RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TCERG1L (Homo sapiens)

Ensembl gene IDs: ENSG00000176769

Ensembl transcript IDs: ENST00000368642.4, ENST00000483040.1

Found 206 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCTCTGAGAACGAAGACCCCGCAGTGCCGGTGCCCGCTGGGCCGTaGAGGTCTCGGCCGCCCCACGCCCGTGTCCGTCTCCACCGTGAC +
Preference number: 1 (lower is better)
Translates to: SSENEDPAVPVPAGP*RSRPPHARVRLHRD
Trigger: GTCACGGTGGAGACGGACACGGGCGTGGGGCGGCCGAGACCTGCACGGCCCAGCGGGCACCGGCACTGCGGGGTCTTCGTTCTCAGAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
3UTR CCA 90 bp GCTCCAGGCCGGGACGCCCCTCTGGGAGGAACGCGCGGCCACCCTTaGAAACCTGTAAGTGATCCACGGTCCAGGTGTGGAATGCTCACA +
Preference number: 1 (lower is better)
Translates to: APGRDAPLGGTRGHP*KPVSDPRSRCGMLT
Trigger: TGTGAGCATTCCACACCTGGACCGTGGATCACTTACAGGTTTCCAAGGGTGGCCGCGCGTTCCTCCCAGAGGGGCGTCCCGGCCTGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
3UTR GCA 90 bp AATAATTCTTTTGAAGTAGGACCGGTGGCAACCAACACGGCTCCCTaGTCCAGGCCGGGACGCCCCTCTGGGAGGAACGCGCGGCCACCC +
Preference number: 1 (lower is better)
Translates to: NNSFEVGPVATNTAP*SRPGRPSGRNARPP
Trigger: GGGTGGCCGCGCGTTCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCCACCGGTCCTACTTCAAAAGAATTATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
3UTR TCA 90 bp CTGAATGTACAAAAGAGAGAGCTTCAATATGAAACAGTAATCCTCTaGGAACGAAGACCCCGCAGTGCCGGTGCCCGCTGGGCCGTGCAG +
Preference number: 1 (lower is better)
Translates to: LNVQKRELQYETVIL*ERRPRSAGARWAVQ
Trigger: CTGCACGGCCCAGCGGGCACCGGCACTGCGGGGTCTTCGTTCTCAGAGGATTACTGTTTCATATTGAAGCTCTCTCTTTTGTACATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
3UTR TCA 90 bp AGAAATGCATCAAACTCTGAATGTACAAAAGAGAGAGCTTCAATATaGAACAGTAATCCTCTGAGAACGAAGACCCCGCAGTGCCGGTGC +
Preference number: 1 (lower is better)
Translates to: RNASNSECTKERASI*NSNPLRTKTPQCRC
Trigger: GCACCGGCACTGCGGGGTCTTCGTTCTCAGAGGATTACTGTTTCATATTGAAGCTCTCTCTTTTGTACATTCAGAGTTTGATGCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
3UTR-3UTR TCA 90 bp CCGGTGGCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGTGTCCGTCTCCACCGTaGCCCCCTCGCCCCCGGCAC +
Preference number: 2 (lower is better)
Translates to: PVATNTAPCSRPGRPSGRCPSPP*PPRPRH
Trigger: GTGCCGGGGGCGAGGGGGTCACGGTGGAGACGGACA...CCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCCACCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368642.4
3UTR-3UTR GCA 90 bp GCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAACGCGACGAAGACCCCGCAGTaGCGGTGCCCGCTGGGCCGT +
Preference number: 2 (lower is better)
Translates to: ATNTAPCSRPGRPSGRNATKTPQ*RCPLGR
Trigger: ACGGCCCAGCGGGCACCGGCACTGCGGGGTCTTCGT...CGCGTTCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
3UTR-3UTR CCA 90 bp CCGGTGGCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGACGCGCGGCCACCCTTaGAAACCTGTAAGTGATCCA +
Preference number: 2 (lower is better)
Translates to: PVATNTAPCSRPGRPSGRTRGHP*KPVSDP
Trigger: TGGATCACTTACAGGTTTCCAAGGGTGGCCGCGCGT...CCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCCACCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
3UTR-3UTR CCA 90 bp TGGCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAACGACACTGCGGGAATCCTaGAGAAACGAAGTAATTCAC +
Preference number: 2 (lower is better)
Translates to: WQPTRLPAPGRDAPLGGTTLRES*RNEVIH
Trigger: GTGAATTACTTCGTTTCTCCAGGATTCCCGCAGTGT...CGTTCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
3UTR-3UTR CCA 90 bp GCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAACGCGCCCACAGTCCTGCAGTaGATTGATAATTTGTGTATA +
Preference number: 2 (lower is better)
Translates to: ATNTAPCSRPGRPSGRNAPTVLQ*IDNLCI
Trigger: TATACACAAATTATCAATCCACTGCAGGACTGTGGG...CGCGTTCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
3UTR-3UTR GCA 90 bp AACACTGCGGGAATCCTGGAGAAACGAAGTAATTCACAAAGGTTTTCAGAAAAGACCCCGCAGTGCCGGTaGCCGCTGGGCCGTGCAGGT +
Preference number: 2 (lower is better)
Translates to: NTAGILEKRSNSQRFSEKTPQCR*PLGRAG
Trigger: ACCTGCACGGCCCAGCGGGCACCGGCACTGCGGGGT...CTTTTCTGAAAACCTTTGTGAATTACTTCGTTTCTCCAGGATTCCCGCAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368642.4
3UTR-3UTR TCA 90 bp CGCGGCCACCCTTGGAAACCTGTAAGTGATCCACGGTCCAGGTGTGGAATGCTCATCGACGTATCACGGTaGTTAGAAATGCATCAAACT +
Preference number: 2 (lower is better)
Translates to: RGHPWKPVSDPRSRCGMLIDVSR*LEMHQT
Trigger: AGTTTGATGCATTTCTAATCACCGTGATACGTCGAT...GAGCATTCCACACCTGGACCGTGGATCACTTACAGGTTTCCAAGGGTGGCCGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368642.4
3UTR-3UTR GCA 90 bp AGTGATCCACGGTCCAGGTGTGGAATGCTCACAGTTGTCACTATGATGAATGATGGAATTCCTCAACACTaGGGGAATCCTGGAGAAACG +
Preference number: 2 (lower is better)
Translates to: SDPRSRCGMLTVVTMMNDGIPQH*GNPGET
Trigger: CGTTTCTCCAGGATTCCCGCAGTGTTGAGGAATTCC...ATCATTCATCATAGTGACAACTGTGAGCATTCCACACCTGGACCGTGGATCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
3UTR-3UTR TCA 90 bp AACACTGCGGGAATCCTGGAGAAACGAAGTAATTCACAAAGGTTTTCAGAAAAGGAAACAGTAATCCTCTaGGAACGAAGACCCCGCAGT +
Preference number: 2 (lower is better)
Translates to: NTAGILEKRSNSQRFSEKETVIL*ERRPRS
Trigger: ACTGCGGGGTCTTCGTTCTCAGAGGATTACTGTTTC...CTTTTCTGAAAACCTTTGTGAATTACTTCGTTTCTCCAGGATTCCCGCAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368642.4
3UTR GCA 72 bp AGTAATCCTCTGAGAACGAAGACCCCGCAGTGCCGGTaGCCGCTGGGCCGTGCAGGTCTCGGCCGCCCCACG +
Preference number: 3 (lower is better)
Translates to: SNPLRTKTPQCR*PLGRAGLGRPT
Trigger: CGTGGGGCGGCCGAGACCTGCACGGCCCAGCGGGCACCGGCACTGCGGGGTCTTCGTTCTCAGAGGATTACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
3UTR GCA 72 bp TTTGAAGTAGGACCGGTGGCAACCAACACGGCTCCCTaGTCCAGGCCGGGACGCCCCTCTGGGAGGAACGCG +
Preference number: 3 (lower is better)
Translates to: FEVGPVATNTAP*SRPGRPSGRNA
Trigger: CGCGTTCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCCACCGGTCCTACTTCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
3UTR CCA 72 bp CGGGACGCCCCTCTGGGAGGAACGCGCGGCCACCCTTaGAAACCTGTAAGTGATCCACGGTCCAGGTGTGGA +
Preference number: 3 (lower is better)
Translates to: RDAPLGGTRGHP*KPVSDPRSRCG
Trigger: TCCACACCTGGACCGTGGATCACTTACAGGTTTCCAAGGGTGGCCGCGCGTTCCTCCCAGAGGGGCGTCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
3UTR-3UTR CAA 90 bp GCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAACGCGACAAATGCCTTGAGATaGTTACAGAGGCTCCCGTTC +
Preference number: 3 (lower is better)
Translates to: ATNTAPCSRPGRPSGRNATNALR*LQRLPF
Trigger: GAACGGGAGCCTCTGTAACAATCTCAAGGCATTTGT...CGCGTTCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
3UTR TCA 72 bp CAAAAGAGAGAGCTTCAATATGAAACAGTAATCCTCTaGGAACGAAGACCCCGCAGTGCCGGTGCCCGCTGG +
Preference number: 3 (lower is better)
Translates to: QKRELQYETVIL*ERRPRSAGARW
Trigger: CCAGCGGGCACCGGCACTGCGGGGTCTTCGTTCTCAGAGGATTACTGTTTCATATTGAAGCTCTCTCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
3UTR-3UTR CAA 90 bp CGCGGCCACCCTTGGAAACCTGTAAGTGATCCACGGTCCAGGTGTGGAATGCTCATGATGAAAACCCTATaGCTGCTACTCAGAAACGAG +
Preference number: 3 (lower is better)
Translates to: RGHPWKPVSDPRSRCGMLMMKTL*LLLRNE
Trigger: CTCGTTTCTGAGTAGCAGCAATAGGGTTTTCATCAT...GAGCATTCCACACCTGGACCGTGGATCACTTACAGGTTTCCAAGGGTGGCCGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
3UTR CCA 72 bp GACAGAGTAAGGAATTCCTCAACACTGCGGGAATCCTaGAGAAACGAAGTAATTCACAAAGGTTTTCAGAAA +
Preference number: 3 (lower is better)
Translates to: DRVRNSSTLRES*RNEVIHKGFQK
Trigger: TTTCTGAAAACCTTTGTGAATTACTTCGTTTCTCCAGGATTCCCGCAGTGTTGAGGAATTCCTTACTCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CCA 90 bp GTGCCGGTGCCCGCTGGGCCGTGCAGGTCTCGGCCGCCCCACGCCCGTGTCCGTAGTGCCGGTGCCCGCTaGGCCGTGCAGGTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: VPVPAGPCRSRPPHARVRSAGAR*AVQVSA
Trigger: GGCCGAGACCTGCACGGCCCAGCGGGCACCGGCACT...ACGGACACGGGCGTGGGGCGGCCGAGACCTGCACGGCCCAGCGGGCACCGGCAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CCA 90 bp GTGCCGGTGCCCGCTGGGCCGTGCAGGTCTCGGCCGCCCCACGCCCGTGTCCGTATCCGGGCACCGGGGTaGAGGCCACTGGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: VPVPAGPCRSRPPHARVRIRAPG*RPLACC
Trigger: GCAACAGGCCAGTGGCCTCCACCCCGGTGCCCGGAT...ACGGACACGGGCGTGGGGCGGCCGAGACCTGCACGGCCCAGCGGGCACCGGCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR GCA 90 bp CCGGTGGCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGACCCCGCAGTGCCGGTaGCCGCTGGGCCGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PVATNTAPCSRPGRPSGRTPQCR*PLGRAG
Trigger: ACCTGCACGGCCCAGCGGGCACCGGCACTGCGGGGT...CCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCCACCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CCA 90 bp CCCACGCCCGTGTCCGTCTCCACCGTGACCCCCTCGCCCCCGGCACGCCCAGGGCGGGGTGGAGGCCACTaGCCTGTTGCCTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PTPVSVSTVTPSPPARPGRGGGH*PVASGC
