Pregenerated sensors for TCEAL9 (Homo sapiens)
Ensembl gene IDs: ENSG00000185222Ensembl transcript IDs: ENST00000372656.5, ENST00000372661.6, ENST00000646896.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TTCATAATCCCACCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGAGGGGACGGTGGGGGTaGGGCGAGCGCTTGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: FIIPPPRGCTFFHPSQVMRGRWG*GERLVG Trigger: GCCCACCAAGCGCTCGCCCCACCCCCACCGTCCCCT...CATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGGTGGGATTATGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000646896.1 |
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| CDS-3UTR CCA 90 bp | TTCATAATCCCACCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGGGGGCGAGCGCTTGGTaGGCCGACCAGCGCCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: FIIPPPRGCTFFHPSQVMGASAW*ADQRQR Trigger: TCTCTGGCGCTGGTCGGCCCACCAAGCGCTCGCCCC...CATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGGTGGGATTATGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000646896.1 |
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| CDS-3UTR TCA 90 bp | ATCCCACCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATAGTGGAGGGACGGACCTaGCCGGCACTCCCACAAGTC | + |
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Preference number: 4 (lower is better) Translates to: IPPPRGCTFFHPSQVMSIVEGRT*PALPQV Trigger: GACTTGTGGGAGTGCCGGTCAGGTCCGTCCCTCCAC...TATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGGTGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646896.1 |
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| CDS-3UTR GCA 90 bp | ATCCCACCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATATCAGGGACCACCGCCTaGGCTGCTGAAGGAAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: IPPPRGCTFFHPSQVMSISGTTA*AAEGSW Trigger: CCAGCTTCCTTCAGCAGCGCAGGCGGTGGTCCCTGA...TATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGGTGGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372661.6 ENST00000646896.1 |
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| CDS-3UTR GCA 90 bp | TCCCACCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATATTCAGGGACCACCGCCTaGGCTGCTGAAGGAAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SHHREAVLSFILHKLCPYSGTTA*AAEGSW Trigger: CCAGCTTCCTTCAGCAGCGCAGGCGGTGGTCCCTGA...ATATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGGTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372661.6 ENST00000646896.1 |
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| CDS-3UTR CCA 90 bp | CATAATCCCACCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCGGTTCGGGAGGAGGGTaGGGGTCCGGAAAGCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: HNPTTERLYFLSSFTSYVGSGGG*GSGKQS Trigger: AGACTGCTTTCCGGACCCCCACCCTCCTCCCGAACC...GACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGGTGGGATTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646896.1 |
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| CDS-3UTR TCA 90 bp | ATCCCACCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATAAAATTCCCGCAAGTTTaGCTCCTTCCACGGGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: IPPPRGCTFFHPSQVMSIKFPQV*LLPRAS Trigger: TGAGGCCCGTGGAAGGAGTCAAACTTGCGGGAATTT...TATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGGTGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372661.6 ENST00000646896.1 |
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| CDS-3UTR CCA 90 bp | CCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATATATGTAGCCCTGCAGATAAACTaGAAACGGGAGGGGACGGTG | + |
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Preference number: 4 (lower is better) Translates to: PPRGCTFFHPSQVMSIYVALQIN*KREGTV Trigger: CACCGTCCCCTCCCGTTTCCAGTTTATCTGCAGGGC...TACATATATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646896.1 |
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| CDS-3UTR TCA 90 bp | TTCATAATCCCACCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGAAATTCCCGCAAGTTTaGCTCCTTCCACGGGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: FIIPPPRGCTFFHPSQVMKFPQV*LLPRAS Trigger: TGAGGCCCGTGGAAGGAGTCAAACTTGCGGGAATTT...CATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGGTGGGATTATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372661.6 ENST00000646896.1 |
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| CDS-3UTR TCA 90 bp | CCACCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATATATTCACCTACCTGGCACTaGTCGGGTCAGTTTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: PPPRGCTFFHPSQVMSIYSPTWH*SGQFLP Trigger: AGGAAGAAACTGACCCGATCAGTGCCAGGTAGGTGA...ATATATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646896.1 |
