RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TCERG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000113649

Ensembl transcript IDs: ENST00000296702.9, ENST00000394421.7, ENST00000503741.5, ENST00000506524.5, ENST00000507175.5, ENST00000509787.1, ENST00000509810.5, ENST00000510724.1, ENST00000511077.1, ENST00000513298.5, ENST00000514567.5, ENST00000514719.1, ENST00000515203.5, ENST00000549332.1, ENST00000679501.1, ENST00000679501.2

Found 465 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTAGGAACTGATTCATGGTGTGATGTACACGACATGTTGAAAGAATaGCAAAAAGGCGCAAACCATCATACATTAATACAAAGGACAAAA +
Preference number: 1 (lower is better)
Translates to: LGTDSWCDVHDMLKE*QKGANHHTLIQRTK
Trigger: TTTTGTCCTTTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACATGTCGTGTACATCACACCATGAATCAGTTCCTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000679501.1
3UTR-3UTR GCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACCAGAGGACTTCAGTCTaGGGGGCTGCCAATCCCAGC +
Preference number: 2 (lower is better)
Translates to: INICHNQFTPLLWHTVQYQRTSV*GAANPS
Trigger: GCTGGGATTGGCAGCCCCGCAGACTGAAGTCCTCTG...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549332.1
3UTR-3UTR TCA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCGATCTGTTCTGTGGATaGACAGAGGACTTCAGTCTG +
Preference number: 2 (lower is better)
Translates to: RSSTYATISLRLSSGTQSDLFCG*TEDFSL
Trigger: CAGACTGAAGTCCTCTGTTCATCCACAGAACAGATC...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
3UTR-3UTR TCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACCTCATGCAAGCATTTTaGATAGATGCCCCTATGGAA +
Preference number: 2 (lower is better)
Translates to: INICHNQFTPLLWHTVQYLMQAF*IDAPME
Trigger: TTCCATAGGGGCATCTATTCAAAATGCTTGCATGAG...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549332.1
3UTR-3UTR CCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACTTTGGATCTGTTCTGTaGATGAACAGAGGACTTCAG +
Preference number: 2 (lower is better)
Translates to: INICHNQFTPLLWHTVQYFGSVL*MNRGLQ
Trigger: CTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
3UTR-3UTR GCA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCAGCATTTTGAATAGATaGCCCTATGGAAGAGTATTT +
Preference number: 2 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPISILNR*PYGRVF
Trigger: AAATACTCTTCCATAGGGGCATCTATTCAAAATGCT...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549332.1
3UTR-3UTR CCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGTTGTTGATCGTCTCGTaGGCTCCGATGCTGTGGGAG +
Preference number: 2 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLLLIVS*APMLWE
Trigger: CTCCCACAGCATCGGAGCCCACGAGACGATCAACAA...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549332.1
3UTR-3UTR TCA 90 bp CTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGCTCATGCAAGCATTTTaGATAGATGCCCCTATGGAA +
Preference number: 2 (lower is better)
Translates to: LLLLACINTARKNVTKSLLMQAF*IDAPME
Trigger: TTCCATAGGGGCATCTATTCAAAATGCTTGCATGAG...CAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000679501.1
3UTR-3UTR TCA 90 bp GCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTCTCATGCAAGCATTTTaGATAGATGCCCCTATGGAA +
Preference number: 2 (lower is better)
Translates to: ASGKFKPQMLLLLACINTLMQAF*IDAPME
Trigger: TTCCATAGGGGCATCTATTCAAAATGCTTGCATGAG...AGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000679501.1
3UTR-3UTR TCA 90 bp TTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACCTCATGCAAGCATTTTaGATAGATGCCCCTATGGAA +
Preference number: 2 (lower is better)
Translates to: FKPQMLLLLACINTARKNLMQAF*IDAPME
Trigger: TTCCATAGGGGCATCTATTCAAAATGCTTGCATGAG...GTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000679501.1
3UTR-3UTR GCA 90 bp CAACATGTTAGTTATGACCGTGGTTCCATACCTGAGAAGAAATTACTACATAAAGGAGTCTGTGGTATTTaGATCTGGCAAGTTCAAGCC +
Preference number: 2 (lower is better)
Translates to: QHVSYDRGSIPEKKLLHKGVCGI*IWQVQA
Trigger: GGCTTGAACTTGCCAGATGCAAATACCACAGACTCC...TTTATGTAGTAATTTCTTCTCAGGTATGGAACCACGGTCATAACTAACATGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000679501.1
3UTR-3UTR TCA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACGAGACAGCCTATATTTaGGTATGTATGTCAGTCATG +
Preference number: 2 (lower is better)
Translates to: FASGKFKPQMLLLLACINETAYI*VCMSVM
Trigger: CATGACTGACATACATACTCAAATATAGGCTGTCTC...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000679501.1
3UTR-3UTR TCA 90 bp ATGTTGAAAGAATGCCAAAAAGGCGCAAACCATCATACATTAATACAAAGGACAACGTCACCAAGTCACTaGCTTCCACACCTCATAAAA +
Preference number: 2 (lower is better)
Translates to: MLKECQKGANHHTLIQRTTSPSH*LPHLIK
Trigger: TTTTATGAGGTGTGGAAGTCAGTGACTTGGTGACGT...TGTCCTTTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000679501.1
3UTR-3UTR TCA 90 bp CACTTAATGGTGAATAAAATATGTTTAACCAGTGGTTCTATTCTGGCCAACATGACGTCACCAAGTCACTaGCTTCCACACCTCATAAAA +
Preference number: 2 (lower is better)
Translates to: HLMVNKICLTSGSILANMTSPSH*LPHLIK
Trigger: TTTTATGAGGTGTGGAAGTCAGTGACTTGGTGACGT...CATGTTGGCCAGAATAGAACCACTGGTTAAACATATTTTATTCACCATTAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000679501.1
3UTR-3UTR GCA 90 bp ATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCAAGCATTTTGAATAGATaGCCCTATGGAAGAGTATTT +
Preference number: 2 (lower is better)
Translates to: MLLLLACINTARKNVTKSSILNR*PYGRVF
Trigger: AAATACTCTTCCATAGGGGCATCTATTCAAAATGCT...TGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000679501.1
3UTR-3UTR GCA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGCATTTTGAATAGATaGCCCTATGGAAGAGTATTT +
Preference number: 2 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGSILNR*PYGRVF
Trigger: AAATACTCTTCCATAGGGGCATCTATTCAAAATGCT...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000679501.1
3UTR-3UTR GCA 90 bp CAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGAGCATTTTGAATAGATaGCCCTATGGAAGAGTATTT +
Preference number: 2 (lower is better)
Translates to: QMLLLLACINTARKNVTKSILNR*PYGRVF
Trigger: AAATACTCTTCCATAGGGGCATCTATTCAAAATGCT...CTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000679501.1
3UTR-3UTR TCA 90 bp CACTTAATGGTGAATAAAATATGTTTAACCAGTGGTTCTATTCTGGCCAACATGGAGACAGCCTATATTTaGGTATGTATGTCAGTCATG +
Preference number: 2 (lower is better)
Translates to: HLMVNKICLTSGSILANMETAYI*VCMSVM
Trigger: CATGACTGACATACATACTCAAATATAGGCTGTCTC...CATGTTGGCCAGAATAGAACCACTGGTTAAACATATTTTATTCACCATTAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000679501.1
3UTR-3UTR TCA 90 bp CAGCCTATATTTGAGTATGTATGTCAGTCATGCCACACAAAGAAAAGCATAAATGGTTTCGCAATAGGTTaGCTAATGCACATATATGTA +
Preference number: 2 (lower is better)
Translates to: QPIFEYVCQSCHTKKSINGFAIG*LMHIYV
Trigger: TACATATATGTGCATTAGTCAACCTATTGCGAAACC...ATTTATGCTTTTCTTTGTGTGGCATGACTGACATACATACTCAAATATAGGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000679501.1
3UTR-3UTR GCA 90 bp ATGTTGAAAGAATGCCAAAAAGGCGCAAACCATCATACATTAATACAAAGGACATATGTATGTCAGTCATaGCACACAAAGAAAAGCATA +
Preference number: 2 (lower is better)
Translates to: MLKECQKGANHHTLIQRTYVCQS*HTKKSI
Trigger: TATGCTTTTCTTTGTGTGGCATGACTGACATACATA...TGTCCTTTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000679501.1
3UTR GCA 72 bp TGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTaGGGGGCTGCCAATCCCAGCATCTTTCACAAGCTT +
Preference number: 3 (lower is better)
Translates to: WICSVDEQRTSV*GAANPSIFHKL
Trigger: AAGCTTGTGAAAGATGCTGGGATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549332.1
3UTR-3UTR CAA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACTGGTTTCGCAATAGGTaGACTAATGCACATATATGT +
Preference number: 3 (lower is better)
Translates to: INICHNQFTPLLWHTVQYWFRNR*TNAHIC
Trigger: ACATATATGTGCATTAGTCAACCTATTGCGAAACCA...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
3UTR-3UTR CAA 90 bp GCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTTGGTTTCGCAATAGGTaGACTAATGCACATATATGT +
Preference number: 3 (lower is better)
Translates to: ASGKFKPQMLLLLACINTWFRNR*TNAHIC
Trigger: ACATATATGTGCATTAGTCAACCTATTGCGAAACCA...AGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000679501.1
3UTR-3UTR CAA 90 bp CAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGAGAGACAGCCTATATTaGAGTATGTATGTCAGTCAT +
Preference number: 3 (lower is better)
Translates to: QMLLLLACINTARKNVTKRDSLY*SMYVSH
Trigger: ATGACTGACATACATACTCAAATATAGGCTGTCTCT...CTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000679501.1
3UTR-3UTR CAA 90 bp TTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGACTAGAGACAGCCTATATTaGAGTATGTATGTCAGTCAT +
Preference number: 3 (lower is better)
Translates to: LLLACINTARKNVTKSLTRDSLY*SMYVSH
Trigger: ATGACTGACATACATACTCAAATATAGGCTGTCTCT...AGTCAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000679501.1
3UTR-3UTR CAA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACTGGTTTCGCAATAGGTaGACTAATGCACATATATGT +
Preference number: 3 (lower is better)
Translates to: FASGKFKPQMLLLLACINWFRNR*TNAHIC
Trigger: ACATATATGTGCATTAGTCAACCTATTGCGAAACCA...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000679501.1
3UTR GCA 72 bp GATTCATGGTGTGATGTACACGACATGTTGAAAGAATaGCAAAAAGGCGCAAACCATCATACATTAATACAA +
Preference number: 3 (lower is better)
Translates to: DSWCDVHDMLKE*QKGANHHTLIQ
Trigger: TTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACATGTCGTGTACATCACACCATGAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000679501.1
3UTR-3UTR CAA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGGTATTTAGAATTATTTaGTTGATCGTCTCGTGGGCT +
Preference number: 3 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLVFRII*LIVSWA
Trigger: AGCCCACGAGACGATCAACAAAATAATTCTAAATAC...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCTCCAAAGGGCGGCCGTaGTGGTGGAGGAGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPISKGRP*WWRRAS
Trigger: CGAGGCCCTCCTCCACCACCACGGCCGCCCTTTGGA...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCCTCAAGGCCTGCTGTTaGGCCATCCTGAGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPILKACC*AILSSP
Trigger: GGGGGAGCTCAGGATGGCCCAACAGCAGGCCTTGAG...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACGGGCGGCCGTGGTGGTaGAGGAGGGCCTCGCATCAT +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYGRPWW*RRASHH
Trigger: ATGATGCGAGGCCCTCCTCCACCACCACGGCCGCCC...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACCGATGCTGTGGGAGGTaGGGGTGGACCCCGGCGATC +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYRCCGR*GWTPAI
Trigger: GATCGCCGGGGTCCACCCCCACCTCCCACAGCATCG...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR GCA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCCGGAACCTCAAGGCCTaGTGTTGGGCCATCCTGAGC +
Preference number: 4 (lower is better)
Translates to: RSSTYATISLRLSSGTQSRNLKA*CWAILS
Trigger: GCTCAGGATGGCCCAACAGCAGGCCTTGAGGTTCCG...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR GCA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCCTGAGCCTGAACCTGTaGCTGGGCTGCAAGCATAGG +
Preference number: 4 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPILSLNL*LGCKHR
Trigger: CCTATGCTTGCAGCCCAGGCACAGGTTCAGGCTCAG...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCTCGCATCACTGCATTTaGTGGGGGAGCCGGACCTCG +
Preference number: 4 (lower is better)
Translates to: RSSTYATISLRLSSGTQSSHHCI*WGSRTS
Trigger: CGAGGTCCGGCTCCCCCACCAAATGCAGTGATGCGA...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCCCTCCAGAGGGACAATaGCCCTTTCTCGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPIPPEGQ*PFLGQL
Trigger: AAGCTGCCCGAGAAAGGGCCATTGTCCCTCTGGAGG...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR GCA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCTTGTGCTTGCACTTGTaGCTGGACCTGGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: RSSTYATISLRLSSGTQSLCLHL*LDLGLD
Trigger: GTCCAGGCCCAGGTCCAGGCACAAGTGCAAGCACAA...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR GCA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCGGCTGGGGAACGGTTTaGACAGGTGTGGCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: RSSTYATISLRLSSGTQSGWGTV*TGVAVG
Trigger: TCCTACAGCCACACCTGTGCAAACCGTTCCCCAGCC...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACAGGTCGCATCAGAGGTaGTGGGCCTCGCATCACTGC +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYRSHQR*WASHHC
Trigger: GCAGTGATGCGAGGCCCACCACCTCTGATGCGACCT...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCTGGAGGTATCCCTCCTaGAGGAGGCATTGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: RSSTYATISLRLSSGTQSWRYPS*RRHWRH
Trigger: ATGCCGCCAATGCCTCCTCCAGGAGGGATACCTCCA...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACTGGAGGGCCCATAGGTaGAGGTATCCCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYWRAHR*RYPSWR
Trigger: CCTCCAGGAGGGATACCTCCACCTATGGGCCCTCCA...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCAGGAGGCATGAAAGGTaGTCTCTGGAGGTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPIRRHER*SLEVWR
Trigger: CCTCCACACCTCCAGAGACCACCTTTCATGCCTCCT...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCGGATACTGCAGGTGCTaGGCTACTGGTCGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: RSSTYATISLRLSSGTQSGYCRC*ATGRRG
Trigger: ACCCCTACGACCAGTAGCCCAGCACCTGCAGTATCC...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCAGGAGCAGTAGCAACTaGCTTTGCCTTCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPIRSSSN*LCLLGS
Trigger: GCTGCCCAGAAGGCAAAGCCAGTTGCTACTGCTCCT...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp CTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGTGGGCTCCGATGCTGTaGGAGGTGGGGGTGGACCCC +
Preference number: 4 (lower is better)
Translates to: LLLLACINTARKNVTKSLWAPML*EVGVDP
Trigger: GGGGTCCACCCCCACCTCCCACAGCATCGGAGCCCA...CAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp GCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTTCCAAAGGGCGGCCGTaGTGGTGGAGGAGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: ASGKFKPQMLLLLACINTSKGRP*WWRRAS
Trigger: CGAGGCCCTCCTCCACCACCACGGCCGCCCTTTGGA...AGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGATCCAAAGGGCGGCCGTaGTGGTGGAGGAGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGSKGRP*WWRRAS
Trigger: CGAGGCCCTCCTCCACCACCACGGCCGCCCTTTGGA...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGGAGGGGCCATTCCTaGCAATACACCGGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: RSSTYATISLRLSSGTQSRRGHS*QYTGLG
Trigger: ACCAAGACCGGTGTATTGCCAGGAATGGCCCCTCCT...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGACGATGCTGTGGGAGGTaGGGGTGGACCCCGGCGATC +
Preference number: 4 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGRCCGR*GWTPAI
Trigger: GATCGCCGGGGTCCACCCCCACCTCCCACAGCATCG...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp CAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGCGATGCTGTGGGAGGTaGGGGTGGACCCCGGCGATC +
Preference number: 4 (lower is better)
Translates to: QMLLLLACINTARKNVTKRCCGR*GWTPAI
Trigger: GATCGCCGGGGTCCACCCCCACCTCCCACAGCATCG...CTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR TCA 90 bp GCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCAGGAGGTAACGTCTaGGGGTGCGGCTGGGGAACG +
Preference number: 4 (lower is better)
Translates to: ASGKFKPQMLLLLACINTAGGNV*GCGWGT
Trigger: CGTTCCCCAGCCGCACCCTCAGACGTTACCTCCTGC...AGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACCCAACTGCTTGTGCTTaGACTTGTGCCTGGACCTGG +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYPTACA*TCAWTW
Trigger: CCAGGTCCAGGCACAAGTGCAAGCACAAGCAGTTGG...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR GCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACAGTGGATACTGCAGGTaGTGGGCTACTGGTCGTAGG +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYSGYCR*WATGRR
Trigger: CCTACGACCAGTAGCCCAGCACCTGCAGTATCCACT...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR GCA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCAGTAGCAACTGGCTTTaGCTTCTGGGCAGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPISSNWL*LLGSLF
Trigger: GAAAAGGCTGCCCAGAAGGCAAAGCCAGTTGCTACT...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR GCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACTCGTTCTCGAAGGCTTaGCTCAATGCGGGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYSFSKA*LNAGLP
Trigger: AGGCAAGCCCGCATTGAGGCAAGCCTTCGAGAACGA...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACTCGCATCAGAGGTGGTaGGCCTCGCATCACTGCATT +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYSHQRW*ASHHCI
Trigger: AATGCAGTGATGCGAGGCCCACCACCTCTGATGCGA...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp ATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCAAAAGGGCGGCCGTGGTaGTGGAGGAGGGCCTCGCAT +
Preference number: 4 (lower is better)
Translates to: MLLLLACINTARKNVTKSKGRPW*WRRASH
Trigger: ATGCGAGGCCCTCCTCCACCACCACGGCCGCCCTTT...TGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp TTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGACTAAAGGGCGGCCGTGGTaGTGGAGGAGGGCCTCGCAT +
Preference number: 4 (lower is better)
Translates to: LLLACINTARKNVTKSLTKGRPW*WRRASH
Trigger: ATGCGAGGCCCTCCTCCACCACCACGGCCGCCCTTT...AGTCAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCATGAAAGGTGGTCTCTaGAGGTGTGGAGGGCCCATA +
Preference number: 4 (lower is better)
Translates to: RSSTYATISLRLSSGTQSMKGGL*RCGGPI
Trigger: TATGGGCCCTCCACACCTCCAGAGACCACCTTTCAT...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCTGCTACACCTGGAAGTaGAATTGGCATGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPICYTWK*NWHARK
