RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TCEANC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000116205

Ensembl transcript IDs: ENST00000234827.6, ENST00000371331.1, ENST00000391366.3, ENST00000498272.1, ENST00000648983.1

Found 604 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGCTGCGTGGACTATCAGAGGCCAGCCTGGAGGCACGGGGGCGGTaGCATCCATTCATGAGCACATATGCATGGAGCCCTGCATGGGGC +
Preference number: 1 (lower is better)
Translates to: RLRGLSEASLEARGR*HPFMSTYAWSPAWG
Trigger: GCCCCATGCAGGGCTCCATGCATATGTGCTCATGAATGGATGGCACCGCCCCCGTGCCTCCAGGCTGGCCTCTGATAGTCCACGCAGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR GCA 90 bp GTCCACACGCTTGGGATTAGCTCTTCCCATGGAGCCCAGACTGTCTaGTCGGCTGCGTGGACTATCAGAGGCCAGCCTGGAGGCACGGGG +
Preference number: 1 (lower is better)
Translates to: VHTLGISSSHGAQTV*SAAWTIRGQPGGTG
Trigger: CCCCGTGCCTCCAGGCTGGCCTCTGATAGTCCACGCAGCCGAGCAGACAGTCTGGGCTCCATGGGAAGAGCTAATCCCAAGCGTGTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR TCA 90 bp AGCCCTGCATGGGGCCAAGCCCTATGCCAAGGACTGGAGGTCCAGTaGAGGAGAGACGGACAAGGTCGCTGCTCCCAGGAAGAGCTCTGC +
Preference number: 1 (lower is better)
Translates to: SPAWGQALCQGLEVQ*RRDGQGRCSQEELC
Trigger: GCAGAGCTCTTCCTGGGAGCAGCGACCTTGTCCGTCTCTCCTTCACTGGACCTCCAGTCCTTGGCATAGGGCTTGGCCCCATGCAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR GCA 90 bp GAGCATGACAGCCTTGCCAGAGAGGGAGGCCGGCCCACCCAGGAATaGCCATCCAATCGGTCCAGACTGGGATTTGGAGCCTGTCTGTGG +
Preference number: 1 (lower is better)
Translates to: EHDSLAREGGRPTQE*PSNRSRLGFGACLW
Trigger: CCACAGACAGGCTCCAAATCCCAGTCTGGACCGATTGGATGGGCATTCCTGGGTGGGCCGGCCTCCCTCTCTGGCAAGGCTGTCATGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR CCA 90 bp CTGGAGGCACGGGGGCGGTGCCATCCATTCATGAGCACATATGCATaGAGCCCTGCATGGGGCCAAGCCCTATGCCAAGGACTGGAGGTC +
Preference number: 1 (lower is better)
Translates to: LEARGRCHPFMSTYA*SPAWGQALCQGLEV
Trigger: GACCTCCAGTCCTTGGCATAGGGCTTGGCCCCATGCAGGGCTCCATGCATATGTGCTCATGAATGGATGGCACCGCCCCCGTGCCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR CCA 90 bp AGGGAGGCCGGCCCACCCAGGAATGCCCATCCAATCGGTCCAGACTaGGATTTGGAGCCTGTCTGTGGCCTACTGGCTCAGTCACCTTGG +
Preference number: 1 (lower is better)
Translates to: REAGPPRNAHPIGPD*DLEPVCGLLAQSPW
Trigger: CCAAGGTGACTGAGCCAGTAGGCCACAGACAGGCTCCAAATCCCAGTCTGGACCGATTGGATGGGCATTCCTGGGTGGGCCGGCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR CCA 90 bp CCGGCCCACCCAGGAATGCCCATCCAATCGGTCCAGACTGGGATTTaGAGCCTGTCTGTGGCCTACTGGCTCAGTCACCTTGGGCAAGTC +
Preference number: 1 (lower is better)
Translates to: PAHPGMPIQSVQTGI*SLSVAYWLSHLGQV
Trigger: GACTTGCCCAAGGTGACTGAGCCAGTAGGCCACAGACAGGCTCCAAATCCCAGTCTGGACCGATTGGATGGGCATTCCTGGGTGGGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR GCA 90 bp GCACCCTGGAGGATGGCAGCTCTTCTCTCAGGGTTTCTGAGCTGGTaGCCCAGCTGTGCCTTCGACACAGTTGCAAGCTGGCAGCTTCAG +
Preference number: 1 (lower is better)
Translates to: APWRMAALLSGFLSW*PSCAFDTVASWQLQ
Trigger: CTGAAGCTGCCAGCTTGCAACTGTGTCGAAGGCACAGCTGGGGCACCAGCTCAGAAACCCTGAGAGAAGAGCTGCCATCCTCCAGGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 90 bp AGGTGTGGGAGGCTTCGGGCCAGTTCCTCATTAGTAGCCTCAGCATaGGGGCTCTGGAGACCAACGCAGAAGGTCTTCCAGGGAGAGCTG +
Preference number: 1 (lower is better)
Translates to: RCGRLRASSSLVASA*GLWRPTQKVFQGEL
Trigger: CAGCTCTCCCTGGAAGACCTTCTGCGTTGGTCTCCAGAGCCCCCATGCTGAGGCTACTAATGAGGAACTGGCCCGAAGCCTCCCACACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 90 bp GCTGCACCCTGGAGGATGGCAGCTCTTCTCTCAGGGTTTCTGAGCTaGTGCCCCAGCTGTGCCTTCGACACAGTTGCAAGCTGGCAGCTT +
Preference number: 1 (lower is better)
Translates to: AAPWRMAALLSGFLS*CPSCAFDTVASWQL
Trigger: AAGCTGCCAGCTTGCAACTGTGTCGAAGGCACAGCTGGGGCACCAGCTCAGAAACCCTGAGAGAAGAGCTGCCATCCTCCAGGGTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR GCA 90 bp ACTCTTCCATTGAGGAAAATTCCCAGGGGGCTGACAGCTGAAGGCTaGTGGCTGAGAGCACTCCCAGTAGCTGTGGGAAGAGGCCCAGGA +
Preference number: 1 (lower is better)
Translates to: TLPLRKIPRGLTAEG*WLRALPVAVGRGPG
Trigger: TCCTGGGCCTCTTCCCACAGCTACTGGGAGTGCTCTCAGCCAGCAGCCTTCAGCTGTCAGCCCCCTGGGAATTTTCCTCAATGGAAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
3UTR TCA 90 bp CTTGGTTGGCTGAGGGTGGGAGATGTGGGGTCTAGGCTGACTCCTTaGGTTCCTAGCTGGAGTGTCTGGCTTGCTGGTACTGCCAATGGA +
Preference number: 1 (lower is better)
Translates to: LGWLRVGDVGSRLTP*VPSWSVWLAGTANG
Trigger: TCCATTGGCAGTACCAGCAAGCCAGACACTCCAGCTAGGAACTCAAGGAGTCAGCCTAGACCCCACATCTCCCACCCTCAGCCAACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 90 bp AGGCTTCGGGCCAGTTCCTCATTAGTAGCCTCAGCATGGGGGCTCTaGAGACCAACGCAGAAGGTCTTCCAGGGAGAGCTGAAACGTTCA +
Preference number: 1 (lower is better)
Translates to: RLRASSSLVASAWGL*RPTQKVFQGELKRS
Trigger: TGAACGTTTCAGCTCTCCCTGGAAGACCTTCTGCGTTGGTCTCCAGAGCCCCCATGCTGAGGCTACTAATGAGGAACTGGCCCGAAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 90 bp CCAACGCAGAAGGTCTTCCAGGGAGAGCTGAAACGTTCAGATAAGTaGGCTCTGGGAAGAAGGGGTAGTTGGCTGGCTCTCGCAGGCTCA +
Preference number: 1 (lower is better)
Translates to: PTQKVFQGELKRSDK*ALGRRGSWLALAGS
Trigger: TGAGCCTGCGAGAGCCAGCCAACTACCCCTTCTTCCCAGAGCTCACTTATCTGAACGTTTCAGCTCTCCCTGGAAGACCTTCTGCGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 90 bp GTCCCACACCGCATGGCCACTTGTGTTGTAGCCTGGAGCTTCTGCTaGGCCCTTTCCTGCTCTGGGCCCCAATCAAAACACAACTTTCTG +
Preference number: 1 (lower is better)
Translates to: VPHRMATCVVAWSFC*ALSCSGPQSKHNFL
Trigger: CAGAAAGTTGTGTTTTGATTGGGGCCCAGAGCAGGAAAGGGCTCAGCAGAAGCTCCAGGCTACAACACAAGTGGCCATGCGGTGTGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 90 bp AAACTTCACAGGCATCTGTTCCCACCACAGATACCTCGGGTACTTTaGGCTCTGCCAGCTCATCTGTCCCACACCGCATGGCCACTTGTG +
Preference number: 1 (lower is better)
Translates to: KLHRHLFPPQIPRVL*ALPAHLSHTAWPLV
Trigger: CACAAGTGGCCATGCGGTGTGGGACAGATGAGCTGGCAGAGCCCAAAGTACCCGAGGTATCTGTGGTGGGAACAGATGCCTGTGAAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 90 bp TATGAAGACCTCAGCCAGTCTCATGGGAGGGTCTTGAAGCTGAGATaGCCCTTCCAAGTTGTCAAGTTGAGGCAGTGGGGCCAGGCCTTC +
Preference number: 1 (lower is better)
Translates to: YEDLSQSHGRVLKLR*PFQVVKLRQWGQAF
Trigger: GAAGGCCTGGCCCCACTGCCTCAACTTGACAACTTGGAAGGGCCATCTCAGCTTCAAGACCCTCCCATGAGACTGGCTGAGGTCTTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
3UTR GCA 90 bp ACATTCCTGCAGGCCTGTCTCCTAGGGCTCTCCGAATCCTCTGTCTaGAAAGGAACGGCACCATGGGAAAATCTAGCACAGCCAGCATCA +
Preference number: 1 (lower is better)
Translates to: TFLQACLLGLSESSV*KGTAPWENLAQPAS
Trigger: TGATGCTGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTTGCAGACAGAGGATTCGGAGAGCCCTAGGAGACAGGCCTGCAGGAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000648983.1
3UTR CCA 90 bp GAACAGGCAGGTACTGGTGCAAAGGTAGTGGATGACATAGATGTCTaGGCCACCTGCTCACGTAACTATCTTCTGCCCTCTGGCCCTGCT +
Preference number: 1 (lower is better)
Translates to: EQAGTGAKVVDDIDV*ATCSRNYLLPSGPA
Trigger: AGCAGGGCCAGAGGGCAGAAGATAGTTACGTGAGCAGGTGGCCCAGACATCTATGTCATCCACTACCTTTGCACCAGTACCTGCCTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 90 bp GGGAAGGGGGCAGGAAAGGAAGCAGGATTGCTCAGAGAGATAAATTaGGCTCCGATGCTGTATGAAGACCTCAGCCAGTCTCATGGGAGG +
Preference number: 1 (lower is better)
Translates to: GKGAGKEAGLLREIN*APMLYEDLSQSHGR
Trigger: CCTCCCATGAGACTGGCTGAGGTCTTCATACAGCATCGGAGCCCAATTTATCTCTCTGAGCAATCCTGCTTCCTTTCCTGCCCCCTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
3UTR CCA 90 bp AGTAAAAAGCTTTCTGCCCGGTGTGGGAAGGTTGGACTTAGGAGTTaGACAGGCCACTCTAGAGGTCAATGTGGAGAGGGGACTGGCCAC +
Preference number: 1 (lower is better)
Translates to: SKKLSARCGKVGLRS*TGHSRGQCGEGTGH
Trigger: GTGGCCAGTCCCCTCTCCACATTGACCTCTAGAGTGGCCTGTCCAACTCCTAAGTCCAACCTTCCCACACCGGGCAGAAAGCTTTTTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR GCA 90 bp GGGGTCTGGGCAGCACAGGATGGTGTCCACTACAGCCCACATTTGTaGTGCTCAGCTCTACTTTTTGGTTTAAGTTCTGGTGGACCTCCT +
Preference number: 1 (lower is better)
Translates to: GVWAAQDGVHYSPHL*CSALLFGLSSGGPP
Trigger: AGGAGGTCCACCAGAACTTAAACCAAAAAGTAGAGCTGAGCAGCACAAATGTGGGCTGTAGTGGACACCATCCTGTGCTGCCCAGACCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
3UTR GCA 90 bp CAAGTTGAGGCAGTGGGGCCAGGCCTTCATAACCTTGAACTGACCTaGCTGGGAAAGGGGTATGTCAGTGAGGTAACTCTTCCATTGAGG +
Preference number: 1 (lower is better)
Translates to: QVEAVGPGLHNLELT*LGKGYVSEVTLPLR
Trigger: CCTCAATGGAAGAGTTACCTCACTGACATACCCCTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGGCCCCACTGCCTCAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
3UTR CCA 90 bp CTCCTAGGGCTCTCCGAATCCTCTGTCTGCAAAGGAACGGCACCATaGGAAAATCTAGCACAGCCAGCATCAGCCATCACCCAAACTCAA +
Preference number: 1 (lower is better)
Translates to: LLGLSESSVCKGTAP*ENLAQPASAITQTQ
Trigger: TTGAGTTTGGGTGATGGCTGATGCTGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTTGCAGACAGAGGATTCGGAGAGCCCTAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000648983.1
3UTR GCA 90 bp CTAAGCTCAGGCTCCTTCTCTTTCCACATACAGTGGATGGCTAGGTaGATGATGCACAACCTATGCCCACTAGAAGGACTCCCCACTCTG +
Preference number: 1 (lower is better)
Translates to: LSSGSFSFHIQWMAR*MMHNLCPLEGLPTL
Trigger: CAGAGTGGGGAGTCCTTCTAGTGGGCATAGGTTGTGCATCATGCACCTAGCCATCCACTGTATGTGGAAAGAGAAGGAGCCTGAGCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR GCA 90 bp CCTTTGCACTCTCTCTCTCCCCTGCTGTCTTGTGAAGAAGATGCCTaGTTCCCCTTGCCTTCTGCCATGATTGTAAGTTTCCTGAGGCCT +
Preference number: 1 (lower is better)
Translates to: PLHSLSPLLSCEEDA*FPLPSAMIVSFLRP
Trigger: AGGCCTCAGGAAACTTACAATCATGGCAGAAGGCAAGGGGAAGCAGGCATCTTCTTCACAAGACAGCAGGGGAGAGAGAGAGTGCAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 90 bp GTGAAATCCATCACCCTTTCACCATGTTGGGTGATAGCAACCGTATaGCGCTTCCTAGTGACAGCCAGTGTGCGTTCTGTTAGGCAGCAC +
Preference number: 1 (lower is better)
Translates to: VKSITLSPCWVIATV*RFLVTASVRSVRQH
Trigger: GTGCTGCCTAACAGAACGCACACTGGCTGTCACTAGGAAGCGCCATACGGTTGCTATCACCCAACATGGTGAAAGGGTGATGGATTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000648983.1
3UTR CCA 90 bp CACTTGTGTTGTAGCCTGGAGCTTCTGCTGAGCCCTTTCCTGCTCTaGGCCCCAATCAAAACACAACTTTCTGTGTCATCCGGTACATGG +
Preference number: 1 (lower is better)
Translates to: HLCCSLELLLSPFLL*APIKTQLSVSSGTW
Trigger: CCATGTACCGGATGACACAGAAAGTTGTGTTTTGATTGGGGCCCAGAGCAGGAAAGGGCTCAGCAGAAGCTCCAGGCTACAACACAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 90 bp GAATGCCCATCCAATCGGTCCAGACTGGGATTTGGAGCCTGTCTGTaGCCTACTGGCTCAGTCACCTTGGGCAAGTCATTTAACTTCTCT +
Preference number: 1 (lower is better)
Translates to: ECPSNRSRLGFGACL*PTGSVTLGKSFNFS
Trigger: AGAGAAGTTAAATGACTTGCCCAAGGTGACTGAGCCAGTAGGCCACAGACAGGCTCCAAATCCCAGTCTGGACCGATTGGATGGGCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR GCA 90 bp TCTTTCCACATACAGTGGATGGCTAGGTGCATGATGCACAACCTATaGCCACTAGAAGGACTCCCCACTCTGCTGTCTTTCAAGGATGCC +
Preference number: 1 (lower is better)
Translates to: SFHIQWMARCMMHNL*PLEGLPTLLSFKDA
Trigger: GGCATCCTTGAAAGACAGCAGAGTGGGGAGTCCTTCTAGTGGGCATAGGTTGTGCATCATGCACCTAGCCATCCACTGTATGTGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR GCA 90 bp GTCTGGGCAGCACAGGATGGTGTCCACTACAGCCCACATTTGTGCTaGTCAGCTCTACTTTTTGGTTTAAGTTCTGGTGGACCTCCTTTC +
Preference number: 1 (lower is better)
Translates to: VWAAQDGVHYSPHLC*SALLFGLSSGGPPF
Trigger: GAAAGGAGGTCCACCAGAACTTAAACCAAAAAGTAGAGCTGAGCAGCACAAATGTGGGCTGTAGTGGACACCATCCTGTGCTGCCCAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
3UTR CCA 90 bp TCCAAGCAAAAGCAACTCAAACTAATAAAAGCTGCGCCTCCGCTCTaGGTTCCACACCATCTGTCGGTCCACACGCTTGGGATTAGCTCT +
Preference number: 1 (lower is better)
Translates to: SKQKQLKLIKAAPPL*VPHHLSVHTLGISS
Trigger: AGAGCTAATCCCAAGCGTGTGGACCGACAGATGGTGTGGAACCCAGAGCGGAGGCGCAGCTTTTATTAGTTTGAGTTGCTTTTGCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR TCA 90 bp GGATCACGGAGCCGGTTTCCCCCATGCTGTTGTCATGATAGTGAGTaGCTTCTCAAGAGATCCGATGGTTTCAAAGTGTTTGGCAGTTCC +
Preference number: 1 (lower is better)
Translates to: GSRSRFPPCCCHDSE*LLKRSDGFKVFGSS
Trigger: GGAACTGCCAAACACTTTGAAACCATCGGATCTCTTGAGAAGTCACTCACTATCATGACAACAGCATGGGGGAAACCGGCTCCGTGATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 90 bp CTCCAGTTGACCTTCCTGAGTAGTACCCTTAGGCATGAATTGGACTaGCCCAGCAGAAGTTTGGCCCAGGATTGTGGCCGAGAAACAAAA +
Preference number: 1 (lower is better)
Translates to: LQLTFLSSTLRHELD*PSRSLAQDCGRETK
Trigger: TTTTGTTTCTCGGCCACAATCCTGGGCCAAACTTCTGCTGGGTCAGTCCAATTCATGCCTAAGGGTACTACTCAGGAAGGTCAACTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR GCA 90 bp TCTCAAGAGATCCGATGGTTTCAAAGTGTTTGGCAGTTCCCCCTTTaGACTCTCTCTCTCCCCTGCTGTCTTGTGAAGAAGATGCCTGCT +
Preference number: 1 (lower is better)
Translates to: SQEIRWFQSVWQFPL*TLSLPCCLVKKMPA
Trigger: AGCAGGCATCTTCTTCACAAGACAGCAGGGGAGAGAGAGAGTGCAAAGGGGGAACTGCCAAACACTTTGAAACCATCGGATCTCTTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 90 bp GTCCTTGGCATATTCACAGTGAAATCCATCACCCTTTCACCATGTTaGGTGATAGCAACCGTATGGCGCTTCCTAGTGACAGCCAGTGTG +
Preference number: 1 (lower is better)
Translates to: VLGIFTVKSITLSPC*VIATVWRFLVTASV
Trigger: CACACTGGCTGTCACTAGGAAGCGCCATACGGTTGCTATCACCCAACATGGTGAAAGGGTGATGGATTTCACTGTGAATATGCCAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000648983.1
3UTR TCA 90 bp CTATCAGCTGGATATTATAAAGAGCTCCCCAGGCAGCCAAAGGTGTaGAATGAGGAACAGGCAGGTACTGGTGCAAAGGTAGTGGATGAC +
Preference number: 1 (lower is better)
Translates to: LSAGYYKELPRQPKV*NEEQAGTGAKVVDD
Trigger: GTCATCCACTACCTTTGCACCAGTACCTGCCTGTTCCTCATTTCACACCTTTGGCTGCCTGGGGAGCTCTTTATAATATCCAGCTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR GCA 90 bp CTCCGAGTTACTTCTCAGTGTGTGGGCAAGATTGGGAGGGATGTCTaGAAGCTTCCTTCCCTTCAGCAAATGCTCAGAATAGCTCCATTA +
Preference number: 1 (lower is better)
Translates to: LRVTSQCVGKIGRDV*KLPSLQQMLRIAPL
Trigger: TAATGGAGCTATTCTGAGCATTTGCTGAAGGGAAGGAAGCTTGCAGACATCCCTCCCAATCTTGCCCACACACTGAGAAGTAACTCGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR GCA 90 bp ATGCTAATCCTATTCCAAGCAAAAGCAACTCAAACTAATAAAAGCTaGGCCTCCGCTCTGGGTTCCACACCATCTGTCGGTCCACACGCT +
Preference number: 1 (lower is better)
Translates to: MLILFQAKATQTNKS*ASALGSTPSVGPHA
Trigger: AGCGTGTGGACCGACAGATGGTGTGGAACCCAGAGCGGAGGCGCAGCTTTTATTAGTTTGAGTTGCTTTTGCTTGGAATAGGATTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR CCA 90 bp ACTACACCACCATGGTTGCTGTTTATACACCCATTGTGTCAGCTCTaGGGTGGCCTCAGAGACTGGTTGATGTCAACTGTGTGTACATTG +
Preference number: 1 (lower is better)
Translates to: TTPPWLLFIHPLCQL*GGLRDWLMSTVCTL
Trigger: CAATGTACACACAGTTGACATCAACCAGTCTCTGAGGCCACCCCAGAGCTGACACAATGGGTGTATAAACAGCAACCATGGTGGTGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 90 bp TCAAGGGATGGAGCTATATCTAGGTTCAGAGTTGGTCTCTGTTACTaGCAGGCCGAACACTCAGCAGCAGCAATAGCTAGATCAGTCTTG +
Preference number: 1 (lower is better)
Translates to: SRDGAISRFRVGLCY*QAEHSAAAIARSVL
Trigger: CAAGACTGATCTAGCTATTGCTGCTGCTGAGTGTTCGGCCTGCCAGTAACAGAGACCAACTCTGAACCTAGATATAGCTCCATCCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 90 bp CTGAGATGGAGATTAGCATGCGGGAAGTTTATCAGGGATTGCTCTTaGGAAGGGGGCAGGAAAGGAAGCAGGATTGCTCAGAGAGATAAA +
Preference number: 1 (lower is better)
Translates to: LRWRLACGKFIRDCS*EGGRKGSRIAQRDK
Trigger: TTTATCTCTCTGAGCAATCCTGCTTCCTTTCCTGCCCCCTTCCCAAGAGCAATCCCTGATAAACTTCCCGCATGCTAATCTCCATCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
3UTR GCA 90 bp GTGATGTTTCTGTTCAGTGAGCCTCAGGCTCCCATTTGTAACTACTaGTCAGTATACACCTACCCCACAGAATGGATGCTCAGGAAATGG +
Preference number: 1 (lower is better)
Translates to: VMFLFSEPQAPICNY*SVYTYPTEWMLRKW
Trigger: CCATTTCCTGAGCATCCATTCTGTGGGGTAGGTGTATACTGAGCAGTAGTTACAAATGGGAGCCTGAGGCTCACTGAACAGAAACATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 90 bp TCCATGTATAGTCTAAGCTCAGGCTCCTTCTCTTTCCACATACAGTaGATGGCTAGGTGCATGATGCACAACCTATGCCCACTAGAAGGA +
Preference number: 1 (lower is better)
Translates to: SMYSLSSGSFSFHIQ*MARCMMHNLCPLEG
Trigger: TCCTTCTAGTGGGCATAGGTTGTGCATCATGCACCTAGCCATCCACTGTATGTGGAAAGAGAAGGAGCCTGAGCTTAGACTATACATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 90 bp TATCTAAACTCAGGGGGATGGAACCGAGTGAGCGGCAGCGGTAATTaGGTTTCAGTTACCTGCAGGGTGGTGAAATATAGTAGTAACTTC +
Preference number: 1 (lower is better)
Translates to: YLNSGGWNRVSGSGN*VSVTCRVVKYSSNF
Trigger: GAAGTTACTACTATATTTCACCACCCTGCAGGTAACTGAAACTCAATTACCGCTGCCGCTCACTCGGTTCCATCCCCCTGAGTTTAGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 90 bp TCTCCATGGTATGTGCTCTCTGGTGGGTGTTTACATGGAATACAATaGTCTTCACACTTGGTGCCCACTCCTATAGGTCCAACTACATGC +
Preference number: 1 (lower is better)
Translates to: SPWYVLSGGCLHGIQ*SSHLVPTPIGPTTC
Trigger: GCATGTAGTTGGACCTATAGGAGTGGGCACCAAGTGTGAAGATCATTGTATTCCATGTAAACACCCACCAGAGAGCACATACCATGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 90 bp TTATACACCCATTGTGTCAGCTCTGGGGTGGCCTCAGAGACTGGTTaGTGTCAACTGTGTGTACATTGTTGTTTAGTGCTTCTCCATGGT +
Preference number: 1 (lower is better)
Translates to: LYTHCVSSGVASETG*CQLCVHCCLVLLHG
Trigger: ACCATGGAGAAGCACTAAACAACAATGTACACACAGTTGACATCAACCAGTCTCTGAGGCCACCCCAGAGCTGACACAATGGGTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 90 bp TCATGTATTCTACCTATTGGAGACAAAGCATCACGTAACGGTCTTTaGTTTCGAACATGTGCTGCACCCTGGAGGATGGCAGCTCTTCTC +
Preference number: 1 (lower is better)
Translates to: SCILPIGDKASRNGL*FRTCAAPWRMAALL
Trigger: GAGAAGAGCTGCCATCCTCCAGGGTGCAGCACATGTTCGAAATCAAAGACCGTTACGTGATGCTTTGTCTCCAATAGGTAGAATACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 90 bp TTTTCATTTTTAACAGACTGTAGCTCCGAGTTACTTCTCAGTGTGTaGGCAAGATTGGGAGGGATGTCTGCAAGCTTCCTTCCCTTCAGC +
Preference number: 1 (lower is better)
Translates to: FSFLTDCSSELLLSV*ARLGGMSASFLPFS
Trigger: GCTGAAGGGAAGGAAGCTTGCAGACATCCCTCCCAATCTTGCCCACACACTGAGAAGTAACTCGGAGCTACAGTCTGTTAAAAATGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 90 bp CTGTTTATACACCCATTGTGTCAGCTCTGGGGTGGCCTCAGAGACTaGTTGATGTCAACTGTGTGTACATTGTTGTTTAGTGCTTCTCCA +
Preference number: 1 (lower is better)
Translates to: LFIHPLCQLWGGLRD*LMSTVCTLLFSASP
Trigger: TGGAGAAGCACTAAACAACAATGTACACACAGTTGACATCAACCAGTCTCTGAGGCCACCCCAGAGCTGACACAATGGGTGTATAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 90 bp CAGGAAGAGCTCTGCAGGGTGGTGAAATATAGTAGTAACTTCATCTaGCTGACATGGGGGAAGTTTAGAGGTGTCCTTGGCATATTCACA +
Preference number: 1 (lower is better)
Translates to: QEELCRVVKYSSNFI*LTWGKFRGVLGIFT
Trigger: TGTGAATATGCCAAGGACACCTCTAAACTTCCCCCATGTCAGTCAGATGAAGTTACTACTATATTTCACCACCCTGCAGAGCTCTTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR GCA 90 bp CCAATCACCTTCCAGATATCTCCACTTCTGGGTTTTTCCATACTCTaGTTGCTCTGCCAGGCATGCATCTCAACCACCCAATTAATTACT +
Preference number: 1 (lower is better)
Translates to: PITFQISPLLGFSIL*LLCQACISTTQLIT
Trigger: AGTAATTAATTGGGTGGTTGAGATGCATGCCTGGCAGAGCAAGCAGAGTATGGAAAAACCCAGAAGTGGAGATATCTGGAAGGTGATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR GCA 90 bp CCAGACTCAGAGGAAATTATCTCTCCTTTATTGCTGTGTCCCCAGTaGCAGTCTAGTCCTTGGCACACAGAAGATGGGCAATATTTGTTT +
Preference number: 1 (lower is better)
Translates to: PDSEEIISPLLLCPQ*QSSPWHTEDGQYLF
Trigger: AAACAAATATTGCCCATCTTCTGTGTGCCAAGGACTAGACTGGCACTGGGGACACAGCAATAAAGGAGAGATAATTTCCTCTGAGTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR GCA 90 bp CCTTGGGCAAGTCATTTAACTTCTCTGAGCCATCAGCTTTTCATTTaGCAAATGAGGATGGTGATACTATCTGCCTTGCAGGGTTGTCGT +
Preference number: 1 (lower is better)
Translates to: PWASHLTSLSHQLFI*QMRMVILSALQGCR
Trigger: ACGACAACCCTGCAAGGCAGATAGTATCACCATCCTCATTTGGCAAATGAAAAGCTGATGGCTCAGAGAAGTTAAATGACTTGCCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR CCA 90 bp GCTCATGATGAACAGCTTTGGTCACATGGTCAACTTGATGATCCATaGTCTGATGATCTGTCTCTACCAGAACCCTGTAGCATCAAGAGT +
Preference number: 1 (lower is better)
Translates to: AHDEQLWSHGQLDDP*SDDLSLPEPCSIKS
Trigger: ACTCTTGATGCTACAGGGTTCTGGTAGAGACAGATCATCAGACCATGGATCATCAAGTTGACCATGTGACCAAAGCTGTTCATCATGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 90 bp CATGTTATATCTGAGATGTCTATGGGGCATCTAGGAAATATCATCTaGAAGTCAGGGGACAGGTCTGGGCTGACGATACAAACTGGAATG +
Preference number: 1 (lower is better)
Translates to: HVISEMSMGHLGNII*KSGDRSGLTIQTGM
Trigger: CATTCCAGTTTGTATCGTCAGCCCAGACCTGTCCCCTGACTTTCAGATGATATTTCCTAGATGCCCCATAGACATCTCAGATATAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR GCA 90 bp AGGGCTCCCAGGCATTGTGCTTCCTTCTTAATGGTTGGAGTGAGATaGAATAATTGTCTTTTACTTTCAAGAGAATGTCCCTGCCACATC +
Preference number: 1 (lower is better)
Translates to: RAPRHCASFLMVGVR*NNCLLLSRECPCHI
Trigger: GATGTGGCAGGGACATTCTCTTGAAAGTAAAAGACAATTATTGCATCTCACTCCAACCATTAAGAAGGAAGCACAATGCCTGGGAGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 90 bp GTTTCAGTTACCTGCAGGGTGGTGAAATATAGTAGTAACTTCATCTaGCTGACATGGGGGAAGTTTAGAGGTGTCCTTGGCATATTCACA +
Preference number: 1 (lower is better)
Translates to: VSVTCRVVKYSSNFI*LTWGKFRGVLGIFT
Trigger: TGTGAATATGCCAAGGACACCTCTAAACTTCCCCCATGTCAGTCAGATGAAGTTACTACTATATTTCACCACCCTGCAGGTAACTGAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 90 bp CCAGCTACCTGTTCCTTCACCACAGAACACAGTAAATGCATTATCTaGGTCTCCTGCCATTTTTCAAACCTGGGATTCTCTAATGATATC +
Preference number: 1 (lower is better)
Translates to: PATCSFTTEHSKCII*VSCHFSNLGFSNDI
Trigger: GATATCATTAGAGAATCCCAGGTTTGAAAAATGGCAGGAGACCCAGATAATGCATTTACTGTGTTCTGTGGTGAAGGAACAGGTAGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 90 bp ATTTCAAGAGAAATTTCATTATGTATCTTCTACAGAGCCCTAAACTaGGAGCGCCAGCGTATTCAAATAAACCCTGAGGTGTGGGAGGCT +
Preference number: 1 (lower is better)
Translates to: ISREISLCIFYRALN*ERQRIQINPEVWEA
Trigger: AGCCTCCCACACCTCAGGGTTTATTTGAATACGCTGGCGCTCTCAGTTTAGGGCTCTGTAGAAGATACATAATGAAATTTCTCTTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 90 bp CCAAAGCACATCTCTGCAATCATTCTACTTTCCAACTATCACCACTaGAGGCTTTCAGCCAGAGAGCAATTTGTTTTCAACTTACTCTGG +
Preference number: 1 (lower is better)
Translates to: PKHISAIILLSNYHH*RLSAREQFVFNLLW
Trigger: CCAGAGTAAGTTGAAAACAAATTGCTCTCTGGCTGAAAGCCTTCAGTGGTGATAGTTGGAAAGTAGAATGATTGCAGAGATGTGCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 90 bp ATTAAAAACCAGCATTTGATTGGATGTCTTGATCTTCTTGGATCTTaGAACCAACCTCCCCAGGTTATGAGTAAGTCCATCCCTGACAGT +
Preference number: 1 (lower is better)
Translates to: IKNQHLIGCLDLLGS*NQPPQVMSKSIPDS
Trigger: ACTGTCAGGGATGGACTTACTCATAACCTGGGGAGGTTGGTTTCAAGATCCAAGAAGATCAAGACATCCAATCAAATGCTGGTTTTTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 90 bp ACCAAGGTTGACAGGCACAAGTTTAAGAACCTGATATTCTATAAATaGAAAAGGCCAGCTACCTGTTCCTTCACCACAGAACACAGTAAA +
Preference number: 1 (lower is better)
Translates to: TKVDRHKFKNLIFYK*KRPATCSFTTEHSK
Trigger: TTTACTGTGTTCTGTGGTGAAGGAACAGGTAGCTGGCCTTTTTCATTTATAGAATATCAGGTTCTTAAACTTGTGCCTGTCAACCTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 90 bp CATAGTAATCTTGATGTTTCTTTTAGTGGAAGTGTTCCTCCTTTGTaGCTCAAAACCTCTAAACCTGCAGAGCCCAGAACTATGAGAACA +
Preference number: 1 (lower is better)
Translates to: HSNLDVSFSGSVPPL*LKTSKPAEPRTMRT
Trigger: TGTTCTCATAGTTCTGGGCTCTGCAGGTTTAGAGGTTTTGAGTCACAAAGGAGGAACACTTCCACTAAAAGAAACATCAAGATTACTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 90 bp ATTGTTAACAAAAACTGGAAGAGCTATGTTATAGGCCCACTTCCTTaGAAAGTAGACTCTGAGATGGAGATTAGCATGCGGGAAGTTTAT +
Preference number: 1 (lower is better)
Translates to: IVNKNWKSYVIGPLP*KVDSEMEISMREVY
Trigger: ATAAACTTCCCGCATGCTAATCTCCATCTCAGAGTCTACTTTCCAAGGAAGTGGGCCTATAACATAGCTCTTCCAGTTTTTGTTAACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
3UTR CCA 90 bp GCTCCCATTTGTAACTACTGCTCAGTATACACCTACCCCACAGAATaGATGCTCAGGAAATGGTTGCTAAATAAACGAATAAATCTAAAA +
Preference number: 1 (lower is better)
Translates to: APICNYCSVYTYPTE*MLRKWLLNKRINLK
Trigger: TTTTAGATTTATTCGTTTATTTAGCAACCATTTCCTGAGCATCCATTCTGTGGGGTAGGTGTATACTGAGCAGTAGTTACAAATGGGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 90 bp CAAAATCTGAATGTAACTAACACAGCTTTACCTTATCCACTTGCCTaGGATGGTACTTATGCTAATCCTATTCCAAGCAAAAGCAACTCA +
Preference number: 1 (lower is better)
Translates to: QNLNVTNTALPYPLA*DGTYANPIPSKSNS
Trigger: TGAGTTGCTTTTGCTTGGAATAGGATTAGCATAAGTACCATCCCAGGCAAGTGGATAAGGTAAAGCTGTGTTAGTTACATTCAGATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR CCA 90 bp AACACAGTAAATGCATTATCTGGGTCTCCTGCCATTTTTCAAACCTaGGATTCTCTAATGATATCTGTTTGGGCAACTTTAAACTTCATT +
Preference number: 1 (lower is better)
Translates to: NTVNALSGSPAIFQT*DSLMISVWATLNFI
Trigger: AATGAAGTTTAAAGTTGCCCAAACAGATATCATTAGAGAATCCCAGGTTTGAAAAATGGCAGGAGACCCAGATAATGCATTTACTGTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR GCA 90 bp GGCCGGCCCACCCAGGAATGCCCATCCAATCGGTCCAGACTGGGATTTGGAGCCGACTGTCTGCTCGGCTaGGTGGACTATCAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: GRPTQECPSNRSRLGFGADCLLG*VDYQRP
Trigger: TGGCCTCTGATAGTCCACGCAGCCGAGCAGACAGTC...GGCTCCAAATCCCAGTCTGGACCGATTGGATGGGCATTCCTGGGTGGGCCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR CAA 90 bp GCCGGCCCACCCAGGAATGCCCATCCAATCGGTCCAGACTGGGATTaGGAGCCTGTCTGTGGCCTACTGGCTCAGTCACCTTGGGCAAGT +
Preference number: 2 (lower is better)
Translates to: AGPPRNAHPIGPDWD*EPVCGLLAQSPWAS
Trigger: ACTTGCCCAAGGTGACTGAGCCAGTAGGCCACAGACAGGCTCCAAATCCCAGTCTGGACCGATTGGATGGGCATTCCTGGGTGGGCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR-3UTR GCA 90 bp GGTCTGGGCAGCACAGGATGGTGTCCACTACAGCCCACATTTGTGCTGCTCAGCGCCCATTTTCCTCTCTaGCTGGCCCAGGGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: GLGSTGWCPLQPTFVLLSAHFPL*LAQGWN
Trigger: GTTCCAGCCCTGGGCCAGGCAGAGAGGAAAATGGGC...GCTGAGCAGCACAAATGTGGGCTGTAGTGGACACCATCCTGTGCTGCCCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CCA 90 bp CTGCGCCTCCGCTCTGGGTTCCACACCATCTGTCGGTCCACACGCTTGGGATTAATTTTCCTCTCTGCCTaGCCCAGGGCTGGAACCGTC +
Preference number: 2 (lower is better)
Translates to: LRLRSGFHTICRSTRLGLIFLSA*PRAGTV
Trigger: GACGGTTCCAGCCCTGGGCCAGGCAGAGAGGAAAAT...TAATCCCAAGCGTGTGGACCGACAGATGGTGTGGAACCCAGAGCGGAGGCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR-3UTR TCA 90 bp AGCTGCGCCTCCGCTCTGGGTTCCACACCATCTGTCGGTCCACACGCTTGGGATACTCAAAAGCGTCTTTaGACGGCAGAGACAGGCCCA +
Preference number: 2 (lower is better)
Translates to: SCASALGSTPSVGPHAWDTQKRL*TAETGP