Trigger: ACAGCCAGAGGCAACAGGCCAGTGGCCTCCACCCCG...CCCTGGGCGTGCCGGGGGCGAGGGGGTCACGGTGGAGACGGACACGGGCGTGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CCA 90 bp GAACGAAGACCCCGCAGTGCCGGTGCCCGCTGGGCCGTGCAGGTCTCGGCCGCCAACAGCCACTGCCCGTaGAGCGCGGGGAAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: ERRPRSAGARWAVQVSAANSHCP*SAGKGC
Trigger: GCACCCCTTCCCCGCGCTCCACGGGCAGTGGCTGTT...GGCGGCCGAGACCTGCACGGCCCAGCGGGCACCGGCACTGCGGGGTCTTCGTTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR GCA 90 bp CGGTGGCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAACCAACACGGCTCCCTaGTCCAGGCCGGGACGCCCC +
Preference number: 4 (lower is better)
Translates to: RWQPTRLPAPGRDAPLGGTNTAP*SRPGRP
Trigger: GGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGT...TCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCCACCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CCA 90 bp CTGAGAACGAAGACCCCGCAGTGCCGGTGCCCGCTGGGCCGTGCAGGTCTCGGCGCCGCCGCTGGAACCTaGCGCCCGCCTGCATCCTAC +
Preference number: 4 (lower is better)
Translates to: LRTKTPQCRCPLGRAGLGAAAGT*RPPASY
Trigger: GTAGGATGCAGGCGGGCGCCAGGTTCCAGCGGCGGC...GCCGAGACCTGCACGGCCCAGCGGGCACCGGCACTGCGGGGTCTTCGTTCTCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CCA 90 bp GGTGGCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAAGGTCCACGGAGACCATaGCAGCGGCGGCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: GGNQHGSLLQAGTPLWEEGPRRP*QRRRRW
Trigger: CCACCGCCGCCGCCGCTGCCATGGTCTCCGTGGACC...TTCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR GCA 90 bp CAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAACGCGCGGCCCTGGTGCCTCCAGCTTaGGTTTGTGGGGCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: QHGSLLQAGTPLWEERAALVPPA*VCGAGP
Trigger: AGGACCCGCCCCACAAACGCAAGCTGGAGGCACCAG...GGCCGCGCGTTCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CCA 90 bp CGTGCAGGTCTCGGCCGCCCCACGCCCGTGTCCGTCTCCACCGTGACCCCCTCGTTGCCTCCTCTGGCTTaGGACTCCCGCAGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: RAGLGRPTPVSVSTVTPSLPPLA*DSRSLR
Trigger: CCGAAGGCTGCGGGAGTCCCAAGCCAGAGGAGGCAA...CGAGGGGGTCACGGTGGAGACGGACACGGGCGTGGGGCGGCCGAGACCTGCACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CCA 90 bp GGCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAACGCCCATCCCGGCTCTTCTaGGCCCGCAGCATCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GNQHGSLLQAGTPLWEERPSRLF*ARSIRA
Trigger: TGCCCTGATGCTGCGGGCCCAGAAGAGCCGGGATGG...GCGTTCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR TCA 90 bp GCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAACGCGCCACCTGGGATGGGCTaGGGTGCTAACACCACCGTG +
Preference number: 4 (lower is better)
Translates to: ATNTAPCSRPGRPSGRNAPPGMG*GANTTV
Trigger: CACGGTGGTGTTAGCACCTCAGCCCATCCCAGGTGG...CGCGTTCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR GCA 90 bp GTGCCGGTGCCCGCTGGGCCGTGCAGGTCTCGGCCGCCCCACGCCCGTGTCCGTGTTGTCAGTTGCTGGTaGCTCCAGCTTGCGTTTGTG +
Preference number: 4 (lower is better)
Translates to: VPVPAGPCRSRPPHARVRVVSCW*LQLAFV
Trigger: CACAAACGCAAGCTGGAGGCACCAGCAACTGACAAC...ACGGACACGGGCGTGGGGCGGCCGAGACCTGCACGGCCCAGCGGGCACCGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR GCA 90 bp CCGGTGGCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAGAGGCTCCCGTTCCTaGTTCCCCACAGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PVATNTAPCSRPGRPSGRRGSRS*FPTVLQ
Trigger: CTGCAGGACTGTGGGGAAGCAGGAACGGGAGCCTCT...CCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCCACCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR GCA 90 bp GCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAACGCGAGGCCACTGGCCTGTTaGCTCTGGCTGTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: ATNTAPCSRPGRPSGRNARPLAC*LWLCCP
Trigger: AGGACAGCACAGCCAGAGGCAACAGGCCAGTGGCCT...CGCGTTCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CCA 90 bp CTGGGCCGTGCAGGTCTCGGCCGCCCCACGCCCGTGTCCGTCTCCACCGTGACCGCTGTTGTCAGTTGCTaGTGCCTCCAGCTTGCGTTT +
Preference number: 4 (lower is better)
Translates to: LGRAGLGRPTPVSVSTVTAVVSC*CLQLAF
Trigger: AAACGCAAGCTGGAGGCACCAGCAACTGACAACAGC...GGTCACGGTGGAGACGGACACGGGCGTGGGGCGGCCGAGACCTGCACGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR TCA 90 bp GAACGAAGACCCCGCAGTGCCGGTGCCCGCTGGGCCGTGCAGGTCTCGGCCGCCAGAGACACAGCTACTTaGTTTGCCAGCAAACGAGGC +
Preference number: 4 (lower is better)
Translates to: ERRPRSAGARWAVQVSAARDTAT*FASKRG
Trigger: GCCTCGTTTGCTGGCAAATCAAGTAGCTGTGTCTCT...GGCGGCCGAGACCTGCACGGCCCAGCGGGCACCGGCACTGCGGGGTCTTCGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR GCA 90 bp CTGGGCCGTGCAGGTCTCGGCCGCCCCACGCCCGTGTCCGTCTCCACCGTGACCTTTCCCAATAGGGGTTaGAAGAGCAGAAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LGRAGLGRPTPVSVSTVTFPNRG*KSRRAE
Trigger: CTCTGCCCTTCTGCTCTTGCAACCCCTATTGGGAAA...GGTCACGGTGGAGACGGACACGGGCGTGGGGCGGCCGAGACCTGCACGGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR GCA 90 bp GAACGAAGACCCCGCAGTGCCGGTGCCCGCTGGGCCGTGCAGGTCTCGGCCGCCGGAATTCCTCAACACTaGGGGAATCCTGGAGAAACG +
Preference number: 4 (lower is better)
Translates to: ERRPRSAGARWAVQVSAAGIPQH*GNPGET
Trigger: CGTTTCTCCAGGATTCCCGCAGTGTTGAGGAATTCC...GGCGGCCGAGACCTGCACGGCCCAGCGGGCACCGGCACTGCGGGGTCTTCGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CCA 90 bp CGGTGGCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAACCTTAAGGCTGTTATaGCAGCCACCTGGGATGGGC +
Preference number: 4 (lower is better)
Translates to: RWQPTRLPAPGRDAPLGGTLRLL*QPPGMG
Trigger: GCCCATCCCAGGTGGCTGCCATAACAGCCTTAAGGT...TCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCCACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR GCA 90 bp CCGGTGGCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGTCCCAGACAGACAGGTaGATCGTTGGGTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PVATNTAPCSRPGRPSGRSQTDR*IVGLKK
Trigger: CTTCTTCAACCCAACGATGCACCTGTCTGTCTGGGA...CCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCCACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR GCA 90 bp CCGGTGGCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGTTTGTCCTCTCTCTTTaGCTCCTCTGGCTTGGGACT +
Preference number: 4 (lower is better)
Translates to: PVATNTAPCSRPGRPSGRFVLSL*LLWLGT
Trigger: AGTCCCAAGCCAGAGGAGGCAAAGAGAGAGGACAAA...CCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCCACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CCA 90 bp GGTGGCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAATCCAGCTTGCGTTTGTaGGGCGGGTCCTCAATGATC +
Preference number: 4 (lower is better)
Translates to: GGNQHGSLLQAGTPLWEESSLRL*GGSSMI
Trigger: GATCATTGAGGACCCGCCCCACAAACGCAAGCTGGA...TTCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CCA 90 bp CTGAGAACGAAGACCCCGCAGTGCCGGTGCCCGCTGGGCCGTGCAGGTCTCGGCTCCACGGTCCAGGTGTaGAATGCTCACAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: LRTKTPQCRCPLGRAGLGSTVQV*NAHSCH
Trigger: GTGACAACTGTGAGCATTCCACACCTGGACCGTGGA...GCCGAGACCTGCACGGCCCAGCGGGCACCGGCACTGCGGGGTCTTCGTTCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CCA 90 bp GGTGGCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAAACGCGCGGCCACCCTTaGAAACCTGTAAGTGATCCA +
Preference number: 4 (lower is better)
Translates to: GGNQHGSLLQAGTPLWEETRGHP*KPVSDP
Trigger: TGGATCACTTACAGGTTTCCAAGGGTGGCCGCGCGT...TTCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR GCA 90 bp CGCGGCCACCCTTGGAAACCTGTAAGTGATCCACGGTCCAGGTGTGGAATGCTCAACCTGGCGCCCGCCTaGATCCTACATCCCCGCGCT +
Preference number: 4 (lower is better)
Translates to: RGHPWKPVSDPRSRCGMLNLAPA*ILHPRA
Trigger: AGCGCGGGGATGTAGGATGCAGGCGGGCGCCAGGTT...GAGCATTCCACACCTGGACCGTGGATCACTTACAGGTTTCCAAGGGTGGCCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CCA 90 bp GGCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAACGCTGTTGTCTTCAGAACTaGACCCATCGCTGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: GNQHGSLLQAGTPLWEERCCLQN*THRCCQ
Trigger: CTGACAACAGCGATGGGTCCAGTTCTGAAGACAACA...GCGTTCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR TCA 90 bp TGGCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAACGGGTGCATCGTTGGGTTaGAGAAGAAAACTCGGTCAT +
Preference number: 4 (lower is better)
Translates to: WQPTRLPAPGRDAPLGGTGASLG*RRKLGH
Trigger: ATGACCGAGTTTTCTTCTTCAACCCAACGATGCACC...CGTTCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR TCA 90 bp GAACGAAGACCCCGCAGTGCCGGTGCCCGCTGGGCCGTGCAGGTCTCGGCCGCCATCGACGTATCACGGTaGTTAGAAATGCATCAAACT +
Preference number: 4 (lower is better)
Translates to: ERRPRSAGARWAVQVSAAIDVSR*LEMHQT
Trigger: AGTTTGATGCATTTCTAATCACCGTGATACGTCGAT...GGCGGCCGAGACCTGCACGGCCCAGCGGGCACCGGCACTGCGGGGTCTTCGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CCA 90 bp CGGTGGCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAGGCTTTTCATGCCCATaGAAAAACCTTGACTCCTCA +