Trigger: CTTCCTGGCATGCCAATTCCACTTCCAGGTGTAGCA...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp TTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACTGGGCTCCGATGCTGTaGGAGGTGGGGGTGGACCCC +
Preference number: 4 (lower is better)
Translates to: FKPQMLLLLACINTARKNWAPML*EVGVDP
Trigger: GGGGTCCACCCCCACCTCCCACAGCATCGGAGCCCA...GTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACTTGTTGATCGTCTCGTaGGCTCCGATGCTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYLLIVS*APMLWE
Trigger: CTCCCACAGCATCGGAGCCCACGAGACGATCAACAA...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR TCA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCGCAGAACTTGGGGTCTaGTCTTGTGTTGTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: RSSTYATISLRLSSGTQSAELGV*SCVVGV
Trigger: AACACCCACAACACAAGATCAGACCCCAAGTTCTGC...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR TCA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCTGTAGGAGCAGGAGTTaGAACACTAACTGTAGGCGT +
Preference number: 4 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPICRSRS*NTNCRR
Trigger: ACGCCTACAGTTAGTGTTTCAACTCCTGCTCCTACA...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR GCA 90 bp CAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTGGGCCTCGCATCACTaGATTTGGTGGGGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: QMLLLLACINTARKNVTKWASHH*IWWGSR
Trigger: CCGGCTCCCCCACCAAATGCAGTGATGCGAGGCCCA...CTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGATGGGCCTCGCATCACTaGATTTGGTGGGGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGWASHH*IWWGSR
Trigger: CCGGCTCCCCCACCAAATGCAGTGATGCGAGGCCCA...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACAGCTCCAACTGCTTGTaGTTGCACTTGTGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYSSNCL*LHLCLD
Trigger: GTCCAGGCACAAGTGCAAGCACAAGCAGTTGGAGCT...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR GCA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCGCTTCTTCTCGTTTGTaGTGCTCTCTCTCTCGATCT +
Preference number: 4 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPIASSRL*CSLSRS
Trigger: AGATCGAGAGAGAGAGCAGCACAAACGAGAAGAAGC...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGACTCAAGGCCTGCTGTTaGGCCATCCTGAGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGLKACC*AILSSP
Trigger: GGGGGAGCTCAGGATGGCCCAACAGCAGGCCTTGAG...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACAGGAGGCATTCCTGGTaGAAACATCATACCCGGAGG +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYRRHSW*KHHTRR
Trigger: CCTCCGGGTATGATGTTTCCACCAGGAATGCCTCCT...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCCGGAGGTACCATTACTaGTGGAAAAGCAGGTATTGC +
Preference number: 4 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPIRRYHY*WKSRYC
Trigger: GCAATACCTGCTTTTCCACCAGTAATGGTACCTCCG...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR TCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACTCTGAACGGGCCTTTTaGACCTCCCTTTCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYSERAF*TSLSRS
Trigger: AGAACGAGAAAGGGAGGTTCAAAAGGCCCGTTCAGA...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR GCA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGACGGAACCTCAAGGCCTaGTGTTGGGCCATCCTGAGC +
Preference number: 4 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGRNLKA*CWAILS
Trigger: GCTCAGGATGGCCCAACAGCAGGCCTTGAGGTTCCG...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCTGGAAAAGCAGGTATTaGTGTTGTTGGCTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPIWKSRY*CCWLRY
Trigger: GTACCTCAGCCAACAACAGCAATACCTGCTTTTCCA...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR GCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACGAAGTGGAATTGGCATaGCAGGAAGGGGAACACGAA +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYEVELA*QEGEHE
Trigger: TTCGTGTTCCCCTTCCTGGCATGCCAATTCCACTTC...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR GCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACCCTGCGTTCTTCCTCTaGCCTGGTCTTTACATACTG +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYPAFFL*PGLYIL
Trigger: CAGTATGTAAAGACCAGGGCAGAGGAAGAACGCAGG...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGATCGCATCACTGCATTTaGTGGGGGAGCCGGACCTCG +
Preference number: 4 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGSHHCI*WGSRTS
Trigger: CGAGGTCCGGCTCCCCCACCAAATGCAGTGATGCGA...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp CAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGAGGTCGCATCAGAGGTaGTGGGCCTCGCATCACTGC +
Preference number: 4 (lower is better)
Translates to: QMLLLLACINTARKNVTKRSHQR*WASHHC
Trigger: GCAGTGATGCGAGGCCCACCACCTCTGATGCGACCT...CTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp CACTTAATGGTGAATAAAATATGTTTAACCAGTGGTTCTATTCTGGCCAACATGGGGCGGCCGTGGTGGTaGAGGAGGGCCTCGCATCAT +
Preference number: 4 (lower is better)
Translates to: HLMVNKICLTSGSILANMGRPWW*RRASHH
Trigger: ATGATGCGAGGCCCTCCTCCACCACCACGGCCGCCC...CATGTTGGCCAGAATAGAACCACTGGTTAAACATATTTTATTCACCATTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGGGGCGGCCGTGGTGGTaGAGGAGGGCCTCGCATCAT +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLGRPWW*RRASHH
Trigger: ATGATGCGAGGCCCTCCTCCACCACCACGGCCGCCC...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CCA 90 bp GCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTTGGAGGGCCCATAGGTaGAGGTATCCCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ASGKFKPQMLLLLACINTWRAHR*RYPSWR
Trigger: CCTCCAGGAGGGATACCTCCACCTATGGGCCCTCCA...AGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp CTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGGGATACTGCAGGTGCTaGGCTACTGGTCGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: LLLLACINTARKNVTKSLGYCRC*ATGRRG
Trigger: ACCCCTACGACCAGTAGCCCAGCACCTGCAGTATCC...CAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCATGATGATGTTGAAGTaGATACTGCAGGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RSSTYATISLRLSSGTQSMMMLK*ILQVLG
Trigger: GCCCAGCACCTGCAGTATCCACTTCAACATCATCAT...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCCATCATTGCTACACCTaGAAGTGGAATTGGCATGCC +
Preference number: 4 (lower is better)
Translates to: RSSTYATISLRLSSGTQSHHCYT*KWNWHA
Trigger: GGCATGCCAATTCCACTTCCAGGTGTAGCAATGATG...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACGCTGCAATAGCAACCTaGGGATGTATCATGGGTACG +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYAAIAT*GCIMGT
Trigger: CGTACCCATGATACATCCCCAGGTTGCTATTGCAGC...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACCCAAACGACACACCATaGAGTACCAGGAATAGGAGC +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYPNDTP*STRNRS
Trigger: GCTCCTATTCCTGGTACTCCATGGTGTGTCGTTTGG...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp CAGCCTATATTTGAGTATGTATGTCAGTCATGCCACACAAAGAAAAGCATAAATTGTGGGAGGTGGGGGTaGACCCCGGCGATCCAGGTC +
Preference number: 4 (lower is better)
Translates to: QPIFEYVCQSCHTKKSINCGRWG*TPAIQV
Trigger: GACCTGGATCGCCGGGGTCCACCCCCACCTCCCACA...ATTTATGCTTTTCTTTGTGTGGCATGACTGACATACATACTCAAATATAGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGTGTGGGAGGTGGGGGTaGACCCCGGCGATCCAGGTC +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLCGRWG*TPAIQV
Trigger: GACCTGGATCGCCGGGGTCCACCCCCACCTCCCACA...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGTGGGCTCCGATGCTGTaGGAGGTGGGGGTGGACCCC +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLWAPML*EVGVDP
Trigger: GGGGTCCACCCCCACCTCCCACAGCATCGGAGCCCA...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR TCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACTACTGTCTGCGCAACTaGAGTAGCAGTTGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYYCLRN*SSSCCG
Trigger: ACCACAACAACTGCTACTTCAGTTGCGCAGACAGTA...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR TCA 90 bp CACTTAATGGTGAATAAAATATGTTTAACCAGTGGTTCTATTCTGGCCAACATGGCAGGAGGTAACGTCTaGGGGTGCGGCTGGGGAACG +
Preference number: 4 (lower is better)
Translates to: HLMVNKICLTSGSILANMAGGNV*GCGWGT
Trigger: CGTTCCCCAGCCGCACCCTCAGACGTTACCTCCTGC...CATGTTGGCCAGAATAGAACCACTGGTTAAACATATTTTATTCACCATTAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR TCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGGCAGGAGGTAACGTCTaGGGGTGCGGCTGGGGAACG +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLAGGNV*GCGWGT
Trigger: CGTTCCCCAGCCGCACCCTCAGACGTTACCTCCTGC...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR TCA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCCTCATGCAAGCATTTTaGATAGATGCCCCTATGGAA +
Preference number: 4 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPILMQAF*IDAPME
Trigger: TTCCATAGGGGCATCTATTCAAAATGCTTGCATGAG...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR TCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACGATCTGTTCTGTGGATaGACAGAGGACTTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYDLFCG*TEDFSL
Trigger: CAGACTGAAGTCCTCTGTTCATCCACAGAACAGATC...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR GCA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGATTGTGCTTGCACTTGTaGCTGGACCTGGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGLCLHL*LDLGLD
Trigger: GTCCAGGCCCAGGTCCAGGCACAAGTGCAAGCACAA...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp CTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGAGTGGATACTGCAGGTaGTGGGCTACTGGTCGTAGG +
Preference number: 4 (lower is better)
Translates to: LLLLACINTARKNVTKSLSGYCR*WATGRR
Trigger: CCTACGACCAGTAGCCCAGCACCTGCAGTATCCACT...CAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp TTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGACTGGCTGGGGAACGGTTTaGACAGGTGTGGCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: LLLACINTARKNVTKSLTGWGTV*TGVAVG
Trigger: TCCTACAGCCACACCTGTGCAAACCGTTCCCCAGCC...AGTCAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACGGGCAGCTGACTATTTaGATCATTGCTACACCTGGA +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYGQLTI*IIATPG
Trigger: TCCAGGTGTAGCAATGATGCAAATAGTCAGCTGCCC...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR GCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACTGTCAACATCTGCCCTaGCAATCAGATCATCAGGTC +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYCQHLP*QSDHQV
Trigger: GACCTGATGATCTGATTGGCAGGGCAGATGTTGACA...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR GCA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCATTGTCGGAGTTGGGTaGCTTAGTTTCTTCAATTCC +
Preference number: 4 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPIIVGVG*LSFFNS
Trigger: GGAATTGAAGAAACTAAGGCACCCAACTCCGACAAT...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR GCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACAGCATGTCCTTGAACTaGTTCATTCGAGCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYSMSLN*FIRASR
Trigger: TCTGGAGGCTCGAATGAAGCAGTTCAAGGACATGCT...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp GCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTCATCACTGCATTTGGTaGGGGAGCCGGACCTCGGAA +
Preference number: 4 (lower is better)
Translates to: ASGKFKPQMLLLLACINTHHCIW*GSRTSE
Trigger: TTCCGAGGTCCGGCTCCCCCACCAAATGCAGTGATG...AGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGAAAGGGCGGCCGTGGTaGTGGAGGAGGGCCTCGCAT +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLKGRPW*WRRASH
Trigger: ATGCGAGGCCCTCCTCCACCACCACGGCCGCCCTTT...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACTCCTGGAGGAGGCATTaGCGGCATATTAGGATCAAA +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYSWRRH*RHIRIK
Trigger: TTTGATCCTAATATGCCGCCAATGCCTCCTCCAGGA...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp ATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCATGGAGGTATCCCTCCTaGAGGAGGCATTGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: MLLLLACINTARKNVTKSWRYPS*RRHWRH
Trigger: ATGCCGCCAATGCCTCCTCCAGGAGGGATACCTCCA...TGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAACCTTAACTCCATCTaGCTTGGTCCATGCAGATTC +
Preference number: 4 (lower is better)
Translates to: RSSTYATISLRLSSGTQSNLNSI*LGPCRF
Trigger: GAATCTGCATGGACCAAGCCAGATGGAGTTAAGGTT...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCTCTGATCTTGTGTTGTaGGTGTTGATACTGTCTGCG +
Preference number: 4 (lower is better)
Translates to: RSSTYATISLRLSSGTQSSDLVL*VLILSA
Trigger: CGCAGACAGTATCAACACCCACAACACAAGATCAGA...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp GCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTCTCCTCCGTCTCCATTaGCAGAGGCTCTTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: ASGKFKPQMLLLLACINTLLRLH*QRLFRG
Trigger: CCCTCTGAAGAGCCTCTGCCAATGGAGACGGAGGAG...AGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp CTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGTTGTTGATCGTCTCGTaGGCTCCGATGCTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LLLLACINTARKNVTKSLLLIVS*APMLWE
Trigger: CTCCCACAGCATCGGAGCCCACGAGACGATCAACAA...CAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR TCA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCTTACATACGGGCAGCTaGCTATTTGCATCATTGCTA +
Preference number: 4 (lower is better)
Translates to: RSSTYATISLRLSSGTQSLHTGS*LFASLL
Trigger: TAGCAATGATGCAAATAGTCAGCTGCCCGTATGTAA...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR GCA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACCTGAGCCTGAACCTGTaGCTGGGCTGCAAGCATAGG +
Preference number: 4 (lower is better)
Translates to: FASGKFKPQMLLLLACINLSLNL*LGCKHR
Trigger: CCTATGCTTGCAGCCCAGGCACAGGTTCAGGCTCAG...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACTTGTGCTTGCACTTGTaGCTGGACCTGGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: FASGKFKPQMLLLLACINLCLHL*LDLGLD
Trigger: GTCCAGGCCCAGGTCCAGGCACAAGTGCAAGCACAA...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACGGCTGGGGAACGGTTTaGACAGGTGTGGCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: FASGKFKPQMLLLLACINGWGTV*TGVAVG
Trigger: TCCTACAGCCACACCTGTGCAAACCGTTCCCCAGCC...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCGACTATTTGCATCATTaGTACACCTGGAAGTGGAAT +
Preference number: 4 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPIDYLHH*YTWKWN
Trigger: ATTCCACTTCCAGGTGTAGCAATGATGCAAATAGTC...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR GCA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCTCTTCTCGTTTGTGCTaGTCTCTCTCTCGATCTATT +
Preference number: 4 (lower is better)
Translates to: RSSTYATISLRLSSGTQSSSRLC*SLSRSI
Trigger: AATAGATCGAGAGAGAGAGCAGCACAAACGAGAAGA...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp CACTTAATGGTGAATAAAATATGTTTAACCAGTGGTTCTATTCTGGCCAACATGCTCAAGGCCTGCTGTTaGGCCATCCTGAGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: HLMVNKICLTSGSILANMLKACC*AILSSP
Trigger: GGGGGAGCTCAGGATGGCCCAACAGCAGGCCTTGAG...CATGTTGGCCAGAATAGAACCACTGGTTAAACATATTTTATTCACCATTAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CCA 90 bp ATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCATCGCATCAGAGGTGGTaGGCCTCGCATCACTGCATT +
Preference number: 4 (lower is better)
Translates to: MLLLLACINTARKNVTKSSHQRW*ASHHCI
Trigger: AATGCAGTGATGCGAGGCCCACCACCTCTGATGCGA...TGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp GACATGTTGAAAGAATGCCAAAAAGGCGCAAACCATCATACATTAATACAAAGGTGGTCTCTGGAGGTGTaGAGGGCCCATAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: DMLKECQKGANHHTLIQRWSLEV*RAHRWR
Trigger: CCTCCACCTATGGGCCCTCCACACCTCCAGAGACCA...CCTTTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CCA 90 bp GCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTAGGAGGCATGAAAGGTaGTCTCTGGAGGTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ASGKFKPQMLLLLACINTRRHER*SLEVWR
Trigger: CCTCCACACCTCCAGAGACCACCTTTCATGCCTCCT...AGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACCTCCTCCGTCTCCATTaGCAGAGGCTCTTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: FASGKFKPQMLLLLACINLLRLH*QRLFRG
Trigger: CCCTCTGAAGAGCCTCTGCCAATGGAGACGGAGGAG...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp GCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTAGGAGCAGTAGCAACTaGCTTTGCCTTCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: ASGKFKPQMLLLLACINTRSSSN*LCLLGS
Trigger: GCTGCCCAGAAGGCAAAGCCAGTTGCTACTGCTCCT...AGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACCCTCCAGAGGGACAATaGCCCTTTCTCGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: FASGKFKPQMLLLLACINPPEGQ*PFLGQL
Trigger: AAGCTGCCCGAGAAAGGGCCATTGTCCCTCTGGAGG...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp TTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACCCTCCAGAGGGACAATaGCCCTTTCTCGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: FKPQMLLLLACINTARKNPPEGQ*PFLGQL
Trigger: AAGCTGCCCGAGAAAGGGCCATTGTCCCTCTGGAGG...GTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR TCA 90 bp ATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCATGTTGGCTGAGGTACTaGATGAGGAACAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: MLLLLACINTARKNVTKSCWLRY*MRNSRR
Trigger: CCTCCTGCTGTTCCTCATTCAGTACCTCAGCCAACA...TGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR TCA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCCTGGTCTTTACATACTaGTCAAACACCTGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: RSSTYATISLRLSSGTQSLVFTY*SNTCFL