Trigger: TGGGCCTGTCTCTGCCGTTCAAAGACGCTTTTGAGT...ATCCCAAGCGTGTGGACCGACAGATGGTGTGGAACCCAGAGCGGAGGCGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR-3UTR GCA 90 bp GGACTTAGGAGTTGGACAGGCCACTCTAGAGGTCAATGTGGAGAGGGGACTGGCGCCCATTTTCCTCTCTaGCTGGCCCAGGGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: GLRSWTGHSRGQCGEGTGAHFPL*LAQGWN
Trigger: GTTCCAGCCCTGGGCCAGGCAGAGAGGAAAATGGGC...GCCAGTCCCCTCTCCACATTGACCTCTAGAGTGGCCTGTCCAACTCCTAAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR-3UTR GCA 90 bp CTGAGAGCACTCCCAGTAGCTGTGGGAAGAGGCCCAGGAAGCATGGTGGCTGGGTCCGAATCCTCTGTCTaGAAAGGAACGGCACCATGG +
Preference number: 2 (lower is better)
Translates to: LRALPVAVGRGPGSMVAGSESSV*KGTAPW
Trigger: CCATGGTGCCGTTCCTTTGCAGACAGAGGATTCGGA...CCCAGCCACCATGCTTCCTGGGCCTCTTCCCACAGCTACTGGGAGTGCTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR GCA 90 bp ACCCAGGAATGCCCATCCAATCGGTCCAGACTGGGATTTGGAGCCTGTCTGTGGGAGGCACGGGGGCGGTaGCATCCATTCATGAGCACA +
Preference number: 2 (lower is better)
Translates to: TQECPSNRSRLGFGACLWEARGR*HPFMST
Trigger: TGTGCTCATGAATGGATGGCACCGCCCCCGTGCCTC...CCACAGACAGGCTCCAAATCCCAGTCTGGACCGATTGGATGGGCATTCCTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR-3UTR CCA 90 bp GAGAGGCACCAGAGCTATCTAAACTCAGGGGGATGGAACCGAGTGAGCGGCAGCATTTTCCTCTCTGCCTaGCCCAGGGCTGGAACCGTC +
Preference number: 2 (lower is better)
Translates to: ERHQSYLNSGGWNRVSGSIFLSA*PRAGTV
Trigger: GACGGTTCCAGCCCTGGGCCAGGCAGAGAGGAAAAT...GCTGCCGCTCACTCGGTTCCATCCCCCTGAGTTTAGATAGCTCTGGTGCCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CCA 90 bp GGACTTAGGAGTTGGACAGGCCACTCTAGAGGTCAATGTGGAGAGGGGACTGGCGTCTGCTCGGCTGCGTaGACTATCAGAGGCCAGCCT +
Preference number: 2 (lower is better)
Translates to: GLRSWTGHSRGQCGEGTGVCSAA*TIRGQP
Trigger: AGGCTGGCCTCTGATAGTCCACGCAGCCGAGCAGAC...GCCAGTCCCCTCTCCACATTGACCTCTAGAGTGGCCTGTCCAACTCCTAAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR-3UTR CCA 90 bp TGTCCCTGCCACATCCCAGACCATTGGCCCCTAAAAATCTCACTGCACCCTGCCCTAAACTCAGGGGGATaGAACCGAGTGAGCGGCAGC +
Preference number: 2 (lower is better)
Translates to: CPCHIPDHWPLKISLHPALNSGG*NRVSGS
Trigger: GCTGCCGCTCACTCGGTTCCATCCCCCTGAGTTTAG...GGCAGGGTGCAGTGAGATTTTTAGGGGCCAATGGTCTGGGATGTGGCAGGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR GCA 90 bp GGCTCTGCCAGCTCATCTGTCCCACACCGCATGGCCACTTGTGTTGTAGCCTGGTCAAGAGAATGTCCCTaGCACATCCCAGACCATTGG +
Preference number: 2 (lower is better)
Translates to: GSASSSVPHRMATCVVAWSRECP*HIPDHW
Trigger: CCAATGGTCTGGGATGTGGCAGGGACATTCTCTTGA...CCAGGCTACAACACAAGTGGCCATGCGGTGTGGGACAGATGAGCTGGCAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CCA 90 bp TGTCCCTGCCACATCCCAGACCATTGGCCCCTAAAAATCTCACTGCACCCTGCCCAAACCACCAGGACTTaGTTGGCTGAGGGTGGGAGA +
Preference number: 2 (lower is better)
Translates to: CPCHIPDHWPLKISLHPAQTTRT*LAEGGR
Trigger: TCTCCCACCCTCAGCCAACCAAGTCCTGGTGGTTTG...GGCAGGGTGCAGTGAGATTTTTAGGGGCCAATGGTCTGGGATGTGGCAGGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CCA 90 bp TCACATCTTCATCTTCATCATCATCAAGTGTTTAGGCCTCACCCGGGAGCAACGTATCAGAGGCCAGCCTaGAGGCACGGGGGCGGTGCC +
Preference number: 2 (lower is better)
Translates to: SHLHLHHHQVFRPHPGATYQRPA*RHGGGA
Trigger: GGCACCGCCCCCGTGCCTCCAGGCTGGCCTCTGATA...CGTTGCTCCCGGGTGAGGCCTAAACACTTGATGATGATGAAGATGAAGATGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR CAA 90 bp GGAGCAACGGGGCCAGTAAAAAGCTTTCTGCCCGGTGTGGGAAGGTaGGACTTAGGAGTTGGACAGGCCACTCTAGAGGTCAATGTGGAG +
Preference number: 2 (lower is better)
Translates to: GATGPVKSFLPGVGR*DLGVGQATLEVNVE
Trigger: CTCCACATTGACCTCTAGAGTGGCCTGTCCAACTCCTAAGTCCAACCTTCCCACACCGGGCAGAAAGCTTTTTACTGGCCCCGTTGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR-3UTR TCA 90 bp TGTCCCTGCCACATCCCAGACCATTGGCCCCTAAAAATCTCACTGCACCCTGCCATGTGGGGTCTAGGCTaGCTCCTTGAGTTCCTAGCT +
Preference number: 2 (lower is better)
Translates to: CPCHIPDHWPLKISLHPAMWGLG*LLEFLA
Trigger: AGCTAGGAACTCAAGGAGTCAGCCTAGACCCCACAT...GGCAGGGTGCAGTGAGATTTTTAGGGGCCAATGGTCTGGGATGTGGCAGGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR GCA 90 bp CTCTCAGGGTTTCTGAGCTGGTGCCCCAGCTGTGCCTTCGACACAGTTGCAAGCGGTTTTTCCATACTCTaGTTGCTCTGCCAGGCATGC +
Preference number: 2 (lower is better)
Translates to: LSGFLSWCPSCAFDTVASGFSIL*LLCQAC
Trigger: GCATGCCTGGCAGAGCAAGCAGAGTATGGAAAAACC...GCTTGCAACTGTGTCGAAGGCACAGCTGGGGCACCAGCTCAGAAACCCTGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR GCA 90 bp GGCTCTGCCAGCTCATCTGTCCCACACCGCATGGCCACTTGTGTTGTAGCCTGGATAGGCATGAACCAATaGACCCGGCCTCAACCTTTT +
Preference number: 2 (lower is better)
Translates to: GSASSSVPHRMATCVVAWIGMNQ*TRPQPF
Trigger: AAAAGGTTGAGGCCGGGTGCATTGGTTCATGCCTAT...CCAGGCTACAACACAAGTGGCCATGCGGTGTGGGACAGATGAGCTGGCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CAA 90 bp GCTCCGATGCTGTATGAAGACCTCAGCCAGTCTCATGGGAGGGTCTaGAAGCTGAGATGGCCCTTCCAAGTTGTCAAGTTGAGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: APMLYEDLSQSHGRV*KLRWPFQVVKLRQW
Trigger: CCACTGCCTCAACTTGACAACTTGGAAGGGCCATCTCAGCTTCAAGACCCTCCCATGAGACTGGCTGAGGTCTTCATACAGCATCGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
3UTR-3UTR CCA 90 bp CCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGGGGTATGTCAGTGAGTTAGTAGCCTCAGCATaGGGGCTCTGGAGACCAACG +
Preference number: 2 (lower is better)
Translates to: PGLHNLELTCLGKGYVSELVASA*GLWRPT
Trigger: CGTTGGTCTCCAGAGCCCCCATGCTGAGGCTACTAA...CTCACTGACATACCCCTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CCA 90 bp CATCCAATCGGTCCAGACTGGGATTTGGAGCCTGTCTGTGGCCTACTGGCTCAGCCCTTAGGCATGAATTaGACTGACCCAGCAGAAGTT +
Preference number: 2 (lower is better)
Translates to: HPIGPDWDLEPVCGLLAQPLGMN*TDPAEV
Trigger: AACTTCTGCTGGGTCAGTCCAATTCATGCCTAAGGG...CTGAGCCAGTAGGCCACAGACAGGCTCCAAATCCCAGTCTGGACCGATTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR CAA 90 bp TACTGGCAGGCCGAACACTCAGCAGCAGCAATAGCTAGATCAGTCTaGGTGAGTGGGAGCCATGCCATACCATCTGATATGGTTTGGCTC +
Preference number: 2 (lower is better)
Translates to: YWQAEHSAAAIARSV*VSGSHAIPSDMVWL
Trigger: GAGCCAAACCATATCAGATGGTATGGCATGGCTCCCACTCACCAAGACTGATCTAGCTATTGCTGCTGCTGAGTGTTCGGCCTGCCAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR TCA 90 bp CTCTCAGGGTTTCTGAGCTGGTGCCCCAGCTGTGCCTTCGACACAGTTGCAAGCTTTAAAACACACATCTaGTTAGGTCCCTCACCTCCT +
Preference number: 2 (lower is better)
Translates to: LSGFLSWCPSCAFDTVASFKTHI*LGPSPP
Trigger: AGGAGGTGAGGGACCTAATCAGATGTGTGTTTTAAA...GCTTGCAACTGTGTCGAAGGCACAGCTGGGGCACCAGCTCAGAAACCCTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR TCA 90 bp ACAGTTGCAAGCTGGCAGCTTCAGGATAGCGCAGTAGATGAAAGGACAAGTGGATGGGCAGTAACAAACTaGGCCTTTGCCCCATCTGGC +
Preference number: 2 (lower is better)
Translates to: TVASWQLQDSAVDERTSGWAVTN*AFAPSG
Trigger: GCCAGATGGGGCAAAGGCTCAGTTTGTTACTGCCCA...TCCACTTGTCCTTTCATCTACTGCGCTATCCTGAAGCTGCCAGCTTGCAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR TCA 90 bp CCAGTAAAAAGCTTTCTGCCCGGTGTGGGAAGGTTGGACTTAGGAGTTGGACAGGGTGCCATCCATTCATaGGCACATATGCATGGAGCC +
Preference number: 2 (lower is better)
Translates to: PVKSFLPGVGRLDLGVGQGAIHS*AHMHGA
Trigger: GGCTCCATGCATATGTGCTCATGAATGGATGGCACC...CTGTCCAACTCCTAAGTCCAACCTTCCCACACCGGGCAGAAAGCTTTTTACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR-3UTR GCA 90 bp CTGCTGAGCCCTTTCCTGCTCTGGGCCCCAATCAAAACACAACTTTCTGTGTCAAGGTGTGAGCTACCATaGCCAACCAGGACCTCCAAA +
Preference number: 2 (lower is better)
Translates to: LLSPFLLWAPIKTQLSVSRCELP*PTRTSK
Trigger: TTTGGAGGTCCTGGTTGGGCATGGTAGCTCACACCT...TGACACAGAAAGTTGTGTTTTGATTGGGGCCCAGAGCAGGAAAGGGCTCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR GCA 90 bp CCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGGGGTATGTCAGTGAGCAGTGGATGGCTAGGTaGATGATGCACAACCTATGC +
Preference number: 2 (lower is better)
Translates to: PGLHNLELTCLGKGYVSEQWMAR*MMHNLC
Trigger: GCATAGGTTGTGCATCATGCACCTAGCCATCCACTG...CTCACTGACATACCCCTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR TCA 90 bp ACAGTTGCAAGCTGGCAGCTTCAGGATAGCGCAGTAGATGAAAGGACAAGTGGAACTCAAAAGCGTCTTTaGACGGCAGAGACAGGCCCA +
Preference number: 2 (lower is better)
Translates to: TVASWQLQDSAVDERTSGTQKRL*TAETGP
Trigger: TGGGCCTGTCTCTGCCGTTCAAAGACGCTTTTGAGT...TCCACTTGTCCTTTCATCTACTGCGCTATCCTGAAGCTGCCAGCTTGCAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CCA 90 bp CCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGGGGTATGTCAGTGAGAAAGGAACGGCACCATaGGAAAATCTAGCACAGCCA +
Preference number: 2 (lower is better)
Translates to: PGLHNLELTCLGKGYVSEKGTAP*ENLAQP
Trigger: TGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTT...CTCACTGACATACCCCTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CCA 90 bp CTCCACGTGAATCAACTGAGTACCAAAGATATACCTCCCTTCCCTCCATTGCTTGGAAGAAGGGGTAGTTaGCTGGCTCTCGCAGGCTCA +
Preference number: 2 (lower is better)
Translates to: LHVNQLSTKDIPPFPPLLGRRGS*LALAGS
Trigger: TGAGCCTGCGAGAGCCAGCCAACTACCCCTTCTTCC...AAGCAATGGAGGGAAGGGAGGTATATCTTTGGTACTCAGTTGATTCACGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CCA 90 bp TGTCCCTGCCACATCCCAGACCATTGGCCCCTAAAAATCTCACTGCACCCTGCCATGAAGCTTACATTCTaGGAGTGGGGAGATAGACAA +
Preference number: 2 (lower is better)
Translates to: CPCHIPDHWPLKISLHPAMKLTF*EWGDRQ
Trigger: TTGTCTATCTCCCCACTCCCAGAATGTAAGCTTCAT...GGCAGGGTGCAGTGAGATTTTTAGGGGCCAATGGTCTGGGATGTGGCAGGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CAA 90 bp TTCTCAAGAGATCCGATGGTTTCAAAGTGTTTGGCAGTTCCCCCTTaGCACTCTCTCTCTCCCCTGCTGTCTTGTGAAGAAGATGCCTGC +
Preference number: 2 (lower is better)
Translates to: FSRDPMVSKCLAVPP*HSLSPLLSCEEDAC
Trigger: GCAGGCATCTTCTTCACAAGACAGCAGGGGAGAGAGAGAGTGCAAAGGGGGAACTGCCAAACACTTTGAAACCATCGGATCTCTTGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR TCA 90 bp AGCTTTCTGCCCGGTGTGGGAAGGTTGGACTTAGGAGTTGGACAGGCCACTCTAAGTAGTAACTTCATCTaGCTGACATGGGGGAAGTTT +
Preference number: 2 (lower is better)
Translates to: SFLPGVGRLDLGVGQATLSSNFI*LTWGKF
Trigger: AAACTTCCCCCATGTCAGTCAGATGAAGTTACTACT...TAGAGTGGCCTGTCCAACTCCTAAGTCCAACCTTCCCACACCGGGCAGAAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR-3UTR TCA 90 bp ACAGTTGCAAGCTGGCAGCTTCAGGATAGCGCAGTAGATGAAAGGACAAGTGGATACAGAGCCCTAAACTaGGAGCGCCAGCGTATTCAA +
Preference number: 2 (lower is better)
Translates to: TVASWQLQDSAVDERTSGYRALN*ERQRIQ
Trigger: TTGAATACGCTGGCGCTCTCAGTTTAGGGCTCTGTA...TCCACTTGTCCTTTCATCTACTGCGCTATCCTGAAGCTGCCAGCTTGCAACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR TCA 90 bp CTCTCAGGGTTTCTGAGCTGGTGCCCCAGCTGTGCCTTCGACACAGTTGCAAGCCTGATATTCTATAAATaGAAAAGGCCAGCTACCTGT +
Preference number: 2 (lower is better)
Translates to: LSGFLSWCPSCAFDTVASLIFYK*KRPATC
Trigger: ACAGGTAGCTGGCCTTTTTCATTTATAGAATATCAG...GCTTGCAACTGTGTCGAAGGCACAGCTGGGGCACCAGCTCAGAAACCCTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CCA 90 bp CTCCACGTGAATCAACTGAGTACCAAAGATATACCTCCCTTCCCTCCATTGCTTATAAACCCTGAGGTGTaGGAGGCTTCGGGCCAGTTC +
Preference number: 2 (lower is better)
Translates to: LHVNQLSTKDIPPFPPLLINPEV*EASGQF
Trigger: GAACTGGCCCGAAGCCTCCCACACCTCAGGGTTTAT...AAGCAATGGAGGGAAGGGAGGTATATCTTTGGTACTCAGTTGATTCACGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CCA 90 bp CTGCTGAGCCCTTTCCTGCTCTGGGCCCCAATCAAAACACAACTTTCTGTGTCAGAGTGTCTGGCTTGCTaGTACTGCCAATGGAAAGAA +
Preference number: 2 (lower is better)
Translates to: LLSPFLLWAPIKTQLSVSECLAC*YCQWKE
Trigger: TTCTTTCCATTGGCAGTACCAGCAAGCCAGACACTC...TGACACAGAAAGTTGTGTTTTGATTGGGGCCCAGAGCAGGAAAGGGCTCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CAA 90 bp AGACTGGGATTTGGAGCCTGTCTGTGGCCTACTGGCTCAGTCACCTaGGGCAAGTCATTTAACTTCTCTGAGCCATCAGCTTTTCATTTG +
Preference number: 2 (lower is better)
Translates to: RLGFGACLWPTGSVT*GKSFNFSEPSAFHL
Trigger: CAAATGAAAAGCTGATGGCTCAGAGAAGTTAAATGACTTGCCCAAGGTGACTGAGCCAGTAGGCCACAGACAGGCTCCAAATCCCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR-3UTR TCA 90 bp CCAGTAAAAAGCTTTCTGCCCGGTGTGGGAAGGTTGGACTTAGGAGTTGGACAGGTAACTTCATCTGACTaGCATGGGGGAAGTTTAGAG +
Preference number: 2 (lower is better)
Translates to: PVKSFLPGVGRLDLGVGQVTSSD*HGGSLE
Trigger: CTCTAAACTTCCCCCATGTCAGTCAGATGAAGTTAC...CTGTCCAACTCCTAAGTCCAACCTTCCCACACCGGGCAGAAAGCTTTTTACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR-3UTR TCA 90 bp GGTACATGGATGGAGCATATTCCTAGGTGTGGGATATGCTGTCTCCAAAACCTAAGCGGCAGCGGTAATTaGGTTTCAGTTACCTGCAGG +
Preference number: 2 (lower is better)
Translates to: GTWMEHIPRCGICCLQNLSGSGN*VSVTCR
Trigger: CCTGCAGGTAACTGAAACTCAATTACCGCTGCCGCT...TAGGTTTTGGAGACAGCATATCCCACACCTAGGAATATGCTCCATCCATGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR TCA 90 bp AAAGTAGACTCTGAGATGGAGATTAGCATGCGGGAAGTTTATCAGGGATTGCTCCAGACAGGGGAGTTCTaGGAGGCACCAGAGCTATCT +
Preference number: 2 (lower is better)
Translates to: KVDSEMEISMREVYQGLLQTGEF*EAPELS
Trigger: AGATAGCTCTGGTGCCTCTCAGAACTCCCCTGTCTG...GAGCAATCCCTGATAAACTTCCCGCATGCTAATCTCCATCTCAGAGTCTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR TCA 90 bp CTCCACGTGAATCAACTGAGTACCAAAGATATACCTCCCTTCCCTCCATTGCTTTCTTTGAGACTGAGGTaGGTCTTGCTCTGTCGCCCA +
Preference number: 2 (lower is better)
Translates to: LHVNQLSTKDIPPFPPLLSLRLR*VLLCRP
Trigger: TGGGCGACAGAGCAAGACTCACCTCAGTCTCAAAGA...AAGCAATGGAGGGAAGGGAGGTATATCTTTGGTACTCAGTTGATTCACGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CCA 90 bp TGTCCCTGCCACATCCCAGACCATTGGCCCCTAAAAATCTCACTGCACCCTGCCGTTTTCAACTTACTCTaGGTTCCTAAGTTAGCAGAA +
Preference number: 2 (lower is better)
Translates to: CPCHIPDHWPLKISLHPAVFNLL*VPKLAE
Trigger: TTCTGCTAACTTAGGAACCCAGAGTAAGTTGAAAAC...GGCAGGGTGCAGTGAGATTTTTAGGGGCCAATGGTCTGGGATGTGGCAGGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CAA 90 bp ATGATAGTGAGTGACTTCTCAAGAGATCCGATGGTTTCAAAGTGTTaGGCAGTTCCCCCTTTGCACTCTCTCTCTCCCCTGCTGTCTTGT +
Preference number: 2 (lower is better)
Translates to: MIVSDFSRDPMVSKC*AVPPLHSLSPLLSC
Trigger: ACAAGACAGCAGGGGAGAGAGAGAGTGCAAAGGGGGAACTGCCAAACACTTTGAAACCATCGGATCTCTTGAGAAGTCACTCACTATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR GCA 90 bp CCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGGGGTATGTCAGTGAGCGTTCATGGAAATTCTaGACATGCATCAAGGAGAAA +
Preference number: 2 (lower is better)
Translates to: PGLHNLELTCLGKGYVSERSWKF*TCIKEK
Trigger: TTTCTCCTTGATGCATGTGCAGAATTTCCATGAACG...CTCACTGACATACCCCTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CCA 90 bp TCACATCTTCATCTTCATCATCATCAAGTGTTTAGGCCTCACCCGGGAGCAACGAAAGGAACGGCACCATaGGAAAATCTAGCACAGCCA +
Preference number: 2 (lower is better)
Translates to: SHLHLHHHQVFRPHPGATKGTAP*ENLAQP
Trigger: TGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTT...CGTTGCTCCCGGGTGAGGCCTAAACACTTGATGATGATGAAGATGAAGATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR CAA 90 bp GGCAGAATCCAGCTCATGATGAACAGCTTTGGTCACATGGTCAACTaGATGATCCATGGTCTGATGATCTGTCTCTACCAGAACCCTGTA +
Preference number: 2 (lower is better)
Translates to: GRIQLMMNSFGHMVN*MIHGLMICLYQNPV
Trigger: TACAGGGTTCTGGTAGAGACAGATCATCAGACCATGGATCATCAAGTTGACCATGTGACCAAAGCTGTTCATCATGAGCTGGATTCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CAA 90 bp GCCCACTCCTATAGGTCCAACTACATGCCTCCACCACAGGTCTCCTaGTTTCCAATTTTCCAATCTTATTCCTTTCAGACCCCTTACCAA +
Preference number: 2 (lower is better)
Translates to: AHSYRSNYMPPPQVS*FPIFQSYSFQTPYQ
Trigger: TTGGTAAGGGGTCTGAAAGGAATAAGATTGGAAAATTGGAAACAAGGAGACCTGTGGTGGAGGCATGTAGTTGGACCTATAGGAGTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CAA 90 bp TTTATACACCCATTGTGTCAGCTCTGGGGTGGCCTCAGAGACTGGTaGATGTCAACTGTGTGTACATTGTTGTTTAGTGCTTCTCCATGG +
Preference number: 2 (lower is better)
Translates to: FIHPLCQLWGGLRDW*MSTVCTLLFSASPW
Trigger: CCATGGAGAAGCACTAAACAACAATGTACACACAGTTGACATCAACCAGTCTCTGAGGCCACCCCAGAGCTGACACAATGGGTGTATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR GCA 90 bp CTGCTGAGCCCTTTCCTGCTCTGGGCCCCAATCAAAACACAACTTTCTGTGTCATTTAAACATGAAGCTTaGTACTTCCTGTCTCCCTAC +
Preference number: 2 (lower is better)
Translates to: LLSPFLLWAPIKTQLSVSFKHEA*YFLSPY
Trigger: GTAGGGAGACAGGAAGTAGCAAGCTTCATGTTTAAA...TGACACAGAAAGTTGTGTTTTGATTGGGGCCCAGAGCAGGAAAGGGCTCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR GCA 90 bp CTCCACGTGAATCAACTGAGTACCAAAGATATACCTCCCTTCCCTCCATTGCTTCTGCTGCACCTCCTTTaGTGTGGAATCATATGGGAT +
Preference number: 2 (lower is better)
Translates to: LHVNQLSTKDIPPFPPLLLLHLL*CGIIWD
Trigger: ATCCCATATGATTCCACAGCAAAGGAGGTGCAGCAG...AAGCAATGGAGGGAAGGGAGGTATATCTTTGGTACTCAGTTGATTCACGTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CCA 90 bp TGTTCCTTCACCACAGAACACAGTAAATGCATTATCTGGGTCTCCTGCCATTTTGTGATAGCAACCGTATaGCGCTTCCTAGTGACAGCC +
Preference number: 2 (lower is better)
Translates to: CSFTTEHSKCIIWVSCHFVIATV*RFLVTA
Trigger: GGCTGTCACTAGGAAGCGCCATACGGTTGCTATCAC...AAAATGGCAGGAGACCCAGATAATGCATTTACTGTGTTCTGTGGTGAAGGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CCA 90 bp GGTACATGGATGGAGCATATTCCTAGGTGTGGGATATGCTGTCTCCAAAACCTAACCTACCCCACAGAATaGATGCTCAGGAAATGGTTG +
Preference number: 2 (lower is better)
Translates to: GTWMEHIPRCGICCLQNLTYPTE*MLRKWL
Trigger: CAACCATTTCCTGAGCATCCATTCTGTGGGGTAGGT...TAGGTTTTGGAGACAGCATATCCCACACCTAGGAATATGCTCCATCCATGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CCA 90 bp GGTCCCTCACCTCCTCAAAAACTTCCCATGGTATCCCATTATCTGAAGGCCAAAGAACATGCAGATGTCTaGGGAAAGAGCATTGCAACT +
Preference number: 2 (lower is better)
Translates to: GPSPPQKLPMVSHYLKAKEHADV*GKSIAT
Trigger: AGTTGCAATGCTCTTTCCCCAGACATCTGCATGTTC...TTTGGCCTTCAGATAATGGGATACCATGGGAAGTTTTTGAGGAGGTGAGGGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CCA 90 bp CCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGGGGTATGTCAGTGAGGCATTAAAGAATAGTTaGGAGGGAGTGCTATTGTAT +
Preference number: 2 (lower is better)
Translates to: PGLHNLELTCLGKGYVSEALKNS*EGVLLY
Trigger: ATACAATAGCACTCCCTCCCAACTATTCTTTAATGC...CTCACTGACATACCCCTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CCA 90 bp CTCCACGTGAATCAACTGAGTACCAAAGATATACCTCCCTTCCCTCCATTGCTTTTACTTCTCAGTGTGTaGGCAAGATTGGGAGGGATG +
Preference number: 2 (lower is better)
Translates to: LHVNQLSTKDIPPFPPLLLLLSV*ARLGGM
Trigger: CATCCCTCCCAATCTTGCCCACACACTGAGAAGTAA...AAGCAATGGAGGGAAGGGAGGTATATCTTTGGTACTCAGTTGATTCACGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CCA 90 bp CTGCTGAGCCCTTTCCTGCTCTGGGCCCCAATCAAAACACAACTTTCTGTGTCATCCTACCTATCCTTCTaGCTTTGGTTCAAACATGAA +
Preference number: 2 (lower is better)
Translates to: LLSPFLLWAPIKTQLSVSSYLSF*LWFKHE
Trigger: TTCATGTTTGAACCAAAGCCAGAAGGATAGGTAGGA...TGACACAGAAAGTTGTGTTTTGATTGGGGCCCAGAGCAGGAAAGGGCTCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CCA 90 bp GTCATGATAGTGAGTGACTTCTCAAGAGATCCGATGGTTTCAAAGTGTTTGGCAGATGGCACATACCTATaGTCCCAGACACTTGGGAGG +
Preference number: 2 (lower is better)
Translates to: VMIVSDFSRDPMVSKCLADGTYL*SQTLGR
Trigger: CCTCCCAAGTGTCTGGGACCATAGGTATGTGCCATC...TGCCAAACACTTTGAAACCATCGGATCTCTTGAGAAGTCACTCACTATCATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CAA 90 bp ATCACCTTCCAGATATCTCCACTTCTGGGTTTTTCCATACTCTGCTaGCTCTGCCAGGCATGCATCTCAACCACCCAATTAATTACTCCT +
Preference number: 2 (lower is better)
Translates to: ITFQISPLLGFSILC*LCQACISTTQLITP
Trigger: AGGAGTAATTAATTGGGTGGTTGAGATGCATGCCTGGCAGAGCAAGCAGAGTATGGAAAAACCCAGAAGTGGAGATATCTGGAAGGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CAA 90 bp GAACCCTGTAGCATCAAGAGTTGTTTCTTAAGAAGTATAAAATTCTaGGCTACAGATGGCATGGCCCTGCTCCAGAACCCCAGGTGTCTA +
Preference number: 2 (lower is better)
Translates to: EPCSIKSCFLRSIKF*ATDGMALLQNPRCL
Trigger: TAGACACCTGGGGTTCTGGAGCAGGGCCATGCCATCTGTAGCCAAGAATTTTATACTTCTTAAGAAACAACTCTTGATGCTACAGGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CAA 90 bp ACCTTGGGCAAGTCATTTAACTTCTCTGAGCCATCAGCTTTTCATTaGCCAAATGAGGATGGTGATACTATCTGCCTTGCAGGGTTGTCG +
Preference number: 2 (lower is better)
Translates to: TLGKSFNFSEPSAFH*PNEDGDTICLAGLS
Trigger: CGACAACCCTGCAAGGCAGATAGTATCACCATCCTCATTTGGCAAATGAAAAGCTGATGGCTCAGAGAAGTTAAATGACTTGCCCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR-3UTR TCA 90 bp AAAGTAGACTCTGAGATGGAGATTAGCATGCGGGAAGTTTATCAGGGATTGCTCTCTTCCAGGGAGAGCTaGAACGTTCAGATAAGTGAG +
Preference number: 2 (lower is better)
Translates to: KVDSEMEISMREVYQGLLSSRES*NVQISE
Trigger: CTCACTTATCTGAACGTTTCAGCTCTCCCTGGAAGA...GAGCAATCCCTGATAAACTTCCCGCATGCTAATCTCCATCTCAGAGTCTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR GCA 90 bp GCCACCATGCCTGGCTATTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTCTTGGCCTCCTGAAGTaGTGGGAATACAGGTGTGAG +
Preference number: 2 (lower is better)
Translates to: ATMPGYLLLLLLLLLLLFLGLLK*WEYRCE
Trigger: CTCACACCTGTATTCCCAGCACTTCAGGAGGCCAAG...AAACAACAACAACAACAACAACAACAACAACAACAAATAGCCAGGCATGGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR-3UTR TCA 90 bp CCACCATGCCTGGCTATTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTAGGCATGAATTGGACTaGCCCAGCAGAAGTTTGGCC +
Preference number: 2 (lower is better)
Translates to: PPCLAICCCCCCCCCCCFRHELD*PSRSLA
Trigger: GGCCAAACTTCTGCTGGGTCAGTCCAATTCATGCCT...AAAACAACAACAACAACAACAACAACAACAACAACAAATAGCCAGGCATGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR-3UTR GCA 90 bp AGGCTTTCAGCCAGAGAGCAATTTGTTTTCAACTTACTCTGGGTTCCTAAGTTAATACTCTGCTTGCTCTaGCAGGCATGCATCTCAACC +
Preference number: 2 (lower is better)
Translates to: RLSAREQFVFNLLWVPKLILCLL*QACIST
Trigger: GGTTGAGATGCATGCCTGGCAGAGCAAGCAGAGTAT...TAACTTAGGAACCCAGAGTAAGTTGAAAACAAATTGCTCTCTGGCTGAAAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR GCA 90 bp GGTACATGGATGGAGCATATTCCTAGGTGTGGGATATGCTGTCTCCAAAACCTATGGAAATTCTGCACATaGATCAAGGAGAAAACAGCC +
Preference number: 2 (lower is better)
Translates to: GTWMEHIPRCGICCLQNLWKFCT*IKEKTA
Trigger: GGCTGTTTTCTCCTTGATGCATGTGCAGAATTTCCA...TAGGTTTTGGAGACAGCATATCCCACACCTAGGAATATGCTCCATCCATGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR GCA 90 bp CTCCACGTGAATCAACTGAGTACCAAAGATATACCTCCCTTCCCTCCATTGCTTCTACACCACCATGGTTaGTGTTTATACACCCATTGT +
Preference number: 2 (lower is better)
Translates to: LHVNQLSTKDIPPFPPLLLHHHG*CLYTHC
Trigger: ACAATGGGTGTATAAACAGCAACCATGGTGGTGTAG...AAGCAATGGAGGGAAGGGAGGTATATCTTTGGTACTCAGTTGATTCACGTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR GCA 90 bp AACACAGCTTTACCTTATCCACTTGCCTGGGATGGTACTTATGCTAATCCTATTCAAACTAATAAAAGCTaGGCCTCCGCTCTGGGTTCC +
Preference number: 2 (lower is better)
Translates to: NTALPYPLAWDGTYANPIQTNKS*ASALGS
Trigger: GGAACCCAGAGCGGAGGCGCAGCTTTTATTAGTTTG...AATAGGATTAGCATAAGTACCATCCCAGGCAAGTGGATAAGGTAAAGCTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR-3UTR CCA 90 bp TGTTCCTTCACCACAGAACACAGTAAATGCATTATCTGGGTCTCCTGCCATTTTACCCTTTCACCATGTTaGGTGATAGCAACCGTATGG +
Preference number: 2 (lower is better)
Translates to: CSFTTEHSKCIIWVSCHFTLSPC*VIATVW
Trigger: CCATACGGTTGCTATCACCCAACATGGTGAAAGGGT...AAAATGGCAGGAGACCCAGATAATGCATTTACTGTGTTCTGTGGTGAAGGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CCA 90 bp GTCATGATAGTGAGTGACTTCTCAAGAGATCCGATGGTTTCAAAGTGTTTGGCAGACCTTATGACTTGGTaGATATGGCAGAATCCAGCT +
Preference number: 2 (lower is better)
Translates to: VMIVSDFSRDPMVSKCLADLMTW*IWQNPA
Trigger: AGCTGGATTCTGCCATATCCACCAAGTCATAAGGTC...TGCCAAACACTTTGAAACCATCGGATCTCTTGAGAAGTCACTCACTATCATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR TCA 90 bp CTCCACGTGAATCAACTGAGTACCAAAGATATACCTCCCTTCCCTCCATTGCTTCTATTAACACAAAAGTaGCCAGTTCCTGCTTCAAAT +
Preference number: 2 (lower is better)
Translates to: LHVNQLSTKDIPPFPPLLLLTQK*PVPASN
Trigger: ATTTGAAGCAGGAACTGGTCACTTTTGTGTTAATAG...AAGCAATGGAGGGAAGGGAGGTATATCTTTGGTACTCAGTTGATTCACGTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR TCA 90 bp GTCATGATAGTGAGTGACTTCTCAAGAGATCCGATGGTTTCAAAGTGTTTGGCATTACATGGAATACAATaGTCTTCACACTTGGTGCCC +
Preference number: 2 (lower is better)
Translates to: VMIVSDFSRDPMVSKCLALHGIQ*SSHLVP
Trigger: GGGCACCAAGTGTGAAGATCATTGTATTCCATGTAA...TGCCAAACACTTTGAAACCATCGGATCTCTTGAGAAGTCACTCACTATCATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CCA 90 bp CCACCATGCCTGGCTATTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTACCCTTTCACCATGTTaGGTGATAGCAACCGTATGG +
Preference number: 2 (lower is better)
Translates to: PPCLAICCCCCCCCCCCFTLSPC*VIATVW
Trigger: CCATACGGTTGCTATCACCCAACATGGTGAAAGGGT...AAAACAACAACAACAACAACAACAACAACAACAACAAATAGCCAGGCATGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR-3UTR TCA 90 bp GTCATGATAGTGAGTGACTTCTCAAGAGATCCGATGGTTTCAAAGTGTTTGGCAAAGACATGTTATATCTaGGATGTCTATGGGGCATCT +
Preference number: 2 (lower is better)
Translates to: VMIVSDFSRDPMVSKCLAKTCYI*DVYGAS
Trigger: AGATGCCCCATAGACATCTCAGATATAACATGTCTT...TGCCAAACACTTTGAAACCATCGGATCTCTTGAGAAGTCACTCACTATCATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR TCA 90 bp GCCACCATGCCTGGCTATTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTAGCTCTGCAGGGTGGTaGAATATAGTAGTAACTTCA +
Preference number: 2 (lower is better)
Translates to: ATMPGYLLLLLLLLLLLFSSAGW*NIVVTS
Trigger: TGAAGTTACTACTATATTTCACCACCCTGCAGAGCT...AAACAACAACAACAACAACAACAACAACAACAACAAATAGCCAGGCATGGTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR-3UTR CCA 90 bp AGCATCAAGAGTTGTTTCTTAAGAAGTATAAAATTCTTGGCTACAGATGGCATGCAGATAAGTGAGCTCTaGGAAGAAGGGGTAGTTGGC +
Preference number: 2 (lower is better)
Translates to: SIKSCFLRSIKFLATDGMQISEL*EEGVVG
Trigger: GCCAACTACCCCTTCTTCCCAGAGCTCACTTATCTG...CATGCCATCTGTAGCCAAGAATTTTATACTTCTTAAGAAACAACTCTTGATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CAA 90 bp TCGATTATTATTATTCTAGCTCCAATAGTTACTAGCAGTAGGAAATaGAAGGTGATGTTTCTGTTCAGTGAGCCTCAGGCTCCCATTTGT +
Preference number: 2 (lower is better)
Translates to: SIIIILAPIVTSSRK*KVMFLFSEPQAPIC
Trigger: ACAAATGGGAGCCTGAGGCTCACTGAACAGAAACATCACCTTCAATTTCCTACTGCTAGTAACTATTGGAGCTAGAATAATAATAATCGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CAA 90 bp AAAGCAAGTGAGGACAAGAACATGCAGATGTCTGGGGAAAGAGCATaGCAACTGGAACAGCAAATGCAAAGAAGTAATATATTAGAAGTA +
Preference number: 2 (lower is better)
Translates to: KASEDKNMQMSGERA*QLEQQMQRSNILEV
Trigger: TACTTCTAATATATTACTTCTTTGCATTTGCTGTTCCAGTTGCAATGCTCTTTCCCCAGACATCTGCATGTTCTTGTCCTCACTTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR GCA 90 bp AGCATCAAGAGTTGTTTCTTAAGAAGTATAAAATTCTTGGCTACAGATGGCATGTTATCTCTCCTTTATTaGTGTGTCCCCAGTGCCAGT +
