDNLSCPSPYEERSPSIEATHC*QQKICC
Trigger: GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTC...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp TCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGATCACACTACCTGCCTaGGTGACTACTGGGTTTTGT +
Preference number: 5 (lower is better)
Translates to: SLLMEVLTSCFDRRITFEITLPA*VTTGFC
Trigger: ACAAAACCCAGTAGTCACCAAGGCAGGTAGTGTGAT...CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp TCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGCAGATGGTTTGCAGTaGATTAAATCACCCACTCAA +
Preference number: 5 (lower is better)
Translates to: SRQSLIVQKRHTACNKRFADGLQ*IKSPTQ
Trigger: TTGAGTGGGTGATTTAATCAACTGCAAACCATCTGC...AAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTGCAGATGGTTTGCAGTaGATTAAATCACCCACTCAA +
Preference number: 5 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITADGLQ*IKSPTQ
Trigger: TTGAGTGGGTGATTTAATCAACTGCAAACCATCTGC...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGGCAGATGGTTTGCAGTaGATTAAATCACCCACTCAA +
Preference number: 5 (lower is better)
Translates to: PVRFVSSDNLSCPSPYEEADGLQ*IKSPTQ
Trigger: TTGAGTGGGTGATTTAATCAACTGCAAACCATCTGC...CTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp AAGCTACATAGTGATTTGGGTCCTTTCCTCTGTGTGCTGATTGCCACTGTTGATGCAGATGGTTTGCAGTaGATTAAATCACCCACTCAA +
Preference number: 5 (lower is better)
Translates to: KLHSDLGPFLCVLIATVDADGLQ*IKSPTQ
Trigger: TTGAGTGGGTGATTTAATCAACTGCAAACCATCTGC...ATCAACAGTGGCAATCAGCACACAGAGGAAAGGACCCAAATCACTATGTAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp TCACAAATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGATCTGGCTCATCATTTaGGGACAGGGGCAGATGGTT +
Preference number: 5 (lower is better)
Translates to: SQMTDLLGIILIRVPEVLIWLII*GQGQMV
Trigger: AACCATCTGCCCCTGTCCCAAAATGATGAGCCAGAT...CAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCATTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GCTGCACGGAGGAGGCTGGACTGTGACCATAAACTGTTCAGATTTAGAGATCAATCACAAATGACTGACTaGTTAGGAATCATCCTGATT +
Preference number: 5 (lower is better)
Translates to: AARRRLDCDHKLFRFRDQSQMTD*LGIILI
Trigger: AATCAGGATGATTCCTAACAAGTCAGTCATTTGTGA...TTGATCTCTAAATCTGAACAGTTTATGGTCACAGTCCAGCCTCCTCCGTGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCAAATGCTCGTGAAGTaGCTGCTCAACTCGATTTTT +
Preference number: 5 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITQMLVK*LLNSIF
Trigger: AAAAATCGAGTTGAGCAGCAACTTCACGAGCATTTG...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333725.10
ENST00000438423.6
ENST00000543579.5
ENST00000559703.1
CDS-3UTR CAA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCGAAGGACATTGCATCTaGCAAATGCTCGTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: SSDNLSCPSPYEERSPSIEGHCI*QMLVKL
Trigger: CAACTTCACGAGCATTTGCAAGATGCAATGTCCTTC...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333725.10
ENST00000438423.6
ENST00000543579.5
ENST00000559703.1
CDS TCA 90 bp TCACAGACATCCTTTAAGAAGGACATTGCATCTTGCAAATGCTCGTaGAGTTGCTGCTCAACTCGATTTTTCTGGCAAAGTCAAGACAGA +
Preference number: 5 (lower is better)
Translates to: SQTSFKKDIASCKCS*SCCSTRFFWQSQDR
Trigger: TCTGTCTTGACTTTGCCAGAAAAATCGAGTTGAGCAGCAACTTCACGAGCATTTGCAAGATGCAATGTCCTTCTTAAAGGATGTCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561449.1
CDS-3UTR CAA 90 bp GTTAATCAGATGTTGAGCTTAGATTTGAATCGAGGACTATTTAATGCCAAAGCTCGATTAAAGTTCACTTaGGCCGGGAGAACGGGCTTG +
Preference number: 5 (lower is better)
Translates to: VNQMLSLDLNRGLFNAKARLKFT*AGRTGL
Trigger: CAAGCCCGTTCTCCCGGCCAAAGTGAACTTTAATCG...AGCTTTGGCATTAAATAGTCCTCGATTCAAATCTAAGCTCAACATCTGATTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR CAA 90 bp GTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTTGTTCCCCAAGATGTaGTACCTCCTCTTTCATCAA +
Preference number: 5 (lower is better)
Translates to: VANISWADVLSDELPIFTLFPKM*YLLFHQ
Trigger: TTGATGAAAGAGGAGGTACAACATCTTGGGGAACAA...AGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CAGGGTTGTTGTGGTGGAAGACAGGTTTCATGGAAGTTCAAAGTGATTATGTCTCTAGGAGATTCACGGTaGAAATCATCTGAATTTGGG +
Preference number: 5 (lower is better)
Translates to: QGCCGGRQVSWKFKVIMSLGDSR*KSSEFG
Trigger: CCCAAATTCAGATGATTTCAACCGTGAATCTCCTAG...AGACATAATCACTTTGAACTTCCATGAAACCTGTCTTCCACCACAACAACCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp TCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAAACATATTGTGGGTCCCATCTaGCATAAAGAAAGTGCTAGC +
Preference number: 5 (lower is better)
Translates to: SDCAEATHCLQQKICCKHIVGPI*HKESAS