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| CDS-3UTR GCA 90 bp | TCCCACCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATATTCTAGCTTTGGGTCTTaGTGGAAACAACAGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SHHREAVLSFILHKLCPYSSFGS*WKQQPC Trigger: GCAGGGCTGTTGTTTCCAGCAAGACCCAAAGCTAGA...ATATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGGTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372661.6 ENST00000646896.1 |
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| CDS-3UTR CCA 90 bp | CATAATCCCACCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCAGCTTTGGGTCTTGCTaGAAACAACAGCCCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HNPTTERLYFLSSFTSYVSFGSC*KQQPCR Trigger: TCTGCAGGGCTGTTGTTTCCAGCAAGACCCAAAGCT...GACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGGTGGGATTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372661.6 ENST00000646896.1 |
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| CDS-3UTR CCA 90 bp | CCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATATATGTAAGCCGGCAGGAACGGTaGCGCTTACAACCTTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: PPRGCTFFHPSQVMSIYVSRQER*RLQPLS Trigger: AGACAAAGGTTGTAAGCGCCACCGTTCCTGCCGGCT...TACATATATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646896.1 |
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| CDS-3UTR CCA 90 bp | CCACCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATATATAGTGGACAGGTGCTGTaGACAGAGGCCTTAGCATTT | + |
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Preference number: 4 (lower is better) Translates to: PPPRGCTFFHPSQVMSIYSGQVL*TEALAF Trigger: AAATGCTAAGGCCTCTGTCCACAGCACCTGTCCACT...ATATATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646896.1 |
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| CDS-3UTR TCA 90 bp | TCCCACCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATATAGTCAACACCTACAGTaGCACCAACCTGCAAAATTC | + |
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Preference number: 4 (lower is better) Translates to: SHHREAVLSFILHKLCPYSQHLQ*HQPAKF Trigger: GAATTTTGCAGGTTGGTGTCACTGTAGGTGTTGACT...ATATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGGTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646896.1 |
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| CDS-3UTR GCA 90 bp | ATCCCACCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATAGCCCTGCAGATAAACTaGAAAATTCCCGCAAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: IPPPRGCTFFHPSQVMSIALQIN*KIPASL Trigger: CAAACTTGCGGGAATTTTGCAGTTTATCTGCAGGGC...TATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGGTGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372661.6 |
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| CDS-3UTR GCA 90 bp | CCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATATATGTATCTAGCTTTGGGTCTTaGTGGAAACAACAGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: PPRGCTFFHPSQVMSIYVSSFGS*WKQQPC Trigger: GCAGGGCTGTTGTTTCCAGCAAGACCCAAAGCTAGA...TACATATATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372661.6 ENST00000646896.1 |
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| CDS-3UTR GCA 90 bp | TTCATAATCCCACCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGCCTCTCCACAGTGCATaGAAGTCAGTTCGTTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: FIIPPPRGCTFFHPSQVMPLHSA*KSVRFS Trigger: GGAAAAACGAACTGACTTGCATGCACTGTGGAGAGG...CATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGGTGGGATTATGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000646896.1 |
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| CDS-3UTR GCA 90 bp | CCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATATATGTAACCCCCTCTCCACAGTaGATGCAAGTCAGTTCGTTT | + |
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Preference number: 4 (lower is better) Translates to: PPRGCTFFHPSQVMSIYVTPSPQ*MQVSSF Trigger: AAACGAACTGACTTGCATGCACTGTGGAGAGGGGGT...TACATATATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000646896.1 |
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| CDS-3UTR CCA 90 bp | CCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATATATGTAAGCTTTGGGTCTTGCTaGAAACAACAGCCCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: PPRGCTFFHPSQVMSIYVSFGSC*KQQPCR Trigger: TCTGCAGGGCTGTTGTTTCCAGCAAGACCCAAAGCT...TACATATATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372661.6 ENST00000646896.1 |
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| CDS-3UTR CCA 90 bp | ATCCCACCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATAAAGTTCCTTTTGCTTTaGCCTCCTCCTCTAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IPPPRGCTFFHPSQVMSIKFLLL*PPPLAS Trigger: AGAAGCTAGAGGAGGAGGCCAAAGCAAAAGGAACTT...TATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGGTGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372661.6 ENST00000646896.1 |
