Pregenerated sensors for TCEAL7 (Homo sapiens)
Ensembl gene IDs: ENSG00000182916Ensembl transcript IDs: ENST00000332431.5, ENST00000372666.1
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TTCATTGCCTTCCAAAGGCGATTGACAAGTTCTTTTACTGTCTACTTTAGGGTTCACGGCACGCTTGTCTaGAGGGCAGTAAGGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: FIAFQRRLTSSFTVYFRVHGTLV*RAVRSW Trigger: CCAGCTCCTTACTGCCCTGCAGACAAGCGTGCCGTG...AACCCTAAAGTAGACAGTAAAAGAACTTGTCAATCGCCTTTGGAAGGCAATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332431.5 |
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| CDS-3UTR GCA 90 bp | GGGTCAAAAGATGAGATGTTGACAAGAGTCATATGTAAATCTCAGCAACATCGACACGGCACGCTTGTCTaGAGGGCAGTAAGGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GSKDEMLTRVICKSQQHRHGTLV*RAVRSW Trigger: CCAGCTCCTTACTGCCCTGCAGACAAGCGTGCCGTG...TCGATGTTGCTGAGATTTACATATGACTCTTGTCAACATCTCATCTTTTGACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332431.5 ENST00000372666.1 |
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| CDS-3UTR CCA 90 bp | ATTGCCTTCCAAAGGCGATTGACAAGTTCTTTTACTGTCTACTTTAGGGTTTTTAGCTCTTCCTTCCCTTaGCCACAAGCACGCACGGCA | + |
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Preference number: 4 (lower is better) Translates to: IAFQRRLTSSFTVYFRVFSSSFP*PQARTA Trigger: TGCCGTGCGTGCTTGTGGCCAAGGGAAGGAAGAGCT...AAAAACCCTAAAGTAGACAGTAAAAGAACTTGTCAATCGCCTTTGGAAGGCAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332431.5 |
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| CDS-3UTR CCA 90 bp | TTGACAAGAGTCATATGTAAATCTCAGCAACATCGAATGACTGGAGTAAAACGAACCTCTTCCTTCCCTTaGCCACAAGCACGCACGGCA | + |
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Preference number: 4 (lower is better) Translates to: LTRVICKSQQHRMTGVKRTSSFP*PQARTA Trigger: TGCCGTGCGTGCTTGTGGCCAAGGGAAGGAAGAGGT...TCGTTTTACTCCAGTCATTCGATGTTGCTGAGATTTACATATGACTCTTGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372666.1 |
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| CDS-3UTR TCA 90 bp | TTGACAAGAGTCATATGTAAATCTCAGCAACATCGAATGACTGGAGTAAAACGATCCCCCAGATGTCTGTaGACACAGATCCTGGGACCT | + |
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Preference number: 4 (lower is better) Translates to: LTRVICKSQQHRMTGVKRSPRCL*TQILGP Trigger: AGGTCCCAGGATCTGTGTTCACAGACATCTGGGGGA...TCGTTTTACTCCAGTCATTCGATGTTGCTGAGATTTACATATGACTCTTGTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000332431.5 ENST00000372666.1 |
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| CDS-3UTR GCA 90 bp | GGGTCAAAAGATGAGATGTTGACAAGAGTCATATGTAAATCTCAGCAACATCGATCCTGCTTAACTCTGTaGGGGGTAGTTTCCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GSKDEMLTRVICKSQQHRSCLTL*GVVSCS Trigger: GGAGCAGGAAACTACCCCGCACAGAGTTAAGCAGGA...TCGATGTTGCTGAGATTTACATATGACTCTTGTCAACATCTCATCTTTTGACCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000332431.5 ENST00000372666.1 |
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| CDS-3UTR TCA 90 bp | ATGTTGACAAGAGTCATATGTAAATCTCAGCAACATCGAATGACTGGAGTAAAATCCCCCAGATGTCTGTaGACACAGATCCTGGGACCT | + |
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Preference number: 4 (lower is better) Translates to: MLTRVICKSQQHRMTGVKSPRCL*TQILGP Trigger: AGGTCCCAGGATCTGTGTTCACAGACATCTGGGGGA...TTTTACTCCAGTCATTCGATGTTGCTGAGATTTACATATGACTCTTGTCAACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000332431.5 ENST00000372666.1 |