Preference number: 2 (lower is better)
Translates to: SIKSCFLRSIKFLATDGMLSLLY*CVPSAS
Trigger: ACTGGCACTGGGGACACAGCAATAAAGGAGAGATAA...CATGCCATCTGTAGCCAAGAATTTTATACTTCTTAAGAAACAACTCTTGATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR GCA 90 bp CCACCATGCCTGGCTATTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTCATCAGCTTTTCATTTaGCAAATGAGGATGGTGATA +
Preference number: 2 (lower is better)
Translates to: PPCLAICCCCCCCCCCCFHQLFI*QMRMVI
Trigger: TATCACCATCCTCATTTGGCAAATGAAAAGCTGATG...AAAACAACAACAACAACAACAACAACAACAACAACAAATAGCCAGGCATGGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR-3UTR TCA 90 bp AGCATCAAGAGTTGTTTCTTAAGAAGTATAAAATTCTTGGCTACAGATGGCATGTTACCTGCAGGGTGGTaGAATATAGTAGTAACTTCA +
Preference number: 2 (lower is better)
Translates to: SIKSCFLRSIKFLATDGMLPAGW*NIVVTS
Trigger: TGAAGTTACTACTATATTTCACCACCCTGCAGGTAA...CATGCCATCTGTAGCCAAGAATTTTATACTTCTTAAGAAACAACTCTTGATGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 72 bp TCTTCCCATGGAGCCCAGACTGTCTGCTCGGCTGCGTaGACTATCAGAGGCCAGCCTGGAGGCACGGGGGCG +
Preference number: 3 (lower is better)
Translates to: SSHGAQTVCSAA*TIRGQPGGTGA
Trigger: CGCCCCCGTGCCTCCAGGCTGGCCTCTGATAGTCCACGCAGCCGAGCAGACAGTCTGGGCTCCATGGGAAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR GCA 72 bp AGCCTTGCCAGAGAGGGAGGCCGGCCCACCCAGGAATaGCCATCCAATCGGTCCAGACTGGGATTTGGAGCC +
Preference number: 3 (lower is better)
Translates to: SLAREGGRPTQE*PSNRSRLGFGA
Trigger: GGCTCCAAATCCCAGTCTGGACCGATTGGATGGGCATTCCTGGGTGGGCCGGCCTCCCTCTCTGGCAAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR CCA 72 bp AGTAGCTGTGGGAAGAGGCCCAGGAAGCATGGTGGCTaGGGGGTCTGGGCAGCACAGGATGGTGTCCACTAC +
Preference number: 3 (lower is better)
Translates to: SSCGKRPRKHGG*GVWAAQDGVHY
Trigger: GTAGTGGACACCATCCTGTGCTGCCCAGACCCCCCAGCCACCATGCTTCCTGGGCCTCTTCCCACAGCTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
3UTR CCA 72 bp GGAGCCCTGCATGGGGCCAAGCCCTATGCCAAGGACTaGAGGTCCAGTGAAGGAGAGACGGACAAGGTCGCT +
Preference number: 3 (lower is better)
Translates to: GALHGAKPYAKD*RSSEGETDKVA
Trigger: AGCGACCTTGTCCGTCTCTCCTTCACTGGACCTCCAGTCCTTGGCATAGGGCTTGGCCCCATGCAGGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR TCA 72 bp TGGGGCCAAGCCCTATGCCAAGGACTGGAGGTCCAGTaGAGGAGAGACGGACAAGGTCGCTGCTCCCAGGAA +
Preference number: 3 (lower is better)
Translates to: WGQALCQGLEVQ*RRDGQGRCSQE
Trigger: TTCCTGGGAGCAGCGACCTTGTCCGTCTCTCCTTCACTGGACCTCCAGTCCTTGGCATAGGGCTTGGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR GCA 72 bp GGACTATCAGAGGCCAGCCTGGAGGCACGGGGGCGGTaGCATCCATTCATGAGCACATATGCATGGAGCCCT +
Preference number: 3 (lower is better)
Translates to: GLSEASLEARGR*HPFMSTYAWSP
Trigger: AGGGCTCCATGCATATGTGCTCATGAATGGATGGCACCGCCCCCGTGCCTCCAGGCTGGCCTCTGATAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR CCA 72 bp CGGGGGCGGTGCCATCCATTCATGAGCACATATGCATaGAGCCCTGCATGGGGCCAAGCCCTATGCCAAGGA +
Preference number: 3 (lower is better)
Translates to: RGRCHPFMSTYA*SPAWGQALCQG
Trigger: TCCTTGGCATAGGGCTTGGCCCCATGCAGGGCTCCATGCATATGTGCTCATGAATGGATGGCACCGCCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR CCA 72 bp GGCCCACCCAGGAATGCCCATCCAATCGGTCCAGACTaGGATTTGGAGCCTGTCTGTGGCCTACTGGCTCAG +
Preference number: 3 (lower is better)
Translates to: GPPRNAHPIGPD*DLEPVCGLLAQ
Trigger: CTGAGCCAGTAGGCCACAGACAGGCTCCAAATCCCAGTCTGGACCGATTGGATGGGCATTCCTGGGTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR TCA 72 bp CACCCTGGAGGATGGCAGCTCTTCTCTCAGGGTTTCTaGGCTGGTGCCCCAGCTGTGCCTTCGACACAGTTG +
Preference number: 3 (lower is better)
Translates to: HPGGWQLFSQGF*AGAPAVPSTQL
Trigger: CAACTGTGTCGAAGGCACAGCTGGGGCACCAGCTCAGAAACCCTGAGAGAAGAGCTGCCATCCTCCAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CAA 90 bp CTCTCAGGGTTTCTGAGCTGGTGCCCCAGCTGTGCCTTCGACACAGTTGCAAGCGCTGGAGTGTCTGGCTaGCTGGTACTGCCAATGGAA +
Preference number: 3 (lower is better)
Translates to: LSGFLSWCPSCAFDTVASAGVSG*LVLPME
Trigger: TTCCATTGGCAGTACCAGCAAGCCAGACACTCCAGC...GCTTGCAACTGTGTCGAAGGCACAGCTGGGGCACCAGCTCAGAAACCCTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CAA 90 bp GGCCGGCCCACCCAGGAATGCCCATCCAATCGGTCCAGACTGGGATTTGGAGCCACTGGCTCAGTCACCTaGGGCAAGTCATTTAACTTC +
Preference number: 3 (lower is better)
Translates to: GRPTQECPSNRSRLGFGATGSVT*GKSFNF
Trigger: GAAGTTAAATGACTTGCCCAAGGTGACTGAGCCAGT...GGCTCCAAATCCCAGTCTGGACCGATTGGATGGGCATTCCTGGGTGGGCCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR GCA 72 bp ACTAGAAGGACTCCCCACTCTGCTGTCTTTCAAGGATaGCCCTGTGTGGGGCTGCAGTGCAGCCACGGTCTT +
Preference number: 3 (lower is better)
Translates to: TRRTPHSAVFQG*PCVGLQCSHGL
Trigger: AAGACCGTGGCTGCACTGCAGCCCCACACAGGGGCATCCTTGAAAGACAGCAGAGTGGGGAGTCCTTCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 72 bp GCCAGTTCCTCATTAGTAGCCTCAGCATGGGGGCTCTaGAGACCAACGCAGAAGGTCTTCCAGGGAGAGCTG +
Preference number: 3 (lower is better)
Translates to: ASSSLVASAWGL*RPTQKVFQGEL
Trigger: CAGCTCTCCCTGGAAGACCTTCTGCGTTGGTCTCCAGAGCCCCCATGCTGAGGCTACTAATGAGGAACTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 72 bp AGGCTTCGGGCCAGTTCCTCATTAGTAGCCTCAGCATaGGGGCTCTGGAGACCAACGCAGAAGGTCTTCCAG +
Preference number: 3 (lower is better)
Translates to: RLRASSSLVASA*GLWRPTQKVFQ
Trigger: CTGGAAGACCTTCTGCGTTGGTCTCCAGAGCCCCCATGCTGAGGCTACTAATGAGGAACTGGCCCGAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 72 bp AGGCATCTGTTCCCACCACAGATACCTCGGGTACTTTaGGCTCTGCCAGCTCATCTGTCCCACACCGCATGG +
Preference number: 3 (lower is better)
Translates to: RHLFPPQIPRVL*ALPAHLSHTAW
Trigger: CCATGCGGTGTGGGACAGATGAGCTGGCAGAGCCCAAAGTACCCGAGGTATCTGTGGTGGGAACAGATGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 72 bp TGGAGGATGGCAGCTCTTCTCTCAGGGTTTCTGAGCTaGTGCCCCAGCTGTGCCTTCGACACAGTTGCAAGC +
Preference number: 3 (lower is better)
Translates to: WRMAALLSGFLS*CPSCAFDTVAS
Trigger: GCTTGCAACTGTGTCGAAGGCACAGCTGGGGCACCAGCTCAGAAACCCTGAGAGAAGAGCTGCCATCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CAA 90 bp TGTCCCTGCCACATCCCAGACCATTGGCCCCTAAAAATCTCACTGCACCCTGCCAGTGTGTGGGCAAGATaGGGAGGGATGTCTGCAAGC +
Preference number: 3 (lower is better)
Translates to: CPCHIPDHWPLKISLHPASVWAR*GGMSAS
Trigger: GCTTGCAGACATCCCTCCCAATCTTGCCCACACACT...GGCAGGGTGCAGTGAGATTTTTAGGGGCCAATGGTCTGGGATGTGGCAGGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 72 bp CTGAGGGTGGGAGATGTGGGGTCTAGGCTGACTCCTTaGGTTCCTAGCTGGAGTGTCTGGCTTGCTGGTACT +
Preference number: 3 (lower is better)
Translates to: LRVGDVGSRLTP*VPSWSVWLAGT
Trigger: AGTACCAGCAAGCCAGACACTCCAGCTAGGAACTCAAGGAGTCAGCCTAGACCCCACATCTCCCACCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 72 bp AATCCCCACGTGTTGAGGGAGGGACATGGTGGGAAGTaGTTGGATCACGGAGCCGGTTTCCCCCATGCTGTT +
Preference number: 3 (lower is better)
Translates to: NPHVLREGHGGK*LDHGAGFPHAV
Trigger: AACAGCATGGGGGAAACCGGCTCCGTGATCCAATCACTTCCCACCATGTCCCTCCCTCAACACGTGGGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR GCA 72 bp TCTTCTCTCAGGGTTTCTGAGCTGGTGCCCCAGCTGTaGCTTCGACACAGTTGCAAGCTGGCAGCTTCAGGA +
Preference number: 3 (lower is better)
Translates to: SSLRVSELVPQL*LRHSCKLAASG
Trigger: TCCTGAAGCTGCCAGCTTGCAACTGTGTCGAAGGCACAGCTGGGGCACCAGCTCAGAAACCCTGAGAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR GCA 72 bp TTGAGGAAAATTCCCAGGGGGCTGACAGCTGAAGGCTaGTGGCTGAGAGCACTCCCAGTAGCTGTGGGAAGA +
Preference number: 3 (lower is better)
Translates to: LRKIPRGLTAEG*WLRALPVAVGR
Trigger: TCTTCCCACAGCTACTGGGAGTGCTCTCAGCCAGCAGCCTTCAGCTGTCAGCCCCCTGGGAATTTTCCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
3UTR CCA 72 bp CTCAGCCAGTCTCATGGGAGGGTCTTGAAGCTGAGATaGCCCTTCCAAGTTGTCAAGTTGAGGCAGTGGGGC +
Preference number: 3 (lower is better)
Translates to: LSQSHGRVLKLR*PFQVVKLRQWG
Trigger: GCCCCACTGCCTCAACTTGACAACTTGGAAGGGCCATCTCAGCTTCAAGACCCTCCCATGAGACTGGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
3UTR CCA 72 bp CATCCATTCATGAGCACATATGCATGGAGCCCTGCATaGGGCCAAGCCCTATGCCAAGGACTGGAGGTCCAG +
Preference number: 3 (lower is better)
Translates to: HPFMSTYAWSPA*GQALCQGLEVQ
Trigger: CTGGACCTCCAGTCCTTGGCATAGGGCTTGGCCCCATGCAGGGCTCCATGCATATGTGCTCATGAATGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR CCA 72 bp CCAGGAATGCCCATCCAATCGGTCCAGACTGGGATTTaGAGCCTGTCTGTGGCCTACTGGCTCAGTCACCTT +
Preference number: 3 (lower is better)
Translates to: PGMPIQSVQTGI*SLSVAYWLSHL
Trigger: AAGGTGACTGAGCCAGTAGGCCACAGACAGGCTCCAAATCCCAGTCTGGACCGATTGGATGGGCATTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR TCA 72 bp TCTTCCATTGAGGAAAATTCCCAGGGGGCTGACAGCTaGAGGCTGCTGGCTGAGAGCACTCCCAGTAGCTGT +
Preference number: 3 (lower is better)
Translates to: SSIEENSQGADS*RLLAESTPSSC
Trigger: ACAGCTACTGGGAGTGCTCTCAGCCAGCAGCCTTCAGCTGTCAGCCCCCTGGGAATTTTCCTCAATGGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
3UTR GCA 72 bp CAGGCCTGTCTCCTAGGGCTCTCCGAATCCTCTGTCTaGAAAGGAACGGCACCATGGGAAAATCTAGCACAG +
Preference number: 3 (lower is better)
Translates to: QACLLGLSESSV*KGTAPWENLAQ
Trigger: CTGTGCTAGATTTTCCCATGGTGCCGTTCCTTTGCAGACAGAGGATTCGGAGAGCCCTAGGAGACAGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000648983.1
3UTR CCA 72 bp TGGTGCCCCAGCTGTGCCTTCGACACAGTTGCAAGCTaGCAGCTTCAGGATAGCGCAGTAGATGAAAGGACA +
Preference number: 3 (lower is better)
Translates to: WCPSCAFDTVAS*QLQDSAVDERT
Trigger: TGTCCTTTCATCTACTGCGCTATCCTGAAGCTGCCAGCTTGCAACTGTGTCGAAGGCACAGCTGGGGCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CAA 90 bp CGTTCTGTTAGGCAGCACCAGCGCACTGCAGCTAATGAAGCACATTCCTGCAGGAACTCAAAAGCGTCTTaGAACGGCAGAGACAGGCCC +
Preference number: 3 (lower is better)
Translates to: RSVRQHQRTAANEAHSCRNSKAS*NGRDRP
Trigger: GGGCCTGTCTCTGCCGTTCAAAGACGCTTTTGAGTT...CCTGCAGGAATGTGCTTCATTAGCTGCAGTGCGCTGGTGCTGCCTAACAGAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000648983.1
3UTR-3UTR CAA 90 bp CTCTCAGGGTTTCTGAGCTGGTGCCCCAGCTGTGCCTTCGACACAGTTGCAAGCTATCTAGGTTCAGAGTaGGTCTCTGTTACTGGCAGG +
Preference number: 3 (lower is better)
Translates to: LSGFLSWCPSCAFDTVASYLGSE*VSVTGR
Trigger: CCTGCCAGTAACAGAGACCAACTCTGAACCTAGATA...GCTTGCAACTGTGTCGAAGGCACAGCTGGGGCACCAGCTCAGAAACCCTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR GCA 72 bp GCAAAGGTAGTGGATGACATAGATGTCTGGGCCACCTaGTCACGTAACTATCTTCTGCCCTCTGGCCCTGCT +
Preference number: 3 (lower is better)
Translates to: AKVVDDIDVWAT*SRNYLLPSGPA
Trigger: AGCAGGGCCAGAGGGCAGAAGATAGTTACGTGAGCAGGTGGCCCAGACATCTATGTCATCCACTACCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR GCA 72 bp AAGGACAAGTGGACCCTGTCACCATGTGCCCACTGCTaGACCTCCTTTGCTGTGGAATCATATGGGATCCTG +
Preference number: 3 (lower is better)
Translates to: KDKWTLSPCAHC*TSFAVESYGIL
Trigger: CAGGATCCCATATGATTCCACAGCAAAGGAGGTGCAGCAGTGGGCACATGGTGACAGGGTCCACTTGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 72 bp TCCAATCGGTCCAGACTGGGATTTGGAGCCTGTCTGTaGCCTACTGGCTCAGTCACCTTGGGCAAGTCATTT +
Preference number: 3 (lower is better)
Translates to: SNRSRLGFGACL*PTGSVTLGKSF
Trigger: AAATGACTTGCCCAAGGTGACTGAGCCAGTAGGCCACAGACAGGCTCCAAATCCCAGTCTGGACCGATTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR-3UTR CAA 90 bp ATAGCAACCGTATGGCGCTTCCTAGTGACAGCCAGTGTGCGTTCTGTTAGGCAGAACTCAAAAGCGTCTTaGAACGGCAGAGACAGGCCC +
Preference number: 3 (lower is better)
Translates to: IATVWRFLVTASVRSVRQNSKAS*NGRDRP
Trigger: GGGCCTGTCTCTGCCGTTCAAAGACGCTTTTGAGTT...CTGCCTAACAGAACGCACACTGGCTGTCACTAGGAAGCGCCATACGGTTGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000648983.1
3UTR TCA 72 bp CCTGGGATAGAGCAAAGAGAACAGACAGGGGAGTTCTaGGAGGCACCAGAGCTATCTAAACTCAGGGGGATG +
Preference number: 3 (lower is better)
Translates to: PGIEQREQTGEF*EAPELSKLRGM
Trigger: CATCCCCCTGAGTTTAGATAGCTCTGGTGCCTCTCAGAACTCCCCTGTCTGTTCTCTTTGCTCTATCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 72 bp AAGGTCTTCCAGGGAGAGCTGAAACGTTCAGATAAGTaGGCTCTGGGAAGAAGGGGTAGTTGGCTGGCTCTC +
Preference number: 3 (lower is better)
Translates to: KVFQGELKRSDK*ALGRRGSWLAL
Trigger: GAGAGCCAGCCAACTACCCCTTCTTCCCAGAGCTCACTTATCTGAACGTTTCAGCTCTCCCTGGAAGACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 72 bp ACCTTCCTGAGTAGTACCCTTAGGCATGAATTGGACTaGCCCAGCAGAAGTTTGGCCCAGGATTGTGGCCGA +
Preference number: 3 (lower is better)
Translates to: TFLSSTLRHELD*PSRSLAQDCGR
Trigger: TCGGCCACAATCCTGGGCCAAACTTCTGCTGGGTCAGTCCAATTCATGCCTAAGGGTACTACTCAGGAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR GCA 72 bp AGCCCTGAGGGGGCTGAGCCTGAAGTCAGCATATCCTaGTCAGGTCACGGTCTGGGCACTTGTATAATTATT +
Preference number: 3 (lower is better)
Translates to: SPEGAEPEVSIS*SGHGLGTCIII
Trigger: AATAATTATACAAGTGCCCAGACCGTGACCTGAGCAGGATATGCTGACTTCAGGCTCAGCCCCCTCAGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
3UTR CCA 72 bp GTAGCTCCGAGTTACTTCTCAGTGTGTGGGCAAGATTaGGAGGGATGTCTGCAAGCTTCCTTCCCTTCAGCA +
Preference number: 3 (lower is better)
Translates to: VAPSYFSVCGQD*EGCLQASFPSA
Trigger: TGCTGAAGGGAAGGAAGCTTGCAGACATCCCTCCCAATCTTGCCCACACACTGAGAAGTAACTCGGAGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CAA 90 bp CTGCTGAGCCCTTTCCTGCTCTGGGCCCCAATCAAAACACAACTTTCTGTGTCACCACATCCCAGACCATaGGCCCCTAAAAATCTCACT +
Preference number: 3 (lower is better)
Translates to: LLSPFLLWAPIKTQLSVSPHPRP*APKNLT
Trigger: AGTGAGATTTTTAGGGGCCAATGGTCTGGGATGTGG...TGACACAGAAAGTTGTGTTTTGATTGGGGCCCAGAGCAGGAAAGGGCTCAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CAA 90 bp TCACATCTTCATCTTCATCATCATCAAGTGTTTAGGCCTCACCCGGGAGCAACGGACTGGCCACTCCAGTaGACCTTCCTGAGTAGTACC +
Preference number: 3 (lower is better)
Translates to: SHLHLHHHQVFRPHPGATDWPLQ*TFLSST
Trigger: GGTACTACTCAGGAAGGTCAACTGGAGTGGCCAGTC...CGTTGCTCCCGGGTGAGGCCTAAACACTTGATGATGATGAAGATGAAGATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR TCA 72 bp TCAGGGGGATGGAACCGAGTGAGCGGCAGCGGTAATTaGGTTTCAGTTACCTGCAGGGTGGTGAAATATAGT +
Preference number: 3 (lower is better)
Translates to: SGGWNRVSGSGN*VSVTCRVVKYS
Trigger: ACTATATTTCACCACCCTGCAGGTAACTGAAACTCAATTACCGCTGCCGCTCACTCGGTTCCATCCCCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR GCA 72 bp GGCTCCTTCTCTTTCCACATACAGTGGATGGCTAGGTaGATGATGCACAACCTATGCCCACTAGAAGGACTC +
Preference number: 3 (lower is better)
Translates to: GSFSFHIQWMAR*MMHNLCPLEGL
Trigger: GAGTCCTTCTAGTGGGCATAGGTTGTGCATCATGCACCTAGCCATCCACTGTATGTGGAAAGAGAAGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 72 bp ATCACCCTTTCACCATGTTGGGTGATAGCAACCGTATaGCGCTTCCTAGTGACAGCCAGTGTGCGTTCTGTT +
Preference number: 3 (lower is better)
Translates to: ITLSPCWVIATV*RFLVTASVRSV
Trigger: AACAGAACGCACACTGGCTGTCACTAGGAAGCGCCATACGGTTGCTATCACCCAACATGGTGAAAGGGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000648983.1
3UTR CCA 72 bp GGAGACCTAGCTTGTCCCAGGCTCTGTTCCAGATGCTaGAGATATAACAGGGAACAGAACAGAGACTCTGCT +
Preference number: 3 (lower is better)
Translates to: GDLACPRLCSRC*RYNREQNRDSA
Trigger: AGCAGAGTCTCTGTTCTGTTCCCTGTTATATCTCCAGCATCTGGAACAGAGCCTGGGACAAGCTAGGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 72 bp GGTACTGGTGCAAAGGTAGTGGATGACATAGATGTCTaGGCCACCTGCTCACGTAACTATCTTCTGCCCTCT +
Preference number: 3 (lower is better)
Translates to: GTGAKVVDDIDV*ATCSRNYLLPS
Trigger: AGAGGGCAGAAGATAGTTACGTGAGCAGGTGGCCCAGACATCTATGTCATCCACTACCTTTGCACCAGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 72 bp CCATGGTTGCTGTTTATACACCCATTGTGTCAGCTCTaGGGTGGCCTCAGAGACTGGTTGATGTCAACTGTG +
Preference number: 3 (lower is better)
Translates to: PWLLFIHPLCQL*GGLRDWLMSTV
Trigger: CACAGTTGACATCAACCAGTCTCTGAGGCCACCCCAGAGCTGACACAATGGGTGTATAAACAGCAACCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 72 bp CCAGTTCCTGCTTCAAATCAGTCTAACGCCTTCACCTaGTGCTCAAGACCCTTCAAACCTGATCCTGGTCCT +
Preference number: 3 (lower is better)
Translates to: PVPASNQSNAFT*CSRPFKPDPGP
Trigger: AGGACCAGGATCAGGTTTGAAGGGTCTTGAGCATCAGGTGAAGGCGTTAGACTGATTTGAAGCAGGAACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR GCA 72 bp CCTCACCAGACTCAGAGGAAATTATCTCTCCTTTATTaGTGTGTCCCCAGTGCCAGTCTAGTCCTTGGCACA +
Preference number: 3 (lower is better)
Translates to: PHQTQRKLSLLY*CVPSASLVLGT
Trigger: TGTGCCAAGGACTAGACTGGCACTGGGGACACAGCAATAAAGGAGAGATAATTTCCTCTGAGTCTGGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR GCA 72 bp TCTCTCTCTCCCCTGCTGTCTTGTGAAGAAGATGCCTaGTTCCCCTTGCCTTCTGCCATGATTGTAAGTTTC +
Preference number: 3 (lower is better)
Translates to: SLSPLLSCEEDA*FPLPSAMIVSF
Trigger: GAAACTTACAATCATGGCAGAAGGCAAGGGGAAGCAGGCATCTTCTTCACAAGACAGCAGGGGAGAGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 72 bp AGTCTAAGCTCAGGCTCCTTCTCTTTCCACATACAGTaGATGGCTAGGTGCATGATGCACAACCTATGCCCA +
Preference number: 3 (lower is better)
Translates to: SLSSGSFSFHIQ*MARCMMHNLCP
Trigger: TGGGCATAGGTTGTGCATCATGCACCTAGCCATCCACTGTATGTGGAAAGAGAAGGAGCCTGAGCTTAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 72 bp GGAGCTATATCTAGGTTCAGAGTTGGTCTCTGTTACTaGCAGGCCGAACACTCAGCAGCAGCAATAGCTAGA +
Preference number: 3 (lower is better)
Translates to: GAISRFRVGLCY*QAEHSAAAIAR
Trigger: TCTAGCTATTGCTGCTGCTGAGTGTTCGGCCTGCCAGTAACAGAGACCAACTCTGAACCTAGATATAGCTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 72 bp TACTATCTGCCTTGCAGGGTTGTCGTGAGGGTTACATaGGAGAGCTGTGTGATGGCTACCATCATCACATCT +
Preference number: 3 (lower is better)
Translates to: YYLPCRVVVRVT*ESCVMATIITS
Trigger: AGATGTGATGATGGTAGCCATCACACAGCTCTCCCATGTAACCCTCACGACAACCCTGCAAGGCAGATAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR-3UTR CAA 90 bp CTCCACGTGAATCAACTGAGTACCAAAGATATACCTCCCTTCCCTCCATTGCTTTTATGGAGACCTAGCTaGTCCCAGGCTCTGTTCCAG +
Preference number: 3 (lower is better)
Translates to: LHVNQLSTKDIPPFPPLLLWRPS*SQALFQ
Trigger: CTGGAACAGAGCCTGGGACAAGCTAGGTCTCCATAA...AAGCAATGGAGGGAAGGGAGGTATATCTTTGGTACTCAGTTGATTCACGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CAA 90 bp CCAGTAAAAAGCTTTCTGCCCGGTGTGGGAAGGTTGGACTTAGGAGTTGGACAGCTTTACCTTATCCACTaGCCTGGGATGGTACTTATG +
Preference number: 3 (lower is better)
Translates to: PVKSFLPGVGRLDLGVGQLYLIH*PGMVLM
Trigger: CATAAGTACCATCCCAGGCAAGTGGATAAGGTAAAG...CTGTCCAACTCCTAAGTCCAACCTTCCCACACCGGGCAGAAAGCTTTTTACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR TCA 72 bp GGATATTATAAAGAGCTCCCCAGGCAGCCAAAGGTGTaGAATGAGGAACAGGCAGGTACTGGTGCAAAGGTA +
Preference number: 3 (lower is better)
Translates to: GYYKELPRQPKV*NEEQAGTGAKV
Trigger: TACCTTTGCACCAGTACCTGCCTGTTCCTCATTTCACACCTTTGGCTGCCTGGGGAGCTCTTTATAATATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 72 bp ATTGCTCAGAGAGATAAATTGGGCTCCGATGCTGTATaGAGACCTCAGCCAGTCTCATGGGAGGGTCTTGAA +
Preference number: 3 (lower is better)
Translates to: IAQRDKLGSDAV*RPQPVSWEGLE
Trigger: TTCAAGACCCTCCCATGAGACTGGCTGAGGTCTTCATACAGCATCGGAGCCCAATTTATCTCTCTGAGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
3UTR GCA 72 bp CTGGGTTTTTCCATACTCTGCTTGCTCTGCCAGGCATaGATCTCAACCACCCAATTAATTACTCCTGCCCTT +
Preference number: 3 (lower is better)
Translates to: LGFSILCLLCQA*ISTTQLITPAL
Trigger: AAGGGCAGGAGTAATTAATTGGGTGGTTGAGATGCATGCCTGGCAGAGCAAGCAGAGTATGGAAAAACCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR GCA 72 bp TTCCAGATATCTCCACTTCTGGGTTTTTCCATACTCTaGTTGCTCTGCCAGGCATGCATCTCAACCACCCAA +
Preference number: 3 (lower is better)
Translates to: FQISPLLGFSIL*LLCQACISTTQ
Trigger: TTGGGTGGTTGAGATGCATGCCTGGCAGAGCAAGCAGAGTATGGAAAAACCCAGAAGTGGAGATATCTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR GCA 72 bp GCAGCACAGGATGGTGTCCACTACAGCCCACATTTGTaGTGCTCAGCTCTACTTTTTGGTTTAAGTTCTGGT +
Preference number: 3 (lower is better)
Translates to: AAQDGVHYSPHL*CSALLFGLSSG
Trigger: ACCAGAACTTAAACCAAAAAGTAGAGCTGAGCAGCACAAATGTGGGCTGTAGTGGACACCATCCTGTGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
3UTR GCA 72 bp CTATTCCAAGCAAAAGCAACTCAAACTAATAAAAGCTaGGCCTCCGCTCTGGGTTCCACACCATCTGTCGGT +
Preference number: 3 (lower is better)
Translates to: LFQAKATQTNKS*ASALGSTPSVG
Trigger: ACCGACAGATGGTGTGGAACCCAGAGCGGAGGCGCAGCTTTTATTAGTTTGAGTTGCTTTTGCTTGGAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR CCA 72 bp TTAACAGACTGTAGCTCCGAGTTACTTCTCAGTGTGTaGGCAAGATTGGGAGGGATGTCTGCAAGCTTCCTT +
Preference number: 3 (lower is better)
Translates to: LTDCSSELLLSV*ARLGGMSASFL
Trigger: AAGGAAGCTTGCAGACATCCCTCCCAATCTTGCCCACACACTGAGAAGTAACTCGGAGCTACAGTCTGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 72 bp TTCAAGCGATTCTCATACCTCAGCCTTCCAAGTAGCTaGGATTACAGGCGCCTGCCATCATATCTGGCTAAT +
Preference number: 3 (lower is better)
Translates to: FKRFSYLSLPSS*DYRRLPSYLAN
Trigger: ATTAGCCAGATATGATGGCAGGCGCCTGTAATCCCAGCTACTTGGAAGGCTGAGGTATGAGAATCGCTTGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 72 bp CCCTTAGGCATGAATTGGACTGACCCAGCAGAAGTTTaGCCCAGGATTGTGGCCGAGAAACAAAATCTGAAT +
Preference number: 3 (lower is better)
Translates to: PLGMNWTDPAEV*PRIVAEKQNLN
Trigger: ATTCAGATTTTGTTTCTCGGCCACAATCCTGGGCCAAACTTCTGCTGGGTCAGTCCAATTCATGCCTAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR-3UTR CAA 90 bp GTCATGATAGTGAGTGACTTCTCAAGAGATCCGATGGTTTCAAAGTGTTTGGCACTTGAGGTAGGAGGCTaGCTTGAACCTGGGAGGTCA +
Preference number: 3 (lower is better)
Translates to: VMIVSDFSRDPMVSKCLALEVGG*LEPGRS
Trigger: TGACCTCCCAGGTTCAAGCAAGCCTCCTACCTCAAG...TGCCAAACACTTTGAAACCATCGGATCTCTTGAGAAGTCACTCACTATCATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CAA 90 bp CTGCTGAGCCCTTTCCTGCTCTGGGCCCCAATCAAAACACAACTTTCTGTGTCAACTAGCAGTAGGAAATaGAAGGTGATGTTTCTGTTC +
Preference number: 3 (lower is better)
Translates to: LLSPFLLWAPIKTQLSVSTSSRK*KVMFLF
Trigger: GAACAGAAACATCACCTTCAATTTCCTACTGCTAGT...TGACACAGAAAGTTGTGTTTTGATTGGGGCCCAGAGCAGGAAAGGGCTCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 72 bp TCTGAGATGTCTATGGGGCATCTAGGAAATATCATCTaGAAGTCAGGGGACAGGTCTGGGCTGACGATACAA +
Preference number: 3 (lower is better)
Translates to: SEMSMGHLGNII*KSGDRSGLTIQ
Trigger: TTGTATCGTCAGCCCAGACCTGTCCCCTGACTTTCAGATGATATTTCCTAGATGCCCCATAGACATCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 72 bp CATTGTGTCAGCTCTGGGGTGGCCTCAGAGACTGGTTaGTGTCAACTGTGTGTACATTGTTGTTTAGTGCTT +
Preference number: 3 (lower is better)
Translates to: HCVSSGVASETG*CQLCVHCCLVL
Trigger: AAGCACTAAACAACAATGTACACACAGTTGACATCAACCAGTCTCTGAGGCCACCCCAGAGCTGACACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR GCA 72 bp GGAAAGAGAGACCTAAAGCAAGTGAGGACAAGAACATaGAGATGTCTGGGGAAAGAGCATTGCAACTGGAAC +
Preference number: 3 (lower is better)
Translates to: GKRDLKQVRTRT*RCLGKEHCNWN
Trigger: GTTCCAGTTGCAATGCTCTTTCCCCAGACATCTGCATGTTCTTGTCCTCACTTGCTTTAGGTCTCTCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 72 bp GAATTGCTGCTGGCTTTGCCTGACCTTATGACTTGGTaGATATGGCAGAATCCAGCTCATGATGAACAGCTT +
Preference number: 3 (lower is better)
Translates to: ELLLALPDLMTW*IWQNPAHDEQL
Trigger: AAGCTGTTCATCATGAGCTGGATTCTGCCATATCCACCAAGTCATAAGGTCAGGCAAAGCCAGCAGCAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 72 bp TTCTCCATGGTATGTGCTCTCTGGTGGGTGTTTACATaGAATACAATGATCTTCACACTTGGTGCCCACTCC +
Preference number: 3 (lower is better)
Translates to: FSMVCALWWVFT*NTMIFTLGAHS
Trigger: GGAGTGGGCACCAAGTGTGAAGATCATTGTATTCCATGTAAACACCCACCAGAGAGCACATACCATGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CAA 90 bp GTCATGATAGTGAGTGACTTCTCAAGAGATCCGATGGTTTCAAAGTGTTTGGCAGAATTGCTGCTGGCTTaGCCTGACCTTATGACTTGG +
Preference number: 3 (lower is better)
Translates to: VMIVSDFSRDPMVSKCLAELLLA*PDLMTW
Trigger: CCAAGTCATAAGGTCAGGCAAAGCCAGCAGCAATTC...TGCCAAACACTTTGAAACCATCGGATCTCTTGAGAAGTCACTCACTATCATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 72 bp AGCCGGTTTCCCCCATGCTGTTGTCATGATAGTGAGTaGCTTCTCAAGAGATCCGATGGTTTCAAAGTGTTT +
Preference number: 3 (lower is better)
Translates to: SRFPPCCCHDSE*LLKRSDGFKVF
Trigger: AAACACTTTGAAACCATCGGATCTCTTGAGAAGTCACTCACTATCATGACAACAGCATGGGGGAAACCGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 72 bp ACACAAATCTTAACTCGAATTATAATCCCCACGTGTTaGGGGAGGGACATGGTGGGAAGTGATTGGATCACG +
Preference number: 3 (lower is better)
Translates to: TQILTRIIIPTC*GRDMVGSDWIT
Trigger: CGTGATCCAATCACTTCCCACCATGTCCCTCCCTCAACACGTGGGGATTATAATTCGAGTTAAGATTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR GCA 72 bp TCTCCACTTCTGGGTTTTTCCATACTCTGCTTGCTCTaGCAGGCATGCATCTCAACCACCCAATTAATTACT +
Preference number: 3 (lower is better)
Translates to: SPLLGFSILCLL*QACISTTQLIT
Trigger: AGTAATTAATTGGGTGGTTGAGATGCATGCCTGGCAGAGCAAGCAGAGTATGGAAAAACCCAGAAGTGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 72 bp ATATTCACAGTGAAATCCATCACCCTTTCACCATGTTaGGTGATAGCAACCGTATGGCGCTTCCTAGTGACA +
Preference number: 3 (lower is better)
Translates to: IFTVKSITLSPC*VIATVWRFLVT
Trigger: TGTCACTAGGAAGCGCCATACGGTTGCTATCACCCAACATGGTGAAAGGGTGATGGATTTCACTGTGAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000648983.1
3UTR CCA 72 bp ACTGAGCCCTCTGCTAAGAACTCCTACCTATCCTTCTaGCTTTGGTTCAAACATGAACTCCTCTGTGAAGAT +
Preference number: 3 (lower is better)
Translates to: TEPSAKNSYLSF*LWFKHELLCED
Trigger: ATCTTCACAGAGGAGTTCATGTTTGAACCAAAGCCAGAAGGATAGGTAGGAGTTCTTAGCAGAGGGCTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 72 bp TTTGTGCTGCTCAGCTCTACTTTTTGGTTTAAGTTCTaGTGGACCTCCTTTCCTGGGGGAAACTTAGGAAAG +
Preference number: 3 (lower is better)
Translates to: FVLLSSTFWFKF*WTSFPGGNLGK
Trigger: CTTTCCTAAGTTTCCCCCAGGAAAGGAGGTCCACCAGAACTTAAACCAAAAAGTAGAGCTGAGCAGCACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
3UTR-3UTR CAA 90 bp GTCATGATAGTGAGTGACTTCTCAAGAGATCCGATGGTTTCAAAGTGTTTGGCATCTGGGGAAAGAGCATaGCAACTGGAACAGCAAATG +
Preference number: 3 (lower is better)
Translates to: VMIVSDFSRDPMVSKCLASGERA*QLEQQM
Trigger: CATTTGCTGTTCCAGTTGCAATGCTCTTTCCCCAGA...TGCCAAACACTTTGAAACCATCGGATCTCTTGAGAAGTCACTCACTATCATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 72 bp GAAATATCATCTGAAAGTCAGGGGACAGGTCTGGGCTaGCGATACAAACTGGAATGTCATCAGCATGTAAAT +
Preference number: 3 (lower is better)
Translates to: EISSESQGTGLG*RYKLECHQHVN