Preference number: 4 (lower is better)
Translates to: RWQPTRLPAPGRDAPLGGGFSCP*KNLDSS
Trigger: TGAGGAGTCAAGGTTTTTCCATGGGCATGAAAAGCC...TCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCCACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CCA 90 bp GAACGAAGACCCCGCAGTGCCGGTGCCCGCTGGGCCGTGCAGGTCTCGGCCGCCCCCACAGTCCTGCAGTaGATTGATAATTTGTGTATA +
Preference number: 4 (lower is better)
Translates to: ERRPRSAGARWAVQVSAAPTVLQ*IDNLCI
Trigger: TATACACAAATTATCAATCCACTGCAGGACTGTGGG...GGCGGCCGAGACCTGCACGGCCCAGCGGGCACCGGCACTGCGGGGTCTTCGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CCA 90 bp GGTGGCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAAAGACAGGTGCATCGTTaGGTTGAAGAAGAAAACTCG +
Preference number: 4 (lower is better)
Translates to: GGNQHGSLLQAGTPLWEERQVHR*VEEENS
Trigger: CGAGTTTTCTTCTTCAACCCAACGATGCACCTGTCT...TTCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CCA 90 bp CGCGGCCACCCTTGGAAACCTGTAAGTGATCCACGGTCCAGGTGTGGAATGCTCTCTCTTTGCCTCCTCTaGCTTGGGACTCCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: RGHPWKPVSDPRSRCGMLSLCLL*LGTPAA
Trigger: GGCTGCGGGAGTCCCAAGCCAGAGGAGGCAAAGAGA...GAGCATTCCACACCTGGACCGTGGATCACTTACAGGTTTCCAAGGGTGGCCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CCA 90 bp CGCGGCCACCCTTGGAAACCTGTAAGTGATCCACGGTCCAGGTGTGGAATGCTCCCTAGGGACGGAGAATaGCCACCAAACAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: RGHPWKPVSDPRSRCGMLPRDGE*PPNSHC
Trigger: GCAGTGGCTGTTTGGTGGCCATTCTCCGTCCCTAGG...GAGCATTCCACACCTGGACCGTGGATCACTTACAGGTTTCCAAGGGTGGCCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR GCA 90 bp CGGTGGCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAAACTGTTCAAATATCTaGTTTCGTTCCTCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: RWQPTRLPAPGRDAPLGGNCSNI*FRSSEL
Trigger: CAACTCTGAGGAACGAAAGCAGATATTTGAACAGTT...TCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR GCA 90 bp CGCGGCCACCCTTGGAAACCTGTAAGTGATCCACGGTCCAGGTGTGGAATGCTCGGGTATTTTGATGGGTaGCAAGGTCAGGAAGTGGCG +
Preference number: 4 (lower is better)
Translates to: RGHPWKPVSDPRSRCGMLGYFDG*QGQEVA
Trigger: CGCCACTTCCTGACCTTGGCACCCATCAAAATACCC...GAGCATTCCACACCTGGACCGTGGATCACTTACAGGTTTCCAAGGGTGGCCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CCA 90 bp AGTGATCCACGGTCCAGGTGTGGAATGCTCACAGTTGTCACTATGATGAATGATGTGCTAACACCACCGTaGGGAGCGGCCTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SDPRSRCGMLTVVTMMNDVLTPP*GAAWRQ
Trigger: CTGCCTCCAGGCCGCTCCCCACGGTGGTGTTAGCAC...ATCATTCATCATAGTGACAACTGTGAGCATTCCACACCTGGACCGTGGATCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR GCA 90 bp AAGTTTTCGCCAATCGTCTTAGGTGATGACACAAATGCCTTGAGATTGTTACAGACGAAGACCCCGCAGTaGCGGTGCCCGCTGGGCCGT +
Preference number: 4 (lower is better)
Translates to: KFSPIVLGDDTNALRLLQTKTPQ*RCPLGR
Trigger: ACGGCCCAGCGGGCACCGGCACTGCGGGGTCTTCGT...CTGTAACAATCTCAAGGCATTTGTGTCATCACCTAAGACGATTGGCGAAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR GCA 90 bp CGCGGCCACCCTTGGAAACCTGTAAGTGATCCACGGTCCAGGTGTGGAATGCTCAAACGAGGCTTTTCATaGCCATGGAAAAACCTTGAC +
Preference number: 4 (lower is better)
Translates to: RGHPWKPVSDPRSRCGMLKRGFS*PWKNLD
Trigger: GTCAAGGTTTTTCCATGGGCATGAAAAGCCTCGTTT...GAGCATTCCACACCTGGACCGTGGATCACTTACAGGTTTCCAAGGGTGGCCGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR TCA 90 bp TTAAAACAATTAAGGGATCGACGTATCACGGTGATTAGAAATGCATCAAACTCTTGTCCGTCTCCACCGTaGCCCCCTCGCCCCCGGCAC +
Preference number: 4 (lower is better)
Translates to: LKQLRDRRITVIRNASNSCPSPP*PPRPRH
Trigger: GTGCCGGGGGCGAGGGGGTCACGGTGGAGACGGACA...AGAGTTTGATGCATTTCTAATCACCGTGATACGTCGATCCCTTAATTGTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CCA 90 bp GGACAGAGTAAGGAATTCCTCAACACTGCGGGAATCCTGGAGAAACGAAGTAATAGAAGGGCAGAGATGTaGGAAGACGGGCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: GQSKEFLNTAGILEKRSNRRAEM*EDGHQL
Trigger: GAGCTGGTGCCCGTCTTCCCACATCTCTGCCCTTCT...ATTACTTCGTTTCTCCAGGATTCCCGCAGTGTTGAGGAATTCCTTACTCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CCA 90 bp AACACTGCGGGAATCCTGGAGAAACGAAGTAATTCACAAAGGTTTTCAGAAAAGGCCAAGGTCAGGAAGTaGCGCGGCTGCACGCTGGAG +
Preference number: 4 (lower is better)
Translates to: NTAGILEKRSNSQRFSEKAKVRK*RGCTLE
Trigger: CTCCAGCGTGCAGCCGCGCCACTTCCTGACCTTGGC...CTTTTCTGAAAACCTTTGTGAATTACTTCGTTTCTCCAGGATTCCCGCAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR GCA 90 bp TTAAAACAATTAAGGGATCGACGTATCACGGTGATTAGAAATGCATCAAACTCTAGGAAGTGGCGCGGCTaGACGCTGGAGGGGGACGGG +
Preference number: 4 (lower is better)
Translates to: LKQLRDRRITVIRNASNSRKWRG*TLEGDG
Trigger: CCCGTCCCCCTCCAGCGTGCAGCCGCGCCACTTCCT...AGAGTTTGATGCATTTCTAATCACCGTGATACGTCGATCCCTTAATTGTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR GCA 90 bp GGACAGAGTAAGGAATTCCTCAACACTGCGGGAATCCTGGAGAAACGAAGTAATATCGCTGTTGTCAGTTaGTGGTGCCTCCAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: GQSKEFLNTAGILEKRSNIAVVS*WCLQLA
Trigger: CGCAAGCTGGAGGCACCAGCAACTGACAACAGCGAT...ATTACTTCGTTTCTCCAGGATTCCCGCAGTGTTGAGGAATTCCTTACTCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368642.4
3UTR CAA 72 bp CCAATCGTCTTAGGTGATGACACAAATGCCTTGAGATaGTTACAGAGGCTCCCGTTCCTGCTTCCCCACAGT +
Preference number: 4 (lower is better)
Translates to: PIVLGDDTNALR*LQRLPFLLPHS
Trigger: ACTGTGGGGAAGCAGGAACGGGAGCCTCTGTAACAATCTCAAGGCATTTGTGTCATCACCTAAGACGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
3UTR CAA 72 bp TTTTCGCCAATCGTCTTAGGTGATGACACAAATGCCTaGAGATTGTTACAGAGGCTCCCGTTCCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: FSPIVLGDDTNA*RLLQRLPFLLP
Trigger: GGGAAGCAGGAACGGGAGCCTCTGTAACAATCTCAAGGCATTTGTGTCATCACCTAAGACGATTGGCGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CCA 90 bp AAGTTTTCGCCAATCGTCTTAGGTGATGACACAAATGCCTTGAGATTGTTACAGAGGCAGGAGCCGGCCTaGACAGAGACACAGCTACTT +
Preference number: 4 (lower is better)
Translates to: KFSPIVLGDDTNALRLLQRQEPA*TETQLL
Trigger: AAGTAGCTGTGTCTCTGTCCAGGCCGGCTCCTGCCT...CTGTAACAATCTCAAGGCATTTGTGTCATCACCTAAGACGATTGGCGAAAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR TCA 90 bp GGACAGAGTAAGGAATTCCTCAACACTGCGGGAATCCTGGAGAAACGAAGTAATAGGATGTATCCACGTTaGGTCCAGAGCAAAGGAATT +
Preference number: 4 (lower is better)
Translates to: GQSKEFLNTAGILEKRSNRMYPR*VQSKGI
Trigger: AATTCCTTTGCTCTGGACTCAACGTGGATACATCCT...ATTACTTCGTTTCTCCAGGATTCCCGCAGTGTTGAGGAATTCCTTACTCTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR TCA 90 bp AAGTTTTCGCCAATCGTCTTAGGTGATGACACAAATGCCTTGAGATTGTTACAGACAAGTCGGAACCTCTaGTCCCGGCCGTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: KFSPIVLGDDTNALRLLQTSRNL*SRPYFS
Trigger: AGAGAAATACGGCCGGGATCAGAGGTTCCGACTTGT...CTGTAACAATCTCAAGGCATTTGTGTCATCACCTAAGACGATTGGCGAAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR TCA 90 bp AACACTGCGGGAATCCTGGAGAAACGAAGTAATTCACAAAGGTTTTCAGAAAAGCCCATGGAAAAACCTTaGCTCCTCAGGATGTATCCA +
Preference number: 4 (lower is better)
Translates to: NTAGILEKRSNSQRFSEKPMEKP*LLRMYP
Trigger: TGGATACATCCTGAGGAGTCAAGGTTTTTCCATGGG...CTTTTCTGAAAACCTTTGTGAATTACTTCGTTTCTCCAGGATTCCCGCAGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR TCA 90 bp TTAAAACAATTAAGGGATCGACGTATCACGGTGATTAGAAATGCATCAAACTCTTCCGGAGGGGTATTTTaGTGGGTGCCAAGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: LKQLRDRRITVIRNASNSSGGVF*WVPRSG
Trigger: TCCTGACCTTGGCACCCATCAAAATACCCCTCCGGA...AGAGTTTGATGCATTTCTAATCACCGTGATACGTCGATCCCTTAATTGTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR GCA 90 bp AAGTTTTCGCCAATCGTCTTAGGTGATGACACAAATGCCTTGAGATTGTTACAGGCTTCCCCACAGTCCTaGAGTGGATTGATAATTTGT +
Preference number: 4 (lower is better)
Translates to: KFSPIVLGDDTNALRLLQASPQS*SGLIIC
Trigger: ACAAATTATCAATCCACTGCAGGACTGTGGGGAAGC...CTGTAACAATCTCAAGGCATTTGTGTCATCACCTAAGACGATTGGCGAAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CCA 90 bp AACACTGCGGGAATCCTGGAGAAACGAAGTAATTCACAAAGGTTTTCAGAAAAGACACTGCGGGAATCCTaGAGAAACGAAGTAATTCAC +
Preference number: 4 (lower is better)
Translates to: NTAGILEKRSNSQRFSEKTLRES*RNEVIH
Trigger: GTGAATTACTTCGTTTCTCCAGGATTCCCGCAGTGT...CTTTTCTGAAAACCTTTGTGAATTACTTCGTTTCTCCAGGATTCCCGCAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR GCA 90 bp TTAAAACAATTAAGGGATCGACGTATCACGGTGATTAGAAATGCATCAAACTCTCACAGCTACTTGATTTaGCAGCAAACGAGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LKQLRDRRITVIRNASNSHSYLI*QQTRLF
Trigger: GAAAAGCCTCGTTTGCTGGCAAATCAAGTAGCTGTG...AGAGTTTGATGCATTTCTAATCACCGTGATACGTCGATCCCTTAATTGTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS GCA 90 bp GCGTCCATCGGCCAGAGGAGAGGCTGCCGCCGCCGGGGCTGCTGCTaGTGCAGCTGCCGCCGCCGCCGCTGGAACCTGGCGCCCGCCTGC +
Preference number: 5 (lower is better)
Translates to: ASIGQRRGCRRRGCC*CSCRRRRWNLAPAC