Trigger: GAGAAAACAGGTGTTTGATCAGTATGTAAAGACCAG...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR TCA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCAATTGCTTTGAATCTTaGATCTTTAGCATGCTTGGC +
Preference number: 4 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPINCFES*IFSMLG
Trigger: GCCAAGCATGCTAAAGATTCAAGATTCAAAGCAATT...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR TCA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACCCAGATTCCCAGCGGTaGTCTTTTCGGAGGGTCCTA +
Preference number: 4 (lower is better)
Translates to: FASGKFKPQMLLLLACINPDSQR*SFRRVL
Trigger: TAGGACCCTCCGAAAAGATCACCGCTGGGAATCTGG...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR TCA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCGGTTTCGCAATAGGTTaGCTAATGCACATATATGTA +
Preference number: 4 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPIGFAIG*LMHIYV
Trigger: TACATATATGTGCATTAGTCAACCTATTGCGAAACC...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR GCA 90 bp CAGCCTATATTTGAGTATGTATGTCAGTCATGCCACACAAAGAAAAGCATAAATCGGAACCTCAAGGCCTaGTGTTGGGCCATCCTGAGC +
Preference number: 4 (lower is better)
Translates to: QPIFEYVCQSCHTKKSINRNLKA*CWAILS
Trigger: GCTCAGGATGGCCCAACAGCAGGCCTTGAGGTTCCG...ATTTATGCTTTTCTTTGTGTGGCATGACTGACATACATACTCAAATATAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp GCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTATCTGGCTTGGTCCATaGAGATTCACGTGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: ASGKFKPQMLLLLACINTIWLGP*RFTCPS
Trigger: GCTCGGACACGTGAATCTGCATGGACCAAGCCAGAT...AGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp CAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGATCTGGCTTGGTCCATaGAGATTCACGTGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: QMLLLLACINTARKNVTKIWLGP*RFTCPS
Trigger: GCTCGGACACGTGAATCTGCATGGACCAAGCCAGAT...CTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp CAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGAGCTCCAACTGCTTGTaGTTGCACTTGTGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: QMLLLLACINTARKNVTKSSNCL*LHLCLD
Trigger: GTCCAGGCACAAGTGCAAGCACAAGCAGTTGGAGCT...CTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp CTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGGCCTCAATGCGGGCTTaGCTTTCAAGCTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LLLLACINTARKNVTKSLASMRA*LSSSFS
Trigger: AGAAAAGGAGCTTGAAAGGCAAGCCCGCATTGAGGC...CAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACTCGTTCTCGAAGGCTTaGCTCAATGCGGGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: FASGKFKPQMLLLLACINSFSKA*LNAGLP
Trigger: AGGCAAGCCCGCATTGAGGCAAGCCTTCGAGAACGA...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCGTTTCATCCAGAAGTTaGCTAAAGTGCTCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: RSSTYATISLRLSSGTQSVSSRS*LKCSLF
Trigger: AAAGAGAGAGCACTTTAGGCAACTTCTGGATGAAAC...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGTCGCATCACTGCATTTaGTGGGGGAGCCGGACCTCG +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLSHHCI*WGSRTS
Trigger: CGAGGTCCGGCTCCCCCACCAAATGCAGTGATGCGA...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGTGGAGGGCCCATAGGTaGAGGTATCCCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLWRAHR*RYPSWR
Trigger: CCTCCAGGAGGGATACCTCCACCTATGGGCCCTCCA...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CCA 90 bp CAGCCTATATTTGAGTATGTATGTCAGTCATGCCACACAAAGAAAAGCATAAATTGGTCTCTGGAGGTGTaGAGGGCCCATAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QPIFEYVCQSCHTKKSINWSLEV*RAHRWR
Trigger: CCTCCACCTATGGGCCCTCCACACCTCCAGAGACCA...ATTTATGCTTTTCTTTGTGTGGCATGACTGACATACATACTCAAATATAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGTGGTCTCTGGAGGTGTaGAGGGCCCATAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLWSLEV*RAHRWR
Trigger: CCTCCACCTATGGGCCCTCCACACCTCCAGAGACCA...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CCA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAATGAAAGGTGGTCTCTaGAGGTGTGGAGGGCCCATA +
Preference number: 4 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGMKGGL*RCGGPI
Trigger: TATGGGCCCTCCACACCTCCAGAGACCACCTTTCAT...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp TTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACAGGAGGCATGAAAGGTaGTCTCTGGAGGTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: FKPQMLLLLACINTARKNRRHER*SLEVWR
Trigger: CCTCCACACCTCCAGAGACCACCTTTCATGCCTCCT...GTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp CAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGAGGAGGCATTCCTGGTaGAAACATCATACCCGGAGG +
Preference number: 4 (lower is better)
Translates to: QMLLLLACINTARKNVTKRRHSW*KHHTRR
Trigger: CCTCCGGGTATGATGTTTCCACCAGGAATGCCTCCT...CTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp GCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTACCTGGAAGTGGAATTaGCATGCCAGGAAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: ASGKFKPQMLLLLACINTTWKWN*HARKGN
Trigger: GTTCCCCTTCCTGGCATGCCAATTCCACTTCCAGGT...AGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp ATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCAACCTGGAAGTGGAATTaGCATGCCAGGAAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: MLLLLACINTARKNVTKSTWKWN*HARKGN
Trigger: GTTCCCCTTCCTGGCATGCCAATTCCACTTCCAGGT...TGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACGTTCTTCCTCTGCCCTaGTCTTTACATACTGATCAA +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYVLPLP*SLHTDQ
Trigger: TTGATCAGTATGTAAAGACCAGGGCAGAGGAAGAAC...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR TCA 90 bp TTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGACTCTAGCAGCATGTCCTTaGACTGCTTCATTCGAGCCT +
Preference number: 4 (lower is better)
Translates to: LLLACINTARKNVTKSLTLAACP*TASFEP
Trigger: AGGCTCGAATGAAGCAGTTCAAGGACATGCTGCTAG...AGTCAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR TCA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGATCTGAACGGGCCTTTTaGACCTCCCTTTCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGSERAF*TSLSRS
Trigger: AGAACGAGAAAGGGAGGTTCAAAAGGCCCGTTCAGA...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp CACTTAATGGTGAATAAAATATGTTTAACCAGTGGTTCTATTCTGGCCAACATGCTGAGCCTGAACCTGTaGCTGGGCTGCAAGCATAGG +
Preference number: 4 (lower is better)
Translates to: HLMVNKICLTSGSILANMLSLNL*LGCKHR
Trigger: CCTATGCTTGCAGCCCAGGCACAGGTTCAGGCTCAG...CATGTTGGCCAGAATAGAACCACTGGTTAAACATATTTTATTCACCATTAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR GCA 90 bp CGACATGTTGAAAGAATGCCAAAAAGGCGCAAACCATCATACATTAATACAAAGCCAACTGCTTGTGCTTaGACTTGTGCCTGGACCTGG +
Preference number: 4 (lower is better)
Translates to: RHVERMPKRRKPSYINTKPTACA*TCAWTW
Trigger: CCAGGTCCAGGCACAAGTGCAAGCACAAGCAGTTGG...CTTTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACATGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR GCA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACAGCTCCAACTGCTTGTaGTTGCACTTGTGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: FASGKFKPQMLLLLACINSSNCL*LHLCLD
Trigger: GTCCAGGCACAAGTGCAAGCACAAGCAGTTGGAGCT...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp CTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGGGGCAGCTGACTATTTaGATCATTGCTACACCTGGA +
Preference number: 4 (lower is better)
Translates to: LLLLACINTARKNVTKSLGQLTI*IIATPG
Trigger: TCCAGGTGTAGCAATGATGCAAATAGTCAGCTGCCC...CAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR GCA 90 bp ATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCAAGTAGCAACTGGCTTTaGCTTCTGGGCAGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: MLLLLACINTARKNVTKSSSNWL*LLGSLF
Trigger: GAAAAGGCTGCCCAGAAGGCAAAGCCAGTTGCTACT...TGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACAATTTTGTCAACATCTaGCCTGCCAATCAGATCATC +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYNFVNI*PANQII
Trigger: GATGATCTGATTGGCAGGGCAGATGTTGACAAAATT...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR GCA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGACCTGCGTTCTTCCTCTaGCCTGGTCTTTACATACTG +
Preference number: 4 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGPAFFL*PGLYIL
Trigger: CAGTATGTAAAGACCAGGGCAGAGGAAGAACGCAGG...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACCTTTGTCTTTTACTTTaGTCCATCGAGACTGACTGT +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYLCLLL*SIETDC
Trigger: ACAGTCAGTCTCGATGGAGCAAAGTAAAAGACAAAG...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR GCA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAGCCTCAATGCGGGCTTaGCTTTCAAGCTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGASMRA*LSSSFS
Trigger: AGAAAAGGAGCTTGAAAGGCAAGCCCGCATTGAGGC...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGCATCACTGCATTTGGTaGGGGAGCCGGACCTCGGAA +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLHHCIW*GSRTSE
Trigger: TTCCGAGGTCCGGCTCCCCCACCAAATGCAGTGATG...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CCA 90 bp CAGCCTATATTTGAGTATGTATGTCAGTCATGCCACACAAAGAAAAGCATAAATTGGAGGTATCCCTCCTaGAGGAGGCATTGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: QPIFEYVCQSCHTKKSINWRYPS*RRHWRH
Trigger: ATGCCGCCAATGCCTCCTCCAGGAGGGATACCTCCA...ATTTATGCTTTTCTTTGTGTGGCATGACTGACATACATACTCAAATATAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCATAAACCTTCCCATCTaGAGTTTTATTTTCAACCCA +
Preference number: 4 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPIINLPI*SFIFNP
Trigger: TGGGTTGAAAATAAAACTCCAGATGGGAAGGTTTAT...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp CAGCCTATATTTGAGTATGTATGTCAGTCATGCCACACAAAGAAAAGCATAAATGGATACTGCAGGTGCTaGGCTACTGGTCGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: QPIFEYVCQSCHTKKSINGYCRC*ATGRRG
Trigger: ACCCCTACGACCAGTAGCCCAGCACCTGCAGTATCC...ATTTATGCTTTTCTTTGTGTGGCATGACTGACATACATACTCAAATATAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp CTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGCATCATTGCTACACCTaGAAGTGGAATTGGCATGCC +
Preference number: 4 (lower is better)
Translates to: LLLLACINTARKNVTKSLHHCYT*KWNWHA
Trigger: GGCATGCCAATTCCACTTCCAGGTGTAGCAATGATG...CAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CCA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAGCTGCAATAGCAACCTaGGGATGTATCATGGGTACG +
Preference number: 4 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGAAIAT*GCIMGT
Trigger: CGTACCCATGATACATCCCCAGGTTGCTATTGCAGC...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp CAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGGCTGCAATAGCAACCTaGGGATGTATCATGGGTACG +
Preference number: 4 (lower is better)
Translates to: QMLLLLACINTARKNVTKAAIAT*GCIMGT
Trigger: CGTACCCATGATACATCCCCAGGTTGCTATTGCAGC...CTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCTTTTCCTTTAGTTCTTaGGGTTTTTCCCAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: RSSTYATISLRLSSGTQSFSFSS*GFSQVD
Trigger: ATCAACCTGGGAAAAACCCCAAGAACTAAAGGAAAA...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGCTCCTCCGTCTCCATTaGCAGAGGCTCTTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLLLRLH*QRLFRG
Trigger: CCCTCTGAAGAGCCTCTGCCAATGGAGACGGAGGAG...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CCA 90 bp ATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACCAAACGACACACCATaGAGTACCAGGAATAGGAGC +
Preference number: 4 (lower is better)
Translates to: MLLLLACINTARKNVTKSPNDTP*STRNRS
Trigger: GCTCCTATTCCTGGTACTCCATGGTGTGTCGTTTGG...TGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp CAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCCTGGCAATACACCTaGAAGTGGAATTGGCATGCC +
Preference number: 4 (lower is better)
Translates to: QMLLLLACINTARKNVTKSWQYT*KWNWHA
Trigger: GGCATGCCAATTCCACTTCCAGGTGTATTGCCAGGA...CTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394421.7
CDS-3UTR TCA 90 bp CAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTACTGTCTGCGCAACTaGAGTAGCAGTTGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: QMLLLLACINTARKNVTKYCLRN*SSSCCG
Trigger: ACCACAACAACTGCTACTTCAGTTGCGCAGACAGTA...CTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR TCA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGATACTGTCTGCGCAACTaGAGTAGCAGTTGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGYCLRN*SSSCCG
Trigger: ACCACAACAACTGCTACTTCAGTTGCGCAGACAGTA...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR TCA 90 bp CAATTAGGAACTGATTCATGGTGTGATGTACACGACATGTTGAAAGAATGCCAAGCAGAACTTGGGGTCTaGTCTTGTGTTGTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: QLGTDSWCDVHDMLKECQAELGV*SCVVGV
Trigger: AACACCCACAACACAAGATCAGACCCCAAGTTCTGC...TTGGCATTCTTTCAACATGTCGTGTACATCACACCATGAATCAGTTCCTAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR TCA 90 bp TTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGCAGAACTTGGGGTCTaGTCTTGTGTTGTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: FKPQMLLLLACINTARKNAELGV*SCVVGV
Trigger: AACACCCACAACACAAGATCAGACCCCAAGTTCTGC...GTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR TCA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACCTAGCAGCATGTCCTTaGACTGCTTCATTCGAGCCT +
Preference number: 4 (lower is better)
Translates to: FASGKFKPQMLLLLACINLAACP*TASFEP
Trigger: AGGCTCGAATGAAGCAGTTCAAGGACATGCTGCTAG...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR TCA 90 bp CACTTAATGGTGAATAAAATATGTTTAACCAGTGGTTCTATTCTGGCCAACATGCCAGATTCCCAGCGGTaGTCTTTTCGGAGGGTCCTA +
Preference number: 4 (lower is better)
Translates to: HLMVNKICLTSGSILANMPDSQR*SFRRVL
Trigger: TAGGACCCTCCGAAAAGATCACCGCTGGGAATCTGG...CATGTTGGCCAGAATAGAACCACTGGTTAAACATATTTTATTCACCATTAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR TCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGCCAGATTCCCAGCGGTaGTCTTTTCGGAGGGTCCTA +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLPDSQR*SFRRVL
Trigger: TAGGACCCTCCGAAAAGATCACCGCTGGGAATCTGG...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR GCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGCCAACTGCTTGTGCTTaGACTTGTGCCTGGACCTGG +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLPTACA*TCAWTW
Trigger: CCAGGTCCAGGCACAAGTGCAAGCACAAGCAGTTGG...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR GCA 90 bp CAGCCTATATTTGAGTATGTATGTCAGTCATGCCACACAAAGAAAAGCATAAATAGTGGATACTGCAGGTaGTGGGCTACTGGTCGTAGG +
Preference number: 4 (lower is better)
Translates to: QPIFEYVCQSCHTKKSINSGYCR*WATGRR
Trigger: CCTACGACCAGTAGCCCAGCACCTGCAGTATCCACT...ATTTATGCTTTTCTTTGTGTGGCATGACTGACATACATACTCAAATATAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp CTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGTGGAAAAGCAGGTATTaGTGTTGTTGGCTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: LLLLACINTARKNVTKSLWKSRY*CCWLRY
Trigger: GTACCTCAGCCAACAACAGCAATACCTGCTTTTCCA...CAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACTTTAGCATGCTTGGCTaGAAATTCACTAAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYFSMLG*KFTKSC
Trigger: GCAACTTTTAGTGAATTTGCAGCCAAGCATGCTAAA...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR GCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACCTTGAATCTTTAGCATaGTTGGCTGCAAATTCACTA +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYLESLA*LAANSL
Trigger: TAGTGAATTTGCAGCCAAGCATGCTAAAGATTCAAG...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR GCA 90 bp CACTTAATGGTGAATAAAATATGTTTAACCAGTGGTTCTATTCTGGCCAACATGTCGTTCTCGAAGGCTTaGCTCAATGCGGGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: HLMVNKICLTSGSILANMSFSKA*LNAGLP
Trigger: AGGCAAGCCCGCATTGAGGCAAGCCTTCGAGAACGA...CATGTTGGCCAGAATAGAACCACTGGTTAAACATATTTTATTCACCATTAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR GCA 90 bp ATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCAGCTTCTTCTCGTTTGTaGTGCTCTCTCTCTCGATCT +
Preference number: 4 (lower is better)
Translates to: MLLLLACINTARKNVTKSASSRL*CSLSRS
Trigger: AGATCGAGAGAGAGAGCAGCACAAACGAGAAGAAGC...TGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGCATTTTGAATAGATaGCCCTATGGAAGAGTATTT +
Preference number: 4 (lower is better)
Translates to: RSSTYATISLRLSSGTQSSILNR*PYGRVF
Trigger: AAATACTCTTCCATAGGGGCATCTATTCAAAATGCT...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR GCA 90 bp ATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCAGGAGTCTGTGGTATTTaGATCTGGCAAGTTCAAGCC +
Preference number: 4 (lower is better)
Translates to: MLLLLACINTARKNVTKSGVCGI*IWQVQA
Trigger: GGCTTGAACTTGCCAGATGCAAATACCACAGACTCC...TGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp TTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACCATCATACCAAAAGGTaGAGGAGGTCGCATCAGAGG +
Preference number: 4 (lower is better)
Translates to: FKPQMLLLLACINTARKNHHTKR*RRSHQR
Trigger: CCTCTGATGCGACCTCCTCCACCTTTTGGTATGATG...GTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp ATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCATCCTGGAGGAGGCATTaGCGGCATATTAGGATCAAA +
Preference number: 4 (lower is better)
Translates to: MLLLLACINTARKNVTKSSWRRH*RHIRIK
Trigger: TTTGATCCTAATATGCCGCCAATGCCTCCTCCAGGA...TGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp GACATGTTGAAAGAATGCCAAAAAGGCGCAAACCATCATACATTAATACAAAGGAGGAGGCATTCCTGGTaGAAACATCATACCCGGAGG +
Preference number: 4 (lower is better)
Translates to: DMLKECQKGANHHTLIQRRRHSW*KHHTRR