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| CDS-3UTR GCA 90 bp | TTGACAAGAGTCATATGTAAATCTCAGCAACATCGAATGACTGGAGTAAAACGATCCTGCTTAACTCTGTaGGGGGTAGTTTCCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LTRVICKSQQHRMTGVKRSCLTL*GVVSCS Trigger: GGAGCAGGAAACTACCCCGCACAGAGTTAAGCAGGA...TCGTTTTACTCCAGTCATTCGATGTTGCTGAGATTTACATATGACTCTTGTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000332431.5 ENST00000372666.1 |
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| CDS-3UTR GCA 90 bp | TTCATTGCCTTCCAAAGGCGATTGACAAGTTCTTTTACTGTCTACTTTAGGGTTGGACGGTCCCGAGAATaGCTATGGTTAGAATGCAGA | + |
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Preference number: 4 (lower is better) Translates to: FIAFQRRLTSSFTVYFRVGRSRE*LWLECR Trigger: TCTGCATTCTAACCATAGGCATTCTCGGGACCGTCC...AACCCTAAAGTAGACAGTAAAAGAACTTGTCAATCGCCTTTGGAAGGCAATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332431.5 |
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| CDS-3UTR GCA 90 bp | GGGTCAAAAGATGAGATGTTGACAAGAGTCATATGTAAATCTCAGCAACATCGAGGACGGTCCCGAGAATaGCTATGGTTAGAATGCAGA | + |
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Preference number: 4 (lower is better) Translates to: GSKDEMLTRVICKSQQHRGRSRE*LWLECR Trigger: TCTGCATTCTAACCATAGGCATTCTCGGGACCGTCC...TCGATGTTGCTGAGATTTACATATGACTCTTGTCAACATCTCATCTTTTGACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332431.5 ENST00000372666.1 |
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| CDS-3UTR CCA 90 bp | GGGTCAAAAGATGAGATGTTGACAAGAGTCATATGTAAATCTCAGCAACATCGATCCCGAGAATGCCTATaGTTAGAATGCAGAGCCCTA | + |
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Preference number: 4 (lower is better) Translates to: GSKDEMLTRVICKSQQHRSRECL*LECRAL Trigger: TAGGGCTCTGCATTCTAACCATAGGCATTCTCGGGA...TCGATGTTGCTGAGATTTACATATGACTCTTGTCAACATCTCATCTTTTGACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332431.5 ENST00000372666.1 |
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| CDS-3UTR CCA 90 bp | GGGTCAAAAGATGAGATGTTGACAAGAGTCATATGTAAATCTCAGCAACATCGATGGCACGCTGCACTTTaGCTTTCCTTCGTTTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: GSKDEMLTRVICKSQQHRWHAAL*LSFVFF Trigger: AAAGAAAACGAAGGAAAGCCAAAGTGCAGCGTGCCA...TCGATGTTGCTGAGATTTACATATGACTCTTGTCAACATCTCATCTTTTGACCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000332431.5 ENST00000372666.1 |
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| CDS-3UTR CCA 90 bp | TTGACAAGAGTCATATGTAAATCTCAGCAACATCGAATGACTGGAGTAAAACGATCCCGAGAATGCCTATaGTTAGAATGCAGAGCCCTA | + |
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Preference number: 4 (lower is better) Translates to: LTRVICKSQQHRMTGVKRSRECL*LECRAL Trigger: TAGGGCTCTGCATTCTAACCATAGGCATTCTCGGGA...TCGTTTTACTCCAGTCATTCGATGTTGCTGAGATTTACATATGACTCTTGTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332431.5 ENST00000372666.1 |
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| CDS-3UTR CCA 90 bp | ATGTTGACAAGAGTCATATGTAAATCTCAGCAACATCGAATGACTGGAGTAAAATGTGAACACAGATCCTaGGACCTCTTCCTTCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: MLTRVICKSQQHRMTGVKCEHRS*DLFLPL Trigger: CAAGGGAAGGAAGAGGTCCCAGGATCTGTGTTCACA...TTTTACTCCAGTCATTCGATGTTGCTGAGATTTACATATGACTCTTGTCAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372666.1 |
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| CDS-3UTR CCA 90 bp | GAGTTTATTAAGTGTTTCATTGCCTTCCAAAGGCGATTGACAAGTTCTTTTACTGGAAGGAGCTATCTGTaGATCAACCAGCTCTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: EFIKCFIAFQRRLTSSFTGRSYL*INQLFL Trigger: AAGGAAGAGCTGGTTGATCCACAGATAGCTCCTTCC...AGTAAAAGAACTTGTCAATCGCCTTTGGAAGGCAATGAAACACTTAATAAACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332431.5 |