Trigger: GCAGGCGGGCGCCAGGTTCCAGCGGCGGCGGCGGCAGCTGCAGCAGCAGCAGCCCCGGCGGCGGCAGCCTCTCCTCTGGCCGATGGACGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS GCA 90 bp CGAGCCCGGCACCATCCAGACCCAGGGCGGCGGCGGCGGCGGCTCTaGGTCCATCGGCCAGAGGAGAGGCTGCCGCCGCCGGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: RARHHPDPGRRRRRL*VHRPEERLPPPGLL
Trigger: CAGCAGCCCCGGCGGCGGCAGCCTCTCCTCTGGCCGATGGACGCAGAGCCGCCGCCGCCGCCGCCCTGGGTCTGGATGGTGCCGGGCTCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS GCA 90 bp TCTGCGTCCATCGGCCAGAGGAGAGGCTGCCGCCGCCGGGGCTGCTaGTGCTGCAGCTGCCGCCGCCGCCGCTGGAACCTGGCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: SASIGQRRGCRRRGC*CCSCRRRRWNLAPA
Trigger: GGCGGGCGCCAGGTTCCAGCGGCGGCGGCGGCAGCTGCAGCAGCAGCAGCCCCGGCGGCGGCAGCCTCTCCTCTGGCCGATGGACGCAGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS GCA 90 bp GGCTCTGCGTCCATCGGCCAGAGGAGAGGCTGCCGCCGCCGGGGCTaGTGCTGCTGCAGCTGCCGCCGCCGCCGCTGGAACCTGGCGCCC +
Preference number: 5 (lower is better)
Translates to: GSASIGQRRGCRRRG*CCCSCRRRRWNLAP
Trigger: GGGCGCCAGGTTCCAGCGGCGGCGGCGGCAGCTGCAGCAGCAGCAGCCCCGGCGGCGGCAGCCTCTCCTCTGGCCGATGGACGCAGAGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS CCA 90 bp TGCCGCCGCCGGGGCTGCTGCTGCTGCAGCTGCCGCCGCCGCCGCTaGAACCTGGCGCCCGCCTGCATCCTACATCCCCGCGCTGACGGC +
Preference number: 5 (lower is better)
Translates to: CRRRGCCCCSCRRRR*NLAPACILHPRADG
Trigger: GCCGTCAGCGCGGGGATGTAGGATGCAGGCGGGCGCCAGGTTCCAGCGGCGGCGGCGGCAGCTGCAGCAGCAGCAGCCCCGGCGGCGGCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS GCA 90 bp TCCATCGGCCAGAGGAGAGGCTGCCGCCGCCGGGGCTGCTGCTGCTaGAGCTGCCGCCGCCGCCGCTGGAACCTGGCGCCCGCCTGCATC +
Preference number: 5 (lower is better)
Translates to: SIGQRRGCRRRGCCC*SCRRRRWNLAPACI
Trigger: GATGCAGGCGGGCGCCAGGTTCCAGCGGCGGCGGCGGCAGCTGCAGCAGCAGCAGCCCCGGCGGCGGCAGCCTCTCCTCTGGCCGATGGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS GCA 90 bp GGCCAGAGGAGAGGCTGCCGCCGCCGGGGCTGCTGCTGCTGCAGCTaGCGCCGCCGCCGCTGGAACCTGGCGCCCGCCTGCATCCTACAT +
Preference number: 5 (lower is better)
Translates to: GQRRGCRRRGCCCCS*RRRRWNLAPACILH
Trigger: ATGTAGGATGCAGGCGGGCGCCAGGTTCCAGCGGCGGCGGCGGCAGCTGCAGCAGCAGCAGCCCCGGCGGCGGCAGCCTCTCCTCTGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CAA 90 bp CTGGGCCGTGCAGGTCTCGGCCGCCCCACGCCCGTGTCCGTCTCCACCGTGACCGCTGGTGCCTCCAGCTaGCGTTTGTGGGGCGGGTCC +
Preference number: 5 (lower is better)
Translates to: LGRAGLGRPTPVSVSTVTAGASS*RLWGGS
Trigger: GGACCCGCCCCACAAACGCAAGCTGGAGGCACCAGC...GGTCACGGTGGAGACGGACACGGGCGTGGGGCGGCCGAGACCTGCACGGCCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CAA 90 bp CTGGGCCGTGCAGGTCTCGGCCGCCCCACGCCCGTGTCCGTCTCCACCGTGACCGGCCCCGCTCTGTCCTaGTATCTGAGACGGGGGACG +
Preference number: 5 (lower is better)
Translates to: LGRAGLGRPTPVSVSTVTGPALS*YLRRGT
Trigger: CGTCCCCCGTCTCAGATACAAGGACAGAGCGGGGCC...GGTCACGGTGGAGACGGACACGGGCGTGGGGCGGCCGAGACCTGCACGGCCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CAA 90 bp CTGGGCCGTGCAGGTCTCGGCCGCCCCACGCCCGTGTCCGTCTCCACCGTGACCGCGGGGGCGGCGTCCTaGTGCCTTTGTCCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: LGRAGLGRPTPVSVSTVTAGAAS*CLCPLS
Trigger: AGAGAGAGGACAAAGGCACAAGGACGCCGCCCCCGC...GGTCACGGTGGAGACGGACACGGGCGTGGGGCGGCCGAGACCTGCACGGCCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CAA 90 bp GAACGAAGACCCCGCAGTGCCGGTGCCCGCTGGGCCGTGCAGGTCTCGGCCGCCGCCTCCAGCTTGCGTTaGTGGGGCGGGTCCTCAATG +
Preference number: 5 (lower is better)
Translates to: ERRPRSAGARWAVQVSAAASSLR*WGGSSM
Trigger: CATTGAGGACCCGCCCCACAAACGCAAGCTGGAGGC...GGCGGCCGAGACCTGCACGGCCCAGCGGGCACCGGCACTGCGGGGTCTTCGTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS CCA 90 bp ATCGGTGGAGGCTCCTTGTCTTCTTTGTCTCCATCCCGGCTCTTCTaGGCCCGCAGCATCAGGGCAGGAGGGCGGGCCACTCGGCCCCGC +
Preference number: 5 (lower is better)
Translates to: IGGGSLSSLSPSRLF*ARSIRAGGRATRPR
Trigger: GCGGGGCCGAGTGGCCCGCCCTCCTGCCCTGATGCTGCGGGCCCAGAAGAGCCGGGATGGAGACAAAGAAGACAAGGAGCCTCCACCGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CAA 90 bp CCGGTGGCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGGGCGTCCTTGTGCCTTaGTCCTCTCTCTTTGCCTCC +
Preference number: 5 (lower is better)
Translates to: PVATNTAPCSRPGRPSGRGVLVP*SSLFAS
Trigger: GGAGGCAAAGAGAGAGGACAAAGGCACAAGGACGCC...CCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCCACCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CAA 90 bp GCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAACGCGGTCCGGAGGGGTATTTaGATGGGTGCCAAGGTCAGG +
Preference number: 5 (lower is better)
Translates to: ATNTAPCSRPGRPSGRNAVRRGI*MGAKVR
Trigger: CCTGACCTTGGCACCCATCAAAATACCCCTCCGGAC...CGCGTTCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CAA 90 bp GCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAACGCGCATCGCTGTTGTCAGTaGCTGGTGCCTCCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: ATNTAPCSRPGRPSGRNAHRCCQ*LVPPAC
Trigger: GCAAGCTGGAGGCACCAGCAACTGACAACAGCGATG...CGCGTTCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS GCA 90 bp CACGCTCCTCCAGAGGCAGGAGGATCTGCGGGGGCGGCGTCCTTGTaGCTTTGTCCTCTCTCTTTGCCTCCTCTGGCTTGGGACTCCCGC +
Preference number: 5 (lower is better)
Translates to: HAPPEAGGSAGAASL*LCPLSLPPLAWDSR
Trigger: GCGGGAGTCCCAAGCCAGAGGAGGCAAAGAGAGAGGACAAAGGCACAAGGACGCCGCCCCCGCAGATCCTCCTGCCTCTGGAGGAGCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368642.4
ENST00000483040.1
CDS CCA 90 bp GACAGAGTGAGACTCTTGTCTTCTTTGTCTCCATCCCGGCTCTTCTaGGCCCGCAGCATCAGGGCAGGAGGGCGGGCCACTCGGCCCCGC +
Preference number: 5 (lower is better)
Translates to: DRVRLLSSLSPSRLF*ARSIRAGGRATRPR
Trigger: GCGGGGCCGAGTGGCCCGCCCTCCTGCCCTGATGCTGCGGGCCCAGAAGAGCCGGGATGGAGACAAAGAAGACAAGAGTCTCACTCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS-3UTR CAA 90 bp GAACGAAGACCCCGCAGTGCCGGTGCCCGCTGGGCCGTGCAGGTCTCGGCCGCCGCCCATGGAAAAACCTaGACTCCTCAGGATGTATCC +
Preference number: 5 (lower is better)
Translates to: ERRPRSAGARWAVQVSAAAHGKT*TPQDVS
Trigger: GGATACATCCTGAGGAGTCAAGGTTTTTCCATGGGC...GGCGGCCGAGACCTGCACGGCCCAGCGGGCACCGGCACTGCGGGGTCTTCGTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS GCA 90 bp GAGGATCTGCGGGGGCGGCGTCCTTGTGCCTTTGTCCTCTCTCTTTaGCTCCTCTGGCTTGGGACTCCCGCAGCCTTCGGTCCGGTTCCT +
Preference number: 5 (lower is better)
Translates to: EDLRGRRPCAFVLSL*LLWLGTPAAFGPVP
Trigger: AGGAACCGGACCGAAGGCTGCGGGAGTCCCAAGCCAGAGGAGGCAAAGAGAGAGGACAAAGGCACAAGGACGCCGCCCCCGCAGATCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368642.4
ENST00000483040.1
CDS-3UTR CAA 90 bp TGGCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAACGTCCTCAATGATCCTGTaGAGGTCTCCGCGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: WQPTRLPAPGRDAPLGGTSSMIL*RSPRSF
Trigger: GAAGGACCGCGGAGACCTCAACAGGATCATTGAGGA...CGTTCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CAA 90 bp GAACGAAGACCCCGCAGTGCCGGTGCCCGCTGGGCCGTGCAGGTCTCGGCCGCCACAAATGCCTTGAGATaGTTACAGAGGCTCCCGTTC +
Preference number: 5 (lower is better)
Translates to: ERRPRSAGARWAVQVSAATNALR*LQRLPF
Trigger: GAACGGGAGCCTCTGTAACAATCTCAAGGCATTTGT...GGCGGCCGAGACCTGCACGGCCCAGCGGGCACCGGCACTGCGGGGTCTTCGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS CCA 90 bp CACCTGGGATGGGCTGAGGTGCTAACACCACCGTGGGGAGCGGCCTaGAGGCAGGAGCCGGCCTGGACAGAGACACAGCTACTTGATTTG +
Preference number: 5 (lower is better)
Translates to: HLGWAEVLTPPWGAA*RQEPAWTETQLLDL
Trigger: CAAATCAAGTAGCTGTGTCTCTGTCCAGGCCGGCTCCTGCCTCCAGGCCGCTCCCCACGGTGGTGTTAGCACCTCAGCCCATCCCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS CCA 90 bp TGTCACAACTGCCTCTGTGCAGTCAGCGCTGTGTGGTCTGCAGCCTaGGAGCCACGGTCTACACCATGCAGCCCAGGCGTGCAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: CHNCLCAVSAVWSAA*EPRSTPCSPGVQEA
Trigger: AGCCTCCTGCACGCCTGGGCTGCATGGTGTAGACCGTGGCTCCCAGGCTGCAGACCACACAGCGCTGACTGCACAGAGGCAGTTGTGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS-3UTR CAA 90 bp CAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAACGCGCGGCCACACAGCTACTTGATTaGCCAGCAAACGAGGCTTTT +
Preference number: 5 (lower is better)
Translates to: QHGSLLQAGTPLWEERAATQLLD*PANEAF
Trigger: AAAAGCCTCGTTTGCTGGCAAATCAAGTAGCTGTGT...GGCCGCGCGTTCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS CCA 90 bp CGGGGGCGGCGTCCTTGTGCCTTTGTCCTCTCTCTTTGCCTCCTCTaGCTTGGGACTCCCGCAGCCTTCGGTCCGGTTCCTCTTGGTTTT +
Preference number: 5 (lower is better)
Translates to: RGRRPCAFVLSLCLL*LGTPAAFGPVPLGF
Trigger: AAAACCAAGAGGAACCGGACCGAAGGCTGCGGGAGTCCCAAGCCAGAGGAGGCAAAGAGAGAGGACAAAGGCACAAGGACGCCGCCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368642.4
ENST00000483040.1
CDS-3UTR CAA 90 bp GGCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAACGCAGGTGCATCGTTGGGTaGAAGAAGAAAACTCGGTCA +
Preference number: 5 (lower is better)
Translates to: GNQHGSLLQAGTPLWEERRCIVG*KKKTRS