Trigger: CCTCCGGGTATGATGTTTCCACCAGGAATGCCTCCT...CCTTTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CCA 90 bp TTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGACTATGATGATGTTGAAGTaGATACTGCAGGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LLLACINTARKNVTKSLTMMMLK*ILQVLG
Trigger: GCCCAGCACCTGCAGTATCCACTTCAACATCATCAT...AGTCAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGACGGAGGTACCATTACTaGTGGAAAAGCAGGTATTGC +
Preference number: 4 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGRRYHY*WKSRYC
Trigger: GCAATACCTGCTTTTCCACCAGTAATGGTACCTCCG...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp CACTTAATGGTGAATAAAATATGTTTAACCAGTGGTTCTATTCTGGCCAACATGAGGAGGGGCCATTCCTaGCAATACACCGGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: HLMVNKICLTSGSILANMRRGHS*QYTGLG
Trigger: ACCAAGACCGGTGTATTGCCAGGAATGGCCCCTCCT...CATGTTGGCCAGAATAGAACCACTGGTTAAACATATTTTATTCACCATTAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGAGGAGCAGTAGCAACTaGCTTTGCCTTCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLRSSSN*LCLLGS
Trigger: GCTGCCCAGAAGGCAAAGCCAGTTGCTACTGCTCCT...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACAGAGCTTTGAAATTCTaGATAGCTTCTTCTCGTTTG +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYRALKF*IASSRL
Trigger: CAAACGAGAAGAAGCTATCCAGAATTTCAAAGCTCT...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGAGGAGGGGCCATTCCTaGCAATACACCTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLRRGHS*QYTWKW
Trigger: CCACTTCCAGGTGTATTGCCAGGAATGGCCCCTCCT...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394421.7
3UTR CAA 72 bp CATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTaGCATGTATTAACACTGCTAGGAAGAACGTCACCA +
Preference number: 4 (lower is better)
Translates to: HLASSSHKCSYF*HVLTLLGRTSP
Trigger: TGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000679501.1
CDS-3UTR TCA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACTGTAGGAGCAGGAGTTaGAACACTAACTGTAGGCGT +
Preference number: 4 (lower is better)
Translates to: FASGKFKPQMLLLLACINCRSRS*NTNCRR
Trigger: ACGCCTACAGTTAGTGTTTCAACTCCTGCTCCTACA...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR TCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGTGTTGGCTGAGGTACTaGATGAGGAACAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLCWLRY*MRNSRR
Trigger: CCTCCTGCTGTTCCTCATTCAGTACCTCAGCCAACA...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR TCA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAACGTCACCAAGTCACTaGCTTCCACACCTCATAAAA +
Preference number: 4 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGTSPSH*LPHLIK
Trigger: TTTTATGAGGTGTGGAAGTCAGTGACTTGGTGACGT...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGATCTGGCTTGGTCCATaGAGATTCACGTGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLIWLGP*RFTCPS
Trigger: GCTCGGACACGTGAATCTGCATGGACCAAGCCAGAT...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR GCA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGATGGAAAAGCAGGTATTaGTGTTGTTGGCTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGWKSRY*CCWLRY
Trigger: GTACCTCAGCCAACAACAGCAATACCTGCTTTTCCA...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAGCACTCATAGAGAATTaGCACTTTTGGATCGACAGC +
Preference number: 4 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGALIEN*HFWIDS
Trigger: GCTGTCGATCCAAAAGTGGCAATTCTCTATGAGTGC...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp CAATTAGGAACTGATTCATGGTGTGATGTACACGACATGTTGAAAGAATGCCAAAGCATGTCCTTGAACTaGTTCATTCGAGCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: QLGTDSWCDVHDMLKECQSMSLN*FIRASR
Trigger: TCTGGAGGCTCGAATGAAGCAGTTCAAGGACATGCT...TTGGCATTCTTTCAACATGTCGTGTACATCACACCATGAATCAGTTCCTAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR GCA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACAGCATGTCCTTGAACTaGTTCATTCGAGCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: FASGKFKPQMLLLLACINSMSLN*FIRASR
Trigger: TCTGGAGGCTCGAATGAAGCAGTTCAAGGACATGCT...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACGCTTCTTCTCGTTTGTaGTGCTCTCTCTCTCGATCT +
Preference number: 4 (lower is better)
Translates to: FASGKFKPQMLLLLACINASSRL*CSLSRS
Trigger: AGATCGAGAGAGAGAGCAGCACAAACGAGAAGAAGC...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp TTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGGAGTCTGTGGTATTTaGATCTGGCAAGTTCAAGCC +
Preference number: 4 (lower is better)
Translates to: FKPQMLLLLACINTARKNGVCGI*IWQVQA
Trigger: GGCTTGAACTTGCCAGATGCAAATACCACAGACTCC...GTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp CACTTAATGGTGAATAAAATATGTTTAACCAGTGGTTCTATTCTGGCCAACATGATGAAAGGTGGTCTCTaGAGGTGTGGAGGGCCCATA +
Preference number: 4 (lower is better)
Translates to: HLMVNKICLTSGSILANMMKGGL*RCGGPI
Trigger: TATGGGCCCTCCACACCTCCAGAGACCACCTTTCAT...CATGTTGGCCAGAATAGAACCACTGGTTAAACATATTTTATTCACCATTAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CCA 90 bp TTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGACTAACCTTAACTCCATCTaGCTTGGTCCATGCAGATTC +
Preference number: 4 (lower is better)
Translates to: LLLACINTARKNVTKSLTNLNSI*LGPCRF
Trigger: GAATCTGCATGGACCAAGCCAGATGGAGTTAAGGTT...AGTCAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACCGGAGGTACCATTACTaGTGGAAAAGCAGGTATTGC +
Preference number: 4 (lower is better)
Translates to: FASGKFKPQMLLLLACINRRYHY*WKSRYC
Trigger: GCAATACCTGCTTTTCCACCAGTAATGGTACCTCCG...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGACCTGGAAGTGGAATTaGCATGCCAGGAAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLTWKWN*HARKGN
Trigger: GTTCCCCTTCCTGGCATGCCAATTCCACTTCCAGGT...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CCA 90 bp CGACATGTTGAAAGAATGCCAAAAAGGCGCAAACCATCATACATTAATACAAAGTGCTACACCTGGAAGTaGAATTGGCATGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RHVERMPKRRKPSYINTKCYTWK*NWHARK
Trigger: CTTCCTGGCATGCCAATTCCACTTCCAGGTGTAGCA...CTTTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACATGTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CCA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACAGAGGGTTCTTTAATTaGCTCTTTAATCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: INICHNQFTPLLWHTVQYRGFFN*LFNLLF
Trigger: GAAGAGAAGATTAAAGAGCCAATTAAAGAACCCTCT...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR TCA 90 bp GACATGTTGAAAGAATGCCAAAAAGGCGCAAACCATCATACATTAATACAAAGGTGTAGGAGCAGGAGTTaGAACACTAACTGTAGGCGT +
Preference number: 4 (lower is better)
Translates to: DMLKECQKGANHHTLIQRCRSRS*NTNCRR
Trigger: ACGCCTACAGTTAGTGTTTCAACTCCTGCTCCTACA...CCTTTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR TCA 90 bp ATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCATTACATACGGGCAGCTaGCTATTTGCATCATTGCTA +
Preference number: 4 (lower is better)
Translates to: MLLLLACINTARKNVTKSLHTGS*LFASLL
Trigger: TAGCAATGATGCAAATAGTCAGCTGCCCGTATGTAA...TGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR TCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGCTAGCAGCATGTCCTTaGACTGCTTCATTCGAGCCT +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLLAACP*TASFEP
Trigger: AGGCTCGAATGAAGCAGTTCAAGGACATGCTGCTAG...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR TCA 90 bp ATGTTGAAAGAATGCCAAAAAGGCGCAAACCATCATACATTAATACAAAGGACATCTGAACGGGCCTTTTaGACCTCCCTTTCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: MLKECQKGANHHTLIQRTSERAF*TSLSRS
Trigger: AGAACGAGAAAGGGAGGTTCAAAAGGCCCGTTCAGA...TGTCCTTTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR TCA 90 bp CAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGCTCATGCAAGCATTTTaGATAGATGCCCCTATGGAA +
Preference number: 4 (lower is better)
Translates to: QMLLLLACINTARKNVTKLMQAF*IDAPME
Trigger: TTCCATAGGGGCATCTATTCAAAATGCTTGCATGAG...CTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR TCA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGACTCATGCAAGCATTTTaGATAGATGCCCCTATGGAA +
Preference number: 4 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGLMQAF*IDAPME
Trigger: TTCCATAGGGGCATCTATTCAAAATGCTTGCATGAG...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR TCA 90 bp TTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACAGCATCTTCTTGCTATaGGGCAATAAGGCACTGCTA +
Preference number: 4 (lower is better)
Translates to: FKPQMLLLLACINTARKNSIFLL*GNKALL
Trigger: TAGCAGTGCCTTATTGCCTCATAGCAAGAAGATGCT...GTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR TCA 90 bp CAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGATTTATGTGGCACTCTaGAACGAGCAACCTATGAAG +
Preference number: 4 (lower is better)
Translates to: QMLLLLACINTARKNVTKIYVAL*NEQPMK
Trigger: CTTCATAGGTTGCTCGTTTCAGAGTGCCACATAAAT...CTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR GCA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACGGTGTTGATACTGTCTaGGCAACTGAAGTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: FASGKFKPQMLLLLACINGVDTV*ATEVAV
Trigger: AACTGCTACTTCAGTTGCGCAGACAGTATCAACACC...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp CAGCCTATATTTGAGTATGTATGTCAGTCATGCCACACAAAGAAAAGCATAAATGAAGTGGAATTGGCATaGCAGGAAGGGGAACACGAA +
Preference number: 4 (lower is better)
Translates to: QPIFEYVCQSCHTKKSINEVELA*QEGEHE
Trigger: TTCGTGTTCCCCTTCCTGGCATGCCAATTCCACTTC...ATTTATGCTTTTCTTTGTGTGGCATGACTGACATACATACTCAAATATAGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp CTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGGACTATTTGCATCATTaGTACACCTGGAAGTGGAAT +
Preference number: 4 (lower is better)
Translates to: LLLLACINTARKNVTKSLDYLHH*YTWKWN
Trigger: ATTCCACTTCCAGGTGTAGCAATGATGCAAATAGTC...CAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR GCA 90 bp CAGCCTATATTTGAGTATGTATGTCAGTCATGCCACACAAAGAAAAGCATAAATAGTAGCAACTGGCTTTaGCTTCTGGGCAGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: QPIFEYVCQSCHTKKSINSSNWL*LLGSLF
Trigger: GAAAAGGCTGCCCAGAAGGCAAAGCCAGTTGCTACT...ATTTATGCTTTTCTTTGTGTGGCATGACTGACATACATACTCAAATATAGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGGCCTCAATGCGGGCTTaGCTTTCAAGCTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLASMRA*LSSSFS
Trigger: AGAAAAGGAGCTTGAAAGGCAAGCCCGCATTGAGGC...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR GCA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGATCTTCTCGTTTGTGCTaGTCTCTCTCTCGATCTATT +
Preference number: 4 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGSSRLC*SLSRSI
Trigger: AATAGATCGAGAGAGAGAGCAGCACAAACGAGAAGA...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp CTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGGTTTCATCCAGAAGTTaGCTAAAGTGCTCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LLLLACINTARKNVTKSLVSSRS*LKCSLF
Trigger: AAAGAGAGAGCACTTTAGGCAACTTCTGGATGAAAC...CAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp CAACATGTTAGTTATGACCGTGGTTCCATACCTGAGAAGAAATTACTACATAAACATCATACCAAAAGGTaGAGGAGGTCGCATCAGAGG +
Preference number: 4 (lower is better)
Translates to: QHVSYDRGSIPEKKLLHKHHTKR*RRSHQR
Trigger: CCTCTGATGCGACCTCCTCCACCTTTTGGTATGATG...TTTATGTAGTAATTTCTTCTCAGGTATGGAACCACGGTCATAACTAACATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGCATCATACCAAAAGGTaGAGGAGGTCGCATCAGAGG +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLHHTKR*RRSHQR
Trigger: CCTCTGATGCGACCTCCTCCACCTTTTGGTATGATG...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CCA 90 bp CAACATGTTAGTTATGACCGTGGTTCCATACCTGAGAAGAAATTACTACATAAACCAAACGACACACCATaGAGTACCAGGAATAGGAGC +
Preference number: 4 (lower is better)
Translates to: QHVSYDRGSIPEKKLLHKPNDTP*STRNRS
Trigger: GCTCCTATTCCTGGTACTCCATGGTGTGTCGTTTGG...TTTATGTAGTAATTTCTTCTCAGGTATGGAACCACGGTCATAACTAACATGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CCA 90 bp TTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGAGAATTGCCACTTTTaGATCGACAGCATTGTCGGA +
Preference number: 4 (lower is better)
Translates to: FKPQMLLLLACINTARKNENCHF*IDSIVG
Trigger: TCCGACAATGCTGTCGATCCAAAAGTGGCAATTCTC...GTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp TTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGACTGTTCTTCCTCTGCCCTaGTCTTTACATACTGATCAA +
Preference number: 4 (lower is better)
Translates to: LLLACINTARKNVTKSLTVLPLP*SLHTDQ
Trigger: TTGATCAGTATGTAAAGACCAGGGCAGAGGAAGAAC...AGTCAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR TCA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAGTCAGTTCTGATTGCTaGATAACCTTAACTCCATCT +
Preference number: 4 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGVSSDC*ITLTPS
Trigger: AGATGGAGTTAAGGTTATTCAGCAATCAGAACTGAC...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR TCA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGACATAGGTGTCAGTTCTaGTTGCTGAATAACCTTAAC +
Preference number: 4 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGHRCQF*LLNNLN
Trigger: GTTAAGGTTATTCAGCAATCAGAACTGACACCTATG...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR TCA 90 bp CAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGCTGGTCTTTACATACTaGTCAAACACCTGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: QMLLLLACINTARKNVTKLVFTY*SNTCFL
Trigger: GAGAAAACAGGTGTTTGATCAGTATGTAAAGACCAG...CTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR TCA 90 bp ATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCAGAGACAGCCTATATTTaGGTATGTATGTCAGTCATG +
Preference number: 4 (lower is better)
Translates to: MLLLLACINTARKNVTKSETAYI*VCMSVM
Trigger: CATGACTGACATACATACTCAAATATAGGCTGTCTC...TGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR TCA 90 bp TTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACATGTACACGACATGTTaGAAGAATGCCAAAAAGGCG +
Preference number: 4 (lower is better)
Translates to: FKPQMLLLLACINTARKNMYTTC*KNAKKA
Trigger: CGCCTTTTTGGCATTCTTTCAACATGTCGTGTACAT...GTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR GCA 90 bp CACTTAATGGTGAATAAAATATGTTTAACCAGTGGTTCTATTCTGGCCAACATGTGTCAACATCTGCCCTaGCAATCAGATCATCAGGTC +
Preference number: 4 (lower is better)
Translates to: HLMVNKICLTSGSILANMCQHLP*QSDHQV
Trigger: GACCTGATGATCTGATTGGCAGGGCAGATGTTGACA...CATGTTGGCCAGAATAGAACCACTGGTTAAACATATTTTATTCACCATTAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR GCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGTGTCAACATCTGCCCTaGCAATCAGATCATCAGGTC +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLCQHLP*QSDHQV
Trigger: GACCTGATGATCTGATTGGCAGGGCAGATGTTGACA...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR GCA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAATTTTGTCAACATCTaGCCTGCCAATCAGATCATC +
Preference number: 4 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGNFVNI*PANQII
Trigger: GATGATCTGATTGGCAGGGCAGATGTTGACAAAATT...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp CAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGCTTTGTCTTTTACTTTaGTCCATCGAGACTGACTGT +
Preference number: 4 (lower is better)
Translates to: QMLLLLACINTARKNVTKLCLLL*SIETDC
Trigger: ACAGTCAGTCTCGATGGAGCAAAGTAAAAGACAAAG...CTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp TTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGACTCTTTGTCTTTTACTTTaGTCCATCGAGACTGACTGT +
Preference number: 4 (lower is better)
Translates to: LLLACINTARKNVTKSLTLCLLL*SIETDC
Trigger: ACAGTCAGTCTCGATGGAGCAAAGTAAAAGACAAAG...AGTCAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp TTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACTCTTCTCGTTTGTGCTaGTCTCTCTCTCGATCTATT +
Preference number: 4 (lower is better)
Translates to: FKPQMLLLLACINTARKNSSRLC*SLSRSI
Trigger: AATAGATCGAGAGAGAGAGCAGCACAAACGAGAAGA...GTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp CAGCCTATATTTGAGTATGTATGTCAGTCATGCCACACAAAGAAAAGCATAAATACCCCAGCATCTTCTTaGTATGAGGCAATAAGGCAC +
Preference number: 4 (lower is better)
Translates to: QPIFEYVCQSCHTKKSINTPASS*YEAIRH
Trigger: GTGCCTTATTGCCTCATAGCAAGAAGATGCTGGGGT...ATTTATGCTTTTCTTTGTGTGGCATGACTGACATACATACTCAAATATAGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CCA 90 bp CACTTAATGGTGAATAAAATATGTTTAACCAGTGGTTCTATTCTGGCCAACATGTCCTGGAGGAGGCATTaGCGGCATATTAGGATCAAA +
Preference number: 4 (lower is better)
Translates to: HLMVNKICLTSGSILANMSWRRH*RHIRIK
Trigger: TTTGATCCTAATATGCCGCCAATGCCTCCTCCAGGA...CATGTTGGCCAGAATAGAACCACTGGTTAAACATATTTTATTCACCATTAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGATGATGATGTTGAAGTaGATACTGCAGGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLMMMLK*ILQVLG
Trigger: GCCCAGCACCTGCAGTATCCACTTCAACATCATCAT...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CCA 90 bp TTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACAGGTACCATTACTGGTaGAAAAGCAGGTATTGCTGT +
Preference number: 4 (lower is better)
Translates to: FKPQMLLLLACINTARKNRYHYW*KSRYCC
Trigger: ACAGCAATACCTGCTTTTCCACCAGTAATGGTACCT...GTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp CGACATGTTGAAAGAATGCCAAAAAGGCGCAAACCATCATACATTAATACAAAGGAGAATTGCCACTTTTaGATCGACAGCATTGTCGGA +
Preference number: 4 (lower is better)
Translates to: RHVERMPKRRKPSYINTKENCHF*IDSIVG
Trigger: TCCGACAATGCTGTCGATCCAAAAGTGGCAATTCTC...CTTTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACATGTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CCA 90 bp CTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGAGAGCTTTGAAATTCTaGATAGCTTCTTCTCGTTTG +
Preference number: 4 (lower is better)
Translates to: LLLLACINTARKNVTKSLRALKF*IASSRL