Trigger: GCTAGCACTTTCTTTATGCAAGATGGGACCCACAAT...ATGTTTGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp ATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGTCTTGTCTGGTGTTGATGGATTaGACGGAAAACTACTGCTGG +
Preference number: 5 (lower is better)
Translates to: MTDLLGIILIRVPEVLSCLVLMD*TENYCW
Trigger: CCAGCAGTAGTTTTCCGTCAAATCCATCAACACCAG...ACAAGACAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGTTTCTGGTGTTGATGGATTaGACGGAAAACTACTGCTGG +
Preference number: 5 (lower is better)
Translates to: LLMEVLTSCFDRRITFEFLVLMD*TENYCW
Trigger: CCAGCAGTAGTTTTCCGTCAAATCCATCAACACCAG...AAACTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp ATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGTCTTGTGATGAGTTCCAACCATaGAAGCTGATCGACTGCTTG +
Preference number: 5 (lower is better)
Translates to: MTDLLGIILIRVPEVLSCDEFQP*KLIDCL
Trigger: CAAGCAGTCGATCAGCTTCAATGGTTGGAACTCATC...ACAAGACAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTCCTCTAGATGAAACCTaGATATCTTTTTGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITPLDET*ISFWED
Trigger: ATCCTCCCAAAAAGATATCAAGGTTTCATCTAGAGG...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CTCCCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATCCTCTAGATGAAACCTaGATATCTTTTTGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: LPPVRFVSSDNLSCPSPYPLDET*ISFWED
Trigger: ATCCTCCCAAAAAGATATCAAGGTTTCATCTAGAGG...ATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCACCTCTAGATGAAACCTaGATATCTTTTTGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: QSLIVQKRHTACNKRFVAPLDET*ISFWED
Trigger: ATCCTCCCAAAAAGATATCAAGGTTTCATCTAGAGG...TGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp ACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCATTCGGCCAAGCTCTTaGAATGCTTCATTAATATCC +
Preference number: 5 (lower is better)
Translates to: TVSDCAEATHCLQQKICCIRPSS*NASLIS
Trigger: GGATATTAATGAAGCATTCAAAGAGCTTGGCCGAAT...GCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTATTCGGCCAAGCTCTTaGAATGCTTCATTAATATCC +
Preference number: 5 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITIRPSS*NASLIS
Trigger: GGATATTAATGAAGCATTCAAAGAGCTTGGCCGAAT...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp TCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTATTCGGCCAAGCTCTTaGAATGCTTCATTAATATCC +
Preference number: 5 (lower is better)
Translates to: SRQSLIVQKRHTACNKRFIRPSS*NASLIS
Trigger: GGATATTAATGAAGCATTCAAAGAGCTTGGCCGAAT...AAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CCTCCTGTCAGGTTTGTGTCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGATTCGGCCAAGCTCTTaGAATGCTTCATTAATATCC +
Preference number: 5 (lower is better)
Translates to: PPVRFVSSDNLSCPSPYEIRPSS*NASLIS
Trigger: GGATATTAATGAAGCATTCAAAGAGCTTGGCCGAAT...CTCATAAGGACTTGGACAACTCAGATTATCTGAAGACACAAACCTGACAGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATGCAACAAAAGATTTGTaGCAAACATCTCATGGGCTG +
Preference number: 5 (lower is better)
Translates to: LMSFLSSLLMEVLTSCFDATKDL*QTSHGL
Trigger: CAGCCCATGAGATGTTTGCAACAAATCTTTTGTTGC...ATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp TTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCGCAACAAAAGATTTGTaGCAAACATCTCATGGGCTG +
Preference number: 5 (lower is better)
Translates to: FYLMSFLSSLLMEVLTSCATKDL*QTSHGL
Trigger: CAGCCCATGAGATGTTTGCAACAAATCTTTTGTTGC...GCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CAATGGTTGTCACTGCTTTGTTCTCTGCACGTGAACCGCTTTAATGTATGCTGGTCACAAATGACTGACTaGTTAGGAATCATCCTGATT +
Preference number: 5 (lower is better)
Translates to: QWLSLLCSLHVNRFNVCWSQMTD*LGIILI
Trigger: AATCAGGATGATTCCTAACAAGTCAGTCATTTGTGA...CCAGCATACATTAAAGCGGTTCACGTGCAGAGAACAAAGCAGTGACAACCATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACGTTTGTCTAGTTTGTTaGAGGTTCTTGCTTGGCATG +
Preference number: 5 (lower is better)
Translates to: ADVLSDELPIFTSDGSVDVCLVC*RFLLGM
Trigger: CATGCCAAGCAAGAACCTCAAACAAACTAGACAAAC...GTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR CAA 90 bp CTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTCAAATGCTCGTGAAGTaGCTGCTCAACTCGATTTTT +
Preference number: 5 (lower is better)
Translates to: LSDELPIFTSDGSVDQLLQMLVK*LLNSIF
Trigger: AAAAATCGAGTTGAGCAGCAACTTCACGAGCATTTG...AAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333725.10
ENST00000438423.6
ENST00000559703.1
CDS-3UTR CAA 90 bp TCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAAACATGAAGGACATTGCATCTaGCAAATGCTCGTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: SDCAEATHCLQQKICCKHEGHCI*QMLVKL