Trigger: ATTTACATGCTGATGACATTCCAGTTTGTATCGTCAGCCCAGACCTGTCCCCTGACTTTCAGATGATATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 72 bp ATTATTTCTATCTTAGGAATTGCTGCTGGCTTTGCCTaGCCTTATGACTTGGTGGATATGGCAGAATCCAGC +
Preference number: 3 (lower is better)
Translates to: IISILGIAAGFA*PYDLVDMAESS
Trigger: GCTGGATTCTGCCATATCCACCAAGTCATAAGGTCAGGCAAAGCCAGCAGCAATTCCTAAGATAGAAATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR TCA 72 bp GAAATTTCATTATGTATCTTCTACAGAGCCCTAAACTaGGAGCGCCAGCGTATTCAAATAAACCCTGAGGTG +
Preference number: 3 (lower is better)
Translates to: EISLCIFYRALN*ERQRIQINPEV
Trigger: CACCTCAGGGTTTATTTGAATACGCTGGCGCTCTCAGTTTAGGGCTCTGTAGAAGATACATAATGAAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR-3UTR CAA 90 bp GCCACCATGCCTGGCTATTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTATGAGTTTCCCTGACTaGATCTTTGACTTGGCTCTT +
Preference number: 3 (lower is better)
Translates to: ATMPGYLLLLLLLLLLLFMSFPD*IFDLAL
Trigger: AAGAGCCAAGTCAAAGATCAAGTCAGGGAAACTCAT...AAACAACAACAACAACAACAACAACAACAACAACAAATAGCCAGGCATGGTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR TCA 72 bp ATCTTCTTGGATCTTGAAACCAACCTCCCCAGGTTATaGGTAAGTCCATCCCTGACAGTAATTGTATCATTT +
Preference number: 3 (lower is better)
Translates to: IFLDLETNLPRL*VSPSLTVIVSF
Trigger: AAATGATACAATTACTGTCAGGGATGGACTTACTCATAACCTGGGGAGGTTGGTTTCAAGATCCAAGAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR GCA 72 bp TGTGTACATTGTTGTTTAGTGCTTCTCCATGGTATGTaGTCTCTGGTGGGTGTTTACATGGAATACAATGAT +
Preference number: 3 (lower is better)
Translates to: CVHCCLVLLHGM*SLVGVYMEYND
Trigger: ATCATTGTATTCCATGTAAACACCCACCAGAGAGCACATACCATGGAGAAGCACTAAACAACAATGTACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR GCA 72 bp AGGCATTGTGCTTCCTTCTTAATGGTTGGAGTGAGATaGAATAATTGTCTTTTACTTTCAAGAGAATGTCCC +
Preference number: 3 (lower is better)
Translates to: RHCASFLMVGVR*NNCLLLSRECP
Trigger: GGGACATTCTCTTGAAAGTAAAAGACAATTATTGCATCTCACTCCAACCATTAAGAAGGAAGCACAATGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 72 bp CTTTCAGCCAGAGAGCAATTTGTTTTCAACTTACTCTaGGTTCCTAAGTTAGCAGAACTCTTTGGTTCTTTA +
Preference number: 3 (lower is better)
Translates to: LSAREQFVFNLL*VPKLAELFGSL
Trigger: TAAAGAACCAAAGAGTTCTGCTAACTTAGGAACCCAGAGTAAGTTGAAAACAAATTGCTCTCTGGCTGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CCA 72 bp AATGTAACTAACACAGCTTTACCTTATCCACTTGCCTaGGATGGTACTTATGCTAATCCTATTCCAAGCAAA +
Preference number: 3 (lower is better)
Translates to: NVTNTALPYPLA*DGTYANPIPSK
Trigger: TTTGCTTGGAATAGGATTAGCATAAGTACCATCCCAGGCAAGTGGATAAGGTAAAGCTGTGTTAGTTACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR TCA 72 bp AGATTATGTCTTCTCTATCCCTGTGACCCTAATACCTaGCACGTAAGAACTCAACAAATATGTATTGAAAGA +
Preference number: 3 (lower is better)
Translates to: RLCLLYPCDPNT*HVRTQQICIER
Trigger: TCTTTCAATACATATTTGTTGAGTTCTTACGTGTCAGGTATTAGGGTCACAGGGATAGAGAAGACATAATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp GGCCGGCCCACCCAGGAATGCCCATCCAATCGGTCCAGACTGGGATTTGGAGCCCGGCCCTCGCGCCTCTaGGCCACAGCGAACCACATT +
Preference number: 4 (lower is better)
Translates to: GRPTQECPSNRSRLGFGARPSRL*ATANHI
Trigger: AATGTGGTTCGCTGTGGCCCAGAGGCGCGAGGGCCG...GGCTCCAAATCCCAGTCTGGACCGATTGGATGGGCATTCCTGGGTGGGCCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CCA 90 bp CCCTGCATGGGGCCAAGCCCTATGCCAAGGACTGGAGGTCCAGTGAAGGAGAGATATCAGAGGCCAGCCTaGAGGCACGGGGGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: PCMGPSPMPRTGGPVKERYQRPA*RHGGGA
Trigger: GGCACCGCCCCCGTGCCTCCAGGCTGGCCTCTGATA...TCTCTCCTTCACTGGACCTCCAGTCCTTGGCATAGGGCTTGGCCCCATGCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR TCA 90 bp CTCTCAGGGTTTCTGAGCTGGTGCCCCAGCTGTGCCTTCGACACAGTTGCAAGCCCCTGGGCGACAGAGTaGGACCCTGACCCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: LSGFLSWCPSCAFDTVASPWATE*DPDPLP
Trigger: TGGGAGGGGGTCAGGGTCTCACTCTGTCGCCCAGGG...GCTTGCAACTGTGTCGAAGGCACAGCTGGGGCACCAGCTCAGAAACCCTGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CTGCGCCTCCGCTCTGGGTTCCACACCATCTGTCGGTCCACACGCTTGGGATTAGGCACTGGGGGAGCATaGCAGCCTTGCCAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LRLRSGFHTICRSTRLGLGTGGA*QPCQRG
Trigger: CCCTCTCTGGCAAGGCTGTCATGCTCCCCCAGTGCC...TAATCCCAAGCGTGTGGACCGACAGATGGTGTGGAACCCAGAGCGGAGGCGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR GCA 90 bp AGCTGCGCCTCCGCTCTGGGTTCCACACCATCTGTCGGTCCACACGCTTGGGATGGGTCTGTACAAACGTaGCGACTGGCAGCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: SCASALGSTPSVGPHAWDGSVQT*RLAASR
Trigger: GCGGCTCGCTGCCAGTCGGCACGTTTGTACAGACCC...ATCCCAAGCGTGTGGACCGACAGATGGTGTGGAACCCAGAGCGGAGGCGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR GCA 90 bp CTGAGAGCACTCCCAGTAGCTGTGGGAAGAGGCCCAGGAAGCATGGTGGCTGGGGCCATCTCAGCTCACTaGAACCTCCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: LRALPVAVGRGPGSMVAGAISAH*NLRLPG
Trigger: ACCCGGGAGGCGGAGGTTGCAGTGAGCTGAGATGGC...CCCAGCCACCATGCTTCCTGGGCCTCTTCCCACAGCTACTGGGAGTGCTCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp AAGCTGCGCCTCCGCTCTGGGTTCCACACCATCTGTCGGTCCACACGCTTGGGAGAGGCACGGGGGCGGTaGCATCCATTCATGAGCACA +
Preference number: 4 (lower is better)
Translates to: KLRLRSGFHTICRSTRLGEARGR*HPFMST
Trigger: TGTGCTCATGAATGGATGGCACCGCCCCCGTGCCTC...TCCCAAGCGTGTGGACCGACAGATGGTGTGGAACCCAGAGCGGAGGCGCAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CCA 90 bp AGCTGCGCCTCCGCTCTGGGTTCCACACCATCTGTCGGTCCACACGCTTGGGATGTCTGCTCGGCTGCGTaGACTATCAGAGGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SCASALGSTPSVGPHAWDVCSAA*TIRGQP
Trigger: AGGCTGGCCTCTGATAGTCCACGCAGCCGAGCAGAC...ATCCCAAGCGTGTGGACCGACAGATGGTGTGGAACCCAGAGCGGAGGCGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR TCA 90 bp GTTGAGGCAGTGGGGCCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGCAGGGGGCTGACAGCTaGAGGCTGCTGGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: VEAVGPGLHNLELTCLGKQGADS*RLLAES
Trigger: GCTCTCAGCCAGCAGCCTTCAGCTGTCAGCCCCCTG...CTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGGCCCCACTGCCTCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CCA 90 bp CTGAGAGCACTCCCAGTAGCTGTGGGAAGAGGCCCAGGAAGCATGGTGGCTGGGTGGTTACCACAGTGCTaGGCCCAGGGTAAACGCTCG +
Preference number: 4 (lower is better)
Translates to: LRALPVAVGRGPGSMVAGWLPQC*AQGKRS
Trigger: CGAGCGTTTACCCTGGGCCCAGCACTGTGGTAACCA...CCCAGCCACCATGCTTCCTGGGCCTCTTCCCACAGCTACTGGGAGTGCTCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CTGAGAGCACTCCCAGTAGCTGTGGGAAGAGGCCCAGGAAGCATGGTGGCTGGGTGGCTACAGATGGCATaGCCCTGCTCCAGAACCCCA +
Preference number: 4 (lower is better)
Translates to: LRALPVAVGRGPGSMVAGWLQMA*PCSRTP
Trigger: TGGGGTTCTGGAGCAGGGCCATGCCATCTGTAGCCA...CCCAGCCACCATGCTTCCTGGGCCTCTTCCCACAGCTACTGGGAGTGCTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp GGTCTGGGCAGCACAGGATGGTGTCCACTACAGCCCACATTTGTGCTGCTCAGCAAGGATGCCCCTGTGTaGGGCTGCAGTGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: GLGSTGWCPLQPTFVLLSKDAPV*GCSAAT
Trigger: CGTGGCTGCACTGCAGCCCCACACAGGGGCATCCTT...GCTGAGCAGCACAAATGTGGGCTGTAGTGGACACCATCCTGTGCTGCCCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CTGAGAGCACTCCCAGTAGCTGTGGGAAGAGGCCCAGGAAGCATGGTGGCTGGGCTCGGTGCTTTAATGTaGAGACCAGGGCTCTCACCG +
Preference number: 4 (lower is better)
Translates to: LRALPVAVGRGPGSMVAGLGALM*RPGLSP
Trigger: CGGTGAGAGCCCTGGTCTTCACATTAAAGCACCGAG...CCCAGCCACCATGCTTCCTGGGCCTCTTCCCACAGCTACTGGGAGTGCTCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp AAGCCCTATGCCAAGGACTGGAGGTCCAGTGAAGGAGAGACGGACAAGGTCGCTGAGCCGCTCTTCACCTaGGCCCGGATTTCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: KPYAKDWRSSEGETDKVAEPLFT*ARISAR
Trigger: CCGAGCTGAAATCCGGGCTCAGGTGAAGAGCGGCTC...AGCGACCTTGTCCGTCTCTCCTTCACTGGACCTCCAGTCCTTGGCATAGGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR TCA 90 bp CTCTCAGGGTTTCTGAGCTGGTGCCCCAGCTGTGCCTTCGACACAGTTGCAAGCGGGGATGGAACCGAGTaGGCGGCAGCGGTAATTGAG +
Preference number: 4 (lower is better)
Translates to: LSGFLSWCPSCAFDTVASGDGTE*AAAVIE
Trigger: CTCAATTACCGCTGCCGCTCACTCGGTTCCATCCCC...GCTTGCAACTGTGTCGAAGGCACAGCTGGGGCACCAGCTCAGAAACCCTGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp GGCCGGCCCACCCAGGAATGCCCATCCAATCGGTCCAGACTGGGATTTGGAGCCGGTGCCATCCATTCATaGGCACATATGCATGGAGCC +
Preference number: 4 (lower is better)
Translates to: GRPTQECPSNRSRLGFGAGAIHS*AHMHGA
Trigger: GGCTCCATGCATATGTGCTCATGAATGGATGGCACC...GGCTCCAAATCCCAGTCTGGACCGATTGGATGGGCATTCCTGGGTGGGCCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR TCA 90 bp CCCGGGAGCAACGGGGCCAGTAAAAAGCTTTCTGCCCGGTGTGGGAAGGTTGGACTGGGAATACAGGTGTaGGCCAGTGAGCCCAACCCA +
Preference number: 4 (lower is better)
Translates to: PGSNGASKKLSARCGKVGLGIQV*ASEPNP
Trigger: TGGGTTGGGCTCACTGGCTCACACCTGTATTCCCAG...TCCAACCTTCCCACACCGGGCAGAAAGCTTTTTACTGGCCCCGTTGCTCCCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR GCA 90 bp TGTCCCTGCCACATCCCAGACCATTGGCCCCTAAAAATCTCACTGCACCCTGCCGGGTCTGTACAAACGTaGCGACTGGCAGCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: CPCHIPDHWPLKISLHPAGSVQT*RLAASR
Trigger: GCGGCTCGCTGCCAGTCGGCACGTTTGTACAGACCC...GGCAGGGTGCAGTGAGATTTTTAGGGGCCAATGGTCTGGGATGTGGCAGGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CTGCGCCTCCGCTCTGGGTTCCACACCATCTGTCGGTCCACACGCTTGGGATTACTCGGTGCTTTAATGTaGAGACCAGGGCTCTCACCG +
Preference number: 4 (lower is better)
Translates to: LRLRSGFHTICRSTRLGLLGALM*RPGLSP
Trigger: CGGTGAGAGCCCTGGTCTTCACATTAAAGCACCGAG...TAATCCCAAGCGTGTGGACCGACAGATGGTGTGGAACCCAGAGCGGAGGCGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR TCA 90 bp CTCTCAGGGTTTCTGAGCTGGTGCCCCAGCTGTGCCTTCGACACAGTTGCAAGCTTCTCTCAGGGTTTCTaGGCTGGTGCCCCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: LSGFLSWCPSCAFDTVASFSQGF*AGAPAV
Trigger: CACAGCTGGGGCACCAGCTCAGAAACCCTGAGAGAA...GCTTGCAACTGTGTCGAAGGCACAGCTGGGGCACCAGCTCAGAAACCCTGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CTCTGTCTGCAAAGGAACGGCACCATGGGAAAATCTAGCACAGCCAGCATCAGCCAGGGGGCTGACAGCTaGAGGCTGCTGGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: LCLQRNGTMGKSSTASISQGADS*RLLAES
Trigger: GCTCTCAGCCAGCAGCCTTCAGCTGTCAGCCCCCTG...GCTGATGCTGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTTGCAGACAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp CATCCAATCGGTCCAGACTGGGATTTGGAGCCTGTCTGTGGCCTACTGGCTCAGTGGCGCCCTCCAGACTaGAACCTCGTAGGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: HPIGPDWDLEPVCGLLAQWRPPD*NLVGSQ
Trigger: TTGGGAGCCTACGAGGTTGCAGTCTGGAGGGCGCCA...CTGAGCCAGTAGGCCACAGACAGGCTCCAAATCCCAGTCTGGACCGATTGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR GCA 90 bp GGCTCTGCCAGCTCATCTGTCCCACACCGCATGGCCACTTGTGTTGTAGCCTGGTGCTGGGATTACAGGTaGCTGCCACCAGATCTGGCT +
Preference number: 4 (lower is better)
Translates to: GSASSSVPHRMATCVVAWCWDYR*LPPDLA
Trigger: AGCCAGATCTGGTGGCAGGCACCTGTAATCCCAGCA...CCAGGCTACAACACAAGTGGCCATGCGGTGTGGGACAGATGAGCTGGCAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp GAGAGGCACCAGAGCTATCTAAACTCAGGGGGATGGAACCGAGTGAGCGGCAGCGACCCTGTCACCATGTaGCCACTGCTGCACCTCCTT +
Preference number: 4 (lower is better)
Translates to: ERHQSYLNSGGWNRVSGSDPVTM*PLLHLL
Trigger: AAGGAGGTGCAGCAGTGGGCACATGGTGACAGGGTC...GCTGCCGCTCACTCGGTTCCATCCCCCTGAGTTTAGATAGCTCTGGTGCCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp AAGCCCTATGCCAAGGACTGGAGGTCCAGTGAAGGAGAGACGGACAAGGTCGCTCCTGGTAGCTGCTGTTaGCGCCCTCCAGACTGCAAC +
Preference number: 4 (lower is better)
Translates to: KPYAKDWRSSEGETDKVAPGSCC*RPPDCN
Trigger: GTTGCAGTCTGGAGGGCGCCAACAGCAGCTACCAGG...AGCGACCTTGTCCGTCTCTCCTTCACTGGACCTCCAGTCCTTGGCATAGGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CCA 90 bp CTCTCAGGGTTTCTGAGCTGGTGCCCCAGCTGTGCCTTCGACACAGTTGCAAGCGGAAGAAGGGGTAGTTaGCTGGCTCTCGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LSGFLSWCPSCAFDTVASGRRGS*LALAGS
Trigger: TGAGCCTGCGAGAGCCAGCCAACTACCCCTTCTTCC...GCTTGCAACTGTGTCGAAGGCACAGCTGGGGCACCAGCTCAGAAACCCTGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp GGTCTGGGCAGCACAGGATGGTGTCCACTACAGCCCACATTTGTGCTGCTCAGCTCAGCATGGGGGCTCTaGAGACCAACGCAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: GLGSTGWCPLQPTFVLLSSAWGL*RPTQKV
Trigger: GACCTTCTGCGTTGGTCTCCAGAGCCCCCATGCTGA...GCTGAGCAGCACAAATGTGGGCTGTAGTGGACACCATCCTGTGCTGCCCAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp AAGCTGCGCCTCCGCTCTGGGTTCCACACCATCTGTCGGTCCACACGCTTGGGAAGGCGGGAGCAGAGATaGAACGTTTCCCGTTCAATA +
Preference number: 4 (lower is better)
Translates to: KLRLRSGFHTICRSTRLGRREQR*NVSRSI
Trigger: TATTGAACGGGAAACGTTTCATCTCTGCTCCCGCCT...TCCCAAGCGTGTGGACCGACAGATGGTGTGGAACCCAGAGCGGAGGCGCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR TCA 90 bp GGCTCTGCCAGCTCATCTGTCCCACACCGCATGGCCACTTGTGTTGTAGCCTGGAGCGGCAGCGGTAATTaGGTTTCAGTTACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GSASSSVPHRMATCVVAWSGSGN*VSVTCR
Trigger: CCTGCAGGTAACTGAAACTCAATTACCGCTGCCGCT...CCAGGCTACAACACAAGTGGCCATGCGGTGTGGGACAGATGAGCTGGCAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CTGAGAGCACTCCCAGTAGCTGTGGGAAGAGGCCCAGGAAGCATGGTGGCTGGGAACCTCCCCAGGTTATaGGTAAGTCCATCCCTGACA +
Preference number: 4 (lower is better)
Translates to: LRALPVAVGRGPGSMVAGNLPRL*VSPSLT
Trigger: TGTCAGGGATGGACTTACTCATAACCTGGGGAGGTT...CCCAGCCACCATGCTTCCTGGGCCTCTTCCCACAGCTACTGGGAGTGCTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CTGAGATGGCCCTTCCAAGTTGTCAAGTTGAGGCAGTGGGGCCAGGCCTTCATAAAATTCCCAGGGGGCTaGCAGCTGAAGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LRWPFQVVKLRQWGQAFIKFPGG*QLKAAG
Trigger: GCCAGCAGCCTTCAGCTGTCAGCCCCCTGGGAATTT...TATGAAGGCCTGGCCCCACTGCCTCAACTTGACAACTTGGAAGGGCCATCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR GCA 90 bp GGCTCTGCCAGCTCATCTGTCCCACACCGCATGGCCACTTGTGTTGTAGCCTGGCCGACTACCTTGACGTaGTTGCAGCGTGTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: GSASSSVPHRMATCVVAWPTTLT*LQRVQE
Trigger: TTCCTGAACACGCTGCAAGCACGTCAAGGTAGTCGG...CCAGGCTACAACACAAGTGGCCATGCGGTGTGGGACAGATGAGCTGGCAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp CCCGGGAGCAACGGGGCCAGTAAAAAGCTTTCTGCCCGGTGTGGGAAGGTTGGATCCGAATCCTCTGTCTaGAAAGGAACGGCACCATGG +
Preference number: 4 (lower is better)
Translates to: PGSNGASKKLSARCGKVGSESSV*KGTAPW
Trigger: CCATGGTGCCGTTCCTTTGCAGACAGAGGATTCGGA...TCCAACCTTCCCACACCGGGCAGAAAGCTTTTTACTGGCCCCGTTGCTCCCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR GCA 90 bp AAGCCCTATGCCAAGGACTGGAGGTCCAGTGAAGGAGAGACGGACAAGGTCGCTGACTGTCTGCTCGGCTaGGTGGACTATCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: KPYAKDWRSSEGETDKVADCLLG*VDYQRP
Trigger: TGGCCTCTGATAGTCCACGCAGCCGAGCAGACAGTC...AGCGACCTTGTCCGTCTCTCCTTCACTGGACCTCCAGTCCTTGGCATAGGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CCA 90 bp GGACTTAGGAGTTGGACAGGCCACTCTAGAGGTCAATGTGGAGAGGGGACTGGCTACAAACGTGCCGACTaGCAGCGAGCCGCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: GLRSWTGHSRGQCGEGTGYKRAD*QRAALH
Trigger: GTGAAGAGCGGCTCGCTGCCAGTCGGCACGTTTGTA...GCCAGTCCCCTCTCCACATTGACCTCTAGAGTGGCCTGTCCAACTCCTAAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CCA 90 bp GTTGAGGCAGTGGGGCCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGATTTTCCTCTCTGCCTaGCCCAGGGCTGGAACCGTC +
Preference number: 4 (lower is better)
Translates to: VEAVGPGLHNLELTCLGKIFLSA*PRAGTV
Trigger: GACGGTTCCAGCCCTGGGCCAGGCAGAGAGGAAAAT...CTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGGCCCCACTGCCTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CTGCGCCTCCGCTCTGGGTTCCACACCATCTGTCGGTCCACACGCTTGGGATTAGTGATAGCAACCGTATaGCGCTTCCTAGTGACAGCC +
Preference number: 4 (lower is better)
Translates to: LRLRSGFHTICRSTRLGLVIATV*RFLVTA
Trigger: GGCTGTCACTAGGAAGCGCCATACGGTTGCTATCAC...TAATCCCAAGCGTGTGGACCGACAGATGGTGTGGAACCCAGAGCGGAGGCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CCA 90 bp CTGAGAGCACTCCCAGTAGCTGTGGGAAGAGGCCCAGGAAGCATGGTGGCTGGGCAGATAAGTGAGCTCTaGGAAGAAGGGGTAGTTGGC +
Preference number: 4 (lower is better)
Translates to: LRALPVAVGRGPGSMVAGQISEL*EEGVVG
Trigger: GCCAACTACCCCTTCTTCCCAGAGCTCACTTATCTG...CCCAGCCACCATGCTTCCTGGGCCTCTTCCCACAGCTACTGGGAGTGCTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CTGAGAGCACTCCCAGTAGCTGTGGGAAGAGGCCCAGGAAGCATGGTGGCTGGGTGGTTTAAGTTCTGGTaGACCTCCTTTCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: LRALPVAVGRGPGSMVAGWFKFW*TSFPGG
Trigger: TCCCCCAGGAAAGGAGGTCCACCAGAACTTAAACCA...CCCAGCCACCATGCTTCCTGGGCCTCTTCCCACAGCTACTGGGAGTGCTCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CCA 90 bp CATCCAATCGGTCCAGACTGGGATTTGGAGCCTGTCTGTGGCCTACTGGCTCAGGACCCAGCAGAAGTTTaGCCCAGGATTGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: HPIGPDWDLEPVCGLLAQDPAEV*PRIVAE
Trigger: CTCGGCCACAATCCTGGGCCAAACTTCTGCTGGGTC...CTGAGCCAGTAGGCCACAGACAGGCTCCAAATCCCAGTCTGGACCGATTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR CAA 72 bp CAGGCATCTGTTCCCACCACAGATACCTCGGGTACTTaGGGCTCTGCCAGCTCATCTGTCCCACACCGCATG +
Preference number: 4 (lower is better)
Translates to: QASVPTTDTSGT*GSASSSVPHRM
Trigger: CATGCGGTGTGGGACAGATGAGCTGGCAGAGCCCAAAGTACCCGAGGTATCTGTGGTGGGAACAGATGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp GGTCTGGGCAGCACAGGATGGTGTCCACTACAGCCCACATTTGTGCTGCTCAGCCTAGATCAGTCTTGGTaGGTGGGAGCCATGCCATAC +
Preference number: 4 (lower is better)
Translates to: GLGSTGWCPLQPTFVLLSLDQSW*VGAMPY
Trigger: GTATGGCATGGCTCCCACTCACCAAGACTGATCTAG...GCTGAGCAGCACAAATGTGGGCTGTAGTGGACACCATCCTGTGCTGCCCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CTGAGATGGCCCTTCCAAGTTGTCAAGTTGAGGCAGTGGGGCCAGGCCTTCATATCCAAGTTGTCAAGTTaGGGCAGTGGGGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LRWPFQVVKLRQWGQAFISKLSS*GSGARP
Trigger: AGGCCTGGCCCCACTGCCTCAACTTGACAACTTGGA...TATGAAGGCCTGGCCCCACTGCCTCAACTTGACAACTTGGAAGGGCCATCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR GCA 90 bp CTGAGAGCACTCCCAGTAGCTGTGGGAAGAGGCCCAGGAAGCATGGTGGCTGGGCGGATTTCAGCTCGGTaGTTTAATGTGAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: LRALPVAVGRGPGSMVAGRISAR*FNVKTR
Trigger: CCTGGTCTTCACATTAAAGCACCGAGCTGAAATCCG...CCCAGCCACCATGCTTCCTGGGCCTCTTCCCACAGCTACTGGGAGTGCTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp ATAGCAACCGTATGGCGCTTCCTAGTGACAGCCAGTGTGCGTTCTGTTAGGCAGGGGTTTCTGAGCTGGTaGCCCAGCTGTGCCTTCGAC +
Preference number: 4 (lower is better)
Translates to: IATVWRFLVTASVRSVRQGFLSW*PSCAFD
Trigger: GTCGAAGGCACAGCTGGGGCACCAGCTCAGAAACCC...CTGCCTAACAGAACGCACACTGGCTGTCACTAGGAAGCGCCATACGGTTGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp CTCTGTCTGCAAAGGAACGGCACCATGGGAAAATCTAGCACAGCCAGCATCAGCCGGCCCACCCAGGAATaGCCATCCAATCGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LCLQRNGTMGKSSTASISRPTQE*PSNRSR
Trigger: TCTGGACCGATTGGATGGGCATTCCTGGGTGGGCCG...GCTGATGCTGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTTGCAGACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR GCA 90 bp CCCTGCATGGGGCCAAGCCCTATGCCAAGGACTGGAGGTCCAGTGAAGGAGAGAAGGTGCACGCCACCATaGCTGGCTATTTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: PCMGPSPMPRTGGPVKERRCTPP*LAICCC
Trigger: ACAACAACAAATAGCCAGGCATGGTGGCGTGCACCT...TCTCTCCTTCACTGGACCTCCAGTCCTTGGCATAGGGCTTGGCCCCATGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CCA 90 bp GAGAGGCACCAGAGCTATCTAAACTCAGGGGGATGGAACCGAGTGAGCGGCAGCGTGTGTGGGCAAGATTaGGAGGGATGTCTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: ERHQSYLNSGGWNRVSGSVCGQD*EGCLQA
Trigger: AGCTTGCAGACATCCCTCCCAATCTTGCCCACACAC...GCTGCCGCTCACTCGGTTCCATCCCCCTGAGTTTAGATAGCTCTGGTGCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp GGCTCTGCCAGCTCATCTGTCCCACACCGCATGGCCACTTGTGTTGTAGCCTGGGGTGGCCTCAGAGACTaGTTGATGTCAACTGTGTGT +
Preference number: 4 (lower is better)
Translates to: GSASSSVPHRMATCVVAWGGLRD*LMSTVC
Trigger: ACACACAGTTGACATCAACCAGTCTCTGAGGCCACC...CCAGGCTACAACACAAGTGGCCATGCGGTGTGGGACAGATGAGCTGGCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp AAGCCCTATGCCAAGGACTGGAGGTCCAGTGAAGGAGAGACGGACAAGGTCGCTCCCTATGCCAAGGACTaGAGGTCCAGTGAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: KPYAKDWRSSEGETDKVAPYAKD*RSSEGE
Trigger: CTCTCCTTCACTGGACCTCCAGTCCTTGGCATAGGG...AGCGACCTTGTCCGTCTCTCCTTCACTGGACCTCCAGTCCTTGGCATAGGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CCA 90 bp GGACTTAGGAGTTGGACAGGCCACTCTAGAGGTCAATGTGGAGAGGGGACTGGCCTGTCTGTGGCCTACTaGCTCAGTCACCTTGGGCAA +
Preference number: 4 (lower is better)
Translates to: GLRSWTGHSRGQCGEGTGLSVAY*LSHLGQ
Trigger: TTGCCCAAGGTGACTGAGCCAGTAGGCCACAGACAG...GCCAGTCCCCTCTCCACATTGACCTCTAGAGTGGCCTGTCCAACTCCTAAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR TCA 90 bp CCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGGGGTATGTCAGTGAGGGACTCCGACTACCTTaGCGTGCTTGCAGCGTGTTC +
Preference number: 4 (lower is better)
Translates to: PGLHNLELTCLGKGYVSEGLRLP*RACSVF
Trigger: GAACACGCTGCAAGCACGTCAAGGTAGTCGGAGTCC...CTCACTGACATACCCCTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp GGTCTGGGCAGCACAGGATGGTGTCCACTACAGCCCACATTTGTGCTGCTCAGCAGGCGGGAGCAGAGATaGAACGTTTCCCGTTCAATA +
Preference number: 4 (lower is better)
Translates to: GLGSTGWCPLQPTFVLLSRREQR*NVSRSI
Trigger: TATTGAACGGGAAACGTTTCATCTCTGCTCCCGCCT...GCTGAGCAGCACAAATGTGGGCTGTAGTGGACACCATCCTGTGCTGCCCAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CTCTGTCTGCAAAGGAACGGCACCATGGGAAAATCTAGCACAGCCAGCATCAGCTCCAAGTTGTCAAGTTaGGGCAGTGGGGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LCLQRNGTMGKSSTASISSKLSS*GSGARP
Trigger: AGGCCTGGCCCCACTGCCTCAACTTGACAACTTGGA...GCTGATGCTGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTTGCAGACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp GGTCTGGGCAGCACAGGATGGTGTCCACTACAGCCCACATTTGTGCTGCTCAGCGCAGTGAGCTGTAATTaGACCACTGTACTGCACCCT +
Preference number: 4 (lower is better)
Translates to: GLGSTGWCPLQPTFVLLSAVSCN*TTVLHP
Trigger: AGGGTGCAGTACAGTGGTGCAATTACAGCTCACTGC...GCTGAGCAGCACAAATGTGGGCTGTAGTGGACACCATCCTGTGCTGCCCAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp CTCTGTCTGCAAAGGAACGGCACCATGGGAAAATCTAGCACAGCCAGCATCAGCCTGACAGCTGAAGGCTaGTGGCTGAGAGCACTCCCA +
Preference number: 4 (lower is better)
Translates to: LCLQRNGTMGKSSTASISLTAEG*WLRALP
Trigger: TGGGAGTGCTCTCAGCCAGCAGCCTTCAGCTGTCAG...GCTGATGCTGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTTGCAGACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp CCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGGGGTATGTCAGTGAGCTGACAGCTGAAGGCTaGTGGCTGAGAGCACTCCCA +
Preference number: 4 (lower is better)
Translates to: PGLHNLELTCLGKGYVSELTAEG*WLRALP
Trigger: TGGGAGTGCTCTCAGCCAGCAGCCTTCAGCTGTCAG...CTCACTGACATACCCCTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR GCA 90 bp CCAGTAAAAAGCTTTCTGCCCGGTGTGGGAAGGTTGGACTTAGGAGTTGGACAGGGAGCCCAGACTGTCTaGTCGGCTGCGTGGACTATC +
Preference number: 4 (lower is better)
Translates to: PVKSFLPGVGRLDLGVGQGAQTV*SAAWTI
Trigger: GATAGTCCACGCAGCCGAGCAGACAGTCTGGGCTCC...CTGTCCAACTCCTAAGTCCAACCTTCCCACACCGGGCAGAAAGCTTTTTACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR GCA 90 bp ACCCAGGAATGCCCATCCAATCGGTCCAGACTGGGATTTGGAGCCTGTCTGTGGCTTGGCCTCCTGAAGTaGTGGGAATACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: TQECPSNRSRLGFGACLWLGLLK*WEYRCE
Trigger: CTCACACCTGTATTCCCAGCACTTCAGGAGGCCAAG...CCACAGACAGGCTCCAAATCCCAGTCTGGACCGATTGGATGGGCATTCCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR GCA 90 bp ATAGCAACCGTATGGCGCTTCCTAGTGACAGCCAGTGTGCGTTCTGTTAGGCAGACCATCCTAGCTCACTaGAGCCTCAACCTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: IATVWRFLVTASVRSVRQTILAH*SLNLPA
Trigger: AGCCGGGAGGTTGAGGCTGCAGTGAGCTAGGATGGT...CTGCCTAACAGAACGCACACTGGCTGTCACTAGGAAGCGCCATACGGTTGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CCA 90 bp CTGAGATGGCCCTTCCAAGTTGTCAAGTTGAGGCAGTGGGGCCAGGCCTTCATATTAGTAGCCTCAGCATaGGGGCTCTGGAGACCAACG +
Preference number: 4 (lower is better)
Translates to: LRWPFQVVKLRQWGQAFILVASA*GLWRPT
Trigger: CGTTGGTCTCCAGAGCCCCCATGCTGAGGCTACTAA...TATGAAGGCCTGGCCCCACTGCCTCAACTTGACAACTTGGAAGGGCCATCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CTCTGTCTGCAAAGGAACGGCACCATGGGAAAATCTAGCACAGCCAGCATCAGCCCATTGTGTCAGCTCTaGGGTGGCCTCAGAGACTGG +
Preference number: 4 (lower is better)
Translates to: LCLQRNGTMGKSSTASISPLCQL*GGLRDW
Trigger: CCAGTCTCTGAGGCCACCCCAGAGCTGACACAATGG...GCTGATGCTGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTTGCAGACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGGGGTATGTCAGTGAGCTGCACCCTGGAGGATaGCAGCTCTTCTCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: PGLHNLELTCLGKGYVSELHPGG*QLFSQG
Trigger: ACCCTGAGAGAAGAGCTGCCATCCTCCAGGGTGCAG...CTCACTGACATACCCCTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp GGTCTGGGCAGCACAGGATGGTGTCCACTACAGCCCACATTTGTGCTGCTCAGCAAAATTAGCTGGGTGTaGTGGCATGGTAGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GLGSTGWCPLQPTFVLLSKISWV*WHGSPS
Trigger: GCTGGGACTACCATGCCACCACACCCAGCTAATTTT...GCTGAGCAGCACAAATGTGGGCTGTAGTGGACACCATCCTGTGCTGCCCAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
3UTR CAA 72 bp GGGCCAGTAAAAAGCTTTCTGCCCGGTGTGGGAAGGTaGGACTTAGGAGTTGGACAGGCCACTCTAGAGGTC +
Preference number: 4 (lower is better)
Translates to: GPVKSFLPGVGR*DLGVGQATLEV
Trigger: GACCTCTAGAGTGGCCTGTCCAACTCCTAAGTCCAACCTTCCCACACCGGGCAGAAAGCTTTTTACTGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR TCA 90 bp GGTCTGGGCAGCACAGGATGGTGTCCACTACAGCCCACATTTGTGCTGCTCAGCTCTTCCAGGGAGAGCTaGAACGTTCAGATAAGTGAG +
Preference number: 4 (lower is better)
Translates to: GLGSTGWCPLQPTFVLLSSSRES*NVQISE
Trigger: CTCACTTATCTGAACGTTTCAGCTCTCCCTGGAAGA...GCTGAGCAGCACAAATGTGGGCTGTAGTGGACACCATCCTGTGCTGCCCAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp GTTGAGGCAGTGGGGCCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGTACAGAGCCCTAAACTaGGAGCGCCAGCGTATTCAA +
Preference number: 4 (lower is better)
Translates to: VEAVGPGLHNLELTCLGKYRALN*ERQRIQ
