RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TCEA3 (Homo sapiens)

Ensembl gene IDs: ENSG00000204219

Ensembl transcript IDs: ENST00000374601.7, ENST00000374602.2, ENST00000450454.7, ENST00000461794.1, ENST00000476978.2, ENST00000492271.1, ENST00000634793.1, ENST00000634832.1, ENST00000635035.2, ENST00000635356.1, ENST00000635366.1, ENST00000635497.2

Found 430 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGTCCTTAGAAAATCCTCCTGCCCCAGGTCTGAGTAGAGGCATCTaGAGGCCGGGCCCGCTGCTTCTGTGCGCCACCTCGAGGGCATTT +
Preference number: 1 (lower is better)
Translates to: QSLENPPAPGLSRGI*RPGPLLLCATSRAF
Trigger: AAATGCCCTCGAGGTGGCGCACAGAAGCAGCGGGCCCGGCCTCCAGATGCCTCTACTCAGACCTGGGGCAGGAGGATTTTCTAAGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR CCA 90 bp CTGAGCCAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTaGATTTATCAACAGCTTCCTTCTGCTCCCCGGATGTGCCCGCAC +
Preference number: 1 (lower is better)
Translates to: LSQTAERASSAGVGG*IYQQLPSAPRMCPH
Trigger: GTGCGGGCACATCCGGGGAGCAGAAGGAAGCTGTTGATAAATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR TCA 90 bp CAGGCAGCCACACTCATTTTGCTTTCAATGCACACGCCTGGGAACTaGGCCAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTT +
Preference number: 1 (lower is better)
Translates to: QAATLILLSMHTPGN*AKLQRGHHRPGWEV
Trigger: AACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTGGCTCAGTTCCCAGGCGTGTGCATTGAAAGCAAAATGAGTGTGGCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR CCA 90 bp AGCATTTCAGGCAGCCACACTCATTTTGCTTTCAATGCACACGCCTaGGAACTGAGCCAAACTGCAGAGAGGGCATCATCGGCCGGGGTG +
Preference number: 1 (lower is better)
Translates to: SISGSHTHFAFNAHA*ELSQTAERASSAGV
Trigger: CACCCCGGCCGATGATGCCCTCTCTGCAGTTTGGCTCAGTTCCCAGGCGTGTGCATTGAAAGCAAAATGAGTGTGGCTGCCTGAAATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR TCA 90 bp TGCACATGCAAGTCAGAGAGCAGTTGGAAACTGACAATAGGCACGTaGCCACACTCTGTTCCTTCAGGAGACTTGGCAGGAAGGAGCACT +
Preference number: 1 (lower is better)
Translates to: CTCKSESSWKLTIGT*PHSVPSGDLAGRST
Trigger: AGTGCTCCTTCCTGCCAAGTCTCCTGAAGGAACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCATGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR GCA 90 bp GTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTaGCTGGTGGCCCAGACATCACATGGTGCACATGCAAGTCAGAGA +
Preference number: 1 (lower is better)
Translates to: VLLAKYLRTFGAPAA*LVAQTSHGAHASQR
Trigger: TCTCTGACTTGCATGTGCACCATGTGATGTCTGGGCCACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR CCA 90 bp TTTCCCATCCTTGGCTGTGGCCAGGTTCAAAGGAAATACCATCTGTaGAAGCACTTTCCAAAGAGGCGTGGTCCAAGTGCAGAATGTTTT +
Preference number: 1 (lower is better)
Translates to: FPILGCGQVQRKYHL*KHFPKRRGPSAECF
Trigger: AAAACATTCTGCACTTGGACCACGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTTCCTTTGAACCTGGCCACAGCCAAGGATGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR CCA 90 bp TTGCTCAATGAGGTGAGTAACATGCTCAGCATGAGTAGGGCAGAATaGGACCTGAAACCAGGGATCCTGACTTATCTTGTACTTCTTGCT +
Preference number: 1 (lower is better)
Translates to: LLNEVSNMLSMSRAE*DLKPGILTYLVLLA
Trigger: AGCAAGAAGTACAAGATAAGTCAGGATCCCTGGTTTCAGGTCCCATTCTGCCCTACTCATGCTGAGCATGTTACTCACCTCATTGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR TCA 90 bp GTCTCCATTTTACAGATCAGTAGACTGAAGCTCAGAGAGCTGAACTaGATTATCCATCCAAGTTACTGCCCCAAGTTATCCATCCAACTA +
Preference number: 1 (lower is better)
Translates to: VSILQISRLKLRELN*IIHPSYCPKLSIQL
Trigger: TAGTTGGATGGATAACTTGGGGCAGTAACTTGGATGGATAATTCAGTTCAGCTCTCTGAGCTTCAGTCTACTGATCTGTAAAATGGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR-3UTR GCA 90 bp GGAACTGAGCCAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATGGAGGCCGGGCCCGCTaGTTCTGTGCGCCACCTCGA +
Preference number: 2 (lower is better)
Translates to: GTEPNCREGIIGRGGRLDGGRAR*FCAPPR
Trigger: TCGAGGTGGCGCACAGAAGCAGCGGGCCCGGCCTCC...ATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTGGCTCAGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR-3UTR CCA 90 bp CTGGTCCCGCCTCCCCGGTTAGGAGCTGGCTGGCTGGCTGGAATTCGTGTCTGGCTGAGTAGAGGCATCTaGAGGCCGGGCCCGCTGCTT +
Preference number: 2 (lower is better)
Translates to: LVPPPRLGAGWLAGIRVWLSRGI*RPGPLL
Trigger: AAGCAGCGGGCCCGGCCTCCAGATGCCTCTACTCAG...CCAGACACGAATTCCAGCCAGCCAGCCAGCTCCTAACCGGGGAGGCGGGACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR-3UTR GCA 90 bp GGAACTGAGCCAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATGGCCCGCTGCTTCTGTaGGCCACCTCGAGGGCATTT +
Preference number: 2 (lower is better)
Translates to: GTEPNCREGIIGRGGRLDGPLLL*ATSRAF
Trigger: AAATGCCCTCGAGGTGGCGCACAGAAGCAGCGGGCC...ATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTGGCTCAGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR-3UTR GCA 90 bp CAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATTTATCAACAGGGAGGCCGGGCCCGCTaGTTCTGTGCGCCACCTCGA +
Preference number: 2 (lower is better)
Translates to: QTAERASSAGVGGWIYQQGGRAR*FCAPPR
Trigger: TCGAGGTGGCGCACAGAAGCAGCGGGCCCGGCCTCC...CTGTTGATAAATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR CAA 90 bp ACTGAGCCAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTaGGATTTATCAACAGCTTCCTTCTGCTCCCCGGATGTGCCCGCA +
Preference number: 2 (lower is better)
Translates to: TEPNCREGIIGRGGR*DLSTASFCSPDVPA
Trigger: TGCGGGCACATCCGGGGAGCAGAAGGAAGCTGTTGATAAATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTGGCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR-3UTR TCA 90 bp CAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATTTATCAACAGCTCCTGCCCCAGGTCTaGGTAGAGGCATCTGGAGGC +
Preference number: 2 (lower is better)
Translates to: QTAERASSAGVGGWIYQQLLPQV*VEASGG
Trigger: GCCTCCAGATGCCTCTACTCAGACCTGGGGCAGGAG...CTGTTGATAAATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR-3UTR CCA 90 bp GAGTCCTCCTACCTGAGCAAGACTAGGCTGTTTGGAGCATTTCTTCCCACCTTCCTGAGTAGAGGCATCTaGAGGCCGGGCCCGCTGCTT +
Preference number: 2 (lower is better)
Translates to: ESSYLSKTRLFGAFLPTFLSRGI*RPGPLL
Trigger: AAGCAGCGGGCCCGGCCTCCAGATGCCTCTACTCAG...GAAGGTGGGAAGAAATGCTCCAAACAGCCTAGTCTTGCTCAGGTAGGAGGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR-3UTR GCA 90 bp AAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTAGGCTGTTTGGAGCAGGCCCGCTGCTTCTGTaGGCCACCTCGAGGGCATTT +
Preference number: 2 (lower is better)
Translates to: KERFPESSYLSKTRLFGAGPLLL*ATSRAF
Trigger: AAATGCCCTCGAGGTGGCGCACAGAAGCAGCGGGCC...TGCTCCAAACAGCCTAGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR-3UTR CCA 90 bp CTGGCTGGCTGGCTGGAATTCGTGTCTGGGCAGCATTTCAGGCAGCCACACTCATTCAATGCACACGCCTaGGAACTGAGCCAAACTGCA +
Preference number: 2 (lower is better)
Translates to: LAGWLEFVSGQHFRQPHSFNAHA*ELSQTA
Trigger: TGCAGTTTGGCTCAGTTCCCAGGCGTGTGCATTGAA...TGAGTGTGGCTGCCTGAAATGCTGCCCAGACACGAATTCCAGCCAGCCAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR-3UTR CCA 90 bp GAGTCCTCCTACCTGAGCAAGACTAGGCTGTTTGGAGCATTTCTTCCCACCTTCTCCCCGGTTAGGAGCTaGCTGGCTGGCTGGAATTCG +
Preference number: 2 (lower is better)
Translates to: ESSYLSKTRLFGAFLPTFSPVRS*LAGWNS
Trigger: CGAATTCCAGCCAGCCAGCCAGCTCCTAACCGGGGA...GAAGGTGGGAAGAAATGCTCCAAACAGCCTAGTCTTGCTCAGGTAGGAGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR-3UTR TCA 90 bp ACGAACCTGCCTGTCGCCCTTCCAAATTCTTTTCAACACATCAACTGTGTCTTTCTCCTGCCCCAGGTCTaGGTAGAGGCATCTGGAGGC +
Preference number: 2 (lower is better)
Translates to: TNLPVALPNSFQHINCVFLLPQV*VEASGG
Trigger: GCCTCCAGATGCCTCTACTCAGACCTGGGGCAGGAG...AAAGACACAGTTGATGTGTTGAAAAGAATTTGGAAGGGCGACAGGCAGGTTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR-3UTR CCA 90 bp AAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTAGGCTGTTTGGAGCAGCTGGAATTCGTGTCTaGGCAGCATTTCAGGCAGCC +
Preference number: 2 (lower is better)
Translates to: KERFPESSYLSKTRLFGAAGIRV*AAFQAA
Trigger: GGCTGCCTGAAATGCTGCCCAGACACGAATTCCAGC...TGCTCCAAACAGCCTAGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR-3UTR CCA 90 bp CTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGGCCCAGACATGGAAGGATGGCCTGGTaGCATTTAGGTTCAACTCCT +
Preference number: 2 (lower is better)
Translates to: LSTLELLEHLQPAWWPRHGRMAW*HLGSTP
Trigger: AGGAGTTGAACCTAAATGCCACCAGGCCATCCTTCC...ATGTCTGGGCCACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR-3UTR CCA 90 bp GAGTCCTCCTACCTGAGCAAGACTAGGCTGTTTGGAGCATTTCTTCCCACCTTCTTCAATGCACACGCCTaGGAACTGAGCCAAACTGCA +
Preference number: 2 (lower is better)
Translates to: ESSYLSKTRLFGAFLPTFFNAHA*ELSQTA
Trigger: TGCAGTTTGGCTCAGTTCCCAGGCGTGTGCATTGAA...GAAGGTGGGAAGAAATGCTCCAAACAGCCTAGTCTTGCTCAGGTAGGAGGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR-3UTR CCA 90 bp ACGAACCTGCCTGTCGCCCTTCCAAATTCTTTTCAACACATCAACTGTGTCTTTAGCTGGCTGGCTGGCTaGAATTCGTGTCTGGGCAGC +
Preference number: 2 (lower is better)
Translates to: TNLPVALPNSFQHINCVFSWLAG*NSCLGS
Trigger: GCTGCCCAGACACGAATTCCAGCCAGCCAGCCAGCT...AAAGACACAGTTGATGTGTTGAAAAGAATTTGGAAGGGCGACAGGCAGGTTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR-3UTR CCA 90 bp TTGGAAACTGACAATAGGCACGTGACCACACTCTGTTCCTTCAGGAGACTTGGCCCTGTTTCCCATCCTTaGCTGTGGCCAGGTTCAAAG +
Preference number: 2 (lower is better)
Translates to: LETDNRHVTTLCSFRRLGPVSHP*LWPGSK
Trigger: CTTTGAACCTGGCCACAGCCAAGGATGGGAAACAGG...GCCAAGTCTCCTGAAGGAACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR-3UTR CCA 90 bp GTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGTGCCTTTGCAGGAGCTaGGGCAGTCTGAGTTACAGA +
Preference number: 2 (lower is better)
Translates to: VLLAKYLRTFGAPAACLVCLCRS*GSLSYR
Trigger: TCTGTAACTCAGACTGCCCCAGCTCCTGCAAAGGCA...CACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR-3UTR TCA 90 bp ACGAACCTGCCTGTCGCCCTTCCAAATTCTTTTCAACACATCAACTGTGTCTTTCAGAGTCCTCCTACCTaGGCAAGACTAGGCTGTTTG +
Preference number: 2 (lower is better)
Translates to: TNLPVALPNSFQHINCVFQSPPT*ARLGCL
Trigger: CAAACAGCCTAGTCTTGCTCAGGTAGGAGGACTCTG...AAAGACACAGTTGATGTGTTGAAAAGAATTTGGAAGGGCGACAGGCAGGTTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR-3UTR GCA 90 bp AAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTAGGCTGTTTGGAGCATCATTTTGCTTTCAATaGACACGCCTGGGAACTGAG +
Preference number: 2 (lower is better)
Translates to: KERFPESSYLSKTRLFGASFCFQ*TRLGTE
Trigger: CTCAGTTCCCAGGCGTGTGCATTGAAAGCAAAATGA...TGCTCCAAACAGCCTAGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR-3UTR GCA 90 bp TTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGGCCCTTTGTTTGGCTCCCATaGGTGAAAACAAAACTTCTG +
Preference number: 2 (lower is better)
Translates to: FLLSTLELLEHLQPAWWPFVWLP*VKTKLL
Trigger: CAGAAGTTTTGTTTTCACGCATGGGAGCCAAACAAA...GGGCCACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR-3UTR CCA 90 bp CCTGTTTCCCATCCTTGGCTGTGGCCAGGTTCAAAGGAAATACCATCTGTGGAACTTTCCAAAGAGGCGTaGTCCAAGTGCAGAATGTTT +
Preference number: 2 (lower is better)
Translates to: PVSHPWLWPGSKEIPSVELSKEA*SKCRMF
Trigger: AAACATTCTGCACTTGGACCACGCCTCTTTGGAAAG...TTCCACAGATGGTATTTCCTTTGAACCTGGCCACAGCCAAGGATGGGAAACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR-3UTR CCA 90 bp TTGGAAACTGACAATAGGCACGTGACCACACTCTGTTCCTTCAGGAGACTTGGCCTTTCCAAAGAGGCGTaGTCCAAGTGCAGAATGTTT +
Preference number: 2 (lower is better)
Translates to: LETDNRHVTTLCSFRRLGLSKEA*SKCRMF
Trigger: AAACATTCTGCACTTGGACCACGCCTCTTTGGAAAG...GCCAAGTCTCCTGAAGGAACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR-3UTR CCA 90 bp GTGAGTAACATGCTCAGCATGAGTAGGGCAGAATGGGACCTGAAACCAGGGATCTCTGAGTTACAGACTTaGGTAAGACTTTCAGAGCTT +
Preference number: 2 (lower is better)
Translates to: VSNMLSMSRAEWDLKPGISELQT*VRLSEL
Trigger: AAGCTCTGAAAGTCTTACCCAAGTCTGTAACTCAGA...GATCCCTGGTTTCAGGTCCCATTCTGCCCTACTCATGCTGAGCATGTTACTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR-3UTR GCA 90 bp CTGACTTATCTTGTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCACAAAACTTCTGCCTTTaGAGGAGCTGGGGCAGTCTG +
Preference number: 2 (lower is better)
Translates to: LTYLVLLAKYLRTFGAPAQNFCL*RSWGSL
Trigger: CAGACTGCCCCAGCTCCTGCAAAGGCAGAAGTTTTG...TGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTACAAGATAAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR-3UTR CCA 90 bp ATGCAAGTCAGAGAGCAGTTGGAAACTGACAATAGGCACGTGACCACACTCTGTAGGAAATACCATCTGTaGAAGCACTTTCCAAAGAGG +
Preference number: 2 (lower is better)
Translates to: MQVREQLETDNRHVTTLCRKYHL*KHFPKR
Trigger: CCTCTTTGGAAAGTGCTTCCACAGATGGTATTTCCT...ACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR-3UTR CCA 90 bp GTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGTCTGAGTTACAGACTTaGGTAAGACTTTCAGAGCTT +
Preference number: 2 (lower is better)
Translates to: VLLAKYLRTFGAPAACLVSELQT*VRLSEL
Trigger: AAGCTCTGAAAGTCTTACCCAAGTCTGTAACTCAGA...CACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR-3UTR TCA 90 bp AAACCAGGGATCCTGACTTATCTTGTACTTCTTGCTAAGTACCTTAGAACTTTTCTGACAATAGGCACGTaGCCACACTCTGTTCCTTCA +
Preference number: 2 (lower is better)
Translates to: KPGILTYLVLLAKYLRTFLTIGT*PHSVPS
Trigger: TGAAGGAACAGAGTGTGGTCACGTGCCTATTGTCAG...AAAAGTTCTAAGGTACTTAGCAAGAAGTACAAGATAAGTCAGGATCCCTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR-3UTR CCA 90 bp AAACCAGGGATCCTGACTTATCTTGTACTTCTTGCTAAGTACCTTAGAACTTTTAAGTCAGAGAGCAGTTaGAAACTGACAATAGGCACG +
Preference number: 2 (lower is better)
Translates to: KPGILTYLVLLAKYLRTFKSESS*KLTIGT
Trigger: CGTGCCTATTGTCAGTTTCCAACTGCTCTCTGACTT...AAAAGTTCTAAGGTACTTAGCAAGAAGTACAAGATAAGTCAGGATCCCTGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR CCA 72 bp GGTCCCGCCTCCCCGGTTAGGAGCTGGCTGGCTGGCTaGAATTCGTGTCTGGGCAGCATTTCAGGCAGCCAC +
Preference number: 3 (lower is better)
Translates to: GPASPVRSWLAG*NSCLGSISGSH
Trigger: GTGGCTGCCTGAAATGCTGCCCAGACACGAATTCCAGCCAGCCAGCCAGCTCCTAACCGGGGAGGCGGGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR CCA 72 bp CCAGCCCTGGTCCCGCCTCCCCGGTTAGGAGCTGGCTaGCTGGCTGGAATTCGTGTCTGGGCAGCATTTCAG +
Preference number: 3 (lower is better)
Translates to: PALVPPPRLGAG*LAGIRVWAAFQ
Trigger: CTGAAATGCTGCCCAGACACGAATTCCAGCCAGCCAGCCAGCTCCTAACCGGGGAGGCGGGACCAGGGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR CCA 72 bp GGCAGCCACACTCATTTTGCTTTCAATGCACACGCCTaGGAACTGAGCCAAACTGCAGAGAGGGCATCATCG +
Preference number: 3 (lower is better)
Translates to: GSHTHFAFNAHA*ELSQTAERASS
Trigger: CGATGATGCCCTCTCTGCAGTTTGGCTCAGTTCCCAGGCGTGTGCATTGAAAGCAAAATGAGTGTGGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR CCA 72 bp ACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTaGCCCAGACATCACATGGTGCACATGCAAGTCAGA +
Preference number: 3 (lower is better)
Translates to: TLELLEHLQPAW*PRHHMVHMQVR
Trigger: TCTGACTTGCATGTGCACCATGTGATGTCTGGGCCACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR-3UTR CAA 90 bp CGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGGTCTAAGGCGCTGCAGTTTCTTCTTCCTCACCTaGTTCATGGCTGGCTGTTCC +
Preference number: 3 (lower is better)
Translates to: RLPAHCQRYDTSGLRRCSFFFLT*FMAGCS
Trigger: GGAACAGCCAGCCATGAACAAGGTGAGGAAGAAGAA...ACTGCAGCGCCTTAGACCTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
3UTR CCA 72 bp CTTGGCTGTGGCCAGGTTCAAAGGAAATACCATCTGTaGAAGCACTTTCCAAAGAGGCGTGGTCCAAGTGCA +
Preference number: 3 (lower is better)
Translates to: LGCGQVQRKYHL*KHFPKRRGPSA
Trigger: TGCACTTGGACCACGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTTCCTTTGAACCTGGCCACAGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR-3UTR CAA 90 bp ACGAACCTGCCTGTCGCCCTTCCAAATTCTTTTCAACACATCAACTGTGTCTTTGGCCGGGGTGGGAGGTaGGATTTATCAACAGCTTCC +
Preference number: 3 (lower is better)
Translates to: TNLPVALPNSFQHINCVFGRGGR*DLSTAS
Trigger: GGAAGCTGTTGATAAATCCAACCTCCCACCCCGGCC...AAAGACACAGTTGATGTGTTGAAAAGAATTTGGAAGGGCGACAGGCAGGTTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR-3UTR CAA 90 bp AAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTAGGCTGTTTGGAGCAGCAGCCACACTCATTTaGCTTTCAATGCACACGCCT +
Preference number: 3 (lower is better)
Translates to: KERFPESSYLSKTRLFGAAATLI*LSMHTP
Trigger: AGGCGTGTGCATTGAAAGCAAAATGAGTGTGGCTGC...TGCTCCAAACAGCCTAGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR-3UTR CAA 90 bp ATGCAAGTCAGAGAGCAGTTGGAAACTGACAATAGGCACGTGACCACACTCTGTGGGAGGAGTCTTTGTTaGGCTCCCATGCGTGAAAAC +
Preference number: 3 (lower is better)
Translates to: MQVREQLETDNRHVTTLCGRSLC*APMREN
Trigger: GTTTTCACGCATGGGAGCCAAACAAAGACTCCTCCC...ACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR TCA 72 bp AAGTCAGAGAGCAGTTGGAAACTGACAATAGGCACGTaGCCACACTCTGTTCCTTCAGGAGACTTGGCAGGA +
Preference number: 3 (lower is better)
Translates to: KSESSWKLTIGT*PHSVPSGDLAG
Trigger: TCCTGCCAAGTCTCCTGAAGGAACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAACTGCTCTCTGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR GCA 72 bp ATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTaGCAGCCCACTGTCAAAGATATGACACCTCAGGTC +
Preference number: 3 (lower is better)
Translates to: IQMGEKELKANV*QPTVKDMTPQV
Trigger: GACCTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
3UTR CCA 72 bp GAGGTGAGTAACATGCTCAGCATGAGTAGGGCAGAATaGGACCTGAAACCAGGGATCCTGACTTATCTTGTA +
Preference number: 3 (lower is better)
Translates to: EVSNMLSMSRAE*DLKPGILTYLV
Trigger: TACAAGATAAGTCAGGATCCCTGGTTTCAGGTCCCATTCTGCCCTACTCATGCTGAGCATGTTACTCACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR-3UTR CAA 90 bp TCAACTGTGTCTTTAAAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTGCAGCCACACTCATTTaGCTTTCAATGCACACGCCT +
Preference number: 3 (lower is better)
Translates to: STVSLKERFPESSYLSKTAATLI*LSMHTP
Trigger: AGGCGTGTGCATTGAAAGCAAAATGAGTGTGGCTGC...AGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTTTAAAGACACAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
3UTR TCA 72 bp TCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATaGCACCTCAGGTCTAAGGCGCTGCAGTTTCTTTAT +
Preference number: 3 (lower is better)