Trigger: CAACTTCACGAGCATTTGCAAGATGCAATGTCCTTC...ATGTTTGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333725.10
ENST00000438423.6
ENST00000559703.1
CDS-3UTR CAA 90 bp TCACTTCTGATGGAAGTGTTGACCAGTTGCTTTGATCGTAGGATTACATTTGAGCTAGGAGATTCACGGTaGAAATCATCTGAATTTGGG +
Preference number: 5 (lower is better)
Translates to: SLLMEVLTSCFDRRITFELGDSR*KSSEFG
Trigger: CCCAAATTCAGATGATTTCAACCGTGAATCTCCTAG...CTCAAATGTAATCCTACGATCAAAGCAACTGGTCAACACTTCCATCAGAAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp TCACAAATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGGTGATCCAACTGGTGTaGATGGATTTGACGGAAAAC +
Preference number: 5 (lower is better)
Translates to: SQMTDLLGIILIRVPEVLVIQLV*MDLTEN
Trigger: GTTTTCCGTCAAATCCATCAACACCAGTTGGATCAC...CAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCATTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACATTCGGCCAAGCTCTTaGAATGCTTCATTAATATCC +
Preference number: 5 (lower is better)
Translates to: ADVLSDELPIFTSDGSVDIRPSS*NASLIS
Trigger: GGATATTAATGAAGCATTCAAAGAGCTTGGCCGAAT...GTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp CATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGGTAGTTACAATGCATTaGTCAATTCAGTTTAGGCAC +
Preference number: 5 (lower is better)
Translates to: HGLMFYLMSFLSSLLMEVVVTMH*SIQFRH
Trigger: GTGCCTAAACTGAATTGACAAATGCATTGTAACTAC...CACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CAA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTGTAGTTACAATGCATTaGTCAATTCAGTTTAGGCAC +
Preference number: 5 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITVVTMH*SIQFRH
Trigger: GTGCCTAAACTGAATTGACAAATGCATTGTAACTAC...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CAA 90 bp TCGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTTGTAGTACTTACTGCTaGGAAAACAAAGCGATTTCT +
Preference number: 5 (lower is better)
Translates to: SRQSLIVQKRHTACNKRFCSTYC*ENKAIS
Trigger: AGAAATCGCTTTGTTTTCCAAGCAGTAAGTACTACA...AAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTAGCCTACTGATAACTTGTAGTACTTACTGCTaGGAAAACAAAGCGATTTCT +
Preference number: 5 (lower is better)
Translates to: VVQVLMRRGHLLSSLLITCSTYC*ENKAIS
Trigger: AGAAATCGCTTTGTTTTCCAAGCAGTAAGTACTACA...AGTTATCAGTAGGCTAGATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp ATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGTCTTGTGTTTGTTTGAGGTTCTaGCTTGGCATGAAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: MTDLLGIILIRVPEVLSCVCLRF*LGMKSS
Trigger: TGAGGACTTCATGCCAAGCAAGAACCTCAAACAAAC...ACAAGACAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR CAA 90 bp GTTAATCAGATGTTGAGCTTAGATTTGAATCGAGGACTATTTAATGCCAAAGCTAATCATAGGAAGGACTaGGTTGACCACTTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: VNQMLSLDLNRGLFNAKANHRKD*VDHLFP
Trigger: GGGGAACAAGTGGTCAACCAAGTCCTTCCTATGATT...AGCTTTGGCATTAAATAGTCCTCGATTCAAATCTAAGCTCAACATCTGATTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR CAA 90 bp ATGACTGACTTGTTAGGAATCATCCTGATTAGAGTACCAGAAGTTCTGTCTTGTCTAGGAGATTCACGGTaGAAATCATCTGAATTTGGG +
Preference number: 5 (lower is better)
Translates to: MTDLLGIILIRVPEVLSCLGDSR*KSSEFG
Trigger: CCCAAATTCAGATGATTTCAACCGTGAATCTCCTAG...ACAAGACAGAACTTCTGGTACTCTAATCAGGATGATTCCTAACAAGTCAGTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp TTTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCCCTCTAGATGAAACCTaGATATCTTTTTGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: FVANISWADVLSDELPIFPLDET*ISFWED
Trigger: ATCCTCCCAAAAAGATATCAAGGTTTCATCTAGAGG...GAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp TTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCACCTCTAGATGAAACCTaGATATCTTTTTGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: LLQTSHGLMFYLMSFLSSPLDET*ISFWED
Trigger: ATCCTCCCAAAAAGATATCAAGGTTTCATCTAGAGG...TGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp TTTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCATTCGGCCAAGCTCTTaGAATGCTTCATTAATATCC +
Preference number: 5 (lower is better)
Translates to: FVANISWADVLSDELPIFIRPSS*NASLIS
Trigger: GGATATTAATGAAGCATTCAAAGAGCTTGGCCGAAT...GAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
CDS-3UTR CAA 90 bp AAGGAATTATTAAGCCAAGATACCTCCTTTAGCATGTTTTTCTCTCCCAGGGTTGCAACAAAAGATTTGTaGCAAACATCTCATGGGCTG +
Preference number: 5 (lower is better)
Translates to: KELLSQDTSFSMFFSPRVATKDL*QTSHGL
