Pregenerated sensors for TCEAL4 (Homo sapiens)
Ensembl gene IDs: ENSG00000133142Ensembl transcript IDs: ENST00000372629.4, ENST00000415568.2, ENST00000434216.2, ENST00000459722.1, ENST00000468024.5, ENST00000469586.1, ENST00000472484.6, ENST00000472745.1, ENST00000490644.5, ENST00000494801.5, ENST00000613326.4
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | ACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGGAGGGATAGGCACTCGGACCGGTaGCTACATCTGCGCCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: TENTALQIGQKAASNRRDRHSDR*LHLRPC Trigger: GCACGGGCGCAGATGTAGGCACCGGTCCGAGTGCCT...ATCCCTCCTGTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000415568.2 ENST00000468024.5 ENST00000472484.6 |
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| CDS-3UTR CCA 90 bp | ACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGGAGGGATGTTCCGCTGGCAGCGTaGAAGGCCCGCACACTGACC | + |
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Preference number: 4 (lower is better) Translates to: TENTALQIGQKAASNRRDVPLAA*KARTLT Trigger: GGTCAGTGTGCGGGCCTTCCACGCTGCCAGCGGAAC...ATCCCTCCTGTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372629.4 ENST00000468024.5 |
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| CDS-3UTR GCA 90 bp | ACATTTCCTACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACCCCAGCCTTTCCCCCTaGCGTACCCGTTCCCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TFPTENTALQIGQKAASNPSLSP*RTRSPS Trigger: GGAAGGGGAACGGGTACGGCAGGGGGAAAGGCTGGG...GTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGTAGGAAATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000372629.4 |
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| CDS-3UTR GCA 90 bp | ACATTTCCTACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGGCACTCGGACCGGTaGCTACATCTGCGCCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: TFPTENTALQIGQKAASNRHSDR*LHLRPC Trigger: GCACGGGCGCAGATGTAGGCACCGGTCCGAGTGCCT...GTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGTAGGAAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000415568.2 ENST00000468024.5 ENST00000472484.6 |
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| CDS-3UTR GCA 90 bp | ACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGGAGGGATACCGGTGCCTACATCTaGGCCCGTGCAGATCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: TENTALQIGQKAASNRRDTGAYI*ARADHV Trigger: CACGTGATCTGCACGGGCGCAGATGTAGGCACCGGT...ATCCCTCCTGTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468024.5 |
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| CDS-3UTR CCA 90 bp | ACATTTCCTACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACGTTCCGCTGGCAGCGTaGAAGGCCCGCACACTGACC | + |
|
Preference number: 4 (lower is better) Translates to: TFPTENTALQIGQKAASNVPLAA*KARTLT Trigger: GGTCAGTGTGCGGGCCTTCCACGCTGCCAGCGGAAC...GTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGTAGGAAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372629.4 ENST00000468024.5 |
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| CDS-3UTR CCA 90 bp | ACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGGAGGGATATTCCAGTGTTCCGCTaGCAGCGTGGAAGGCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: TENTALQIGQKAASNRRDIPVFR*QRGRPA Trigger: TGCGGGCCTTCCACGCTGCCAGCGGAACACTGGAAT...ATCCCTCCTGTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372629.4 ENST00000468024.5 |
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| CDS-3UTR TCA 90 bp | ACATTTCCTACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACGGAAGGCCCGCACACTaGCCTGGAAGAAGCTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: TFPTENTALQIGQKAASNGRPAH*PGRSWT Trigger: GGTCCAGCTTCTTCCAGGTCAGTGTGCGGGCCTTCC...GTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGTAGGAAATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468024.5 |
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| CDS-3UTR CCA 90 bp | ACATTTCCTACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACCGCCTGGCCTCCAGCTaGCATCTTGACCTCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: TFPTENTALQIGQKAASNRLASS*HLDLSI Trigger: GATGCTGAGGTCAAGATGCCAGCTGGAGGCCAGGCG...GTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGTAGGAAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372629.4 |
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| CDS-3UTR TCA 90 bp | ACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGGAGGGATCTCCAGCTGGCATCTTaGCCTCAGCATCATGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TENTALQIGQKAASNRRDLQLAS*PQHHES Trigger: ACTCTCATGATGCTGAGGTCAAGATGCCAGCTGGAG...ATCCCTCCTGTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372629.4 |