Translates to: SKQTSASPLSKI*HLRSKALQFLY
Trigger: ATAAAGAAACTGCAGCGCCTTAGACCTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
3UTR-3UTR CAA 90 bp AAACCAGGGATCCTGACTTATCTTGTACTTCTTGCTAAGTACCTTAGAACTTTTGTTCCTTCAGGAGACTaGGCAGGAAGGAGCACTCTG +
Preference number: 3 (lower is better)
Translates to: KPGILTYLVLLAKYLRTFVPSGD*AGRSTL
Trigger: CAGAGTGCTCCTTCCTGCCAAGTCTCCTGAAGGAAC...AAAAGTTCTAAGGTACTTAGCAAGAAGTACAAGATAAGTCAGGATCCCTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR-3UTR CAA 90 bp TCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATTCTCCAATTAGGCTCCTTCTTCTTCCTCACCTaGTTCATGGCTGGCTGTTCC +
Preference number: 3 (lower is better)
Translates to: SKRGSSIQILSIILQLGSFFFLT*FMAGCS
Trigger: GGAACAGCCAGCCATGAACAAGGTGAGGAAGAAGAA...GGAGCCTAATTGGAGAATGATGCTGAGAATTTGTATTGATGAACCTCTTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
3UTR-3UTR CAA 90 bp GCAAAGTGTTTATGCATACATGATAACCCTCATATCAAAATGATCCTCACATCATCCTGTTTCCCATCCTaGGCTGTGGCCAGGTTCAAA +
Preference number: 3 (lower is better)
Translates to: AKCLCIHDNPHIKMILTSSCFPS*AVARFK
Trigger: TTTGAACCTGGCCACAGCCAAGGATGGGAAACAGGA...TGATGTGAGGATCATTTTGATATGAGGGTTATCATGTATGCATAAACACTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR-3UTR CAA 90 bp AACCACCGTGCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTTCCCCCATTAACCAATaGTTTCTAATGACCGATTAT +
Preference number: 3 (lower is better)
Translates to: NHRAQPSAVSKRGSSIQISPINQ*FLMTDY
Trigger: ATAATCGGTCATTAGAAACAATTGGTTAATGGGGGA...AATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGCACGGTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
3UTR TCA 72 bp AGTGTTTATGCATACATGATAACCCTCATATCAAAATaGTCCTCACATCATCAAACCTGGGAGAAAGGCATT +
Preference number: 3 (lower is better)
Translates to: SVYAYMITLISK*SSHHQTWEKGI
Trigger: AATGCCTTTCTCCCAGGTTTGATGATGTGAGGATCATTTTGATATGAGGGTTATCATGTATGCATAAACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp GTTGCCTGGGCTGGACTCAAACTTCTGGGGTTAAGCGATTCTCCCACCTCAGCCCTTCCTGGCCCATGTTaGCCCGCGACGCCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: VAWAGLKLLGLSDSPTSALPGPC*PATPGG
Trigger: CCCGCCGGGCGTCGCGGGCCAACATGGGCCAGGAAG...GGCTGAGGTGGGAGAATCGCTTAACCCCAGAAGTTTGAGTCCAGCCCAGGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp CTGGTCCCGCCTCCCCGGTTAGGAGCTGGCTGGCTGGCTGGAATTCGTGTCTGGAGCTGGCTGGCTGGCTaGAATTCGTGTCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LVPPPRLGAGWLAGIRVWSWLAG*NSCLGS
Trigger: GCTGCCCAGACACGAATTCCAGCCAGCCAGCCAGCT...CCAGACACGAATTCCAGCCAGCCAGCCAGCTCCTAACCGGGGAGGCGGGACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp CAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATTTATCAACAGCTTCCTGGCCCATGTTaGCCCGCGACGCCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: QTAERASSAGVGGWIYQQLPGPC*PATPGG
Trigger: CCCGCCGGGCGTCGCGGGCCAACATGGGCCAGGAAG...CTGTTGATAAATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR TCA 90 bp GGAACTGAGCCAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATCTCCTGCCCCAGGTCTaGGTAGAGGCATCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GTEPNCREGIIGRGGRLDLLPQV*VEASGG
Trigger: GCCTCCAGATGCCTCTACTCAGACCTGGGGCAGGAG...ATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTGGCTCAGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp GGAACTGAGCCAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATAGCAGCTCCTCTTCCTaGCCCATGTTGGCCCGCGAC +
Preference number: 4 (lower is better)
Translates to: GTEPNCREGIIGRGGRLDSSSSS*PMLARD
Trigger: GTCGCGGGCCAACATGGGCCAGGAAGAGGAGCTGCT...ATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTGGCTCAGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp CTGGTCCCGCCTCCCCGGTTAGGAGCTGGCTGGCTGGCTGGAATTCGTGTCTGGAGGAGGCAGAAGACTTaGAGTCCACAGAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LVPPPRLGAGWLAGIRVWRRQKT*SPQSLS
Trigger: GGAGAGACTCTGTGGACTCCAAGTCTTCTGCCTCCT...CCAGACACGAATTCCAGCCAGCCAGCCAGCTCCTAACCGGGGAGGCGGGACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR TCA 90 bp GTTGCCTGGGCTGGACTCAAACTTCTGGGGTTAAGCGATTCTCCCACCTCAGCCCACCACCTCCTTGTCTaGGCAGTGCTTGCGGACCCC +
Preference number: 4 (lower is better)
Translates to: VAWAGLKLLGLSDSPTSAHHLLV*AVLADP
Trigger: GGGGTCCGCAAGCACTGCTCAGACAAGGAGGTGGTG...GGCTGAGGTGGGAGAATCGCTTAACCCCAGAAGTTTGAGTCCAGCCCAGGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp GCCAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATTTATCAACGGCCCGCTGCTTCTGTaGGCCACCTCGAGGGCATTT +
Preference number: 4 (lower is better)
Translates to: AKLQRGHHRPGWEVGFINGPLLL*ATSRAF
Trigger: AAATGCCCTCGAGGTGGCGCACAGAAGCAGCGGGCC...GTTGATAAATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR GCA 90 bp GAGTCCTCCTACCTGAGCAAGACTAGGCTGTTTGGAGCATTTCTTCCCACCTTCGGAGGCCGGGCCCGCTaGTTCTGTGCGCCACCTCGA +
Preference number: 4 (lower is better)
Translates to: ESSYLSKTRLFGAFLPTFGGRAR*FCAPPR
Trigger: TCGAGGTGGCGCACAGAAGCAGCGGGCCCGGCCTCC...GAAGGTGGGAAGAAATGCTCCAAACAGCCTAGTCTTGCTCAGGTAGGAGGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp ACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGGTCTACTTCCTGGCCCATGTTaGCCCGCGACGCCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: TQSKRLPAHCQRYDTSGLLPGPC*PATPGG
Trigger: CCCGCCGGGCGTCGCGGGCCAACATGGGCCAGGAAG...TAGACCTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp CAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATTTATCAACAGCTGAGTAGAGGCATCTaGAGGCCGGGCCCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: QTAERASSAGVGGWIYQQLSRGI*RPGPLL
Trigger: AAGCAGCGGGCCCGGCCTCCAGATGCCTCTACTCAG...CTGTTGATAAATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR TCA 90 bp CGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGGTCTAAGGCGCTGCAGTGGTTCCTGGGGTCCTTaGGGTTGCTTATGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: RLPAHCQRYDTSGLRRCSGSWGP*GCLCGC
Trigger: GCAGCCGCATAAGCAACCTCAAGGACCCCAGGAACC...ACTGCAGCGCCTTAGACCTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp GGAACTGAGCCAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATAGCTGGATGGACATCTaGCAGCTGTGCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GTEPNCREGIIGRGGRLDSWMDI*QLCSFF
Trigger: GAAGAAGCTGCACAGCTGCCAGATGTCCATCCAGCT...ATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTGGCTCAGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp GGAACTGAGCCAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATCTTCCGTGTTCTTCCTaGCCACCATCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GTEPNCREGIIGRGGRLDLPCSS*PPSSPA
Trigger: AGCTGGAGAAGATGGTGGCCAGGAAGAACACGGAAG...ATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTGGCTCAGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR TCA 90 bp GCAGCATTTCAGGCAGCCACACTCATTTTGCTTTCAATGCACACGCCTGGGAACCACCACCTCCTTGTCTaGGCAGTGCTTGCGGACCCC +
Preference number: 4 (lower is better)
Translates to: AAFQAATLILLSMHTPGNHHLLV*AVLADP
Trigger: GGGGTCCGCAAGCACTGCTCAGACAAGGAGGTGGTG...GTTCCCAGGCGTGTGCATTGAAAGCAAAATGAGTGTGGCTGCCTGAAATGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR GCA 90 bp GAGTCCTCCTACCTGAGCAAGACTAGGCTGTTTGGAGCATTTCTTCCCACCTTCGGCCCGCTGCTTCTGTaGGCCACCTCGAGGGCATTT +
Preference number: 4 (lower is better)
Translates to: ESSYLSKTRLFGAFLPTFGPLLL*ATSRAF
Trigger: AAATGCCCTCGAGGTGGCGCACAGAAGCAGCGGGCC...GAAGGTGGGAAGAAATGCTCCAAACAGCCTAGTCTTGCTCAGGTAGGAGGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR GCA 90 bp GTGAGTAACATGCTCAGCATGAGTAGGGCAGAATGGGACCTGAAACCAGGGATCGGAGCACCTGCAGCCTaGCTGGTGGCCCAGACATCA +
Preference number: 4 (lower is better)
Translates to: VSNMLSMSRAEWDLKPGIGAPAA*LVAQTS
Trigger: TGATGTCTGGGCCACCAGGCAGGCTGCAGGTGCTCC...GATCCCTGGTTTCAGGTCCCATTCTGCCCTACTCATGCTGAGCATGTTACTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp GGAACTGAGCCAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATCACCGATGGTCTTTTTaGAGAGGAGGAGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: GTEPNCREGIIGRGGRLDHRWSF*RGGGRR
Trigger: TCTTCTGCCTCCTCCTCTCCAAAAAGACCATCGGTG...ATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTGGCTCAGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp TCAACTGTGTCTTTAAAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTCTTCCTGGCCCATGTTaGCCCGCGACGCCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: STVSLKERFPESSYLSKTLPGPC*PATPGG
Trigger: CCCGCCGGGCGTCGCGGGCCAACATGGGCCAGGAAG...AGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTTTAAAGACACAGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp GAGTCCTCCTACCTGAGCAAGACTAGGCTGTTTGGAGCATTTCTTCCCACCTTCAGCAGCTCCTCTTCCTaGCCCATGTTGGCCCGCGAC +
Preference number: 4 (lower is better)
Translates to: ESSYLSKTRLFGAFLPTFSSSSS*PMLARD
Trigger: GTCGCGGGCCAACATGGGCCAGGAAGAGGAGCTGCT...GAAGGTGGGAAGAAATGCTCCAAACAGCCTAGTCTTGCTCAGGTAGGAGGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp CGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGGTCTAAGGCGCTGCAGTTCTGGTGCTCACGGATaGCCTCCTGGGTCATGGCAT +
Preference number: 4 (lower is better)
Translates to: RLPAHCQRYDTSGLRRCSSGAHG*PPGSWH
Trigger: ATGCCATGACCCAGGAGGCCATCCGTGAGCACCAGA...ACTGCAGCGCCTTAGACCTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp CGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGGTCTAAGGCGCTGCAGTCGTGTGACTCGGAGGTaGGGGTGGGGTAAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: RLPAHCQRYDTSGLRRCSRVTRR*GWGKVC
Trigger: ACAAACCTTACCCCACCCCCACCTCCGAGTCACACG...ACTGCAGCGCCTTAGACCTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp TTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGGCCCCTGCAGCCTGCCTGGTaGCCCAGACATCACATGGTG +
Preference number: 4 (lower is better)
Translates to: FLLSTLELLEHLQPAWWPLQPAW*PRHHMV
Trigger: CACCATGTGATGTCTGGGCCACCAGGCAGGCTGCAG...GGGCCACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR CAA 72 bp AACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTaGGATTTATCAACAGCTTCCTTCTGCTCCCCGGAT +
Preference number: 4 (lower is better)
Translates to: NCREGIIGRGGR*DLSTASFCSPD
Trigger: ATCCGGGGAGCAGAAGGAAGCTGTTGATAAATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR TCA 90 bp CTGTGGCCAGGTTCAAAGGAAATACCATCTGTGGAAGCACTTTCCAAAGAGGCGCACCACCTCCTTGTCTaGGCAGTGCTTGCGGACCCC +
Preference number: 4 (lower is better)
Translates to: LWPGSKEIPSVEALSKEAHHLLV*AVLADP
Trigger: GGGGTCCGCAAGCACTGCTCAGACAAGGAGGTGGTG...CGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTTCCTTTGAACCTGGCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR TCA 90 bp CTGTGGCCAGGTTCAAAGGAAATACCATCTGTGGAAGCACTTTCCAAAGAGGCGGGACAGAGTCCCCTGTaGGATAGCAGGGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LWPGSKEIPSVEALSKEAGQSPL*DSRGPG
Trigger: TCCTGGCCCCCTGCTATCTCACAGGGGACTCTGTCC...CGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTTCCTTTGAACCTGGCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR TCA 90 bp TGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCAGCCCACTCGCCTTCAGGGCTGCTaGCAGCATCTCCACACACTT +
Preference number: 4 (lower is better)
Translates to: WEIQMGEKELKANVCQPTRLQGC*QHLHTL
Trigger: AAGTGTGTGGAGATGCTGTCAGCAGCCCTGAAGGCG...AGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp GGAACTGAGCCAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATGGGCATTTCAGTTACTaGATCAGCGAGCATGCTCTT +
Preference number: 4 (lower is better)
Translates to: GTEPNCREGIIGRGGRLDGHFSY*ISEHAL
Trigger: AAGAGCATGCTCGCTGATGCAGTAACTGAAATGCCC...ATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTGGCTCAGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR GCA 90 bp ACGAACCTGCCTGTCGCCCTTCCAAATTCTTTTCAACACATCAACTGTGTCTTTGGAGGCCGGGCCCGCTaGTTCTGTGCGCCACCTCGA +
Preference number: 4 (lower is better)
Translates to: TNLPVALPNSFQHINCVFGGRAR*FCAPPR
Trigger: TCGAGGTGGCGCACAGAAGCAGCGGGCCCGGCCTCC...AAAGACACAGTTGATGTGTTGAAAAGAATTTGGAAGGGCGACAGGCAGGTTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR GCA 90 bp TTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGGCCCCTTGGCTATAAGCCCTaGGGAGATGGCCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: FLLSTLELLEHLQPAWWPLGYKP*GDGPTE
Trigger: CTCAGTGGGGCCATCTCCGCAGGGCTTATAGCCAAG...GGGCCACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp CTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGGCCCAGACATCTTGGCTATAAGCCCTaGGGAGATGGCCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: LSTLELLEHLQPAWWPRHLGYKP*GDGPTE
Trigger: CTCAGTGGGGCCATCTCCGCAGGGCTTATAGCCAAG...ATGTCTGGGCCACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp CTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGGCCCAGACATAACTTTTGGAGCACCTaGAGCCTGCCTGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LSTLELLEHLQPAWWPRHNFWST*SLPGGP
Trigger: TGGGCCACCAGGCAGGCTGCAGGTGCTCCAAAAGTT...ATGTCTGGGCCACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp GTTGCCTGGGCTGGACTCAAACTTCTGGGGTTAAGCGATTCTCCCACCTCAGCCCTTCCGTGTTCTTCCTaGCCACCATCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VAWAGLKLLGLSDSPTSALPCSS*PPSSPA
Trigger: AGCTGGAGAAGATGGTGGCCAGGAAGAACACGGAAG...GGCTGAGGTGGGAGAATCGCTTAACCCCAGAAGTTTGAGTCCAGCCCAGGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp GCAGCATTTCAGGCAGCCACACTCATTTTGCTTTCAATGCACACGCCTGGGAACTCCCCGGTTAGGAGCTaGCTGGCTGGCTGGAATTCG +
Preference number: 4 (lower is better)
Translates to: AAFQAATLILLSMHTPGNSPVRS*LAGWNS
Trigger: CGAATTCCAGCCAGCCAGCCAGCTCCTAACCGGGGA...GTTCCCAGGCGTGTGCATTGAAAGCAAAATGAGTGTGGCTGCCTGAAATGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp CGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGGTCTAAGGCGCTGCAGTTGGCCTCCTGGGTCATaGCATTCCTCAACTCCCTCA +
Preference number: 4 (lower is better)
Translates to: RLPAHCQRYDTSGLRRCSWPPGS*HSSTPS
Trigger: TGAGGGAGTTGAGGAATGCCATGACCCAGGAGGCCA...ACTGCAGCGCCTTAGACCTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp TGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCAGCCCACTACTGGAAGAGGTCAGTaGTGGTGCCGCCAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: WEIQMGEKELKANVCQPTTGRGQ*WCRQSW
Trigger: CCAAGACTGGCGGCACCACCACTGACCTCTTCCAGT...AGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR TCA 90 bp GTGTCTTTAAAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTAGGCTGCACCACCTCCTTGTCTaGGCAGTGCTTGCGGACCCC +
Preference number: 4 (lower is better)
Translates to: VSLKERFPESSYLSKTRLHHLLV*AVLADP
Trigger: GGGGTCCGCAAGCACTGCTCAGACAAGGAGGTGGTG...CAGCCTAGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTTTAAAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR TCA 90 bp CAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATTTATCAACAGCAGAGTCCTCCTACCTaGGCAAGACTAGGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: QTAERASSAGVGGWIYQQQSPPT*ARLGCL
Trigger: CAAACAGCCTAGTCTTGCTCAGGTAGGAGGACTCTG...CTGTTGATAAATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR TCA 90 bp GACATCACATGGTGCACATGCAAGTCAGAGAGCAGTTGGAAACTGACAATAGGCGGACAGAGTCCCCTGTaGGATAGCAGGGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: DITWCTCKSESSWKLTIGGQSPL*DSRGPG
Trigger: TCCTGGCCCCCTGCTATCTCACAGGGGACTCTGTCC...GCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCATGTGCACCATGTGATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp GAAAAGGCTGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCCTTGGCTATAAGCCCTaGGGAGATGGCCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: EKAGRSRWERRNSKQTSALGYKP*GDGPTE
Trigger: CTCAGTGGGGCCATCTCCGCAGGGCTTATAGCCAAG...GGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCAGCCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp TTGTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGGGAGCACCTGCAGCCTaGCTGGTGGCCCAGACATCA +
Preference number: 4 (lower is better)
Translates to: LYFLLSTLELLEHLQPAWGAPAA*LVAQTS
Trigger: TGATGTCTGGGCCACCAGGCAGGCTGCAGGTGCTCC...CCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp CAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATTTATCAACAGAGCTGGATGGACATCTaGCAGCTGTGCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: QTAERASSAGVGGWIYQQSWMDI*QLCSFF
Trigger: GAAGAAGCTGCACAGCTGCCAGATGTCCATCCAGCT...CTGTTGATAAATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp GCCAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATTTATCAACCACCGATGGTCTTTTTaGAGAGGAGGAGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: AKLQRGHHRPGWEVGFINHRWSF*RGGGRR
Trigger: TCTTCTGCCTCCTCCTCTCCAAAAAGACCATCGGTG...GTTGATAAATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp ACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGGTCTAAGCAGCTCCTCTTCCTaGCCCATGTTGGCCCGCGAC +
Preference number: 4 (lower is better)
Translates to: TQSKRLPAHCQRYDTSGLSSSSS*PMLARD
Trigger: GTCGCGGGCCAACATGGGCCAGGAAGAGGAGCTGCT...TAGACCTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp GCAGCATTTCAGGCAGCCACACTCATTTTGCTTTCAATGCACACGCCTGGGAACCGGTTAGGAGCTGGCTaGCTGGCTGGAATTCGTGTC +
Preference number: 4 (lower is better)
Translates to: AAFQAATLILLSMHTPGNRLGAG*LAGIRV
Trigger: GACACGAATTCCAGCCAGCCAGCCAGCTCCTAACCG...GTTCCCAGGCGTGTGCATTGAAAGCAAAATGAGTGTGGCTGCCTGAAATGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp GAGTCCTCCTACCTGAGCAAGACTAGGCTGTTTGGAGCATTTCTTCCCACCTTCCGGTTAGGAGCTGGCTaGCTGGCTGGAATTCGTGTC +
Preference number: 4 (lower is better)
Translates to: ESSYLSKTRLFGAFLPTFRLGAG*LAGIRV
Trigger: GACACGAATTCCAGCCAGCCAGCCAGCTCCTAACCG...GAAGGTGGGAAGAAATGCTCCAAACAGCCTAGTCTTGCTCAGGTAGGAGGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp TTGGAAACTGACAATAGGCACGTGACCACACTCTGTTCCTTCAGGAGACTTGGCGGGCCAGGAGACACATaGAAGAGGCAAACGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LETDNRHVTTLCSFRRLGGPGDT*KRQTWG
Trigger: CCCCCACGTTTGCCTCTTCCATGTGTCTCCTGGCCC...GCCAAGTCTCCTGAAGGAACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp CTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGGCCCAGACATTGGCCTCCTGGGTCATaGCATTCCTCAACTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LSTLELLEHLQPAWWPRHWPPGS*HSSTPS