Trigger: CAGCCCATGAGATGTTTGCAACAAATCTTTTGTTGC...AACCCTGGGAGAGAAAAACATGCTAAAGGAGGTATCTTGGCTTAATAATTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GCTGATGTTCTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACTGTAGTACTTACTGCTaGGAAAACAAAGCGATTTCT +
Preference number: 5 (lower is better)
Translates to: ADVLSDELPIFTSDGSVDCSTYC*ENKAIS
Trigger: AGAAATCGCTTTGTTTTCCAAGCAGTAAGTACTACA...GTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAGAACATCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp TCTTCAGATAATCTGAGTTGTCCAAGTCCTTATGAGGAGAGGTCACCTTCTATCTCACAAATGACTGACTaGTTAGGAATCATCCTGATT +
Preference number: 5 (lower is better)
Translates to: SSDNLSCPSPYEERSPSISQMTD*LGIILI
Trigger: AATCAGGATGATTCCTAACAAGTCAGTCATTTGTGA...GATAGAAGGTGACCTCTCCTCATAAGGACTTGGACAACTCAGATTATCTGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp CTATCTGATGAGCTTCCTATCTTCACTTCTGATGGAAGTGTTGACCAGTTGCTTAAAAGTTTGTCTAGTTaGTTTGAGGTTCTTGCTTGG +
Preference number: 5 (lower is better)
Translates to: LSDELPIFTSDGSVDQLLKSLSS*FEVLAW
Trigger: CCAAGCAAGAACCTCAAACAAACTAGACAAACTTTT...AAGCAACTGGTCAACACTTCCATCAGAAGTGAAGATAGGAAGCTCATCAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR CAA 90 bp TCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAAACATGTAGTTACAATGCATTaGTCAATTCAGTTTAGGCAC +
Preference number: 5 (lower is better)
Translates to: SDCAEATHCLQQKICCKHVVTMH*SIQFRH
Trigger: GTGCCTAAACTGAATTGACAAATGCATTGTAACTAC...ATGTTTGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
ENST00000559703.1
CDS-3UTR CAA 90 bp TTGTTGCAAACATCTCATGGGCTGATGTTCTATCTGATGAGCTTCCTATCTTCATCACAAATGACTGACTaGTTAGGAATCATCCTGATT +
Preference number: 5 (lower is better)
Translates to: LLQTSHGLMFYLMSFLSSSQMTD*LGIILI
Trigger: AATCAGGATGATTCCTAACAAGTCAGTCATTTGTGA...TGAAGATAGGAAGCTCATCAGATAGAACATCAGCCCATGAGATGTTTGCAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp TCTGATTGTGCAGAAGCGACACACTGCTTGCAACAAAAGATTTGTTGCAAACATTCACAAATGACTGACTaGTTAGGAATCATCCTGATT +
Preference number: 5 (lower is better)
Translates to: SDCAEATHCLQQKICCKHSQMTD*LGIILI
Trigger: AATCAGGATGATTCCTAACAAGTCAGTCATTTGTGA...ATGTTTGCAACAAATCTTTTGTTGCAAGCAGTGTGTCGCTTCTGCACAATCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp GTTAATCAGATGTTGAGCTTAGATTTGAATCGAGGACTATTTAATGCCAAAGCTGTTTGTTTGAGGTTCTaGCTTGGCATGAAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: VNQMLSLDLNRGLFNAKAVCLRF*LGMKSS
Trigger: TGAGGACTTCATGCCAAGCAAGAACCTCAAACAAAC...AGCTTTGGCATTAAATAGTCCTCGATTCAAATCTAAGCTCAACATCTGATTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267811.9
ENST00000333725.10
CDS-3UTR CAA 90 bp TGGGATTCATTCTTCCAGACAATACGTGTAAGTTTACTTGACTGTGGAATGCCACCCTTTGGTTTTATTTaGCTCTTTTGTAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: WDSFFQTIRVSLLDCGMPPFGFI*LFCRKM
Trigger: CATCTTCCTACAAAAGAGCAAAATAAAACCAAAGGG...TGGCATTCCACAGTCAAGTAAACTTACACGTATTGTCTGGAAGAATGAATCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560948.1
CDS-3UTR CAA 90 bp GATTCATTCTTCCAGACAATACGTGTAAGTTTACTTGACTGTGGAATGCCAAGGAGCAACTTTATGGGATaGTATCCAGATTACATAAGC +
Preference number: 5 (lower is better)
Translates to: DSFFQTIRVSLLDCGMPRSNFMG*YPDYIS
Trigger: GCTTATGTAATCTGGATACAATCCCATAAAGTTGCT...CCTTGGCATTCCACAGTCAAGTAAACTTACACGTATTGTCTGGAAGAATGAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560948.1
CDS TCA 90 bp CACATAGAAGAAACAATGTGCTCACATAAAACCTCAGCATTGAACTaGGCCTCCAGATTTATACTTCTAAGTGACCATCTTGTGTTTTCT +
Preference number: 5 (lower is better)
Translates to: HIEETMCSHKTSALN*ASRFILLSDHLVFS
Trigger: AGAAAACACAAGATGGTCACTTAGAAGTATAAATCTGGAGGCTCAGTTCAATGCTGAGGTTTTATGTGAGCACATTGTTTCTTCTATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560191.1
CDS-3UTR CAA 90 bp AAGGAATTATTAAGCCAAGATACCTCCTTTAGCATGTTTTTCTCTCCCAGGGTTGTAGTTACAATGCATTaGTCAATTCAGTTTAGGCAC +
Preference number: 5 (lower is better)
Translates to: KELLSQDTSFSMFFSPRVVVTMH*SIQFRH
Trigger: GTGCCTAAACTGAATTGACAAATGCATTGTAACTAC...AACCCTGGGAGAGAAAAACATGCTAAAGGAGGTATCTTGGCTTAATAATTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS-3UTR CAA 90 bp AAGGAATTATTAAGCCAAGATACCTCCTTTAGCATGTTTTTCTCTCCCAGGGTTTGTAGTACTTACTGCTaGGAAAACAAAGCGATTTCT +
Preference number: 5 (lower is better)
Translates to: KELLSQDTSFSMFFSPRVCSTYC*ENKAIS
Trigger: AGAAATCGCTTTGTTTTCCAAGCAGTAAGTACTACA...AACCCTGGGAGAGAAAAACATGCTAAAGGAGGTATCTTGGCTTAATAATTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000557843.5
CDS GCA 72 bp GCTTCCCCTTGCACCGCCCAGCGGCTCGGTTCACTTTaGCCCGCACGAGCTCTCGGGTCTGGGAGGGGGAGG +
Preference number: 6 (lower is better)
Translates to: ASPCTAQRLGSL*PARALGSGRGR