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| CDS-3UTR TCA 90 bp | CCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATATATGTAAAGTTAAAGACTTGGTaGGTGGACAGGTGCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: PPRGCTFFHPSQVMSIYVKLKTW*VDRCCG Trigger: TCCACAGCACCTGTCCACTCACCAAGTCTTTAACTT...TACATATATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646896.1 |
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| CDS-3UTR GCA 90 bp | TCCCACCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATATTTTGGCTCTTCCTCATaGTTTGGTTCACTCTCATTT | + |
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Preference number: 4 (lower is better) Translates to: SHHREAVLSFILHKLCPYFGSSS*FGSLSF Trigger: AAATGAGAGTGAACCAAAGCATGAGGAAGAGCCAAA...ATATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGGTGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372661.6 ENST00000646896.1 |
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| CDS-3UTR GCA 90 bp | CCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATATATGTAACAGTGACACCAACCTaGAAAATTCCCGCAAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: PPRGCTFFHPSQVMSIYVTVTPT*KIPASL Trigger: CAAACTTGCGGGAATTTTGCAGGTTGGTGTCACTGT...TACATATATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646896.1 |
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| CDS-3UTR CCA 90 bp | CCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATATATGTAAAGTTCCTTTTGCTTTaGCCTCCTCCTCTAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PPRGCTFFHPSQVMSIYVKFLLL*PPPLAS Trigger: AGAAGCTAGAGGAGGAGGCCAAAGCAAAAGGAACTT...TACATATATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372661.6 ENST00000646896.1 |
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| CDS-3UTR GCA 90 bp | CCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATATATGTATTTGGCTCTTCCTCATaGTTTGGTTCACTCTCATTT | + |
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Preference number: 4 (lower is better) Translates to: PPRGCTFFHPSQVMSIYVFGSSS*FGSLSF Trigger: AAATGAGAGTGAACCAAAGCATGAGGAAGAGCCAAA...TACATATATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372661.6 ENST00000646896.1 |
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| CDS-3UTR CCA 90 bp | CCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATATATGTATTAGGGTTTCGGATATaGAAAGTTTCCCACCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: PPRGCTFFHPSQVMSIYVLGFRI*KVSHLL Trigger: CAAAAGGTGGGAAACTTTCCATATCCGAAACCCTAA...TACATATATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646896.1 |
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| CDS-3UTR CAA 90 bp | CATAATCCCACCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCGGGTGGGGCGAGCGCTaGGTGGGCCGACCAGCGCCA | + |
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Preference number: 5 (lower is better) Translates to: HNPTTERLYFLSSFTSYVGWGER*VGRPAP Trigger: TGGCGCTGGTCGGCCCACCAAGCGCTCGCCCCACCC...GACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGGTGGGATTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646896.1 |
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| CDS-3UTR CAA 90 bp | TTCATAATCCCACCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTGGCGCTTACAACCTTaGTCTCCACCCCAGGAGACT | + |
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Preference number: 5 (lower is better) Translates to: FIIPPPRGCTFFHPSQVMWRLQP*SPPQET Trigger: AGTCTCCTGGGGTGGAGACAAAGGTTGTAAGCGCCA...CATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGGTGGGATTATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646896.1 |
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| CDS-3UTR CAA 90 bp | TTCATAATCCCACCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGAAAATTCCCGCAAGTTaGACTCCTTCCACGGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: FIIPPPRGCTFFHPSQVMKIPAS*TPSTGL Trigger: GAGGCCCGTGGAAGGAGTCAAACTTGCGGGAATTTT...CATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGGTGGGATTATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372661.6 ENST00000646896.1 |
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| CDS-3UTR CAA 90 bp | TCCCACCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATATCCTCCTTTTCTAGCTTaGGGTCTTGCTGGAAACAAC | + |
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Preference number: 5 (lower is better) Translates to: SHHREAVLSFILHKLCPYPPFLA*GLAGNN Trigger: GTTGTTTCCAGCAAGACCCAAAGCTAGAAAAGGAGG...ATATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGGTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372661.6 ENST00000646896.1 |