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| CDS-3UTR GCA 90 bp | ACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGGAGGGATCTCCTTTTCCTGTCCTaGGGGGATTCTGGACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TENTALQIGQKAASNRRDLLFLS*GDSGQV Trigger: AACCTGTCCAGAATCCCCGCAGGACAGGAAAAGGAG...ATCCCTCCTGTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000468024.5 ENST00000472484.6 ENST00000472745.1 |
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| CDS-3UTR GCA 90 bp | ACATTTCCTACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACCTACATCTGCGCCCGTaGAGATCACGTGAATGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TFPTENTALQIGQKAASNLHLRP*RSRECR Trigger: GCGGCATTCACGTGATCTGCACGGGCGCAGATGTAG...GTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGTAGGAAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468024.5 |
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| CDS-3UTR GCA 90 bp | ACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGGAGGGATGCAGAGAAGAGGATGTaGCTGGAAGAAGCTGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: TENTALQIGQKAASNRRDAEKRM*LEEAGP Trigger: TGGTCCAGCTTCTTCCAGGCACATCCTCTTCTCTGC...ATCCCTCCTGTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472745.1 |
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| CDS-3UTR TCA 90 bp | ACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGGAGGGATTTTGTCTCTTCCTTTTaGATTTGGGAGGCCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TENTALQIGQKAASNRRDFVSSF*IWEAPG Trigger: GCCAGGGGCCTCCCAAATTCAAAAGGAAGAGACAAA...ATCCCTCCTGTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000372629.4 |
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| CDS-3UTR CCA 90 bp | ACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGGAGGGATGCCCGCACACTGACCTaGGGAAGAGATTTAATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TENTALQIGQKAASNRRDARTLT*GRDLIS Trigger: GGAAATTAAATCTCTTCCCCAGGTCAGTGTGCGGGC...ATCCCTCCTGTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372629.4 |
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| CDS-3UTR CCA 90 bp | ACATTTCCTACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACGCCCGCACACTGACCTaGAAGAAGCTGGACCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TFPTENTALQIGQKAASNARTLT*KKLDQE Trigger: TTCTTGGTCCAGCTTCTTCCAGGTCAGTGTGCGGGC...GTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGTAGGAAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468024.5 |
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| CDS-3UTR GCA 90 bp | ACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGGAGGGATAATTTTGGGTCTCTGTaGCCTTCTTCCTCAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TENTALQIGQKAASNRRDNFGSL*PSSSEA Trigger: TGCCTCTGAGGAAGAAGGGCACAGAGACCCAAAATT...ATCCCTCCTGTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472745.1 |
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| CDS-3UTR GCA 90 bp | ACATTTCCTACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACCTCCTTTTCCTGTCCTaGGGGGATTCTGGACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TFPTENTALQIGQKAASNLLFLS*GDSGQV Trigger: AACCTGTCCAGAATCCCCGCAGGACAGGAAAAGGAG...GTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGTAGGAAATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000468024.5 ENST00000472484.6 ENST00000472745.1 |
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| CDS-3UTR CCA 90 bp | ACATTTCCTACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACCACGGGAACGGCAGATaGGGTTTACTTCCACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TFPTENTALQIGQKAASNHGNGR*GLLPLS Trigger: AGACAGTGGAAGTAAACCCCATCTGCCGTTCCCGTG...GTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGTAGGAAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472745.1 |
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| CDS-3UTR CCA 90 bp | ACATTTCCTACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACACAGACGCGCAGACCTaGAAGAAGCTGGACCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TFPTENTALQIGQKAASNTDAQT*KKLDQE Trigger: TTCTTGGTCCAGCTTCTTCCAGGTCTGCGCGTCTGT...GTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGTAGGAAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000472484.6 ENST00000494801.5 ENST00000613326.4 |