Trigger: TGAGGGAGTTGAGGAATGCCATGACCCAGGAGGCCA...ATGTCTGGGCCACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp TTGGAAACTGACAATAGGCACGTGACCACACTCTGTTCCTTCAGGAGACTTGGCGGAAGAGGTCAGTGGTaGTGCCGCCAGTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LETDNRHVTTLCSFRRLGGRGQW*CRQSWP
Trigger: TGGCCAAGACTGGCGGCACCACCACTGACCTCTTCC...GCCAAGTCTCCTGAAGGAACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp GAAAAGGCTGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCCGTGTGACTCGGAGGTaGGGGTGGGGTAAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: EKAGRSRWERRNSKQTSARVTRR*GWGKVC
Trigger: ACAAACCTTACCCCACCCCCACCTCCGAGTCACACG...GGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCAGCCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp GTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGCTGCAGCCTGCCTGGTaGCCCAGACATCACATGGTG +
Preference number: 4 (lower is better)
Translates to: VLLAKYLRTFGAPAACLVLQPAW*PRHHMV
Trigger: CACCATGTGATGTCTGGGCCACCAGGCAGGCTGCAG...CACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR TCA 90 bp GCCAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATTTATCAACTTCTGGCTTCCAGTCTaGACACTCAAGCCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: AKLQRGHHRPGWEVGFINFWLPV*TLKPFF
Trigger: GAAAAAGGGCTTGAGTGTTCAGACTGGAAGCCAGAA...GTTGATAAATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR TCA 90 bp CTGTGGCCAGGTTCAAAGGAAATACCATCTGTGGAAGCACTTTCCAAAGAGGCGCGCCTTCAGGGCTGCTaGCAGCATCTCCACACACTT +
Preference number: 4 (lower is better)
Translates to: LWPGSKEIPSVEALSKEARLQGC*QHLHTL
Trigger: AAGTGTGTGGAGATGCTGTCAGCAGCCCTGAAGGCG...CGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTTCCTTTGAACCTGGCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR TCA 90 bp AGCCTTCCTGTTTCCCATCCTTGGCTGTGGCCAGGTTCAAAGGAAATACCATCTCGCCTTCAGGGCTGCTaGCAGCATCTCCACACACTT +
Preference number: 4 (lower is better)
Translates to: SLPVSHPWLWPGSKEIPSRLQGC*QHLHTL
Trigger: AAGTGTGTGGAGATGCTGTCAGCAGCCCTGAAGGCG...AGATGGTATTTCCTTTGAACCTGGCCACAGCCAAGGATGGGAAACAGGAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR TCA 90 bp TCTGTGGAAGCACTTTCCAAAGAGGCGTGGTCCAAGTGCAGAATGTTTTTCCTCGGTTCCTGGGGTCCTTaGGGTTGCTTATGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SVEALSKEAWSKCRMFFLGSWGP*GCLCGC
Trigger: GCAGCCGCATAAGCAACCTCAAGGACCCCAGGAACC...GAGGAAAAACATTCTGCACTTGGACCACGCCTCTTTGGAAAGTGCTTCCACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp TGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCAGCCCACTGACATCTGGCAGCTGTaGAGCTTCTTCAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: WEIQMGEKELKANVCQPTDIWQL*SFFRRS
Trigger: GGACCTTCTGAAGAAGCTGCACAGCTGCCAGATGTC...AGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp AAGGAACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGGGTTGCTTATGCGGCTaGGCACGCGGTTCCGGTACT +
Preference number: 4 (lower is better)
Translates to: KELKANVCQPTVKDMTPQGCLCG*ARGSGT
Trigger: AGTACCGGAACCGCGTGCGCAGCCGCATAAGCAACC...CTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp GACATCACATGGTGCACATGCAAGTCAGAGAGCAGTTGGAAACTGACAATAGGCGGTTGCTTATGCGGCTaGGCACGCGGTTCCGGTACT +
Preference number: 4 (lower is better)
Translates to: DITWCTCKSESSWKLTIGGCLCG*ARGSGT
Trigger: AGTACCGGAACCGCGTGCGCAGCCGCATAAGCAACC...GCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCATGTGCACCATGTGATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp GTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGAGAGGTCAGTGGTGGTaGCGCCAGTCTTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: VLLAKYLRTFGAPAACLVRGQWW*RQSWPS
Trigger: AGATGGCCAAGACTGGCGGCACCACCACTGACCTCT...CACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp CCAGGTTCAAAGGAAATACCATCTGTGGAAGCACTTTCCAAAGAGGCGTGGTCCAGAGGTCAGTGGTGGTaGCGCCAGTCTTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: PGSKEIPSVEALSKEAWSRGQWW*RQSWPS
Trigger: AGATGGCCAAGACTGGCGGCACCACCACTGACCTCT...GGACCACGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTTCCTTTGAACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp CTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGGCCCAGACATCAAAACTTCTGCCTTTaGAGGAGCTGGGGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: LSTLELLEHLQPAWWPRHQNFCL*RSWGSL
Trigger: CAGACTGCCCCAGCTCCTGCAAAGGCAGAAGTTTTG...ATGTCTGGGCCACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp TGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCAGCCCACTAGCTGGATGGACATCTaGCAGCTGTGCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: WEIQMGEKELKANVCQPTSWMDI*QLCSFF
Trigger: GAAGAAGCTGCACAGCTGCCAGATGTCCATCCAGCT...AGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp CAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATTTATCAACAGCCACAGAGTCTCTCCTaGTTTTGGGGTCTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: QTAERASSAGVGGWIYQQPQSLS*FWGLLV
Trigger: AACGAGAAGACCCCAAAACCAGGAGAGACTCTGTGG...CTGTTGATAAATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp GTGTCTTTAAAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTAGGCTGAGCTGGCTGGCTGGCTaGAATTCGTGTCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VSLKERFPESSYLSKTRLSWLAG*NSCLGS
Trigger: GCTGCCCAGACACGAATTCCAGCCAGCCAGCCAGCT...CAGCCTAGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTTTAAAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp AAGGAACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGGGGCCAGGAGACACATaGAAGAGGCAAACGTGGGGG +
Preference number: 4 (lower is better)
Translates to: KELKANVCQPTVKDMTPQGPGDT*KRQTWG
Trigger: CCCCCACGTTTGCCTCTTCCATGTGTCTCCTGGCCC...CTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp AGCCTTCCTGTTTCCCATCCTTGGCTGTGGCCAGGTTCAAAGGAAATACCATCTACTGGAAGAGGTCAGTaGTGGTGCCGCCAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SLPVSHPWLWPGSKEIPSTGRGQ*WCRQSW
Trigger: CCAAGACTGGCGGCACCACCACTGACCTCTTCCAGT...AGATGGTATTTCCTTTGAACCTGGCCACAGCCAAGGATGGGAAACAGGAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp CGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGGTCTAAGGCGCTGCAGTGCTGGGAGATCCAGATaGGAGAGAAGGAACTCAAAG +
Preference number: 4 (lower is better)
Translates to: RLPAHCQRYDTSGLRRCSAGRSR*ERRNSK
Trigger: CTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCAGC...ACTGCAGCGCCTTAGACCTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR TCA 90 bp CAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATTTATCAACAGTTCTGGCTTCCAGTCTaGACACTCAAGCCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: QTAERASSAGVGGWIYQQFWLPV*TLKPFF
Trigger: GAAAAAGGGCTTGAGTGTTCAGACTGGAAGCCAGAA...CTGTTGATAAATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR TCA 90 bp AACCACCGTGCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTGGACAGAGTCCCCTGTaGGATAGCAGGGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: NHRAQPSAVSKRGSSIQIGQSPL*DSRGPG
Trigger: TCCTGGCCCCCTGCTATCTCACAGGGGACTCTGTCC...AATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGCACGGTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR TCA 90 bp TGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCAGCCCACTCCACTGTCAAAGATATaGCACCTCAGGTCTAAGGCG +
Preference number: 4 (lower is better)
Translates to: WEIQMGEKELKANVCQPTPLSKI*HLRSKA
Trigger: CGCCTTAGACCTGAGGTGTCATATCTTTGACAGTGG...AGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp TGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCAGCCCACTTCCTTGTCTGAGCAGTaGTTGCGGACCCCATTAACA +
Preference number: 4 (lower is better)
Translates to: WEIQMGEKELKANVCQPTSLSEQ*LRTPLT
Trigger: TGTTAATGGGGTCCGCAAGCACTGCTCAGACAAGGA...AGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp TTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGGCCCTCCTTGTCTGAGCAGTaGTTGCGGACCCCATTAACA +
Preference number: 4 (lower is better)
Translates to: FLLSTLELLEHLQPAWWPSLSEQ*LRTPLT
Trigger: TGTTAATGGGGTCCGCAAGCACTGCTCAGACAAGGA...GGGCCACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp CTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGGCCCAGACATTCCTTGTCTGAGCAGTaGTTGCGGACCCCATTAACA +
Preference number: 4 (lower is better)
Translates to: LSTLELLEHLQPAWWPRHSLSEQ*LRTPLT
Trigger: TGTTAATGGGGTCCGCAAGCACTGCTCAGACAAGGA...ATGTCTGGGCCACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp ACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGGTCTACTTGGCTATAAGCCCTaGGGAGATGGCCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: TQSKRLPAHCQRYDTSGLLGYKP*GDGPTE
Trigger: CTCAGTGGGGCCATCTCCGCAGGGCTTATAGCCAAG...TAGACCTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp GAAAAGGCTGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCTGGGCTCATCAGCACTaGGTGTCTGCACCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: EKAGRSRWERRNSKQTSAWAHQH*VSAPGY
Trigger: ATAACCAGGTGCAGACACGCAGTGCTGATGAGCCCA...GGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCAGCCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp GAGTCCTCCTACCTGAGCAAGACTAGGCTGTTTGGAGCATTTCTTCCCACCTTCAGGAGGCAGAAGACTTaGAGTCCACAGAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: ESSYLSKTRLFGAFLPTFRRQKT*SPQSLS
Trigger: GGAGAGACTCTGTGGACTCCAAGTCTTCTGCCTCCT...GAAGGTGGGAAGAAATGCTCCAAACAGCCTAGTCTTGCTCAGGTAGGAGGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp AACCACCGTGCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTAGCAGCTCCTCTTCCTaGCCCATGTTGGCCCGCGAC +
Preference number: 4 (lower is better)
Translates to: NHRAQPSAVSKRGSSIQISSSSS*PMLARD
Trigger: GTCGCGGGCCAACATGGGCCAGGAAGAGGAGCTGCT...AATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGCACGGTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp ACGAACCTGCCTGTCGCCCTTCCAAATTCTTTTCAACACATCAACTGTGTCTTTCTGAGTAGAGGCATCTaGAGGCCGGGCCCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: TNLPVALPNSFQHINCVFLSRGI*RPGPLL
Trigger: AAGCAGCGGGCCCGGCCTCCAGATGCCTCTACTCAG...AAAGACACAGTTGATGTGTTGAAAAGAATTTGGAAGGGCGACAGGCAGGTTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp AAATACCATCTGTGGAAGCACTTTCCAAAGAGGCGTGGTCCAAGTGCAGAATGTGGGCCAGGAGACACATaGAAGAGGCAAACGTGGGGG +
Preference number: 4 (lower is better)
Translates to: KYHLWKHFPKRRGPSAECGPGDT*KRQTWG
Trigger: CCCCCACGTTTGCCTCTTCCATGTGTCTCCTGGCCC...ACATTCTGCACTTGGACCACGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp TTGTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTCTGGTGCTCACGGATaGCCTCCTGGGTCATGGCAT +
Preference number: 4 (lower is better)
Translates to: LYFLLSTLELLEHLQPAWSGAHG*PPGSWH
Trigger: ATGCCATGACCCAGGAGGCCATCCGTGAGCACCAGA...CCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp ATCTGTGGAAGCACTTTCCAAAGAGGCGTGGTCCAAGTGCAGAATGTTTTTCCTGGAAGAGGTCAGTGGTaGTGCCGCCAGTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: ICGSTFQRGVVQVQNVFPGRGQW*CRQSWP
Trigger: TGGCCAAGACTGGCGGCACCACCACTGACCTCTTCC...AGGAAAAACATTCTGCACTTGGACCACGCCTCTTTGGAAAGTGCTTCCACAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp ATGCAAGTCAGAGAGCAGTTGGAAACTGACAATAGGCACGTGACCACACTCTGTACTGGAAGAGGTCAGTaGTGGTGCCGCCAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: MQVREQLETDNRHVTTLCTGRGQ*WCRQSW
Trigger: CCAAGACTGGCGGCACCACCACTGACCTCTTCCAGT...ACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp TGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCAGCCCACTGCTGGGAGATCCAGATaGGAGAGAAGGAACTCAAAG +
Preference number: 4 (lower is better)
Translates to: WEIQMGEKELKANVCQPTAGRSR*ERRNSK
Trigger: CTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCAGC...AGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp CGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGGTCTAAGGCGCTGCAGTCAATTTGGAAAAGGCTaGGAGATCCAGATGGGAGAG +
Preference number: 4 (lower is better)
Translates to: RLPAHCQRYDTSGLRRCSQFGKG*EIQMGE
Trigger: CTCTCCCATCTGGATCTCCCAGCCTTTTCCAAATTG...ACTGCAGCGCCTTAGACCTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR TCA 90 bp CTCAGCATCATTCTCCAATTAGGCTCCCCCATTAACCAATTGTTTCTAATGACCCACCACCTCCTTGTCTaGGCAGTGCTTGCGGACCCC +
Preference number: 4 (lower is better)
Translates to: LSIILQLGSPINQLFLMTHHLLV*AVLADP
Trigger: GGGGTCCGCAAGCACTGCTCAGACAAGGAGGTGGTG...GGTCATTAGAAACAATTGGTTAATGGGGGAGCCTAATTGGAGAATGATGCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR TCA 90 bp AACCACCGTGCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTGGTTCCTGGGGTCCTTaGGGTTGCTTATGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: NHRAQPSAVSKRGSSIQIGSWGP*GCLCGC
Trigger: GCAGCCGCATAAGCAACCTCAAGGACCCCAGGAACC...AATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGCACGGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp AAGGAACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGGGGGTCTTGCTGTGTTaGCTGGGCTGGACTCAAACT +
Preference number: 4 (lower is better)
Translates to: KELKANVCQPTVKDMTPQGVLLC*LGWTQT
Trigger: AGTTTGAGTCCAGCCCAGGCAACACAGCAAGACCCC...CTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp AGCCTTCCTGTTTCCCATCCTTGGCTGTGGCCAGGTTCAAAGGAAATACCATCTCAAAACTTCTGCCTTTaGAGGAGCTGGGGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: SLPVSHPWLWPGSKEIPSQNFCL*RSWGSL
Trigger: CAGACTGCCCCAGCTCCTGCAAAGGCAGAAGTTTTG...AGATGGTATTTCCTTTGAACCTGGCCACAGCCAAGGATGGGAAACAGGAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp GTGAGTAACATGCTCAGCATGAGTAGGGCAGAATGGGACCTGAAACCAGGGATCCCACAGAGTCTCTCCTaGTTTTGGGGTCTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: VSNMLSMSRAEWDLKPGIPQSLS*FWGLLV
Trigger: AACGAGAAGACCCCAAAACCAGGAGAGACTCTGTGG...GATCCCTGGTTTCAGGTCCCATTCTGCCCTACTCATGCTGAGCATGTTACTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp TTGGAAACTGACAATAGGCACGTGACCACACTCTGTTCCTTCAGGAGACTTGGCAGGAGGCAGAAGACTTaGAGTCCACAGAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LETDNRHVTTLCSFRRLGRRQKT*SPQSLS
Trigger: GGAGAGACTCTGTGGACTCCAAGTCTTCTGCCTCCT...GCCAAGTCTCCTGAAGGAACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp GAGTCCTCCTACCTGAGCAAGACTAGGCTGTTTGGAGCATTTCTTCCCACCTTCTCTTCTCCAGCTTTTTaGCGATCCTCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ESSYLSKTRLFGAFLPTFSSPAF*RSSAAP
Trigger: AGGAGCTGCTGAGGATCGCCAAAAAGCTGGAGAAGA...GAAGGTGGGAAGAAATGCTCCAAACAGCCTAGTCTTGCTCAGGTAGGAGGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp AAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTAGGCTGTTTGGAGCACTTCCGTGTTCTTCCTaGCCACCATCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KERFPESSYLSKTRLFGALPCSS*PPSSPA
Trigger: AGCTGGAGAAGATGGTGGCCAGGAAGAACACGGAAG...TGCTCCAAACAGCCTAGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp GCAGCATTTCAGGCAGCCACACTCATTTTGCTTTCAATGCACACGCCTGGGAACTTCAATGCACACGCCTaGGAACTGAGCCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: AAFQAATLILLSMHTPGNFNAHA*ELSQTA
Trigger: TGCAGTTTGGCTCAGTTCCCAGGCGTGTGCATTGAA...GTTCCCAGGCGTGTGCATTGAAAGCAAAATGAGTGTGGCTGCCTGAAATGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp ACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGGTCTATGGCCTCCTGGGTCATaGCATTCCTCAACTCCCTCA +
Preference number: 4 (lower is better)
Translates to: TQSKRLPAHCQRYDTSGLWPPGS*HSSTPS
Trigger: TGAGGGAGTTGAGGAATGCCATGACCCAGGAGGCCA...TAGACCTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp ATGCAAGTCAGAGAGCAGTTGGAAACTGACAATAGGCACGTGACCACACTCTGTTGGCCTCCTGGGTCATaGCATTCCTCAACTCCCTCA +
Preference number: 4 (lower is better)
Translates to: MQVREQLETDNRHVTTLCWPPGS*HSSTPS
Trigger: TGAGGGAGTTGAGGAATGCCATGACCCAGGAGGCCA...ACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp AATACCATCTGTGGAAGCACTTTCCAAAGAGGCGTGGTCCAAGTGCAGAATGTTTCTGGTGCTCACGGATaGCCTCCTGGGTCATGGCAT +
Preference number: 4 (lower is better)
Translates to: NTICGSTFQRGVVQVQNVSGAHG*PPGSWH
Trigger: ATGCCATGACCCAGGAGGCCATCCGTGAGCACCAGA...AACATTCTGCACTTGGACCACGCCTCTTTGGAAAGTGCTTCCACAGATGGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp AACCACCGTGCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTGGAAGAGGTCAGTGGTaGTGCCGCCAGTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: NHRAQPSAVSKRGSSIQIGRGQW*CRQSWP
Trigger: TGGCCAAGACTGGCGGCACCACCACTGACCTCTTCC...AATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGCACGGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp GAAAAGGCTGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCTTGCATTTGCTGCACTaGAAGAGGTCAGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: EKAGRSRWERRNSKQTSALHLLH*KRSVVV
Trigger: CACCACCACTGACCTCTTCCAGTGCAGCAAATGCAA...GGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCAGCCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp AGCCTTCCTGTTTCCCATCCTTGGCTGTGGCCAGGTTCAAAGGAAATACCATCTCAGGAAGGAGCACTCTaGGAGGAGTCTTTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: SLPVSHPWLWPGSKEIPSQEGAL*EESLFG
Trigger: GCCAAACAAAGACTCCTCCCAGAGTGCTCCTTCCTG...AGATGGTATTTCCTTTGAACCTGGCCACAGCCAAGGATGGGAAACAGGAAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp TTGGAAACTGACAATAGGCACGTGACCACACTCTGTTCCTTCAGGAGACTTGGCTTCCTTCAGGAGACTTaGCAGGAAGGAGCACTCTGG +
Preference number: 4 (lower is better)
Translates to: LETDNRHVTTLCSFRRLGFLQET*QEGALW
Trigger: CCAGAGTGCTCCTTCCTGCCAAGTCTCCTGAAGGAA...GCCAAGTCTCCTGAAGGAACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR TCA 90 bp CCAGGTTCAAAGGAAATACCATCTGTGGAAGCACTTTCCAAAGAGGCGTGGTCCCTGACAATAGGCACGTaGCCACACTCTGTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PGSKEIPSVEALSKEAWSLTIGT*PHSVPS
Trigger: TGAAGGAACAGAGTGTGGTCACGTGCCTATTGTCAG...GGACCACGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTTCCTTTGAACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp GTGTCTTTAAAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTAGGCTGGACATCTGGCAGCTGTaGAGCTTCTTCAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: VSLKERFPESSYLSKTRLDIWQL*SFFRRS