Trigger: TTGAATACGCTGGCGCTCTCAGTTTAGGGCTCTGTA...CTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGGCCCCACTGCCTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CTCTGTCTGCAAAGGAACGGCACCATGGGAAAATCTAGCACAGCCAGCATCAGCATAATCCCCACGTGTTaGGGGAGGGACATGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LCLQRNGTMGKSSTASISIIPTC*GRDMVG
Trigger: TCCCACCATGTCCCTCCCTCAACACGTGGGGATTAT...GCTGATGCTGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTTGCAGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp TGTCCCTGCCACATCCCAGACCATTGGCCCCTAAAAATCTCACTGCACCCTGCCTGCCTAGTAGTCTCCTaGTATGAGGAGCTCAAGTGC +
Preference number: 4 (lower is better)
Translates to: CPCHIPDHWPLKISLHPACLVVS*YEELKC
Trigger: GCACTTGAGCTCCTCATATCAGGAGACTACTAGGCA...GGCAGGGTGCAGTGAGATTTTTAGGGGCCAATGGTCTGGGATGTGGCAGGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CGTTCTGTTAGGCAGCACCAGCGCACTGCAGCTAATGAAGCACATTCCTGCAGGTGCATCTTGGCCTCCTaGAGTGCTGGGAATACAGGT +
Preference number: 4 (lower is better)
Translates to: RSVRQHQRTAANEAHSCRCILAS*SAGNTG
Trigger: ACCTGTATTCCCAGCACTTCAGGAGGCCAAGATGCA...CCTGCAGGAATGTGCTTCATTAGCTGCAGTGCGCTGGTGCTGCCTAACAGAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR GCA 90 bp ATAGCAACCGTATGGCGCTTCCTAGTGACAGCCAGTGTGCGTTCTGTTAGGCAGCCTGATCCTGGTCCTTaGCTTCCTCTCCTGCCTCAT +
Preference number: 4 (lower is better)
Translates to: IATVWRFLVTASVRSVRQPDPGP*LPLLPH
Trigger: ATGAGGCAGGAGAGGAAGGCAAGGACCAGGATCAGG...CTGCCTAACAGAACGCACACTGGCTGTCACTAGGAAGCGCCATACGGTTGCTAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp GGCTCTGCCAGCTCATCTGTCCCACACCGCATGGCCACTTGTGTTGTAGCCTGGTTATCTCTCCTTTATTaGTGTGTCCCCAGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: GSASSSVPHRMATCVVAWLSLLY*CVPSAS
Trigger: ACTGGCACTGGGGACACAGCAATAAAGGAGAGATAA...CCAGGCTACAACACAAGTGGCCATGCGGTGTGGGACAGATGAGCTGGCAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp CGTTCTGTTAGGCAGCACCAGCGCACTGCAGCTAATGAAGCACATTCCTGCAGGCCTCTGGCCCTGCTATaGCCAACCCCAGTTGTATTA +
Preference number: 4 (lower is better)
Translates to: RSVRQHQRTAANEAHSCRPLALL*PTPVVL
Trigger: TAATACAACTGGGGTTGGGCATAGCAGGGCCAGAGG...CCTGCAGGAATGTGCTTCATTAGCTGCAGTGCGCTGGTGCTGCCTAACAGAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp CCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGGGGTATGTCAGTGAGCCATGTGCCCACTGCTaGACCTCCTTTGCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: PGLHNLELTCLGKGYVSEPCAHC*TSFAVE
Trigger: TTCCACAGCAAAGGAGGTGCAGCAGTGGGCACATGG...CTCACTGACATACCCCTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp CTGAGATGGCCCTTCCAAGTTGTCAAGTTGAGGCAGTGGGGCCAGGCCTTCATACTGAGGCAGGTGGACTaGTTGAGGCCAGAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LRWPFQVVKLRQWGQAFILRQVD*LRPEVQ
Trigger: TTGAACTTCTGGCCTCAAGCAGTCCACCTGCCTCAG...TATGAAGGCCTGGCCCCACTGCCTCAACTTGACAACTTGGAAGGGCCATCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CCA 90 bp CTGCTGAGCCCTTTCCTGCTCTGGGCCCCAATCAAAACACAACTTTCTGTGTCATACAAACGTGCCGACTaGCAGCGAGCCGCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LLSPFLLWAPIKTQLSVSYKRAD*QRAALH
Trigger: GTGAAGAGCGGCTCGCTGCCAGTCGGCACGTTTGTA...TGACACAGAAAGTTGTGTTTTGATTGGGGCCCAGAGCAGGAAAGGGCTCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CTCTCAGGGTTTCTGAGCTGGTGCCCCAGCTGTGCCTTCGACACAGTTGCAAGCTCAGGTCACTTTTTGTaGGTCTGTACAAACGTGCCG +
Preference number: 4 (lower is better)
Translates to: LSGFLSWCPSCAFDTVASSGHFL*VCTNVP
Trigger: CGGCACGTTTGTACAGACCCACAAAAAGTGACCTGA...GCTTGCAACTGTGTCGAAGGCACAGCTGGGGCACCAGCTCAGAAACCCTGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CTCTGTCTGCAAAGGAACGGCACCATGGGAAAATCTAGCACAGCCAGCATCAGCCAAACCACCAGGACTTaGTTGGCTGAGGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LCLQRNGTMGKSSTASISQTTRT*LAEGGR
Trigger: TCTCCCACCCTCAGCCAACCAAGTCCTGGTGGTTTG...GCTGATGCTGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTTGCAGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp TGTCCCTGCCACATCCCAGACCATTGGCCCCTAAAAATCTCACTGCACCCTGCCAGCCCTTTCCTGCTCTaGGCCCCAATCAAAACACAA +
Preference number: 4 (lower is better)
Translates to: CPCHIPDHWPLKISLHPASPFLL*APIKTQ
Trigger: TTGTGTTTTGATTGGGGCCCAGAGCAGGAAAGGGCT...GGCAGGGTGCAGTGAGATTTTTAGGGGCCAATGGTCTGGGATGTGGCAGGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp GAGAGGCACCAGAGCTATCTAAACTCAGGGGGATGGAACCGAGTGAGCGGCAGCGCACCTCCTTTGCTGTaGAATCATATGGGATCCTGT +
Preference number: 4 (lower is better)
Translates to: ERHQSYLNSGGWNRVSGSAPPLL*NHMGSC
Trigger: ACAGGATCCCATATGATTCCACAGCAAAGGAGGTGC...GCTGCCGCTCACTCGGTTCCATCCCCCTGAGTTTAGATAGCTCTGGTGCCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CTCTGTCTGCAAAGGAACGGCACCATGGGAAAATCTAGCACAGCCAGCATCAGCGTCCAGACTGGGATTTaGAGCCTGTCTGTGGCCTAC +
Preference number: 4 (lower is better)
Translates to: LCLQRNGTMGKSSTASISVQTGI*SLSVAY
Trigger: GTAGGCCACAGACAGGCTCCAAATCCCAGTCTGGAC...GCTGATGCTGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTTGCAGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR CAA 72 bp GCCAGCATCAGCCATCACCCAAACTCAAAAGCGTCTTaGAACGGCAGAGACAGGCCCATTTTCCTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: ASISHHPNSKAS*NGRDRPIFLSA
Trigger: GGCAGAGAGGAAAATGGGCCTGTCTCTGCCGTTCAAAGACGCTTTTGAGTTTGGGTGATGGCTGATGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000648983.1
CDS-3UTR TCA 90 bp CTGCGCCTCCGCTCTGGGTTCCACACCATCTGTCGGTCCACACGCTTGGGATTACCAGAATCTTTCTTCTaGGGGCTATTCTGGATTCTA +
Preference number: 4 (lower is better)
Translates to: LRLRSGFHTICRSTRLGLPESFF*GLFWIL
Trigger: TAGAATCCAGAATAGCCCTCAGAAGAAAGATTCTGG...TAATCCCAAGCGTGTGGACCGACAGATGGTGTGGAACCCAGAGCGGAGGCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR TCA 90 bp CTCTGTCTGCAAAGGAACGGCACCATGGGAAAATCTAGCACAGCCAGCATCAGCACTCAAAAGCGTCTTTaGACGGCAGAGACAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LCLQRNGTMGKSSTASISTQKRL*TAETGP
Trigger: TGGGCCTGTCTCTGCCGTTCAAAGACGCTTTTGAGT...GCTGATGCTGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTTGCAGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000648983.1
CDS-3UTR TCA 90 bp CGTTCTGTTAGGCAGCACCAGCGCACTGCAGCTAATGAAGCACATTCCTGCAGGGATGTTTCTGTTCAGTaGGCCTCAGGCTCCCATTTG +
Preference number: 4 (lower is better)
Translates to: RSVRQHQRTAANEAHSCRDVSVQ*ASGSHL
Trigger: CAAATGGGAGCCTGAGGCTCACTGAACAGAAACATC...CCTGCAGGAATGTGCTTCATTAGCTGCAGTGCGCTGGTGCTGCCTAACAGAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CTGAGAGCACTCCCAGTAGCTGTGGGAAGAGGCCCAGGAAGCATGGTGGCTGGGAAGACATGTTATATCTaGGATGTCTATGGGGCATCT +
Preference number: 4 (lower is better)
Translates to: LRALPVAVGRGPGSMVAGKTCYI*DVYGAS
Trigger: AGATGCCCCATAGACATCTCAGATATAACATGTCTT...CCCAGCCACCATGCTTCCTGGGCCTCTTCCCACAGCTACTGGGAGTGCTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGGGGTATGTCAGTGAGAAGACCCTTCAAACCTaGTCCTGGTCCTTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PGLHNLELTCLGKGYVSEKTLQT*SWSLPS
Trigger: GGAAGGCAAGGACCAGGATCAGGTTTGAAGGGTCTT...CTCACTGACATACCCCTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGGGGTATGTCAGTGAGGCCAAAGGTGTGAAATaGGGAACAGGCAGGTACTGG +
Preference number: 4 (lower is better)
Translates to: PGLHNLELTCLGKGYVSEAKGVK*GTGRYW
Trigger: CCAGTACCTGCCTGTTCCTCATTTCACACCTTTGGC...CTCACTGACATACCCCTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CTGAGATGGCCCTTCCAAGTTGTCAAGTTGAGGCAGTGGGGCCAGGCCTTCATATGCCTAGTAGTCTCCTaGTATGAGGAGCTCAAGTGC +
Preference number: 4 (lower is better)
Translates to: LRWPFQVVKLRQWGQAFICLVVS*YEELKC
Trigger: GCACTTGAGCTCCTCATATCAGGAGACTACTAGGCA...TATGAAGGCCTGGCCCCACTGCCTCAACTTGACAACTTGGAAGGGCCATCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR TCA 90 bp CCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGGGGTATGTCAGTGAGGGCAGGTGGACTGCTTaGGGCCAGAAGTTCAAAACT +
Preference number: 4 (lower is better)
Translates to: PGLHNLELTCLGKGYVSEGRWTA*GQKFKT
Trigger: AGTTTTGAACTTCTGGCCTCAAGCAGTCCACCTGCC...CTCACTGACATACCCCTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR TCA 90 bp CCCGGGAGCAACGGGGCCAGTAAAAAGCTTTCTGCCCGGTGTGGGAAGGTTGGAAGCTCTGCAGGGTGGTaGAATATAGTAGTAACTTCA +
Preference number: 4 (lower is better)
Translates to: PGSNGASKKLSARCGKVGSSAGW*NIVVTS
Trigger: TGAAGTTACTACTATATTTCACCACCCTGCAGAGCT...TCCAACCTTCCCACACCGGGCAGAAAGCTTTTTACTGGCCCCGTTGCTCCCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR GCA 90 bp CTCCACGTGAATCAACTGAGTACCAAAGATATACCTCCCTTCCCTCCATTGCTTAGCAGCCCTGGTAGCTaGTGTTGGCGCCCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: LHVNQLSTKDIPPFPPLLSSPGS*CWRPPD
Trigger: GTCTGGAGGGCGCCAACAGCAGCTACCAGGGCTGCT...AAGCAATGGAGGGAAGGGAGGTATATCTTTGGTACTCAGTTGATTCACGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp ACCCAGGAATGCCCATCCAATCGGTCCAGACTGGGATTTGGAGCCTGTCTGTGGCGGATTTCAGCTCGGTaGTTTAATGTGAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: TQECPSNRSRLGFGACLWRISAR*FNVKTR
Trigger: CCTGGTCTTCACATTAAAGCACCGAGCTGAAATCCG...CCACAGACAGGCTCCAAATCCCAGTCTGGACCGATTGGATGGGCATTCCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR GCA 90 bp TCACATCTTCATCTTCATCATCATCAAGTGTTTAGGCCTCACCCGGGAGCAACGGCCCATTTTCCTCTCTaGCTGGCCCAGGGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SHLHLHHHQVFRPHPGATAHFPL*LAQGWN
Trigger: GTTCCAGCCCTGGGCCAGGCAGAGAGGAAAATGGGC...CGTTGCTCCCGGGTGAGGCCTAAACACTTGATGATGATGAAGATGAAGATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR GCA 90 bp CTGAGATGGCCCTTCCAAGTTGTCAAGTTGAGGCAGTGGGGCCAGGCCTTCATACAGTGGATGGCTAGGTaGATGATGCACAACCTATGC +
Preference number: 4 (lower is better)
Translates to: LRWPFQVVKLRQWGQAFIQWMAR*MMHNLC
Trigger: GCATAGGTTGTGCATCATGCACCTAGCCATCCACTG...TATGAAGGCCTGGCCCCACTGCCTCAACTTGACAACTTGGAAGGGCCATCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp CCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGGGGTATGTCAGTGAGTGTGAAGAAGATGCCTaGTTCCCCTTGCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: PGLHNLELTCLGKGYVSECEEDA*FPLPSA
Trigger: GGCAGAAGGCAAGGGGAAGCAGGCATCTTCTTCACA...CTCACTGACATACCCCTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp CGTTCTGTTAGGCAGCACCAGCGCACTGCAGCTAATGAAGCACATTCCTGCAGGCTCCCTTCCCTCCATTaGTTAACAGCAGCTGTACCT +
Preference number: 4 (lower is better)
Translates to: RSVRQHQRTAANEAHSCRLPSLH*LTAAVP
Trigger: AGGTACAGCTGCTGTTAAGCAATGGAGGGAAGGGAG...CCTGCAGGAATGTGCTTCATTAGCTGCAGTGCGCTGGTGCTGCCTAACAGAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp CTGCTGAGCCCTTTCCTGCTCTGGGCCCCAATCAAAACACAACTTTCTGTGTCAGAAGTCAGCATATCCTaGTCAGGTCACGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LLSPFLLWAPIKTQLSVSEVSIS*SGHGLG
Trigger: GCCCAGACCGTGACCTGAGCAGGATATGCTGACTTC...TGACACAGAAAGTTGTGTTTTGATTGGGGCCCAGAGCAGGAAAGGGCTCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp AGCTTTCTGCCCGGTGTGGGAAGGTTGGACTTAGGAGTTGGACAGGCCACTCTACAAACTAATAAAAGCTaGGCCTCCGCTCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SFLPGVGRLDLGVGQATLQTNKS*ASALGS
Trigger: GGAACCCAGAGCGGAGGCGCAGCTTTTATTAGTTTG...TAGAGTGGCCTGTCCAACTCCTAAGTCCAACCTTCCCACACCGGGCAGAAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CCA 90 bp CCCTGCATGGGGCCAAGCCCTATGCCAAGGACTGGAGGTCCAGTGAAGGAGAGATCAGAGATTCAATCGTaGCCTGCTTGTAAACCTTTC +
Preference number: 4 (lower is better)
Translates to: PCMGPSPMPRTGGPVKERSEIQS*PACKPF
Trigger: GAAAGGTTTACAAGCAGGCCACGATTGAATCTCTGA...TCTCTCCTTCACTGGACCTCCAGTCCTTGGCATAGGGCTTGGCCCCATGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CCA 90 bp CCATCACCCAAACTCAAAAGCGTCTTTGAACGGCAGAGACAGGCCCATTTTCCTATTTTCCTCTCTGCCTaGCCCAGGGCTGGAACCGTC +
Preference number: 4 (lower is better)
Translates to: PSPKLKSVFERQRQAHFPIFLSA*PRAGTV
Trigger: GACGGTTCCAGCCCTGGGCCAGGCAGAGAGGAAAAT...AGGAAAATGGGCCTGTCTCTGCCGTTCAAAGACGCTTTTGAGTTTGGGTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000648983.1
CDS-3UTR CCA 90 bp CTGAGAGCACTCCCAGTAGCTGTGGGAAGAGGCCCAGGAAGCATGGTGGCTGGGCATGATGAACAGCTTTaGTCACATGGTCAACTTGAT +
Preference number: 4 (lower is better)
Translates to: LRALPVAVGRGPGSMVAGHDEQL*SHGQLD
Trigger: ATCAAGTTGACCATGTGACCAAAGCTGTTCATCATG...CCCAGCCACCATGCTTCCTGGGCCTCTTCCCACAGCTACTGGGAGTGCTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CTGCTGAGCCCTTTCCTGCTCTGGGCCCCAATCAAAACACAACTTTCTGTGTCACCTCAGCCAGTCTCATaGGAGGGTCTTGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LLSPFLLWAPIKTQLSVSPQPVS*EGLEAE
Trigger: CTCAGCTTCAAGACCCTCCCATGAGACTGGCTGAGG...TGACACAGAAAGTTGTGTTTTGATTGGGGCCCAGAGCAGGAAAGGGCTCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp TCACATCTTCATCTTCATCATCATCAAGTGTTTAGGCCTCACCCGGGAGCAACGGCATGGAGCCCTGCATaGGGCCAAGCCCTATGCCAA +
Preference number: 4 (lower is better)
Translates to: SHLHLHHHQVFRPHPGATAWSPA*GQALCQ
Trigger: TTGGCATAGGGCTTGGCCCCATGCAGGGCTCCATGC...CGTTGCTCCCGGGTGAGGCCTAAACACTTGATGATGATGAAGATGAAGATGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR CAA 72 bp GGACCCTGTCACCATGTGCCCACTGCTGCACCTCCTTaGCTGTGGAATCATATGGGATCCTGTATGACTATC +
Preference number: 4 (lower is better)
Translates to: GPCHHVPTAAPP*LWNHMGSCMTI
Trigger: GATAGTCATACAGGATCCCATATGATTCCACAGCAAAGGAGGTGCAGCAGTGGGCACATGGTGACAGGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CGTTCTGTTAGGCAGCACCAGCGCACTGCAGCTAATGAAGCACATTCCTGCAGGAAACGTTCAGATAAGTaGGCTCTGGGAAGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: RSVRQHQRTAANEAHSCRKRSDK*ALGRRG
Trigger: ACCCCTTCTTCCCAGAGCTCACTTATCTGAACGTTT...CCTGCAGGAATGTGCTTCATTAGCTGCAGTGCGCTGGTGCTGCCTAACAGAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CTCTGTCTGCAAAGGAACGGCACCATGGGAAAATCTAGCACAGCCAGCATCAGCTCCAACTATCACCACTaGAGGCTTTCAGCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LCLQRNGTMGKSSTASISSNYHH*RLSARE
Trigger: CTCTCTGGCTGAAAGCCTTCAGTGGTGATAGTTGGA...GCTGATGCTGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTTGCAGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp GAGAGGCACCAGAGCTATCTAAACTCAGGGGGATGGAACCGAGTGAGCGGCAGCTTTAAAACACACATCTaGTTAGGTCCCTCACCTCCT +
Preference number: 4 (lower is better)
Translates to: ERHQSYLNSGGWNRVSGSFKTHI*LGPSPP
Trigger: AGGAGGTGAGGGACCTAATCAGATGTGTGTTTTAAA...GCTGCCGCTCACTCGGTTCCATCCCCCTGAGTTTAGATAGCTCTGGTGCCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp GGTACATGGATGGAGCATATTCCTAGGTGTGGGATATGCTGTCTCCAAAACCTAGGCAGGAGGCTCACTTaGGGCCAGGAGTCCAAGACA +
Preference number: 4 (lower is better)
Translates to: GTWMEHIPRCGICCLQNLGRRLT*GQESKT
Trigger: TGTCTTGGACTCCTGGCCTCAAGTGAGCCTCCTGCC...TAGGTTTTGGAGACAGCATATCCCACACCTAGGAATATGCTCCATCCATGTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CTGAGATGGCCCTTCCAAGTTGTCAAGTTGAGGCAGTGGGGCCAGGCCTTCATACTTTGCCTGACCTTATaGCTTGGTGGATATGGCAGA +
Preference number: 4 (lower is better)
Translates to: LRWPFQVVKLRQWGQAFILCLTL*LGGYGR
Trigger: TCTGCCATATCCACCAAGTCATAAGGTCAGGCAAAG...TATGAAGGCCTGGCCCCACTGCCTCAACTTGACAACTTGGAAGGGCCATCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CTCTGTCTGCAAAGGAACGGCACCATGGGAAAATCTAGCACAGCCAGCATCAGCTACAACCTCCATCACTaGCTGGTCTTGAGGCCACAA +
Preference number: 4 (lower is better)
Translates to: LCLQRNGTMGKSSTASISYNLHH*LVLRPQ
Trigger: TTGTGGCCTCAAGACCAGTCAGTGATGGAGGTTGTA...GCTGATGCTGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTTGCAGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGGGGTATGTCAGTGAGTACAACCTCCATCACTaGCTGGTCTTGAGGCCACAA +
Preference number: 4 (lower is better)
Translates to: PGLHNLELTCLGKGYVSEYNLHH*LVLRPQ
Trigger: TTGTGGCCTCAAGACCAGTCAGTGATGGAGGTTGTA...CTCACTGACATACCCCTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR TCA 90 bp TGTCCCTGCCACATCCCAGACCATTGGCCCCTAAAAATCTCACTGCACCCTGCCTCCTGGCCAACATGGTaGAACCCAATCTCTCTAAAA +
Preference number: 4 (lower is better)
Translates to: CPCHIPDHWPLKISLHPASWPTW*NPISLK
Trigger: TTTTAGAGAGATTGGGTTTCACCATGTTGGCCAGGA...GGCAGGGTGCAGTGAGATTTTTAGGGGCCAATGGTCTGGGATGTGGCAGGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp CTCTGTCTGCAAAGGAACGGCACCATGGGAAAATCTAGCACAGCCAGCATCAGCCTGGAGTGTCTGGCTTaGTGGTACTGCCAATGGAAA +
Preference number: 4 (lower is better)
Translates to: LCLQRNGTMGKSSTASISLECLA*WYCQWK
Trigger: TTTCCATTGGCAGTACCAGCAAGCCAGACACTCCAG...GCTGATGCTGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTTGCAGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp GGCTCTGCCAGCTCATCTGTCCCACACCGCATGGCCACTTGTGTTGTAGCCTGGTTTAAACATGAAGCTTaGTACTTCCTGTCTCCCTAC +
Preference number: 4 (lower is better)
Translates to: GSASSSVPHRMATCVVAWFKHEA*YFLSPY
Trigger: GTAGGGAGACAGGAAGTAGCAAGCTTCATGTTTAAA...CCAGGCTACAACACAAGTGGCCATGCGGTGTGGGACAGATGAGCTGGCAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp CCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGGGGTATGTCAGTGAGATTGGGAGGGATGTCTaGAAGCTTCCTTCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: PGLHNLELTCLGKGYVSEIGRDV*KLPSLQ
Trigger: CTGAAGGGAAGGAAGCTTGCAGACATCCCTCCCAAT...CTCACTGACATACCCCTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp GGTCCCTCACCTCCTCAAAAACTTCCCATGGTATCCCATTATCTGAAGGCCAAAGCTGTCTTTCAAGGATaGCCCTGTGTGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GPSPPQKLPMVSHYLKAKAVFQG*PCVGLQ
Trigger: CTGCAGCCCCACACAGGGGCATCCTTGAAAGACAGC...TTTGGCCTTCAGATAATGGGATACCATGGGAAGTTTTTGAGGAGGTGAGGGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp GGTCTGGGCAGCACAGGATGGTGTCCACTACAGCCCACATTTGTGCTGCTCAGCTACAGCCCACATTTGTaGTGCTCAGCTCTACTTTTT +
Preference number: 4 (lower is better)
Translates to: GLGSTGWCPLQPTFVLLSYSPHL*CSALLF
Trigger: AAAAAGTAGAGCTGAGCAGCACAAATGTGGGCTGTA...GCTGAGCAGCACAAATGTGGGCTGTAGTGGACACCATCCTGTGCTGCCCAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CCA 90 bp GGTCTGGGCAGCACAGGATGGTGTCCACTACAGCCCACATTTGTGCTGCTCAGCTCAGAGATTCAATCGTaGCCTGCTTGTAAACCTTTC +
Preference number: 4 (lower is better)
Translates to: GLGSTGWCPLQPTFVLLSSEIQS*PACKPF
Trigger: GAAAGGTTTACAAGCAGGCCACGATTGAATCTCTGA...GCTGAGCAGCACAAATGTGGGCTGTAGTGGACACCATCCTGTGCTGCCCAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CGTTCTGTTAGGCAGCACCAGCGCACTGCAGCTAATGAAGCACATTCCTGCAGGACCCTTTCACCATGTTaGGTGATAGCAACCGTATGG +
Preference number: 4 (lower is better)
Translates to: RSVRQHQRTAANEAHSCRTLSPC*VIATVW
Trigger: CCATACGGTTGCTATCACCCAACATGGTGAAAGGGT...CCTGCAGGAATGTGCTTCATTAGCTGCAGTGCGCTGGTGCTGCCTAACAGAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000648983.1
CDS-3UTR CCA 90 bp CTGCTGAGCCCTTTCCTGCTCTGGGCCCCAATCAAAACACAACTTTCTGTGTCACCTAGCTGGAGTGTCTaGCTTGCTGGTACTGCCAAT +
Preference number: 4 (lower is better)
Translates to: LLSPFLLWAPIKTQLSVSPSWSV*LAGTAN
Trigger: ATTGGCAGTACCAGCAAGCCAGACACTCCAGCTAGG...TGACACAGAAAGTTGTGTTTTGATTGGGGCCCAGAGCAGGAAAGGGCTCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp TGTCCCTGCCACATCCCAGACCATTGGCCCCTAAAAATCTCACTGCACCCTGCCGAACATGCAGATGTCTaGGGAAAGAGCATTGCAACT +
Preference number: 4 (lower is better)
Translates to: CPCHIPDHWPLKISLHPAEHADV*GKSIAT
Trigger: AGTTGCAATGCTCTTTCCCCAGACATCTGCATGTTC...GGCAGGGTGCAGTGAGATTTTTAGGGGCCAATGGTCTGGGATGTGGCAGGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp GGTCTGGGCAGCACAGGATGGTGTCCACTACAGCCCACATTTGTGCTGCTCAGCATGAAGCTTACATTCTaGGAGTGGGGAGATAGACAA +
Preference number: 4 (lower is better)
Translates to: GLGSTGWCPLQPTFVLLSMKLTF*EWGDRQ
Trigger: TTGTCTATCTCCCCACTCCCAGAATGTAAGCTTCAT...GCTGAGCAGCACAAATGTGGGCTGTAGTGGACACCATCCTGTGCTGCCCAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CTGCTGAGCCCTTTCCTGCTCTGGGCCCCAATCAAAACACAACTTTCTGTGTCACAGCTTATCGAGTGCTaGGATTACAGGTGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LLSPFLLWAPIKTQLSVSQLIEC*DYRCLP
Trigger: TGGCAGGCACCTGTAATCCCAGCACTCGATAAGCTG...TGACACAGAAAGTTGTGTTTTGATTGGGGCCCAGAGCAGGAAAGGGCTCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp GGTCTGGGCAGCACAGGATGGTGTCCACTACAGCCCACATTTGTGCTGCTCAGCCTCAGCTCTACTTTTTaGTTTAAGTTCTGGTGGACC +
Preference number: 4 (lower is better)
Translates to: GLGSTGWCPLQPTFVLLSLSSTF*FKFWWT
Trigger: GGTCCACCAGAACTTAAACCAAAAAGTAGAGCTGAG...GCTGAGCAGCACAAATGTGGGCTGTAGTGGACACCATCCTGTGCTGCCCAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CCA 90 bp GGCTCTGCCAGCTCATCTGTCCCACACCGCATGGCCACTTGTGTTGTAGCCTGGGTGACAGAGACCATGTaGCTCACAAAGCTTAAAATA +
Preference number: 4 (lower is better)
Translates to: GSASSSVPHRMATCVVAWVTETM*LTKLKI
Trigger: TATTTTAAGCTTTGTGAGCCACATGGTCTCTGTCAC...CCAGGCTACAACACAAGTGGCCATGCGGTGTGGGACAGATGAGCTGGCAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CAAGGTCGCTGCTCCCAGGAAGAGCTCTGCAGGGTGGTGAAATATAGTAGTAACATGAGCACATATGCATaGAGCCCTGCATGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: QGRCSQEELCRVVKYSSNMSTYA*SPAWGQ
Trigger: TTGGCCCCATGCAGGGCTCCATGCATATGTGCTCAT...GTTACTACTATATTTCACCACCCTGCAGAGCTCTTCCTGGGAGCAGCGACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CCA 90 bp CGTTCTGTTAGGCAGCACCAGCGCACTGCAGCTAATGAAGCACATTCCTGCAGGCCCTTAGGCATGAATTaGACTGACCCAGCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: RSVRQHQRTAANEAHSCRPLGMN*TDPAEV
Trigger: AACTTCTGCTGGGTCAGTCCAATTCATGCCTAAGGG...CCTGCAGGAATGTGCTTCATTAGCTGCAGTGCGCTGGTGCTGCCTAACAGAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CCA 90 bp GGACTTAGGAGTTGGACAGGCCACTCTAGAGGTCAATGTGGAGAGGGGACTGGCCTGGCTCAGTCACCTTaGGCAAGTCATTTAACTTCT +
Preference number: 4 (lower is better)
Translates to: GLRSWTGHSRGQCGEGTGLAQSP*ASHLTS
Trigger: AGAAGTTAAATGACTTGCCCAAGGTGACTGAGCCAG...GCCAGTCCCCTCTCCACATTGACCTCTAGAGTGGCCTGTCCAACTCCTAAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR TCA 90 bp CTGCGCCTCCGCTCTGGGTTCCACACCATCTGTCGGTCCACACGCTTGGGATTATTTTCAACCAGTAGGTaGTCCATCTTTAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: LRLRSGFHTICRSTRLGLFSTSR*SIFNSK
Trigger: CTTGGAATTAAAGATGGATCACCTACTGGTTGAAAA...TAATCCCAAGCGTGTGGACCGACAGATGGTGTGGAACCCAGAGCGGAGGCGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR TCA 90 bp GTCATGATAGTGAGTGACTTCTCAAGAGATCCGATGGTTTCAAAGTGTTTGGCAGAGCCGCTCTTCACCTaGGCCCGGATTTCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: VMIVSDFSRDPMVSKCLAEPLFT*ARISAR
Trigger: CCGAGCTGAAATCCGGGCTCAGGTGAAGAGCGGCTC...TGCCAAACACTTTGAAACCATCGGATCTCTTGAGAAGTCACTCACTATCATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CTGAGATGGCCCTTCCAAGTTGTCAAGTTGAGGCAGTGGGGCCAGGCCTTCATAGTAACTTCATCTGACTaGCATGGGGGAAGTTTAGAG +
Preference number: 4 (lower is better)
Translates to: LRWPFQVVKLRQWGQAFIVTSSD*HGGSLE
Trigger: CTCTAAACTTCCCCCATGTCAGTCAGATGAAGTTAC...TATGAAGGCCTGGCCCCACTGCCTCAACTTGACAACTTGGAAGGGCCATCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp ACAGTTGCAAGCTGGCAGCTTCAGGATAGCGCAGTAGATGAAAGGACAAGTGGAGCTGCTGGCTTTGCCTaGCCTTATGACTTGGTGGAT +
Preference number: 4 (lower is better)
Translates to: TVASWQLQDSAVDERTSGAAGFA*PYDLVD
Trigger: ATCCACCAAGTCATAAGGTCAGGCAAAGCCAGCAGC...TCCACTTGTCCTTTCATCTACTGCGCTATCCTGAAGCTGCCAGCTTGCAACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp GGACTTAGGAGTTGGACAGGCCACTCTAGAGGTCAATGTGGAGAGGGGACTGGCGAGCCCAACCCACAGTaGTTTTTAAGAACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: GLRSWTGHSRGQCGEGTGEPNPQ*FLRTVS
Trigger: AGAAACAGTTCTTAAAAATCACTGTGGGTTGGGCTC...GCCAGTCCCCTCTCCACATTGACCTCTAGAGTGGCCTGTCCAACTCCTAAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR GCA 90 bp CCATCACCCAAACTCAAAAGCGTCTTTGAACGGCAGAGACAGGCCCATTTTCCTTCCGAATCCTCTGTCTaGAAAGGAACGGCACCATGG +
Preference number: 4 (lower is better)
Translates to: PSPKLKSVFERQRQAHFPSESSV*KGTAPW
Trigger: CCATGGTGCCGTTCCTTTGCAGACAGAGGATTCGGA...AGGAAAATGGGCCTGTCTCTGCCGTTCAAAGACGCTTTTGAGTTTGGGTGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000648983.1
CDS-3UTR GCA 90 bp CCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGGGGTATGTCAGTGAGTTGCTCTGCCAGGCATaGATCTCAACCACCCAATTA +
Preference number: 4 (lower is better)
Translates to: PGLHNLELTCLGKGYVSELLCQA*ISTTQL
Trigger: TAATTGGGTGGTTGAGATGCATGCCTGGCAGAGCAA...CTCACTGACATACCCCTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp GTTGAGGCAGTGGGGCCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGATTATCTGGGTCTCCTaGCATTTTTCAAACCTGGGA +
Preference number: 4 (lower is better)
Translates to: VEAVGPGLHNLELTCLGKIIWVS*HFSNLG
Trigger: TCCCAGGTTTGAAAAATGGCAGGAGACCCAGATAAT...CTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGGCCCCACTGCCTCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp TGTTCCTTCACCACAGAACACAGTAAATGCATTATCTGGGTCTCCTGCCATTTTGCCCCTGTGTGGGGCTaGAGTGCAGCCACGGTCTTT +
Preference number: 4 (lower is better)
Translates to: CSFTTEHSKCIIWVSCHFAPVWG*SAATVF
Trigger: AAAGACCGTGGCTGCACTGCAGCCCCACACAGGGGC...AAAATGGCAGGAGACCCAGATAATGCATTTACTGTGTTCTGTGGTGAAGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp AAAGTAGACTCTGAGATGGAGATTAGCATGCGGGAAGTTTATCAGGGATTGCTCCCTGGTAGCTGCTGTTaGCGCCCTCCAGACTGCAAC +
Preference number: 4 (lower is better)
Translates to: KVDSEMEISMREVYQGLLPGSCC*RPPDCN
Trigger: GTTGCAGTCTGGAGGGCGCCAACAGCAGCTACCAGG...GAGCAATCCCTGATAAACTTCCCGCATGCTAATCTCCATCTCAGAGTCTACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp ATAGCAACCGTATGGCGCTTCCTAGTGACAGCCAGTGTGCGTTCTGTTAGGCAGAAAGGAACGGCACCATaGGAAAATCTAGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: IATVWRFLVTASVRSVRQKGTAP*ENLAQP
Trigger: TGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTT...CTGCCTAACAGAACGCACACTGGCTGTCACTAGGAAGCGCCATACGGTTGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000648983.1
CDS-3UTR CCA 90 bp CCATCACCCAAACTCAAAAGCGTCTTTGAACGGCAGAGACAGGCCCATTTTCCTTCGCAGGCTCACCCCTaGGATAGAGCAAAGAGAACA +
Preference number: 4 (lower is better)
Translates to: PSPKLKSVFERQRQAHFPSQAHP*DRAKRT
Trigger: TGTTCTCTTTGCTCTATCCCAGGGGTGAGCCTGCGA...AGGAAAATGGGCCTGTCTCTGCCGTTCAAAGACGCTTTTGAGTTTGGGTGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp TGTTCCTTCACCACAGAACACAGTAAATGCATTATCTGGGTCTCCTGCCATTTTGAAGGGGTAGTTGGCTaGCTCTCGCAGGCTCACCCC +
Preference number: 4 (lower is better)
Translates to: CSFTTEHSKCIIWVSCHFEGVVG*LSQAHP
Trigger: GGGGTGAGCCTGCGAGAGCCAGCCAACTACCCCTTC...AAAATGGCAGGAGACCCAGATAATGCATTTACTGTGTTCTGTGGTGAAGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CTGAGAGCACTCCCAGTAGCTGTGGGAAGAGGCCCAGGAAGCATGGTGGCTGGGACCTACTTAATACAATaGGTGAGAGAAGTAAGCAAT +
Preference number: 4 (lower is better)
Translates to: LRALPVAVGRGPGSMVAGTYLIQ*VREVSN