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| CDS-3UTR CCA 90 bp | ACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGGAGGGATAGAAGAGGATGTGCCTaGAAGAAGCTGGACCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TENTALQIGQKAASNRRDRRGCA*KKLDQE Trigger: TTCTTGGTCCAGCTTCTTCCAGGCACATCCTCTTCT...ATCCCTCCTGTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472745.1 |
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| CDS-3UTR TCA 90 bp | ACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGGAGGGATTTGACCTCAGCATCATaGGAGTCCCAAAATAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TENTALQIGQKAASNRRDLTSAS*ESQNKN Trigger: GTTCTTATTTTGGGACTCTCATGATGCTGAGGTCAA...ATCCCTCCTGTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372629.4 |
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| CDS-3UTR TCA 90 bp | ACATTTCCTACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACGTCCCGCTCCACATATaGTATGTGACCTTTCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: TFPTENTALQIGQKAASNVPLHI*YVTFPF Trigger: GAATGGAAAGGTCACATATCATATGTGGAGCGGGAC...GTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGTAGGAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372629.4 |
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| CDS-3UTR GCA 90 bp | ACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGGAGGGATCCTCATCTCCTGTTTTaGCCTTGTTTTCTGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TENTALQIGQKAASNRRDPHLLF*PCFLSF Trigger: GAAAGACAGAAAACAAGGGCAAAACAGGAGATGAGG...ATCCCTCCTGTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENST00000372629.4 ENST00000415568.2 ENST00000468024.5 ENST00000472484.6 ENST00000472745.1 ENST00000494801.5 ENST00000613326.4 |
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| CDS-3UTR CCA 90 bp | ACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGGAGGGATAGTACAAGTTACTTCTaGCTTTCTCTCGTCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TENTALQIGQKAASNRRDSTSYF*LSLVLW Trigger: CCACAAGACGAGAGAAAGCCAGAAGTAACTTGTACT...ATCCCTCCTGTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000372629.4 ENST00000415568.2 ENST00000468024.5 ENST00000472484.6 ENST00000472745.1 ENST00000494801.5 ENST00000613326.4 |
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| CDS-3UTR CCA 90 bp | ACATTTCCTACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACTTCCCCTCCTTTTCCTaGAAGAAGCTGGACCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: TFPTENTALQIGQKAASNFPSFS*KKLDQE Trigger: TTCTTGGTCCAGCTTCTTCCAGGAAAAGGAGGGGAA...GTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGTAGGAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000415568.2 |
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| CDS-3UTR TCA 90 bp | ACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGGAGGGATTCCACATATGATATGTaGCCTTTCCATTCTTCGCAT | + |
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Preference number: 4 (lower is better) Translates to: TENTALQIGQKAASNRRDSTYDM*PFHSSH Trigger: ATGCGAAGAATGGAAAGGTCACATATCATATGTGGA...ATCCCTCCTGTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372629.4 |
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| CDS-3UTR TCA 90 bp | ACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGGAGGGATATGAACATTTCCTACTaGGAACACTGCATTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TENTALQIGQKAASNRRDMNISY*EHCIAD Trigger: ATCTGCAATGCAGTGTTCTCAGTAGGAAATGTTCAT...ATCCCTCCTGTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000372629.4 ENST00000415568.2 ENST00000468024.5 ENST00000472484.6 ENST00000472745.1 ENST00000494801.5 ENST00000613326.4 |
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| CDS-3UTR GCA 90 bp | ACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGGAGGGATTTTCTCTTCTCATCCTaGACCTTAGCCATATTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TENTALQIGQKAASNRRDFLFSS*TLAILS Trigger: TGACAATATGGCTAAGGTGCAGGATGAGAAGAGAAA...ATCCCTCCTGTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000372629.4 ENST00000415568.2 ENST00000468024.5 ENST00000472484.6 ENST00000472745.1 ENST00000494801.5 ENST00000613326.4 |
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| CDS-3UTR CCA 90 bp | ACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGGAGGGATCTTTCTCTCGTCTTGTaGCTGTTCTTCATTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TENTALQIGQKAASNRRDLSLVL*LFFIFH Trigger: ATGGAAAATGAAGAACAGCCACAAGACGAGAGAAAG...ATCCCTCCTGTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000372629.4 ENST00000415568.2 ENST00000468024.5 ENST00000472484.6 ENST00000472745.1 ENST00000494801.5 ENST00000613326.4 |