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| CDS-3UTR CCA 90 bp | ATTGCCTTCCAAAGGCGATTGACAAGTTCTTTTACTGTCTACTTTAGGGTTTTTTGGCACGCTGCACTTTaGCTTTCCTTCGTTTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: IAFQRRLTSSFTVYFRVFWHAAL*LSFVFF Trigger: AAAGAAAACGAAGGAAAGCCAAAGTGCAGCGTGCCA...AAAAACCCTAAAGTAGACAGTAAAAGAACTTGTCAATCGCCTTTGGAAGGCAAT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000332431.5 |
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| CDS-3UTR CCA 90 bp | GAGTTTATTAAGTGTTTCATTGCCTTCCAAAGGCGATTGACAAGTTCTTTTACTTTTTTCCTCCCTCTTTaGCACGCTGCACTTTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: EFIKCFIAFQRRLTSSFTFFLPL*HAALWL Trigger: AAGCCAAAGTGCAGCGTGCCAAAGAGGGAGGAAAAA...AGTAAAAGAACTTGTCAATCGCCTTTGGAAGGCAATGAAACACTTAATAAACTC 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000332431.5 |
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| CDS-3UTR GCA 90 bp | ATGTTGACAAGAGTCATATGTAAATCTCAGCAACATCGAATGACTGGAGTAAAAGTTGTTGTTGTTTCCTaGTTAACTCTGTGCGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: MLTRVICKSQQHRMTGVKVVVVS*LTLCGV Trigger: TACCCCGCACAGAGTTAAGCAGGAAACAACAACAAC...TTTTACTCCAGTCATTCGATGTTGCTGAGATTTACATATGACTCTTGTCAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000332431.5 ENST00000372666.1 |
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| CDS-3UTR CCA 90 bp | GGGTCAAAAGATGAGATGTTGACAAGAGTCATATGTAAATCTCAGCAACATCGAGAGAAATTAATTAAATaGGATAAGGACGGTCCCGAG | + |
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Preference number: 4 (lower is better) Translates to: GSKDEMLTRVICKSQQHREKLIK*DKDGPE Trigger: CTCGGGACCGTCCTTATCCCATTTAATTAATTTCTC...TCGATGTTGCTGAGATTTACATATGACTCTTGTCAACATCTCATCTTTTGACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332431.5 ENST00000372666.1 |
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| CDS-3UTR TCA 90 bp | TTGACAAGAGTCATATGTAAATCTCAGCAACATCGAATGACTGGAGTAAAACGAGATTGGGTCAAAAGATaGGATGTTGACAAGAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: LTRVICKSQQHRMTGVKRDWVKR*DVDKSH Trigger: ATGACTCTTGTCAACATCTCATCTTTTGACCCAATC...TCGTTTTACTCCAGTCATTCGATGTTGCTGAGATTTACATATGACTCTTGTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000332431.5 ENST00000372666.1 |
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| CDS-3UTR TCA 90 bp | GAGTTTATTAAGTGTTTCATTGCCTTCCAAAGGCGATTGACAAGTTCTTTTACTCCTTCCAAAGGCGATTaGCAAGTTCTTTTACTGTCT | + |
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Preference number: 4 (lower is better) Translates to: EFIKCFIAFQRRLTSSFTPSKGD*QVLLLS Trigger: AGACAGTAAAAGAACTTGTCAATCGCCTTTGGAAGG...AGTAAAAGAACTTGTCAATCGCCTTTGGAAGGCAATGAAACACTTAATAAACTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332431.5 |
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| CDS-3UTR GCA 90 bp | TTGACAAGAGTCATATGTAAATCTCAGCAACATCGAATGACTGGAGTAAAACGAAAATTCCCTTCTGTTTaGTGGCGTTCAAATTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LTRVICKSQQHRMTGVKRKFPSV*WRSNSP Trigger: TGGAGAATTTGAACGCCAGCAAACAGAAGGGAATTT...TCGTTTTACTCCAGTCATTCGATGTTGCTGAGATTTACATATGACTCTTGTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000332431.5 ENST00000372666.1 |
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| CDS-3UTR CCA 90 bp | TTGACAAGAGTCATATGTAAATCTCAGCAACATCGAATGACTGGAGTAAAACGAGAGAAATTAATTAAATaGGATAAGGACGGTCCCGAG | + |
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Preference number: 4 (lower is better) Translates to: LTRVICKSQQHRMTGVKREKLIK*DKDGPE Trigger: CTCGGGACCGTCCTTATCCCATTTAATTAATTTCTC...TCGTTTTACTCCAGTCATTCGATGTTGCTGAGATTTACATATGACTCTTGTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332431.5 ENST00000372666.1 |