Trigger: ATTGCTTACTTCTCTCACCCATTGTATTAAGTAGGT...CCCAGCCACCATGCTTCCTGGGCCTCTTCCCACAGCTACTGGGAGTGCTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp ATAGCAACCGTATGGCGCTTCCTAGTGACAGCCAGTGTGCGTTCTGTTAGGCAGACCTACCCCACAGAATaGATGCTCAGGAAATGGTTG +
Preference number: 4 (lower is better)
Translates to: IATVWRFLVTASVRSVRQTYPTE*MLRKWL
Trigger: CAACCATTTCCTGAGCATCCATTCTGTGGGGTAGGT...CTGCCTAACAGAACGCACACTGGCTGTCACTAGGAAGCGCCATACGGTTGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp ATAGCAACCGTATGGCGCTTCCTAGTGACAGCCAGTGTGCGTTCTGTTAGGCAGGAGTGTCTGGCTTGCTaGTACTGCCAATGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: IATVWRFLVTASVRSVRQECLAC*YCQWKE
Trigger: TTCTTTCCATTGGCAGTACCAGCAAGCCAGACACTC...CTGCCTAACAGAACGCACACTGGCTGTCACTAGGAAGCGCCATACGGTTGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CTGAGATGGCCCTTCCAAGTTGTCAAGTTGAGGCAGTGGGGCCAGGCCTTCATAGCTTTGTTTTCTGGATaGACTCCCTTCCCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: LRWPFQVVKLRQWGQAFIALFSG*TPFPCN
Trigger: ATTGCAAGGGAAGGGAGTCCATCCAGAAAACAAAGC...TATGAAGGCCTGGCCCCACTGCCTCAACTTGACAACTTGGAAGGGCCATCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CGTTCTGTTAGGCAGCACCAGCGCACTGCAGCTAATGAAGCACATTCCTGCAGGGACCTTATGACTTGGTaGATATGGCAGAATCCAGCT +
Preference number: 4 (lower is better)
Translates to: RSVRQHQRTAANEAHSCRDLMTW*IWQNPA
Trigger: AGCTGGATTCTGCCATATCCACCAAGTCATAAGGTC...CCTGCAGGAATGTGCTTCATTAGCTGCAGTGCGCTGGTGCTGCCTAACAGAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp GGTACATGGATGGAGCATATTCCTAGGTGTGGGATATGCTGTCTCCAAAACCTACTATCTTCTGCCCTCTaGCCCTGCTATGCCCAACCC +
Preference number: 4 (lower is better)
Translates to: GTWMEHIPRCGICCLQNLLSSAL*PCYAQP
Trigger: GGGTTGGGCATAGCAGGGCCAGAGGGCAGAAGATAG...TAGGTTTTGGAGACAGCATATCCCACACCTAGGAATATGCTCCATCCATGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp TGTCCCTGCCACATCCCAGACCATTGGCCCCTAAAAATCTCACTGCACCCTGCCGTATGTGCTCTCTGGTaGGTGTTTACATGGAATACA +
Preference number: 4 (lower is better)
Translates to: CPCHIPDHWPLKISLHPAVCALW*VFTWNT
Trigger: TGTATTCCATGTAAACACCCACCAGAGAGCACATAC...GGCAGGGTGCAGTGAGATTTTTAGGGGCCAATGGTCTGGGATGTGGCAGGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CTGAGATGGCCCTTCCAAGTTGTCAAGTTGAGGCAGTGGGGCCAGGCCTTCATAAGTTCAAAACTAGTCTaGCCAACATGGCGAAACTCC +
Preference number: 4 (lower is better)
Translates to: LRWPFQVVKLRQWGQAFISSKLV*PTWRNS
Trigger: GGAGTTTCGCCATGTTGGCCAGACTAGTTTTGAACT...TATGAAGGCCTGGCCCCACTGCCTCAACTTGACAACTTGGAAGGGCCATCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CCA 90 bp CCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGGGGTATGTCAGTGAGGTGGACCTCCTTTCCTaGGGGAAACTTAGGAAAGTA +
Preference number: 4 (lower is better)
Translates to: PGLHNLELTCLGKGYVSEVDLLS*GKLRKV
Trigger: TACTTTCCTAAGTTTCCCCCAGGAAAGGAGGTCCAC...CTCACTGACATACCCCTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CCA 90 bp GTTGAGGCAGTGGGGCCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGCTCAGCTCTACTTTTTaGTTTAAGTTCTGGTGGACC +
Preference number: 4 (lower is better)
Translates to: VEAVGPGLHNLELTCLGKLSSTF*FKFWWT
Trigger: GGTCCACCAGAACTTAAACCAAAAAGTAGAGCTGAG...CTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGGCCCCACTGCCTCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
3UTR CAA 72 bp ACTACTACACCACCATGGTTGCTGTTTATACACCCATaGTGTCAGCTCTGGGGTGGCCTCAGAGACTGGTTG +
Preference number: 4 (lower is better)
Translates to: TTTPPWLLFIHP*CQLWGGLRDWL
Trigger: CAACCAGTCTCTGAGGCCACCCCAGAGCTGACACAATGGGTGTATAAACAGCAACCATGGTGGTGTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CAA 72 bp CTGTATGAAGACCTCAGCCAGTCTCATGGGAGGGTCTaGAAGCTGAGATGGCCCTTCCAAGTTGTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: LYEDLSQSHGRV*KLRWPFQVVKL
Trigger: CAACTTGACAACTTGGAAGGGCCATCTCAGCTTCAAGACCCTCCCATGAGACTGGCTGAGGTCTTCATACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR TCA 90 bp GGTCCCTCACCTCCTCAAAAACTTCCCATGGTATCCCATTATCTGAAGGCCAAATCTAGGCTGACTCCTTaGGTTCCTAGCTGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: GPSPPQKLPMVSHYLKAKSRLTP*VPSWSV
Trigger: GACACTCCAGCTAGGAACTCAAGGAGTCAGCCTAGA...TTTGGCCTTCAGATAATGGGATACCATGGGAAGTTTTTGAGGAGGTGAGGGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp GGTCCCTCACCTCCTCAAAAACTTCCCATGGTATCCCATTATCTGAAGGCCAAATCTTTGAGACTGAGGTaGGTCTTGCTCTGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: GPSPPQKLPMVSHYLKAKSLRLR*VLLCRP
Trigger: TGGGCGACAGAGCAAGACTCACCTCAGTCTCAAAGA...TTTGGCCTTCAGATAATGGGATACCATGGGAAGTTTTTGAGGAGGTGAGGGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp GTCATGATAGTGAGTGACTTCTCAAGAGATCCGATGGTTTCAAAGTGTTTGGCATGGCGCCCTCCAGACTaGAACCTCGTAGGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: VMIVSDFSRDPMVSKCLAWRPPD*NLVGSQ
Trigger: TTGGGAGCCTACGAGGTTGCAGTCTGGAGGGCGCCA...TGCCAAACACTTTGAAACCATCGGATCTCTTGAGAAGTCACTCACTATCATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp AACACAGCTTTACCTTATCCACTTGCCTGGGATGGTACTTATGCTAATCCTATTAGCAGCCCTGGTAGCTaGTGTTGGCGCCCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: NTALPYPLAWDGTYANPISSPGS*CWRPPD
Trigger: GTCTGGAGGGCGCCAACAGCAGCTACCAGGGCTGCT...AATAGGATTAGCATAAGTACCATCCCAGGCAAGTGGATAAGGTAAAGCTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR GCA 90 bp ACAGTTGCAAGCTGGCAGCTTCAGGATAGCGCAGTAGATGAAAGGACAAGTGGATCAAGAGAATGTCCCTaGCACATCCCAGACCATTGG +
Preference number: 4 (lower is better)
Translates to: TVASWQLQDSAVDERTSGSRECP*HIPDHW
Trigger: CCAATGGTCTGGGATGTGGCAGGGACATTCTCTTGA...TCCACTTGTCCTTTCATCTACTGCGCTATCCTGAAGCTGCCAGCTTGCAACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp CGTTCTGTTAGGCAGCACCAGCGCACTGCAGCTAATGAAGCACATTCCTGCAGGTTTACCTTATCCACTTaGCTGGGATGGTACTTATGC +
Preference number: 4 (lower is better)
Translates to: RSVRQHQRTAANEAHSCRFTLST*LGWYLC
Trigger: GCATAAGTACCATCCCAGGCAAGTGGATAAGGTAAA...CCTGCAGGAATGTGCTTCATTAGCTGCAGTGCGCTGGTGCTGCCTAACAGAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CCA 90 bp CCAGTAAAAAGCTTTCTGCCCGGTGTGGGAAGGTTGGACTTAGGAGTTGGACAGAAAGGAACGGCACCATaGGAAAATCTAGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: PVKSFLPGVGRLDLGVGQKGTAP*ENLAQP
Trigger: TGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTT...CTGTCCAACTCCTAAGTCCAACCTTCCCACACCGGGCAGAAAGCTTTTTACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CCA 90 bp GGTCCCTCACCTCCTCAAAAACTTCCCATGGTATCCCATTATCTGAAGGCCAAAGTGATAGCAACCGTATaGCGCTTCCTAGTGACAGCC +
Preference number: 4 (lower is better)
Translates to: GPSPPQKLPMVSHYLKAKVIATV*RFLVTA
Trigger: GGCTGTCACTAGGAAGCGCCATACGGTTGCTATCAC...TTTGGCCTTCAGATAATGGGATACCATGGGAAGTTTTTGAGGAGGTGAGGGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp GAGAGGCACCAGAGCTATCTAAACTCAGGGGGATGGAACCGAGTGAGCGGCAGCGCATTAAAGAATAGTTaGGAGGGAGTGCTATTGTAT +
Preference number: 4 (lower is better)
Translates to: ERHQSYLNSGGWNRVSGSALKNS*EGVLLY
Trigger: ATACAATAGCACTCCCTCCCAACTATTCTTTAATGC...GCTGCCGCTCACTCGGTTCCATCCCCCTGAGTTTAGATAGCTCTGGTGCCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp GTTGAGGCAGTGGGGCCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGGTGACAGAGACCATGTaGCTCACAAAGCTTAAAATA +
Preference number: 4 (lower is better)
Translates to: VEAVGPGLHNLELTCLGKVTETM*LTKLKI
Trigger: TATTTTAAGCTTTGTGAGCCACATGGTCTCTGTCAC...CTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGGCCCCACTGCCTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CCA 90 bp CCCGGGAGCAACGGGGCCAGTAAAAAGCTTTCTGCCCGGTGTGGGAAGGTTGGAAGAACTGTTTCTTTGTaGAAAATGACTCCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: PGSNGASKKLSARCGKVGRTVSL*KMTPSK
Trigger: TTTGGAAGGAGTCATTTTCCACAAAGAAACAGTTCT...TCCAACCTTCCCACACCGGGCAGAAAGCTTTTTACTGGCCCCGTTGCTCCCGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR CAA 72 bp GATCCGATGGTTTCAAAGTGTTTGGCAGTTCCCCCTTaGCACTCTCTCTCTCCCCTGCTGTCTTGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: DPMVSKCLAVPP*HSLSPLLSCEE
Trigger: TTCTTCACAAGACAGCAGGGGAGAGAGAGAGTGCAAAGGGGGAACTGCCAAACACTTTGAAACCATCGGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CAA 72 bp TGTTCTCAAGGGATGGAGCTATATCTAGGTTCAGAGTaGGTCTCTGTTACTGGCAGGCCGAACACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: CSQGMELYLGSE*VSVTGRPNTQQ
Trigger: CTGCTGAGTGTTCGGCCTGCCAGTAACAGAGACCAACTCTGAACCTAGATATAGCTCCATCCCTTGAGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp ATAGCAACCGTATGGCGCTTCCTAGTGACAGCCAGTGTGCGTTCTGTTAGGCAGAGTAGTAACTTCATCTaGCTGACATGGGGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: IATVWRFLVTASVRSVRQSSNFI*LTWGKF
Trigger: AAACTTCCCCCATGTCAGTCAGATGAAGTTACTACT...CTGCCTAACAGAACGCACACTGGCTGTCACTAGGAAGCGCCATACGGTTGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000648983.1
CDS-3UTR TCA 90 bp TGTCCCTGCCACATCCCAGACCATTGGCCCCTAAAAATCTCACTGCACCCTGCCCTATTAACACAAAAGTaGCCAGTTCCTGCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: CPCHIPDHWPLKISLHPALLTQK*PVPASN
Trigger: ATTTGAAGCAGGAACTGGTCACTTTTGTGTTAATAG...GGCAGGGTGCAGTGAGATTTTTAGGGGCCAATGGTCTGGGATGTGGCAGGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CCATCACCCAAACTCAAAAGCGTCTTTGAACGGCAGAGACAGGCCCATTTTCCTGATCTTCTTGGATCTTaGAACCAACCTCCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: PSPKLKSVFERQRQAHFPDLLGS*NQPPQV
Trigger: AACCTGGGGAGGTTGGTTTCAAGATCCAAGAAGATC...AGGAAAATGGGCCTGTCTCTGCCGTTCAAAGACGCTTTTGAGTTTGGGTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp GGTCCCTCACCTCCTCAAAAACTTCCCATGGTATCCCATTATCTGAAGGCCAAAGGCTCCCAGGCATTGTaGTTCCTTCTTAATGGTTGG +
Preference number: 4 (lower is better)
Translates to: GPSPPQKLPMVSHYLKAKGSQAL*FLLNGW
Trigger: CCAACCATTAAGAAGGAAGCACAATGCCTGGGAGCC...TTTGGCCTTCAGATAATGGGATACCATGGGAAGTTTTTGAGGAGGTGAGGGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp GGTCCCTCACCTCCTCAAAAACTTCCCATGGTATCCCATTATCTGAAGGCCAAATGCCAGTCTAGTCCTTaGCACACAGAAGATGGGCAA +
Preference number: 4 (lower is better)
Translates to: GPSPPQKLPMVSHYLKAKCQSSP*HTEDGQ
Trigger: TTGCCCATCTTCTGTGTGCCAAGGACTAGACTGGCA...TTTGGCCTTCAGATAATGGGATACCATGGGAAGTTTTTGAGGAGGTGAGGGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp ATAGCAACCGTATGGCGCTTCCTAGTGACAGCCAGTGTGCGTTCTGTTAGGCAGCTATCCTTCTGGCTTTaGTTCAAACATGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: IATVWRFLVTASVRSVRQLSFWL*FKHELL
Trigger: GAGGAGTTCATGTTTGAACCAAAGCCAGAAGGATAG...CTGCCTAACAGAACGCACACTGGCTGTCACTAGGAAGCGCCATACGGTTGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp GGTCCCTCACCTCCTCAAAAACTTCCCATGGTATCCCATTATCTGAAGGCCAAAATTCTTGGCTACAGATaGCATGGCCCTGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GPSPPQKLPMVSHYLKAKILGYR*HGPAPE
Trigger: TTCTGGAGCAGGGCCATGCCATCTGTAGCCAAGAAT...TTTGGCCTTCAGATAATGGGATACCATGGGAAGTTTTTGAGGAGGTGAGGGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp AAAGTAGACTCTGAGATGGAGATTAGCATGCGGGAAGTTTATCAGGGATTGCTCCCTCAGCCAGTCTCATaGGAGGGTCTTGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: KVDSEMEISMREVYQGLLPQPVS*EGLEAE
Trigger: CTCAGCTTCAAGACCCTCCCATGAGACTGGCTGAGG...GAGCAATCCCTGATAAACTTCCCGCATGCTAATCTCCATCTCAGAGTCTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CCA 90 bp TCACATCTTCATCTTCATCATCATCAAGTGTTTAGGCCTCACCCGGGAGCAACGGTTGGACTTAGGAGTTaGACAGGCCACTCTAGAGGT +
Preference number: 4 (lower is better)
Translates to: SHLHLHHHQVFRPHPGATVGLRS*TGHSRG
Trigger: ACCTCTAGAGTGGCCTGTCCAACTCCTAAGTCCAAC...CGTTGCTCCCGGGTGAGGCCTAAACACTTGATGATGATGAAGATGAAGATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
3UTR CAA 72 bp CCATTGTGTCAGCTCTGGGGTGGCCTCAGAGACTGGTaGATGTCAACTGTGTGTACATTGTTGTTTAGTGCT +
Preference number: 4 (lower is better)
Translates to: PLCQLWGGLRDW*MSTVCTLLFSA
Trigger: AGCACTAAACAACAATGTACACACAGTTGACATCAACCAGTCTCTGAGGCCACCCCAGAGCTGACACAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CAA 72 bp TGGGCAGCACAGGATGGTGTCCACTACAGCCCACATTaGTGCTGCTCAGCTCTACTTTTTGGTTTAAGTTCT +
Preference number: 4 (lower is better)
Translates to: WAAQDGVHYSPH*CCSALLFGLSS
Trigger: AGAACTTAAACCAAAAAGTAGAGCTGAGCAGCACAAATGTGGGCTGTAGTGGACACCATCCTGTGCTGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR TCA 90 bp GCCACCATGCCTGGCTATTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTGGACTCCGACTACCTTaGCGTGCTTGCAGCGTGTTC +
Preference number: 4 (lower is better)
Translates to: ATMPGYLLLLLLLLLLLFGLRLP*RACSVF
Trigger: GAACACGCTGCAAGCACGTCAAGGTAGTCGGAGTCC...AAACAACAACAACAACAACAACAACAACAACAACAAATAGCCAGGCATGGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR TCA 90 bp CTCTGTCTGCAAAGGAACGGCACCATGGGAAAATCTAGCACAGCCAGCATCAGCTTACCTGCAGGGTGGTaGAATATAGTAGTAACTTCA +
Preference number: 4 (lower is better)
Translates to: LCLQRNGTMGKSSTASISLPAGW*NIVVTS
Trigger: TGAAGTTACTACTATATTTCACCACCCTGCAGGTAA...GCTGATGCTGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTTGCAGACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp GTCATGATAGTGAGTGACTTCTCAAGAGATCCGATGGTTTCAAAGTGTTTGGCACAGACAGGGGAGTTCTaGGAGGCACCAGAGCTATCT +
Preference number: 4 (lower is better)
Translates to: VMIVSDFSRDPMVSKCLAQTGEF*EAPELS
Trigger: AGATAGCTCTGGTGCCTCTCAGAACTCCCCTGTCTG...TGCCAAACACTTTGAAACCATCGGATCTCTTGAGAAGTCACTCACTATCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CTCCACGTGAATCAACTGAGTACCAAAGATATACCTCCCTTCCCTCCATTGCTTTATTCAAATAAACCCTaGGGTGTGGGAGGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: LHVNQLSTKDIPPFPPLLYSNKP*GVGGFG
Trigger: CCCGAAGCCTCCCACACCTCAGGGTTTATTTGAATA...AAGCAATGGAGGGAAGGGAGGTATATCTTTGGTACTCAGTTGATTCACGTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp ATAGCAACCGTATGGCGCTTCCTAGTGACAGCCAGTGTGCGTTCTGTTAGGCAGCTGTCATTCACTATCTaGGTGACCTTGAGTAAGTTA +
Preference number: 4 (lower is better)
Translates to: IATVWRFLVTASVRSVRQLSFTI*VTLSKL
Trigger: TAACTTACTCAAGGTCACGCAGATAGTGAATGACAG...CTGCCTAACAGAACGCACACTGGCTGTCACTAGGAAGCGCCATACGGTTGCTAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp GGTCCCTCACCTCCTCAAAAACTTCCCATGGTATCCCATTATCTGAAGGCCAAAATAGGCATGAACCAATaGACCCGGCCTCAACCTTTT +
Preference number: 4 (lower is better)
Translates to: GPSPPQKLPMVSHYLKAKIGMNQ*TRPQPF
Trigger: AAAAGGTTGAGGCCGGGTGCATTGGTTCATGCCTAT...TTTGGCCTTCAGATAATGGGATACCATGGGAAGTTTTTGAGGAGGTGAGGGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp AAAGTAGACTCTGAGATGGAGATTAGCATGCGGGAAGTTTATCAGGGATTGCTCCCTCAGCTTATCGAGTaGTGGGATTACAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: KVDSEMEISMREVYQGLLPQLIE*WDYRCL
Trigger: CAGGCACCTGTAATCCCAGCACTCGATAAGCTGAGG...GAGCAATCCCTGATAAACTTCCCGCATGCTAATCTCCATCTCAGAGTCTACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp GGTCCCTCACCTCCTCAAAAACTTCCCATGGTATCCCATTATCTGAAGGCCAAACTTCTCCATGGTATGTaGTCTCTGGTGGGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: GPSPPQKLPMVSHYLKAKLLHGM*SLVGVY
Trigger: GTAAACACCCACCAGAGAGCACATACCATGGAGAAG...TTTGGCCTTCAGATAATGGGATACCATGGGAAGTTTTTGAGGAGGTGAGGGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp AAAGTAGACTCTGAGATGGAGATTAGCATGCGGGAAGTTTATCAGGGATTGCTCCTGAGGCAGGTGGACTaGTTGAGGCCAGAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: KVDSEMEISMREVYQGLLLRQVD*LRPEVQ
Trigger: TTGAACTTCTGGCCTCAAGCAGTCCACCTGCCTCAG...GAGCAATCCCTGATAAACTTCCCGCATGCTAATCTCCATCTCAGAGTCTACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR GCA 90 bp AAAAACTGGAAGAGCTATGTTATAGGCCCACTTCCTTGGAAAGTAGACTCTGAGGAAGTCAGCATATCCTaGTCAGGTCACGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: KNWKSYVIGPLPWKVDSEEVSIS*SGHGLG
Trigger: GCCCAGACCGTGACCTGAGCAGGATATGCTGACTTC...CTCAGAGTCTACTTTCCAAGGAAGTGGGCCTATAACATAGCTCTTCCAGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR GCA 90 bp CGTTCTGTTAGGCAGCACCAGCGCACTGCAGCTAATGAAGCACATTCCTGCAGGCATACTGTCCACAGCTaGTTTTGTATTACAATAGCA +
Preference number: 4 (lower is better)
Translates to: RSVRQHQRTAANEAHSCRHTVHS*FCITIA
Trigger: TGCTATTGTAATACAAAAGCAGCTGTGGACAGTATG...CCTGCAGGAATGTGCTTCATTAGCTGCAGTGCGCTGGTGCTGCCTAACAGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp CTCTGTCTGCAAAGGAACGGCACCATGGGAAAATCTAGCACAGCCAGCATCAGCCTTCCAAAAGTTAAATaGTCCTTCATGGAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LCLQRNGTMGKSSTASISLPKVK*SFMELK
Trigger: CTTCAGCTCCATGAAGGAGCATTTAACTTTTGGAAG...GCTGATGCTGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTTGCAGACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CCA 90 bp CTGAGATGGCCCTTCCAAGTTGTCAAGTTGAGGCAGTGGGGCCAGGCCTTCATATGCTGGTACTGCCAATaGAAAGAAGACATGTTATAT +
Preference number: 4 (lower is better)
Translates to: LRWPFQVVKLRQWGQAFICWYCQ*KEDMLY
Trigger: ATATAACATGTCTTCTTTCCATTGGCAGTACCAGCA...TATGAAGGCCTGGCCCCACTGCCTCAACTTGACAACTTGGAAGGGCCATCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp ACAGTTGCAAGCTGGCAGCTTCAGGATAGCGCAGTAGATGAAAGGACAAGTGGACCTGACCTTATGACTTaGTGGATATGGCAGAATCCA +
Preference number: 4 (lower is better)
Translates to: TVASWQLQDSAVDERTSGPDLMT*WIWQNP
Trigger: TGGATTCTGCCATATCCACCAAGTCATAAGGTCAGG...TCCACTTGTCCTTTCATCTACTGCGCTATCCTGAAGCTGCCAGCTTGCAACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CCATCACCCAAACTCAAAAGCGTCTTTGAACGGCAGAGACAGGCCCATTTTCCTTGGTTTCAAAGTGTTTaGCAGTTCCCCCTTTGCACT +
Preference number: 4 (lower is better)
Translates to: PSPKLKSVFERQRQAHFPWFQSV*QFPLCT
Trigger: AGTGCAAAGGGGGAACTGCCAAACACTTTGAAACCA...AGGAAAATGGGCCTGTCTCTGCCGTTCAAAGACGCTTTTGAGTTTGGGTGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CTGAGATGGCCCTTCCAAGTTGTCAAGTTGAGGCAGTGGGGCCAGGCCTTCATACTTAGGAAAGTAAGTTaGACAAACTACAACCTCCAT +
Preference number: 4 (lower is better)
Translates to: LRWPFQVVKLRQWGQAFILRKVS*TNYNLH
Trigger: ATGGAGGTTGTAGTTTGTCCAACTTACTTTCCTAAG...TATGAAGGCCTGGCCCCACTGCCTCAACTTGACAACTTGGAAGGGCCATCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CCA 90 bp ACATTTGTGCTGCTCAGCTCTACTTTTTGGTTTAAGTTCTGGTGGACCTCCTTTGTCAAGTTGAGGCAGTaGGGCCAGGCCTTCATAACC +
Preference number: 4 (lower is better)
Translates to: TFVLLSSTFWFKFWWTSFVKLRQ*GQAFIT
Trigger: GGTTATGAAGGCCTGGCCCCACTGCCTCAACTTGAC...AAAGGAGGTCCACCAGAACTTAAACCAAAAAGTAGAGCTGAGCAGCACAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR TCA 90 bp ACAGTTGCAAGCTGGCAGCTTCAGGATAGCGCAGTAGATGAAAGGACAAGTGGACCAGAATCTTTCTTCTaGGGGCTATTCTGGATTCTA +
Preference number: 4 (lower is better)
Translates to: TVASWQLQDSAVDERTSGPESFF*GLFWIL
Trigger: TAGAATCCAGAATAGCCCTCAGAAGAAAGATTCTGG...TCCACTTGTCCTTTCATCTACTGCGCTATCCTGAAGCTGCCAGCTTGCAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CTCTGTCTGCAAAGGAACGGCACCATGGGAAAATCTAGCACAGCCAGCATCAGCATCTTGTTCACAGTGTaGCCTATCCTTGTTGATTTT +
Preference number: 4 (lower is better)
Translates to: LCLQRNGTMGKSSTASISILFTV*PILVDF
Trigger: AAAATCAACAAGGATAGGTCACACTGTGAACAAGAT...GCTGATGCTGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTTGCAGACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000648983.1
CDS-3UTR TCA 90 bp ACATTTGTGCTGCTCAGCTCTACTTTTTGGTTTAAGTTCTGGTGGACCTCCTTTACTCAAAAGCGTCTTTaGACGGCAGAGACAGGCCCA +
Preference number: 4 (lower is better)
Translates to: TFVLLSSTFWFKFWWTSFTQKRL*TAETGP
Trigger: TGGGCCTGTCTCTGCCGTTCAAAGACGCTTTTGAGT...AAAGGAGGTCCACCAGAACTTAAACCAAAAAGTAGAGCTGAGCAGCACAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp AGGCTTTCAGCCAGAGAGCAATTTGTTTTCAACTTACTCTGGGTTCCTAAGTTATGGGCAGTAACAAACTaGGCCTTTGCCCCATCTGGC +
Preference number: 4 (lower is better)
Translates to: RLSAREQFVFNLLWVPKLWAVTN*AFAPSG
Trigger: GCCAGATGGGGCAAAGGCTCAGTTTGTTACTGCCCA...TAACTTAGGAACCCAGAGTAAGTTGAAAACAAATTGCTCTCTGGCTGAAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp AAAGTAGACTCTGAGATGGAGATTAGCATGCGGGAAGTTTATCAGGGATTGCTCAGGTCAAAGCTGCAGTaGGCTGTAATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: KVDSEMEISMREVYQGLLRSKLQ*AVIAPL
Trigger: CAGTGGTGCAATTACAGCTCACTGCAGCTTTGACCT...GAGCAATCCCTGATAAACTTCCCGCATGCTAATCTCCATCTCAGAGTCTACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CCATCACCCAAACTCAAAAGCGTCTTTGAACGGCAGAGACAGGCCCATTTTCCTTTACATGGAATACAATaGTCTTCACACTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PSPKLKSVFERQRQAHFPLHGIQ*SSHLVP
Trigger: GGGCACCAAGTGTGAAGATCATTGTATTCCATGTAA...AGGAAAATGGGCCTGTCTCTGCCGTTCAAAGACGCTTTTGAGTTTGGGTGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp ATAGCAACCGTATGGCGCTTCCTAGTGACAGCCAGTGTGCGTTCTGTTAGGCAGAGCCATGTAGAAATTTaGGTCAATGAAACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: IATVWRFLVTASVRSVRQSHVEI*VNETSF
Trigger: GAAAGAGGTTTCATTGACTCAAATTTCTACATGGCT...CTGCCTAACAGAACGCACACTGGCTGTCACTAGGAAGCGCCATACGGTTGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp AAAAACTGGAAGAGCTATGTTATAGGCCCACTTCCTTGGAAAGTAGACTCTGAGGGCAGGTGGACTGCTTaGGGCCAGAAGTTCAAAACT +
Preference number: 4 (lower is better)
Translates to: KNWKSYVIGPLPWKVDSEGRWTA*GQKFKT
Trigger: AGTTTTGAACTTCTGGCCTCAAGCAGTCCACCTGCC...CTCAGAGTCTACTTTCCAAGGAAGTGGGCCTATAACATAGCTCTTCCAGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR TCA 90 bp TCACATCTTCATCTTCATCATCATCAAGTGTTTAGGCCTCACCCGGGAGCAACGGCTCCTTCATGGAGCTaGAGAGAAAGTGAAGAGATT +
Preference number: 4 (lower is better)
Translates to: SHLHLHHHQVFRPHPGATAPSWS*RESEEI
Trigger: AATCTCTTCACTTTCTCTTCAGCTCCATGAAGGAGC...CGTTGCTCCCGGGTGAGGCCTAAACACTTGATGATGATGAAGATGAAGATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR GCA 90 bp AAAGTAGACTCTGAGATGGAGATTAGCATGCGGGAAGTTTATCAGGGATTGCTCGGGATTACAGGTGCCTaGCACCAGATCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: KVDSEMEISMREVYQGLLGITGA*HQIWLI
Trigger: AATTAGCCAGATCTGGTGGCAGGCACCTGTAATCCC...GAGCAATCCCTGATAAACTTCCCGCATGCTAATCTCCATCTCAGAGTCTACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp CCATCACCCAAACTCAAAAGCGTCTTTGAACGGCAGAGACAGGCCCATTTTCCTTATCTTAGGAATTGCTaGTGGCTTTGCCTGACCTTA +
Preference number: 4 (lower is better)
Translates to: PSPKLKSVFERQRQAHFPYLRNC*WLCLTL
Trigger: TAAGGTCAGGCAAAGCCAGCAGCAATTCCTAAGATA...AGGAAAATGGGCCTGTCTCTGCCGTTCAAAGACGCTTTTGAGTTTGGGTGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp AGGCTTTCAGCCAGAGAGCAATTTGTTTTCAACTTACTCTGGGTTCCTAAGTTAATAAACCCTGAGGTGTaGGAGGCTTCGGGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: RLSAREQFVFNLLWVPKLINPEV*EASGQF
Trigger: GAACTGGCCCGAAGCCTCCCACACCTCAGGGTTTAT...TAACTTAGGAACCCAGAGTAAGTTGAAAACAAATTGCTCTCTGGCTGAAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CTCTGTCTGCAAAGGAACGGCACCATGGGAAAATCTAGCACAGCCAGCATCAGCAAAGAGCATTGCAACTaGAACAGCAAATGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: LCLQRNGTMGKSSTASISKEHCN*NSKCKE
Trigger: TTCTTTGCATTTGCTGTTCCAGTTGCAATGCTCTTT...GCTGATGCTGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTTGCAGACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp ATAGCAACCGTATGGCGCTTCCTAGTGACAGCCAGTGTGCGTTCTGTTAGGCAGGTTTTCAACTTACTCTaGGTTCCTAAGTTAGCAGAA +
Preference number: 4 (lower is better)
Translates to: IATVWRFLVTASVRSVRQVFNLL*VPKLAE
Trigger: TTCTGCTAACTTAGGAACCCAGAGTAAGTTGAAAAC...CTGCCTAACAGAACGCACACTGGCTGTCACTAGGAAGCGCCATACGGTTGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CTGCTGAGCCCTTTCCTGCTCTGGGCCCCAATCAAAACACAACTTTCTGTGTCATTGTGTTTTCAAAAATaGTCTGGGCAAGGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: LLSPFLLWAPIKTQLSVSLCFQK*SGQGKV
Trigger: CACTTTGCCTTGCCCAGACCATTTTTGAAAACACAA...TGACACAGAAAGTTGTGTTTTGATTGGGGCCCAGAGCAGGAAAGGGCTCAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGGGGTATGTCAGTGAGTGGTGGGTGTTTACATaGAATACAATGATCTTCACA +
Preference number: 4 (lower is better)
Translates to: PGLHNLELTCLGKGYVSEWWVFT*NTMIFT
Trigger: TGTGAAGATCATTGTATTCCATGTAAACACCCACCA...CTCACTGACATACCCCTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGGGGTATGTCAGTGAGCTTAGGAAAGTAAGTTaGACAAACTACAACCTCCAT +
Preference number: 4 (lower is better)
Translates to: PGLHNLELTCLGKGYVSELRKVS*TNYNLH
Trigger: ATGGAGGTTGTAGTTTGTCCAACTTACTTTCCTAAG...CTCACTGACATACCCCTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CCA 90 bp AGGCTTTCAGCCAGAGAGCAATTTGTTTTCAACTTACTCTGGGTTCCTAAGTTAGTCAAGTTGAGGCAGTaGGGCCAGGCCTTCATAACC +
Preference number: 4 (lower is better)
Translates to: RLSAREQFVFNLLWVPKLVKLRQ*GQAFIT
Trigger: GGTTATGAAGGCCTGGCCCCACTGCCTCAACTTGAC...TAACTTAGGAACCCAGAGTAAGTTGAAAACAAATTGCTCTCTGGCTGAAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp ACATTTGTGCTGCTCAGCTCTACTTTTTGGTTTAAGTTCTGGTGGACCTCCTTTATCAGGGATTGCTCTTaGGAAGGGGGCAGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: TFVLLSSTFWFKFWWTSFIRDCS*EGGRKG
Trigger: TCCTTTCCTGCCCCCTTCCCAAGAGCAATCCCTGAT...AAAGGAGGTCCACCAGAACTTAAACCAAAAAGTAGAGCTGAGCAGCACAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR TCA 90 bp AGGCTTTCAGCCAGAGAGCAATTTGTTTTCAACTTACTCTGGGTTCCTAAGTTAATGTGGGGTCTAGGCTaGCTCCTTGAGTTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: RLSAREQFVFNLLWVPKLMWGLG*LLEFLA
Trigger: AGCTAGGAACTCAAGGAGTCAGCCTAGACCCCACAT...TAACTTAGGAACCCAGAGTAAGTTGAAAACAAATTGCTCTCTGGCTGAAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp TGTTCCTTCACCACAGAACACAGTAAATGCATTATCTGGGTCTCCTGCCATTTTGACAGAGTGAGACCCTaGCCCCCTCCCAAAATAAAA +
Preference number: 4 (lower is better)
Translates to: CSFTTEHSKCIIWVSCHFDRVRP*PPPKIK
Trigger: TTTTATTTTGGGAGGGGGTCAGGGTCTCACTCTGTC...AAAATGGCAGGAGACCCAGATAATGCATTTACTGTGTTCTGTGGTGAAGGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp AACACAGCTTTACCTTATCCACTTGCCTGGGATGGTACTTATGCTAATCCTATTAGGCATGAATTGGACTaGCCCAGCAGAAGTTTGGCC +
Preference number: 4 (lower is better)
Translates to: NTALPYPLAWDGTYANPIRHELD*PSRSLA
Trigger: GGCCAAACTTCTGCTGGGTCAGTCCAATTCATGCCT...AATAGGATTAGCATAAGTACCATCCCAGGCAAGTGGATAAGGTAAAGCTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR TCA 90 bp CCACCATGCCTGGCTATTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTACAGGTGTGAGCCAGTaGGCCCAACCCACAGTGATT +
Preference number: 4 (lower is better)
Translates to: PPCLAICCCCCCCCCCCFTGVSQ*AQPTVI
Trigger: AATCACTGTGGGTTGGGCTCACTGGCTCACACCTGT...AAAACAACAACAACAACAACAACAACAACAACAACAAATAGCCAGGCATGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR GCA 90 bp ACATTTGTGCTGCTCAGCTCTACTTTTTGGTTTAAGTTCTGGTGGACCTCCTTTATACTCTGCTTGCTCTaGCAGGCATGCATCTCAACC +
Preference number: 4 (lower is better)
Translates to: TFVLLSSTFWFKFWWTSFILCLL*QACIST