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| CDS-3UTR GCA 90 bp | ACATTTCCTACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACCCTCATCTCCTGTTTTaGCCTTGTTTTCTGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TFPTENTALQIGQKAASNPHLLF*PCFLSF Trigger: GAAAGACAGAAAACAAGGGCAAAACAGGAGATGAGG...GTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGTAGGAAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENST00000372629.4 ENST00000415568.2 ENST00000468024.5 ENST00000472484.6 ENST00000472745.1 ENST00000494801.5 ENST00000613326.4 |
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| CDS-3UTR CCA 90 bp | ACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGGAGGGATTTTTCCATCTTTCCTTaGTTTGAAGCCATTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TENTALQIGQKAASNRRDFSIFP*FEAIPS Trigger: TGAAGGAATGGCTTCAAACCAAGGAAAGATGGAAAA...ATCCCTCCTGTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000372629.4 ENST00000415568.2 ENST00000468024.5 ENST00000472484.6 ENST00000472745.1 ENST00000494801.5 ENST00000613326.4 |
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| CDS-3UTR CCA 90 bp | ACATTTCCTACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGTACAAGTTACTTCTaGCTTTCTCTCGTCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TFPTENTALQIGQKAASNSTSYF*LSLVLW Trigger: CCACAAGACGAGAGAAAGCCAGAAGTAACTTGTACT...GTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGTAGGAAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000372629.4 ENST00000415568.2 ENST00000468024.5 ENST00000472484.6 ENST00000472745.1 ENST00000494801.5 ENST00000613326.4 |
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| CDS-3UTR TCA 90 bp | ACATTTCCTACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACATGAACATTTCCTACTaGGAACACTGCATTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TFPTENTALQIGQKAASNMNISY*EHCIAD Trigger: ATCTGCAATGCAGTGTTCTCAGTAGGAAATGTTCAT...GTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGTAGGAAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000372629.4 ENST00000415568.2 ENST00000468024.5 ENST00000472484.6 ENST00000472745.1 ENST00000494801.5 ENST00000613326.4 |
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| CDS-3UTR GCA 90 bp | ACATTTCCTACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACTTTCTCTTCTCATCCTaGACCTTAGCCATATTGTCA | + |
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Preference number: 4 (lower is better) Translates to: TFPTENTALQIGQKAASNFLFSS*TLAILS Trigger: TGACAATATGGCTAAGGTGCAGGATGAGAAGAGAAA...GTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGTAGGAAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000372629.4 ENST00000415568.2 ENST00000468024.5 ENST00000472484.6 ENST00000472745.1 ENST00000494801.5 ENST00000613326.4 |
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| CDS-3UTR CCA 90 bp | ACATTTCCTACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACCTTTCTCTCGTCTTGTaGCTGTTCTTCATTTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: TFPTENTALQIGQKAASNLSLVL*LFFIFH Trigger: ATGGAAAATGAAGAACAGCCACAAGACGAGAGAAAG...GTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGTAGGAAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000372629.4 ENST00000415568.2 ENST00000468024.5 ENST00000472484.6 ENST00000472745.1 ENST00000494801.5 ENST00000613326.4 |
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| CDS-3UTR CCA 90 bp | ACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGGAGGGATCTGATGCCATATATTTaGTTCTGCAAGTTGTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: TENTALQIGQKAASNRRDLMPYI*FCKLCF Trigger: AAAACACAACTTGCAGAACCAAATATATGGCATCAG...ATCCCTCCTGTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000472484.6 ENST00000472745.1 ENST00000613326.4 |
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| CDS-3UTR CCA 90 bp | ACATTTCCTACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACTTTTCCATCTTTCCTTaGTTTGAAGCCATTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: TFPTENTALQIGQKAASNFSIFP*FEAIPS Trigger: TGAAGGAATGGCTTCAAACCAAGGAAAGATGGAAAA...GTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGTAGGAAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000372629.4 ENST00000415568.2 ENST00000468024.5 ENST00000472484.6 ENST00000472745.1 ENST00000494801.5 ENST00000613326.4 |