Trigger: TGACCGAGTTTTCTTCTTCAACCCAACGATGCACCT...GCGTTCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CAA 90 bp GAACGAAGACCCCGCAGTGCCGGTGCCCGCTGGGCCGTGCAGGTCTCGGCCGCCATGATGAAAACCCTATaGCTGCTACTCAGAAACGAG +
Preference number: 5 (lower is better)
Translates to: ERRPRSAGARWAVQVSAAMMKTL*LLLRNE
Trigger: CTCGTTTCTGAGTAGCAGCAATAGGGTTTTCATCAT...GGCGGCCGAGACCTGCACGGCCCAGCGGGCACCGGCACTGCGGGGTCTTCGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS TCA 90 bp ACCATGCAGCCCAGGCGTGCAGGAGGCTGTGCCACCAGGCCTGTGTaGGCACACCCTGTGATGTGCATAAAAGGATGTCGGATGCCACTG +
Preference number: 5 (lower is better)
Translates to: TMQPRRAGGCATRPV*AHPVMCIKGCRMPL
Trigger: CAGTGGCATCCGACATCCTTTTATGCACATCACAGGGTGTGCTCACACAGGCCTGGTGGCACAGCCTCCTGCACGCCTGGGCTGCATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CCA 90 bp GTGCTAACACCACCGTGGGGAGCGGCCTGGAGGCAGGAGCCGGCCTaGACAGAGACACAGCTACTTGATTTGCCAGCAAACGAGGCTTTT +
Preference number: 5 (lower is better)
Translates to: VLTPPWGAAWRQEPA*TETQLLDLPANEAF
Trigger: AAAAGCCTCGTTTGCTGGCAAATCAAGTAGCTGTGTCTCTGTCCAGGCCGGCTCCTGCCTCCAGGCCGCTCCCCACGGTGGTGTTAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS CCA 90 bp GACCCATCGCTGTTGTCAGTTGCTGGTGCCTCCAGCTTGCGTTTGTaGGGCGGGTCCTCAATGATCCTGTTGAGGTCTCCGCGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: DPSLLSVAGASSLRL*GGSSMILLRSPRSF
Trigger: GAAGGACCGCGGAGACCTCAACAGGATCATTGAGGACCCGCCCCACAAACGCAAGCTGGAGGCACCAGCAACTGACAACAGCGATGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368642.4
ENST00000483040.1
CDS CCA 90 bp TCACCCCGAGGCACTCCCAGGGTACAGAGGAGCTTTAGCTACAAATaGAAGGCTGGAGGCACCAGGAGCCTGCCACCGACACTGACCATG +
Preference number: 5 (lower is better)
Translates to: SPRGTPRVQRSFSYK*KAGGTRSLPPTLTM
Trigger: CATGGTCAGTGTCGGTGGCAGGCTCCTGGTGCCTCCAGCCTTCCATTTGTAGCTAAAGCTCCTCTGTACCCTGGGAGTGCCTCGGGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS TCA 90 bp GCTACAAATGGAAGGCTGGAGGCACCAGGAGCCTGCCACCGACACTaGCCATGGCATAGAAGCCAGGGGTGCCAGTCTGTCCAGATTGGA +
Preference number: 5 (lower is better)
Translates to: ATNGRLEAPGACHRH*PWHRSQGCQSVQIG
Trigger: TCCAATCTGGACAGACTGGCACCCCTGGCTTCTATGCCATGGTCAGTGTCGGTGGCAGGCTCCTGGTGCCTCCAGCCTTCCATTTGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CCA 90 bp GCGGCGTCCTTGTGCCTTTGTCCTCTCTCTTTGCCTCCTCTGGCTTaGGACTCCCGCAGCCTTCGGTCCGGTTCCTCTTGGTTTTCACAT +
Preference number: 5 (lower is better)
Translates to: AASLCLCPLSLPPLA*DSRSLRSGSSWFSH
Trigger: ATGTGAAAACCAAGAGGAACCGGACCGAAGGCTGCGGGAGTCCCAAGCCAGAGGAGGCAAAGAGAGAGGACAAAGGCACAAGGACGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368642.4
ENST00000483040.1
CDS CCA 90 bp AGCTTCAGGGAGGGTGCTGGTCTCCAGAAACACCAACCACGTGACTaGAGGGCCGTCACTTTCAGCGCTGCCCAACCCTCTGAGTCCTTT +
Preference number: 5 (lower is better)
Translates to: SFREGAGLQKHQPRD*RAVTFSAAQPSESF
Trigger: AAAGGACTCAGAGGGTTGGGCAGCGCTGAAAGTGACGGCCCTCCAGTCACGTGGTTGGTGTTTCTGGAGACCAGCACCCTCCCTGAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS TCA 90 bp GAGGATTCCACAGGGTCTTGGGGAACGTTTCCCCATCCTGCAGCGTaGTATGCGGCAGTGTGCCTGCCTTGGAGACACTGGAGAGTTTGC +
Preference number: 5 (lower is better)
Translates to: EDSTGSWGTFPHPAA*YAAVCLPWRHWRVC
Trigger: GCAAACTCTCCAGTGTCTCCAAGGCAGGCACACTGCCGCATATCACGCTGCAGGATGGGGAAACGTTCCCCAAGACCCTGTGGAATCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS GCA 90 bp AATACCCAGGATTCATCGGCAAAGACCCACGCCGAGGGAGGGGAGTaGAGCAGCCAGGGAACCGTTTTCATTTGCTGGATCGCACGAAGC +
Preference number: 5 (lower is better)
Translates to: NTQDSSAKTHAEGGE*SSQGTVFICWIARS
Trigger: GCTTCGTGCGATCCAGCAAATGAAAACGGTTCCCTGGCTGCTGCACTCCCCTCCCTCGGCGTGGGTCTTTGCCGATGAATCCTGGGTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CCA 90 bp GCCGAGGGAGGGGAGTGCAGCAGCCAGGGAACCGTTTTCATTTGCTaGATCGCACGAAGCCTTGCTCATGGTAACACAATATCGCTGGGG +
Preference number: 5 (lower is better)
Translates to: AEGGECSSQGTVFIC*IARSLAHGNTISLG
Trigger: CCCCAGCGATATTGTGTTACCATGAGCAAGGCTTCGTGCGATCCAGCAAATGAAAACGGTTCCCTGGCTGCTGCACTCCCCTCCCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS-3UTR CAA 90 bp GGTGGCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGAACAGTTAGGAATCCTTTaGTCTATCCAACTTTTCCCA +
Preference number: 5 (lower is better)
Translates to: GGNQHGSLLQAGTPLWEEQLGIL*SIQLFP
Trigger: TGGGAAAAGTTGGATAGACAAAAGGATTCCTAACTG...TTCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CAA 90 bp CGGTGGCAACCAACACGGCTCCCTGCTCCAGGCCGGGACGCCCCTCTGGGAGGACTTAGTCTGTTTTCCTaGTCCCGTTTCTTAAGAATA +
Preference number: 5 (lower is better)
Translates to: RWQPTRLPAPGRDAPLGGLSLFS*SRFLRI
Trigger: TATTCTTAAGAAACGGGACAAGGAAAACAGACTAAG...TCCTCCCAGAGGGGCGTCCCGGCCTGGAGCAGGGAGCCGTGTTGGTTGCCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS TCA 90 bp TCAGGTCCATGGGCTTCTCCCAGACAGACAGGTGCATCGTTGGGTTaGAGAAGAAAACTCGGTCATCGCCCGTCCAGACCACACACCAGG +
Preference number: 5 (lower is better)
Translates to: SGPWASPRQTGASLG*RRKLGHRPSRPHTR
Trigger: CCTGGTGTGTGGTCTGGACGGGCGATGACCGAGTTTTCTTCTTCAACCCAACGATGCACCTGTCTGTCTGGGAGAAGCCCATGGACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS GCA 90 bp TTCCACAGGGTCTTGGGGAACGTTTCCCCATCCTGCAGCGTGATATaGGGCAGTGTGCCTGCCTTGGAGACACTGGAGAGTTTGCCTGTA +
Preference number: 5 (lower is better)
Translates to: FHRVLGNVSPSCSVI*GSVPALETLESLPV
Trigger: TACAGGCAAACTCTCCAGTGTCTCCAAGGCAGGCACACTGCCGCATATCACGCTGCAGGATGGGGAAACGTTCCCCAAGACCCTGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS GCA 90 bp CACGCCGAGGGAGGGGAGTGCAGCAGCCAGGGAACCGTTTTCATTTaGTGGATCGCACGAAGCCTTGCTCATGGTAACACAATATCGCTG +
Preference number: 5 (lower is better)
Translates to: HAEGGECSSQGTVFI*WIARSLAHGNTISL
Trigger: CAGCGATATTGTGTTACCATGAGCAAGGCTTCGTGCGATCCAGCAAATGAAAACGGTTCCCTGGCTGCTGCACTCCCCTCCCTCGGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS GCA 90 bp CTCAAAGAAGACCGATGCGTCCTCCCTCAGCTTAGCGAGTGCAACTaGAAGTCAGAGGACGGTGCACGGGAGAAAGTGACACAGGCTGAT +
Preference number: 5 (lower is better)
Translates to: LKEDRCVLPQLSECN*KSEDGAREKVTQAD
Trigger: ATCAGCCTGTGTCACTTTCTCCCGTGCACCGTCCTCTGACTTGCAGTTGCACTCGCTAAGCTGAGGGAGGACGCATCGGTCTTCTTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS GCA 90 bp CACACACTCAAAGAAGACCGATGCGTCCTCCCTCAGCTTAGCGAGTaGAACTGCAAGTCAGAGGACGGTGCACGGGAGAAAGTGACACAG +
Preference number: 5 (lower is better)
Translates to: HTLKEDRCVLPQLSE*NCKSEDGAREKVTQ
Trigger: CTGTGTCACTTTCTCCCGTGCACCGTCCTCTGACTTGCAGTTGCACTCGCTAAGCTGAGGGAGGACGCATCGGTCTTCTTTGAGTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CCA 90 bp GTCCTTCAGGTCCATGGGCTTCTCCCAGACAGACAGGTGCATCGTTaGGTTGAAGAAGAAAACTCGGTCATCGCCCGTCCAGACCACACA +
Preference number: 5 (lower is better)
Translates to: VLQVHGLLPDRQVHR*VEEENSVIARPDHT
Trigger: TGTGTGGTCTGGACGGGCGATGACCGAGTTTTCTTCTTCAACCCAACGATGCACCTGTCTGTCTGGGAGAAGCCCATGGACCTGAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368642.4
ENST00000483040.1
CDS CCA 90 bp CGCTTCCTGAGTTCTGTGAGTGGTCCTAGCAAATCACCACTGAAGTaGAGAGGAGGTCATGGGAACCCCAGATCTGTGGTCAGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: RFLSSVSGPSKSPLK*RGGHGNPRSVVSWA
Trigger: TGCCCAGCTGACCACAGATCTGGGGTTCCCATGACCTCCTCTCCACTTCAGTGGTGATTTGCTAGGACCACTCACAGAACTCAGGAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS TCA 90 bp TCAGGTCCATGGGCTTCTCCCAGACAGACAGGTGCATCGTTGGGTTaGAGAAGAAAACTCGGTCATCGCCCGTCCAGACCACACACTCAA +
Preference number: 5 (lower is better)
Translates to: SGPWASPRQTGASLG*RRKLGHRPSRPHTQ
Trigger: TTGAGTGTGTGGTCTGGACGGGCGATGACCGAGTTTTCTTCTTCAACCCAACGATGCACCTGTCTGTCTGGGAGAAGCCCATGGACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CCA 90 bp GGACTCCCGCAGCCTTCGGTCCGGTTCCTCTTGGTTTTCACATCTTaGTCTTCCCTGTTGTCTTCAGAACTGGACCCATCGCTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: GLPQPSVRFLLVFTS*SSLLSSELDPSLLS
Trigger: TGACAACAGCGATGGGTCCAGTTCTGAAGACAACAGGGAAGACCAAGATGTGAAAACCAAGAGGAACCGGACCGAAGGCTGCGGGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368642.4
ENST00000483040.1
CDS TCA 90 bp ATGGTAACACAATATCGCTGGGGAAGAAAGCCGCAGCTTTCGCAGTaGGAAGGTTCTAGGGCTCAAGGTCAAGTCTTCTGGATCCCTGCA +
Preference number: 5 (lower is better)
Translates to: MVTQYRWGRKPQLSQ*EGSRAQGQVFWIPA
Trigger: TGCAGGGATCCAGAAGACTTGACCTTGAGCCCTAGAACCTTCTCACTGCGAAAGCTGCGGCTTTCTTCCCCAGCGATATTGTGTTACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS GCA 90 bp GCGAGGCCCAGAAGCTCAGTCAGGTCCACACCTTACCCTGAGCATTaGTTCCACTGGCTGTTCCTGAGTTGTATCCTTGATAAAACAACT +
Preference number: 5 (lower is better)
Translates to: ARPRSSVRSTPYPEH*FHWLFLSCILDKTT
Trigger: AGTTGTTTTATCAAGGATACAACTCAGGAACAGCCAGTGGAAGCAATGCTCAGGGTAAGGTGTGGACCTGACTGAGCTTCTGGGCCTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS GCA 90 bp CAGCCACGCAGGGCGACAGAGAGAACAGGCACGTCTTTAATTAACTaGCATTCAGTTACGATTCTTCTTGGAGTGGAGGGAAAACAGATC +
Preference number: 5 (lower is better)
Translates to: QPRRATERTGTSLIN*HSVTILLGVEGKQI