Trigger: GGACCTTCTGAAGAAGCTGCACAGCTGCCAGATGTC...CAGCCTAGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTTTAAAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR GCA 90 bp AAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTAGGCTGTTTGGAGCATCCTTGTCTGAGCAGTaGTTGCGGACCCCATTAACA +
Preference number: 4 (lower is better)
Translates to: KERFPESSYLSKTRLFGASLSEQ*LRTPLT
Trigger: TGTTAATGGGGTCCGCAAGCACTGCTCAGACAAGGA...TGCTCCAAACAGCCTAGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR GCA 90 bp CAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATTTATCAACAGATCCATCCAAGTTACTaGCCCAAGTTATCCATCCAA +
Preference number: 4 (lower is better)
Translates to: QTAERASSAGVGGWIYQQIHPSY*PKLSIQ
Trigger: TTGGATGGATAACTTGGGGCAGTAACTTGGATGGAT...CTGTTGATAAATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR GCA 90 bp GAAAAGGCTGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCACTGGCCATTTCCTCTaGCGTCATCTTGGCTATAAG +
Preference number: 4 (lower is better)
Translates to: EKAGRSRWERRNSKQTSATGHFL*RHLGYK
Trigger: CTTATAGCCAAGATGACGGCAGAGGAAATGGCCAGT...GGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCAGCCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp GCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCAGAGGTCAGTGGTGGTaGCGCCAGTCTTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: AQPSAVSKRGSSIQILSIRGQWW*RQSWPS
Trigger: AGATGGCCAAGACTGGCGGCACCACCACTGACCTCT...GATGCTGAGAATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp TTGTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGGGCTCATCAGCACTaGGTGTCTGCACCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: LYFLLSTLELLEHLQPAWWAHQH*VSAPGY
Trigger: ATAACCAGGTGCAGACACGCAGTGCTGATGAGCCCA...CCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp ATGCAAGTCAGAGAGCAGTTGGAAACTGACAATAGGCACGTGACCACACTCTGTTGGGCTCATCAGCACTaGGTGTCTGCACCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: MQVREQLETDNRHVTTLCWAHQH*VSAPGY
Trigger: ATAACCAGGTGCAGACACGCAGTGCTGATGAGCCCA...ACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp GACATCACATGGTGCACATGCAAGTCAGAGAGCAGTTGGAAACTGACAATAGGCAGCTGGATGGACATCTaGCAGCTGTGCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: DITWCTCKSESSWKLTIGSWMDI*QLCSFF
Trigger: GAAGAAGCTGCACAGCTGCCAGATGTCCATCCAGCT...GCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCATGTGCACCATGTGATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp GCAGCATTTCAGGCAGCCACACTCATTTTGCTTTCAATGCACACGCCTGGGAACCAGCAACTCCAATCCTaGTTGTCTGTAGTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: AAFQAATLILLSMHTPGNQQLQS*LSVVAG
Trigger: TCCAGCTACTACAGACAACCAGGATTGGAGTTGCTG...GTTCCCAGGCGTGTGCATTGAAAGCAAAATGAGTGTGGCTGCCTGAAATGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp TTGTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGAGGAGGCAGAAGACTTaGAGTCCACAGAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LYFLLSTLELLEHLQPAWRRQKT*SPQSLS
Trigger: GGAGAGACTCTGTGGACTCCAAGTCTTCTGCCTCCT...CCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp AAGGAACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGAGGAGGCAGAAGACTTaGAGTCCACAGAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: KELKANVCQPTVKDMTPQRRQKT*SPQSLS
Trigger: GGAGAGACTCTGTGGACTCCAAGTCTTCTGCCTCCT...CTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp CCTTCCTGTTTCCCATCCTTGGCTGTGGCCAGGTTCAAAGGAAATACCATCTGTCACCGATGGTCTTTTTaGAGAGGAGGAGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: PSCFPSLAVARFKGNTICHRWSF*RGGGRR
Trigger: TCTTCTGCCTCCTCCTCTCCAAAAAGACCATCGGTG...ACAGATGGTATTTCCTTTGAACCTGGCCACAGCCAAGGATGGGAAACAGGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp TTGTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGCTTCCGTGTTCTTCCTaGCCACCATCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LYFLLSTLELLEHLQPAWLPCSS*PPSSPA
Trigger: AGCTGGAGAAGATGGTGGCCAGGAAGAACACGGAAG...CCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp CTCAGCATCATTCTCCAATTAGGCTCCCCCATTAACCAATTGTTTCTAATGACCGGGCCAGGAGACACATaGAAGAGGCAAACGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LSIILQLGSPINQLFLMTGPGDT*KRQTWG
Trigger: CCCCCACGTTTGCCTCTTCCATGTGTCTCCTGGCCC...GGTCATTAGAAACAATTGGTTAATGGGGGAGCCTAATTGGAGAATGATGCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp CCTTCCTGTTTCCCATCCTTGGCTGTGGCCAGGTTCAAAGGAAATACCATCTGTTTGCATTTGCTGCACTaGAAGAGGTCAGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PSCFPSLAVARFKGNTICLHLLH*KRSVVV
Trigger: CACCACCACTGACCTCTTCCAGTGCAGCAAATGCAA...ACAGATGGTATTTCCTTTGAACCTGGCCACAGCCAAGGATGGGAAACAGGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp ACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGGTCTACTGTGTTGCCTGGGCTaGACTCAAACTTCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: TQSKRLPAHCQRYDTSGLLCCLG*TQTSGV
Trigger: AACCCCAGAAGTTTGAGTCCAGCCCAGGCAACACAG...TAGACCTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp ATGCAAGTCAGAGAGCAGTTGGAAACTGACAATAGGCACGTGACCACACTCTGTCCTGTTTCCCATCCTTaGCTGTGGCCAGGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: MQVREQLETDNRHVTTLCPVSHP*LWPGSK
Trigger: CTTTGAACCTGGCCACAGCCAAGGATGGGAAACAGG...ACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp GTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGGGAAGGATGGCCTGGTaGCATTTAGGTTCAACTCCT +
Preference number: 4 (lower is better)
Translates to: VLLAKYLRTFGAPAACLVGRMAW*HLGSTP
Trigger: AGGAGTTGAACCTAAATGCCACCAGGCCATCCTTCC...CACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp CCTTCCTGTTTCCCATCCTTGGCTGTGGCCAGGTTCAAAGGAAATACCATCTGTGGAAGGATGGCCTGGTaGCATTTAGGTTCAACTCCT +
Preference number: 4 (lower is better)
Translates to: PSCFPSLAVARFKGNTICGRMAW*HLGSTP
Trigger: AGGAGTTGAACCTAAATGCCACCAGGCCATCCTTCC...ACAGATGGTATTTCCTTTGAACCTGGCCACAGCCAAGGATGGGAAACAGGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp ATGCAAGTCAGAGAGCAGTTGGAAACTGACAATAGGCACGTGACCACACTCTGTTGCCTTTGCAGGAGCTaGGGCAGTCTGAGTTACAGA +
Preference number: 4 (lower is better)
Translates to: MQVREQLETDNRHVTTLCCLCRS*GSLSYR
Trigger: TCTGTAACTCAGACTGCCCCAGCTCCTGCAAAGGCA...ACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp TCTGTGGAAGCACTTTCCAAAGAGGCGTGGTCCAAGTGCAGAATGTTTTTCCTCTGCCTTTGCAGGAGCTaGGGCAGTCTGAGTTACAGA +
Preference number: 4 (lower is better)
Translates to: SVEALSKEAWSKCRMFFLCLCRS*GSLSYR
Trigger: TCTGTAACTCAGACTGCCCCAGCTCCTGCAAAGGCA...GAGGAAAAACATTCTGCACTTGGACCACGCCTCTTTGGAAAGTGCTTCCACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp GTGAGTAACATGCTCAGCATGAGTAGGGCAGAATGGGACCTGAAACCAGGGATCGGAGGAGTCTTTGTTTaGCTCCCATGCGTGAAAACA +
Preference number: 4 (lower is better)
Translates to: VSNMLSMSRAEWDLKPGIGGVFV*LPCVKT
Trigger: TGTTTTCACGCATGGGAGCCAAACAAAGACTCCTCC...GATCCCTGGTTTCAGGTCCCATTCTGCCCTACTCATGCTGAGCATGTTACTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp ATGCAAGTCAGAGAGCAGTTGGAAACTGACAATAGGCACGTGACCACACTCTGTGGCCCAGACATCACATaGTGCACATGCAAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: MQVREQLETDNRHVTTLCGPDIT*CTCKSE
Trigger: CTCTGACTTGCATGTGCACCATGTGATGTCTGGGCC...ACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR TCA 90 bp CTGTGGCCAGGTTCAAAGGAAATACCATCTGTGGAAGCACTTTCCAAAGAGGCGTTCTGGCTTCCAGTCTaGACACTCAAGCCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LWPGSKEIPSVEALSKEAFWLPV*TLKPFF
Trigger: GAAAAAGGGCTTGAGTGTTCAGACTGGAAGCCAGAA...CGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTTCCTTTGAACCTGGCCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR TCA 90 bp GTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGTTCTGGCTTCCAGTCTaGACACTCAAGCCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: VLLAKYLRTFGAPAACLVFWLPV*TLKPFF
Trigger: GAAAAAGGGCTTGAGTGTTCAGACTGGAAGCCAGAA...CACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR TCA 90 bp CTCAGCATCATTCTCCAATTAGGCTCCCCCATTAACCAATTGTTTCTAATGACCCGCCTTCAGGGCTGCTaGCAGCATCTCCACACACTT +
Preference number: 4 (lower is better)
Translates to: LSIILQLGSPINQLFLMTRLQGC*QHLHTL
Trigger: AAGTGTGTGGAGATGCTGTCAGCAGCCCTGAAGGCG...GGTCATTAGAAACAATTGGTTAATGGGGGAGCCTAATTGGAGAATGATGCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR TCA 90 bp GACATCACATGGTGCACATGCAAGTCAGAGAGCAGTTGGAAACTGACAATAGGCCTGACAATAGGCACGTaGCCACACTCTGTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: DITWCTCKSESSWKLTIGLTIGT*PHSVPS
Trigger: TGAAGGAACAGAGTGTGGTCACGTGCCTATTGTCAG...GCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCATGTGCACCATGTGATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp GTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGACTGGCCATTTCCTCTaGCGTCATCTTGGCTATAAG +
Preference number: 4 (lower is better)
Translates to: VLLAKYLRTFGAPAACLVTGHFL*RHLGYK
Trigger: CTTATAGCCAAGATGACGGCAGAGGAAATGGCCAGT...CACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp AGCCTTCCTGTTTCCCATCCTTGGCTGTGGCCAGGTTCAAAGGAAATACCATCTTCTTCTTGCATTTGCTaGACTGGAAGAGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: SLPVSHPWLWPGSKEIPSSSCIC*TGRGQW
Trigger: CCACTGACCTCTTCCAGTGCAGCAAATGCAAGAAGA...AGATGGTATTTCCTTTGAACCTGGCCACAGCCAAGGATGGGAAACAGGAAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp AGCCTTCCTGTTTCCCATCCTTGGCTGTGGCCAGGTTCAAAGGAAATACCATCTCAGCAACTCCAATCCTaGTTGTCTGTAGTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SLPVSHPWLWPGSKEIPSQQLQS*LSVVAG
Trigger: TCCAGCTACTACAGACAACCAGGATTGGAGTTGCTG...AGATGGTATTTCCTTTGAACCTGGCCACAGCCAAGGATGGGAAACAGGAAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp TTGGAAACTGACAATAGGCACGTGACCACACTCTGTTCCTTCAGGAGACTTGGCCAGCAACTCCAATCCTaGTTGTCTGTAGTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LETDNRHVTTLCSFRRLGQQLQS*LSVVAG
Trigger: TCCAGCTACTACAGACAACCAGGATTGGAGTTGCTG...GCCAAGTCTCCTGAAGGAACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp GACATCACATGGTGCACATGCAAGTCAGAGAGCAGTTGGAAACTGACAATAGGCCCACAGAGTCTCTCCTaGTTTTGGGGTCTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: DITWCTCKSESSWKLTIGPQSLS*FWGLLV
Trigger: AACGAGAAGACCCCAAAACCAGGAGAGACTCTGTGG...GCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCATGTGCACCATGTGATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp ATGCAAGTCAGAGAGCAGTTGGAAACTGACAATAGGCACGTGACCACACTCTGTCACCGATGGTCTTTTTaGAGAGGAGGAGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: MQVREQLETDNRHVTTLCHRWSF*RGGGRR
Trigger: TCTTCTGCCTCCTCCTCTCCAAAAAGACCATCGGTG...ACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp AAGGAACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGTCTTCTCCAGCTTTTTaGCGATCCTCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: KELKANVCQPTVKDMTPQSSPAF*RSSAAP
Trigger: AGGAGCTGCTGAGGATCGCCAAAAAGCTGGAGAAGA...CTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp TCAACTGTGTCTTTAAAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTGCTGGAATTCGTGTCTaGGCAGCATTTCAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: STVSLKERFPESSYLSKTAGIRV*AAFQAA
Trigger: GGCTGCCTGAAATGCTGCCCAGACACGAATTCCAGC...AGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTTTAAAGACACAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp AAGGAACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGTTGCATTTGCTGCACTaGAAGAGGTCAGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: KELKANVCQPTVKDMTPQLHLLH*KRSVVV
Trigger: CACCACCACTGACCTCTTCCAGTGCAGCAAATGCAA...CTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp AAGGAACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGCACCTTGTTCATGGCTaGCTGTTCCATCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: KELKANVCQPTVKDMTPQHLVHG*LFHQQN
Trigger: GTTCTGCTGATGGAACAGCCAGCCATGAACAAGGTG...CTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp AAGGAACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGTCCTCACCTTGTTCATaGCTGGCTGTTCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: KELKANVCQPTVKDMTPQSSPCS*LAVPSA
Trigger: TGCTGATGGAACAGCCAGCCATGAACAAGGTGAGGA...CTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp CTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGGCCCAGACATAGGAAATACCATCTGTaGAAGCACTTTCCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: LSTLELLEHLQPAWWPRHRKYHL*KHFPKR
Trigger: CCTCTTTGGAAAGTGCTTCCACAGATGGTATTTCCT...ATGTCTGGGCCACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR CAA 72 bp AGACATCACATGGTGCACATGCAAGTCAGAGAGCAGTaGGAAACTGACAATAGGCACGTGACCACACTCTGT +
Preference number: 4 (lower is better)
Translates to: RHHMVHMQVREQ*ETDNRHVTTLC
Trigger: ACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCATGTGCACCATGTGATGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR CAA 72 bp CTTATCTTGTACTTCTTGCTAAGTACCTTAGAACTTTaGGAGCACCTGCAGCCTGCCTGGTGGCCCAGACAT +
Preference number: 4 (lower is better)
Translates to: LILYFLLSTLEL*EHLQPAWWPRH
Trigger: ATGTCTGGGCCACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTACAAGATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR TCA 90 bp ACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGGTCTATTCTGGCTTCCAGTCTaGACACTCAAGCCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: TQSKRLPAHCQRYDTSGLFWLPV*TLKPFF
Trigger: GAAAAAGGGCTTGAGTGTTCAGACTGGAAGCCAGAA...TAGACCTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR TCA 90 bp CTGTGGCCAGGTTCAAAGGAAATACCATCTGTGGAAGCACTTTCCAAAGAGGCGTCATGTCCGTGCTCTTaGGCTCTTGGTAGATATGAT +
Preference number: 4 (lower is better)
Translates to: LWPGSKEIPSVEALSKEASCPCS*ALGRYD
Trigger: ATCATATCTACCAAGAGCTCAAGAGCACGGACATGA...CGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTTCCTTTGAACCTGGCCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR TCA 90 bp CCTTCCTGTTTCCCATCCTTGGCTGTGGCCAGGTTCAAAGGAAATACCATCTGTTCATGTCCGTGCTCTTaGGCTCTTGGTAGATATGAT +
Preference number: 4 (lower is better)
Translates to: PSCFPSLAVARFKGNTICSCPCS*ALGRYD
Trigger: ATCATATCTACCAAGAGCTCAAGAGCACGGACATGA...ACAGATGGTATTTCCTTTGAACCTGGCCACAGCCAAGGATGGGAAACAGGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp ACGAACCTGCCTGTCGCCCTTCCAAATTCTTTTCAACACATCAACTGTGTCTTTGACATCTGGCAGCTGTaGAGCTTCTTCAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: TNLPVALPNSFQHINCVFDIWQL*SFFRRS
Trigger: GGACCTTCTGAAGAAGCTGCACAGCTGCCAGATGTC...AAAGACACAGTTGATGTGTTGAAAAGAATTTGGAAGGGCGACAGGCAGGTTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR GCA 90 bp CAAATTCTCAGCATCATTCTCCAATTAGGCTCCCCCATTAACCAATTGTTTCTAGGTTGCTTATGCGGCTaGGCACGCGGTTCCGGTACT +
Preference number: 4 (lower is better)
Translates to: QILSIILQLGSPINQLFLGCLCG*ARGSGT
Trigger: AGTACCGGAACCGCGTGCGCAGCCGCATAAGCAACC...TAGAAACAATTGGTTAATGGGGGAGCCTAATTGGAGAATGATGCTGAGAATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp TTGTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGACTGGCCATTTCCTCTaGCGTCATCTTGGCTATAAG +
Preference number: 4 (lower is better)
Translates to: LYFLLSTLELLEHLQPAWTGHFL*RHLGYK
Trigger: CTTATAGCCAAGATGACGGCAGAGGAAATGGCCAGT...CCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp GTGTCTTTAAAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTAGGCTGTGCTCTTTCCACCGATaGTCTTTTTGGAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: VSLKERFPESSYLSKTRLCSFHR*SFWRGG
Trigger: TCCTCCTCTCCAAAAAGACCATCGGTGGAAAGAGCA...CAGCCTAGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTTTAAAGACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp AAATACCATCTGTGGAAGCACTTTCCAAAGAGGCGTGGTCCAAGTGCAGAATGTTTGCATTTGCTGCACTaGAAGAGGTCAGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: KYHLWKHFPKRRGPSAECLHLLH*KRSVVV
Trigger: CACCACCACTGACCTCTTCCAGTGCAGCAAATGCAA...ACATTCTGCACTTGGACCACGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp AAGGAACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGCAATTTGGAAAAGGCTaGGAGATCCAGATGGGAGAG +
Preference number: 4 (lower is better)
Translates to: KELKANVCQPTVKDMTPQQFGKG*EIQMGE
Trigger: CTCTCCCATCTGGATCTCCCAGCCTTTTCCAAATTG...CTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp CCTTCCTGTTTCCCATCCTTGGCTGTGGCCAGGTTCAAAGGAAATACCATCTGTCTTTCCAAAGAGGCGTaGTCCAAGTGCAGAATGTTT +
Preference number: 4 (lower is better)
Translates to: PSCFPSLAVARFKGNTICLSKEA*SKCRMF
Trigger: AAACATTCTGCACTTGGACCACGCCTCTTTGGAAAG...ACAGATGGTATTTCCTTTGAACCTGGCCACAGCCAAGGATGGGAAACAGGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp ATGCAAGTCAGAGAGCAGTTGGAAACTGACAATAGGCACGTGACCACACTCTGTGGAGGAGTCTTTGTTTaGCTCCCATGCGTGAAAACA +
Preference number: 4 (lower is better)
Translates to: MQVREQLETDNRHVTTLCGGVFV*LPCVKT
Trigger: TGTTTTCACGCATGGGAGCCAAACAAAGACTCCTCC...ACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp CTGTGGCCAGGTTCAAAGGAAATACCATCTGTGGAAGCACTTTCCAAAGAGGCGAAGTCAGAGAGCAGTTaGAAACTGACAATAGGCACG +
Preference number: 4 (lower is better)
Translates to: LWPGSKEIPSVEALSKEAKSESS*KLTIGT
Trigger: CGTGCCTATTGTCAGTTTCCAACTGCTCTCTGACTT...CGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTTCCTTTGAACCTGGCCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR TCA 90 bp AAGGAACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGTCATGTCCGTGCTCTTaGGCTCTTGGTAGATATGAT +
Preference number: 4 (lower is better)
Translates to: KELKANVCQPTVKDMTPQSCPCS*ALGRYD
Trigger: ATCATATCTACCAAGAGCTCAAGAGCACGGACATGA...CTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR TCA 90 bp GTGAGTAACATGCTCAGCATGAGTAGGGCAGAATGGGACCTGAAACCAGGGATCACCCTCATATCAAAATaGTCCTCACATCATCAAACC +
Preference number: 4 (lower is better)
Translates to: VSNMLSMSRAEWDLKPGITLISK*SSHHQT
Trigger: GGTTTGATGATGTGAGGATCATTTTGATATGAGGGT...GATCCCTGGTTTCAGGTCCCATTCTGCCCTACTCATGCTGAGCATGTTACTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp ACGAACCTGCCTGTCGCCCTTCCAAATTCTTTTCAACACATCAACTGTGTCTTTTCCTTGTCTGAGCAGTaGTTGCGGACCCCATTAACA +
Preference number: 4 (lower is better)
Translates to: TNLPVALPNSFQHINCVFSLSEQ*LRTPLT