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| CDS-3UTR CCA 90 bp | ACATTTCCTACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACCTGATGCCATATATTTaGTTCTGCAAGTTGTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TFPTENTALQIGQKAASNLMPYI*FCKLCF Trigger: AAAACACAACTTGCAGAACCAAATATATGGCATCAG...GTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGTAGGAAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000472484.6 ENST00000472745.1 ENST00000613326.4 |
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| CDS CCA 90 bp | CCGTACCCGTTCCCCTTCCGCCATTCCAGTGTTCCGCTGGCAGCGTaGAAGGCCCGCACACTGACCTGGAAGAAGCTGGACCAAGAATTA | + |
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Preference number: 5 (lower is better) Translates to: PYPFPFRHSSVPLAA*KARTLTWKKLDQEL Trigger: TAATTCTTGGTCCAGCTTCTTCCAGGTCAGTGTGCGGGCCTTCCACGCTGCCAGCGGAACACTGGAATGGCGGAAGGGGAACGGGTACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434216.2 |
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| CDS CCA 90 bp | AAATGGACGGAGGGCAGAGAAGAGGATGTGCCTGGAAAGCGAGCATaGATACTTGGGGGTGCTCGCCTTCCTCACCCTCTGCCCACTGCC | + |
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Preference number: 5 (lower is better) Translates to: KWTEGREEDVPGKRA*ILGGARLPHPLPTA Trigger: GGCAGTGGGCAGAGGGTGAGGAAGGCGAGCACCCCCAAGTATCCATGCTCGCTTTCCAGGCACATCCTCTTCTCTGCCCTCCGTCCATTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000434216.2 |
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| CDS CCA 90 bp | GCAGACCCGTTCCCCTTCCGCCATTCCAGTGTTCCGCTGGCAGCGTaGAAGGCCCGCACACTGACCTGGAAGAAGCTGGACCAAGAATTA | + |
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Preference number: 5 (lower is better) Translates to: ADPFPFRHSSVPLAA*KARTLTWKKLDQEL Trigger: TAATTCTTGGTCCAGCTTCTTCCAGGTCAGTGTGCGGGCCTTCCACGCTGCCAGCGGAACACTGGAATGGCGGAAGGGGAACGGGTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468024.5 |
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| CDS CCA 90 bp | TTTTCTCCGTTCCCCTTCCGCCATTCCAGTGTTCCGCTGGCAGCGTaGAAGGCCCGCACACTGACCTGGAAGAAGCTGGACCAAGAATTA | + |
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Preference number: 5 (lower is better) Translates to: FSPFPFRHSSVPLAA*KARTLTWKKLDQEL Trigger: TAATTCTTGGTCCAGCTTCTTCCAGGTCAGTGTGCGGGCCTTCCACGCTGCCAGCGGAACACTGGAATGGCGGAAGGGGAACGGAGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000459722.1 |
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| CDS-3UTR CAA 90 bp | ACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGGAGGGATACTGAGAACACTGCATaGCAGATAGGTCAAAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: TENTALQIGQKAASNRRDTENTA*QIGQKA Trigger: AGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT...ATCCCTCCTGTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000372629.4 ENST00000415568.2 ENST00000468024.5 ENST00000472484.6 ENST00000472745.1 ENST00000494801.5 ENST00000613326.4 |
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| CDS-3UTR CAA 90 bp | ACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGGAGGGATCTTTCCAAACTAATTTaGGGTCTCTGTGCCCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: TENTALQIGQKAASNRRDLSKLI*GLCALL Trigger: AAGAAGGGCACAGAGACCCAAAATTAGTTTGGAAAG...ATCCCTCCTGTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472745.1 |
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| CDS-3UTR CAA 90 bp | ACATTTCCTACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACACTGAGAACACTGCATaGCAGATAGGTCAAAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: TFPTENTALQIGQKAASNTENTA*QIGQKA Trigger: AGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT...GTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGTAGGAAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000372629.4 ENST00000415568.2 ENST00000468024.5 ENST00000472484.6 ENST00000472745.1 ENST00000494801.5 ENST00000613326.4 |
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| CDS-3UTR CAA 90 bp | ACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACAGGAGGGATACTGATGCCATATATTaGGTTCTGCAAGTTGTGTTT | + |
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Preference number: 5 (lower is better) Translates to: TENTALQIGQKAASNRRDTDAIY*VLQVVF Trigger: AAACACAACTTGCAGAACCAAATATATGGCATCAGT...ATCCCTCCTGTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000472484.6 ENST00000472745.1 ENST00000613326.4 |
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| CDS TCA 90 bp | GGGAAGAGATTTAATTTCCGAAGTTGTTATGTCCCGCTCCACATATaGTATGTGACCTTTCCATTCTTCGCATTGACAGATGTGGACTTT | + |
