Pregenerated sensors for TCEAL3 (Homo sapiens)
Ensembl gene IDs: ENSG00000196507Ensembl transcript IDs: ENST00000372628.5, ENST00000477014.1
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCCTCGCGCCCCAGTCCCGGCCCACTGCGTACCCCTTCCCTGACCTaGACCTTTCCGGGCCGTGTGCTCCTAGTCGTCCTCTCCTCGAGG | + |
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Preference number: 5 (lower is better) Translates to: PSRPSPGPLRTPSLT*TFPGRVLLVVLSSR Trigger: CCTCGAGGAGAGGACGACTAGGAGCACACGGCCCGGAAAGGTCCAGGTCAGGGAAGGGGTACGCAGTGGGCCGGGACTGGGGCGCGAGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477014.1 |
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| CDS TCA 90 bp | CAAGGCCCCTTATTTCCCCTGCAGTTCAGATCCTGCACTGACGTTTaGCTGTTCACCTTCATAAATCAGTATTATATCCTTATATCCCAA | + |
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Preference number: 5 (lower is better) Translates to: QGPLFPLQFRSCTDV*LFTFINQYYILISQ Trigger: TTGGGATATAAGGATATAATACTGATTTATGAAGGTGAACAGTCAAACGTCAGTGCAGGATCTGAACTGCAGGGGAAATAAGGGGCCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477014.1 |
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| CDS GCA 72 bp | CCCCAGAACTCCAGAGCCCGCTTTCAAGACTGTCTCTaGCTGACTCCAGAGCCCAGGGTGGTGCTGCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PQNSRARFQDCL*LTPEPRVVLPA Trigger: GGCAGGCAGCACCACCCTGGGCTCTGGAGTCAGGCAGAGACAGTCTTGAAAGCGGGCTCTGGAGTTCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372628.5 |
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| CDS CCA 72 bp | GCTTCCTCATCTGCGGTCCCAGGTGGTCCAGTTCCTTaGGAGGCCGAGGTTAGAGGCCTGGGAACTCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: ASSSAVPGGPVP*EAEVRGLGTQG Trigger: GCCTTGAGTTCCCAGGCCTCTAACCTCGGCCTCCCAAGGAACTGGACCACCTGGGACCGCAGATGAGGAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477014.1 |
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| CDS CCA 72 bp | GTGGTCCAGTTCCTTGGGAGGCCGAGGTTAGAGGCCTaGGAACTCAAGGCTTCAGTGAGCCGTGATTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: VVQFLGRPRLEA*ELKASVSRDCA Trigger: GGCACAATCACGGCTCACTGAAGCCTTGAGTTCCCAGGCCTCTAACCTCGGCCTCCCAAGGAACTGGACCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477014.1 |
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| CDS CAA 72 bp | CCAGGTGTGACAGCTGATCAAAGAGGGTACCCGACTTaGCCAAGAGCGCTCAGCCCCAGAACTCCAGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: PGVTADQRGYPT*PRALSPRTPEP Trigger: GGGCTCTGGAGTTCTGGGGCTGAGCGCTCTTGGCAAAGTCGGGTACCCTCTTTGATCAGCTGTCACACCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372628.5 |
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| CDS CAA 90 bp | CCATTATCGCCAGGTGTGACAGCTGATCAAAGAGGGTACCCGACTTaGCCAAGAGCGCTCAGCCCCAGAACTCCAGAGCCCGCTTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: PLSPGVTADQRGYPT*PRALSPRTPEPAFK Trigger: CTTGAAAGCGGGCTCTGGAGTTCTGGGGCTGAGCGCTCTTGGCAAAGTCGGGTACCCTCTTTGATCAGCTGTCACACCTGGCGATAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372628.5 |
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| CDS GCA 72 bp | CTCCCTTCCTTAGCCACCAAGGCCCCTTATTTCCCCTaGAGTTCAGATCCTGCACTGACGTTTGACTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: LPSLATKAPYFP*SSDPALTFDCS Trigger: TGAACAGTCAAACGTCAGTGCAGGATCTGAACTGCAGGGGAAATAAGGGGCCTTGGTGGCTAAGGAAGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477014.1 |
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| CDS TCA 72 bp | TCCTGTAAGGACAGCTCACATGTTCAATACCTCATCTaGTCCACTGGGCAGTCCTGCAGGGATTCTGGACAG | + |
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Preference number: 6 (lower is better) Translates to: SCKDSSHVQYLI*STGQSCRDSGQ Trigger: CTGTCCAGAATCCCTGCAGGACTGCCCAGTGGATCAGATGAGGTATTGAACATGTGAGCTGTCCTTACAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477014.1 |
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| CDS CAA 72 bp | TTCAGTTCGAGACCTTTCATCCTTGACAGCTTAAAATaGCCACAGCTTCTATTCTGGTTCTTTCCCCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: FSSRPFILDSLK*PQLLFWFFPLP Trigger: TGGAAGGGGAAAGAACCAGAATAGAAGCTGTGGCAATTTTAAGCTGTCAAGGATGAAAGGTCTCGAACTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477014.1 |
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| CDS TCA 72 bp | TTATTTCCCCTGCAGTTCAGATCCTGCACTGACGTTTaGCTGTTCACCTTCATAAATCAGTATTATATCCTT | + |
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Preference number: 6 (lower is better) Translates to: LFPLQFRSCTDV*LFTFINQYYIL Trigger: AAGGATATAATACTGATTTATGAAGGTGAACAGTCAAACGTCAGTGCAGGATCTGAACTGCAGGGGAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477014.1 |
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| CDS CAA 72 bp | CATGTCCATTTAGGCTCATTCAGCATGTTTCATCTCTaGTCACTTTCATGGGAGACAATCTTTCACTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: HVHLGSFSMFHL*SLSWETIFHFF Trigger: GAAAAAGTGAAAGATTGTCTCCCATGAAAGTGACAAGAGATGAAACATGCTGAATGAGCCTAAATGGACATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477014.1 |
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| CDS CAA 90 bp | TATCTCCATCATGTCCATTTAGGCTCATTCAGCATGTTTCATCTCTaGTCACTTTCATGGGAGACAATCTTTCACTTTTTCTTGACATCA | + |
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Preference number: 6 (lower is better) Translates to: YLHHVHLGSFSMFHL*SLSWETIFHFFLTS Trigger: TGATGTCAAGAAAAAGTGAAAGATTGTCTCCCATGAAAGTGACAAGAGATGAAACATGCTGAATGAGCCTAAATGGACATGATGGAGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477014.1 |
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