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| CDS-3UTR TCA 90 bp | GAGTTTATTAAGTGTTTCATTGCCTTCCAAAGGCGATTGACAAGTTCTTTTACTGATTGGGTCAAAAGATaGGATGTTGACAAGAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: EFIKCFIAFQRRLTSSFTDWVKR*DVDKSH Trigger: ATGACTCTTGTCAACATCTCATCTTTTGACCCAATC...AGTAAAAGAACTTGTCAATCGCCTTTGGAAGGCAATGAAACACTTAATAAACTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332431.5 |
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| CDS-3UTR GCA 90 bp | ATGTTGACAAGAGTCATATGTAAATCTCAGCAACATCGAATGACTGGAGTAAAAAAATTCCCTTCTGTTTaGTGGCGTTCAAATTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: MLTRVICKSQQHRMTGVKKFPSV*WRSNSP Trigger: TGGAGAATTTGAACGCCAGCAAACAGAAGGGAATTT...TTTTACTCCAGTCATTCGATGTTGCTGAGATTTACATATGACTCTTGTCAACAT 37% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENST00000332431.5 ENST00000372666.1 |
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| CDS-3UTR GCA 90 bp | TTGACAAGAGTCATATGTAAATCTCAGCAACATCGAATGACTGGAGTAAAACGATGCCTATGGTTAGAATaGAGAGCCCTAAATTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: LTRVICKSQQHRMTGVKRCLWLE*RALNFF Trigger: AAAGAAATTTAGGGCTCTGCATTCTAACCATAGGCA...TCGTTTTACTCCAGTCATTCGATGTTGCTGAGATTTACATATGACTCTTGTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332431.5 ENST00000372666.1 |
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| CDS-3UTR GCA 90 bp | ATGTTGACAAGAGTCATATGTAAATCTCAGCAACATCGAATGACTGGAGTAAAATGCCTATGGTTAGAATaGAGAGCCCTAAATTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: MLTRVICKSQQHRMTGVKCLWLE*RALNFF Trigger: AAAGAAATTTAGGGCTCTGCATTCTAACCATAGGCA...TTTTACTCCAGTCATTCGATGTTGCTGAGATTTACATATGACTCTTGTCAACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332431.5 ENST00000372666.1 |
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| CDS-3UTR CCA 90 bp | ATGTTGACAAGAGTCATATGTAAATCTCAGCAACATCGAATGACTGGAGTAAAAGCAACATCGAATGACTaGAGTAAAACGATAGCAAAT | + |
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Preference number: 4 (lower is better) Translates to: MLTRVICKSQQHRMTGVKATSND*SKTIAN Trigger: ATTTGCTATCGTTTTACTCCAGTCATTCGATGTTGC...TTTTACTCCAGTCATTCGATGTTGCTGAGATTTACATATGACTCTTGTCAACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000332431.5 ENST00000372666.1 |
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| 3UTR CAA 72 bp | GAGTTTATTAAGTGTTTCATTGCCTTCCAAAGGCGATaGACAAGTTCTTTTACTGTCTACTTTAGGGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: EFIKCFIAFQRR*TSSFTVYFRVF Trigger: AAAAACCCTAAAGTAGACAGTAAAAGAACTTGTCAATCGCCTTTGGAAGGCAATGAAACACTTAATAAACTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332431.5 |
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| CDS-3UTR GCA 90 bp | GAGTTTATTAAGTGTTTCATTGCCTTCCAAAGGCGATTGACAAGTTCTTTTACTTCTTTGCAGGGTTTTTaGATGATGTTGTTGTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: EFIKCFIAFQRRLTSSFTSLQGF*MMLLLF Trigger: AAACAACAACAACATCATGCAAAAACCCTGCAAAGA...AGTAAAAGAACTTGTCAATCGCCTTTGGAAGGCAATGAAACACTTAATAAACTC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332431.5 |
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| CDS-3UTR GCA 90 bp | ATGTTGACAAGAGTCATATGTAAATCTCAGCAACATCGAATGACTGGAGTAAAATCTTTGCAGGGTTTTTaGATGATGTTGTTGTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: MLTRVICKSQQHRMTGVKSLQGF*MMLLLF Trigger: AAACAACAACAACATCATGCAAAAACCCTGCAAAGA...TTTTACTCCAGTCATTCGATGTTGCTGAGATTTACATATGACTCTTGTCAACAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000332431.5 ENST00000372666.1 |
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| CDS CCA 90 bp | TTGCTGGCGTTCAAATTCTCCATACGGGCGTTTTTCCTCCCTCTTTaGCACGCTGCACTTTGGCTTTCCTTCGTTTTCTTTGCAGGGTTT | + |