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Preference number: 5 (lower is better) Translates to: GKRFNFRSCYVPLHI*YVTFPFFALTDVDF Trigger: AAAGTCCACATCTGTCAATGCGAAGAATGGAAAGGTCACATATCATATGTGGAGCGGGACATAACAACTTCGGAAATTAAATCTCTTCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372629.4 |
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| CDS-3UTR CAA 90 bp | ACATTTCCTACTGAGAACACTGCATTGCAGATAGGTCAAAAGGCTGCTAGCAACACTGATGCCATATATTaGGTTCTGCAAGTTGTGTTT | + |
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Preference number: 5 (lower is better) Translates to: TFPTENTALQIGQKAASNTDAIY*VLQVVF Trigger: AAACACAACTTGCAGAACCAAATATATGGCATCAGT...GTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTTCTCAGTAGGAAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000472484.6 ENST00000472745.1 ENST00000613326.4 |
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| CDS GCA 72 bp | CCAGCCGCGGGGACAGAGGGCAGGCACTCGGACCGGTaGCTACATCTGCGCCCGTGCAGATCACGTGAATGC | + |
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Preference number: 6 (lower is better) Translates to: PAAGTEGRHSDR*LHLRPCRSREC Trigger: GCATTCACGTGATCTGCACGGGCGCAGATGTAGGCACCGGTCCGAGTGCCTGCCCTCTGTCCCCGCGGCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468024.5 |
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| CDS CCA 72 bp | TTCCCCTTCCGCCATTCCAGTGTTCCGCTGGCAGCGTaGAAGGCCCGCACACTGACCTGGAAGAAGCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: FPFRHSSVPLAA*KARTLTWKKLD Trigger: GTCCAGCTTCTTCCAGGTCAGTGTGCGGGCCTTCCACGCTGCCAGCGGAACACTGGAATGGCGGAAGGGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000434216.2 ENST00000459722.1 ENST00000468024.5 |
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| CDS CCA 72 bp | TTCCCCTTCCGCCATTCCAGTGTTCCGCTGGCAGCGTaGAAGGCCCGCACACTGACCTGGGGAAGAGATTTA | + |
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Preference number: 6 (lower is better) Translates to: FPFRHSSVPLAA*KARTLTWGRDL Trigger: TAAATCTCTTCCCCAGGTCAGTGTGCGGGCCTTCCACGCTGCCAGCGGAACACTGGAATGGCGGAAGGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372629.4 |
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| CDS CCA 72 bp | CGGTCAACGTTTTTCTCTACGCACGGGAACGGCAGATaGGGTTTACTTCCACTGTCTCACTACTGGGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: RSTFFSTHGNGR*GLLPLSHYWGG Trigger: GCCGCCCCAGTAGTGAGACAGTGGAAGTAAACCCCATCTGCCGTTCCCGTGCGTAGAGAAAAACGTTGACCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000434216.2 ENST00000472745.1 ENST00000490644.5 |
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| CDS CCA 72 bp | AGCCCTTGTTTCACTCCCTGGCTCTCCTTCACTCTCTaGCTTTCCCTCTATCTCTGGTTTTCCCTCTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SPCFTPWLSFTL*LSLYLWFSLSL Trigger: GAGAGAGAGGGAAAACCAGAGATAGAGGGAAAGCCAGAGAGTGAAGGAGAGCCAGGGAGTGAAACAAGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000372629.4 ENST00000415568.2 ENST00000468024.5 ENST00000469586.1 ENST00000472484.6 ENST00000472745.1 ENST00000494801.5 |
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| CDS CAA 90 bp | CTTTCCATTCTTCGCATTGACAGATGTGGACTTTGTCTCTTCCTTTaGAATTTGGGAGGCCCCTGGCCTCCCAAAACGCTGGGATTACAG | + |
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Preference number: 6 (lower is better) Translates to: LSILRIDRCGLCLFL*NLGGPWPPKTLGLQ Trigger: CTGTAATCCCAGCGTTTTGGGAGGCCAGGGGCCTCCCAAATTCAAAAGGAAGAGACAAAGTCCACATCTGTCAATGCGAAGAATGGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372629.4 |
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| CDS CAA 90 bp | CTCCCTCCATCTCTGACTCTCCCTCCCTCTCTGACTTTCCTTCTTTaGCCTCTCCCTCACTCTCTGGCTTTCCTTTATCCTTTAACATTT | + |
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Preference number: 6 (lower is better) Translates to: LPPSLTLPPSLTFLL*PLPHSLAFLYPLTF Trigger: AAATGTTAAAGGATAAAGGAAAGCCAGAGAGTGAGGGAGAGGCAAAAGAAGGAAAGTCAGAGAGGGAGGGAGAGTCAGAGATGGAGGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000372629.4 ENST00000415568.2 ENST00000459722.1 ENST00000468024.5 ENST00000469586.1 ENST00000472484.6 ENST00000472745.1 ENST00000494801.5 |
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| CDS TCA 72 bp | TTTAATTTCCGAAGTTGTTATGTCCCGCTCCACATATaGTATGTGACCTTTCCATTCTTCGCATTGACAGAT | + |
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Preference number: 6 (lower is better) Translates to: FNFRSCYVPLHI*YVTFPFFALTD Trigger: ATCTGTCAATGCGAAGAATGGAAAGGTCACATATCATATGTGGAGCGGGACATAACAACTTCGGAAATTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372629.4 |
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