Trigger: CAAACGAGAAGAAGCTATCCAGAATTTCAAAGCTCT...CAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp CAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTTAGGAACTGATTCATaGTGTGATGTACACGACATG +
Preference number: 4 (lower is better)
Translates to: QMLLLLACINTARKNVTKLGTDS*CDVHDM
Trigger: CATGTCGTGTACATCACACCATGAATCAGTTCCTAA...CTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CCA 90 bp CAGCCTATATTTGAGTATGTATGTCAGTCATGCCACACAAAGAAAAGCATAAATCAATACACCTGGAAGTaGAATTGGCATGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QPIFEYVCQSCHTKKSINQYTWK*NWHARK
Trigger: CTTCCTGGCATGCCAATTCCACTTCCAGGTGTATTG...ATTTATGCTTTTCTTTGTGTGGCATGACTGACATACATACTCAAATATAGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394421.7
3UTR CAA 72 bp TTAGGAACTGATTCATGGTGTGATGTACACGACATGTaGAAAGAATGCCAAAAAGGCGCAAACCATCATACA +
Preference number: 4 (lower is better)
Translates to: LGTDSWCDVHDM*KECQKGANHHT
Trigger: TGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACATGTCGTGTACATCACACCATGAATCAGTTCCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000679501.1
CDS-3UTR TCA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACCATAGGTGTCAGTTCTaGTTGCTGAATAACCTTAAC +
Preference number: 4 (lower is better)
Translates to: FASGKFKPQMLLLLACINHRCQF*LLNNLN
Trigger: GTTAAGGTTATTCAGCAATCAGAACTGACACCTATG...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR TCA 90 bp ATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCAAATTGCTTTGAATCTTaGATCTTTAGCATGCTTGGC +
Preference number: 4 (lower is better)
Translates to: MLLLLACINTARKNVTKSNCFES*IFSMLG
Trigger: GCCAAGCATGCTAAAGATTCAAGATTCAAAGCAATT...TGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR TCA 90 bp ATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCAGGTTTCGCAATAGGTTaGCTAATGCACATATATGTA +
Preference number: 4 (lower is better)
Translates to: MLLLLACINTARKNVTKSGFAIG*LMHIYV
Trigger: TACATATATGTGCATTAGTCAACCTATTGCGAAACC...TGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR TCA 90 bp CAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGGGTTTCGCAATAGGTTaGCTAATGCACATATATGTA +
Preference number: 4 (lower is better)
Translates to: QMLLLLACINTARKNVTKGFAIG*LMHIYV
Trigger: TACATATATGTGCATTAGTCAACCTATTGCGAAACC...CTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR TCA 90 bp CAATTAGGAACTGATTCATGGTGTGATGTACACGACATGTTGAAAGAATGCCAAGAGACAGCCTATATTTaGGTATGTATGTCAGTCATG +
Preference number: 4 (lower is better)
Translates to: QLGTDSWCDVHDMLKECQETAYI*VCMSVM
Trigger: CATGACTGACATACATACTCAAATATAGGCTGTCTC...TTGGCATTCTTTCAACATGTCGTGTACATCACACCATGAATCAGTTCCTAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR TCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGACGTCACCAAGTCACTaGCTTCCACACCTCATAAAA +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLTSPSH*LPHLIK
Trigger: TTTTATGAGGTGTGGAAGTCAGTGACTTGGTGACGT...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp CAGCCTATATTTGAGTATGTATGTCAGTCATGCCACACAAAGAAAAGCATAAATGGTGTTGATACTGTCTaGGCAACTGAAGTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: QPIFEYVCQSCHTKKSINGVDTV*ATEVAV
Trigger: AACTGCTACTTCAGTTGCGCAGACAGTATCAACACC...ATTTATGCTTTTCTTTGTGTGGCATGACTGACATACATACTCAAATATAGGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGGGTGTTGATACTGTCTaGGCAACTGAAGTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLGVDTV*ATEVAV
Trigger: AACTGCTACTTCAGTTGCGCAGACAGTATCAACACC...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR GCA 90 bp CGACATGTTGAAAGAATGCCAAAAAGGCGCAAACCATCATACATTAATACAAAGATTGTCGGAGTTGGGTaGCTTAGTTTCTTCAATTCC +
Preference number: 4 (lower is better)
Translates to: RHVERMPKRRKPSYINTKIVGVG*LSFFNS
Trigger: GGAATTGAAGAAACTAAGGCACCCAACTCCGACAAT...CTTTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACATGTCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR GCA 90 bp CACTTAATGGTGAATAAAATATGTTTAACCAGTGGTTCTATTCTGGCCAACATGGCACTCATAGAGAATTaGCACTTTTGGATCGACAGC +
Preference number: 4 (lower is better)
Translates to: HLMVNKICLTSGSILANMALIEN*HFWIDS
Trigger: GCTGTCGATCCAAAAGTGGCAATTCTCTATGAGTGC...CATGTTGGCCAGAATAGAACCACTGGTTAAACATATTTTATTCACCATTAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR GCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGGCACTCATAGAGAATTaGCACTTTTGGATCGACAGC +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLALIEN*HFWIDS
Trigger: GCTGTCGATCCAAAAGTGGCAATTCTCTATGAGTGC...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR GCA 90 bp GCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTCTTGAATCTTTAGCATaGTTGGCTGCAAATTCACTA +
Preference number: 4 (lower is better)
Translates to: ASGKFKPQMLLLLACINTLESLA*LAANSL
Trigger: TAGTGAATTTGCAGCCAAGCATGCTAAAGATTCAAG...AGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp GCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTAGTTCAAGCCACAAATaGTCTTACTTCTTGCATGTA +
Preference number: 4 (lower is better)
Translates to: ASGKFKPQMLLLLACINTSSSHK*SYFLHV
Trigger: TACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACT...AGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp CAACATGTTAGTTATGACCGTGGTTCCATACCTGAGAAGAAATTACTACATAAAAACCTTAACTCCATCTaGCTTGGTCCATGCAGATTC +
Preference number: 4 (lower is better)
Translates to: QHVSYDRGSIPEKKLLHKNLNSI*LGPCRF
Trigger: GAATCTGCATGGACCAAGCCAGATGGAGTTAAGGTT...TTTATGTAGTAATTTCTTCTCAGGTATGGAACCACGGTCATAACTAACATGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CCA 90 bp ATGTTGAAAGAATGCCAAAAAGGCGCAAACCATCATACATTAATACAAAGGACATCTGATCTTGTGTTGTaGGTGTTGATACTGTCTGCG +
Preference number: 4 (lower is better)
Translates to: MLKECQKGANHHTLIQRTSDLVL*VLILSA
Trigger: CGCAGACAGTATCAACACCCACAACACAAGATCAGA...TGTCCTTTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGTCTGATCTTGTGTTGTaGGTGTTGATACTGTCTGCG +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLSDLVL*VLILSA
Trigger: CGCAGACAGTATCAACACCCACAACACAAGATCAGA...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CCA 90 bp CGACATGTTGAAAGAATGCCAAAAAGGCGCAAACCATCATACATTAATACAAAGAGGTACCATTACTGGTaGAAAAGCAGGTATTGCTGT +
Preference number: 4 (lower is better)
Translates to: RHVERMPKRRKPSYINTKRYHYW*KSRYCC
Trigger: ACAGCAATACCTGCTTTTCCACCAGTAATGGTACCT...CTTTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACATGTCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CCA 90 bp CTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGAGAGGGTTCTTTAATTaGCTCTTTAATCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LLLLACINTARKNVTKSLRGFFN*LFNLLF
Trigger: GAAGAGAAGATTAAAGAGCCAATTAAAGAACCCTCT...CAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGGAGAATTGCCACTTTTaGATCGACAGCATTGTCGGA +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLENCHF*IDSIVG
Trigger: TCCGACAATGCTGTCGATCCAAAAGTGGCAATTCTC...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR GCA 90 bp CAGCCTATATTTGAGTATGTATGTCAGTCATGCCACACAAAGAAAAGCATAAATATTGTCGGAGTTGGGTaGCTTAGTTTCTTCAATTCC +
Preference number: 4 (lower is better)
Translates to: QPIFEYVCQSCHTKKSINIVGVG*LSFFNS
Trigger: GGAATTGAAGAAACTAAGGCACCCAACTCCGACAAT...ATTTATGCTTTTCTTTGTGTGGCATGACTGACATACATACTCAAATATAGGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp TTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGACTTTGTTCCTCTTTAATTaGACTCATAGAGAATTGCCA +
Preference number: 4 (lower is better)
Translates to: LLLACINTARKNVTKSLTLFLFN*THRELP
Trigger: TGGCAATTCTCTATGAGTGCAATTAAAGAGGAACAA...AGTCAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACTTTAGCATGCTTGGCTaGAAATTCACTAAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: FASGKFKPQMLLLLACINFSMLG*KFTKSC
Trigger: GCAACTTTTAGTGAATTTGCAGCCAAGCATGCTAAA...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp CAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGATAAACCTTCCCATCTaGAGTTTTATTTTCAACCCA +
Preference number: 4 (lower is better)
Translates to: QMLLLLACINTARKNVTKINLPI*SFIFNP
Trigger: TGGGTTGAAAATAAAACTCCAGATGGGAAGGTTTAT...CTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGAGGTACCATTACTGGTaGAAAAGCAGGTATTGCTGT +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLRYHYW*KSRYCC
Trigger: ACAGCAATACCTGCTTTTCCACCAGTAATGGTACCT...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CCA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACTTTTCCTTTAGTTCTTaGGGTTTTTCCCAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: FASGKFKPQMLLLLACINFSFSS*GFSQVD
Trigger: ATCAACCTGGGAAAAACCCCAAGAACTAAAGGAAAA...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CCA 90 bp CACTTAATGGTGAATAAAATATGTTTAACCAGTGGTTCTATTCTGGCCAACATGGTTCTTCCTCTGCCCTaGTCTTTACATACTGATCAA +
Preference number: 4 (lower is better)
Translates to: HLMVNKICLTSGSILANMVLPLP*SLHTDQ
Trigger: TTGATCAGTATGTAAAGACCAGGGCAGAGGAAGAAC...CATGTTGGCCAGAATAGAACCACTGGTTAAACATATTTTATTCACCATTAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CCA 90 bp TTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGACTAACATTTTATTTATGTaGCACTCTGAAACGAGCAAC +
Preference number: 4 (lower is better)
Translates to: LLLACINTARKNVTKSLTNILFM*HSETSN
Trigger: GTTGCTCGTTTCAGAGTGCCACATAAATAAAATGTT...AGTCAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR TCA 90 bp ATGTTGAAAGAATGCCAAAAAGGCGCAAACCATCATACATTAATACAAAGGACAGTCAGTTCTGATTGCTaGATAACCTTAACTCCATCT +
Preference number: 4 (lower is better)
Translates to: MLKECQKGANHHTLIQRTVSSDC*ITLTPS
Trigger: AGATGGAGTTAAGGTTATTCAGCAATCAGAACTGAC...TGTCCTTTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR TCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGGTCAGTTCTGATTGCTaGATAACCTTAACTCCATCT +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLVSSDC*ITLTPS
Trigger: AGATGGAGTTAAGGTTATTCAGCAATCAGAACTGAC...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR TCA 90 bp CAGCCTATATTTGAGTATGTATGTCAGTCATGCCACACAAAGAAAAGCATAAATCTGGTCTTTACATACTaGTCAAACACCTGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: QPIFEYVCQSCHTKKSINLVFTY*SNTCFL
Trigger: GAGAAAACAGGTGTTTGATCAGTATGTAAAGACCAG...ATTTATGCTTTTCTTTGTGTGGCATGACTGACATACATACTCAAATATAGGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR TCA 90 bp GACATGTTGAAAGAATGCCAAAAAGGCGCAAACCATCATACATTAATACAAAGGAATTGCTTTGAATCTTaGATCTTTAGCATGCTTGGC +
Preference number: 4 (lower is better)
Translates to: DMLKECQKGANHHTLIQRNCFES*IFSMLG
Trigger: GCCAAGCATGCTAAAGATTCAAGATTCAAAGCAATT...CCTTTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACATGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR GCA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACTTGTTCCTCTTTAATTaGACTCATAGAGAATTGCCA +
Preference number: 4 (lower is better)
Translates to: FASGKFKPQMLLLLACINLFLFN*THRELP
Trigger: TGGCAATTCTCTATGAGTGCAATTAAAGAGGAACAA...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp CACTTAATGGTGAATAAAATATGTTTAACCAGTGGTTCTATTCTGGCCAACATGGTTTCATCCAGAAGTTaGCTAAAGTGCTCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: HLMVNKICLTSGSILANMVSSRS*LKCSLF
Trigger: AAAGAGAGAGCACTTTAGGCAACTTCTGGATGAAAC...CATGTTGGCCAGAATAGAACCACTGGTTAAACATATTTTATTCACCATTAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR GCA 90 bp CAATTAGGAACTGATTCATGGTGTGATGTACACGACATGTTGAAAGAATGCCAATATGTATGTCAGTCATaGCACACAAAGAAAAGCATA +
Preference number: 4 (lower is better)
Translates to: QLGTDSWCDVHDMLKECQYVCQS*HTKKSI
Trigger: TATGCTTTTCTTTGTGTGGCATGACTGACATACATA...TTGGCATTCTTTCAACATGTCGTGTACATCACACCATGAATCAGTTCCTAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR GCA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACTATGTATGTCAGTCATaGCACACAAAGAAAAGCATA +
Preference number: 4 (lower is better)
Translates to: FASGKFKPQMLLLLACINYVCQS*HTKKSI
Trigger: TATGCTTTTCTTTGTGTGGCATGACTGACATACATA...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp GACATGTTGAAAGAATGCCAAAAAGGCGCAAACCATCATACATTAATACAAAGGAGTTCAAGCCACAAATaGTCTTACTTCTTGCATGTA +
Preference number: 4 (lower is better)
Translates to: DMLKECQKGANHHTLIQRSSSHK*SYFLHV
Trigger: TACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACT...CCTTTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACATGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR GCA 90 bp ATGTTGAAAGAATGCCAAAAAGGCGCAAACCATCATACATTAATACAAAGGACAGACATGTTGAAAGAATaGCAAAAAGGCGCAAACCAT +
Preference number: 4 (lower is better)
Translates to: MLKECQKGANHHTLIQRTDMLKE*QKGANH
Trigger: ATGGTTTGCGCCTTTTTGGCATTCTTTCAACATGTC...TGTCCTTTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CCA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACAGAGGGTTCTTTAATTaGCTCTTTAATCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: FASGKFKPQMLLLLACINRGFFN*LFNLLF
Trigger: GAAGAGAAGATTAAAGAGCCAATTAAAGAACCCTCT...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp CACTTAATGGTGAATAAAATATGTTTAACCAGTGGTTCTATTCTGGCCAACATGTTTAGCATGCTTGGCTaGAAATTCACTAAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: HLMVNKICLTSGSILANMFSMLG*KFTKSC
Trigger: GCAACTTTTAGTGAATTTGCAGCCAAGCATGCTAAA...CATGTTGGCCAGAATAGAACCACTGGTTAAACATATTTTATTCACCATTAAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR GCA 90 bp CAGCCTATATTTGAGTATGTATGTCAGTCATGCCACACAAAGAAAAGCATAAATCTTGAATCTTTAGCATaGTTGGCTGCAAATTCACTA +
Preference number: 4 (lower is better)
Translates to: QPIFEYVCQSCHTKKSINLESLA*LAANSL
Trigger: TAGTGAATTTGCAGCCAAGCATGCTAAAGATTCAAG...ATTTATGCTTTTCTTTGTGTGGCATGACTGACATACATACTCAAATATAGGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR GCA 90 bp CGACATGTTGAAAGAATGCCAAAAAGGCGCAAACCATCATACATTAATACAAAGAGCATTTTGAATAGATaGCCCTATGGAAGAGTATTT +
Preference number: 4 (lower is better)
Translates to: RHVERMPKRRKPSYINTKSILNR*PYGRVF
Trigger: AAATACTCTTCCATAGGGGCATCTATTCAAAATGCT...CTTTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACATGTCG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGTTTTCCTTTAGTTCTTaGGGTTTTTCCCAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLFSFSS*GFSQVD
Trigger: ATCAACCTGGGAAAAACCCCAAGAACTAAAGGAAAA...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR GCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGTTGTTCCTCTTTAATTaGACTCATAGAGAATTGCCA +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLLFLFN*THRELP
Trigger: TGGCAATTCTCTATGAGTGCAATTAAAGAGGAACAA...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CCA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGATAAACCTTCCCATCTaGAGTTTTATTTTCAACCCA +
Preference number: 4 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLINLPI*SFIFNP
Trigger: TGGGTTGAAAATAAAACTCCAGATGGGAAGGTTTAT...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS CCA 90 bp TGGAGGAGGTCGCATCAGAGGTGGTGGGCCTCGCATCACTGCATTTaGTGGGGGAGCCGGACCTCGGAACCTCAAGGCCTGCTGTTGGGC +
Preference number: 5 (lower is better)
Translates to: WRRSHQRWWASHHCI*WGSRTSEPQGLLLG
Trigger: GCCCAACAGCAGGCCTTGAGGTTCCGAGGTCCGGCTCCCCCACCAAATGCAGTGATGCGAGGCCCACCACCTCTGATGCGACCTCCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS CCA 90 bp AGGAGGTCGCATCAGAGGTGGTGGGCCTCGCATCACTGCATTTGGTaGGGGAGCCGGACCTCGGAACCTCAAGGCCTGCTGTTGGGCCAT +
Preference number: 5 (lower is better)
Translates to: RRSHQRWWASHHCIW*GSRTSEPQGLLLGH
Trigger: ATGGCCCAACAGCAGGCCTTGAGGTTCCGAGGTCCGGCTCCCCCACCAAATGCAGTGATGCGAGGCCCACCACCTCTGATGCGACCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS CCA 90 bp GGGCGGCCGTGGTGGTGGAGGAGGGCCTCGCATCATACCAAAAGGTaGAGGAGGTCGCATCAGAGGTGGTGGGCCTCGCATCACTGCATT +
Preference number: 5 (lower is better)
Translates to: GRPWWWRRASHHTKR*RRSHQRWWASHHCI
Trigger: AATGCAGTGATGCGAGGCCCACCACCTCTGATGCGACCTCCTCCACCTTTTGGTATGATGCGAGGCCCTCCTCCACCACCACGGCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS GCA 90 bp AAAAGGTGGAGGAGGTCGCATCAGAGGTGGTGGGCCTCGCATCACTaGATTTGGTGGGGGAGCCGGACCTCGGAACCTCAAGGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: KRWRRSHQRWWASHH*IWWGSRTSEPQGLL
Trigger: CAGCAGGCCTTGAGGTTCCGAGGTCCGGCTCCCCCACCAAATGCAGTGATGCGAGGCCCACCACCTCTGATGCGACCTCCTCCACCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS CCA 90 bp AGGGCCTCGCATCATACCAAAAGGTGGAGGAGGTCGCATCAGAGGTaGTGGGCCTCGCATCACTGCATTTGGTGGGGGAGCCGGACCTCG +
Preference number: 5 (lower is better)
Translates to: RASHHTKRWRRSHQR*WASHHCIWWGSRTS
Trigger: CGAGGTCCGGCTCCCCCACCAAATGCAGTGATGCGAGGCCCACCACCTCTGATGCGACCTCCTCCACCTTTTGGTATGATGCGAGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS CCA 90 bp GCCTCGCATCATACCAAAAGGTGGAGGAGGTCGCATCAGAGGTGGTaGGCCTCGCATCACTGCATTTGGTGGGGGAGCCGGACCTCGGAA +
Preference number: 5 (lower is better)
Translates to: ASHHTKRWRRSHQRW*ASHHCIWWGSRTSE
Trigger: TTCCGAGGTCCGGCTCCCCCACCAAATGCAGTGATGCGAGGCCCACCACCTCTGATGCGACCTCCTCCACCTTTTGGTATGATGCGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS CCA 90 bp GTGTGGAGGGCCCATAGGTGGAGGTATCCCTCCTGGAGGAGGCATTaGCGGCATATTAGGATCAAAAGGAGGACGTCCAAAGGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: VWRAHRWRYPSWRRH*RHIRIKRRTSKGRP
Trigger: CGGCCGCCCTTTGGACGTCCTCCTTTTGATCCTAATATGCCGCCAATGCCTCCTCCAGGAGGGATACCTCCACCTATGGGCCCTCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS CCA 90 bp CGGCATATTAGGATCAAAAGGAGGACGTCCAAAGGGCGGCCGTGGTaGTGGAGGAGGGCCTCGCATCATACCAAAAGGTGGAGGAGGTCG +
Preference number: 5 (lower is better)
Translates to: RHIRIKRRTSKGRPW*WRRASHHTKRWRRS
Trigger: CGACCTCCTCCACCTTTTGGTATGATGCGAGGCCCTCCTCCACCACCACGGCCGCCCTTTGGACGTCCTCCTTTTGATCCTAATATGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS CCA 90 bp TGGCGGCATATTAGGATCAAAAGGAGGACGTCCAAAGGGCGGCCGTaGTGGTGGAGGAGGGCCTCGCATCATACCAAAAGGTGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: WRHIRIKRRTSKGRP*WWRRASHHTKRWRR