Trigger: GATCTGTTTTCCCTCCACTCCAAGAAGAATCGTAACTGAATGGCAGTTAATTAAAGACGTGCCTGTTCTCTCTGTCGCCCTGCGTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS-3UTR CAA 90 bp AACACTGCGGGAATCCTGGAGAAACGAAGTAATTCACAAAGGTTTTCAGAAAAGCTGGACCCATCGCTGTaGTCAGTTGCTGGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: NTAGILEKRSNSQRFSEKLDPSL*SVAGAS
Trigger: GGAGGCACCAGCAACTGACAACAGCGATGGGTCCAG...CTTTTCTGAAAACCTTTGTGAATTACTTCGTTTCTCCAGGATTCCCGCAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CAA 90 bp GGACAGAGTAAGGAATTCCTCAACACTGCGGGAATCCTGGAGAAACGAAGTAATTCTTGGTCTTCCCTGTaGTCTTCAGAACTGGACCCA +
Preference number: 5 (lower is better)
Translates to: GQSKEFLNTAGILEKRSNSWSSL*SSELDP
Trigger: TGGGTCCAGTTCTGAAGACAACAGGGAAGACCAAGA...ATTACTTCGTTTCTCCAGGATTCCCGCAGTGTTGAGGAATTCCTTACTCTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CAA 90 bp TTCCTCAACACTGCGGGAATCCTGGAGAAACGAAGTAATTCACAAAGGTTTTCAATCGGTGGAGGCTCCTaGTCTTCTTTGTCTCCATCC +
Preference number: 5 (lower is better)
Translates to: FLNTAGILEKRSNSQRFSIGGGS*SSLSPS
Trigger: GGATGGAGACAAAGAAGACAAGGAGCCTCCACCGAT...TGAAAACCTTTGTGAATTACTTCGTTTCTCCAGGATTCCCGCAGTGTTGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS CCA 90 bp AGAAGCTCAGTCAGGTCCACACCTTACCCTGAGCATTGCTTCCACTaGCTGTTCCTGAGTTGTATCCTTGATAAAACAACTGTAATCCTA +
Preference number: 5 (lower is better)
Translates to: RSSVRSTPYPEHCFH*LFLSCILDKTTVIL
Trigger: TAGGATTACAGTTGTTTTATCAAGGATACAACTCAGGAACAGCCAGTGGAAGCAATGCTCAGGGTAAGGTGTGGACCTGACTGAGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS TCA 90 bp CATTCAGTTACGATTCTTCTTGGAGTGGAGGGAAAACAGATCTTTTaGAGCATAAGGCATGCTACACTTTCTTCAGCCACTGCCTTTCGC +
Preference number: 5 (lower is better)
Translates to: HSVTILLGVEGKQIF*SIRHATLSSATAFR
Trigger: GCGAAAGGCAGTGGCTGAAGAAAGTGTAGCATGCCTTATGCTTCAAAAGATCTGTTTTCCCTCCACTCCAAGAAGAATCGTAACTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS GCA 90 bp TCTTCTTGGAGTGGAGGGAAAACAGATCTTTTGAAGCATAAGGCATaGTACACTTTCTTCAGCCACTGCCTTTCGCTGATAGACATGCAA +
Preference number: 5 (lower is better)
Translates to: SSWSGGKTDLLKHKA*YTFFSHCLSLIDMQ
Trigger: TTGCATGTCTATCAGCGAAAGGCAGTGGCTGAAGAAAGTGTAGCATGCCTTATGCTTCAAAAGATCTGTTTTCCCTCCACTCCAAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS-3UTR CAA 90 bp AAGTTTTCGCCAATCGTCTTAGGTGATGACACAAATGCCTTGAGATTGTTACAGCAGAGACACAGCTACTaGATTTGCCAGCAAACGAGG +
Preference number: 5 (lower is better)
Translates to: KFSPIVLGDDTNALRLLQQRHSY*ICQQTR
Trigger: CCTCGTTTGCTGGCAAATCAAGTAGCTGTGTCTCTG...CTGTAACAATCTCAAGGCATTTGTGTCATCACCTAAGACGATTGGCGAAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CAA 90 bp TTAAAACAATTAAGGGATCGACGTATCACGGTGATTAGAAATGCATCAAACTCTCTTTGTCCTCTCTCTTaGCCTCCTCTGGCTTGGGAC +
Preference number: 5 (lower is better)
Translates to: LKQLRDRRITVIRNASNSLCPLS*PPLAWD
Trigger: GTCCCAAGCCAGAGGAGGCAAAGAGAGAGGACAAAG...AGAGTTTGATGCATTTCTAATCACCGTGATACGTCGATCCCTTAATTGTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS-3UTR CAA 90 bp TTAAAACAATTAAGGGATCGACGTATCACGGTGATTAGAAATGCATCAAACTCTTCGGTCCGGTTCCTCTaGGTTTTCACATCTTGGTCT +
Preference number: 5 (lower is better)
Translates to: LKQLRDRRITVIRNASNSSVRFL*VFTSWS
Trigger: AGACCAAGATGTGAAAACCAAGAGGAACCGGACCGA...AGAGTTTGATGCATTTCTAATCACCGTGATACGTCGATCCCTTAATTGTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS CCA 90 bp TCCCGTCAGATTATAATATCAAATTTTACTCTACCTTCTCACATTTaGATGTGTTTAGACACACACATCCCTACCACTGTGTCACAACTG +
Preference number: 5 (lower is better)
Translates to: SRQIIISNFTLPSHI*MCLDTHIPTTVSQL
Trigger: CAGTTGTGACACAGTGGTAGGGATGTGTGTGTCTAAACACATCCAAATGTGAGAAGGTAGAGTAAAATTTGATATTATAATCTGACGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS-3UTR CAA 90 bp TTAAAACAATTAAGGGATCGACGTATCACGGTGATTAGAAATGCATCAAACTCTCTGGTCCTTTCTTTTTaGAACAAGTCGGAACCTCTG +
Preference number: 5 (lower is better)
Translates to: LKQLRDRRITVIRNASNSLVLSF*NKSEPL
Trigger: CAGAGGTTCCGACTTGTTCAAAAAAGAAAGGACCAG...AGAGTTTGATGCATTTCTAATCACCGTGATACGTCGATCCCTTAATTGTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS GCA 72 bp CAGAGGAGAGGCTGCCGCCGCCGGGGCTGCTGCTGCTaGAGCTGCCGCCGCCGCCGCTGGAACCTGGCGCCC +
Preference number: 6 (lower is better)
Translates to: QRRGCRRRGCCC*SCRRRRWNLAP
Trigger: GGGCGCCAGGTTCCAGCGGCGGCGGCGGCAGCTGCAGCAGCAGCAGCCCCGGCGGCGGCAGCCTCTCCTCTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS GCA 72 bp GGCCAGAGGAGAGGCTGCCGCCGCCGGGGCTGCTGCTaGTGCAGCTGCCGCCGCCGCCGCTGGAACCTGGCG +
Preference number: 6 (lower is better)
Translates to: GQRRGCRRRGCC*CSCRRRRWNLA
Trigger: CGCCAGGTTCCAGCGGCGGCGGCGGCAGCTGCAGCAGCAGCAGCCCCGGCGGCGGCAGCCTCTCCTCTGGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS GCA 72 bp CACCATCCAGACCCAGGGCGGCGGCGGCGGCGGCTCTaGGTCCATCGGCCAGAGGAGAGGCTGCCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: HHPDPGRRRRRL*VHRPEERLPPP
Trigger: CGGCGGCGGCAGCCTCTCCTCTGGCCGATGGACGCAGAGCCGCCGCCGCCGCCGCCCTGGGTCTGGATGGTG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS GCA 72 bp ATCGGCCAGAGGAGAGGCTGCCGCCGCCGGGGCTGCTaGTGCTGCAGCTGCCGCCGCCGCCGCTGGAACCTG +
Preference number: 6 (lower is better)
Translates to: IGQRRGCRRRGC*CCSCRRRRWNL
Trigger: CAGGTTCCAGCGGCGGCGGCGGCAGCTGCAGCAGCAGCAGCCCCGGCGGCGGCAGCCTCTCCTCTGGCCGAT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS GCA 72 bp TCCATCGGCCAGAGGAGAGGCTGCCGCCGCCGGGGCTaGTGCTGCTGCAGCTGCCGCCGCCGCCGCTGGAAC +
Preference number: 6 (lower is better)
Translates to: SIGQRRGCRRRG*CCCSCRRRRWN
Trigger: GTTCCAGCGGCGGCGGCGGCAGCTGCAGCAGCAGCAGCCCCGGCGGCGGCAGCCTCTCCTCTGGCCGATGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS CCA 72 bp TGGGTGCCAAGGTCAGGAAGTGGCGCGGCTGCACGCTaGAGGGGGACGGGCCCCGGAGGTTCTCAGGGTCCA +
Preference number: 6 (lower is better)
Translates to: WVPRSGSGAAAR*RGTGPGGSQGP
Trigger: TGGACCCTGAGAACCTCCGGGGCCCGTCCCCCTCCAGCGTGCAGCCGCGCCACTTCCTGACCTTGGCACCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS CCA 72 bp ACACCAGGGGGATCCGGGCACCGGGGTGGAGGCCACTaGCCTGTTGCCTCTGGCTGTGCTGTCCTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: TPGGSGHRGGGH*PVASGCAVLSS
Trigger: GGAGGAGAGGACAGCACAGCCAGAGGCAACAGGCCAGTGGCCTCCACCCCGGTGCCCGGATCCCCCTGGTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368642.4
ENST00000483040.1
CDS GCA 72 bp AGCAGGCCCAGTCAGCAGGGATGTGCTCACTCGCTATaGAAGGCTGGTGGGGGCCCTGCGCTCCTTAGCCGG +
Preference number: 6 (lower is better)
Translates to: SRPSQQGCAHSL*KAGGGPALLSR
Trigger: CCGGCTAAGGAGCGCAGGGCCCCCACCAGCCTTGCATAGCGAGTGAGCACATCCCTGCTGACTGGGCCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS GCA 72 bp CCTGGGAGCCACGGTCTACACCATGCAGCCCAGGCGTaGAGGAGGCTGTGCCACCAGGCCTGTGTGAGCACA +
Preference number: 6 (lower is better)
Translates to: PGSHGLHHAAQA*RRLCHQACVST
Trigger: TGTGCTCACACAGGCCTGGTGGCACAGCCTCCTGCACGCCTGGGCTGCATGGTGTAGACCGTGGCTCCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CCA 72 bp TGGGCTGAGGTGCTAACACCACCGTGGGGAGCGGCCTaGAGGCAGGAGCCGGCCTGGACAGAGACACAGCTA +
Preference number: 6 (lower is better)
Translates to: WAEVLTPPWGAA*RQEPAWTETQL
Trigger: TAGCTGTGTCTCTGTCCAGGCCGGCTCCTGCCTCCAGGCCGCTCCCCACGGTGGTGTTAGCACCTCAGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS CCA 72 bp GGCTCCTTGTCTTCTTTGTCTCCATCCCGGCTCTTCTaGGCCCGCAGCATCAGGGCAGGAGGGCGGGCCACT +
Preference number: 6 (lower is better)
Translates to: GSLSSLSPSRLF*ARSIRAGGRAT
Trigger: AGTGGCCCGCCCTCCTGCCCTGATGCTGCGGGCCCAGAAGAGCCGGGATGGAGACAAAGAAGACAAGGAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS GCA 72 bp GGTCTACACCATGCAGCCCAGGCGTGCAGGAGGCTGTaGCACCAGGCCTGTGTGAGCACACCCTGTGATGTG +
Preference number: 6 (lower is better)
Translates to: GLHHAAQACRRL*HQACVSTPCDV
Trigger: CACATCACAGGGTGTGCTCACACAGGCCTGGTGGCACAGCCTCCTGCACGCCTGGGCTGCATGGTGTAGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CCA 72 bp CCACCGTGGGGAGCGGCCTGGAGGCAGGAGCCGGCCTaGACAGAGACACAGCTACTTGATTTGCCAGCAAAC +
Preference number: 6 (lower is better)
Translates to: PPWGAAWRQEPA*TETQLLDLPAN
Trigger: GTTTGCTGGCAAATCAAGTAGCTGTGTCTCTGTCCAGGCCGGCTCCTGCCTCCAGGCCGCTCCCCACGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS CAA 90 bp CGCTCTGTCCTTGTATCTGAGACGGGGGACGTCCGGAGGGGTATTTaGATGGGTGCCAAGGTCAGGAAGTGGCGCGGCTGCACGCTGGAG +
Preference number: 6 (lower is better)
Translates to: RSVLVSETGDVRRGI*MGAKVRKWRGCTLE
Trigger: CTCCAGCGTGCAGCCGCGCCACTTCCTGACCTTGGCACCCATCAAAATACCCCTCCGGACGTCCCCCGTCTCAGATACAAGGACAGAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368642.4
ENST00000483040.1
CDS CCA 72 bp AGACTCTTGTCTTCTTTGTCTCCATCCCGGCTCTTCTaGGCCCGCAGCATCAGGGCAGGAGGGCGGGCCACT +
Preference number: 6 (lower is better)
Translates to: RLLSSLSPSRLF*ARSIRAGGRAT
Trigger: AGTGGCCCGCCCTCCTGCCCTGATGCTGCGGGCCCAGAAGAGCCGGGATGGAGACAAAGAAGACAAGAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CAA 90 bp GGTGCCTCCAGCTTGCGTTTGTGGGGCGGGTCCTCAATGATCCTGTaGAGGTCTCCGCGGTCCTTCAGGTCCATGGGCTTCTCCCAGACA +