Trigger: CCTCCCCCTCCCAGACCCGAGAGCTCGTGCGGGGCAAAGTGAACCGAGCCGCTGGGCGGTGCAAGGGGAAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000558908.5
ENST00000559609.5
ENST00000560190.5
CDS GCA 72 bp TCACTTTGGCCGGGAGAACGGGCTTGGGCTTCCCCTTaGACCGCCCAGCGGCTCGGTTCACTTTGCCCCGCA +
Preference number: 6 (lower is better)
Translates to: SLWPGERAWASP*TAQRLGSLCPA
Trigger: TGCGGGGCAAAGTGAACCGAGCCGCTGGGCGGTGCAAGGGGAAGCCCAAGCCCGTTCTCCCGGCCAAAGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000558908.5
ENST00000559609.5
ENST00000560190.5
CDS CAA 72 bp TTCACTTTGGCCGGGAGAACGGGCTTGGGCTTCCCCTaGCACCGCCCAGCGGCTCGGTTCACTTTGCCCCGC +
Preference number: 6 (lower is better)
Translates to: FTLAGRTGLGFP*HRPAARFTLPR
Trigger: GCGGGGCAAAGTGAACCGAGCCGCTGGGCGGTGCAAGGGGAAGCCCAAGCCCGTTCTCCCGGCCAAAGTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000558908.5
ENST00000559609.5
ENST00000560190.5
CDS CAA 72 bp CCCCGATTAAAGTTCACTTTGGCCGGGAGAACGGGCTaGGGCTTCCCCTTGCACCGCCCAGCGGCTCGGTTC +
Preference number: 6 (lower is better)
Translates to: PRLKFTLAGRTG*GFPLHRPAARF
Trigger: GAACCGAGCCGCTGGGCGGTGCAAGGGGAAGCCCAAGCCCGTTCTCCCGGCCAAAGTGAACTTTAATCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000558908.5
ENST00000559609.5
ENST00000560190.5
CDS CAA 90 bp CGATTAAAGTTCACTTTGGCCGGGAGAACGGGCTTGGGCTTCCCCTaGCACCGCCCAGCGGCTCGGTTCACTTTGCCCCGCACGAGCTCT +
Preference number: 6 (lower is better)
Translates to: RLKFTLAGRTGLGFP*HRPAARFTLPRTSS
Trigger: AGAGCTCGTGCGGGGCAAAGTGAACCGAGCCGCTGGGCGGTGCAAGGGGAAGCCCAAGCCCGTTCTCCCGGCCAAAGTGAACTTTAATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000558908.5
ENST00000559609.5
ENST00000560190.5
CDS CAA 90 bp ATCCAACCACCCCGATTAAAGTTCACTTTGGCCGGGAGAACGGGCTaGGGCTTCCCCTTGCACCGCCCAGCGGCTCGGTTCACTTTGCCC +
Preference number: 6 (lower is better)
Translates to: IQPPRLKFTLAGRTG*GFPLHRPAARFTLP
Trigger: GGGCAAAGTGAACCGAGCCGCTGGGCGGTGCAAGGGGAAGCCCAAGCCCGTTCTCCCGGCCAAAGTGAACTTTAATCGGGGTGGTTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000558908.5
ENST00000559609.5
ENST00000560190.5
CDS GCA 72 bp AGCTCCTTGTCGGTCCCTATAGCGGCCATGCGTTGTTaGTGGGGATTCATCTTCGGCCACTTCTGCCGCCCC +
Preference number: 6 (lower is better)
Translates to: SSLSVPIAAMRC*WGFIFGHFCRP
Trigger: GGGGCGGCAGAAGTGGCCGAAGATGAATCCCCAGCAACAACGCATGGCCGCTATAGGGACCGACAAGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438423.6
ENST00000557843.5
CDS CCA 72 bp TCCTTGTCGGTCCCTATAGCGGCCATGCGTTGTTGCTaGGGATTCATCTTCGGCCACTTCTGCCGCCCCGTC +
Preference number: 6 (lower is better)
Translates to: SLSVPIAAMRCC*GFIFGHFCRPV
Trigger: GACGGGGCGGCAGAAGTGGCCGAAGATGAATCCCCAGCAACAACGCATGGCCGCTATAGGGACCGACAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438423.6
ENST00000557843.5
CDS CAA 72 bp CAGCTCCTTGTCGGTCCCTATAGCGGCCATGCGTTGTaGCTGGGGATTCATCTTCGGCCACTTCTGCCGCCC +
Preference number: 6 (lower is better)
Translates to: QLLVGPYSGHAL*LGIHLRPLLPP
Trigger: GGGCGGCAGAAGTGGCCGAAGATGAATCCCCAGCAACAACGCATGGCCGCTATAGGGACCGACAAGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438423.6
ENST00000557843.5
CDS CAA 72 bp CGTCTCCGCATCCAACCACCCCGATTAAAGTTCACTTaGGCCGGGAGAACGGGCTTGGGCTTCCCCTTGCAC +
Preference number: 6 (lower is better)
Translates to: RLRIQPPRLKFT*AGRTGLGFPLH
Trigger: GTGCAAGGGGAAGCCCAAGCCCGTTCTCCCGGCCAAAGTGAACTTTAATCGGGGTGGTTGGATGCGGAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000438423.6
ENST00000558908.5
ENST00000559609.5
ENST00000560190.5
CDS CAA 72 bp GCTCAGCTCCTTGTCGGTCCCTATAGCGGCCATGCGTaGTTGCTGGGGATTCATCTTCGGCCACTTCTGCCG +
Preference number: 6 (lower is better)
Translates to: AQLLVGPYSGHA*LLGIHLRPLLP
Trigger: CGGCAGAAGTGGCCGAAGATGAATCCCCAGCAACAACGCATGGCCGCTATAGGGACCGACAAGGAGCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438423.6
ENST00000557843.5
CDS CCA 72 bp AGGGTTGGTAGTTTCACTAAGCCCAGGATGGGTTCCTaGCAGTGTGGTTGGCGGCTCTGCCGATACGGCAGA +
Preference number: 6 (lower is better)
Translates to: RVGSFTKPRMGS*QCGWRLCRYGR
Trigger: TCTGCCGTATCGGCAGAGCCGCCAACCACACTGCCAGGAACCCATCCTGGGCTTAGTGAAACTACCAACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
ENST00000560190.5
ENST00000560191.1
ENST00000560836.1
ENST00000560948.1
ENST00000561454.1
CDS CAA 72 bp CAGCTCCTTGTCGGTCCCTATAGCGGCCATGCGTTGTaGCTGGGGATTCATCTTCGGCCACTTCTAGCAGGT +
Preference number: 6 (lower is better)
Translates to: QLLVGPYSGHAL*LGIHLRPLLAG
Trigger: ACCTGCTAGAAGTGGCCGAAGATGAATCCCCAGCAACAACGCATGGCCGCTATAGGGACCGACAAGGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000557947.5
ENST00000558908.5