Trigger: CCTCCTCCACCTTTTGGTATGATGCGAGGCCCTCCTCCACCACCACGGCCGCCCTTTGGACGTCCTCCTTTTGATCCTAATATGCCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS CCA 90 bp TGGTCTCTGGAGGTGTGGAGGGCCCATAGGTGGAGGTATCCCTCCTaGAGGAGGCATTGGCGGCATATTAGGATCAAAAGGAGGACGTCC +
Preference number: 5 (lower is better)
Translates to: WSLEVWRAHRWRYPS*RRHWRHIRIKRRTS
Trigger: GGACGTCCTCCTTTTGATCCTAATATGCCGCCAATGCCTCCTCCAGGAGGGATACCTCCACCTATGGGCCCTCCACACCTCCAGAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS-3UTR CAA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACCTCGCATCACTGCATTaGGTGGGGGAGCCGGACCTC +
Preference number: 5 (lower is better)
Translates to: INICHNQFTPLLWHTVQYLASLH*VGEPDL
Trigger: GAGGTCCGGCTCCCCCACCAAATGCAGTGATGCGAG...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS CCA 90 bp GCTGTTGCTCCAGCTAAGGTAGCAGGTGAAGCTGCAATAGCAACCTaGGGATGTATCATGGGTACGATAGGAGGGGCCATTCCTGGCAAT +
Preference number: 5 (lower is better)
Translates to: AVAPAKVAGEAAIAT*GCIMGTIGGAIPGN
Trigger: ATTGCCAGGAATGGCCCCTCCTATCGTACCCATGATACATCCCCAGGTTGCTATTGCAGCTTCACCTGCTACCTTAGCTGGAGCAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000510724.1
ENST00000513298.5
ENST00000549332.1
ENST00000679501.2
CDS-3UTR CAA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACTGCTTGTGCTTGCACTaGTGCCTGGACCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: INICHNQFTPLLWHTVQYCLCLH*CLDLGL
Trigger: CAGGCCCAGGTCCAGGCACAAGTGCAAGCACAAGCA...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CAA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCTCCAACTGCTTGTGCTaGCACTTGTGCCTGGACCTG +
Preference number: 5 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPISNCLC*HLCLDL
Trigger: CAGGTCCAGGCACAAGTGCAAGCACAAGCAGTTGGA...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CAA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACCCTCCTCCGTCTCCATaGGCAGAGGCTCTTCAGAGG +
Preference number: 5 (lower is better)
Translates to: INICHNQFTPLLWHTVQYPPPSP*AEALQR
Trigger: CCTCTGAAGAGCCTCTGCCAATGGAGACGGAGGAGG...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CAA 90 bp CTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGCCTCAAGGCCTGCTGTaGGGCCATCCTGAGCTCCCC +
Preference number: 5 (lower is better)
Translates to: LLLLACINTARKNVTKSLPQGLL*GHPELP
Trigger: GGGGAGCTCAGGATGGCCCAACAGCAGGCCTTGAGG...CAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCGGAAGCTCCAACTGCTaGTGCTTGCACTTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: RSSTYATISLRLSSGTQSGSSNC*CLHLCL
Trigger: CAGGCACAAGTGCAAGCACAAGCAGTTGGAGCTTCC...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CAA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCGGCAATACACCGGTCTaGGTGGTAGCGACTGTCTTT +
Preference number: 5 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPIGNTPV*VVATVF
Trigger: AAAGACAGTCGCTACCACCAAGACCGGTGTATTGCC...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS TCA 90 bp CTGAGCCTGAACCTGTGCCTGGGCTGCAAGCATAGGTGTCAGTTCTaGTTGCTGAATAACCTTAACTCCATCTGGCTTGGTCCATGCAGA +
Preference number: 5 (lower is better)
Translates to: LSLNLCLGCKHRCQF*LLNNLNSIWLGPCR
Trigger: TCTGCATGGACCAAGCCAGATGGAGTTAAGGTTATTCAGCAATCAGAACTGACACCTATGCTTGCAGCCCAGGCACAGGTTCAGGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS-3UTR CAA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGACCTCAAGGCCTGCTGTaGGGCCATCCTGAGCTCCCC +
Preference number: 5 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGPQGLL*GHPELP
Trigger: GGGGAGCTCAGGATGGCCCAACAGCAGGCCTTGAGG...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACCACCTGGAAGTGGAATaGGCATGCCAGGAAGGGGAA +
Preference number: 5 (lower is better)
Translates to: INICHNQFTPLLWHTVQYHLEVE*ACQEGE
Trigger: TTCCCCTTCCTGGCATGCCAATTCCACTTCCAGGTG...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CAA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCTTTGGATCGACAGCATaGTCGGAGTTGGGTGCCTTA +
Preference number: 5 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPIFGSTA*SELGAL
Trigger: TAAGGCACCCAACTCCGACAATGCTGTCGATCCAAA...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CAA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCTGCCTCAATGCGGGCTaGCCTTTCAAGCTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: RSSTYATISLRLSSGTQSCLNAG*PFKLLF
Trigger: GAAAAGGAGCTTGAAAGGCAAGCCCGCATTGAGGCA...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CAA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGACTGAGCTCCCCCGGGTaGAATCGTTCACTCTCGCCC +
Preference number: 5 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGLSSPG*NRSLSP
Trigger: GGGCGAGAGTGAACGATTCAACCCGGGGGAGCTCAG...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp GCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTCTCGCATCACTGCATTaGGTGGGGGAGCCGGACCTC +
Preference number: 5 (lower is better)
Translates to: ASGKFKPQMLLLLACINTLASLH*VGEPDL
Trigger: GAGGTCCGGCTCCCCCACCAAATGCAGTGATGCGAG...AGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCCTTGTGTTGTGGGTGTaGATACTGTCTGCGCAACTG +
Preference number: 5 (lower is better)
Translates to: RSSTYATISLRLSSGTQSLVLWV*ILSAQL
Trigger: CAGTTGCGCAGACAGTATCAACACCCACAACACAAG...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CAA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCGGGTCTGATCTTGTGTaGTGGGTGTTGATACTGTCT +
Preference number: 5 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPIGSDLV*WVLILS
Trigger: AGACAGTATCAACACCCACAACACAAGATCAGACCC...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CAA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCTCTAGCAGCATGTCCTaGAACTGCTTCATTCGAGCC +
Preference number: 5 (lower is better)
Translates to: RSSTYATISLRLSSGTQSSSSMS*NCFIRA
Trigger: GGCTCGAATGAAGCAGTTCAAGGACATGCTGCTAGA...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CAA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCATAGCTTCTTCTCGTTaGTGCTGCTCTCTCTCTCGA +
Preference number: 5 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPIIASSR*CCSLSR
Trigger: TCGAGAGAGAGAGCAGCACAAACGAGAAGAAGCTAT...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CAA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCCAGGTATTGCTGTTGTaGGCTGAGGTACTGAATGAG +
Preference number: 5 (lower is better)
Translates to: RSSTYATISLRLSSGTQSQVLLL*AEVLNE
Trigger: CTCATTCAGTACCTCAGCCAACAACAGCAATACCTG...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CAA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCAAGCAGGTATTGCTGTaGTTGGCTGAGGTACTGAAT +
Preference number: 5 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPIKQVLL*LAEVLN
Trigger: ATTCAGTACCTCAGCCAACAACAGCAATACCTGCTT...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CAA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCGTGGAAAAGCAGGTATaGCTGTTGTTGGCTGAGGTA +
Preference number: 5 (lower is better)
Translates to: RSSTYATISLRLSSGTQSVEKQV*LLLAEV
Trigger: TACCTCAGCCAACAACAGCAATACCTGCTTTTCCAC...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CAA 90 bp CAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGCCTCCTCCGTCTCCATaGGCAGAGGCTCTTCAGAGG +
Preference number: 5 (lower is better)
Translates to: QMLLLLACINTARKNVTKPPPSP*AEALQR
Trigger: CCTCTGAAGAGCCTCTGCCAATGGAGACGGAGGAGG...CTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp GCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTCCTCCTCCGTCTCCATaGGCAGAGGCTCTTCAGAGG +
Preference number: 5 (lower is better)
Translates to: ASGKFKPQMLLLLACINTPPPSP*AEALQR
Trigger: CCTCTGAAGAGCCTCTGCCAATGGAGACGGAGGAGG...AGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp AGGTCATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGAGAATTGCCACTTTaGGATCGACAGCATTGTCGG +
Preference number: 5 (lower is better)
Translates to: RSSTYATISLRLSSGTQSRELPL*DRQHCR
Trigger: CCGACAATGCTGTCGATCCAAAAGTGGCAATTCTCT...GGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CAA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCGGATCAAAAACTATCTaGTGCAACTCCTTCTCCCAC +
Preference number: 5 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPIGSKTI*CNSFSH
Trigger: GTGGGAGAAGGAGTTGCACAAGATAGTTTTTGATCC...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS TCA 90 bp TCTCTCTCTCGATCTATTTCTTTTGTTTGTTCTGAACGGGCCTTTTaGACCTCCCTTTCTCGTTCTCGAAGGCTTGCCTCAATGCGGGCT +
Preference number: 5 (lower is better)
Translates to: SLSRSISFVCSERAF*TSLSRSRRLASMRA
Trigger: AGCCCGCATTGAGGCAAGCCTTCGAGAACGAGAAAGGGAGGTTCAAAAGGCCCGTTCAGAACAAACAAAAGAAATAGATCGAGAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000503741.5
ENST00000506524.5
ENST00000509787.1
ENST00000514567.5
ENST00000514719.1
ENST00000549332.1
ENST00000679501.2
CDS-3UTR CAA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACTTAACTCCATCTGGCTaGGTCCATGCAGATTCACGT +
Preference number: 5 (lower is better)
Translates to: INICHNQFTPLLWHTVQYLTPSG*VHADSR
Trigger: ACGTGAATCTGCATGGACCAAGCCAGATGGAGTTAA...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CAA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACACAGCATTGTCGGAGTaGGGTGCCTTAGTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: INICHNQFTPLLWHTVQYTALSE*GALVSS
Trigger: TGAAGAAACTAAGGCACCCAACTCCGACAATGCTGT...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CAA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCTTTAGAATTATTTTGTaGATCGTCTCGTGGGCTCCG +
Preference number: 5 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPIFRIIL*IVSWAP
Trigger: CGGAGCCCACGAGACGATCAACAAAATAATTCTAAA...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS CCA 90 bp CCTCCAAAAATGCACCTCAGGTGTAAGGGCAACCCTGTTTCTGTGTaGTACTCAAGTGAAATTGTAAACATGGAATCACGGCACCTCTCA +
Preference number: 5 (lower is better)
Translates to: PPKMHLRCKGNPVSV*YSSEIVNMESRHLS
Trigger: TGAGAGGTGCCGTGATTCCATGTTTACAATTTCACTTGAGTACCACACAGAAACAGGGTTGCCCTTACACCTGAGGTGCATTTTTGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506524.5
CDS-3UTR CAA 90 bp CAGCCTATATTTGAGTATGTATGTCAGTCATGCCACACAAAGAAAAGCATAAATCTGAGCTCCCCCGGGTaGAATCGTTCACTCTCGCCC +
Preference number: 5 (lower is better)
Translates to: QPIFEYVCQSCHTKKSINLSSPG*NRSLSP
Trigger: GGGCGAGAGTGAACGATTCAACCCGGGGGAGCTCAG...ATTTATGCTTTTCTTTGTGTGGCATGACTGACATACATACTCAAATATAGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGCTGAGCTCCCCCGGGTaGAATCGTTCACTCTCGCCC +
Preference number: 5 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLLSSPG*NRSLSP
Trigger: GGGCGAGAGTGAACGATTCAACCCGGGGGAGCTCAG...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CAA 90 bp CAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCCAACTGCTTGTGCTaGCACTTGTGCCTGGACCTG +
Preference number: 5 (lower is better)
Translates to: QMLLLLACINTARKNVTKSNCLC*HLCLDL
Trigger: CAGGTCCAGGCACAAGTGCAAGCACAAGCAGTTGGA...CTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAGGAAGCTCCAACTGCTaGTGCTTGCACTTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGGSSNC*CLHLCL
Trigger: CAGGCACAAGTGCAAGCACAAGCAGTTGGAGCTTCC...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp CAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGCACCTGGAAGTGGAATaGGCATGCCAGGAAGGGGAA +
Preference number: 5 (lower is better)
Translates to: QMLLLLACINTARKNVTKHLEVE*ACQEGE
Trigger: TTCCCCTTCCTGGCATGCCAATTCCACTTCCAGGTG...CTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp TTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGACTCACCTGGAAGTGGAATaGGCATGCCAGGAAGGGGAA +
Preference number: 5 (lower is better)
Translates to: LLLACINTARKNVTKSLTHLEVE*ACQEGE
Trigger: TTCCCCTTCCTGGCATGCCAATTCCACTTCCAGGTG...AGTCAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACTGCACTCATAGAGAATaGCCACTTTTGGATCGACAG +
Preference number: 5 (lower is better)
Translates to: INICHNQFTPLLWHTVQYCTHRE*PLLDRQ
Trigger: CTGTCGATCCAAAAGTGGCAATTCTCTATGAGTGCA...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS-3UTR CAA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGTGCTTGTGCTTGCACTaGTGCCTGGACCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLCLCLH*CLDLGL
Trigger: CAGGCCCAGGTCCAGGCACAAGTGCAAGCACAAGCA...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CAA 90 bp CAGCCTATATTTGAGTATGTATGTCAGTCATGCCACACAAAGAAAAGCATAAATTGCTTGTGCTTGCACTaGTGCCTGGACCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: QPIFEYVCQSCHTKKSINCLCLH*CLDLGL
Trigger: CAGGCCCAGGTCCAGGCACAAGTGCAAGCACAAGCA...ATTTATGCTTTTCTTTGTGTGGCATGACTGACATACATACTCAAATATAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp TTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGACTACTCCTTCTCCCACGTaGAAAAAGCAGACACCCCTC +
Preference number: 5 (lower is better)
Translates to: LLLACINTARKNVTKSLTTPSPT*KKQTPL
Trigger: GAGGGGTGTCTGCTTTTTCAACGTGGGAGAAGGAGT...AGTCAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp TTTGGATCTGTTCTGTGGATGAACAGAGGACTTCAGTCTGCGGGGCTGCCAATCTGGTTTCGCAATAGGTaGACTAATGCACATATATGT +
Preference number: 5 (lower is better)
Translates to: FGSVLWMNRGLQSAGLPIWFRNR*TNAHIC
Trigger: ACATATATGTGCATTAGTCAACCTATTGCGAAACCA...GATTGGCAGCCCCGCAGACTGAAGTCCTCTGTTCATCCACAGAACAGATCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS GCA 90 bp AGGGGTAAGGGAGAAAGATTTTCAACAAAGTTTCAGGGTATCTCCTaGAGTCAGTTACACCTCCAGTCCTACAATCTCATACCATCTGCA +
Preference number: 5 (lower is better)
Translates to: RGKGERFSTKFQGIS*SQLHLQSYNLIPSA
Trigger: TGCAGATGGTATGAGATTGTAGGACTGGAGGTGTAACTGACTGCAGGAGATACCCTGAAACTTTGTTGAAAATCTTTCTCCCTTACCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514567.5
CDS-3UTR CAA 90 bp TTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGACTGGGTGGATGATGATGTaGAAGTGGATACTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: LLLACINTARKNVTKSLTGWMMM*KWILQV
Trigger: CACCTGCAGTATCCACTTCAACATCATCATCCACCC...AGTCAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGACTTGTGTTGTGGGTGTaGATACTGTCTGCGCAACTG +
Preference number: 5 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGLVLWV*ILSAQL
Trigger: CAGTTGCGCAGACAGTATCAACACCCACAACACAAG...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACCGGGCAGCTGACTATTaGCATCATTGCTACACCTGG +
Preference number: 5 (lower is better)
Translates to: FASGKFKPQMLLLLACINRAADY*HHCYTW
Trigger: CCAGGTGTAGCAATGATGCAAATAGTCAGCTGCCCG...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CAA 90 bp CAATTAGGAACTGATTCATGGTGTGATGTACACGACATGTTGAAAGAATGCCAAGGCAATACACCGGTCTaGGTGGTAGCGACTGTCTTT +
Preference number: 5 (lower is better)
Translates to: QLGTDSWCDVHDMLKECQGNTPV*VVATVF
Trigger: AAAGACAGTCGCTACCACCAAGACCGGTGTATTGCC...TTGGCATTCTTTCAACATGTCGTGTACATCACACCATGAATCAGTTCCTAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CAA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAGTCATCTCCTCTTCTTaGGGCTCCTCCTTTATCTCC +
Preference number: 5 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGVISSS*GSSFIS
Trigger: GGAGATAAAGGAGGAGCCCAAAGAAGAGGAGATGAC...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGATTTGGATCGACAGCATaGTCGGAGTTGGGTGCCTTA +
Preference number: 5 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGFGSTA*SELGAL
Trigger: TAAGGCACCCAACTCCGACAATGCTGTCGATCCAAA...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp ATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCATCTAGCAGCATGTCCTaGAACTGCTTCATTCGAGCC +
Preference number: 5 (lower is better)
Translates to: MLLLLACINTARKNVTKSSSSMS*NCFIRA
Trigger: GGCTCGAATGAAGCAGTTCAAGGACATGCTGCTAGA...TGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp GCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTTCTAGCAGCATGTCCTaGAACTGCTTCATTCGAGCC +
Preference number: 5 (lower is better)
Translates to: ASGKFKPQMLLLLACINTSSSMS*NCFIRA
Trigger: GGCTCGAATGAAGCAGTTCAAGGACATGCTGCTAGA...AGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACTGCCTCAATGCGGGCTaGCCTTTCAAGCTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: FASGKFKPQMLLLLACINCLNAG*PFKLLF
Trigger: GAAAAGGAGCTTGAAAGGCAAGCCCGCATTGAGGCA...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp CTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGCCAACTCGGGTTTTCTaGGAGTCTGTGGTATTTGCA +
Preference number: 5 (lower is better)
Translates to: LLLLACINTARKNVTKSLPTRVF*ESVVFA
Trigger: TGCAAATACCACAGACTCCAAGAAAACCCGAGTTGG...CAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS GCA 90 bp GACAGAAGAGCTTTGAAATTCTGGATAGCTTCTTCTCGTTTGTGCTaGTCTCTCTCTCGATCTATTTCTTTTGTTTGTTCTGAACGGGCC +
Preference number: 5 (lower is better)
Translates to: DRRALKFWIASSRLC*SLSRSISFVCSERA
Trigger: GGCCCGTTCAGAACAAACAAAAGAAATAGATCGAGAGAGAGAGCAGCACAAACGAGAAGAAGCTATCCAGAATTTCAAAGCTCTTCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000503741.5
ENST00000506524.5
ENST00000509787.1
ENST00000514567.5
ENST00000514719.1
ENST00000549332.1
ENST00000679501.2
CDS-3UTR CAA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGTCCAACTGCTTGTGCTaGCACTTGTGCCTGGACCTG +
Preference number: 5 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLSNCLC*HLCLDL
Trigger: CAGGTCCAGGCACAAGTGCAAGCACAAGCAGTTGGA...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CAA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGGGAAGCTCCAACTGCTaGTGCTTGCACTTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLGSSNC*CLHLCL