Trigger: GGTTGAGATGCATGCCTGGCAGAGCAAGCAGAGTAT...AAAGGAGGTCCACCAGAACTTAAACCAAAAAGTAGAGCTGAGCAGCACAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp AAAAACTGGAAGAGCTATGTTATAGGCCCACTTCCTTGGAAAGTAGACTCTGAGGGTTTTTCCATACTCTaGTTGCTCTGCCAGGCATGC +
Preference number: 4 (lower is better)
Translates to: KNWKSYVIGPLPWKVDSEGFSIL*LLCQAC
Trigger: GCATGCCTGGCAGAGCAAGCAGAGTATGGAAAAACC...CTCAGAGTCTACTTTCCAAGGAAGTGGGCCTATAACATAGCTCTTCCAGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp AGGCTTTCAGCCAGAGAGCAATTTGTTTTCAACTTACTCTGGGTTCCTAAGTTAAGGTGTGAGCTACCATaGCCAACCAGGACCTCCAAA +
Preference number: 4 (lower is better)
Translates to: RLSAREQFVFNLLWVPKLRCELP*PTRTSK
Trigger: TTTGGAGGTCCTGGTTGGGCATGGTAGCTCACACCT...TAACTTAGGAACCCAGAGTAAGTTGAAAACAAATTGCTCTCTGGCTGAAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp GGTCCCTCACCTCCTCAAAAACTTCCCATGGTATCCCATTATCTGAAGGCCAAACTACACCACCATGGTTaGTGTTTATACACCCATTGT +
Preference number: 4 (lower is better)
Translates to: GPSPPQKLPMVSHYLKAKLHHHG*CLYTHC
Trigger: ACAATGGGTGTATAAACAGCAACCATGGTGGTGTAG...TTTGGCCTTCAGATAATGGGATACCATGGGAAGTTTTTGAGGAGGTGAGGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp AAAAACTGGAAGAGCTATGTTATAGGCCCACTTCCTTGGAAAGTAGACTCTGAGCTCCCTTCCCTCCATTaGTTAACAGCAGCTGTACCT +
Preference number: 4 (lower is better)
Translates to: KNWKSYVIGPLPWKVDSELPSLH*LTAAVP
Trigger: AGGTACAGCTGCTGTTAAGCAATGGAGGGAAGGGAG...CTCAGAGTCTACTTTCCAAGGAAGTGGGCCTATAACATAGCTCTTCCAGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CCA 90 bp AAAGTAGACTCTGAGATGGAGATTAGCATGCGGGAAGTTTATCAGGGATTGCTCACCCTTTCACCATGTTaGGTGATAGCAACCGTATGG +
Preference number: 4 (lower is better)
Translates to: KVDSEMEISMREVYQGLLTLSPC*VIATVW
Trigger: CCATACGGTTGCTATCACCCAACATGGTGAAAGGGT...GAGCAATCCCTGATAAACTTCCCGCATGCTAATCTCCATCTCAGAGTCTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CCATCACCCAAACTCAAAAGCGTCTTTGAACGGCAGAGACAGGCCCATTTTCCTAGATATCTCCACTTCTaGGTTTTTCCATACTCTGCT +
Preference number: 4 (lower is better)
Translates to: PSPKLKSVFERQRQAHFPRYLHF*VFPYSA
Trigger: AGCAGAGTATGGAAAAACCCAGAAGTGGAGATATCT...AGGAAAATGGGCCTGTCTCTGCCGTTCAAAGACGCTTTTGAGTTTGGGTGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CTCCACGTGAATCAACTGAGTACCAAAGATATACCTCCCTTCCCTCCATTGCTTCAAAGCTTTGTTTTCTaGATGGACTCCCTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: LHVNQLSTKDIPPFPPLLQSFVF*MDSLPL
Trigger: CAAGGGAAGGGAGTCCATCCAGAAAACAAAGCTTTG...AAGCAATGGAGGGAAGGGAGGTATATCTTTGGTACTCAGTTGATTCACGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp ACAGTTGCAAGCTGGCAGCTTCAGGATAGCGCAGTAGATGAAAGGACAAGTGGACCTGCTTTCATTTCTTaGTTCCTGGACTCATGTATT +
Preference number: 4 (lower is better)
Translates to: TVASWQLQDSAVDERTSGPAFIS*FLDSCI
Trigger: AATACATGAGTCCAGGAACCAAGAAATGAAAGCAGG...TCCACTTGTCCTTTCATCTACTGCGCTATCCTGAAGCTGCCAGCTTGCAACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp ACATTTGTGCTGCTCAGCTCTACTTTTTGGTTTAAGTTCTGGTGGACCTCCTTTTGGTTTAAGTTCTGGTaGACCTCCTTTCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: TFVLLSSTFWFKFWWTSFWFKFW*TSFPGG
Trigger: TCCCCCAGGAAAGGAGGTCCACCAGAACTTAAACCA...AAAGGAGGTCCACCAGAACTTAAACCAAAAAGTAGAGCTGAGCAGCACAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
3UTR CAA 72 bp CAGCTCATGATGAACAGCTTTGGTCACATGGTCAACTaGATGATCCATGGTCTGATGATCTGTCTCTACCAG +
Preference number: 4 (lower is better)
Translates to: QLMMNSFGHMVN*MIHGLMICLYQ
Trigger: CTGGTAGAGACAGATCATCAGACCATGGATCATCAAGTTGACCATGTGACCAAAGCTGTTCATCATGAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CAA 72 bp GGGTTTAATATAGCCAACTTCCCAAGTGGCTGCTGGTaGTTCTCAAGGGATGGAGCTATATCTAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: GFNIANFPSGCW*FSRDGAISRFR
Trigger: TCTGAACCTAGATATAGCTCCATCCCTTGAGAACAACCAGCAGCCACTTGGGAAGTTGGCTATATTAAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp AAAGTAGACTCTGAGATGGAGATTAGCATGCGGGAAGTTTATCAGGGATTGCTCTGGTATCCCATTATCTaGAGGCCAAAGTCCAAACTC +
Preference number: 4 (lower is better)
Translates to: KVDSEMEISMREVYQGLLWYPII*RPKSKL
Trigger: GAGTTTGGACTTTGGCCTTCAGATAATGGGATACCA...GAGCAATCCCTGATAAACTTCCCGCATGCTAATCTCCATCTCAGAGTCTACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp TGTTCCTTCACCACAGAACACAGTAAATGCATTATCTGGGTCTCCTGCCATTTTGAGAGTTGTGCTGGATaGAGCTCTACAAGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: CSFTTEHSKCIIWVSCHFESCAG*SSTSSE
Trigger: TTCACTGCTTGTAGAGCTTCATCCAGCACAACTCTC...AAAATGGCAGGAGACCCAGATAATGCATTTACTGTGTTCTGTGGTGAAGGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp AAAGTAGACTCTGAGATGGAGATTAGCATGCGGGAAGTTTATCAGGGATTGCTCTCCCTCAAAGAATGGTaGCTGTTCTTGCCTAGTAGT +
Preference number: 4 (lower is better)
Translates to: KVDSEMEISMREVYQGLLSLKEW*LFLPSS
Trigger: ACTACTAGGCAAGAACAGTCACCATTCTTTGAGGGA...GAGCAATCCCTGATAAACTTCCCGCATGCTAATCTCCATCTCAGAGTCTACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR TCA 90 bp AAAGTAGACTCTGAGATGGAGATTAGCATGCGGGAAGTTTATCAGGGATTGCTCTCCTGGCCAACATGGTaGAACCCAATCTCTCTAAAA +
Preference number: 4 (lower is better)
Translates to: KVDSEMEISMREVYQGLLSWPTW*NPISLK
Trigger: TTTTAGAGAGATTGGGTTTCACCATGTTGGCCAGGA...GAGCAATCCCTGATAAACTTCCCGCATGCTAATCTCCATCTCAGAGTCTACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR GCA 90 bp GTCATGATAGTGAGTGACTTCTCAAGAGATCCGATGGTTTCAAAGTGTTTGGCAGTGAGGACAAGAACATaGAGATGTCTGGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: VMIVSDFSRDPMVSKCLAVRTRT*RCLGKE
Trigger: CTCTTTCCCCAGACATCTGCATGTTCTTGTCCTCAC...TGCCAAACACTTTGAAACCATCGGATCTCTTGAGAAGTCACTCACTATCATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp CTCCACGTGAATCAACTGAGTACCAAAGATATACCTCCCTTCCCTCCATTGCTTTGGAAATTCTGCACATaGATCAAGGAGAAAACAGCC +
Preference number: 4 (lower is better)
Translates to: LHVNQLSTKDIPPFPPLLWKFCT*IKEKTA
Trigger: GGCTGTTTTCTCCTTGATGCATGTGCAGAATTTCCA...AAGCAATGGAGGGAAGGGAGGTATATCTTTGGTACTCAGTTGATTCACGTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp TGTTCCTTCACCACAGAACACAGTAAATGCATTATCTGGGTCTCCTGCCATTTTCTGCTGCACCTCCTTTaGTGTGGAATCATATGGGAT +
Preference number: 4 (lower is better)
Translates to: CSFTTEHSKCIIWVSCHFLLHLL*CGIIWD
Trigger: ATCCCATATGATTCCACAGCAAAGGAGGTGCAGCAG...AAAATGGCAGGAGACCCAGATAATGCATTTACTGTGTTCTGTGGTGAAGGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp GGTCCCTCACCTCCTCAAAAACTTCCCATGGTATCCCATTATCTGAAGGCCAAACAACAAGATTCTCTTTaGTTTGATCAGGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GPSPPQKLPMVSHYLKAKQQDSL*FDQEAP
Trigger: TGGAGCTTCCTGATCAAACCAAAGAGAATCTTGTTG...TTTGGCCTTCAGATAATGGGATACCATGGGAAGTTTTTGAGGAGGTGAGGGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp CTGCTGAGCCCTTTCCTGCTCTGGGCCCCAATCAAAACACAACTTTCTGTGTCAGTTAGCAGAACTCTTTaGTTCTTTAAACATGAAGCT +
Preference number: 4 (lower is better)
Translates to: LLSPFLLWAPIKTQLSVSVSRTL*FFKHEA
Trigger: AGCTTCATGTTTAAAGAACCAAAGAGTTCTGCTAAC...TGACACAGAAAGTTGTGTTTTGATTGGGGCCCAGAGCAGGAAAGGGCTCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp ACATTTGTGCTGCTCAGCTCTACTTTTTGGTTTAAGTTCTGGTGGACCTCCTTTTTACTTCTCAGTGTGTaGGCAAGATTGGGAGGGATG +
Preference number: 4 (lower is better)
Translates to: TFVLLSSTFWFKFWWTSFLLLSV*ARLGGM
Trigger: CATCCCTCCCAATCTTGCCCACACACTGAGAAGTAA...AAAGGAGGTCCACCAGAACTTAAACCAAAAAGTAGAGCTGAGCAGCACAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp ACATTTGTGCTGCTCAGCTCTACTTTTTGGTTTAAGTTCTGGTGGACCTCCTTTGTGTCATCCGGTACATaGATGGAGCATATTCCTAGG +
Preference number: 4 (lower is better)
Translates to: TFVLLSSTFWFKFWWTSFVSSGT*MEHIPR
Trigger: CCTAGGAATATGCTCCATCCATGTACCGGATGACAC...AAAGGAGGTCCACCAGAACTTAAACCAAAAAGTAGAGCTGAGCAGCACAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp AAAAACTGGAAGAGCTATGTTATAGGCCCACTTCCTTGGAAAGTAGACTCTGAGTTTAGTGCTTCTCCATaGTATGTGCTCTCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: KNWKSYVIGPLPWKVDSEFSASP*YVLSGG
Trigger: CCCACCAGAGAGCACATACCATGGAGAAGCACTAAA...CTCAGAGTCTACTTTCCAAGGAAGTGGGCCTATAACATAGCTCTTCCAGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp ACATTTGTGCTGCTCAGCTCTACTTTTTGGTTTAAGTTCTGGTGGACCTCCTTTGTGGACCTCCTTTCCTaGGGGAAACTTAGGAAAGTA +
Preference number: 4 (lower is better)
Translates to: TFVLLSSTFWFKFWWTSFVDLLS*GKLRKV
Trigger: TACTTTCCTAAGTTTCCCCCAGGAAAGGAGGTCCAC...AAAGGAGGTCCACCAGAACTTAAACCAAAAAGTAGAGCTGAGCAGCACAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CCA 90 bp AAAGTAGACTCTGAGATGGAGATTAGCATGCGGGAAGTTTATCAGGGATTGCTCATAGGCCCACTTCCTTaGAAAGTAGACTCTGAGATG +
Preference number: 4 (lower is better)
Translates to: KVDSEMEISMREVYQGLLIGPLP*KVDSEM
Trigger: CATCTCAGAGTCTACTTTCCAAGGAAGTGGGCCTAT...GAGCAATCCCTGATAAACTTCCCGCATGCTAATCTCCATCTCAGAGTCTACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CCA 90 bp AGGCTTTCAGCCAGAGAGCAATTTGTTTTCAACTTACTCTGGGTTCCTAAGTTAAAAATTAGCTGGGTGTaGTGGCATGGTAGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: RLSAREQFVFNLLWVPKLKISWV*WHGSPS
Trigger: GCTGGGACTACCATGCCACCACACCCAGCTAATTTT...TAACTTAGGAACCCAGAGTAAGTTGAAAACAAATTGCTCTCTGGCTGAAAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CAA 72 bp CTCAGAGACTGGTTGATGTCAACTGTGTGTACATTGTaGTTTAGTGCTTCTCCATGGTATGTGCTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: LRDWLMSTVCTL*FSASPWYVLSG
Trigger: ACCAGAGAGCACATACCATGGAGAAGCACTAAACAACAATGTACACACAGTTGACATCAACCAGTCTCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp GTCATGATAGTGAGTGACTTCTCAAGAGATCCGATGGTTTCAAAGTGTTTGGCATCCCTCAAAGAATGGTaGCTGTTCTTGCCTAGTAGT +
Preference number: 4 (lower is better)
Translates to: VMIVSDFSRDPMVSKCLASLKEW*LFLPSS
Trigger: ACTACTAGGCAAGAACAGTCACCATTCTTTGAGGGA...TGCCAAACACTTTGAAACCATCGGATCTCTTGAGAAGTCACTCACTATCATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp AAAAACTGGAAGAGCTATGTTATAGGCCCACTTCCTTGGAAAGTAGACTCTGAGTTCTATCTTAGGAATTaGTGCTGGCTTTGCCTGACC +
Preference number: 4 (lower is better)
Translates to: KNWKSYVIGPLPWKVDSEFYLRN*CWLCLT
Trigger: GGTCAGGCAAAGCCAGCAGCAATTCCTAAGATAGAA...CTCAGAGTCTACTTTCCAAGGAAGTGGGCCTATAACATAGCTCTTCCAGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp AAAGTAGACTCTGAGATGGAGATTAGCATGCGGGAAGTTTATCAGGGATTGCTCAGATGGAGATTAGCATaGGGGAAGTTTATCAGGGAT +
Preference number: 4 (lower is better)
Translates to: KVDSEMEISMREVYQGLLRWRLA*GKFIRD
Trigger: ATCCCTGATAAACTTCCCGCATGCTAATCTCCATCT...GAGCAATCCCTGATAAACTTCCCGCATGCTAATCTCCATCTCAGAGTCTACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CCA 90 bp AACACAGCTTTACCTTATCCACTTGCCTGGGATGGTACTTATGCTAATCCTATTTCAGGTCACTTTTTGTaGGTCTGTACAAACGTGCCG +
Preference number: 4 (lower is better)
Translates to: NTALPYPLAWDGTYANPISGHFL*VCTNVP
Trigger: CGGCACGTTTGTACAGACCCACAAAAAGTGACCTGA...AATAGGATTAGCATAAGTACCATCCCAGGCAAGTGGATAAGGTAAAGCTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CCA 90 bp GTCATGATAGTGAGTGACTTCTCAAGAGATCCGATGGTTTCAAAGTGTTTGGCACTCTGTTCCAGATGCTaGAGATATAACAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: VMIVSDFSRDPMVSKCLALCSRC*RYNREQ
Trigger: CTGTTCCCTGTTATATCTCCAGCATCTGGAACAGAG...TGCCAAACACTTTGAAACCATCGGATCTCTTGAGAAGTCACTCACTATCATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp GGTACATGGATGGAGCATATTCCTAGGTGTGGGATATGCTGTCTCCAAAACCTATCCTACCTATCCTTCTaGCTTTGGTTCAAACATGAA +
Preference number: 4 (lower is better)
Translates to: GTWMEHIPRCGICCLQNLSYLSF*LWFKHE
Trigger: TTCATGTTTGAACCAAAGCCAGAAGGATAGGTAGGA...TAGGTTTTGGAGACAGCATATCCCACACCTAGGAATATGCTCCATCCATGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp GGTCCCTCACCTCCTCAAAAACTTCCCATGGTATCCCATTATCTGAAGGCCAAATCATTTCTTGGTTCCTaGACTCATGTATTCTACCTA +
Preference number: 4 (lower is better)
Translates to: GPSPPQKLPMVSHYLKAKSFLGS*THVFYL
Trigger: TAGGTAGAATACATGAGTCCAGGAACCAAGAAATGA...TTTGGCCTTCAGATAATGGGATACCATGGGAAGTTTTTGAGGAGGTGAGGGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp AAAGTAGACTCTGAGATGGAGATTAGCATGCGGGAAGTTTATCAGGGATTGCTCTTATTTTATAAATATTaGGCAAGGGGCCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: KVDSEMEISMREVYQGLLLFYKY*ARGQAQ
Trigger: CTGCGCCTGGCCCCTTGCCCAATATTTATAAAATAA...GAGCAATCCCTGATAAACTTCCCGCATGCTAATCTCCATCTCAGAGTCTACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CCA 90 bp AAAAACTGGAAGAGCTATGTTATAGGCCCACTTCCTTGGAAAGTAGACTCTGAGATAGGCCCACTTCCTTaGAAAGTAGACTCTGAGATG +
Preference number: 4 (lower is better)
Translates to: KNWKSYVIGPLPWKVDSEIGPLP*KVDSEM
Trigger: CATCTCAGAGTCTACTTTCCAAGGAAGTGGGCCTAT...CTCAGAGTCTACTTTCCAAGGAAGTGGGCCTATAACATAGCTCTTCCAGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR TCA 90 bp AACACAGCTTTACCTTATCCACTTGCCTGGGATGGTACTTATGCTAATCCTATTGTAACTTCATCTGACTaGCATGGGGGAAGTTTAGAG +
Preference number: 4 (lower is better)
Translates to: NTALPYPLAWDGTYANPIVTSSD*HGGSLE
Trigger: CTCTAAACTTCCCCCATGTCAGTCAGATGAAGTTAC...AATAGGATTAGCATAAGTACCATCCCAGGCAAGTGGATAAGGTAAAGCTGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR TCA 90 bp AGGCTTTCAGCCAGAGAGCAATTTGTTTTCAACTTACTCTGGGTTCCTAAGTTAGAGACTCTGCTTTCATaGAGCTTACATTCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: RLSAREQFVFNLLWVPKLETLLS*SLHSGS
Trigger: ACTCCCAGAATGTAAGCTTCATGAAAGCAGAGTCTC...TAACTTAGGAACCCAGAGTAAGTTGAAAACAAATTGCTCTCTGGCTGAAAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp CTCCACGTGAATCAACTGAGTACCAAAGATATACCTCCCTTCCCTCCATTGCTTCTGATATTCTATAAATaGAAAAGGCCAGCTACCTGT +
Preference number: 4 (lower is better)
Translates to: LHVNQLSTKDIPPFPPLLLIFYK*KRPATC
Trigger: ACAGGTAGCTGGCCTTTTTCATTTATAGAATATCAG...AAGCAATGGAGGGAAGGGAGGTATATCTTTGGTACTCAGTTGATTCACGTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp AAAAACTGGAAGAGCTATGTTATAGGCCCACTTCCTTGGAAAGTAGACTCTGAGTTATTTTATAAATATTaGGCAAGGGGCCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: KNWKSYVIGPLPWKVDSELFYKY*ARGQAQ
Trigger: CTGCGCCTGGCCCCTTGCCCAATATTTATAAAATAA...CTCAGAGTCTACTTTCCAAGGAAGTGGGCCTATAACATAGCTCTTCCAGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CCA 90 bp AGCATCAAGAGTTGTTTCTTAAGAAGTATAAAATTCTTGGCTACAGATGGCATGATCAGGGATTGCTCTTaGGAAGGGGGCAGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: SIKSCFLRSIKFLATDGMIRDCS*EGGRKG
Trigger: TCCTTTCCTGCCCCCTTCCCAAGAGCAATCCCTGAT...CATGCCATCTGTAGCCAAGAATTTTATACTTCTTAAGAAACAACTCTTGATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CAA 72 bp GAGGACAAGAACATGCAGATGTCTGGGGAAAGAGCATaGCAACTGGAACAGCAAATGCAAAGAAGTAATATA +
Preference number: 4 (lower is better)
Translates to: EDKNMQMSGERA*QLEQQMQRSNI
Trigger: TATATTACTTCTTTGCATTTGCTGTTCCAGTTGCAATGCTCTTTCCCCAGACATCTGCATGTTCTTGTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
3UTR CAA 72 bp CACGCCACCATGCCTGGCTATTTGTTGTTGTTGTTGTaGTTGTTGTTGTTGTTGTTTTGTAGAATTGGGGTT +
Preference number: 4 (lower is better)
Translates to: HATMPGYLLLLL*LLLLLFCRIGV
Trigger: AACCCCAATTCTACAAAACAACAACAACAACAACAACAACAACAACAACAAATAGCCAGGCATGGTGGCGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR TCA 90 bp TGTTCCTTCACCACAGAACACAGTAAATGCATTATCTGGGTCTCCTGCCATTTTAAACATGAGAGTAGATaGAATCATCCAAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: CSFTTEHSKCIIWVSCHFKHESR*NHPRQP
Trigger: TGGTTGCCTTGGATGATTTCATCTACTCTCATGTTT...AAAATGGCAGGAGACCCAGATAATGCATTTACTGTGTTCTGTGGTGAAGGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp AGGCTTTCAGCCAGAGAGCAATTTGTTTTCAACTTACTCTGGGTTCCTAAGTTATGTCACCCAACTAACTaGAACTCCCAAAGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: RLSAREQFVFNLLWVPKLCHPTN*NSQSFV
Trigger: AACAAAGCTTTGGGAGTTTCAGTTAGTTGGGTGACA...TAACTTAGGAACCCAGAGTAAGTTGAAAACAAATTGCTCTCTGGCTGAAAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp ACATTTGTGCTGCTCAGCTCTACTTTTTGGTTTAAGTTCTGGTGGACCTCCTTTCGTTCATGGAAATTCTaGACATGCATCAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: TFVLLSSTFWFKFWWTSFRSWKF*TCIKEK
Trigger: TTTCTCCTTGATGCATGTGCAGAATTTCCATGAACG...AAAGGAGGTCCACCAGAACTTAAACCAAAAAGTAGAGCTGAGCAGCACAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp ACATTTGTGCTGCTCAGCTCTACTTTTTGGTTTAAGTTCTGGTGGACCTCCTTTAATCTCACTGCACCCTaGCCATTTGTGTTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: TFVLLSSTFWFKFWWTSFNLTAP*PFVFSK
Trigger: TTTTGAAAACACAAATGGGCAGGGTGCAGTGAGATT...AAAGGAGGTCCACCAGAACTTAAACCAAAAAGTAGAGCTGAGCAGCACAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp ACATTTGTGCTGCTCAGCTCTACTTTTTGGTTTAAGTTCTGGTGGACCTCCTTTTTTCTTTTTGTAAAATaGTTACCACAGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TFVLLSSTFWFKFWWTSFFLFVK*LPQCWA
Trigger: GGCCCAGCACTGTGGTAACCATTTTACAAAAAGAAA...AAAGGAGGTCCACCAGAACTTAAACCAAAAAGTAGAGCTGAGCAGCACAAATGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp ACATTTGTGCTGCTCAGCTCTACTTTTTGGTTTAAGTTCTGGTGGACCTCCTTTGATTCTTCCTCTGAGTaGTGTTATTCATTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: TFVLLSSTFWFKFWWTSFDSSSE*CYSFLS
Trigger: GGAAAGGAATGAATAACACCACTCAGAGGAAGAATC...AAAGGAGGTCCACCAGAACTTAAACCAAAAAGTAGAGCTGAGCAGCACAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CCA 90 bp TGTTCCTTCACCACAGAACACAGTAAATGCATTATCTGGGTCTCCTGCCATTTTCAACTTGATGATCCATaGTCTGATGATCTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: CSFTTEHSKCIIWVSCHFQLDDP*SDDLSL
Trigger: TAGAGACAGATCATCAGACCATGGATCATCAAGTTG...AAAATGGCAGGAGACCCAGATAATGCATTTACTGTGTTCTGTGGTGAAGGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR TCA 90 bp ACATTTGTGCTGCTCAGCTCTACTTTTTGGTTTAAGTTCTGGTGGACCTCCTTTTTTTCAACCAGTAGGTaGTCCATCTTTAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: TFVLLSSTFWFKFWWTSFFSTSR*SIFNSK
Trigger: CTTGGAATTAAAGATGGATCACCTACTGGTTGAAAA...AAAGGAGGTCCACCAGAACTTAAACCAAAAAGTAGAGCTGAGCAGCACAAATGT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp AGCATCAAGAGTTGTTTCTTAAGAAGTATAAAATTCTTGGCTACAGATGGCATGCTGGGGAAAGAGCATTaGAACTGGAACAGCAAATGC +
Preference number: 4 (lower is better)
Translates to: SIKSCFLRSIKFLATDGMLGKEH*NWNSKC
Trigger: GCATTTGCTGTTCCAGTTGCAATGCTCTTTCCCCAG...CATGCCATCTGTAGCCAAGAATTTTATACTTCTTAAGAAACAACTCTTGATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp AAAAACTGGAAGAGCTATGTTATAGGCCCACTTCCTTGGAAAGTAGACTCTGAGCATACTGTCCACAGCTaGTTTTGTATTACAATAGCA +
Preference number: 4 (lower is better)
Translates to: KNWKSYVIGPLPWKVDSEHTVHS*FCITIA
Trigger: TGCTATTGTAATACAAAAGCAGCTGTGGACAGTATG...CTCAGAGTCTACTTTCCAAGGAAGTGGGCCTATAACATAGCTCTTCCAGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CCA 90 bp AGGCTTTCAGCCAGAGAGCAATTTGTTTTCAACTTACTCTGGGTTCCTAAGTTATTTTCAAAAATGGTCTaGGCAAGGCAAAGTGACTCA +
Preference number: 4 (lower is better)
Translates to: RLSAREQFVFNLLWVPKLFSKMV*ARQSDS
Trigger: TGAGTCACTTTGCCTTGCCCAGACCATTTTTGAAAA...TAACTTAGGAACCCAGAGTAAGTTGAAAACAAATTGCTCTCTGGCTGAAAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR GCA 90 bp GCCACCATGCCTGGCTATTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTCATCAGCTTTTCATTTaGCAAATGAGGATGGTGATA +
Preference number: 4 (lower is better)
Translates to: ATMPGYLLLLLLLLLLLFHQLFI*QMRMVI
Trigger: TATCACCATCCTCATTTGGCAAATGAAAAGCTGATG...AAACAACAACAACAACAACAACAACAACAACAACAAATAGCCAGGCATGGTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CAA 90 bp AGCTGCGCCTCCGCTCTGGGTTCCACACCATCTGTCGGTCCACACGCTTGGGATGGGAGCATGACAGCCTaGCCAGAGAGGGAGGCCGGC +
Preference number: 5 (lower is better)
Translates to: SCASALGSTPSVGPHAWDGSMTA*PEREAG
Trigger: GCCGGCCTCCCTCTCTGGCAAGGCTGTCATGCTCCC...ATCCCAAGCGTGTGGACCGACAGATGGTGTGGAACCCAGAGCGGAGGCGCAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS CCA 90 bp CGTGCTTGCAGCGTGTTCAGGAAAAGCAGCCCTGGTAGCTGCTGTTaGCGCCCTCCAGACTGCAACCTCGTAGGCTCCCAAGCCCAGTCG +
Preference number: 5 (lower is better)
Translates to: RACSVFRKSSPGSCC*RPPDCNLVGSQAQS
Trigger: CGACTGGGCTTGGGAGCCTACGAGGTTGCAGTCTGGAGGGCGCCAACAGCAGCTACCAGGGCTGCTTTTCCTGAACACGCTGCAAGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234827.6
ENST00000498272.1
ENST00000648983.1
CDS-3UTR CAA 90 bp CTGAGAGCACTCCCAGTAGCTGTGGGAAGAGGCCCAGGAAGCATGGTGGCTGGGGATACCTCGGGTACTTaGGGCTCTGCCAGCTCATCT +
Preference number: 5 (lower is better)
Translates to: LRALPVAVGRGPGSMVAGDTSGT*GSASSS
Trigger: AGATGAGCTGGCAGAGCCCAAAGTACCCGAGGTATC...CCCAGCCACCATGCTTCCTGGGCCTCTTCCCACAGCTACTGGGAGTGCTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS CCA 90 bp ACCGTCCTCAGGTCACTTTTTGTGGGTCTGTACAAACGTGCCGACTaGCAGCGAGCCGCTCTTCACCTGAGCCCGGATTTCAGCTCGGTG +
Preference number: 5 (lower is better)
Translates to: TVLRSLFVGLYKRAD*QRAALHLSPDFSSV
Trigger: CACCGAGCTGAAATCCGGGCTCAGGTGAAGAGCGGCTCGCTGCCAGTCGGCACGTTTGTACAGACCCACAAAAAGTGACCTGAGGACGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000234827.6
ENST00000371331.1
ENST00000498272.1
ENST00000648983.1
CDS-3UTR CAA 90 bp GGCTCTGCCAGCTCATCTGTCCCACACCGCATGGCCACTTGTGTTGTAGCCTGGCAGGGTTTCGCCATGTaGGCCAGGCTGGTTTCAAAC +
Preference number: 5 (lower is better)
Translates to: GSASSSVPHRMATCVVAWQGFAM*ARLVSN
Trigger: GTTTGAAACCAGCCTGGCCAACATGGCGAAACCCTG...CCAGGCTACAACACAAGTGGCCATGCGGTGTGGGACAGATGAGCTGGCAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp GGTCTGGGCAGCACAGGATGGTGTCCACTACAGCCCACATTTGTGCTGCTCAGCTTCCAAGTTGTCAAGTaGAGGCAGTGGGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: GLGSTGWCPLQPTFVLLSFQVVK*RQWGQA
Trigger: GGCCTGGCCCCACTGCCTCAACTTGACAACTTGGAA...GCTGAGCAGCACAAATGTGGGCTGTAGTGGACACCATCCTGTGCTGCCCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CAA 90 bp CTGAGAGCACTCCCAGTAGCTGTGGGAAGAGGCCCAGGAAGCATGGTGGCTGGGGAAGTTTATCAGGGATaGCTCTTGGGAAGGGGGCAG +
Preference number: 5 (lower is better)
Translates to: LRALPVAVGRGPGSMVAGEVYQG*LLGRGQ
Trigger: CTGCCCCCTTCCCAAGAGCAATCCCTGATAAACTTC...CCCAGCCACCATGCTTCCTGGGCCTCTTCCCACAGCTACTGGGAGTGCTCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS TCA 90 bp TGGGTCTGTACAAACGTGCCGACTGGCAGCGAGCCGCTCTTCACCTaGGCCCGGATTTCAGCTCGGTGCTTTAATGTGAAGACCAGGGCT +
Preference number: 5 (lower is better)
Translates to: WVCTNVPTGSEPLFT*ARISARCFNVKTRA
Trigger: AGCCCTGGTCTTCACATTAAAGCACCGAGCTGAAATCCGGGCTCAGGTGAAGAGCGGCTCGCTGCCAGTCGGCACGTTTGTACAGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234827.6
ENST00000371331.1
ENST00000498272.1
ENST00000648983.1
CDS-3UTR CAA 90 bp CTGAGAGCACTCCCAGTAGCTGTGGGAAGAGGCCCAGGAAGCATGGTGGCTGGGGCCCAGTCGTCTGTGTaGAAACTAAACAGACGCTTC +
Preference number: 5 (lower is better)
Translates to: LRALPVAVGRGPGSMVAGAQSSV*KLNRRF
Trigger: GAAGCGTCTGTTTAGTTTCAACACAGACGACTGGGC...CCCAGCCACCATGCTTCCTGGGCCTCTTCCCACAGCTACTGGGAGTGCTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp CCCGGGAGCAACGGGGCCAGTAAAAAGCTTTCTGCCCGGTGTGGGAAGGTTGGAAACTCAAAAGCGTCTTaGAACGGCAGAGACAGGCCC +
Preference number: 5 (lower is better)
Translates to: PGSNGASKKLSARCGKVGNSKAS*NGRDRP
Trigger: GGGCCTGTCTCTGCCGTTCAAAGACGCTTTTGAGTT...TCCAACCTTCCCACACCGGGCAGAAAGCTTTTTACTGGCCCCGTTGCTCCCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CAA 90 bp GGTCTGGGCAGCACAGGATGGTGTCCACTACAGCCCACATTTGTGCTGCTCAGCCCAAGTGGCTGCTGGTaGTTCTCAAGGGATGGAGCT +
Preference number: 5 (lower is better)
Translates to: GLGSTGWCPLQPTFVLLSPSGCW*FSRDGA
Trigger: AGCTCCATCCCTTGAGAACAACCAGCAGCCACTTGG...GCTGAGCAGCACAAATGTGGGCTGTAGTGGACACCATCCTGTGCTGCCCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp GTTGAGGCAGTGGGGCCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGTTCCAAGTTGTCAAGTaGAGGCAGTGGGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: VEAVGPGLHNLELTCLGKFQVVK*RQWGQA
Trigger: GGCCTGGCCCCACTGCCTCAACTTGACAACTTGGAA...CTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGGCCCCACTGCCTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CAA 90 bp GGCCGGCCCACCCAGGAATGCCCATCCAATCGGTCCAGACTGGGATTTGGAGCCAAGTTTGGCCCAGGATaGTGGCCGAGAAACAAAATC +
Preference number: 5 (lower is better)
Translates to: GRPTQECPSNRSRLGFGAKFGPG*WPRNKI
Trigger: GATTTTGTTTCTCGGCCACAATCCTGGGCCAAACTT...GGCTCCAAATCCCAGTCTGGACCGATTGGATGGGCATTCCTGGGTGGGCCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CAA 90 bp ACCCAGGAATGCCCATCCAATCGGTCCAGACTGGGATTTGGAGCCTGTCTGTGGGGTCCAGACTGGGATTaGGAGCCTGTCTGTGGCCTA +
Preference number: 5 (lower is better)
Translates to: TQECPSNRSRLGFGACLWGPDWD*EPVCGL
Trigger: TAGGCCACAGACAGGCTCCAAATCCCAGTCTGGACC...CCACAGACAGGCTCCAAATCCCAGTCTGGACCGATTGGATGGGCATTCCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CAA 90 bp GGCCGGCCCACCCAGGAATGCCCATCCAATCGGTCCAGACTGGGATTTGGAGCCCTCAACGACTCGGTTTaGGGATCACTTCTAACTTCA +
Preference number: 5 (lower is better)
Translates to: GRPTQECPSNRSRLGFGALNDSV*GSLLTS
Trigger: TGAAGTTAGAAGTGATCCCAAAACCGAGTCGTTGAG...GGCTCCAAATCCCAGTCTGGACCGATTGGATGGGCATTCCTGGGTGGGCCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CAA 90 bp TGTCCCTGCCACATCCCAGACCATTGGCCCCTAAAAATCTCACTGCACCCTGCCCTTGAGGTAGGAGGCTaGCTTGAACCTGGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: CPCHIPDHWPLKISLHPALEVGG*LEPGRS
Trigger: TGACCTCCCAGGTTCAAGCAAGCCTCCTACCTCAAG...GGCAGGGTGCAGTGAGATTTTTAGGGGCCAATGGTCTGGGATGTGGCAGGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp CTCTGTCTGCAAAGGAACGGCACCATGGGAAAATCTAGCACAGCCAGCATCAGCAGGCAGGAGGCTCACTaGAGGCCAGGAGTCCAAGAC +
Preference number: 5 (lower is better)
Translates to: LCLQRNGTMGKSSTASISRQEAH*RPGVQD
Trigger: GTCTTGGACTCCTGGCCTCAAGTGAGCCTCCTGCCT...GCTGATGCTGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTTGCAGACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp GTTGAGGCAGTGGGGCCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGCCTCCCTTCCCTCCATaGCTTAACAGCAGCTGTACC +
Preference number: 5 (lower is better)
Translates to: VEAVGPGLHNLELTCLGKPPFPP*LNSSCT
Trigger: GGTACAGCTGCTGTTAAGCAATGGAGGGAAGGGAGG...CTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGGCCCCACTGCCTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CAA 90 bp GGACTTAGGAGTTGGACAGGCCACTCTAGAGGTCAATGTGGAGAGGGGACTGGCTGTAGAATTGGGGTTTaGCCACGTTACCCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: GLRSWTGHSRGQCGEGTGCRIGV*PRYPGW
Trigger: CCAGCCCGGGTAACGTGGCAAAACCCCAATTCTACA...GCCAGTCCCCTCTCCACATTGACCTCTAGAGTGGCCTGTCCAACTCCTAAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CAA 90 bp GGCTCTGCCAGCTCATCTGTCCCACACCGCATGGCCACTTGTGTTGTAGCCTGGATTATCTCTCCTTTATaGCTGTGTCCCCAGTGCCAG +
Preference number: 5 (lower is better)