ENST00000559609.5
ENST00000560190.5
ENST00000561152.1
CDS CAA 72 bp GCTCAGCTCCTTGTCGGTCCCTATAGCGGCCATGCGTaGTTGCTGGGGATTCATCTTCGGCCACTTCTAGCA +
Preference number: 6 (lower is better)
Translates to: AQLLVGPYSGHA*LLGIHLRPLLA
Trigger: TGCTAGAAGTGGCCGAAGATGAATCCCCAGCAACAACGCATGGCCGCTATAGGGACCGACAAGGAGCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000557947.5
ENST00000558908.5
ENST00000559609.5
ENST00000560190.5
ENST00000561152.1
CDS CAA 90 bp GATCCTCCATTCGAGACTGCAGGGAGTGGAGTGAGTTTTCATAGCTaGGGGATGAAGGTGCTTGCCCTCCAGGTCTTGGCCACTGACTGG +
Preference number: 6 (lower is better)
Translates to: DPPFETAGSGVSFHS*GMKVLALQVLATDW
Trigger: CCAGTCAGTGGCCAAGACCTGGAGGGCAAGCACCTTCATCCCCAAGCTATGAAAACTCACTCCACTCCCTGCAGTCTCGAATGGAGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000343827.7
ENST00000537840.5
ENST00000557843.5
ENST00000559710.5
ENST00000560506.5
ENST00000560764.5
CDS GCA 72 bp TGGGAGGAGTGTGTGAGGCAGCAACGTAAGGTGAACTaGTGGTACTGCCGCGATGAAAGCTGGACATTGGTG +
Preference number: 6 (lower is better)
Translates to: WEECVRQQRKVN*WYCRDESWTLV
Trigger: CACCAATGTCCAGCTTTCATCGCGGCAGTACCAGCAGTTCACCTTACGTTGCTGCCTCACACACTCCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559609.5
ENST00000560764.5
ENST00000561235.5
ENST00000561346.5
CDS GCA 72 bp CCCAGGATGGGTTCCTGGCAGTGTGGTTGGCGGCTCTaGCGATACGGCAGAAACTTTTTCTTCTTCCCTTCT +
Preference number: 6 (lower is better)
Translates to: PRMGSWQCGWRL*RYGRNFFFFPS
Trigger: AGAAGGGAAGAAGAAAAAGTTTCTGCCGTATCGGCAGAGCCGCCAACCACACTGCCAGGAACCCATCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559703.1
ENST00000559710.5
ENST00000560190.5
ENST00000560191.1
ENST00000560836.1
ENST00000560948.1
ENST00000561454.1
CDS CAA 72 bp TTCGAGACTGCAGGGAGTGGAGTGAGTTTTCATAGCTaGGGGATGAAGGTGCTTGCCCTCCAGGTCTTGGCC +
Preference number: 6 (lower is better)
Translates to: FETAGSGVSFHS*GMKVLALQVLA
Trigger: GGCCAAGACCTGGAGGGCAAGCACCTTCATCCCCAAGCTATGAAAACTCACTCCACTCCCTGCAGTCTCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267811.9
ENST00000343827.7
ENST00000537840.5
ENST00000557843.5
ENST00000559710.5
ENST00000560506.5
ENST00000560764.5
CDS GCA 72 bp TGTGTGAGGCAGCAACGTAAGGTGAACTGCTGGTACTaGCGCGATGAAAGCTGGACATTGGTGGAAGACTCG +
Preference number: 6 (lower is better)
Translates to: CVRQQRKVNCWY*RDESWTLVEDS
Trigger: CGAGTCTTCCACCAATGTCCAGCTTTCATCGCGGCAGTACCAGCAGTTCACCTTACGTTGCTGCCTCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559609.5
ENST00000560764.5
ENST00000561235.5
ENST00000561346.5
CDS CCA 72 bp GAGGAGTGTGTGAGGCAGCAACGTAAGGTGAACTGCTaGTACTGCCGCGATGAAAGCTGGACATTGGTGGAA +
Preference number: 6 (lower is better)
Translates to: EECVRQQRKVNC*YCRDESWTLVE
Trigger: TTCCACCAATGTCCAGCTTTCATCGCGGCAGTACCAGCAGTTCACCTTACGTTGCTGCCTCACACACTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559609.5
ENST00000560764.5
ENST00000561235.5
ENST00000561346.5
CDS CCA 72 bp GGTTGCCATAACTACTGGATTGAGACATGTGGGAAGTaGAGGTCCCCAGAATTCCACCAAAACCAGGCTGGC +
Preference number: 6 (lower is better)
Translates to: GCHNYWIETCGK*RSPEFHQNQAG
Trigger: GCCAGCCTGGTTTTGGTGGAATTCTGGGGACCTCCACTTCCCACATGTCTCAATCCAGTAGTTATGGCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000543579.5
ENST00000557843.5
ENST00000559609.5
ENST00000561235.5
ENST00000561346.5
CDS TCA 72 bp CATTCCCTCTGGTTCCTAGAATGCTGTCTGATCCATTaGTGGGAGGAGTGTGTGAGGCAGCAACGTAAGGTG +
Preference number: 6 (lower is better)
Translates to: HSLWFLECCLIH*WEECVRQQRKV
Trigger: CACCTTACGTTGCTGCCTCACACACTCCTCCCATCAATGGATCAGACAGCATTCTAGGAACCAGAGGGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559609.5
ENST00000560764.5
ENST00000561235.5
ENST00000561346.5
CDS CAA 90 bp TGGAGGTCCCCAGAATTCCACCAAAACCAGGCTGGCTCATCCCATTaGATGAACTCCAAAGGTCAGAAGAATTGTGGGTCCCATCTTGCA +
Preference number: 6 (lower is better)
Translates to: WRSPEFHQNQAGSSH*MNSKGQKNCGSHLA
Trigger: TGCAAGATGGGACCCACAATTCTTCTGACCTTTGGAGTTCATCAAATGGGATGAGCCAGCCTGGTTTTGGTGGAATTCTGGGGACCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000543579.5
ENST00000557843.5
ENST00000559609.5
ENST00000561235.5
ENST00000561346.5
CDS CCA 72 bp GAAGTGGAGGTCCCCAGAATTCCACCAAAACCAGGCTaGCTCATCCCATTTGATGAACTCCAAAGGTCAGAA +
Preference number: 6 (lower is better)
Translates to: EVEVPRIPPKPG*LIPFDELQRSE
Trigger: TTCTGACCTTTGGAGTTCATCAAATGGGATGAGCCAGCCTGGTTTTGGTGGAATTCTGGGGACCTCCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000543579.5
ENST00000557843.5
ENST00000559609.5
ENST00000561235.5
ENST00000561346.5