Trigger: CAGGCACAAGTGCAAGCACAAGCAGTTGGAGCTTCC...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CAA 90 bp TTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGACTCAGGTATTGCTGTTGTaGGCTGAGGTACTGAATGAG +
Preference number: 5 (lower is better)
Translates to: LLLACINTARKNVTKSLTQVLLL*AEVLNE
Trigger: CTCATTCAGTACCTCAGCCAACAACAGCAATACCTG...AGTCAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACGTCATCTCCTCTTCTTaGGGCTCCTCCTTTATCTCC +
Preference number: 5 (lower is better)
Translates to: FASGKFKPQMLLLLACINVISSS*GSSFIS
Trigger: GGAGATAAAGGAGGAGCCCAAAGAAGAGGAGATGAC...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp CAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGAGAGAATTGCCACTTTaGGATCGACAGCATTGTCGG +
Preference number: 5 (lower is better)
Translates to: QMLLLLACINTARKNVTKRELPL*DRQHCR
Trigger: CCGACAATGCTGTCGATCCAAAAGTGGCAATTCTCT...CTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp CGACATGTTGAAAGAATGCCAAAAAGGCGCAAACCATCATACATTAATACAAAGACTCCTTCTCCCACGTaGAAAAAGCAGACACCCCTC +
Preference number: 5 (lower is better)
Translates to: RHVERMPKRRKPSYINTKTPSPT*KKQTPL
Trigger: GAGGGGTGTCTGCTTTTTCAACGTGGGAGAAGGAGT...CTTTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACATGTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CAA 90 bp TTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGACTATAGCTTCTTCTCGTTaGTGCTGCTCTCTCTCTCGA +
Preference number: 5 (lower is better)
Translates to: LLLACINTARKNVTKSLTIASSR*CCSLSR
Trigger: TCGAGAGAGAGAGCAGCACAAACGAGAAGAAGCTAT...AGTCAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp ATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCAATAGCTTCTTCTCGTTaGTGCTGCTCTCTCTCTCGA +
Preference number: 5 (lower is better)
Translates to: MLLLLACINTARKNVTKSIASSR*CCSLSR
Trigger: TCGAGAGAGAGAGCAGCACAAACGAGAAGAAGCTAT...TGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp ATCAACATATGCCACAATCAGTTTACGCCTCTCCTCTGGCACACAGTCCAGTACGTATTTAGAATTATTTaGTTGATCGTCTCGTGGGCT +
Preference number: 5 (lower is better)
Translates to: INICHNQFTPLLWHTVQYVFRII*LIVSWA
Trigger: AGCCCACGAGACGATCAACAAAATAATTCTAAATAC...GTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549332.1
CDS TCA 90 bp GGATGGTATGGTTCATTAAGCATGTTCAGCAAGGCTCAACAACTCTaGGGGGTAAGGGAGAAAGATTTTCAACAAAGTTTCAGGGTATCT +
Preference number: 5 (lower is better)
Translates to: GWYGSLSMFSKAQQL*GVREKDFQQSFRVS
Trigger: AGATACCCTGAAACTTTGTTGAAAATCTTTCTCCCTTACCCCTCAGAGTTGTTGAGCCTTGCTGAACATGCTTAATGAACCATACCATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514567.5
CDS-3UTR CAA 90 bp TTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACTTAACTCCATCTGGCTaGGTCCATGCAGATTCACGT +
Preference number: 5 (lower is better)
Translates to: FKPQMLLLLACINTARKNLTPSG*VHADSR
Trigger: ACGTGAATCTGCATGGACCAAGCCAGATGGAGTTAA...GTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp CAATTAGGAACTGATTCATGGTGTGATGTACACGACATGTTGAAAGAATGCCAACAGGTATTGCTGTTGTaGGCTGAGGTACTGAATGAG +
Preference number: 5 (lower is better)
Translates to: QLGTDSWCDVHDMLKECQQVLLL*AEVLNE
Trigger: CTCATTCAGTACCTCAGCCAACAACAGCAATACCTG...TTGGCATTCTTTCAACATGTCGTGTACATCACACCATGAATCAGTTCCTAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CAA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGCGGGCAGCTGACTATTaGCATCATTGCTACACCTGG +
Preference number: 5 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLRAADY*HHCYTW
Trigger: CCAGGTGTAGCAATGATGCAAATAGTCAGCTGCCCG...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000549332.1
CDS-3UTR CAA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACAGCATTGTCGGAGTaGGGTGCCTTAGTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: FASGKFKPQMLLLLACINTALSE*GALVSS
Trigger: TGAAGAAACTAAGGCACCCAACTCCGACAATGCTGT...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp CAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTGCACTCATAGAGAATaGCCACTTTTGGATCGACAG +
Preference number: 5 (lower is better)
Translates to: QMLLLLACINTARKNVTKCTHRE*PLLDRQ
Trigger: CTGTCGATCCAAAAGTGGCAATTCTCTATGAGTGCA...CTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGACTCCTTCTCCCACGTaGAAAAAGCAGACACCCCTC +
Preference number: 5 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLTPSPT*KKQTPL
Trigger: GAGGGGTGTCTGCTTTTTCAACGTGGGAGAAGGAGT...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CAA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAGGATCAAAAACTATCTaGTGCAACTCCTTCTCCCAC +
Preference number: 5 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGGSKTI*CNSFSH
Trigger: GTGGGAGAAGGAGTTGCACAAGATAGTTTTTGATCC...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp TTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGACTGGATCAAAAACTATCTaGTGCAACTCCTTCTCCCAC +
Preference number: 5 (lower is better)
Translates to: LLLACINTARKNVTKSLTGSKTI*CNSFSH
Trigger: GTGGGAGAAGGAGTTGCACAAGATAGTTTTTGATCC...AGTCAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp CTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGTTTCTCTCTTTAGGATaGAGAAGTAAGTACCGGGGA +
Preference number: 5 (lower is better)
Translates to: LLLLACINTARKNVTKSLFLSLG*RSKYRG
Trigger: TCCCCGGTACTTACTTCTCAATCCTAAAGAGAGAAA...CAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp CAGCCTATATTTGAGTATGTATGTCAGTCATGCCACACAAAGAAAAGCATAAATTGCCTCAATGCGGGCTaGCCTTTCAAGCTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: QPIFEYVCQSCHTKKSINCLNAG*PFKLLF
Trigger: GAAAAGGAGCTTGAAAGGCAAGCCCGCATTGAGGCA...ATTTATGCTTTTCTTTGTGTGGCATGACTGACATACATACTCAAATATAGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp CTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGTTTAGAATTATTTTGTaGATCGTCTCGTGGGCTCCG +
Preference number: 5 (lower is better)
Translates to: LLLLACINTARKNVTKSLFRIIL*IVSWAP
Trigger: CGGAGCCCACGAGACGATCAACAAAATAATTCTAAA...CAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGGGGTGGATGATGATGTaGAAGTGGATACTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLGWMMM*KWILQV
Trigger: CACCTGCAGTATCCACTTCAACATCATCATCCACCC...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CAA 90 bp CAGCCTATATTTGAGTATGTATGTCAGTCATGCCACACAAAGAAAAGCATAAATCTTGTGTTGTGGGTGTaGATACTGTCTGCGCAACTG +
Preference number: 5 (lower is better)
Translates to: QPIFEYVCQSCHTKKSINLVLWV*ILSAQL
Trigger: CAGTTGCGCAGACAGTATCAACACCCACAACACAAG...ATTTATGCTTTTCTTTGTGTGGCATGACTGACATACATACTCAAATATAGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACAAGCAGGTATTGCTGTaGTTGGCTGAGGTACTGAAT +
Preference number: 5 (lower is better)
Translates to: FASGKFKPQMLLLLACINKQVLL*LAEVLN
Trigger: ATTCAGTACCTCAGCCAACAACAGCAATACCTGCTT...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp CGACATGTTGAAAGAATGCCAAAAAGGCGCAAACCATCATACATTAATACAAAGGTGGAAAAGCAGGTATaGCTGTTGTTGGCTGAGGTA +
Preference number: 5 (lower is better)
Translates to: RHVERMPKRRKPSYINTKVEKQV*LLLAEV
Trigger: TACCTCAGCCAACAACAGCAATACCTGCTTTTCCAC...CTTTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACATGTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CAA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGGTCATCTCCTCTTCTTaGGGCTCCTCCTTTATCTCC +
Preference number: 5 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLVISSS*GSSFIS
Trigger: GGAGATAAAGGAGGAGCCCAAAGAAGAGGAGATGAC...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CAA 90 bp CAGCCTATATTTGAGTATGTATGTCAGTCATGCCACACAAAGAAAAGCATAAATTTTGGATCGACAGCATaGTCGGAGTTGGGTGCCTTA +
Preference number: 5 (lower is better)
Translates to: QPIFEYVCQSCHTKKSINFGSTA*SELGAL
Trigger: TAAGGCACCCAACTCCGACAATGCTGTCGATCCAAA...ATTTATGCTTTTCTTTGTGTGGCATGACTGACATACATACTCAAATATAGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGACTCGATCTATTTCTTTaGTTTGTTCTGAACGGGCCT +
Preference number: 5 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGLDLFL*FVLNGP
Trigger: AGGCCCGTTCAGAACAAACAAAAGAAATAGATCGAG...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp TTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGACTGATGTACACGACATGTaGAAAGAATGCCAAAAAGGC +
Preference number: 5 (lower is better)
Translates to: LLLACINTARKNVTKSLTDVHDM*KECQKG
Trigger: GCCTTTTTGGCATTCTTTCAACATGTCGTGTACATC...AGTCAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS CCA 90 bp AATTCTTGTTCCTCTTTAATTGCACTCATAGAGAATTGCCACTTTTaGATCGACAGCATTGTCGGAGTTGGGTGCCTTAGTTTCTTCAAT +
Preference number: 5 (lower is better)
Translates to: NSCSSLIALIENCHF*IDSIVGVGCLSFFN
Trigger: ATTGAAGAAACTAAGGCACCCAACTCCGACAATGCTGTCGATCCAAAAGTGGCAATTCTCTATGAGTGCAATTAAAGAGGAACAAGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000509810.5
ENST00000515203.5
ENST00000549332.1
ENST00000679501.2
CDS CCA 90 bp TTAATGCAATTTCTTTTTGTTGGCTTGCCACAAGAGTTATTTTCATaGCCATACTTTCAAGGTGGCCTAAGACAATCACCTGCAAACCCT +
Preference number: 5 (lower is better)
Translates to: LMQFLFVGLPQELFS*PYFQGGLRQSPANP
Trigger: AGGGTTTGCAGGTGATTGTCTTAGGCCACCTTGAAAGTATGGCCATGAAAATAACTCTTGTGGCAAGCCAACAAAAAGAAATTGCATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511077.1
CDS-3UTR CAA 90 bp ATGTTGAAAGAATGCCAAAAAGGCGCAAACCATCATACATTAATACAAAGGACATTAACTCCATCTGGCTaGGTCCATGCAGATTCACGT +
Preference number: 5 (lower is better)
Translates to: MLKECQKGANHHTLIQRTLTPSG*VHADSR
Trigger: ACGTGAATCTGCATGGACCAAGCCAGATGGAGTTAA...TGTCCTTTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CAA 90 bp ATGTTGAAAGAATGCCAAAAAGGCGCAAACCATCATACATTAATACAAAGGACAGGGTCTGATCTTGTGTaGTGGGTGTTGATACTGTCT +
Preference number: 5 (lower is better)
Translates to: MLKECQKGANHHTLIQRTGSDLV*WVLILS
Trigger: AGACAGTATCAACACCCACAACACAAGATCAGACCC...TGTCCTTTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CAA 90 bp CAGCCTATATTTGAGTATGTATGTCAGTCATGCCACACAAAGAAAAGCATAAATGGGTCTGATCTTGTGTaGTGGGTGTTGATACTGTCT +
Preference number: 5 (lower is better)
Translates to: QPIFEYVCQSCHTKKSINGSDLV*WVLILS
Trigger: AGACAGTATCAACACCCACAACACAAGATCAGACCC...ATTTATGCTTTTCTTTGTGTGGCATGACTGACATACATACTCAAATATAGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGGTGGAAAAGCAGGTATaGCTGTTGTTGGCTGAGGTA +
Preference number: 5 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLVEKQV*LLLAEV
Trigger: TACCTCAGCCAACAACAGCAATACCTGCTTTTCCAC...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CAA 90 bp ATGTTGAAAGAATGCCAAAAAGGCGCAAACCATCATACATTAATACAAAGGACAACAGCATTGTCGGAGTaGGGTGCCTTAGTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: MLKECQKGANHHTLIQRTTALSE*GALVSS
Trigger: TGAAGAAACTAAGGCACCCAACTCCGACAATGCTGT...TGTCCTTTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CAA 90 bp TTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACTTTCTCTCTTTAGGATaGAGAAGTAAGTACCGGGGA +
Preference number: 5 (lower is better)
Translates to: FKPQMLLLLACINTARKNFLSLG*RSKYRG
Trigger: TCCCCGGTACTTACTTCTCAATCCTAAAGAGAGAAA...GTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp CTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGGTATTTAGAATTATTTaGTTGATCGTCTCGTGGGCT +
Preference number: 5 (lower is better)
Translates to: LLLLACINTARKNVTKSLVFRII*LIVSWA
Trigger: AGCCCACGAGACGATCAACAAAATAATTCTAAATAC...CAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp CTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGTGGTTTCGCAATAGGTaGACTAATGCACATATATGT +
Preference number: 5 (lower is better)
Translates to: LLLLACINTARKNVTKSLWFRNR*TNAHIC
Trigger: ACATATATGTGCATTAGTCAACCTATTGCGAAACCA...CAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp CTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGAGAGACAGCCTATATTaGAGTATGTATGTCAGTCAT +
Preference number: 5 (lower is better)
Translates to: LLLLACINTARKNVTKSLRDSLY*SMYVSH
Trigger: ATGACTGACATACATACTCAAATATAGGCTGTCTCT...CAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAGGGGTTTTTCCCAGGTaGATTCTAATGTTCTATTAT +
Preference number: 5 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGGVFPR*ILMFYY
Trigger: ATAATAGAACATTAGAATCAACCTGGGAAAAACCCC...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp CAACATGTTAGTTATGACCGTGGTTCCATACCTGAGAAGAAATTACTACATAAATGCACTCATAGAGAATaGCCACTTTTGGATCGACAG +
Preference number: 5 (lower is better)
Translates to: QHVSYDRGSIPEKKLLHKCTHRE*PLLDRQ
Trigger: CTGTCGATCCAAAAGTGGCAATTCTCTATGAGTGCA...TTTATGTAGTAATTTCTTCTCAGGTATGGAACCACGGTCATAACTAACATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CAA 90 bp TTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCACTGACTGGATCACTTTCTACTTaGTCTTTTACTTTGCTCCAT +
Preference number: 5 (lower is better)
Translates to: LLLACINTARKNVTKSLTGSLST*SFTLLH
Trigger: ATGGAGCAAAGTAAAAGACAAAGTAGAAAGTGATCC...AGTCAGTGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp GCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTAAAGGTCTTCTCTCATaGATGAACTATCTACTGCTT +
Preference number: 5 (lower is better)
Translates to: ASGKFKPQMLLLLACINTKGLLS*MNYLLL
Trigger: AAGCAGTAGATAGTTCATCAATGAGAGAAGACCTTT...AGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp TTTGCATCTGGCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACTCAGACAGAAGAGCTTaGAAATTCTGGATAGCTTCT +
Preference number: 5 (lower is better)
Translates to: FASGKFKPQMLLLLACINSDRRA*KFWIAS
Trigger: AGAAGCTATCCAGAATTTCAAAGCTCTTCTGTCTGA...GTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGCCAGATGCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp GCAAGTTCAAGCCACAAATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAGTATTTAGAATTATTTaGTTGATCGTCTCGTGGGCT +
Preference number: 5 (lower is better)
Translates to: ASSSHKCSYFLHVLTLLGVFRII*LIVSWA
Trigger: AGCCCACGAGACGATCAACAAAATAATTCTAAATAC...TCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCATTTGTGGCTTGAACTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp ATGCTCTTACTTCTTGCATGTATTAACACTGCTAGGAAGAACGTCACCAAGTCATGGTTTCGCAATAGGTaGACTAATGCACATATATGT +
Preference number: 5 (lower is better)
Translates to: MLLLLACINTARKNVTKSWFRNR*TNAHIC
Trigger: ACATATATGTGCATTAGTCAACCTATTGCGAAACCA...TGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp CAACATGTTAGTTATGACCGTGGTTCCATACCTGAGAAGAAATTACTACATAAAGCACTGCTAAGAGACTaGAGCACCAAAATGATTCTC +
Preference number: 5 (lower is better)
Translates to: QHVSYDRGSIPEKKLLHKALLRD*STKMIL
Trigger: GAGAATCATTTTGGTGCTCAAGTCTCTTAGCAGTGC...TTTATGTAGTAATTTCTTCTCAGGTATGGAACCACGGTCATAACTAACATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CAA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGTTTCTCTCTTTAGGATaGAGAAGTAAGTACCGGGGA +
Preference number: 5 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLFLSLG*RSKYRG
Trigger: TCCCCGGTACTTACTTCTCAATCCTAAAGAGAGAAA...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CAA 90 bp CAACATGTTAGTTATGACCGTGGTTCCATACCTGAGAAGAAATTACTACATAAACTCGATCTATTTCTTTaGTTTGTTCTGAACGGGCCT +
Preference number: 5 (lower is better)
Translates to: QHVSYDRGSIPEKKLLHKLDLFL*FVLNGP
Trigger: AGGCCCGTTCAGAACAAACAAAAGAAATAGATCGAG...TTTATGTAGTAATTTCTTCTCAGGTATGGAACCACGGTCATAACTAACATGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CAA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGCTCGATCTATTTCTTTaGTTTGTTCTGAACGGGCCT +
Preference number: 5 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLLDLFL*FVLNGP
Trigger: AGGCCCGTTCAGAACAAACAAAAGAAATAGATCGAG...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CAA 90 bp GACATGTTGAAAGAATGCCAAAAAGGCGCAAACCATCATACATTAATACAAAGGTCAGACAGAAGAGCTTaGAAATTCTGGATAGCTTCT +
Preference number: 5 (lower is better)
Translates to: DMLKECQKGANHHTLIQRSDRRA*KFWIAS
Trigger: AGAAGCTATCCAGAATTTCAAAGCTCTTCTGTCTGA...CCTTTGTATTAATGTATGATGGTTTGCGCCTTTTTGGCATTCTTTCAACATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS-3UTR CAA 90 bp CAATTAGGAACTGATTCATGGTGTGATGTACACGACATGTTGAAAGAATGCCAAAGAGACAGCCTATATTaGAGTATGTATGTCAGTCAT +
Preference number: 5 (lower is better)
Translates to: QLGTDSWCDVHDMLKECQRDSLY*SMYVSH
Trigger: ATGACTGACATACATACTCAAATATAGGCTGTCTCT...TTGGCATTCTTTCAACATGTCGTGTACATCACACCATGAATCAGTTCCTAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296702.9
CDS GCA 90 bp AATGAAAAACAAAGCTATTTATTATCAGGCCTAAGAGAGCAATCATaGCTCCTAACAACATTCACATTACCTGTCCCTTCCAATCACAAA +
Preference number: 5 (lower is better)
Translates to: NEKQSYLLSGLREQS*LLTTFTLPVPSNHK
Trigger: TTTGTGATTGGAAGGGACAGGTAATGTGAATGTTGTTAGGAGGCATGATTGCTCTCTTAGGCCTGATAATAAATAGCTTTGTTTTTCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509810.5
CDS-3UTR CAA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGTCAGACAGAAGAGCTTaGAAATTCTGGATAGCTTCT +
Preference number: 5 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLSDRRA*KFWIAS
Trigger: AGAAGCTATCCAGAATTTCAAAGCTCTTCTGTCTGA...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CAA 90 bp CAGCCTATATTTGAGTATGTATGTCAGTCATGCCACACAAAGAAAAGCATAAATGGGGTTTTTCCCAGGTaGATTCTAATGTTCTATTAT +
Preference number: 5 (lower is better)
Translates to: QPIFEYVCQSCHTKKSINGVFPR*ILMFYY
Trigger: ATAATAGAACATTAGAATCAACCTGGGAAAAACCCC...ATTTATGCTTTTCTTTGTGTGGCATGACTGACATACATACTCAAATATAGGCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGGGGGTTTTTCCCAGGTaGATTCTAATGTTCTATTAT +
Preference number: 5 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLGVFPR*ILMFYY
Trigger: ATAATAGAACATTAGAATCAACCTGGGAAAAACCCC...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CAA 90 bp CAGCCTATATTTGAGTATGTATGTCAGTCATGCCACACAAAGAAAAGCATAAATGGATCACTTTCTACTTaGTCTTTTACTTTGCTCCAT +
Preference number: 5 (lower is better)