Preference number: 6 (lower is better)
Translates to: GASSLRLWGGSSMIL*RSPRSFRSMGFSQT
Trigger: TGTCTGGGAGAAGCCCATGGACCTGAAGGACCGCGGAGACCTCAACAGGATCATTGAGGACCCGCCCCACAAACGCAAGCTGGAGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368642.4
ENST00000483040.1
CDS CAA 90 bp CTGGACCCATCGCTGTTGTCAGTTGCTGGTGCCTCCAGCTTGCGTTaGTGGGGCGGGTCCTCAATGATCCTGTTGAGGTCTCCGCGGTCC +
Preference number: 6 (lower is better)
Translates to: LDPSLLSVAGASSLR*WGGSSMILLRSPRS
Trigger: GGACCGCGGAGACCTCAACAGGATCATTGAGGACCCGCCCCACAAACGCAAGCTGGAGGCACCAGCAACTGACAACAGCGATGGGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368642.4
ENST00000483040.1
CDS TCA 72 bp CCCAGGCGTGCAGGAGGCTGTGCCACCAGGCCTGTGTaGGCACACCCTGTGATGTGCATAAAAGGATGTCGG +
Preference number: 6 (lower is better)
Translates to: PRRAGGCATRPV*AHPVMCIKGCR
Trigger: CCGACATCCTTTTATGCACATCACAGGGTGTGCTCACACAGGCCTGGTGGCACAGCCTCCTGCACGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CAA 72 bp CTTGTATCTGAGACGGGGGACGTCCGGAGGGGTATTTaGATGGGTGCCAAGGTCAGGAAGTGGCGCGGCTGC +
Preference number: 6 (lower is better)
Translates to: LVSETGDVRRGI*MGAKVRKWRGC
Trigger: GCAGCCGCGCCACTTCCTGACCTTGGCACCCATCAAAATACCCCTCCGGACGTCCCCCGTCTCAGATACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368642.4
ENST00000483040.1
CDS CAA 90 bp GGCGGCGTCCTTGTGCCTTTGTCCTCTCTCTTTGCCTCCTCTGGCTaGGGACTCCCGCAGCCTTCGGTCCGGTTCCTCTTGGTTTTCACA +
Preference number: 6 (lower is better)
Translates to: GGVLVPLSSLFASSG*GLPQPSVRFLLVFT
Trigger: TGTGAAAACCAAGAGGAACCGGACCGAAGGCTGCGGGAGTCCCAAGCCAGAGGAGGCAAAGAGAGAGGACAAAGGCACAAGGACGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368642.4
ENST00000483040.1
CDS TCA 72 bp TCTAAAACATTGAGGTTCAGAGTGCTTCCAGGCTGGTaGACGCTGCAGCACTGGGAGGGTGGCGCCGGCGAG +
Preference number: 6 (lower is better)
Translates to: SKTLRFRVLPGW*TLQHWEGGAGE
Trigger: CTCGCCGGCGCCACCCTCCCAGTGCTGCAGCGTTCACCAGCCTGGAAGCACTCTGAACCTCAATGTTTTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS TCA 72 bp ACAGGGTCTTGGGGAACGTTTCCCCATCCTGCAGCGTaGTATGCGGCAGTGTGCCTGCCTTGGAGACACTGG +
Preference number: 6 (lower is better)
Translates to: TGSWGTFPHPAA*YAAVCLPWRHW
Trigger: CCAGTGTCTCCAAGGCAGGCACACTGCCGCATATCACGCTGCAGGATGGGGAAACGTTCCCCAAGACCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS GCA 72 bp GGATTCCACAGGGTCTTGGGGAACGTTTCCCCATCCTaGAGCGTGATATGCGGCAGTGTGCCTGCCTTGGAG +
Preference number: 6 (lower is better)
Translates to: GFHRVLGNVSPS*SVICGSVPALE
Trigger: CTCCAAGGCAGGCACACTGCCGCATATCACGCTGCAGGATGGGGAAACGTTCCCCAAGACCCTGTGGAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CCA 72 bp CCCAATAGGGGTTGCAAGAGCAGAAGGGCAGAGATGTaGGAAGACGGGCACCAGCTCCACTGTGGAAGAGGG +
Preference number: 6 (lower is better)
Translates to: PNRGCKSRRAEM*EDGHQLHCGRG
Trigger: CCCTCTTCCACAGTGGAGCTGGTGCCCGTCTTCCCACATCTCTGCCCTTCTGCTCTTGCAACCCCTATTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS CCA 72 bp GGCACTCCCAGGGTACAGAGGAGCTTTAGCTACAAATaGAAGGCTGGAGGCACCAGGAGCCTGCCACCGACA +
Preference number: 6 (lower is better)
Translates to: GTPRVQRSFSYK*KAGGTRSLPPT
Trigger: TGTCGGTGGCAGGCTCCTGGTGCCTCCAGCCTTCCATTTGTAGCTAAAGCTCCTCTGTACCCTGGGAGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CCA 72 bp AAGTCTTCTGGATCCCTGCAACGCCCCAGGGGAGCTTaGCGGAAGCTGTGTGAGGATTCCACAGGGTCTTGG +
Preference number: 6 (lower is better)
Translates to: KSSGSLQRPRGA*RKLCEDSTGSW
Trigger: CCAAGACCCTGTGGAATCCTCACACAGCTTCCGCCAAGCTCCCCTGGGGCGTTGCAGGGATCCAGAAGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CAA 72 bp AGCTTGCGTTTGTGGGGCGGGTCCTCAATGATCCTGTaGAGGTCTCCGCGGTCCTTCAGGTCCATGGGCTTC +
Preference number: 6 (lower is better)
Translates to: SLRLWGGSSMIL*RSPRSFRSMGF
Trigger: GAAGCCCATGGACCTGAAGGACCGCGGAGACCTCAACAGGATCATTGAGGACCCGCCCCACAAACGCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368642.4
ENST00000483040.1
CDS GCA 72 bp GTCTTGGGGAACGTTTCCCCATCCTGCAGCGTGATATaGGGCAGTGTGCCTGCCTTGGAGACACTGGAGAGT +
Preference number: 6 (lower is better)
Translates to: VLGNVSPSCSVI*GSVPALETLES
Trigger: ACTCTCCAGTGTCTCCAAGGCAGGCACACTGCCGCATATCACGCTGCAGGATGGGGAAACGTTCCCCAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS GCA 72 bp GATTCATCGGCAAAGACCCACGCCGAGGGAGGGGAGTaGAGCAGCCAGGGAACCGTTTTCATTTGCTGGATC +
Preference number: 6 (lower is better)
Translates to: DSSAKTHAEGGE*SSQGTVFICWI
Trigger: GATCCAGCAAATGAAAACGGTTCCCTGGCTGCTGCACTCCCCTCCCTCGGCGTGGGTCTTTGCCGATGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CCA 72 bp CTGTTGTCAGTTGCTGGTGCCTCCAGCTTGCGTTTGTaGGGCGGGTCCTCAATGATCCTGTTGAGGTCTCCG +
Preference number: 6 (lower is better)
Translates to: LLSVAGASSLRL*GGSSMILLRSP
Trigger: CGGAGACCTCAACAGGATCATTGAGGACCCGCCCCACAAACGCAAGCTGGAGGCACCAGCAACTGACAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368642.4
ENST00000483040.1
CDS CAA 72 bp GACCCATCGCTGTTGTCAGTTGCTGGTGCCTCCAGCTaGCGTTTGTGGGGCGGGTCCTCAATGATCCTGTTG +
Preference number: 6 (lower is better)
Translates to: DPSLLSVAGASS*RLWGGSSMILL
Trigger: CAACAGGATCATTGAGGACCCGCCCCACAAACGCAAGCTGGAGGCACCAGCAACTGACAACAGCGATGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368642.4
ENST00000483040.1
CDS CAA 90 bp GACACTGACCATGGCATAGAAGCCAGGGGTGCCAGTCTGTCCAGATaGGAGCCAAGTTCACCCGAATCATCAGAGGACCAGGGCATGGCA +
Preference number: 6 (lower is better)
Translates to: DTDHGIEARGASLSR*EPSSPESSEDQGMA
Trigger: TGCCATGCCCTGGTCCTCTGATGATTCGGGTGAACTTGGCTCCAATCTGGACAGACTGGCACCCCTGGCTTCTATGCCATGGTCAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS TCA 72 bp GAGGCAGGAGCCGGCCTGGACAGAGACACAGCTACTTaGTTTGCCAGCAAACGAGGCTTTTCATGCCCATGG +
Preference number: 6 (lower is better)
Translates to: EAGAGLDRDTAT*FASKRGFSCPW
Trigger: CCATGGGCATGAAAAGCCTCGTTTGCTGGCAAATCAAGTAGCTGTGTCTCTGTCCAGGCCGGCTCCTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS GCA 72 bp ATCGCCCGTCCAGACCACACACTCAAAGAAGACCGATaGGTCCTCCCTCAGCTTAGCGAGTGCAACTGCAAG +
Preference number: 6 (lower is better)
Translates to: IARPDHTLKEDR*VLPQLSECNCK
Trigger: CTTGCAGTTGCACTCGCTAAGCTGAGGGAGGACGCATCGGTCTTCTTTGAGTGTGTGGTCTGGACGGGCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CAA 72 bp GGAGGCAGGAGCCGGCCTGGACAGAGACACAGCTACTaGATTTGCCAGCAAACGAGGCTTTTCATGCCCATG +
Preference number: 6 (lower is better)
Translates to: GGRSRPGQRHSY*ICQQTRLFMPM
Trigger: CATGGGCATGAAAAGCCTCGTTTGCTGGCAAATCAAGTAGCTGTGTCTCTGTCCAGGCCGGCTCCTGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS CAA 72 bp TCGCTGTTGTCAGTTGCTGGTGCCTCCAGCTTGCGTTaGTGGGGCGGGTCCTCAATGATCCTGTTGAGGTCT +
Preference number: 6 (lower is better)
Translates to: SLLSVAGASSLR*WGGSSMILLRS
Trigger: AGACCTCAACAGGATCATTGAGGACCCGCCCCACAAACGCAAGCTGGAGGCACCAGCAACTGACAACAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368642.4
ENST00000483040.1
CDS CAA 72 bp TGCGGCAGTGTGCCTGCCTTGGAGACACTGGAGAGTTaGCCTGTAGAAGCTCTCAACCAGTTCGTGGCATCG +
Preference number: 6 (lower is better)
Translates to: CGSVPALETLES*PVEALNQFVAS
Trigger: CGATGCCACGAACTGGTTGAGAGCTTCTACAGGCAAACTCTCCAGTGTCTCCAAGGCAGGCACACTGCCGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CAA 72 bp CCATCCTGCAGCGTGATATGCGGCAGTGTGCCTGCCTaGGAGACACTGGAGAGTTTGCCTGTAGAAGCTCTC +
Preference number: 6 (lower is better)
Translates to: PSCSVICGSVPA*ETLESLPVEAL
Trigger: GAGAGCTTCTACAGGCAAACTCTCCAGTGTCTCCAAGGCAGGCACACTGCCGCATATCACGCTGCAGGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CAA 90 bp TTCAGGTCCATGGGCTTCTCCCAGACAGACAGGTGCATCGTTGGGTaGAAGAAGAAAACTCGGTCATCGCCCGTCCAGACCACACACCAG +
Preference number: 6 (lower is better)
Translates to: FRSMGFSQTDRCIVG*KKKTRSSPVQTTHQ
Trigger: CTGGTGTGTGGTCTGGACGGGCGATGACCGAGTTTTCTTCTTCAACCCAACGATGCACCTGTCTGTCTGGGAGAAGCCCATGGACCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS CAA 90 bp GGGACTCCCGCAGCCTTCGGTCCGGTTCCTCTTGGTTTTCACATCTaGGTCTTCCCTGTTGTCTTCAGAACTGGACCCATCGCTGTTGTC +
Preference number: 6 (lower is better)
Translates to: GTPAAFGPVPLGFHI*VFPVVFRTGPIAVV
Trigger: GACAACAGCGATGGGTCCAGTTCTGAAGACAACAGGGAAGACCAAGATGTGAAAACCAAGAGGAACCGGACCGAAGGCTGCGGGAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368642.4
ENST00000483040.1
CDS TCA 72 bp TGGGCTTCTCCCAGACAGACAGGTGCATCGTTGGGTTaGAGAAGAAAACTCGGTCATCGCCCGTCCAGACCA +
Preference number: 6 (lower is better)
Translates to: WASPRQTGASLG*RRKLGHRPSRP
Trigger: TGGTCTGGACGGGCGATGACCGAGTTTTCTTCTTCAACCCAACGATGCACCTGTCTGTCTGGGAGAAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368642.4
ENST00000483040.1
CDS GCA 72 bp GGAGGGGAGTGCAGCAGCCAGGGAACCGTTTTCATTTaGTGGATCGCACGAAGCCTTGCTCATGGTAACACA +
Preference number: 6 (lower is better)
Translates to: GGECSSQGTVFI*WIARSLAHGNT
Trigger: TGTGTTACCATGAGCAAGGCTTCGTGCGATCCAGCAAATGAAAACGGTTCCCTGGCTGCTGCACTCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS GCA 72 bp AAAGAAGACCGATGCGTCCTCCCTCAGCTTAGCGAGTaGAACTGCAAGTCAGAGGACGGTGCACGGGAGAAA +