CDS CCA 72 bp CGTAAGGTGAACTGCTGGTACTGCCGCGATGAAAGCTaGACATTGGTGGAAGACTCGTGTTTATGTCTGTTG +
Preference number: 6 (lower is better)
Translates to: RKVNCWYCRDES*TLVEDSCLCLL
Trigger: CAACAGACATAAACACGAGTCTTCCACCAATGTCCAGCTTTCATCGCGGCAGTACCAGCAGTTCACCTTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559609.5
ENST00000560764.5
ENST00000561235.5
ENST00000561346.5
CDS CAA 90 bp CAACGTAAGGTGAACTGCTGGTACTGCCGCGATGAAAGCTGGACATaGGTGGAAGACTCGTGTTTATGTCTGTTGGTGAAACTGAGTGTG +
Preference number: 6 (lower is better)
Translates to: QRKVNCWYCRDESWT*VEDSCLCLLVKLSV
Trigger: CACACTCAGTTTCACCAACAGACATAAACACGAGTCTTCCACCAATGTCCAGCTTTCATCGCGGCAGTACCAGCAGTTCACCTTACGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559609.5
ENST00000560764.5
ENST00000561235.5
ENST00000561346.5
CDS TCA 72 bp GGGTTAAGGTTCCTCTCATTAAGTCAGTGGGAGCCCTaGGCCTGTTTTCATGAAACTAGATGGTCCCATCTG +
Preference number: 6 (lower is better)
Translates to: GLRFLSLSQWEP*ACFHETRWSHL
Trigger: CAGATGGGACCATCTAGTTTCATGAAAACAGGCTCAGGGCTCCCACTGACTTAATGAGAGGAACCTTAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561454.1
CDS TCA 72 bp GGTGCACCTGAGGTCTCCCTTCAAAGACAACCTGGCTaGTGTTTACATATGACCCATAGGGTTGGTAGTTTC +
Preference number: 6 (lower is better)
Translates to: GAPEVSLQRQPG*CLHMTHRVGSF
Trigger: GAAACTACCAACCCTATGGGTCATATGTAAACATCAGCCAGGTTGTCTTTGAAGGGAGACCTCAGGTGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560948.1
CDS CCA 72 bp TCAAGCGGTCATGTGAATGAAGGTTGCCATAACTACTaGATTGAGACATGTGGGAAGTGGAGGTCCCCAGAA +
Preference number: 6 (lower is better)
Translates to: SSGHVNEGCHNY*IETCGKWRSPE
Trigger: TTCTGGGGACCTCCACTTCCCACATGTCTCAATCCAGTAGTTATGGCAACCTTCATTCACATGACCGCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000543579.5
ENST00000557843.5
ENST00000559609.5
ENST00000561235.5
ENST00000561346.5
CDS CAA 72 bp CCAGAATTCCACCAAAACCAGGCTGGCTCATCCCATTaGATGAACTCCAAAGGTCAGAAGAATTGTGGGTCC +
Preference number: 6 (lower is better)
Translates to: PEFHQNQAGSSH*MNSKGQKNCGS
Trigger: GGACCCACAATTCTTCTGACCTTTGGAGTTCATCAAATGGGATGAGCCAGCCTGGTTTTGGTGGAATTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000543579.5
ENST00000557843.5
ENST00000559609.5
ENST00000561235.5
ENST00000561346.5
CDS CAA 72 bp GTGAACTGCTGGTACTGCCGCGATGAAAGCTGGACATaGGTGGAAGACTCGTGTTTATGTCTGTTGGTGAAA +
Preference number: 6 (lower is better)
Translates to: VNCWYCRDESWT*VEDSCLCLLVK
Trigger: TTTCACCAACAGACATAAACACGAGTCTTCCACCAATGTCCAGCTTTCATCGCGGCAGTACCAGCAGTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559609.5
ENST00000560764.5
ENST00000561235.5
ENST00000561346.5
CDS CAA 90 bp CGCGATGAAAGCTGGACATTGGTGGAAGACTCGTGTTTATGTCTGTaGGTGAAACTGAGTGTGGAGGATAACTCAAGCGGTCATGTGAAT +
Preference number: 6 (lower is better)
Translates to: RDESWTLVEDSCLCL*VKLSVEDNSSGHVN
Trigger: ATTCACATGACCGCTTGAGTTATCCTCCACACTCAGTTTCACCAACAGACATAAACACGAGTCTTCCACCAATGTCCAGCTTTCATCGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000543579.5
ENST00000557843.5
ENST00000559609.5
ENST00000561235.5
ENST00000561346.5
CDS TCA 72 bp TTATGGGATGGTCCCAATAAACTATGTATATCACTGTaGCCAGCAGGCAAACTGGTGGAAGGTCCCACAGCA +
Preference number: 6 (lower is better)
Translates to: LWDGPNKLCISL*PAGKLVEGPTA
Trigger: TGCTGTGGGACCTTCCACCAGTTTGCCTGCTGGTCACAGTGATATACATAGTTTATTGGGACCATCCCATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000558210.5
ENST00000559609.5
ENST00000559703.1
ENST00000559710.5
ENST00000560506.5
ENST00000560764.5
ENST00000561420.5
ENST00000561449.1
CDS GCA 72 bp GTGGAGGATAACTCAAGCGGTCATGTGAATGAAGGTTaGCATAACTACTGGATTGAGACATGTGGGAAGTGG +
Preference number: 6 (lower is better)
Translates to: VEDNSSGHVNEG*HNYWIETCGKW
Trigger: CCACTTCCCACATGTCTCAATCCAGTAGTTATGGCAACCTTCATTCACATGACCGCTTGAGTTATCCTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000543579.5
ENST00000557843.5
ENST00000559609.5
ENST00000561235.5
ENST00000561346.5
CDS CAA 72 bp AGCTGGACATTGGTGGAAGACTCGTGTTTATGTCTGTaGGTGAAACTGAGTGTGGAGGATAACTCAAGCGGT +
Preference number: 6 (lower is better)
Translates to: SWTLVEDSCLCL*VKLSVEDNSSG
Trigger: ACCGCTTGAGTTATCCTCCACACTCAGTTTCACCAACAGACATAAACACGAGTCTTCCACCAATGTCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000543579.5
ENST00000557843.5
ENST00000559609.5
ENST00000561235.5
ENST00000561346.5
CDS TCA 72 bp TGCTTGCAACAAGGCTTGATCCTCCATAGTTTGAATTaGGGCTTCCAATTGGTGCATTATGGGATGGTCCCA +
Preference number: 6 (lower is better)
Translates to: CLQQGLILHSLN*GFQLVHYGMVP