Translates to: QPIFEYVCQSCHTKKSINGSLST*SFTLLH
Trigger: ATGGAGCAAAGTAAAAGACAAAGTAGAAAGTGATCC...ATTTATGCTTTTCTTTGTGTGGCATGACTGACATACATACTCAAATATAGGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGGGATCACTTTCTACTTaGTCTTTTACTTTGCTCCAT +
Preference number: 5 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLGSLST*SFTLLH
Trigger: ATGGAGCAAAGTAAAAGACAAAGTAGAAAGTGATCC...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS-3UTR CAA 90 bp CAGCCTATATTTGAGTATGTATGTCAGTCATGCCACACAAAGAAAAGCATAAATAAAGGTCTTCTCTCATaGATGAACTATCTACTGCTT +
Preference number: 5 (lower is better)
Translates to: QPIFEYVCQSCHTKKSINKGLLS*MNYLLL
Trigger: AAGCAGTAGATAGTTCATCAATGAGAGAAGACCTTT...ATTTATGCTTTTCTTTGTGTGGCATGACTGACATACATACTCAAATATAGGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296702.9
ENST00000394421.7
CDS-3UTR CAA 90 bp TTTGTCAGATGGTTTCGCAATAGGTTGACTAATGCACATATATGTAAAAACCTGAAAGGTCTTCTCTCATaGATGAACTATCTACTGCTT +
Preference number: 5 (lower is better)
Translates to: FVRWFRNRLTNAHICKNLKGLLS*MNYLLL
Trigger: AAGCAGTAGATAGTTCATCAATGAGAGAAGACCTTT...CAGGTTTTTACATATATGTGCATTAGTCAACCTATTGCGAAACCATCTGACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS CAA 90 bp GTGGAGGAGGTCGCATCAGAGGTGGTGGGCCTCGCATCACTGCATTaGGTGGGGGAGCCGGACCTCGGAACCTCAAGGCCTGCTGTTGGG +
Preference number: 6 (lower is better)
Translates to: VEEVASEVVGLASLH*VGEPDLGTSRPAVG
Trigger: CCCAACAGCAGGCCTTGAGGTTCCGAGGTCCGGCTCCCCCACCAAATGCAGTGATGCGAGGCCCACCACCTCTGATGCGACCTCCTCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS GCA 72 bp TTTGGTGGGGGAGCCGGACCTCGGAACCTCAAGGCCTaGTGTTGGGCCATCCTGAGCTCCCCCGGGTTGAAT +
Preference number: 6 (lower is better)
Translates to: FGGGAGPRNLKA*CWAILSSPGLN
Trigger: ATTCAACCCGGGGGAGCTCAGGATGGCCCAACAGCAGGCCTTGAGGTTCCGAGGTCCGGCTCCCCCACCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS CCA 72 bp CATCAGAGGTGGTGGGCCTCGCATCACTGCATTTGGTaGGGGAGCCGGACCTCGGAACCTCAAGGCCTGCTG +
Preference number: 6 (lower is better)
Translates to: HQRWWASHHCIW*GSRTSEPQGLL
Trigger: CAGCAGGCCTTGAGGTTCCGAGGTCCGGCTCCCCCACCAAATGCAGTGATGCGAGGCCCACCACCTCTGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS CCA 72 bp TCGCATCAGAGGTGGTGGGCCTCGCATCACTGCATTTaGTGGGGGAGCCGGACCTCGGAACCTCAAGGCCTG +
Preference number: 6 (lower is better)
Translates to: SHQRWWASHHCI*WGSRTSEPQGL
Trigger: CAGGCCTTGAGGTTCCGAGGTCCGGCTCCCCCACCAAATGCAGTGATGCGAGGCCCACCACCTCTGATGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS CAA 72 bp GTCGCATCAGAGGTGGTGGGCCTCGCATCACTGCATTaGGTGGGGGAGCCGGACCTCGGAACCTCAAGGCCT +
Preference number: 6 (lower is better)
Translates to: VASEVVGLASLH*VGEPDLGTSRP
Trigger: AGGCCTTGAGGTTCCGAGGTCCGGCTCCCCCACCAAATGCAGTGATGCGAGGCCCACCACCTCTGATGCGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS GCA 72 bp AGGAGGTCGCATCAGAGGTGGTGGGCCTCGCATCACTaGATTTGGTGGGGGAGCCGGACCTCGGAACCTCAA +
Preference number: 6 (lower is better)
Translates to: RRSHQRWWASHH*IWWGSRTSEPQ
Trigger: TTGAGGTTCCGAGGTCCGGCTCCCCCACCAAATGCAGTGATGCGAGGCCCACCACCTCTGATGCGACCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS CCA 72 bp CATACCAAAAGGTGGAGGAGGTCGCATCAGAGGTGGTaGGCCTCGCATCACTGCATTTGGTGGGGGAGCCGG +
Preference number: 6 (lower is better)
Translates to: HTKRWRRSHQRW*ASHHCIWWGSR
Trigger: CCGGCTCCCCCACCAAATGCAGTGATGCGAGGCCCACCACCTCTGATGCGACCTCCTCCACCTTTTGGTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS CCA 72 bp TGGTGGTGGAGGAGGGCCTCGCATCATACCAAAAGGTaGAGGAGGTCGCATCAGAGGTGGTGGGCCTCGCAT +
Preference number: 6 (lower is better)
Translates to: WWWRRASHHTKR*RRSHQRWWASH
Trigger: ATGCGAGGCCCACCACCTCTGATGCGACCTCCTCCACCTTTTGGTATGATGCGAGGCCCTCCTCCACCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS CAA 72 bp TGGGCTACTGGTCGTAGGGGTGGAAGCTCCAACTGCTaGTGCTTGCACTTGTGCCTGGACCTGGGCCTGGAC +
Preference number: 6 (lower is better)
Translates to: WATGRRGGSSNC*CLHLCLDLGLD
Trigger: GTCCAGGCCCAGGTCCAGGCACAAGTGCAAGCACAAGCAGTTGGAGCTTCCACCCCTACGACCAGTAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS CCA 72 bp AGGATCAAAAGGAGGACGTCCAAAGGGCGGCCGTGGTaGTGGAGGAGGGCCTCGCATCATACCAAAAGGTGG +
Preference number: 6 (lower is better)
Translates to: RIKRRTSKGRPW*WRRASHHTKRW
Trigger: CCACCTTTTGGTATGATGCGAGGCCCTCCTCCACCACCACGGCCGCCCTTTGGACGTCCTCCTTTTGATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS CCA 72 bp CATCATACCAAAAGGTGGAGGAGGTCGCATCAGAGGTaGTGGGCCTCGCATCACTGCATTTGGTGGGGGAGC +
Preference number: 6 (lower is better)
Translates to: HHTKRWRRSHQR*WASHHCIWWGS
Trigger: GCTCCCCCACCAAATGCAGTGATGCGAGGCCCACCACCTCTGATGCGACCTCCTCCACCTTTTGGTATGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS CCA 72 bp ATTAGGATCAAAAGGAGGACGTCCAAAGGGCGGCCGTaGTGGTGGAGGAGGGCCTCGCATCATACCAAAAGG +
Preference number: 6 (lower is better)
Translates to: IRIKRRTSKGRP*WWRRASHHTKR
Trigger: CCTTTTGGTATGATGCGAGGCCCTCCTCCACCACCACGGCCGCCCTTTGGACGTCCTCCTTTTGATCCTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS CCA 72 bp GAGGTGTGGAGGGCCCATAGGTGGAGGTATCCCTCCTaGAGGAGGCATTGGCGGCATATTAGGATCAAAAGG +
Preference number: 6 (lower is better)
Translates to: EVWRAHRWRYPS*RRHWRHIRIKR
Trigger: CCTTTTGATCCTAATATGCCGCCAATGCCTCCTCCAGGAGGGATACCTCCACCTATGGGCCCTCCACACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS CCA 72 bp TGGAGTACCAGGAGCAGTCACAGGAGGCATTCCTGGTaGAAACATCATACCCGGAGGAGGAGGCATGGAACT +
Preference number: 6 (lower is better)
Translates to: WSTRSSHRRHSW*KHHTRRRRHGT
Trigger: AGTTCCATGCCTCCTCCTCCGGGTATGATGTTTCCACCAGGAATGCCTCCTGTGACTGCTCCTGGTACTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS CCA 72 bp GCCCATAGGTGGAGGTATCCCTCCTGGAGGAGGCATTaGCGGCATATTAGGATCAAAAGGAGGACGTCCAAA +
Preference number: 6 (lower is better)
Translates to: AHRWRYPSWRRH*RHIRIKRRTSK
Trigger: TTTGGACGTCCTCCTTTTGATCCTAATATGCCGCCAATGCCTCCTCCAGGAGGGATACCTCCACCTATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS GCA 72 bp GGCCTTTTGAACCTCCCTTTCTCGTTCTCGAAGGCTTaGCTCAATGCGGGCTTGCCTTTCAAGCTCCTTTTC +
Preference number: 6 (lower is better)
Translates to: GLLNLPFSFSKA*LNAGLPFKLLF
Trigger: GAAAAGGAGCTTGAAAGGCAAGCCCGCATTGAGGCAAGCCTTCGAGAACGAGAAAGGGAGGTTCAAAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000503741.5
ENST00000506524.5
ENST00000509787.1
ENST00000514567.5
ENST00000514719.1
ENST00000549332.1
ENST00000679501.2
CDS CCA 72 bp GCCAGGAAGGGGAACACGAAACGGAGGTACCATTACTaGTGGAAAAGCAGGTATTGCTGTTGTTGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: ARKGNTKRRYHY*WKSRYCCCWLR
Trigger: CCTCAGCCAACAACAGCAATACCTGCTTTTCCACCAGTAATGGTACCTCCGTTTCGTGTTCCCCTTCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000510724.1
ENST00000513298.5
ENST00000549332.1
ENST00000679501.2
CDS TCA 72 bp GTAGGCGTGGCAACTGAAACAGCAGAACTTGGGGTCTaGTCTTGTGTTGTGGGTGTTGATACTGTCTGCGCA +
Preference number: 6 (lower is better)
Translates to: VGVATETAELGV*SCVVGVDTVCA
Trigger: TGCGCAGACAGTATCAACACCCACAACACAAGATCAGACCCCAAGTTCTGCTGTTTCAGTTGCCACGCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS TCA 72 bp AAAAAGCAGACACCCCTCTCTCTAGCAGCATGTCCTTaGACTGCTTCATTCGAGCCTCCAGAGGGACAATGG +
Preference number: 6 (lower is better)
Translates to: KKQTPLSLAACP*TASFEPPEGQW
Trigger: CCATTGTCCCTCTGGAGGCTCGAATGAAGCAGTTCAAGGACATGCTGCTAGAGAGAGGGGTGTCTGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000506524.5
ENST00000515203.5
ENST00000549332.1
ENST00000679501.2
CDS CAA 90 bp GGGGAACACGAAACGGAGGTACCATTACTGGTGGAAAAGCAGGTATaGCTGTTGTTGGCTGAGGTACTGAATGAGGAACAGCAGGAGGTA +
Preference number: 6 (lower is better)
Translates to: GEHETEVPLLVEKQV*LLLAEVLNEEQQEV
Trigger: TACCTCCTGCTGTTCCTCATTCAGTACCTCAGCCAACAACAGCAATACCTGCTTTTCCACCAGTAATGGTACCTCCGTTTCGTGTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000510724.1
ENST00000513298.5
ENST00000549332.1
ENST00000679501.2
CDS TCA 72 bp GCCTGGGCTGCAAGCATAGGTGTCAGTTCTGATTGCTaGATAACCTTAACTCCATCTGGCTTGGTCCATGCA +
Preference number: 6 (lower is better)
Translates to: AWAASIGVSSDC*ITLTPSGLVHA
Trigger: TGCATGGACCAAGCCAGATGGAGTTAAGGTTATTCAGCAATCAGAACTGACACCTATGCTTGCAGCCCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS TCA 72 bp GTAGGCGTGGCAACTGAAACAGCAGAACTTGGGGTCTaGTCTTGTGTTGTGGGTGCTTGGCTAAATAGACAG +
Preference number: 6 (lower is better)
Translates to: VGVATETAELGV*SCVVGAWLNRQ
Trigger: CTGTCTATTTAGCCAAGCACCCACAACACAAGATCAGACCCCAAGTTCTGCTGTTTCAGTTGCCACGCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510724.1
ENST00000513298.5
CDS CAA 90 bp GAAACGGAGGTACCATTACTGGTGGAAAAGCAGGTATTGCTGTTGTaGGCTGAGGTACTGAATGAGGAACAGCAGGAGGTAACGTCTGAG +
Preference number: 6 (lower is better)
Translates to: ETEVPLLVEKQVLLL*AEVLNEEQQEVTSE
Trigger: CTCAGACGTTACCTCCTGCTGTTCCTCATTCAGTACCTCAGCCAACAACAGCAATACCTGCTTTTCCACCAGTAATGGTACCTCCGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000510724.1
ENST00000513298.5
ENST00000549332.1
ENST00000679501.2
CDS CAA 90 bp CACGAAACGGAGGTACCATTACTGGTGGAAAAGCAGGTATTGCTGTaGTTGGCTGAGGTACTGAATGAGGAACAGCAGGAGGTAACGTCT +
Preference number: 6 (lower is better)
Translates to: HETEVPLLVEKQVLL*LAEVLNEEQQEVTS
Trigger: AGACGTTACCTCCTGCTGTTCCTCATTCAGTACCTCAGCCAACAACAGCAATACCTGCTTTTCCACCAGTAATGGTACCTCCGTTTCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000510724.1
ENST00000513298.5
ENST00000549332.1
ENST00000679501.2
CDS TCA 72 bp AACCTGTGCCTGGGCTGCAAGCATAGGTGTCAGTTCTaGTTGCTGAATAACCTTAACTCCATCTGGCTTGGT +
Preference number: 6 (lower is better)
Translates to: NLCLGCKHRCQF*LLNNLNSIWLG
Trigger: ACCAAGCCAGATGGAGTTAAGGTTATTCAGCAATCAGAACTGACACCTATGCTTGCAGCCCAGGCACAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS TCA 72 bp TCCTCTCTTTCCAATAAGGATCCAGATTCCCAGCGGTaGTCTTTTCGGAGGGTCCTACGAGTATCAGACCAT +
Preference number: 6 (lower is better)
Translates to: SSLSNKDPDSQR*SFRRVLRVSDH
Trigger: ATGGTCTGATACTCGTAGGACCCTCCGAAAAGATCACCGCTGGGAATCTGGATCCTTATTGGAAAGAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000503741.5
ENST00000506524.5
ENST00000514567.5
ENST00000514719.1
ENST00000549332.1
ENST00000679501.2
CDS CCA 72 bp GGTAGAGGGACTGCCGTGAGCAATGGAAGGATGGTATaGTTCATTAAGCATGTTCAGCAAGGCTCAACAACT +
Preference number: 6 (lower is better)
Translates to: GRGTAVSNGRMV*FIKHVQQGSTT
Trigger: AGTTGTTGAGCCTTGCTGAACATGCTTAATGAACCATACCATCCTTCCATTGCTCACGGCAGTCCCTCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514567.5
CDS GCA 72 bp GTAGCGACTGTCTTTACATACGGGCAGCTGACTATTTaGATCATTGCTACACCTGGAAGTGGAATTGGCATG +
Preference number: 6 (lower is better)
Translates to: VATVFTYGQLTI*IIATPGSGIGM
Trigger: CATGCCAATTCCACTTCCAGGTGTAGCAATGATGCAAATAGTCAGCTGCCCGTATGTAAAGACAGTCGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000549332.1
ENST00000679501.2
CDS CAA 72 bp GAAACGGAGGTACCATTACTGGTGGAAAAGCAGGTATaGCTGTTGTTGGCTGAGGTACTGAATGAGGAACAG +
Preference number: 6 (lower is better)
Translates to: ETEVPLLVEKQV*LLLAEVLNEEQ
Trigger: CTGTTCCTCATTCAGTACCTCAGCCAACAACAGCAATACCTGCTTTTCCACCAGTAATGGTACCTCCGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000510724.1
ENST00000513298.5
ENST00000549332.1
ENST00000679501.2
CDS CAA 72 bp GGTAGCGACTGTCTTTACATACGGGCAGCTGACTATTaGCATCATTGCTACACCTGGAAGTGGAATTGGCAT +
Preference number: 6 (lower is better)
Translates to: GSDCLYIRAADY*HHCYTWKWNWH
Trigger: ATGCCAATTCCACTTCCAGGTGTAGCAATGATGCAAATAGTCAGCTGCCCGTATGTAAAGACAGTCGCTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000549332.1
ENST00000679501.2
CDS TCA 72 bp CGATCTATTTCTTTTGTTTGTTCTGAACGGGCCTTTTaGACCTCCCTTTCTCGTTCTCGAAGGCTTGCCTCA +
Preference number: 6 (lower is better)
Translates to: RSISFVCSERAF*TSLSRSRRLAS
Trigger: TGAGGCAAGCCTTCGAGAACGAGAAAGGGAGGTTCAAAAGGCCCGTTCAGAACAAACAAAAGAAATAGATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000503741.5
ENST00000506524.5
ENST00000509787.1
ENST00000514567.5
ENST00000514719.1
ENST00000549332.1
ENST00000679501.2
CDS GCA 72 bp AAGAACGTACCCCTGAAGAACGAGAAAGTCTGTCACTaGAACAGGAACACTTCCAAATCATATCAGGTAGAG +
Preference number: 6 (lower is better)
Translates to: KNVPLKNEKVCH*NRNTSKSYQVE
Trigger: CTCTACCTGATATGATTTGGAAGTGTTCCTGTTGCAGTGACAGACTTTCTCGTTCTTCAGGGGTACGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514567.5
CDS CCA 72 bp TCCTCTTTAATTGCACTCATAGAGAATTGCCACTTTTaGATCGACAGCATTGTCGGAGTTGGGTGCCTTAGT +
Preference number: 6 (lower is better)
Translates to: SSLIALIENCHF*IDSIVGVGCLS
Trigger: ACTAAGGCACCCAACTCCGACAATGCTGTCGATCCAAAAGTGGCAATTCTCTATGAGTGCAATTAAAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000509810.5
ENST00000515203.5
ENST00000549332.1
ENST00000679501.2
CDS CAA 72 bp CTCGTTTGTGCTGCTCTCTCTCTCGATCTATTTCTTTaGTTTGTTCTGAACGGGCCTTTTGAACCTCCCTTT +
Preference number: 6 (lower is better)
Translates to: LVCAALSLDLFL*FVLNGPFEPPF
Trigger: AAAGGGAGGTTCAAAAGGCCCGTTCAGAACAAACAAAAGAAATAGATCGAGAGAGAGAGCAGCACAAACGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000503741.5
ENST00000506524.5
ENST00000509787.1
ENST00000514567.5
ENST00000514719.1
ENST00000549332.1
ENST00000679501.2
CDS GCA 72 bp ATGGCCATACTTTCAAGGTGGCCTAAGACAATCACCTaGAAACCCTGTATTTACATGGGCAAACATCATAAC +
Preference number: 6 (lower is better)
Translates to: MAILSRWPKTIT*KPCIYMGKHHN
Trigger: GTTATGATGTTTGCCCATGTAAATACAGGGTTTGCAGGTGATTGTCTTAGGCCACCTTGAAAGTATGGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511077.1
CDS TCA 72 bp GGTTCATTAAGCATGTTCAGCAAGGCTCAACAACTCTaGGGGGTAAGGGAGAAAGATTTTCAACAAAGTTTC +
Preference number: 6 (lower is better)
Translates to: GSLSMFSKAQQL*GVREKDFQQSF
Trigger: GAAACTTTGTTGAAAATCTTTCTCCCTTACCCCTCAGAGTTGTTGAGCCTTGCTGAACATGCTTAATGAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514567.5
CDS GCA 72 bp AATTCTTGTTCCTCTTTAATTGCACTCATAGAGAATTaGCACTTTTGGATCGACAGCATTGTCGGAGTTGGG +
Preference number: 6 (lower is better)
Translates to: NSCSSLIALIEN*HFWIDSIVGVG
Trigger: CCCAACTCCGACAATGCTGTCGATCCAAAAGTGGCAATTCTCTATGAGTGCAATTAAAGAGGAACAAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000509810.5
ENST00000515203.5
ENST00000549332.1
ENST00000679501.2
CDS GCA 72 bp CAAAGCTATTTATTATCAGGCCTAAGAGAGCAATCATaGCTCCTAACAACATTCACATTACCTGTCCCTTCC +
Preference number: 6 (lower is better)
Translates to: QSYLLSGLREQS*LLTTFTLPVPS
Trigger: GGAAGGGACAGGTAATGTGAATGTTGTTAGGAGGCATGATTGCTCTCTTAGGCCTGATAATAAATAGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509810.5
CDS GCA 72 bp GGAGAAAGATTTTCAACAAAGTTTCAGGGTATCTCCTaGAGTCAGTTACACCTCCAGTCCTACAATCTCATA +
Preference number: 6 (lower is better)
Translates to: GERFSTKFQGIS*SQLHLQSYNLI
Trigger: TATGAGATTGTAGGACTGGAGGTGTAACTGACTGCAGGAGATACCCTGAAACTTTGTTGAAAATCTTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514567.5
CDS CCA 72 bp GGACAGGGAAGCAGCGTTAATGCAATTTCTTTTTGTTaGCTTGCCACAAGAGTTATTTTCATGGCCATACTT +
Preference number: 6 (lower is better)
Translates to: GQGSSVNAISFC*LATRVIFMAIL
Trigger: AAGTATGGCCATGAAAATAACTCTTGTGGCAAGCCAACAAAAAGAAATTGCATTAACGCTGCTTCCCTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511077.1
CDS GCA 72 bp TTGCTGAATAACCTTAACTCCATCTGGCTTGGTCCATaGAGATTCACGTGTCCGAGCATTATAATAATAAAC +
Preference number: 6 (lower is better)
Translates to: LLNNLNSIWLGP*RFTCPSIIIIN
Trigger: GTTTATTATTATAATGCTCGGACACGTGAATCTGCATGGACCAAGCCAGATGGAGTTAAGGTTATTCAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000507175.5
ENST00000549332.1
ENST00000679501.2
CDS CCA 72 bp TTTCTTTTTGTTGGCTTGCCACAAGAGTTATTTTCATaGCCATACTTTCAAGGTGGCCTAAGACAATCACCT +
Preference number: 6 (lower is better)
Translates to: FLFVGLPQELFS*PYFQGGLRQSP
Trigger: AGGTGATTGTCTTAGGCCACCTTGAAAGTATGGCCATGAAAATAACTCTTGTGGCAAGCCAACAAAAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511077.1
CDS CAA 72 bp TTAGGAGGGATCACTGACCACATGGCTAAGGACATTTaGAATTACTATGGGAGCAGTTATGAATGTGAAAAC +
Preference number: 6 (lower is better)
Translates to: LGGITDHMAKDI*NYYGSSYECEN
Trigger: GTTTTCACATTCATAACTGCTCCCATAGTAATTCAAAATGTCCTTAGCCATGTGGTCAGTGATCCCTCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511077.1
CDS TCA 72 bp AGCTTTAATTTCAGCTTCCATGGCAGCTTCTTTCTCTaGGTCAATGTCTTTATTATCGTCTCTCTTCCGTTT +
Preference number: 6 (lower is better)
Translates to: SFNFSFHGSFFL*VNVFIIVSLPF
Trigger: AAACGGAAGAGAGACGATAATAAAGACATTGACTCAGAGAAAGAAGCTGCCATGGAAGCTGAAATTAAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000549332.1
CDS CAA 72 bp AGAAGAGCTTTGAAATTCTGGATAGCTTCTTCTCGTTaGTGCTGCTCTCTCTCTCGATCTATTTCTTTTGTT +
Preference number: 6 (lower is better)
Translates to: RRALKFWIASSR*CCSLSRSISFV
Trigger: AACAAAAGAAATAGATCGAGAGAGAGAGCAGCACAAACGAGAAGAAGCTATCCAGAATTTCAAAGCTCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296702.9
ENST00000394421.7
ENST00000503741.5
ENST00000506524.5
ENST00000509787.1
ENST00000514567.5
ENST00000514719.1
ENST00000549332.1
ENST00000679501.2
CDS CAA 90 bp AATCTATTATTAGGAGGGATCACTGACCACATGGCTAAGGACATTTaGAATTACTATGGGAGCAGTTATGAATGTGAAAACTGCAAAGAA +
Preference number: 6 (lower is better)
Translates to: NLLLGGITDHMAKDI*NYYGSSYECENCKE
Trigger: TTCTTTGCAGTTTTCACATTCATAACTGCTCCCATAGTAATTCAAAATGTCCTTAGCCATGTGGTCAGTGATCCCTCCTAATAATAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511077.1
CDS TCA 72 bp AGCTTTAATTTCAGCTTCCATGGCAGCTTCTTTCTCTaGGTCAATGTCTTTATTATCGTCTCTCCTATAAAA +
Preference number: 6 (lower is better)
Translates to: SFNFSFHGSFFL*VNVFIIVSPIK
Trigger: TTTTATAGGAGAGACGATAATAAAGACATTGACTCAGAGAAAGAAGCTGCCATGGAAGCTGAAATTAAAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506524.5