Preference number: 6 (lower is better)
Translates to: KEDRCVLPQLSE*NCKSEDGAREK
Trigger: TTTCTCCCGTGCACCGTCCTCTGACTTGCAGTTGCACTCGCTAAGCTGAGGGAGGACGCATCGGTCTTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CAA 72 bp ATGGGCTTCTCCCAGACAGACAGGTGCATCGTTGGGTaGAAGAAGAAAACTCGGTCATCGCCCGTCCAGACC +
Preference number: 6 (lower is better)
Translates to: MGFSQTDRCIVG*KKKTRSSPVQT
Trigger: GGTCTGGACGGGCGATGACCGAGTTTTCTTCTTCAACCCAACGATGCACCTGTCTGTCTGGGAGAAGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368642.4
ENST00000483040.1
CDS CAA 72 bp CATGGCATAGAAGCCAGGGGTGCCAGTCTGTCCAGATaGGAGCCAAGTTCACCCGAATCATCAGAGGACCAG +
Preference number: 6 (lower is better)
Translates to: HGIEARGASLSR*EPSSPESSEDQ
Trigger: CTGGTCCTCTGATGATTCGGGTGAACTTGGCTCCAATCTGGACAGACTGGCACCCCTGGCTTCTATGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CAA 90 bp AACGTTTCCCCATCCTGCAGCGTGATATGCGGCAGTGTGCCTGCCTaGGAGACACTGGAGAGTTTGCCTGTAGAAGCTCTCAACCAGTTC +
Preference number: 6 (lower is better)
Translates to: NVSPSCSVICGSVPA*ETLESLPVEALNQF
Trigger: GAACTGGTTGAGAGCTTCTACAGGCAAACTCTCCAGTGTCTCCAAGGCAGGCACACTGCCGCATATCACGCTGCAGGATGGGGAAACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CAA 90 bp TTCAGGTCCATGGGCTTCTCCCAGACAGACAGGTGCATCGTTGGGTaGAAGAAGAAAACTCGGTCATCGCCCGTCCAGACCACACACTCA +
Preference number: 6 (lower is better)
Translates to: FRSMGFSQTDRCIVG*KKKTRSSPVQTTHS
Trigger: TGAGTGTGTGGTCTGGACGGGCGATGACCGAGTTTTCTTCTTCAACCCAACGATGCACCTGTCTGTCTGGGAGAAGCCCATGGACCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CCA 72 bp AAAACCAAAAACTGTAGCTCCCTCGTGGAGGGTGTCTaGAGTGTGGCATATTCCGAGAGCAAGCAGCCACGC +
Preference number: 6 (lower is better)
Translates to: KTKNCSSLVEGV*SVAYSESKQPR
Trigger: GCGTGGCTGCTTGCTCTCGGAATATGCCACACTCCAGACACCCTCCACGAGGGAGCTACAGTTTTTGGTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CAA 90 bp CCTTCGGTCCGGTTCCTCTTGGTTTTCACATCTTGGTCTTCCCTGTaGTCTTCAGAACTGGACCCATCGCTGTTGTCAGTTGCTGGTGCC +
Preference number: 6 (lower is better)
Translates to: PSVRFLLVFTSWSSL*SSELDPSLLSVAGA
Trigger: GGCACCAGCAACTGACAACAGCGATGGGTCCAGTTCTGAAGACAACAGGGAAGACCAAGATGTGAAAACCAAGAGGAACCGGACCGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368642.4
ENST00000483040.1
CDS TCA 72 bp CAATATCGCTGGGGAAGAAAGCCGCAGCTTTCGCAGTaGGAAGGTTCTAGGGCTCAAGGTCAAGTCTTCTGG +
Preference number: 6 (lower is better)
Translates to: QYRWGRKPQLSQ*EGSRAQGQVFW
Trigger: CCAGAAGACTTGACCTTGAGCCCTAGAACCTTCTCACTGCGAAAGCTGCGGCTTTCTTCCCCAGCGATATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CCA 72 bp AGTTCTGTGAGTGGTCCTAGCAAATCACCACTGAAGTaGAGAGGAGGTCATGGGAACCCCAGATCTGTGGTC +
Preference number: 6 (lower is better)
Translates to: SSVSGPSKSPLK*RGGHGNPRSVV
Trigger: GACCACAGATCTGGGGTTCCCATGACCTCCTCTCCACTTCAGTGGTGATTTGCTAGGACCACTCACAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CCA 72 bp GGGGAGTGCAGCAGCCAGGGAACCGTTTTCATTTGCTaGATCGCACGAAGCCTTGCTCATGGTAACACAATA +
Preference number: 6 (lower is better)
Translates to: GECSSQGTVFIC*IARSLAHGNTI
Trigger: TATTGTGTTACCATGAGCAAGGCTTCGTGCGATCCAGCAAATGAAAACGGTTCCCTGGCTGCTGCACTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CAA 72 bp CAGGAGCCGGCCTGGACAGAGACACAGCTACTTGATTaGCCAGCAAACGAGGCTTTTCATGCCCATGGAAAA +
Preference number: 6 (lower is better)
Translates to: QEPAWTETQLLD*PANEAFHAHGK
Trigger: TTTTCCATGGGCATGAAAAGCCTCGTTTGCTGGCAAATCAAGTAGCTGTGTCTCTGTCCAGGCCGGCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS CAA 72 bp GCAGCCTTCGGTCCGGTTCCTCTTGGTTTTCACATCTaGGTCTTCCCTGTTGTCTTCAGAACTGGACCCATC +
Preference number: 6 (lower is better)
Translates to: AAFGPVPLGFHI*VFPVVFRTGPI
Trigger: GATGGGTCCAGTTCTGAAGACAACAGGGAAGACCAAGATGTGAAAACCAAGAGGAACCGGACCGAAGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368642.4
ENST00000483040.1
CDS GCA 72 bp AGGAGCCGGCCTGGACAGAGACACAGCTACTTGATTTaGCAGCAAACGAGGCTTTTCATGCCCATGGAAAAA +
Preference number: 6 (lower is better)
Translates to: RSRPGQRHSYLI*QQTRLFMPMEK
Trigger: TTTTTCCATGGGCATGAAAAGCCTCGTTTGCTGGCAAATCAAGTAGCTGTGTCTCTGTCCAGGCCGGCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS GCA 72 bp AGAAGCTCAGTCAGGTCCACACCTTACCCTGAGCATTaGTTCCACTGGCTGTTCCTGAGTTGTATCCTTGAT +
Preference number: 6 (lower is better)
Translates to: RSSVRSTPYPEH*FHWLFLSCILD
Trigger: ATCAAGGATACAACTCAGGAACAGCCAGTGGAAGCAATGCTCAGGGTAAGGTGTGGACCTGACTGAGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CAA 72 bp CCAGCAAACGAGGCTTTTCATGCCCATGGAAAAACCTaGACTCCTCAGGATGTATCCACGTTGAGTCCAGAG +
Preference number: 6 (lower is better)
Translates to: PANEAFHAHGKT*TPQDVSTLSPE
Trigger: CTCTGGACTCAACGTGGATACATCCTGAGGAGTCAAGGTTTTTCCATGGGCATGAAAAGCCTCGTTTGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS CAA 90 bp CTTGATTTGCCAGCAAACGAGGCTTTTCATGCCCATGGAAAAACCTaGACTCCTCAGGATGTATCCACGTTGAGTCCAGAGCAAAGGAAT +
Preference number: 6 (lower is better)
Translates to: LDLPANEAFHAHGKT*TPQDVSTLSPEQRN
Trigger: ATTCCTTTGCTCTGGACTCAACGTGGATACATCCTGAGGAGTCAAGGTTTTTCCATGGGCATGAAAAGCCTCGTTTGCTGGCAAATCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368642.4
CDS GCA 72 bp AGGGCGACAGAGAGAACAGGCACGTCTTTAATTAACTaGCATTCAGTTACGATTCTTCTTGGAGTGGAGGGA +
Preference number: 6 (lower is better)
Translates to: RATERTGTSLIN*HSVTILLGVEG
Trigger: TCCCTCCACTCCAAGAAGAATCGTAACTGAATGGCAGTTAATTAAAGACGTGCCTGTTCTCTCTGTCGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CCA 72 bp GTCAGGTCCACACCTTACCCTGAGCATTGCTTCCACTaGCTGTTCCTGAGTTGTATCCTTGATAAAACAACT +
Preference number: 6 (lower is better)
Translates to: VRSTPYPEHCFH*LFLSCILDKTT
Trigger: AGTTGTTTTATCAAGGATACAACTCAGGAACAGCCAGTGGAAGCAATGCTCAGGGTAAGGTGTGGACCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS TCA 72 bp GCCGGCTGCCTTCTGTACCTGGCTGGCACATTGAGCTaGCACAAGTGGTTGTTATTTCTGTTCTTTAAATTA +
Preference number: 6 (lower is better)
Translates to: AGCLLYLAGTLS*HKWLLFLFFKL
Trigger: TAATTTAAAGAACAGAAATAACAACCACTTGTGTCAGCTCAATGTGCCAGCCAGGTACAGAAGGCAGCCGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CAA 90 bp CCATTCAGTTACGATTCTTCTTGGAGTGGAGGGAAAACAGATCTTTaGAAGCATAAGGCATGCTACACTTTCTTCAGCCACTGCCTTTCG +
Preference number: 6 (lower is better)
Translates to: PFSYDSSWSGGKTDL*KHKACYTFFSHCLS
Trigger: CGAAAGGCAGTGGCTGAAGAAAGTGTAGCATGCCTTATGCTTCAAAAGATCTGTTTTCCCTCCACTCCAAGAAGAATCGTAACTGAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS TCA 72 bp CATCGTAAAATGTATATGCAGTCATGTGCCGCAGAGTaGCATTTCTCTCAACCATGGACTGACCACACATAC +
Preference number: 6 (lower is better)
Translates to: HRKMYMQSCAAE*HFSQPWTDHTY
Trigger: GTATGTGTGGTCAGTCCATGGTTGAGAGAAATGTCACTCTGCGGCACATGACTGCATATACATTTTACGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS GCA 72 bp AGTGGAGGGAAAACAGATCTTTTGAAGCATAAGGCATaGTACACTTTCTTCAGCCACTGCCTTTCGCTGATA +
Preference number: 6 (lower is better)
Translates to: SGGKTDLLKHKA*YTFFSHCLSLI
Trigger: TATCAGCGAAAGGCAGTGGCTGAAGAAAGTGTAGCATGCCTTATGCTTCAAAAGATCTGTTTTCCCTCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS TCA 72 bp ACGATTCTTCTTGGAGTGGAGGGAAAACAGATCTTTTaGAGCATAAGGCATGCTACACTTTCTTCAGCCACT +
Preference number: 6 (lower is better)
Translates to: TILLGVEGKQIF*SIRHATLSSAT
Trigger: AGTGGCTGAAGAAAGTGTAGCATGCCTTATGCTTCAAAAGATCTGTTTTCCCTCCACTCCAAGAAGAATCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CAA 90 bp ATTAGCTGTGCCTCCCAGCTGTGTACTGCACTCTCATCTTCAGGCTaGAAACTTAATTTTTACTGTAATAACCTTTTATTCTGCTTCCAA +
Preference number: 6 (lower is better)
Translates to: ISCASQLCTALSSSG*KLNFYCNNLLFCFQ
Trigger: TTGGAAGCAGAATAAAAGGTTATTACAGTAAAAATTAAGTTTCAAGCCTGAAGATGAGAGTGCAGTACACAGCTGGGAGGCACAGCTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CAA 90 bp GTCCCGTCAGATTATAATATCAAATTTTACTCTACCTTCTCACATTaGGATGTGTTTAGACACACACATCCCTACCACTGTGTCACAACT +
Preference number: 6 (lower is better)
Translates to: VPSDYNIKFYSTFSH*DVFRHTHPYHCVTT
Trigger: AGTTGTGACACAGTGGTAGGGATGTGTGTGTCTAAACACATCCAAATGTGAGAAGGTAGAGTAAAATTTGATATTATAATCTGACGGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483040.1
CDS CAA 72 bp ACTCATCTCATTTTCCGCAGCCTTAGTCTGTTTTCCTaGTCCCGTTTCTTAAGAATAAGTATGAATTGGTTG +
Preference number: 6 (lower is better)
Translates to: THLIFRSLSLFS*SRFLRISMNWL
Trigger: CAACCAATTCATACTTATTCTTAAGAAACGGGACAAGGAAAACAGACTAAGGCTGCGGAAAATGAGATGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368642.4
ENST00000483040.1
CDS CAA 72 bp GATTATAATATCAAATTTTACTCTACCTTCTCACATTaGGATGTGTTTAGACACACACATCCCTACCACTGT +
Preference number: 6 (lower is better)
Translates to: DYNIKFYSTFSH*DVFRHTHPYHC
Trigger: ACAGTGGTAGGGATGTGTGTGTCTAAACACATCCAAATGTGAGAAGGTAGAGTAAAATTTGATATTATAATC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483040.1