Trigger: TGGGACCATCCCATAATGCACCAATTGGAAGCCTCAATTCAAACTATGGAGGATCAAGCCTTGTTGCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000558210.5
ENST00000559609.5
ENST00000559703.1
ENST00000559710.5
ENST00000560506.5
ENST00000560764.5
ENST00000561420.5
ENST00000561449.1
CDS TCA 72 bp CCTGTTTTCATGAAACTAGATGGTCCCATCTGGGGGTaGTGGGACAGAATGACACATCAGGCATTAGATTCT +
Preference number: 6 (lower is better)
Translates to: PVFMKLDGPIWG*WDRMTHQALDS
Trigger: AGAATCTAATGCCTGATGTGTCATTCTGTCCCATCACCCCCAGATGGGACCATCTAGTTTCATGAAAACAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561454.1
CDS CAA 90 bp CGCGATGAAAGCTGGACATTGGTGGAAGACTCGTGTTTATGTCTGTaGGTGAAACTGAGTGTGGAGGATAACTCTTGCATAAAGAAAGTG +
Preference number: 6 (lower is better)
Translates to: RDESWTLVEDSCLCL*VKLSVEDNSCIKKV
Trigger: CACTTTCTTTATGCAAGAGTTATCCTCCACACTCAGTTTCACCAACAGACATAAACACGAGTCTTCCACCAATGTCCAGCTTTCATCGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537840.5
ENST00000560764.5
CDS TCA 72 bp TCCTTTAAGAAGGACATTGCATCTTGCAAATGCTCGTaGAGTTGCTGCTCAACTCGATTTTTCAGGGAGTGG +
Preference number: 6 (lower is better)
Translates to: SFKKDIASCKCS*SCCSTRFFREW
Trigger: CCACTCCCTGAAAAATCGAGTTGAGCAGCAACTTCACGAGCATTTGCAAGATGCAATGTCCTTCTTAAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333725.10
ENST00000438423.6
ENST00000543579.5
ENST00000558210.5
ENST00000559609.5
ENST00000559703.1
ENST00000561420.5
CDS TCA 72 bp AGAGAATTACCAACTTACCCATCAGATTTGAGTTCATaGAAGGTGTTGGGGACAAGCCTTCATGGGCTCCTA +
Preference number: 6 (lower is better)
Translates to: RELPTYPSDLSS*KVLGTSLHGLL
Trigger: TAGGAGCCCATGAAGGCTTGTCCCCAACACCTTTCATGAACTCAAATCTGATGGGTAAGTTGGTAATTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569880.1
CDS CAA 72 bp AGCTGGACATTGGTGGAAGACTCGTGTTTATGTCTGTaGGTGAAACTGAGTGTGGAGGATAACTCTTGCATA +
Preference number: 6 (lower is better)
Translates to: SWTLVEDSCLCL*VKLSVEDNSCI
Trigger: TATGCAAGAGTTATCCTCCACACTCAGTTTCACCAACAGACATAAACACGAGTCTTCCACCAATGTCCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537840.5
ENST00000560764.5
CDS TCA 72 bp CTGGTATTCAAATCTGTGAAACCTGATCCACTGAATTaGCTGCTTCCCAGTGTAGTTGGTCTAGTTTTCCCA +
Preference number: 6 (lower is better)
Translates to: LVFKSVKPDPLN*LLPSVVGLVFP
Trigger: TGGGAAAACTAGACCAACTACACTGGGAAGCAGTCAATTCAGTGGATCAGGTTTCACAGATTTGAATACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558908.5
CDS TCA 72 bp ATCCTCATCTTCATTAGTACTGCTGATCCACTGAATTaGCTGCTTCCCAGTGTAGTTGGTCTAGTTTTCCCA +
Preference number: 6 (lower is better)
Translates to: ILIFISTADPLN*LLPSVVGLVFP
Trigger: TGGGAAAACTAGACCAACTACACTGGGAAGCAGTCAATTCAGTGGATCAGCAGTACTAATGAAGATGAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560190.5
CDS TCA 72 bp TCCTTTAAGAAGGACATTGCATCTTGCAAATGCTCGTaGAGTTGCTGCTCAACTCGATTTTTCTGGCAAAGT +
Preference number: 6 (lower is better)
Translates to: SFKKDIASCKCS*SCCSTRFFWQS
Trigger: ACTTTGCCAGAAAAATCGAGTTGAGCAGCAACTTCACGAGCATTTGCAAGATGCAATGTCCTTCTTAAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561449.1
CDS GCA 72 bp ATGCATTCACACATGGATCTACTCAAAAGGAACTTATaGAAAATAGGACTGAACCAACTCACAGAGCACAGA +
Preference number: 6 (lower is better)
Translates to: MHSHMDLLKRNL*KIGLNQLTEHR
Trigger: TCTGTGCTCTGTGAGTTGGTTCAGTCCTATTTTGCATAAGTTCCTTTTGAGTAGATCCATGTGTGAATGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560764.5
CDS GCA 72 bp ATCCACACAGGCAAAGGGAGTAAGTCTTCAGTACTATaGATTCACACATGGATCTACTCAAAAGGAACTTAT +
Preference number: 6 (lower is better)
Translates to: IHTGKGSKSSVL*IHTWIYSKGTY
Trigger: ATAAGTTCCTTTTGAGTAGATCCATGTGTGAATGCATAGTACTGAAGACTTACTCCCTTTGCCTGTGTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560764.5
CDS CAA 90 bp TCCTCATCTTCATTAGTACTGCTTGTTCTGCCTCTAGATGAAACCTaGATATCTTTTTGGGAGGATTCATCATCTGACTTCATGTCATCT +
Preference number: 6 (lower is better)
Translates to: SSSSLVLLVLPLDET*ISFWEDSSSDFMSS
Trigger: AGATGACATGAAGTCAGATGATGAATCCTCCCAAAAAGATATCAAGGTTTCATCTAGAGGCAGAACAAGCAGTACTAATGAAGATGAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000267811.9
ENST00000333725.10
ENST00000343827.7
ENST00000438423.6
ENST00000537840.5
ENST00000543579.5
ENST00000557843.5
ENST00000559609.5
ENST00000559710.5
ENST00000561449.1
CDS CAA 90 bp AAATCCTCATCTTCATTAGTACTTGTTCTGCCTCTAGATGAAACCTaGATATCTTTTTGGGAGGATTCATCATCTGACTTCATGTCATCT +
Preference number: 6 (lower is better)
Translates to: KSSSSLVLVLPLDET*ISFWEDSSSDFMSS
Trigger: AGATGACATGAAGTCAGATGATGAATCCTCCCAAAAAGATATCAAGGTTTCATCTAGAGGCAGAACAAGTACTAATGAAGATGAGGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559703.1
ENST00000561420.5