Trigger: TGTTAATGGGGTCCGCAAGCACTGCTCAGACAAGGA...AAAGACACAGTTGATGTGTTGAAAAGAATTTGGAAGGGCGACAGGCAGGTTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR GCA 90 bp TTGTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGCCGCTTTTGATTTGCTaGTGTTTGATCTTTCCACCG +
Preference number: 4 (lower is better)
Translates to: LYFLLSTLELLEHLQPAWPLLIC*CLIFPP
Trigger: CGGTGGAAAGATCAAACAGCAGCAAATCAAAAGCGG...CCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp AAATACCATCTGTGGAAGCACTTTCCAAAGAGGCGTGGTCCAAGTGCAGAATGTTCTTCTTGCATTTGCTaGACTGGAAGAGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: KYHLWKHFPKRRGPSAECSSCIC*TGRGQW
Trigger: CCACTGACCTCTTCCAGTGCAGCAAATGCAAGAAGA...ACATTCTGCACTTGGACCACGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp CCTTCCTGTTTCCCATCCTTGGCTGTGGCCAGGTTCAAAGGAAATACCATCTGTTGCAGTTCTTCTTCTTaGATTTGCTGCACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: PSCFPSLAVARFKGNTICCSSSS*ICCTGR
Trigger: TCTTCCAGTGCAGCAAATGCAAGAAGAAGAACTGCA...ACAGATGGTATTTCCTTTGAACCTGGCCACAGCCAAGGATGGGAAACAGGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp GTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGTGCAGTTCTTCTTCTTaGATTTGCTGCACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: VLLAKYLRTFGAPAACLVCSSSS*ICCTGR
Trigger: TCTTCCAGTGCAGCAAATGCAAGAAGAAGAACTGCA...CACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp CCTGTTTCCCATCCTTGGCTGTGGCCAGGTTCAAAGGAAATACCATCTGTGGAAGCACCTGGTTATAGGTaGAGTTCTTCTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: PVSHPWLWPGSKEIPSVEAPGYR*SSSSCI
Trigger: AATGCAAGAAGAAGAACTGCACCTATAACCAGGTGC...TTCCACAGATGGTATTTCCTTTGAACCTGGCCACAGCCAAGGATGGGAAACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp GAAAAGGCTGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCAGAACTTCCAGCGATTaGCACATTCATTGCATAAGA +
Preference number: 4 (lower is better)
Translates to: EKAGRSRWERRNSKQTSARTSSD*HIHCIR
Trigger: TCTTATGCAATGAATGTGGCAATCGCTGGAAGTTCT...GGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCAGCCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp ACGAACCTGCCTGTCGCCCTTCCAAATTCTTTTCAACACATCAACTGTGTCTTTCCACAGAGTCTCTCCTaGTTTTGGGGTCTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: TNLPVALPNSFQHINCVFPQSLS*FWGLLV
Trigger: AACGAGAAGACCCCAAAACCAGGAGAGACTCTGTGG...AAAGACACAGTTGATGTGTTGAAAAGAATTTGGAAGGGCGACAGGCAGGTTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp AACCACCGTGCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTCACCGATGGTCTTTTTaGAGAGGAGGAGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: NHRAQPSAVSKRGSSIQIHRWSF*RGGGRR
Trigger: TCTTCTGCCTCCTCCTCTCCAAAAAGACCATCGGTG...AATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGCACGGTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp TCAACTGTGTCTTTAAAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTTCTTCTCCAGCTTTTTaGCGATCCTCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: STVSLKERFPESSYLSKTSSPAF*RSSAAP
Trigger: AGGAGCTGCTGAGGATCGCCAAAAAGCTGGAGAAGA...AGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTTTAAAGACACAGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp GCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCTCTTCTCCAGCTTTTTaGCGATCCTCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: AQPSAVSKRGSSIQILSISSPAF*RSSAAP
Trigger: AGGAGCTGCTGAGGATCGCCAAAAAGCTGGAGAAGA...GATGCTGAGAATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp ACGAACCTGCCTGTCGCCCTTCCAAATTCTTTTCAACACATCAACTGTGTCTTTTTCAATGCACACGCCTaGGAACTGAGCCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: TNLPVALPNSFQHINCVFFNAHA*ELSQTA
Trigger: TGCAGTTTGGCTCAGTTCCCAGGCGTGTGCATTGAA...AAAGACACAGTTGATGTGTTGAAAAGAATTTGGAAGGGCGACAGGCAGGTTCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp AGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATTCTCTGGTGCTCACGGATaGCCTCCTGGGTCATGGCAT +
Preference number: 4 (lower is better)
Translates to: SPLQFLKEVHQYKFSASFSGAHG*PPGSWH
Trigger: ATGCCATGACCCAGGAGGCCATCCGTGAGCACCAGA...GAATGATGCTGAGAATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp TCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATTCTCCAATTAGGCTCCGGAAGAGGTCAGTGGTaGTGCCGCCAGTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: SKRGSSIQILSIILQLGSGRGQW*CRQSWP
Trigger: TGGCCAAGACTGGCGGCACCACCACTGACCTCTTCC...GGAGCCTAATTGGAGAATGATGCTGAGAATTTGTATTGATGAACCTCTTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp CAAATTCTCAGCATCATTCTCCAATTAGGCTCCCCCATTAACCAATTGTTTCTAACTGGAAGAGGTCAGTaGTGGTGCCGCCAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: QILSIILQLGSPINQLFLTGRGQ*WCRQSW
Trigger: CCAAGACTGGCGGCACCACCACTGACCTCTTCCAGT...TAGAAACAATTGGTTAATGGGGGAGCCTAATTGGAGAATGATGCTGAGAATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp AACCACCGTGCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTTCCTCACCTTGTTCATaGCTGGCTGTTCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: NHRAQPSAVSKRGSSIQISSPCS*LAVPSA
Trigger: TGCTGATGGAACAGCCAGCCATGAACAAGGTGAGGA...AATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGCACGGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp CTCAGCATCATTCTCCAATTAGGCTCCCCCATTAACCAATTGTTTCTAATGACCCTGTGTTGCCTGGGCTaGACTCAAACTTCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: LSIILQLGSPINQLFLMTLCCLG*TQTSGV
Trigger: AACCCCAGAAGTTTGAGTCCAGCCCAGGCAACACAG...GGTCATTAGAAACAATTGGTTAATGGGGGAGCCTAATTGGAGAATGATGCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp CCAGGTTCAAAGGAAATACCATCTGTGGAAGCACTTTCCAAAGAGGCGTGGTCCAGGAAATACCATCTGTaGAAGCACTTTCCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: PGSKEIPSVEALSKEAWSRKYHL*KHFPKR
Trigger: CCTCTTTGGAAAGTGCTTCCACAGATGGTATTTCCT...GGACCACGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTTCCTTTGAACCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp ATGCAAGTCAGAGAGCAGTTGGAAACTGACAATAGGCACGTGACCACACTCTGTAAGTCAGAGAGCAGTTaGAAACTGACAATAGGCACG +
Preference number: 4 (lower is better)
Translates to: MQVREQLETDNRHVTTLCKSESS*KLTIGT
Trigger: CGTGCCTATTGTCAGTTTCCAACTGCTCTCTGACTT...ACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR TCA 90 bp AAGGAACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGCCATCTTGTCACAGTTaGCTCCATAGTCCTTGTAAT +
Preference number: 4 (lower is better)
Translates to: KELKANVCQPTVKDMTPQPSCHS*LHSPCN
Trigger: ATTACAAGGACTATGGAGTCAACTGTGACAAGATGG...CTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR TCA 90 bp CTGTGGCCAGGTTCAAAGGAAATACCATCTGTGGAAGCACTTTCCAAAGAGGCGATGATCTTCGATTTCTaGTGCCATCTTGTCACAGTT +
Preference number: 4 (lower is better)
Translates to: LWPGSKEIPSVEALSKEAMIFDF*CHLVTV
Trigger: AACTGTGACAAGATGGCATCAGAAATCGAAGATCAT...CGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTTCCTTTGAACCTGGCCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR TCA 90 bp CTCAGCATCATTCTCCAATTAGGCTCCCCCATTAACCAATTGTTTCTAATGACCCCACTGTCAAAGATATaGCACCTCAGGTCTAAGGCG +
Preference number: 4 (lower is better)
Translates to: LSIILQLGSPINQLFLMTPLSKI*HLRSKA
Trigger: CGCCTTAGACCTGAGGTGTCATATCTTTGACAGTGG...GGTCATTAGAAACAATTGGTTAATGGGGGAGCCTAATTGGAGAATGATGCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR TCA 90 bp CCTTCCTGTTTCCCATCCTTGGCTGTGGCCAGGTTCAAAGGAAATACCATCTGTACCCTCATATCAAAATaGTCCTCACATCATCAAACC +
Preference number: 4 (lower is better)
Translates to: PSCFPSLAVARFKGNTICTLISK*SSHHQT
Trigger: GGTTTGATGATGTGAGGATCATTTTGATATGAGGGT...ACAGATGGTATTTCCTTTGAACCTGGCCACAGCCAAGGATGGGAAACAGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp TCAACTGTGTCTTTAAAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTGGGCATTTCAGTTACTaGATCAGCGAGCATGCTCTT +
Preference number: 4 (lower is better)
Translates to: STVSLKERFPESSYLSKTGHFSY*ISEHAL
Trigger: AAGAGCATGCTCGCTGATGCAGTAACTGAAATGCCC...AGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTTTAAAGACACAGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR GCA 90 bp CCAGGTTCAAAGGAAATACCATCTGTGGAAGCACTTTCCAAAGAGGCGTGGTCCTCTCCGCTTTTGATTTaGTGCTGTTTGATCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PGSKEIPSVEALSKEAWSSPLLI*CCLIFP
Trigger: TGGAAAGATCAAACAGCAGCAAATCAAAAGCGGAGA...GGACCACGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTTCCTTTGAACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp GCAAAGTGTTTATGCATACATGATAACCCTCATATCAAAATGATCCTCACATCAGGTTGCTTATGCGGCTaGGCACGCGGTTCCGGTACT +
Preference number: 4 (lower is better)
Translates to: AKCLCIHDNPHIKMILTSGCLCG*ARGSGT
Trigger: AGTACCGGAACCGCGTGCGCAGCCGCATAAGCAACC...TGATGTGAGGATCATTTTGATATGAGGGTTATCATGTATGCATAAACACTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp AACCACCGTGCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTACTGGCCATTTCCTCTaGCGTCATCTTGGCTATAAG +
Preference number: 4 (lower is better)
Translates to: NHRAQPSAVSKRGSSIQITGHFL*RHLGYK
Trigger: CTTATAGCCAAGATGACGGCAGAGGAAATGGCCAGT...AATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGCACGGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp TCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATTCTCCAATTAGGCTCCAGAGGTCAGTGGTGGTaGCGCCAGTCTTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: SKRGSSIQILSIILQLGSRGQWW*RQSWPS
Trigger: AGATGGCCAAGACTGGCGGCACCACCACTGACCTCT...GGAGCCTAATTGGAGAATGATGCTGAGAATTTGTATTGATGAACCTCTTTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp AACCACCGTGCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTTCTTCTTGCATTTGCTaGACTGGAAGAGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: NHRAQPSAVSKRGSSIQISSCIC*TGRGQW
Trigger: CCACTGACCTCTTCCAGTGCAGCAAATGCAAGAAGA...AATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGCACGGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp AAGGAACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGGCACCTGGTTATAGGTaGAGTTCTTCTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: KELKANVCQPTVKDMTPQAPGYR*SSSSCI
Trigger: AATGCAAGAAGAAGAACTGCACCTATAACCAGGTGC...CTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp AACCACCGTGCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTCTCAAAGCAAACGTCTaGCAGCCCACTGTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: NHRAQPSAVSKRGSSIQILKANV*QPTVKD
Trigger: ATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAG...AATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGCACGGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp AAACCAGGGATCCTGACTTATCTTGTACTTCTTGCTAAGTACCTTAGAACTTTTAACTTTTGGAGCACCTaGAGCCTGCCTGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: KPGILTYLVLLAKYLRTFNFWST*SLPGGP
Trigger: TGGGCCACCAGGCAGGCTGCAGGTGCTCCAAAAGTT...AAAAGTTCTAAGGTACTTAGCAAGAAGTACAAGATAAGTCAGGATCCCTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp TCAACTGTGTCTTTAAAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTCAGCAACTCCAATCCTaGTTGTCTGTAGTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: STVSLKERFPESSYLSKTQQLQS*LSVVAG
Trigger: TCCAGCTACTACAGACAACCAGGATTGGAGTTGCTG...AGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTTTAAAGACACAGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp AACCACCGTGCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTCAGCAACTCCAATCCTaGTTGTCTGTAGTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: NHRAQPSAVSKRGSSIQIQQLQS*LSVVAG
Trigger: TCCAGCTACTACAGACAACCAGGATTGGAGTTGCTG...AATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGCACGGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp TCAACTGTGTCTTTAAAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTTGCTCTTTCCACCGATaGTCTTTTTGGAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: STVSLKERFPESSYLSKTCSFHR*SFWRGG
Trigger: TCCTCCTCTCCAAAAAGACCATCGGTGGAAAGAGCA...AGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTTTAAAGACACAGTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CCA 90 bp CTCAGCATCATTCTCCAATTAGGCTCCCCCATTAACCAATTGTTTCTAATGACCCACCTTGTTCATGGCTaGCTGTTCCATCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: LSIILQLGSPINQLFLMTHLVHG*LFHQQN
Trigger: GTTCTGCTGATGGAACAGCCAGCCATGAACAAGGTG...GGTCATTAGAAACAATTGGTTAATGGGGGAGCCTAATTGGAGAATGATGCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp AAATACCATCTGTGGAAGCACTTTCCAAAGAGGCGTGGTCCAAGTGCAGAATGTCTTTCCAAAGAGGCGTaGTCCAAGTGCAGAATGTTT +
Preference number: 4 (lower is better)
Translates to: KYHLWKHFPKRRGPSAECLSKEA*SKCRMF
Trigger: AAACATTCTGCACTTGGACCACGCCTCTTTGGAAAG...ACATTCTGCACTTGGACCACGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp CTGACTTATCTTGTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCACAGGAAGGAGCACTCTaGGAGGAGTCTTTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: LTYLVLLAKYLRTFGAPAQEGAL*EESLFG
Trigger: GCCAAACAAAGACTCCTCCCAGAGTGCTCCTTCCTG...TGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTACAAGATAAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp AGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATTCGACATCTGGCAGCTGTaGAGCTTCTTCAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: SPLQFLKEVHQYKFSASFDIWQL*SFFRRS
Trigger: GGACCTTCTGAAGAAGCTGCACAGCTGCCAGATGTC...GAATGATGCTGAGAATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp TCAACTGTGTCTTTAAAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTTCATTTTGCTTTCAATaGACACGCCTGGGAACTGAG +
Preference number: 4 (lower is better)
Translates to: STVSLKERFPESSYLSKTSFCFQ*TRLGTE
Trigger: CTCAGTTCCCAGGCGTGTGCATTGAAAGCAAAATGA...AGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTTTAAAGACACAGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR GCA 90 bp GCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCCCGCTTTTGATTTGCTaGTGTTTGATCTTTCCACCG +
Preference number: 4 (lower is better)
Translates to: AQPSAVSKRGSSIQILSIPLLIC*CLIFPP
Trigger: CGGTGGAAAGATCAAACAGCAGCAAATCAAAAGCGG...GATGCTGAGAATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp AATACCATCTGTGGAAGCACTTTCCAAAGAGGCGTGGTCCAAGTGCAGAATGTTGCACCTGGTTATAGGTaGAGTTCTTCTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: NTICGSTFQRGVVQVQNVAPGYR*SSSSCI
Trigger: AATGCAAGAAGAAGAACTGCACCTATAACCAGGTGC...AACATTCTGCACTTGGACCACGCCTCTTTGGAAAGTGCTTCCACAGATGGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp AAGGAACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGAGAACTTCCAGCGATTaGCACATTCATTGCATAAGA +
Preference number: 4 (lower is better)
Translates to: KELKANVCQPTVKDMTPQRTSSD*HIHCIR
Trigger: TCTTATGCAATGAATGTGGCAATCGCTGGAAGTTCT...CTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp TCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATTCTCCAATTAGGCTCCGGGGTCTTGCTGTGTTaGCTGGGCTGGACTCAAACT +
Preference number: 4 (lower is better)
Translates to: SKRGSSIQILSIILQLGSGVLLC*LGWTQT
Trigger: AGTTTGAGTCCAGCCCAGGCAACACAGCAAGACCCC...GGAGCCTAATTGGAGAATGATGCTGAGAATTTGTATTGATGAACCTCTTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp AGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATTCCTTCCGTGTTCTTCCTaGCCACCATCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SPLQFLKEVHQYKFSASFLPCSS*PPSSPA
Trigger: AGCTGGAGAAGATGGTGGCCAGGAAGAACACGGAAG...GAATGATGCTGAGAATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR TCA 90 bp AATACCATCTGTGGAAGCACTTTCCAAAGAGGCGTGGTCCAAGTGCAGAATGTTATGATCTTCGATTTCTaGTGCCATCTTGTCACAGTT +
Preference number: 4 (lower is better)
Translates to: NTICGSTFQRGVVQVQNVMIFDF*CHLVTV
Trigger: AACTGTGACAAGATGGCATCAGAAATCGAAGATCAT...AACATTCTGCACTTGGACCACGCCTCTTTGGAAAGTGCTTCCACAGATGGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp CAAATTCTCAGCATCATTCTCCAATTAGGCTCCCCCATTAACCAATTGTTTCTATCCTTGTCTGAGCAGTaGTTGCGGACCCCATTAACA +
Preference number: 4 (lower is better)
Translates to: QILSIILQLGSPINQLFLSLSEQ*LRTPLT
Trigger: TGTTAATGGGGTCCGCAAGCACTGCTCAGACAAGGA...TAGAAACAATTGGTTAATGGGGGAGCCTAATTGGAGAATGATGCTGAGAATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp TCAACTGTGTCTTTAAAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTATCCATCCAAGTTACTaGCCCAAGTTATCCATCCAA +
Preference number: 4 (lower is better)
Translates to: STVSLKERFPESSYLSKTIHPSY*PKLSIQ
Trigger: TTGGATGGATAACTTGGGGCAGTAACTTGGATGGAT...AGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTTTAAAGACACAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR GCA 90 bp AACCACCGTGCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTTGCAGTTCTTCTTCTTaGATTTGCTGCACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: NHRAQPSAVSKRGSSIQICSSSS*ICCTGR
Trigger: TCTTCCAGTGCAGCAAATGCAAGAAGAAGAACTGCA...AATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGCACGGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp GCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCTGCAGTTCTTCTTCTTaGATTTGCTGCACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: AQPSAVSKRGSSIQILSICSSSS*ICCTGR
Trigger: TCTTCCAGTGCAGCAAATGCAAGAAGAAGAACTGCA...GATGCTGAGAATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp TCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATTCTCCAATTAGGCTCCTGGGCTCATCAGCACTaGGTGTCTGCACCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: SKRGSSIQILSIILQLGSWAHQH*VSAPGY
Trigger: ATAACCAGGTGCAGACACGCAGTGCTGATGAGCCCA...GGAGCCTAATTGGAGAATGATGCTGAGAATTTGTATTGATGAACCTCTTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp AAATACCATCTGTGGAAGCACTTTCCAAAGAGGCGTGGTCCAAGTGCAGAATGTTTTGTTTGGCTCCCATaGGTGAAAACAAAACTTCTG +
Preference number: 4 (lower is better)
Translates to: KYHLWKHFPKRRGPSAECFVWLP*VKTKLL
Trigger: CAGAAGTTTTGTTTTCACGCATGGGAGCCAAACAAA...ACATTCTGCACTTGGACCACGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp AAACCAGGGATCCTGACTTATCTTGTACTTCTTGCTAAGTACCTTAGAACTTTTAGCTGGATGGACATCTaGCAGCTGTGCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KPGILTYLVLLAKYLRTFSWMDI*QLCSFF