Translates to: GSASSSVPHRMATCVVAWIISPL*LCPQCQ
Trigger: CTGGCACTGGGGACACAGCAATAAAGGAGAGATAAT...CCAGGCTACAACACAAGTGGCCATGCGGTGTGGGACAGATGAGCTGGCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp GGCTCTGCCAGCTCATCTGTCCCACACCGCATGGCCACTTGTGTTGTAGCCTGGGAAACTCCCAAAGCTTaGTTTTCTGGATGGACTCCC +
Preference number: 5 (lower is better)
Translates to: GSASSSVPHRMATCVVAWETPKA*FSGWTP
Trigger: GGGAGTCCATCCAGAAAACAAAGCTTTGGGAGTTTC...CCAGGCTACAACACAAGTGGCCATGCGGTGTGGGACAGATGAGCTGGCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp CCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGGGGTATGTCAGTGAGTTGGCAGTTCCCCCTTaGCACTCTCTCTCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: PGLHNLELTCLGKGYVSELAVPP*HSLSPL
Trigger: CAGGGGAGAGAGAGAGTGCAAAGGGGGAACTGCCAA...CTCACTGACATACCCCTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp GGTCTGGGCAGCACAGGATGGTGTCCACTACAGCCCACATTTGTGCTGCTCAGCGAGGTAACTCTTCCATaGAGGAAAATTCCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: GLGSTGWCPLQPTFVLLSEVTLP*RKIPRG
Trigger: CCCCCTGGGAATTTTCCTCAATGGAAGAGTTACCTC...GCTGAGCAGCACAAATGTGGGCTGTAGTGGACACCATCCTGTGCTGCCCAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CAA 90 bp CCCTGCATGGGGCCAAGCCCTATGCCAAGGACTGGAGGTCCAGTGAAGGAGAGAACTGGCTCAGTCACCTaGGGCAAGTCATTTAACTTC +
Preference number: 5 (lower is better)
Translates to: PCMGPSPMPRTGGPVKERTGSVT*GKSFNF
Trigger: GAAGTTAAATGACTTGCCCAAGGTGACTGAGCCAGT...TCTCTCCTTCACTGGACCTCCAGTCCTTGGCATAGGGCTTGGCCCCATGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CAA 90 bp ATAGCAACCGTATGGCGCTTCCTAGTGACAGCCAGTGTGCGTTCTGTTAGGCAGAGTGTGTGGGCAAGATaGGGAGGGATGTCTGCAAGC +
Preference number: 5 (lower is better)
Translates to: IATVWRFLVTASVRSVRQSVWAR*GGMSAS
Trigger: GCTTGCAGACATCCCTCCCAATCTTGCCCACACACT...CTGCCTAACAGAACGCACACTGGCTGTCACTAGGAAGCGCCATACGGTTGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp GTTGAGGCAGTGGGGCCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGCCACATCCCAGACCATaGGCCCCTAAAAATCTCACT +
Preference number: 5 (lower is better)
Translates to: VEAVGPGLHNLELTCLGKPHPRP*APKNLT
Trigger: AGTGAGATTTTTAGGGGCCAATGGTCTGGGATGTGG...CTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGGCCCCACTGCCTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp CTGAGATGGCCCTTCCAAGTTGTCAAGTTGAGGCAGTGGGGCCAGGCCTTCATAATAGCTAGATCAGTCTaGGTGAGTGGGAGCCATGCC +
Preference number: 5 (lower is better)
Translates to: LRWPFQVVKLRQWGQAFIIARSV*VSGSHA
Trigger: GGCATGGCTCCCACTCACCAAGACTGATCTAGCTAT...TATGAAGGCCTGGCCCCACTGCCTCAACTTGACAACTTGGAAGGGCCATCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp GTTGAGGCAGTGGGGCCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGCACTACAGCCCACATTaGTGCTGCTCAGCTCTACTT +
Preference number: 5 (lower is better)
Translates to: VEAVGPGLHNLELTCLGKHYSPH*CCSALL
Trigger: AAGTAGAGCTGAGCAGCACAAATGTGGGCTGTAGTG...CTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGGCCCCACTGCCTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CAA 90 bp TGTCCCTGCCACATCCCAGACCATTGGCCCCTAAAAATCTCACTGCACCCTGCCGAGGTAACTCTTCCATaGAGGAAAATTCCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: CPCHIPDHWPLKISLHPAEVTLP*RKIPRG
Trigger: CCCCCTGGGAATTTTCCTCAATGGAAGAGTTACCTC...GGCAGGGTGCAGTGAGATTTTTAGGGGCCAATGGTCTGGGATGTGGCAGGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp CGTTCTGTTAGGCAGCACCAGCGCACTGCAGCTAATGAAGCACATTCCTGCAGGGTGATACTATCTGCCTaGCAGGGTTGTCGTGAGGGT +
Preference number: 5 (lower is better)
Translates to: RSVRQHQRTAANEAHSCRVILSA*QGCREG
Trigger: ACCCTCACGACAACCCTGCAAGGCAGATAGTATCAC...CCTGCAGGAATGTGCTTCATTAGCTGCAGTGCGCTGGTGCTGCCTAACAGAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CAA 90 bp CCCGGGAGCAACGGGGCCAGTAAAAAGCTTTCTGCCCGGTGTGGGAAGGTTGGAAAGATTCTCTTTGGTTaGATCAGGAAGCTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: PGSNGASKKLSARCGKVGKILFG*IRKLQH
Trigger: ATGCTGGAGCTTCCTGATCAAACCAAAGAGAATCTT...TCCAACCTTCCCACACCGGGCAGAAAGCTTTTTACTGGCCCCGTTGCTCCCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CAA 90 bp CTGAGATGGCCCTTCCAAGTTGTCAAGTTGAGGCAGTGGGGCCAGGCCTTCATATGCAGTGGTACAATCTaGGCTTACTGCAGCCTCCAT +
Preference number: 5 (lower is better)
Translates to: LRWPFQVVKLRQWGQAFICSGTI*AYCSLH
Trigger: ATGGAGGCTGCAGTAAGCCAAGATTGTACCACTGCA...TATGAAGGCCTGGCCCCACTGCCTCAACTTGACAACTTGGAAGGGCCATCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp CGTTCTGTTAGGCAGCACCAGCGCACTGCAGCTAATGAAGCACATTCCTGCAGGGAATTGCTGCTGGCTTaGCCTGACCTTATGACTTGG +
Preference number: 5 (lower is better)
Translates to: RSVRQHQRTAANEAHSCRELLLA*PDLMTW
Trigger: CCAAGTCATAAGGTCAGGCAAAGCCAGCAGCAATTC...CCTGCAGGAATGTGCTTCATTAGCTGCAGTGCGCTGGTGCTGCCTAACAGAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp GAGAGGCACCAGAGCTATCTAAACTCAGGGGGATGGAACCGAGTGAGCGGCAGCCCACCACAGGTCTCCTaGTTTCCAATTTTCCAATCT +
Preference number: 5 (lower is better)
Translates to: ERHQSYLNSGGWNRVSGSPPQVS*FPIFQS
Trigger: AGATTGGAAAATTGGAAACAAGGAGACCTGTGGTGG...GCTGCCGCTCACTCGGTTCCATCCCCCTGAGTTTAGATAGCTCTGGTGCCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp CCATCACCCAAACTCAAAAGCGTCTTTGAACGGCAGAGACAGGCCCATTTTCCTGCTGGAGTGTCTGGCTaGCTGGTACTGCCAATGGAA +
Preference number: 5 (lower is better)
Translates to: PSPKLKSVFERQRQAHFPAGVSG*LVLPME
Trigger: TTCCATTGGCAGTACCAGCAAGCCAGACACTCCAGC...AGGAAAATGGGCCTGTCTCTGCCGTTCAAAGACGCTTTTGAGTTTGGGTGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp CTGCTGAGCCCTTTCCTGCTCTGGGCCCCAATCAAAACACAACTTTCTGTGTCATTATGGAGACCTAGCTaGTCCCAGGCTCTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: LLSPFLLWAPIKTQLSVSLWRPS*SQALFQ
Trigger: CTGGAACAGAGCCTGGGACAAGCTAGGTCTCCATAA...TGACACAGAAAGTTGTGTTTTGATTGGGGCCCAGAGCAGGAAAGGGCTCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp CCATCACCCAAACTCAAAAGCGTCTTTGAACGGCAGAGACAGGCCCATTTTCCTTATAATCCCCACGTGTaGAGGGAGGGACATGGTGGG +
Preference number: 5 (lower is better)
Translates to: PSPKLKSVFERQRQAHFPYNPHV*REGHGG
Trigger: CCCACCATGTCCCTCCCTCAACACGTGGGGATTATA...AGGAAAATGGGCCTGTCTCTGCCGTTCAAAGACGCTTTTGAGTTTGGGTGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp CCAGTAAAAAGCTTTCTGCCCGGTGTGGGAAGGTTGGACTTAGGAGTTGGACAGGCCCAGTCGTCTGTGTaGAAACTAAACAGACGCTTC +
Preference number: 5 (lower is better)
Translates to: PVKSFLPGVGRLDLGVGQAQSSV*KLNRRF
Trigger: GAAGCGTCTGTTTAGTTTCAACACAGACGACTGGGC...CTGTCCAACTCCTAAGTCCAACCTTCCCACACCGGGCAGAAAGCTTTTTACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CAA 90 bp CAAGGTCGCTGCTCCCAGGAAGAGCTCTGCAGGGTGGTGAAATATAGTAGTAACACTACCTTGACGTGCTaGCAGCGTGTTCAGGAAAAG +
Preference number: 5 (lower is better)
Translates to: QGRCSQEELCRVVKYSSNTTLTC*QRVQEK
Trigger: CTTTTCCTGAACACGCTGCAAGCACGTCAAGGTAGT...GTTACTACTATATTTCACCACCCTGCAGAGCTCTTCCTGGGAGCAGCGACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CAA 90 bp CATCCAATCGGTCCAGACTGGGATTTGGAGCCTGTCTGTGGCCTACTGGCTCAGCAGTGTGACCTATCCTaGTTGATTTTAACACTTCCC +
Preference number: 5 (lower is better)
Translates to: HPIGPDWDLEPVCGLLAQQCDLS*LILTLP
Trigger: GGGAAGTGTTAAAATCAACAAGGATAGGTCACACTG...CTGAGCCAGTAGGCCACAGACAGGCTCCAAATCCCAGTCTGGACCGATTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CAA 90 bp CTCTGTCTGCAAAGGAACGGCACCATGGGAAAATCTAGCACAGCCAGCATCAGCTCTGGGGAAAGAGCATaGCAACTGGAACAGCAAATG +
Preference number: 5 (lower is better)
Translates to: LCLQRNGTMGKSSTASISSGERA*QLEQQM
Trigger: CATTTGCTGTTCCAGTTGCAATGCTCTTTCCCCAGA...GCTGATGCTGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTTGCAGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp CTGAGATGGCCCTTCCAAGTTGTCAAGTTGAGGCAGTGGGGCCAGGCCTTCATAGGAAAGGAAGCAGGATaGCTCAGAGAGATAAATTGG +
Preference number: 5 (lower is better)
Translates to: LRWPFQVVKLRQWGQAFIGKEAG*LREINW
Trigger: CCAATTTATCTCTCTGAGCAATCCTGCTTCCTTTCC...TATGAAGGCCTGGCCCCACTGCCTCAACTTGACAACTTGGAAGGGCCATCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CAA 90 bp GTTGAGGCAGTGGGGCCAGGCCTTCATAACCTTGAACTGACCTGCCTGGGAAAGTGTCCACAGCTGCTTTaGTATTACAATAGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: VEAVGPGLHNLELTCLGKCPQLL*YYNSRA
Trigger: AGCTCTGCTATTGTAATACAAAAGCAGCTGTGGACA...CTTTCCCAGGCAGGTCAGTTCAAGGTTATGAAGGCCTGGCCCCACTGCCTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CAA 90 bp ACCCAGGAATGCCCATCCAATCGGTCCAGACTGGGATTTGGAGCCTGTCTGTGGATGAGTTTCCCTGACTaGATCTTTGACTTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: TQECPSNRSRLGFGACLWMSFPD*IFDLAL
Trigger: AAGAGCCAAGTCAAAGATCAAGTCAGGGAAACTCAT...CCACAGACAGGCTCCAAATCCCAGTCTGGACCGATTGGATGGGCATTCCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CAA 90 bp CCATCACCCAAACTCAAAAGCGTCTTTGAACGGCAGAGACAGGCCCATTTTCCTACTACCTTGACGTGCTaGCAGCGTGTTCAGGAAAAG +
Preference number: 5 (lower is better)
Translates to: PSPKLKSVFERQRQAHFPTTLTC*QRVQEK
Trigger: CTTTTCCTGAACACGCTGCAAGCACGTCAAGGTAGT...AGGAAAATGGGCCTGTCTCTGCCGTTCAAAGACGCTTTTGAGTTTGGGTGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000648983.1
CDS-3UTR CAA 90 bp ATAGCAACCGTATGGCGCTTCCTAGTGACAGCCAGTGTGCGTTCTGTTAGGCAGCTAATCCCCACTTCCTaGAGTCTTCTACATTCCTCA +
Preference number: 5 (lower is better)
Translates to: IATVWRFLVTASVRSVRQLIPTS*SLLHSS
Trigger: TGAGGAATGTAGAAGACTCAAGGAAGTGGGGATTAG...CTGCCTAACAGAACGCACACTGGCTGTCACTAGGAAGCGCCATACGGTTGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp CCATCACCCAAACTCAAAAGCGTCTTTGAACGGCAGAGACAGGCCCATTTTCCTTCCTCAGGTCACTTTTaGTGGGTCTGTACAAACGTG +
Preference number: 5 (lower is better)
Translates to: PSPKLKSVFERQRQAHFPSSGHF*WVCTNV
Trigger: CACGTTTGTACAGACCCACAAAAAGTGACCTGAGGA...AGGAAAATGGGCCTGTCTCTGCCGTTCAAAGACGCTTTTGAGTTTGGGTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000648983.1
CDS-3UTR CAA 90 bp AAAGTAGACTCTGAGATGGAGATTAGCATGCGGGAAGTTTATCAGGGATTGCTCCCTCCCTTCCCTCCATaGCTTAACAGCAGCTGTACC +
Preference number: 5 (lower is better)
Translates to: KVDSEMEISMREVYQGLLPPFPP*LNSSCT
Trigger: GGTACAGCTGCTGTTAAGCAATGGAGGGAAGGGAGG...GAGCAATCCCTGATAAACTTCCCGCATGCTAATCTCCATCTCAGAGTCTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CAA 90 bp ATAGCAACCGTATGGCGCTTCCTAGTGACAGCCAGTGTGCGTTCTGTTAGGCAGCCATCAGCTTTTCATTaGCCAAATGAGGATGGTGAT +
Preference number: 5 (lower is better)
Translates to: IATVWRFLVTASVRSVRQPSAFH*PNEDGD
Trigger: ATCACCATCCTCATTTGGCAAATGAAAAGCTGATGG...CTGCCTAACAGAACGCACACTGGCTGTCACTAGGAAGCGCCATACGGTTGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CAA 90 bp CTCTGTCTGCAAAGGAACGGCACCATGGGAAAATCTAGCACAGCCAGCATCAGCGCACTGAGCATAGTCTaGGCAGTTAATAAATACTCC +
Preference number: 5 (lower is better)
Translates to: LCLQRNGTMGKSSTASISALSIV*AVNKYS
Trigger: GGAGTATTTATTAACTGCCAAGACTATGCTCAGTGC...GCTGATGCTGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTTGCAGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS TCA 90 bp GTTCGAATGACGAATTTATCCATTGTTAGGGGACTCCGACTACCTTaGCGTGCTTGCAGCGTGTTCTGGTCAAGAAAGAGGGCAGATTCT +
Preference number: 5 (lower is better)
Translates to: VRMTNLSIVRGLRLP*RACSVFWSRKRADS
Trigger: AGAATCTGCCCTCTTTCTTGACCAGAACACGCTGCAAGCACGTCAAGGTAGTCGGAGTCCCCTAACAATGGATAAATTCGTCATTCGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371331.1
CDS-3UTR CAA 90 bp AAAGTAGACTCTGAGATGGAGATTAGCATGCGGGAAGTTTATCAGGGATTGCTCAGGCAGGTGGACTGCTaGAGGCCAGAAGTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: KVDSEMEISMREVYQGLLRQVDC*RPEVQN
Trigger: GTTTTGAACTTCTGGCCTCAAGCAGTCCACCTGCCT...GAGCAATCCCTGATAAACTTCCCGCATGCTAATCTCCATCTCAGAGTCTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CAA 90 bp TGTTCCTTCACCACAGAACACAGTAAATGCATTATCTGGGTCTCCTGCCATTTTTCTCATGGGAGGGTCTaGAAGCTGAGATGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: CSFTTEHSKCIIWVSCHFSHGRV*KLRWPF
Trigger: GAAGGGCCATCTCAGCTTCAAGACCCTCCCATGAGA...AAAATGGCAGGAGACCCAGATAATGCATTTACTGTGTTCTGTGGTGAAGGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp ACATTTGTGCTGCTCAGCTCTACTTTTTGGTTTAAGTTCTGGTGGACCTCCTTTTCTCATGGGAGGGTCTaGAAGCTGAGATGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: TFVLLSSTFWFKFWWTSFSHGRV*KLRWPF
Trigger: GAAGGGCCATCTCAGCTTCAAGACCCTCCCATGAGA...AAAGGAGGTCCACCAGAACTTAAACCAAAAAGTAGAGCTGAGCAGCACAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CAA 90 bp AAAGTAGACTCTGAGATGGAGATTAGCATGCGGGAAGTTTATCAGGGATTGCTCGAAGTTTATCAGGGATaGCTCTTGGGAAGGGGGCAG +
Preference number: 5 (lower is better)
Translates to: KVDSEMEISMREVYQGLLEVYQG*LLGRGQ
Trigger: CTGCCCCCTTCCCAAGAGCAATCCCTGATAAACTTC...GAGCAATCCCTGATAAACTTCCCGCATGCTAATCTCCATCTCAGAGTCTACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CAA 90 bp GGTACATGGATGGAGCATATTCCTAGGTGTGGGATATGCTGTCTCCAAAACCTATATCTAGGTTCAGAGTaGGTCTCTGTTACTGGCAGG +
Preference number: 5 (lower is better)
Translates to: GTWMEHIPRCGICCLQNLYLGSE*VSVTGR
Trigger: CCTGCCAGTAACAGAGACCAACTCTGAACCTAGATA...TAGGTTTTGGAGACAGCATATCCCACACCTAGGAATATGCTCCATCCATGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp TGTTCCTTCACCACAGAACACAGTAAATGCATTATCTGGGTCTCCTGCCATTTTAGGCAGGTGGACTGCTaGAGGCCAGAAGTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: CSFTTEHSKCIIWVSCHFRQVDC*RPEVQN
Trigger: GTTTTGAACTTCTGGCCTCAAGCAGTCCACCTGCCT...AAAATGGCAGGAGACCCAGATAATGCATTTACTGTGTTCTGTGGTGAAGGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp CTCTGTCTGCAAAGGAACGGCACCATGGGAAAATCTAGCACAGCCAGCATCAGCACCCCTGTTCTAGAATaGTTAACAAAAACTGGAAGA +
Preference number: 5 (lower is better)
Translates to: LCLQRNGTMGKSSTASISTPVLE*LTKTGR
Trigger: TCTTCCAGTTTTTGTTAACAATTCTAGAACAGGGGT...GCTGATGCTGGCTGTGCTAGATTTTCCCATGGTGCCGTTCCTTTGCAGACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp GCCACCATGCCTGGCTATTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTGTCGGTCCACACGCTaGGGATTAGCTCTTCCCATG +
Preference number: 5 (lower is better)
Translates to: ATMPGYLLLLLLLLLLLFCRSTR*GLALPM
Trigger: CATGGGAAGAGCTAATCCCAAGCGTGTGGACCGACA...AAACAACAACAACAACAACAACAACAACAACAACAAATAGCCAGGCATGGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CAA 90 bp GCCACCATGCCTGGCTATTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTGACTGGCCACTCCAGTaGACCTTCCTGAGTAGTACC +
Preference number: 5 (lower is better)
Translates to: ATMPGYLLLLLLLLLLLFDWPLQ*TFLSST
Trigger: GGTACTACTCAGGAAGGTCAACTGGAGTGGCCAGTC...AAACAACAACAACAACAACAACAACAACAACAACAAATAGCCAGGCATGGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CAA 90 bp CCACCATGCCTGGCTATTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTCCCGGTGTGGGAAGGTaGGACTTAGGAGTTGGACAG +
Preference number: 5 (lower is better)
Translates to: PPCLAICCCCCCCCCCCFPGVGR*DLGVGQ
Trigger: CTGTCCAACTCCTAAGTCCAACCTTCCCACACCGGG...AAAACAACAACAACAACAACAACAACAACAACAACAAATAGCCAGGCATGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CAA 90 bp GGTCCCTCACCTCCTCAAAAACTTCCCATGGTATCCCATTATCTGAAGGCCAAAAAGATTCTCTTTGGTTaGATCAGGAAGCTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: GPSPPQKLPMVSHYLKAKKILFG*IRKLQH
Trigger: ATGCTGGAGCTTCCTGATCAAACCAAAGAGAATCTT...TTTGGCCTTCAGATAATGGGATACCATGGGAAGTTTTTGAGGAGGTGAGGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp AGGCTTTCAGCCAGAGAGCAATTTGTTTTCAACTTACTCTGGGTTCCTAAGTTAAACTCAAAAGCGTCTTaGAACGGCAGAGACAGGCCC +
Preference number: 5 (lower is better)
Translates to: RLSAREQFVFNLLWVPKLNSKAS*NGRDRP
Trigger: GGGCCTGTCTCTGCCGTTCAAAGACGCTTTTGAGTT...TAACTTAGGAACCCAGAGTAAGTTGAAAACAAATTGCTCTCTGGCTGAAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp GGTCCCTCACCTCCTCAAAAACTTCCCATGGTATCCCATTATCTGAAGGCCAAAAGAAGTATAAAATTCTaGGCTACAGATGGCATGGCC +
Preference number: 5 (lower is better)
Translates to: GPSPPQKLPMVSHYLKAKRSIKF*ATDGMA
Trigger: GGCCATGCCATCTGTAGCCAAGAATTTTATACTTCT...TTTGGCCTTCAGATAATGGGATACCATGGGAAGTTTTTGAGGAGGTGAGGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp CTCCACGTGAATCAACTGAGTACCAAAGATATACCTCCCTTCCCTCCATTGCTTACTACACCACCATGGTaGCTGTTTATACACCCATTG +
Preference number: 5 (lower is better)
Translates to: LHVNQLSTKDIPPFPPLLTTPPW*LFIHPL
Trigger: CAATGGGTGTATAAACAGCAACCATGGTGGTGTAGT...AAGCAATGGAGGGAAGGGAGGTATATCTTTGGTACTCAGTTGATTCACGTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp TGTTCCTTCACCACAGAACACAGTAAATGCATTATCTGGGTCTCCTGCCATTTTCACTACAGCCCACATTaGTGCTGCTCAGCTCTACTT +
Preference number: 5 (lower is better)
Translates to: CSFTTEHSKCIIWVSCHFHYSPH*CCSALL
Trigger: AAGTAGAGCTGAGCAGCACAAATGTGGGCTGTAGTG...AAAATGGCAGGAGACCCAGATAATGCATTTACTGTGTTCTGTGGTGAAGGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp CAAGGTCGCTGCTCCCAGGAAGAGCTCTGCAGGGTGGTGAAATATAGTAGTAACTATTACACAGTGATTTaGTTGTTGTTTGAGACAGGG +
Preference number: 5 (lower is better)
Translates to: QGRCSQEELCRVVKYSSNYYTVI*LLFETG
Trigger: CCCTGTCTCAAACAACAACAAAATCACTGTGTAATA...GTTACTACTATATTTCACCACCCTGCAGAGCTCTTCCTGGGAGCAGCGACCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CAA 90 bp AGCATCAAGAGTTGTTTCTTAAGAAGTATAAAATTCTTGGCTACAGATGGCATGGGGACTCCGACTACCTaGACGTGCTTGCAGCGTGTT +
Preference number: 5 (lower is better)
Translates to: SIKSCFLRSIKFLATDGMGTPTT*TCLQRV
Trigger: AACACGCTGCAAGCACGTCAAGGTAGTCGGAGTCCC...CATGCCATCTGTAGCCAAGAATTTTATACTTCTTAAGAAACAACTCTTGATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp TGTTCCTTCACCACAGAACACAGTAAATGCATTATCTGGGTCTCCTGCCATTTTTCCTCAGGTCACTTTTaGTGGGTCTGTACAAACGTG +
Preference number: 5 (lower is better)
Translates to: CSFTTEHSKCIIWVSCHFSSGHF*WVCTNV
Trigger: CACGTTTGTACAGACCCACAAAAAGTGACCTGAGGA...AAAATGGCAGGAGACCCAGATAATGCATTTACTGTGTTCTGTGGTGAAGGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp GTCATGATAGTGAGTGACTTCTCAAGAGATCCGATGGTTTCAAAGTGTTTGGCACTCAACGACTCGGTTTaGGGATCACTTCTAACTTCA +
Preference number: 5 (lower is better)
Translates to: VMIVSDFSRDPMVSKCLALNDSV*GSLLTS
Trigger: TGAAGTTAGAAGTGATCCCAAAACCGAGTCGTTGAG...TGCCAAACACTTTGAAACCATCGGATCTCTTGAGAAGTCACTCACTATCATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp GGTACATGGATGGAGCATATTCCTAGGTGTGGGATATGCTGTCTCCAAAACCTAACTAGCAGTAGGAAATaGAAGGTGATGTTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: GTWMEHIPRCGICCLQNLTSSRK*KVMFLF
Trigger: GAACAGAAACATCACCTTCAATTTCCTACTGCTAGT...TAGGTTTTGGAGACAGCATATCCCACACCTAGGAATATGCTCCATCCATGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp AAAGTAGACTCTGAGATGGAGATTAGCATGCGGGAAGTTTATCAGGGATTGCTCTCAGCAAAAGCCTTTTaGATAAGGGAAAGAGAGACC +
Preference number: 5 (lower is better)
Translates to: KVDSEMEISMREVYQGLLSAKAF*IRERET
Trigger: GGTCTCTCTTTCCCTTATCAAAAAGGCTTTTGCTGA...GAGCAATCCCTGATAAACTTCCCGCATGCTAATCTCCATCTCAGAGTCTACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp AGGCTTTCAGCCAGAGAGCAATTTGTTTTCAACTTACTCTGGGTTCCTAAGTTAATGGTTTCAAAGTGTTaGGCAGTTCCCCCTTTGCAC +
Preference number: 5 (lower is better)
Translates to: RLSAREQFVFNLLWVPKLMVSKC*AVPPLH
Trigger: GTGCAAAGGGGGAACTGCCAAACACTTTGAAACCAT...TAACTTAGGAACCCAGAGTAAGTTGAAAACAAATTGCTCTCTGGCTGAAAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp AAAAACTGGAAGAGCTATGTTATAGGCCCACTTCCTTGGAAAGTAGACTCTGAGGGAAAGGAAGCAGGATaGCTCAGAGAGATAAATTGG +
Preference number: 5 (lower is better)
Translates to: KNWKSYVIGPLPWKVDSEGKEAG*LREINW
Trigger: CCAATTTATCTCTCTGAGCAATCCTGCTTCCTTTCC...CTCAGAGTCTACTTTCCAAGGAAGTGGGCCTATAACATAGCTCTTCCAGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CAA 90 bp GTCATGATAGTGAGTGACTTCTCAAGAGATCCGATGGTTTCAAAGTGTTTGGCACATTCTATAAGCCCTTaGAGAGTTGTGCTGGATGAA +
Preference number: 5 (lower is better)
Translates to: VMIVSDFSRDPMVSKCLAHSISP*RVVLDE
Trigger: TTCATCCAGCACAACTCTCAAAGGGCTTATAGAATG...TGCCAAACACTTTGAAACCATCGGATCTCTTGAGAAGTCACTCACTATCATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp AGGCTTTCAGCCAGAGAGCAATTTGTTTTCAACTTACTCTGGGTTCCTAAGTTACAGTGTGACCTATCCTaGTTGATTTTAACACTTCCC +
Preference number: 5 (lower is better)
Translates to: RLSAREQFVFNLLWVPKLQCDLS*LILTLP
Trigger: GGGAAGTGTTAAAATCAACAAGGATAGGTCACACTG...TAACTTAGGAACCCAGAGTAAGTTGAAAACAAATTGCTCTCTGGCTGAAAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp AAAAACTGGAAGAGCTATGTTATAGGCCCACTTCCTTGGAAAGTAGACTCTGAGTATGCCCAACCCCAGTaGTATTATTTCTATCTTAGG +
Preference number: 5 (lower is better)
Translates to: KNWKSYVIGPLPWKVDSEYAQPQ*YYFYLR
Trigger: CCTAAGATAGAAATAATACAACTGGGGTTGGGCATA...CTCAGAGTCTACTTTCCAAGGAAGTGGGCCTATAACATAGCTCTTCCAGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp AAAGTAGACTCTGAGATGGAGATTAGCATGCGGGAAGTTTATCAGGGATTGCTCACCCCTGTTCTAGAATaGTTAACAAAAACTGGAAGA +
Preference number: 5 (lower is better)
Translates to: KVDSEMEISMREVYQGLLTPVLE*LTKTGR
Trigger: TCTTCCAGTTTTTGTTAACAATTCTAGAACAGGGGT...GAGCAATCCCTGATAAACTTCCCGCATGCTAATCTCCATCTCAGAGTCTACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234827.6
ENST00000391366.3
CDS-3UTR CAA 90 bp AGGCTTTCAGCCAGAGAGCAATTTGTTTTCAACTTACTCTGGGTTCCTAAGTTATGTCCACAGCTGCTTTaGTATTACAATAGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: RLSAREQFVFNLLWVPKLCPQLL*YYNSRA
Trigger: AGCTCTGCTATTGTAATACAAAAGCAGCTGTGGACA...TAACTTAGGAACCCAGAGTAAGTTGAAAACAAATTGCTCTCTGGCTGAAAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp CCACCATGCCTGGCTATTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTCTTTACCTTATCCACTaGCCTGGGATGGTACTTATG +
Preference number: 5 (lower is better)
Translates to: PPCLAICCCCCCCCCCCFLYLIH*PGMVLM
Trigger: CATAAGTACCATCCCAGGCAAGTGGATAAGGTAAAG...AAAACAACAACAACAACAACAACAACAACAACAACAAATAGCCAGGCATGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CAA 90 bp AGGCTTTCAGCCAGAGAGCAATTTGTTTTCAACTTACTCTGGGTTCCTAAGTTATCAACTGTGTGTACATaGTTGTTTAGTGCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: RLSAREQFVFNLLWVPKLSTVCT*LFSASP
Trigger: TGGAGAAGCACTAAACAACAATGTACACACAGTTGA...TAACTTAGGAACCCAGAGTAAGTTGAAAACAAATTGCTCTCTGGCTGAAAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS-3UTR CAA 90 bp AACACAGCTTTACCTTATCCACTTGCCTGGGATGGTACTTATGCTAATCCTATTTTAAGAACTGTTTCTTaGTGGAAAATGACTCCTTCC +
Preference number: 5 (lower is better)
Translates to: NTALPYPLAWDGTYANPILRTVS*WKMTPS
Trigger: GGAAGGAGTCATTTTCCACAAAGAAACAGTTCTTAA...AATAGGATTAGCATAAGTACCATCCCAGGCAAGTGGATAAGGTAAAGCTGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648983.1
CDS-3UTR CAA 90 bp AGCATCAAGAGTTGTTTCTTAAGAAGTATAAAATTCTTGGCTACAGATGGCATGTCCTGCTTTCATTTCTaGGTTCCTGGACTCATGTAT +
Preference number: 5 (lower is better)
Translates to: SIKSCFLRSIKFLATDGMSCFHF*VPGLMY
Trigger: ATACATGAGTCCAGGAACCAAGAAATGAAAGCAGGA...CATGCCATCTGTAGCCAAGAATTTTATACTTCTTAAGAAACAACTCTTGATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234827.6
CDS CCA 90 bp TCTTGTTCACAGTGTGACCTATCCTTGTTGATTTTAACACTTCCCTaGAGGGTATTTTCTTCTTTAATTCTTGTAAGGCTTCAACAAGAT +
Preference number: 5 (lower is better)
Translates to: SCSQCDLSLLILTLP*RVFSSLILVRLQQD
Trigger: ATCTTGTTGAAGCCTTACAAGAATTAAAGAAGAAAATACCCTCCAGGGAAGTGTTAAAATCAACAAGGATAGGTCACACTGTGAACAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234827.6
ENST00000371331.1
ENST00000648983.1
CDS TCA 72 bp TCACCTGAGCCCGGATTTCAGCTCGGTGCTTTAATGTaGAGACCAGGGCTCTCACCGTCCGCCGGTACGGCC +
Preference number: 6 (lower is better)
Translates to: SPEPGFQLGALM*RPGLSPSAGTA
Trigger: GGCCGTACCGGCGGACGGTGAGAGCCCTGGTCTTCACATTAAAGCACCGAGCTGAAATCCGGGCTCAGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234827.6
ENST00000371331.1
ENST00000498272.1
ENST00000648983.1
CDS GCA 72 bp GCTTGCAGCGTGTTCAGGAAAAGCAGCCCTGGTAGCTaGTGTTGGCGCCCTCCAGACTGCAACCTCGTAGGC +
Preference number: 6 (lower is better)
Translates to: ACSVFRKSSPGS*CWRPPDCNLVG
Trigger: GCCTACGAGGTTGCAGTCTGGAGGGCGCCAACAGCAGCTACCAGGGCTGCTTTTCCTGAACACGCTGCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234827.6
ENST00000498272.1
ENST00000648983.1
CDS GCA 72 bp GTCTTTGAACGGCAGAGACAGGCCCATTTTCCTCTCTaGCTGGCCCAGGGCTGGAACCGTCCTCAGGTCACT +
Preference number: 6 (lower is better)
Translates to: VFERQRQAHFPL*LAQGWNRPQVT
Trigger: AGTGACCTGAGGACGGTTCCAGCCCTGGGCCAGGCAGAGAGGAAAATGGGCCTGTCTCTGCCGTTCAAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234827.6
ENST00000498272.1
ENST00000648983.1
CDS CCA 72 bp AGCGTGTTCAGGAAAAGCAGCCCTGGTAGCTGCTGTTaGCGCCCTCCAGACTGCAACCTCGTAGGCTCCCAA +
Preference number: 6 (lower is better)
Translates to: SVFRKSSPGSCC*RPPDCNLVGSQ
Trigger: TTGGGAGCCTACGAGGTTGCAGTCTGGAGGGCGCCAACAGCAGCTACCAGGGCTGCTTTTCCTGAACACGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234827.6
ENST00000498272.1
ENST00000648983.1
CDS TCA 72 bp ACAAACGTGCCGACTGGCAGCGAGCCGCTCTTCACCTaGGCCCGGATTTCAGCTCGGTGCTTTAATGTGAAG +
Preference number: 6 (lower is better)
Translates to: TNVPTGSEPLFT*ARISARCFNVK
Trigger: CTTCACATTAAAGCACCGAGCTGAAATCCGGGCTCAGGTGAAGAGCGGCTCGCTGCCAGTCGGCACGTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234827.6
ENST00000371331.1
ENST00000498272.1
ENST00000648983.1
CDS TCA 72 bp CGCCGGTACGGCCCATTAATGAGGCGGGAGCAGAGATaGAACGTTTCCCGTTCAATATTTTCAACCAGTAGG +
Preference number: 6 (lower is better)
Translates to: RRYGPLMRREQR*NVSRSIFSTSR
Trigger: CCTACTGGTTGAAAATATTGAACGGGAAACGTTTCATCTCTGCTCCCGCCTCATTAATGGGCCGTACCGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234827.6
ENST00000371331.1
ENST00000498272.1
ENST00000648983.1
CDS TCA 72 bp ACGAATTTATCCATTGTTAGGGGACTCCGACTACCTTaGCGTGCTTGCAGCGTGTTCAGGAAAAGCAGCCCT +
Preference number: 6 (lower is better)
Translates to: TNLSIVRGLRLP*RACSVFRKSSP
Trigger: AGGGCTGCTTTTCCTGAACACGCTGCAAGCACGTCAAGGTAGTCGGAGTCCCCTAACAATGGATAAATTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234827.6
ENST00000498272.1
ENST00000648983.1
CDS TCA 72 bp ACGAATTTATCCATTGTTAGGGGACTCCGACTACCTTaGCGTGCTTGCAGCGTGTTCTGGTCAAGAAAGAGG +
Preference number: 6 (lower is better)
Translates to: TNLSIVRGLRLP*RACSVFWSRKR
Trigger: CCTCTTTCTTGACCAGAACACGCTGCAAGCACGTCAAGGTAGTCGGAGTCCCCTAACAATGGATAAATTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371331.1
CDS TCA 72 bp AATTCTTGTAAGGCTTCAACAAGATTCTCTTTGGTTTaGTCAGGAAGCTCCAGCATAGTTTTCCATCTTTTT +
Preference number: 6 (lower is better)
Translates to: NSCKASTRFSLV*SGSSSIVFHLF
Trigger: AAAAAGATGGAAAACTATGCTGGAGCTTCCTGATCAAACCAAAGAGAATCTTGTTGAAGCCTTACAAGAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234827.6
ENST00000371331.1
ENST00000648983.1