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| CDS-3UTR CAA 90 bp | CATAATCCCACCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCAAAGTTTCCCACCTTTaGTTTCCCCTAGTTCACCCC | + |
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Preference number: 5 (lower is better) Translates to: HNPTTERLYFLSSFTSYVKVSHL*FPLVHP Trigger: GGGGTGAACTAGGGGAAACAAAAGGTGGGAAACTTT...GACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGGTGGGATTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646896.1 |
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| CDS-3UTR CAA 90 bp | CCACCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATATATGCTCTTCCTCATGCTTaGGTTCACTCTCATTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: PPPRGCTFFHPSQVMSIYALPHA*VHSHFL Trigger: CAGAAAATGAGAGTGAACCAAAGCATGAGGAAGAGC...ATATATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372661.6 ENST00000646896.1 |
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| CDS-3UTR CAA 90 bp | CCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATATATGTAAAAGTTCCTTTTGCTTaGGCCTCCTCCTCTAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: PPRGCTFFHPSQVMSIYVKVPFA*ASSSSF Trigger: GAAGCTAGAGGAGGAGGCCAAAGCAAAAGGAACTTT...TACATATATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372661.6 ENST00000646896.1 |
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| CDS-3UTR CAA 90 bp | CCACCGAGAGGCTGTACTTTCTTTCATCCTTCACAAGTTATGTCCATATATGTACTTGCTTATTCTTCTTaGAATACAATGACTTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: PPRGCTFFHPSQVMSIYVLAYSS*NTMTSG Trigger: GCCAGAAGTCATTGTATTCAAAGAAGAATAAGCAAG...TACATATATGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372661.6 |
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| CDS CAA 72 bp | CCTACAGTGACACCAACCTGCAAAATTCCCGCAAGTTaGACTCCTTCCACGGGCCTCAGGGACCACCGCCTG | + |
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Preference number: 6 (lower is better) Translates to: PTVTPTCKIPAS*TPSTGLRDHRL Trigger: CAGGCGGTGGTCCCTGAGGCCCGTGGAAGGAGTCAAACTTGCGGGAATTTTGCAGGTTGGTGTCACTGTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646896.1 |
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| CDS CAA 72 bp | ACAGCCCTGCAGATAAACTGCAAAATTCCCGCAAGTTaGACTCCTTCCACGGGCCTCAGGGACCACCGCCTG | + |
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Preference number: 6 (lower is better) Translates to: TALQINCKIPAS*TPSTGLRDHRL Trigger: CAGGCGGTGGTCCCTGAGGCCCGTGGAAGGAGTCAAACTTGCGGGAATTTTGCAGTTTATCTGCAGGGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372661.6 |
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| CDS TCA 72 bp | TTGAATACAATGACTTCTGCAAAATTCCCGCAAGTTTaGCTCCTTCCACGGGCCTCAGGGACCACCGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: LNTMTSAKFPQV*LLPRASGTTAC Trigger: GCAGGCGGTGGTCCCTGAGGCCCGTGGAAGGAGTCAAACTTGCGGGAATTTTGCAGAAGTCATTGTATTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372656.5 |
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| CDS GCA 72 bp | AGAAATCCCCAGTCAACACCTACAGTGACACCAACCTaGAAAATTCCCGCAAGTTTGACTCCTTCCACGGGC | + |
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Preference number: 6 (lower is better) Translates to: RNPQSTPTVTPT*KIPASLTPSTG Trigger: GCCCGTGGAAGGAGTCAAACTTGCGGGAATTTTGCAGGTTGGTGTCACTGTAGGTGTTGACTGGGGATTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000646896.1 |
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| CDS CAA 90 bp | AGCTTTCCTCCTTTAGGGTTTCGGATATGGAAAGTTTCCCACCTTTaGTTTCCCCTAGTTCACCCCCTCTCCACAGTGCATGCAAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: SFPPLGFRIWKVSHL*FPLVHPLSTVHASQ Trigger: CTGACTTGCATGCACTGTGGAGAGGGGGTGAACTAGGGGAAACAAAAGGTGGGAAACTTTCCATATCCGAAACCCTAAAGGAGGAAAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000646896.1 |
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| CDS CAA 72 bp | CCTTTAGGGTTTCGGATATGGAAAGTTTCCCACCTTTaGTTTCCCCTAGTTCACCCCCTCTCCACAGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: PLGFRIWKVSHL*FPLVHPLSTVH Trigger: ATGCACTGTGGAGAGGGGGTGAACTAGGGGAAACAAAAGGTGGGAAACTTTCCATATCCGAAACCCTAAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000646896.1 |
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| CDS TCA 72 bp | GTGGGGGTCCGGAAAGCAGTCTTAGATAGCAGAGGATaGTTATTTTTAAACTACCACAGGTCTCCCTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: VGVRKAVLDSRG*LFLNYHRSPCS Trigger: AGAACAGGGAGACCTGTGGTAGTTTAAAAATAATCATCCTCTGCTATCTAAGACTGCTTTCCGGACCCCCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000646896.1 |
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