Trigger: GAAGAAGCTGCACAGCTGCCAGATGTCCATCCAGCT...AAAAGTTCTAAGGTACTTAGCAAGAAGTACAAGATAAGTCAGGATCCCTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp CAAATTCTCAGCATCATTCTCCAATTAGGCTCCCCCATTAACCAATTGTTTCTACCACAGAGTCTCTCCTaGTTTTGGGGTCTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: QILSIILQLGSPINQLFLPQSLS*FWGLLV
Trigger: AACGAGAAGACCCCAAAACCAGGAGAGACTCTGTGG...TAGAAACAATTGGTTAATGGGGGAGCCTAATTGGAGAATGATGCTGAGAATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp TCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATTCTCCAATTAGGCTCCAGGAGGCAGAAGACTTaGAGTCCACAGAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: SKRGSSIQILSIILQLGSRRQKT*SPQSLS
Trigger: GGAGAGACTCTGTGGACTCCAAGTCTTCTGCCTCCT...GGAGCCTAATTGGAGAATGATGCTGAGAATTTGTATTGATGAACCTCTTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp CAAATTCTCAGCATCATTCTCCAATTAGGCTCCCCCATTAACCAATTGTTTCTACACCGATGGTCTTTTTaGAGAGGAGGAGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: QILSIILQLGSPINQLFLHRWSF*RGGGRR
Trigger: TCTTCTGCCTCCTCCTCTCCAAAAAGACCATCGGTG...TAGAAACAATTGGTTAATGGGGGAGCCTAATTGGAGAATGATGCTGAGAATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp CTGTGGCCAGGTTCAAAGGAAATACCATCTGTGGAAGCACTTTCCAAAGAGGCGTCACATCATCAAACCTaGGAGAAAGGCATTATTATT +
Preference number: 4 (lower is better)
Translates to: LWPGSKEIPSVEALSKEASHHQT*EKGIII
Trigger: AATAATAATGCCTTTCTCCCAGGTTTGATGATGTGA...CGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTTCCTTTGAACCTGGCCACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp GTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGTCACATCATCAAACCTaGGAGAAAGGCATTATTATT +
Preference number: 4 (lower is better)
Translates to: VLLAKYLRTFGAPAACLVSHHQT*EKGIII
Trigger: AATAATAATGCCTTTCTCCCAGGTTTGATGATGTGA...CACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR TCA 90 bp CTCAGCATCATTCTCCAATTAGGCTCCCCCATTAACCAATTGTTTCTAATGACCCCATCTTGTCACAGTTaGCTCCATAGTCCTTGTAAT +
Preference number: 4 (lower is better)
Translates to: LSIILQLGSPINQLFLMTPSCHS*LHSPCN
Trigger: ATTACAAGGACTATGGAGTCAACTGTGACAAGATGG...GGTCATTAGAAACAATTGGTTAATGGGGGAGCCTAATTGGAGAATGATGCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR TCA 90 bp AACCACCGTGCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTATGATCTTCGATTTCTaGTGCCATCTTGTCACAGTT +
Preference number: 4 (lower is better)
Translates to: NHRAQPSAVSKRGSSIQIMIFDF*CHLVTV
Trigger: AACTGTGACAAGATGGCATCAGAAATCGAAGATCAT...AATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGCACGGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR TCA 90 bp GCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATGATCTTCGATTTCTaGTGCCATCTTGTCACAGTT +
Preference number: 4 (lower is better)
Translates to: AQPSAVSKRGSSIQILSIMIFDF*CHLVTV
Trigger: AACTGTGACAAGATGGCATCAGAAATCGAAGATCAT...GATGCTGAGAATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp GCAAAGTGTTTATGCATACATGATAACCCTCATATCAAAATGATCCTCACATCAGACATCTGGCAGCTGTaGAGCTTCTTCAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: AKCLCIHDNPHIKMILTSDIWQL*SFFRRS
Trigger: GGACCTTCTGAAGAAGCTGCACAGCTGCCAGATGTC...TGATGTGAGGATCATTTTGATATGAGGGTTATCATGTATGCATAAACACTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp AACCACCGTGCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTTCTCCGCTTTTGATTTaGTGCTGTTTGATCTTTCCA +
Preference number: 4 (lower is better)
Translates to: NHRAQPSAVSKRGSSIQISPLLI*CCLIFP
Trigger: TGGAAAGATCAAACAGCAGCAAATCAAAAGCGGAGA...AATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGCACGGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp GCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCTCTCCGCTTTTGATTTaGTGCTGTTTGATCTTTCCA +
Preference number: 4 (lower is better)
Translates to: AQPSAVSKRGSSIQILSISPLLI*CCLIFP
Trigger: TGGAAAGATCAAACAGCAGCAAATCAAAAGCGGAGA...GATGCTGAGAATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp AGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATTCCAGCAACTCCAATCCTaGTTGTCTGTAGTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SPLQFLKEVHQYKFSASFQQLQS*LSVVAG
Trigger: TCCAGCTACTACAGACAACCAGGATTGGAGTTGCTG...GAATGATGCTGAGAATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp TCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATTCTCCAATTAGGCTCCCCACAGAGTCTCTCCTaGTTTTGGGGTCTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: SKRGSSIQILSIILQLGSPQSLS*FWGLLV
Trigger: AACGAGAAGACCCCAAAACCAGGAGAGACTCTGTGG...GGAGCCTAATTGGAGAATGATGCTGAGAATTTGTATTGATGAACCTCTTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp GCAAAGTGTTTATGCATACATGATAACCCTCATATCAAAATGATCCTCACATCACTTCCGTGTTCTTCCTaGCCACCATCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: AKCLCIHDNPHIKMILTSLPCSS*PPSSPA
Trigger: AGCTGGAGAAGATGGTGGCCAGGAAGAACACGGAAG...TGATGTGAGGATCATTTTGATATGAGGGTTATCATGTATGCATAAACACTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp GCAAAGTGTTTATGCATACATGATAACCCTCATATCAAAATGATCCTCACATCACCTGTTTCCCATCCTTaGCTGTGGCCAGGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: AKCLCIHDNPHIKMILTSPVSHP*LWPGSK
Trigger: CTTTGAACCTGGCCACAGCCAAGGATGGGAAACAGG...TGATGTGAGGATCATTTTGATATGAGGGTTATCATGTATGCATAAACACTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp GCAAAGTGTTTATGCATACATGATAACCCTCATATCAAAATGATCCTCACATCATTCCTTCAGGAGACTTaGCAGGAAGGAGCACTCTGG +
Preference number: 4 (lower is better)
Translates to: AKCLCIHDNPHIKMILTSFLQET*QEGALW
Trigger: CCAGAGTGCTCCTTCCTGCCAAGTCTCCTGAAGGAA...TGATGTGAGGATCATTTTGATATGAGGGTTATCATGTATGCATAAACACTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CCA 90 bp GCAAAGTGTTTATGCATACATGATAACCCTCATATCAAAATGATCCTCACATCAGGCCCAGACATCACATaGTGCACATGCAAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: AKCLCIHDNPHIKMILTSGPDIT*CTCKSE
Trigger: CTCTGACTTGCATGTGCACCATGTGATGTCTGGGCC...TGATGTGAGGATCATTTTGATATGAGGGTTATCATGTATGCATAAACACTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR TCA 90 bp TCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATTCTCCAATTAGGCTCCTTCTGGCTTCCAGTCTaGACACTCAAGCCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SKRGSSIQILSIILQLGSFWLPV*TLKPFF
Trigger: GAAAAAGGGCTTGAGTGTTCAGACTGGAAGCCAGAA...GGAGCCTAATTGGAGAATGATGCTGAGAATTTGTATTGATGAACCTCTTTTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR TCA 90 bp CTGACTTATCTTGTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCACCATCTTGTCACAGTTaGCTCCATAGTCCTTGTAAT +
Preference number: 4 (lower is better)
Translates to: LTYLVLLAKYLRTFGAPAPSCHS*LHSPCN
Trigger: ATTACAAGGACTATGGAGTCAACTGTGACAAGATGG...TGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTACAAGATAAGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp CAAATTCTCAGCATCATTCTCCAATTAGGCTCCCCCATTAACCAATTGTTTCTACCGCTTTTGATTTGCTaGTGTTTGATCTTTCCACCG +
Preference number: 4 (lower is better)
Translates to: QILSIILQLGSPINQLFLPLLIC*CLIFPP
Trigger: CGGTGGAAAGATCAAACAGCAGCAAATCAAAAGCGG...TAGAAACAATTGGTTAATGGGGGAGCCTAATTGGAGAATGATGCTGAGAATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp TCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATTCTCCAATTAGGCTCCTCTTCTTGCATTTGCTaGACTGGAAGAGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: SKRGSSIQILSIILQLGSSSCIC*TGRGQW
Trigger: CCACTGACCTCTTCCAGTGCAGCAAATGCAAGAAGA...GGAGCCTAATTGGAGAATGATGCTGAGAATTTGTATTGATGAACCTCTTTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp TCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATTCTCCAATTAGGCTCCCTCAAAGCAAACGTCTaGCAGCCCACTGTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: SKRGSSIQILSIILQLGSLKANV*QPTVKD
Trigger: ATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAG...GGAGCCTAATTGGAGAATGATGCTGAGAATTTGTATTGATGAACCTCTTTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR TCA 90 bp TCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATTCTCCAATTAGGCTCCTCATGTCCGTGCTCTTaGGCTCTTGGTAGATATGAT +
Preference number: 4 (lower is better)
Translates to: SKRGSSIQILSIILQLGSSCPCS*ALGRYD
Trigger: ATCATATCTACCAAGAGCTCAAGAGCACGGACATGA...GGAGCCTAATTGGAGAATGATGCTGAGAATTTGTATTGATGAACCTCTTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR GCA 90 bp AAACCAGGGATCCTGACTTATCTTGTACTTCTTGCTAAGTACCTTAGAACTTTTCCGCTTTTGATTTGCTaGTGTTTGATCTTTCCACCG +
Preference number: 4 (lower is better)
Translates to: KPGILTYLVLLAKYLRTFPLLIC*CLIFPP
Trigger: CGGTGGAAAGATCAAACAGCAGCAAATCAAAAGCGG...AAAAGTTCTAAGGTACTTAGCAAGAAGTACAAGATAAGTCAGGATCCCTGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp AGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATTCGCACCTGGTTATAGGTaGAGTTCTTCTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: SPLQFLKEVHQYKFSASFAPGYR*SSSSCI
Trigger: AATGCAAGAAGAAGAACTGCACCTATAACCAGGTGC...GAATGATGCTGAGAATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CCA 90 bp CTGACTTATCTTGTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCATCTGAGTTACAGACTTaGGTAAGACTTTCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LTYLVLLAKYLRTFGAPASELQT*VRLSEL
Trigger: AAGCTCTGAAAGTCTTACCCAAGTCTGTAACTCAGA...TGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTACAAGATAAGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
3UTR CAA 72 bp CATCAAACCTGGGAGAAAGGCATTATTATTACTCTTTaGCTCAATGAGGTGAGTAACATGCTCAGCATGAGT +
Preference number: 4 (lower is better)
Translates to: HQTWEKGIIITL*LNEVSNMLSMS
Trigger: ACTCATGCTGAGCATGTTACTCACCTCATTGAGCAAAAGAGTAATAATAATGCCTTTCTCCCAGGTTTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR TCA 90 bp AAACCAGGGATCCTGACTTATCTTGTACTTCTTGCTAAGTACCTTAGAACTTTTCCATCTTGTCACAGTTaGCTCCATAGTCCTTGTAAT +
Preference number: 4 (lower is better)
Translates to: KPGILTYLVLLAKYLRTFPSCHS*LHSPCN
Trigger: ATTACAAGGACTATGGAGTCAACTGTGACAAGATGG...AAAAGTTCTAAGGTACTTAGCAAGAAGTACAAGATAAGTCAGGATCCCTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR GCA 90 bp AAACCAGGGATCCTGACTTATCTTGTACTTCTTGCTAAGTACCTTAGAACTTTTTCTCCGCTTTTGATTTaGTGCTGTTTGATCTTTCCA +
Preference number: 4 (lower is better)
Translates to: KPGILTYLVLLAKYLRTFSPLLI*CCLIFP
Trigger: TGGAAAGATCAAACAGCAGCAAATCAAAAGCGGAGA...AAAAGTTCTAAGGTACTTAGCAAGAAGTACAAGATAAGTCAGGATCCCTGGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp CTGGCTGGCTGGCTGGAATTCGTGTCTGGGCAGCATTTCAGGCAGCCACACTCATCTTCCTGGCCCATGTaGGCCCGCGACGCCCGGCGG +
Preference number: 5 (lower is better)
Translates to: LAGWLEFVSGQHFRQPHSSSWPM*ARDARR
Trigger: CCGCCGGGCGTCGCGGGCCAACATGGGCCAGGAAGA...TGAGTGTGGCTGCCTGAAATGCTGCCCAGACACGAATTCCAGCCAGCCAGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CAA 90 bp CAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATTTATCAACAGTCTTCCTGGCCCATGTaGGCCCGCGACGCCCGGCGG +
Preference number: 5 (lower is better)
Translates to: QTAERASSAGVGGWIYQQSSWPM*ARDARR
Trigger: CCGCCGGGCGTCGCGGGCCAACATGGGCCAGGAAGA...CTGTTGATAAATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CAA 90 bp CTGGTCCCGCCTCCCCGGTTAGGAGCTGGCTGGCTGGCTGGAATTCGTGTCTGGGGCCGGGGTGGGAGGTaGGATTTATCAACAGCTTCC +
Preference number: 5 (lower is better)
Translates to: LVPPPRLGAGWLAGIRVWGRGGR*DLSTAS
Trigger: GGAAGCTGTTGATAAATCCAACCTCCCACCCCGGCC...CCAGACACGAATTCCAGCCAGCCAGCCAGCTCCTAACCGGGGAGGCGGGACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS GCA 90 bp CCAGGTCTGAGTAGAGGCATCTGGAGGCCGGGCCCGCTGCTTCTGTaGGCCACCTCGAGGGCATTTCAGTTACTGCATCAGCGAGCATGC +
Preference number: 5 (lower is better)
Translates to: PGLSRGIWRPGPLLL*ATSRAFQLLHQRAC
Trigger: GCATGCTCGCTGATGCAGTAACTGAAATGCCCTCGAGGTGGCGCACAGAAGCAGCGGGCCCGGCCTCCAGATGCCTCTACTCAGACCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374601.7
ENST00000461794.1
ENST00000634832.1
ENST00000635356.1
CDS-3UTR CAA 90 bp GAAAAGGCTGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCTCTTCCTGGCCCATGTaGGCCCGCGACGCCCGGCGG +
Preference number: 5 (lower is better)
Translates to: EKAGRSRWERRNSKQTSASSWPM*ARDARR
Trigger: CCGCCGGGCGTCGCGGGCCAACATGGGCCAGGAAGA...GGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCAGCCTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS CCA 90 bp GGCCCTGCTCTGCACGAGGCCGAGGGCCCAGGGCTAAGCCTGACATaGAGGATATCTGTAGCTTTGGTGAAACCTGAACCTAGGGTTGGG +
Preference number: 5 (lower is better)
Translates to: GPALHEAEGPGLSLT*RISVALVKPEPRVG
Trigger: CCCAACCCTAGGTTCAGGTTTCACCAAAGCTACAGATATCCTCCATGTCAGGCTTAGCCCTGGGCCCTCGGCCTCGTGCAGAGCAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492271.1
ENST00000634793.1
CDS-3UTR CAA 90 bp CTGGTCCCGCCTCCCCGGTTAGGAGCTGGCTGGCTGGCTGGAATTCGTGTCTGGCAACTCCAATCCTGGTaGTCTGTAGTAGCTGGATGG +
Preference number: 5 (lower is better)
Translates to: LVPPPRLGAGWLAGIRVWQLQSW*SVVAGW
Trigger: CCATCCAGCTACTACAGACAACCAGGATTGGAGTTG...CCAGACACGAATTCCAGCCAGCCAGCCAGCTCCTAACCGGGGAGGCGGGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS TCA 90 bp CTGCTGACAGCATCTCCACACACTTGTCCCGGACAGAGTCCCCTGTaGGATAGCAGGGGGCCAGGAGACACATGGAAGAGGCAAACGTGG +
Preference number: 5 (lower is better)
Translates to: LLTASPHTCPGQSPL*DSRGPGDTWKRQTW
Trigger: CCACGTTTGCCTCTTCCATGTGTCTCCTGGCCCCCTGCTATCTCACAGGGGACTCTGTCCGGGACAAGTGTGTGGAGATGCTGTCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450454.7
ENST00000476978.2
ENST00000635035.2
ENST00000635497.2
CDS-3UTR CAA 90 bp CTGGCTGGCTGGCTGGAATTCGTGTCTGGGCAGCATTTCAGGCAGCCACACTCAGGCCGGGGTGGGAGGTaGGATTTATCAACAGCTTCC +
Preference number: 5 (lower is better)
Translates to: LAGWLEFVSGQHFRQPHSGRGGR*DLSTAS
Trigger: GGAAGCTGTTGATAAATCCAACCTCCCACCCCGGCC...TGAGTGTGGCTGCCTGAAATGCTGCCCAGACACGAATTCCAGCCAGCCAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CAA 90 bp GGAACTGAGCCAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATTTGTCTGAGCAGTGCTaGCGGACCCCATTAACAGCA +
Preference number: 5 (lower is better)
Translates to: GTEPNCREGIIGRGGRLDLSEQC*RTPLTA
Trigger: TGCTGTTAATGGGGTCCGCAAGCACTGCTCAGACAA...ATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTGGCTCAGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CAA 90 bp GGAACTGAGCCAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATATCTTCTCCAGCTTTTaGGCGATCCTCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GTEPNCREGIIGRGGRLDIFSSF*AILSSS
Trigger: GGAGCTGCTGAGGATCGCCAAAAAGCTGGAGAAGAT...ATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTGGCTCAGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS TCA 90 bp GGCCACAAGGTGAGGACTGGGGCCTGGGTCCTGACCAGGCTTCTCTaGCTATTGTGTGGTCTTGGTACAGAGAGCAGGAGGATACAGACA +
Preference number: 5 (lower is better)
Translates to: GHKVRTGAWVLTRLL*LLCGLGTESRRIQT
Trigger: TGTCTGTATCCTCCTGCTCTCTGTACCAAGACCACACAATAGTCAGAGAAGCCTGGTCAGGACCCAGGCCCCAGTCCTCACCTTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461794.1
ENST00000635356.1
CDS-3UTR CAA 90 bp CGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGGTCTAAGGCGCTGCAGTAAGGACACCACCTCCTaGTCTGAGCAGTGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: RLPAHCQRYDTSGLRRCSKDTTS*SEQCLR
Trigger: CCGCAAGCACTGCTCAGACAAGGAGGTGGTGTCCTT...ACTGCAGCGCCTTAGACCTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp GCCAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATTTATCAACCCACCGATGGTCTTTTaGGAGAGGAGGAGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: AKLQRGHHRPGWEVGFINPPMVF*ERRRQK
Trigger: CTTCTGCCTCCTCCTCTCCAAAAAGACCATCGGTGG...GTTGATAAATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CAA 90 bp AACCACCGTGCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTTCTTCCTGGCCCATGTaGGCCCGCGACGCCCGGCGG +
Preference number: 5 (lower is better)
Translates to: NHRAQPSAVSKRGSSIQISSWPM*ARDARR
Trigger: CCGCCGGGCGTCGCGGGCCAACATGGGCCAGGAAGA...AATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGCACGGTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp GTTGCCTGGGCTGGACTCAAACTTCTGGGGTTAAGCGATTCTCCCACCTCAGCCGGGCTGCTAGGTGTTTaGGGGCTCTCCGCTTTTGAT +
Preference number: 5 (lower is better)
Translates to: VAWAGLKLLGLSDSPTSAGLLGV*GLSAFD
Trigger: ATCAAAAGCGGAGAGCCCCAAAACACCTAGCAGCCC...GGCTGAGGTGGGAGAATCGCTTAACCCCAGAAGTTTGAGTCCAGCCCAGGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS GCA 90 bp GGGCAGAAGGAAGGAGAGAGACGAGAAACAATCTGTCCTAGGTGGTaGTCTAACTTCATCCCCCGCCACCTGCTGGGTTCAAACCCTCTG +
Preference number: 5 (lower is better)
Translates to: GQKEGERRETICPRW*SNFIPRHLLGSNPL
Trigger: CAGAGGGTTTGAACCCAGCAGGTGGCGGGGGATGAAGTTAGAGCACCACCTAGGACAGATTGTTTCTCGTCTCTCTCCTTCCTTCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461794.1
ENST00000635356.1
CDS CCA 90 bp TGGGGCCTGGGTCCTGACCAGGCTTCTCTGACTATTGTGTGGTCTTaGTACAGAGAGCAGGAGGATACAGACAGACATGTGGCCGAAGGA +
Preference number: 5 (lower is better)
Translates to: WGLGPDQASLTIVWS*YREQEDTDRHVAEG
Trigger: TCCTTCGGCCACATGTCTGTCTGTATCCTCCTGCTCTCTGTACCAAGACCACACAATAGTCAGAGAAGCCTGGTCAGGACCCAGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461794.1
ENST00000635356.1
CDS-3UTR CAA 90 bp TGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCAGCCCACTAAGGACACCACCTCCTaGTCTGAGCAGTGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: WEIQMGEKELKANVCQPTKDTTS*SEQCLR
Trigger: CCGCAAGCACTGCTCAGACAAGGAGGTGGTGTCCTT...AGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS CCA 90 bp AAGGGGCAGAAGGAAGGAGAGAGACGAGAAACAATCTGTCCTAGGTaGTGCTCTAACTTCATCCCCCGCCACCTGCTGGGTTCAAACCCT +
Preference number: 5 (lower is better)
Translates to: KGQKEGERRETICPR*CSNFIPRHLLGSNP
Trigger: AGGGTTTGAACCCAGCAGGTGGCGGGGGATGAAGTTAGAGCACCACCTAGGACAGATTGTTTCTCGTCTCTCTCCTTCCTTCTGCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461794.1
ENST00000635356.1
CDS-3UTR CAA 90 bp GAAAAGGCTGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCAGCATCTCCACACACTaGTCCCGGACAGAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: EKAGRSRWERRNSKQTSASISTH*SRTESP
Trigger: AGGGGACTCTGTCCGGGACAAGTGTGTGGAGATGCT...GGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCAGCCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp GACATCACATGGTGCACATGCAAGTCAGAGAGCAGTTGGAAACTGACAATAGGCCTGGGGTCCTTGAGGTaGCTTATGCGGCTGCGCACG +