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Preference number: 5 (lower is better) Translates to: LLAFKFSIRAFFLPL*HAALWLSFVFFAGF Trigger: AAACCCTGCAAAGAAAACGAAGGAAAGCCAAAGTGCAGCGTGCCAAAGAGGGAGGAAAAACGCCCGTATGGAGAATTTGAACGCCAGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000332431.5 ENST00000372666.1 |
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| CDS-3UTR CAA 90 bp | ATTGCCTTCCAAAGGCGATTGACAAGTTCTTTTACTGTCTACTTTAGGGTTTTTCAGCTCTTCCTTCCCTaGGCCACAAGCACGCACGGC | + |
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Preference number: 5 (lower is better) Translates to: IAFQRRLTSSFTVYFRVFQLFLP*ATSTHG Trigger: GCCGTGCGTGCTTGTGGCCAAGGGAAGGAAGAGCTG...AAAAACCCTAAAGTAGACAGTAAAAGAACTTGTCAATCGCCTTTGGAAGGCAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332431.5 |
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| CDS-3UTR CAA 90 bp | ATGTTGACAAGAGTCATATGTAAATCTCAGCAACATCGAATGACTGGAGTAAAAGACCTCTTCCTTCCCTaGGCCACAAGCACGCACGGC | + |
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Preference number: 5 (lower is better) Translates to: MLTRVICKSQQHRMTGVKDLFLP*ATSTHG Trigger: GCCGTGCGTGCTTGTGGCCAAGGGAAGGAAGAGGTC...TTTTACTCCAGTCATTCGATGTTGCTGAGATTTACATATGACTCTTGTCAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372666.1 |
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| CDS-3UTR CAA 90 bp | ATTGCCTTCCAAAGGCGATTGACAAGTTCTTTTACTGTCTACTTTAGGGTTTTTGCCTTCCAAAGGCGATaGACAAGTTCTTTTACTGTC | + |
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Preference number: 5 (lower is better) Translates to: IAFQRRLTSSFTVYFRVFAFQRR*TSSFTV Trigger: GACAGTAAAAGAACTTGTCAATCGCCTTTGGAAGGC...AAAAACCCTAAAGTAGACAGTAAAAGAACTTGTCAATCGCCTTTGGAAGGCAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000332431.5 |
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| CDS-3UTR CAA 90 bp | GAGTTTATTAAGTGTTTCATTGCCTTCCAAAGGCGATTGACAAGTTCTTTTACTTTTCCTTCGTTTTCTTaGCAGGGTTTTTGCATGATG | + |
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Preference number: 5 (lower is better) Translates to: EFIKCFIAFQRRLTSSFTFPSFS*QGFCMM Trigger: CATCATGCAAAAACCCTGCAAAGAAAACGAAGGAAA...AGTAAAAGAACTTGTCAATCGCCTTTGGAAGGCAATGAAACACTTAATAAACTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000332431.5 |
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| CDS-3UTR CAA 90 bp | ATGTTGACAAGAGTCATATGTAAATCTCAGCAACATCGAATGACTGGAGTAAAATTTCCTTCGTTTTCTTaGCAGGGTTTTTGCATGATG | + |
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Preference number: 5 (lower is better) Translates to: MLTRVICKSQQHRMTGVKFPSFS*QGFCMM Trigger: CATCATGCAAAAACCCTGCAAAGAAAACGAAGGAAA...TTTTACTCCAGTCATTCGATGTTGCTGAGATTTACATATGACTCTTGTCAACAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000332431.5 ENST00000372666.1 |
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| CDS TCA 72 bp | GTAGTTTCCTGCTCCTTTTCTTCCCCCAGATGTCTGTaGACACAGATCCTGGGACCTCTTCCTTCCCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: VVSCSFSSPRCL*TQILGPLPSLG Trigger: GCCAAGGGAAGGAAGAGGTCCCAGGATCTGTGTTCACAGACATCTGGGGGAAGAAAAGGAGCAGGAAACTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372666.1 |
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| CDS CAA 72 bp | AGACTGAAGCAGCCTCTGTCTAAAATTCCCTTCTGTTaGCTGGCGTTCAAATTCTCCATACGGGCGTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: RLKQPLSKIPFC*LAFKFSIRAFF Trigger: GAAAAACGCCCGTATGGAGAATTTGAACGCCAGCAAACAGAAGGGAATTTTAGACAGAGGCTGCTTCAGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000332431.5 ENST00000372666.1 |
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