Preference number: 5 (lower is better)
Translates to: DITWCTCKSESSWKLTIGLGSLR*LMRLRT
Trigger: CGTGCGCAGCCGCATAAGCAACCTCAAGGACCCCAG...GCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCATGTGCACCATGTGATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp GCCAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATTTATCAACTTTTTGATAAGGACTTaGGCCAAGGACACCACCTCC +
Preference number: 5 (lower is better)
Translates to: AKLQRGHHRPGWEVGFINFLIRT*AKDTTS
Trigger: GGAGGTGGTGTCCTTGGCCAAAGTCCTTATCAAAAA...GTTGATAAATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CAA 90 bp GTTGCCTGGGCTGGACTCAAACTTCTGGGGTTAAGCGATTCTCCCACCTCAGCCTTTTTGATAAGGACTTaGGCCAAGGACACCACCTCC +
Preference number: 5 (lower is better)
Translates to: VAWAGLKLLGLSDSPTSAFLIRT*AKDTTS
Trigger: GGAGGTGGTGTCCTTGGCCAAAGTCCTTATCAAAAA...GGCTGAGGTGGGAGAATCGCTTAACCCCAGAAGTTTGAGTCCAGCCCAGGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp GCCAAACTGCAGAGAGGGCATCATCGGCCGGGGTGGGAGGTTGGATTTATCAACAGCCGCTTCCAGTTTTaGATAAGGACTTTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: AKLQRGHHRPGWEVGFINSRFQF*IRTLAK
Trigger: CTTGGCCAAAGTCCTTATCAAAAACTGGAAGCGGCT...GTTGATAAATCCAACCTCCCACCCCGGCCGATGATGCCCTCTCTGCAGTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CAA 90 bp GAGTCCTCCTACCTGAGCAAGACTAGGCTGTTTGGAGCATTTCTTCCCACCTTCCCACCGATGGTCTTTTaGGAGAGGAGGAGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: ESSYLSKTRLFGAFLPTFPPMVF*ERRRQK
Trigger: CTTCTGCCTCCTCCTCTCCAAAAAGACCATCGGTGG...GAAGGTGGGAAGAAATGCTCCAAACAGCCTAGTCTTGCTCAGGTAGGAGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CAA 90 bp TGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCAGCCCACTATCTTCTCCAGCTTTTaGGCGATCCTCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: WEIQMGEKELKANVCQPTIFSSF*AILSSS
Trigger: GGAGCTGCTGAGGATCGCCAAAAAGCTGGAGAAGAT...AGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp CCTGTTTCCCATCCTTGGCTGTGGCCAGGTTCAAAGGAAATACCATCTGTGGAAAGCATCTCCACACACTaGTCCCGGACAGAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: PVSHPWLWPGSKEIPSVESISTH*SRTESP
Trigger: AGGGGACTCTGTCCGGGACAAGTGTGTGGAGATGCT...TTCCACAGATGGTATTTCCTTTGAACCTGGCCACAGCCAAGGATGGGAAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp TTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGGCCCTCCTGTTTCCCATCCTaGGCTGTGGCCAGGTTCAAA +
Preference number: 5 (lower is better)
Translates to: FLLSTLELLEHLQPAWWPSCFPS*AVARFK
Trigger: TTTGAACCTGGCCACAGCCAAGGATGGGAAACAGGA...GGGCCACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp CTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGGCCCAGACATGGGAGGAGTCTTTGTTaGGCTCCCATGCGTGAAAAC +
Preference number: 5 (lower is better)
Translates to: LSTLELLEHLQPAWWPRHGRSLC*APMREN
Trigger: GTTTTCACGCATGGGAGCCAAACAAAGACTCCTCCC...ATGTCTGGGCCACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS GCA 90 bp TTGATAAGGACTTTGGCCAAGGACACCACCTCCTTGTCTGAGCAGTaGTTGCGGACCCCATTAACAGCAACTCCAATCCTGGTTGTCTGC +
Preference number: 5 (lower is better)
Translates to: LIRTLAKDTTSLSEQ*LRTPLTATPILVVC
Trigger: GCAGACAACCAGGATTGGAGTTGCTGTTAATGGGGTCCGCAAGCACTGCTCAGACAAGGAGGTGGTGTCCTTGGCCAAAGTCCTTATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492271.1
ENST00000634793.1
CDS-3UTR CAA 90 bp CTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGGCCCAGACATCAACTCCAATCCTGGTaGTCTGTAGTAGCTGGATGG +
Preference number: 5 (lower is better)
Translates to: LSTLELLEHLQPAWWPRHQLQSW*SVVAGW
Trigger: CCATCCAGCTACTACAGACAACCAGGATTGGAGTTG...ATGTCTGGGCCACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp GAAAAGGCTGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCTTGTCTGAGCAGTGCTaGCGGACCCCATTAACAGCA +
Preference number: 5 (lower is better)
Translates to: EKAGRSRWERRNSKQTSALSEQC*RTPLTA
Trigger: TGCTGTTAATGGGGTCCGCAAGCACTGCTCAGACAA...GGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCAGCCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp GTGTCTTTAAAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTAGGCTGAAGGACACCACCTCCTaGTCTGAGCAGTGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: VSLKERFPESSYLSKTRLKDTTS*SEQCLR
Trigger: CCGCAAGCACTGCTCAGACAAGGAGGTGGTGTCCTT...CAGCCTAGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTTTAAAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CAA 90 bp TCTGTGGAAGCACTTTCCAAAGAGGCGTGGTCCAAGTGCAGAATGTTTTTCCTCAAGGACACCACCTCCTaGTCTGAGCAGTGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: SVEALSKEAWSKCRMFFLKDTTS*SEQCLR
Trigger: CCGCAAGCACTGCTCAGACAAGGAGGTGGTGTCCTT...GAGGAAAAACATTCTGCACTTGGACCACGCCTCTTTGGAAAGTGCTTCCACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp GTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGCCACCGATGGTCTTTTaGGAGAGGAGGAGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: VLLAKYLRTFGAPAACLVPPMVF*ERRRQK
Trigger: CTTCTGCCTCCTCCTCTCCAAAAAGACCATCGGTGG...CACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp GCAGCATTTCAGGCAGCCACACTCATTTTGCTTTCAATGCACACGCCTGGGAACATCTTCTCCAGCTTTTaGGCGATCCTCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: AAFQAATLILLSMHTPGNIFSSF*AILSSS
Trigger: GGAGCTGCTGAGGATCGCCAAAAAGCTGGAGAAGAT...GTTCCCAGGCGTGTGCATTGAAAGCAAAATGAGTGTGGCTGCCTGAAATGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CAA 90 bp GAAAAGGCTGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCATCTTCTCCAGCTTTTaGGCGATCCTCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: EKAGRSRWERRNSKQTSAIFSSF*AILSSS
Trigger: GGAGCTGCTGAGGATCGCCAAAAAGCTGGAGAAGAT...GGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCAGCCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp TTGGAAACTGACAATAGGCACGTGACCACACTCTGTTCCTTCAGGAGACTTGGCGGGCTGCTAGGTGTTTaGGGGCTCTCCGCTTTTGAT +
Preference number: 5 (lower is better)
Translates to: LETDNRHVTTLCSFRRLGGLLGV*GLSAFD
Trigger: ATCAAAAGCGGAGAGCCCCAAAACACCTAGCAGCCC...GCCAAGTCTCCTGAAGGAACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp AAGGAACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGAGCATCTCCACACACTaGTCCCGGACAGAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: KELKANVCQPTVKDMTPQSISTH*SRTESP
Trigger: AGGGGACTCTGTCCGGGACAAGTGTGTGGAGATGCT...CTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp TCTGTGGAAGCACTTTCCAAAGAGGCGTGGTCCAAGTGCAGAATGTTTTTCCTCAGCATCTCCACACACTaGTCCCGGACAGAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: SVEALSKEAWSKCRMFFLSISTH*SRTESP
Trigger: AGGGGACTCTGTCCGGGACAAGTGTGTGGAGATGCT...GAGGAAAAACATTCTGCACTTGGACCACGCCTCTTTGGAAAGTGCTTCCACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp GCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCCTGGGGTCCTTGAGGTaGCTTATGCGGCTGCGCACG +
Preference number: 5 (lower is better)
Translates to: AQPSAVSKRGSSIQILSILGSLR*LMRLRT
Trigger: CGTGCGCAGCCGCATAAGCAACCTCAAGGACCCCAG...GATGCTGAGAATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp GTGAGTAACATGCTCAGCATGAGTAGGGCAGAATGGGACCTGAAACCAGGGATCGGGAGGAGTCTTTGTTaGGCTCCCATGCGTGAAAAC +
Preference number: 5 (lower is better)
Translates to: VSNMLSMSRAEWDLKPGIGRSLC*APMREN
Trigger: GTTTTCACGCATGGGAGCCAAACAAAGACTCCTCCC...GATCCCTGGTTTCAGGTCCCATTCTGCCCTACTCATGCTGAGCATGTTACTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS TCA 90 bp CCAGTTTTTGATAAGGACTTTGGCCAAGGACACCACCTCCTTGTCTaGGCAGTGCTTGCGGACCCCATTAACAGCAACTCCAATCCTGGT +
Preference number: 5 (lower is better)
Translates to: PVFDKDFGQGHHLLV*AVLADPINSNSNPG
Trigger: ACCAGGATTGGAGTTGCTGTTAATGGGGTCCGCAAGCACTGCTCAGACAAGGAGGTGGTGTCCTTGGCCAAAGTCCTTATCAAAAACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374601.7
ENST00000374602.2
ENST00000450454.7
ENST00000461794.1
ENST00000476978.2
ENST00000492271.1
ENST00000634793.1
ENST00000634832.1
ENST00000635035.2
ENST00000635356.1
ENST00000635366.1
ENST00000635497.2
CDS GCA 90 bp TTGATAAGGACTTTGGCCAAGGACACCACCTCCTTGTCTGAGCAGTaGTTGCGGACCCCATTAACAGCAACTCCAATCCTGGTTGTCTGT +
Preference number: 5 (lower is better)
Translates to: LIRTLAKDTTSLSEQ*LRTPLTATPILVVC
Trigger: ACAGACAACCAGGATTGGAGTTGCTGTTAATGGGGTCCGCAAGCACTGCTCAGACAAGGAGGTGGTGTCCTTGGCCAAAGTCCTTATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000374601.7
ENST00000374602.2
ENST00000450454.7
ENST00000461794.1
ENST00000476978.2
ENST00000634832.1
ENST00000635035.2
ENST00000635356.1
ENST00000635366.1
ENST00000635497.2
CDS CCA 90 bp AAAGTGAGAGGGTTAAGGCATAATCTGGGAATGGATACACAGGAATaGCTGCCATCATTGGCAGATCCTGCCCCAGCTCTACCACCACCT +
Preference number: 5 (lower is better)
Translates to: KVRGLRHNLGMDTQE*LPSLADPAPALPPP
Trigger: AGGTGGTGGTAGAGCTGGGGCAGGATCTGCCAATGATGGCAGCCATTCCTGTGTATCCATTCCCAGATTATGCCTTAACCCTCTCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492271.1
ENST00000634793.1
CDS-3UTR CAA 90 bp CCTGTTTCCCATCCTTGGCTGTGGCCAGGTTCAAAGGAAATACCATCTGTGGAATTGTCTGAGCAGTGCTaGCGGACCCCATTAACAGCA +
Preference number: 5 (lower is better)
Translates to: PVSHPWLWPGSKEIPSVELSEQC*RTPLTA
Trigger: TGCTGTTAATGGGGTCCGCAAGCACTGCTCAGACAA...TTCCACAGATGGTATTTCCTTTGAACCTGGCCACAGCCAAGGATGGGAAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp TGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCAGCCCACTAGCCGCTTCCAGTTTTaGATAAGGACTTTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: WEIQMGEKELKANVCQPTSRFQF*IRTLAK
Trigger: CTTGGCCAAAGTCCTTATCAAAAACTGGAAGCGGCT...AGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp TTGTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGCCACCGATGGTCTTTTaGGAGAGGAGGAGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: LYFLLSTLELLEHLQPAWPPMVF*ERRRQK
Trigger: CTTCTGCCTCCTCCTCTCCAAAAAGACCATCGGTGG...CCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp GCAGCATTTCAGGCAGCCACACTCATTTTGCTTTCAATGCACACGCCTGGGAACGCAGCCACACTCATTTaGCTTTCAATGCACACGCCT +
Preference number: 5 (lower is better)
Translates to: AAFQAATLILLSMHTPGNAATLI*LSMHTP
Trigger: AGGCGTGTGCATTGAAAGCAAAATGAGTGTGGCTGC...GTTCCCAGGCGTGTGCATTGAAAGCAAAATGAGTGTGGCTGCCTGAAATGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CAA 90 bp GAGTCCTCCTACCTGAGCAAGACTAGGCTGTTTGGAGCATTTCTTCCCACCTTCGCAGCCACACTCATTTaGCTTTCAATGCACACGCCT +
Preference number: 5 (lower is better)
Translates to: ESSYLSKTRLFGAFLPTFAATLI*LSMHTP
Trigger: AGGCGTGTGCATTGAAAGCAAAATGAGTGTGGCTGC...GAAGGTGGGAAGAAATGCTCCAAACAGCCTAGTCTTGCTCAGGTAGGAGGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CAA 90 bp GCAGCATTTCAGGCAGCCACACTCATTTTGCTTTCAATGCACACGCCTGGGAACGCAAGACTAGGCTGTTaGGAGCATTTCTTCCCACCT +
Preference number: 5 (lower is better)
Translates to: AAFQAATLILLSMHTPGNARLGC*EHFFPP
Trigger: AGGTGGGAAGAAATGCTCCAAACAGCCTAGTCTTGC...GTTCCCAGGCGTGTGCATTGAAAGCAAAATGAGTGTGGCTGCCTGAAATGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CAA 90 bp GAAAAGGCTGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCTGGGGCTCTCCGCTTTaGATTTGCTGCTGTTTGATC +
Preference number: 5 (lower is better)
Translates to: EKAGRSRWERRNSKQTSAWGSPL*ICCCLI
Trigger: GATCAAACAGCAGCAAATCAAAAGCGGAGAGCCCCA...GGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCAGCCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp CCTGTTTCCCATCCTTGGCTGTGGCCAGGTTCAAAGGAAATACCATCTGTGGAAACAAAACTTCTGCCTTaGCAGGAGCTGGGGCAGTCT +
Preference number: 5 (lower is better)
Translates to: PVSHPWLWPGSKEIPSVETKLLP*QELGQS
Trigger: AGACTGCCCCAGCTCCTGCAAAGGCAGAAGTTTTGT...TTCCACAGATGGTATTTCCTTTGAACCTGGCCACAGCCAAGGATGGGAAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp ATGCAAGTCAGAGAGCAGTTGGAAACTGACAATAGGCACGTGACCACACTCTGTGTTCCTTCAGGAGACTaGGCAGGAAGGAGCACTCTG +
Preference number: 5 (lower is better)
Translates to: MQVREQLETDNRHVTTLCVPSGD*AGRSTL
Trigger: CAGAGTGCTCCTTCCTGCCAAGTCTCCTGAAGGAAC...ACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp CCTTCCTGTTTCCCATCCTTGGCTGTGGCCAGGTTCAAAGGAAATACCATCTGTAGTACCTTAGAACTTTaGGAGCACCTGCAGCCTGCC +
Preference number: 5 (lower is better)
Translates to: PSCFPSLAVARFKGNTICSTLEL*EHLQPA
Trigger: GGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACT...ACAGATGGTATTTCCTTTGAACCTGGCCACAGCCAAGGATGGGAAACAGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS CCA 90 bp AGAAGGGGACACAGGCTGAATAGGACACTGGGATGGAGAAAGCTGTaGTTTCCTTTACCTTTCCACCGATGGTCTTTTTGGAGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: RRGHRLNRTLGWRKL*FPLPFHRWSFWRGG
Trigger: TCCTCCTCTCCAAAAAGACCATCGGTGGAAAGGTAAAGGAAACCACAGCTTTCTCCATCCCAGTGTCCTATTCAGCCTGTGTCCCCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374602.2
ENST00000635366.1
CDS-3UTR CAA 90 bp AAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTAGGCTGTTTGGAGCACAACTCCAATCCTGGTaGTCTGTAGTAGCTGGATGG +
Preference number: 5 (lower is better)
Translates to: KERFPESSYLSKTRLFGAQLQSW*SVVAGW
Trigger: CCATCCAGCTACTACAGACAACCAGGATTGGAGTTG...TGCTCCAAACAGCCTAGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CAA 90 bp GCAGCATTTCAGGCAGCCACACTCATTTTGCTTTCAATGCACACGCCTGGGAACTTTTTGATAAGGACTTaGGCCAAGGACACCACCTCC +
Preference number: 5 (lower is better)
Translates to: AAFQAATLILLSMHTPGNFLIRT*AKDTTS
Trigger: GGAGGTGGTGTCCTTGGCCAAAGTCCTTATCAAAAA...GTTCCCAGGCGTGTGCATTGAAAGCAAAATGAGTGTGGCTGCCTGAAATGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CAA 90 bp TGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCAGCCCACTTTGATTTGCTGCTGTTaGATCTTTCCACCGATGGTC +
Preference number: 5 (lower is better)
Translates to: WEIQMGEKELKANVCQPTLICCC*IFPPMV
Trigger: GACCATCGGTGGAAAGATCAAACAGCAGCAAATCAA...AGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp CCAGGTTCAAAGGAAATACCATCTGTGGAAGCACTTTCCAAAGAGGCGTGGTCCTGGGGCTCTCCGCTTTaGATTTGCTGCTGTTTGATC +
Preference number: 5 (lower is better)
Translates to: PGSKEIPSVEALSKEAWSWGSPL*ICCCLI
Trigger: GATCAAACAGCAGCAAATCAAAAGCGGAGAGCCCCA...GGACCACGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTTCCTTTGAACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp ATCTGTGGAAGCACTTTCCAAAGAGGCGTGGTCCAAGTGCAGAATGTTTTTCCTGGGCTGCTAGGTGTTTaGGGGCTCTCCGCTTTTGAT +
Preference number: 5 (lower is better)
Translates to: ICGSTFQRGVVQVQNVFPGLLGV*GLSAFD
Trigger: ATCAAAAGCGGAGAGCCCCAAAACACCTAGCAGCCC...AGGAAAAACATTCTGCACTTGGACCACGCCTCTTTGGAAAGTGCTTCCACAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp TGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCAGCCCACTCGTGCTCTTGAGCTCTaGGTAGATATGATCTTCGAT +
Preference number: 5 (lower is better)
Translates to: WEIQMGEKELKANVCQPTRALEL*VDMIFD
Trigger: ATCGAAGATCATATCTACCAAGAGCTCAAGAGCACG...AGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp TTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGGCCCCGTGCTCTTGAGCTCTaGGTAGATATGATCTTCGAT +
Preference number: 5 (lower is better)
Translates to: FLLSTLELLEHLQPAWWPRALEL*VDMIFD
Trigger: ATCGAAGATCATATCTACCAAGAGCTCAAGAGCACG...GGGCCACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp CTGACTTATCTTGTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCACTGGGGTCCTTGAGGTaGCTTATGCGGCTGCGCACG +
Preference number: 5 (lower is better)
Translates to: LTYLVLLAKYLRTFGAPALGSLR*LMRLRT
Trigger: CGTGCGCAGCCGCATAAGCAACCTCAAGGACCCCAG...TGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTACAAGATAAGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp GACATCACATGGTGCACATGCAAGTCAGAGAGCAGTTGGAAACTGACAATAGGCTCCTGTTTCCCATCCTaGGCTGTGGCCAGGTTCAAA +
Preference number: 5 (lower is better)
Translates to: DITWCTCKSESSWKLTIGSCFPS*AVARFK
Trigger: TTTGAACCTGGCCACAGCCAAGGATGGGAAACAGGA...GCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCATGTGCACCATGTGATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp GACATCACATGGTGCACATGCAAGTCAGAGAGCAGTTGGAAACTGACAATAGGCACAAAACTTCTGCCTTaGCAGGAGCTGGGGCAGTCT +
Preference number: 5 (lower is better)
Translates to: DITWCTCKSESSWKLTIGTKLLP*QELGQS
Trigger: AGACTGCCCCAGCTCCTGCAAAGGCAGAAGTTTTGT...GCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCATGTGCACCATGTGATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS GCA 90 bp CAGTGCTTGCGGACCCCATTAACAGCAACTCCAATCCTGGTTGTCTaGAAAGTGAGAGGGTTAAGGCATAATCTGGGAATGGATACACAG +
Preference number: 5 (lower is better)
Translates to: QCLRTPLTATPILVV*KVRGLRHNLGMDTQ
Trigger: CTGTGTATCCATTCCCAGATTATGCCTTAACCCTCTCACTTTGCAGACAACCAGGATTGGAGTTGCTGTTAATGGGGTCCGCAAGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492271.1
ENST00000634793.1
CDS-3UTR CAA 90 bp AAGGAACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGCAACTCCAATCCTGGTaGTCTGTAGTAGCTGGATGG +
Preference number: 5 (lower is better)
Translates to: KELKANVCQPTVKDMTPQQLQSW*SVVAGW
Trigger: CCATCCAGCTACTACAGACAACCAGGATTGGAGTTG...CTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp AAATACCATCTGTGGAAGCACTTTCCAAAGAGGCGTGGTCCAAGTGCAGAATGTTTGTCTGAGCAGTGCTaGCGGACCCCATTAACAGCA +
Preference number: 5 (lower is better)
Translates to: KYHLWKHFPKRRGPSAECLSEQC*RTPLTA
Trigger: TGCTGTTAATGGGGTCCGCAAGCACTGCTCAGACAA...ACATTCTGCACTTGGACCACGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp AAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTAGGCTGTTTGGAGCAAGCCGCTTCCAGTTTTaGATAAGGACTTTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: KERFPESSYLSKTRLFGASRFQF*IRTLAK
Trigger: CTTGGCCAAAGTCCTTATCAAAAACTGGAAGCGGCT...TGCTCCAAACAGCCTAGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CAA 90 bp AACCACCGTGCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTCCACCGATGGTCTTTTaGGAGAGGAGGAGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: NHRAQPSAVSKRGSSIQIPPMVF*ERRRQK
Trigger: CTTCTGCCTCCTCCTCTCCAAAAAGACCATCGGTGG...AATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGCACGGTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp GAGTCCTCCTACCTGAGCAAGACTAGGCTGTTTGGAGCATTTCTTCCCACCTTCGAGCATTTACATGGTTaGGGAACAGTGCTGGGTATT +
Preference number: 5 (lower is better)
Translates to: ESSYLSKTRLFGAFLPTFEHLHG*GTVLGI
Trigger: AATACCCAGCACTGTTCCCAAACCATGTAAATGCTC...GAAGGTGGGAAGAAATGCTCCAAACAGCCTAGTCTTGCTCAGGTAGGAGGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CAA 90 bp GACATCACATGGTGCACATGCAAGTCAGAGAGCAGTTGGAAACTGACAATAGGCTGGGGCTCTCCGCTTTaGATTTGCTGCTGTTTGATC +
Preference number: 5 (lower is better)
Translates to: DITWCTCKSESSWKLTIGWGSPL*ICCCLI
Trigger: GATCAAACAGCAGCAAATCAAAAGCGGAGAGCCCCA...GCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCATGTGCACCATGTGATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp AGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATTCCTGGGGTCCTTGAGGTaGCTTATGCGGCTGCGCACG +
Preference number: 5 (lower is better)
Translates to: SPLQFLKEVHQYKFSASFLGSLR*LMRLRT
Trigger: CGTGCGCAGCCGCATAAGCAACCTCAAGGACCCCAG...GAATGATGCTGAGAATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp AAGGAACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGTTCTTCTTCCTCACCTaGTTCATGGCTGGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: KELKANVCQPTVKDMTPQFFFLT*FMAGCS
Trigger: GGAACAGCCAGCCATGAACAAGGTGAGGAAGAAGAA...CTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp AAATACCATCTGTGGAAGCACTTTCCAAAGAGGCGTGGTCCAAGTGCAGAATGTAGTACCTTAGAACTTTaGGAGCACCTGCAGCCTGCC +
Preference number: 5 (lower is better)
Translates to: KYHLWKHFPKRRGPSAECSTLEL*EHLQPA
Trigger: GGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACT...ACATTCTGCACTTGGACCACGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp GCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCTTGTCTGAGCAGTGCTaGCGGACCCCATTAACAGCA +
Preference number: 5 (lower is better)
Translates to: AQPSAVSKRGSSIQILSILSEQC*RTPLTA
Trigger: TGCTGTTAATGGGGTCCGCAAGCACTGCTCAGACAA...GATGCTGAGAATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp ATGCAAGTCAGAGAGCAGTTGGAAACTGACAATAGGCACGTGACCACACTCTGTAGCCGCTTCCAGTTTTaGATAAGGACTTTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: MQVREQLETDNRHVTTLCSRFQF*IRTLAK
Trigger: CTTGGCCAAAGTCCTTATCAAAAACTGGAAGCGGCT...ACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp AAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTAGGCTGTTTGGAGCAGAGCATTTACATGGTTaGGGAACAGTGCTGGGTATT +
Preference number: 5 (lower is better)
Translates to: KERFPESSYLSKTRLFGAEHLHG*GTVLGI
Trigger: AATACCCAGCACTGTTCCCAAACCATGTAAATGCTC...TGCTCCAAACAGCCTAGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CAA 90 bp GTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGTTGATTTGCTGCTGTTaGATCTTTCCACCGATGGTC +
Preference number: 5 (lower is better)
Translates to: VLLAKYLRTFGAPAACLVLICCC*IFPPMV
Trigger: GACCATCGGTGGAAAGATCAAACAGCAGCAAATCAA...CACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp CTGTGGCCAGGTTCAAAGGAAATACCATCTGTGGAAGCACTTTCCAAAGAGGCGTTCTTCTTCTTGCATTaGCTGCACTGGAAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: LWPGSKEIPSVEALSKEAFFFLH*LHWKRS
Trigger: TGACCTCTTCCAGTGCAGCAAATGCAAGAAGAAGAA...CGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTTCCTTTGAACCTGGCCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp GTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCAGCCTGCCTGGTGTTCTTCTTCTTGCATTaGCTGCACTGGAAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: VLLAKYLRTFGAPAACLVFFFLH*LHWKRS
Trigger: TGACCTCTTCCAGTGCAGCAAATGCAAGAAGAAGAA...CACCAGGCAGGCTGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp AAGGAACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGGTGCAGTTCTTCTTCTaGCATTTGCTGCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: KELKANVCQPTVKDMTPQVQFFF*HLLHWK
Trigger: CTTCCAGTGCAGCAAATGCAAGAAGAAGAACTGCAC...CTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp TGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCAGCCCACTGGGGTAAGGTTTGTGTaGATCTGGCATTTTTCAATT +
Preference number: 5 (lower is better)
Translates to: WEIQMGEKELKANVCQPTGVRFV*IWHFSI
Trigger: AATTGAAAAATGCCAGATCAACACAAACCTTACCCC...AGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS TCA 90 bp CTTGGTAGATATGATCTTCGATTTCTGATGCCATCTTGTCACAGTTaGCTCCATAGTCCTTGTAATCATCGTCCGCCTTCAGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LGRYDLRFLMPSCHS*LHSPCNHRPPSGLL
Trigger: CAGCAGCCCTGAAGGCGGACGATGATTACAAGGACTATGGAGTCAACTGTGACAAGATGGCATCAGAAATCGAAGATCATATCTACCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450454.7
ENST00000476978.2
ENST00000635035.2
ENST00000635497.2
CDS-3UTR CAA 90 bp TCAACTGTGTCTTTAAAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTGCAAGACTAGGCTGTTaGGAGCATTTCTTCCCACCT +
Preference number: 5 (lower is better)
Translates to: STVSLKERFPESSYLSKTARLGC*EHFFPP
Trigger: AGGTGGGAAGAAATGCTCCAAACAGCCTAGTCTTGC...AGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTTTAAAGACACAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CAA 90 bp GACATCACATGGTGCACATGCAAGTCAGAGAGCAGTTGGAAACTGACAATAGGCTTGATTTGCTGCTGTTaGATCTTTCCACCGATGGTC +
Preference number: 5 (lower is better)
Translates to: DITWCTCKSESSWKLTIGLICCC*IFPPMV
Trigger: GACCATCGGTGGAAAGATCAAACAGCAGCAAATCAA...GCCTATTGTCAGTTTCCAACTGCTCTCTGACTTGCATGTGCACCATGTGATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp AAGGAACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGCGTGCTCTTGAGCTCTaGGTAGATATGATCTTCGAT +
Preference number: 5 (lower is better)
Translates to: KELKANVCQPTVKDMTPQRALEL*VDMIFD
Trigger: ATCGAAGATCATATCTACCAAGAGCTCAAGAGCACG...CTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp ACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGGTCTATTCTTCTTCTTGCATTaGCTGCACTGGAAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: TQSKRLPAHCQRYDTSGLFFFLH*LHWKRS
Trigger: TGACCTCTTCCAGTGCAGCAAATGCAAGAAGAAGAA...TAGACCTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp AAATACCATCTGTGGAAGCACTTTCCAAAGAGGCGTGGTCCAAGTGCAGAATGTGTGCAGTTCTTCTTCTaGCATTTGCTGCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: KYHLWKHFPKRRGPSAECVQFFF*HLLHWK
Trigger: CTTCCAGTGCAGCAAATGCAAGAAGAAGAACTGCAC...ACATTCTGCACTTGGACCACGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp TTGGAAACTGACAATAGGCACGTGACCACACTCTGTTCCTTCAGGAGACTTGGCCGATTGCCACATTCATaGCATAAGACAAAGGTAGTC +
Preference number: 5 (lower is better)
Translates to: LETDNRHVTTLCSFRRLGRLPHS*HKTKVV
Trigger: GACTACCTTTGTCTTATGCAATGAATGTGGCAATCG...GCCAAGTCTCCTGAAGGAACAGAGTGTGGTCACGTGCCTATTGTCAGTTTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp CTGTGGCCAGGTTCAAAGGAAATACCATCTGTGGAAGCACTTTCCAAAGAGGCGCGATTGCCACATTCATaGCATAAGACAAAGGTAGTC +
Preference number: 5 (lower is better)
Translates to: LWPGSKEIPSVEALSKEARLPHS*HKTKVV
Trigger: GACTACCTTTGTCTTATGCAATGAATGTGGCAATCG...CGCCTCTTTGGAAAGTGCTTCCACAGATGGTATTTCCTTTGAACCTGGCCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp GAAAAGGCTGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCGGGGTAAGGTTTGTGTaGATCTGGCATTTTTCAATT +
Preference number: 5 (lower is better)
Translates to: EKAGRSRWERRNSKQTSAGVRFV*IWHFSI
Trigger: AATTGAAAAATGCCAGATCAACACAAACCTTACCCC...GGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCAGCCTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp AAAGAGAGGTTTCCAGAGTCCTCCTACCTGAGCAAGACTAGGCTGTTTGGAGCAATCCTCACAATGACCTaGAAAGGGGTTCATAATTGT +
Preference number: 5 (lower is better)
Translates to: KERFPESSYLSKTRLFGAILTMT*KGVHNC
Trigger: ACAATTATGAACCCCTTTCAAGGTCATTGTGAGGAT...TGCTCCAAACAGCCTAGTCTTGCTCAGGTAGGAGGACTCTGGAAACCTCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CAA 90 bp ACTCAAAGCAAACGTCTGCCAGCCCACTGTCAAAGATATGACACCTCAGGTCTACGATTGCCACATTCATaGCATAAGACAAAGGTAGTC +
Preference number: 5 (lower is better)
Translates to: TQSKRLPAHCQRYDTSGLRLPHS*HKTKVV
Trigger: GACTACCTTTGTCTTATGCAATGAATGTGGCAATCG...TAGACCTGAGGTGTCATATCTTTGACAGTGGGCTGGCAGACGTTTGCTTTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp GAAAAGGCTGGGAGATCCAGATGGGAGAGAAGGAACTCAAAGCAAACGTCTGCCTCCCCCATTAACCAATaGTTTCTAATGACCGATTAT +
Preference number: 5 (lower is better)
Translates to: EKAGRSRWERRNSKQTSASPINQ*FLMTDY
Trigger: ATAATCGGTCATTAGAAACAATTGGTTAATGGGGGA...GGCAGACGTTTGCTTTGAGTTCCTTCTCTCCCATCTGGATCTCCCAGCCTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp ATCTGTGGAAGCACTTTCCAAAGAGGCGTGGTCCAAGTGCAGAATGTTTTTCCTTCCATCTTCCAGCGATaGCCACATTCATTGCATAAG +
Preference number: 5 (lower is better)
Translates to: ICGSTFQRGVVQVQNVFPSIFQR*PHSLHK
Trigger: CTTATGCAATGAATGTGGCAATCGCTGGAAGATGGA...AGGAAAAACATTCTGCACTTGGACCACGCCTCTTTGGAAAGTGCTTCCACAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp AATACCATCTGTGGAAGCACTTTCCAAAGAGGCGTGGTCCAAGTGCAGAATGTTTCCATCTTCCAGCGATaGCCACATTCATTGCATAAG +
Preference number: 5 (lower is better)
Translates to: NTICGSTFQRGVVQVQNVSIFQR*PHSLHK
Trigger: CTTATGCAATGAATGTGGCAATCGCTGGAAGATGGA...AACATTCTGCACTTGGACCACGCCTCTTTGGAAAGTGCTTCCACAGATGGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp TCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATTCTCCAATTAGGCTCCCCACCGATGGTCTTTTaGGAGAGGAGGAGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: SKRGSSIQILSIILQLGSPPMVF*ERRRQK
Trigger: CTTCTGCCTCCTCCTCTCCAAAAAGACCATCGGTGG...GGAGCCTAATTGGAGAATGATGCTGAGAATTTGTATTGATGAACCTCTTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp TCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATTCTCCAATTAGGCTCCGGGCTGCTAGGTGTTTaGGGGCTCTCCGCTTTTGAT +
Preference number: 5 (lower is better)
Translates to: SKRGSSIQILSIILQLGSGLLGV*GLSAFD
Trigger: ATCAAAAGCGGAGAGCCCCAAAACACCTAGCAGCCC...GGAGCCTAATTGGAGAATGATGCTGAGAATTTGTATTGATGAACCTCTTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp GCCCAGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCTTCTTCTTCTTGCATTaGCTGCACTGGAAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: AQPSAVSKRGSSIQILSIFFFLH*LHWKRS
Trigger: TGACCTCTTCCAGTGCAGCAAATGCAAGAAGAAGAA...GATGCTGAGAATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp AGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATTCCAACTCCAATCCTGGTaGTCTGTAGTAGCTGGATGG +
Preference number: 5 (lower is better)
Translates to: SPLQFLKEVHQYKFSASFQLQSW*SVVAGW
Trigger: CCATCCAGCTACTACAGACAACCAGGATTGGAGTTG...GAATGATGCTGAGAATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp AGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATTCTTTTTGATAAGGACTTaGGCCAAGGACACCACCTCC +
Preference number: 5 (lower is better)
Translates to: SPLQFLKEVHQYKFSASFFLIRT*AKDTTS
Trigger: GGAGGTGGTGTCCTTGGCCAAAGTCCTTATCAAAAA...GAATGATGCTGAGAATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp CAAATTCTCAGCATCATTCTCCAATTAGGCTCCCCCATTAACCAATTGTTTCTAAGCCGCTTCCAGTTTTaGATAAGGACTTTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: QILSIILQLGSPINQLFLSRFQF*IRTLAK
Trigger: CTTGGCCAAAGTCCTTATCAAAAACTGGAAGCGGCT...TAGAAACAATTGGTTAATGGGGGAGCCTAATTGGAGAATGATGCTGAGAATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp ACGAACCTGCCTGTCGCCCTTCCAAATTCTTTTCAACACATCAACTGTGTCTTTATCCTCACAATGACCTaGAAAGGGGTTCATAATTGT +
Preference number: 5 (lower is better)
Translates to: TNLPVALPNSFQHINCVFILTMT*KGVHNC
Trigger: ACAATTATGAACCCCTTTCAAGGTCATTGTGAGGAT...AAAGACACAGTTGATGTGTTGAAAAGAATTTGGAAGGGCGACAGGCAGGTTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374601.7
ENST00000634832.1
CDS-3UTR CAA 90 bp TCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATTCTCCAATTAGGCTCCTGGGGCTCTCCGCTTTaGATTTGCTGCTGTTTGATC +
Preference number: 5 (lower is better)
Translates to: SKRGSSIQILSIILQLGSWGSPL*ICCCLI
Trigger: GATCAAACAGCAGCAAATCAAAAGCGGAGAGCCCCA...GGAGCCTAATTGGAGAATGATGCTGAGAATTTGTATTGATGAACCTCTTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp CTGACTTATCTTGTACTTCTTGCTAAGTACCTTAGAACTTTTGGAGCACCTGCACGTGCTCTTGAGCTCTaGGTAGATATGATCTTCGAT +
Preference number: 5 (lower is better)
Translates to: LTYLVLLAKYLRTFGAPARALEL*VDMIFD
Trigger: ATCGAAGATCATATCTACCAAGAGCTCAAGAGCACG...TGCAGGTGCTCCAAAAGTTCTAAGGTACTTAGCAAGAAGTACAAGATAAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp AGCCCTCTGCAGTTTCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATTCGTGCAGTTCTTCTTCTaGCATTTGCTGCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: SPLQFLKEVHQYKFSASFVQFFF*HLLHWK
Trigger: CTTCCAGTGCAGCAAATGCAAGAAGAAGAACTGCAC...GAATGATGCTGAGAATTTGTATTGATGAACCTCTTTTAGAAACTGCAGAGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp CTCAGCATCATTCTCCAATTAGGCTCCCCCATTAACCAATTGTTTCTAATGACCCGATTGCCACATTCATaGCATAAGACAAAGGTAGTC +
Preference number: 5 (lower is better)
Translates to: LSIILQLGSPINQLFLMTRLPHS*HKTKVV
Trigger: GACTACCTTTGTCTTATGCAATGAATGTGGCAATCG...GGTCATTAGAAACAATTGGTTAATGGGGGAGCCTAATTGGAGAATGATGCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp AAACCAGGGATCCTGACTTATCTTGTACTTCTTGCTAAGTACCTTAGAACTTTTTTTTTGATAAGGACTTaGGCCAAGGACACCACCTCC +
Preference number: 5 (lower is better)
Translates to: KPGILTYLVLLAKYLRTFFLIRT*AKDTTS
Trigger: GGAGGTGGTGTCCTTGGCCAAAGTCCTTATCAAAAA...AAAAGTTCTAAGGTACTTAGCAAGAAGTACAAGATAAGTCAGGATCCCTGGTTT
41% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp GCAAAGTGTTTATGCATACATGATAACCCTCATATCAAAATGATCCTCACATCAAGCCGCTTCCAGTTTTaGATAAGGACTTTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: AKCLCIHDNPHIKMILTSSRFQF*IRTLAK
Trigger: CTTGGCCAAAGTCCTTATCAAAAACTGGAAGCGGCT...TGATGTGAGGATCATTTTGATATGAGGGTTATCATGTATGCATAAACACTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp TCTAAAAGAGGTTCATCAATACAAATTCTCAGCATCATTCTCCAATTAGGCTCCTTGATTTGCTGCTGTTaGATCTTTCCACCGATGGTC +
Preference number: 5 (lower is better)
Translates to: SKRGSSIQILSIILQLGSLICCC*IFPPMV
Trigger: GACCATCGGTGGAAAGATCAAACAGCAGCAAATCAA...GGAGCCTAATTGGAGAATGATGCTGAGAATTTGTATTGATGAACCTCTTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS-3UTR CAA 90 bp GCAAAGTGTTTATGCATACATGATAACCCTCATATCAAAATGATCCTCACATCAGTGCAGTTCTTCTTCTaGCATTTGCTGCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: AKCLCIHDNPHIKMILTSVQFFF*HLLHWK
Trigger: CTTCCAGTGCAGCAAATGCAAGAAGAAGAACTGCAC...TGATGTGAGGATCATTTTGATATGAGGGTTATCATGTATGCATAAACACTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476978.2
ENST00000635497.2
CDS-3UTR CAA 90 bp CAAATTCTCAGCATCATTCTCCAATTAGGCTCCCCCATTAACCAATTGTTTCTATCCCCCATTAACCAATaGTTTCTAATGACCGATTAT +
Preference number: 5 (lower is better)
Translates to: QILSIILQLGSPINQLFLSPINQ*FLMTDY
Trigger: ATAATCGGTCATTAGAAACAATTGGTTAATGGGGGA...TAGAAACAATTGGTTAATGGGGGAGCCTAATTGGAGAATGATGCTGAGAATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000450454.7
ENST00000635035.2
CDS GCA 72 bp AGTAGAGGCATCTGGAGGCCGGGCCCGCTGCTTCTGTaGGCCACCTCGAGGGCATTTCAGTTACTGCATCAG +
Preference number: 6 (lower is better)
Translates to: SRGIWRPGPLLL*ATSRAFQLLHQ
Trigger: CTGATGCAGTAACTGAAATGCCCTCGAGGTGGCGCACAGAAGCAGCGGGCCCGGCCTCCAGATGCCTCTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374601.7
ENST00000461794.1
ENST00000634832.1
ENST00000635356.1
CDS CAA 90 bp GCCGAGGGCCCAGGGCTAAGCCTGACATGGAGGATATCTGTAGCTTaGGTGAAACCTGAACCTAGGGTTGGGGGTGGCACTTGGCTGACT +
Preference number: 6 (lower is better)
Translates to: AEGPGLSLTWRISVA*VKPEPRVGGGTWLT
Trigger: AGTCAGCCAAGTGCCACCCCCAACCCTAGGTTCAGGTTTCACCAAAGCTACAGATATCCTCCATGTCAGGCTTAGCCCTGGGCCCTCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492271.1
ENST00000634793.1
CDS TCA 72 bp GTGAGGACTGGGGCCTGGGTCCTGACCAGGCTTCTCTaGCTATTGTGTGGTCTTGGTACAGAGAGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: VRTGAWVLTRLL*LLCGLGTESRR
Trigger: CCTCCTGCTCTCTGTACCAAGACCACACAATAGTCAGAGAAGCCTGGTCAGGACCCAGGCCCCAGTCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374602.2
ENST00000461794.1
ENST00000635356.1
ENST00000635366.1
CDS CAA 90 bp GGTCCAGGGGAGTCTAGCAGCCGCTTCCAGTTTTTGATAAGGACTTaGGCCAAGGACACCACCTCCTTGTCTGAGCAGTGCTTGCGGACC +
Preference number: 6 (lower is better)
Translates to: GPGESSSRFQFLIRT*AKDTTSLSEQCLRT
Trigger: GGTCCGCAAGCACTGCTCAGACAAGGAGGTGGTGTCCTTGGCCAAAGTCCTTATCAAAAACTGGAAGCGGCTGCTAGACTCCCCTGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374601.7
ENST00000374602.2
ENST00000450454.7
ENST00000461794.1
ENST00000476978.2
ENST00000492271.1
ENST00000634793.1
ENST00000634832.1
ENST00000635035.2
ENST00000635356.1
ENST00000635366.1
ENST00000635497.2
CDS CCA 72 bp CTGCACGAGGCCGAGGGCCCAGGGCTAAGCCTGACATaGAGGATATCTGTAGCTTTGGTGAAACCTGAACCT +
Preference number: 6 (lower is better)
Translates to: LHEAEGPGLSLT*RISVALVKPEP
Trigger: AGGTTCAGGTTTCACCAAAGCTACAGATATCCTCCATGTCAGGCTTAGCCCTGGGCCCTCGGCCTCGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492271.1
ENST00000634793.1
CDS TCA 72 bp GATAAGGACTTTGGCCAAGGACACCACCTCCTTGTCTaGGCAGTGCTTGCGGACCCCATTAACAGCAACTCC +
Preference number: 6 (lower is better)
Translates to: DKDFGQGHHLLV*AVLADPINSNS
Trigger: GGAGTTGCTGTTAATGGGGTCCGCAAGCACTGCTCAGACAAGGAGGTGGTGTCCTTGGCCAAAGTCCTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374601.7
ENST00000374602.2
ENST00000450454.7
ENST00000461794.1
ENST00000476978.2
ENST00000492271.1
ENST00000634793.1
ENST00000634832.1
ENST00000635035.2
ENST00000635356.1
ENST00000635366.1
ENST00000635497.2
CDS GCA 72 bp ACTTTGGCCAAGGACACCACCTCCTTGTCTGAGCAGTaGTTGCGGACCCCATTAACAGCAACTCCAATCCTG +
Preference number: 6 (lower is better)
Translates to: TLAKDTTSLSEQ*LRTPLTATPIL
Trigger: CAGGATTGGAGTTGCTGTTAATGGGGTCCGCAAGCACTGCTCAGACAAGGAGGTGGTGTCCTTGGCCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374601.7
ENST00000374602.2
ENST00000450454.7
ENST00000461794.1
ENST00000476978.2
ENST00000492271.1
ENST00000634793.1
ENST00000634832.1
ENST00000635035.2
ENST00000635356.1
ENST00000635366.1
ENST00000635497.2
CDS GCA 72 bp GAAGGAGAGAGACGAGAAACAATCTGTCCTAGGTGGTaGTCTAACTTCATCCCCCGCCACCTGCTGGGTTCA +
Preference number: 6 (lower is better)
Translates to: EGERRETICPRW*SNFIPRHLLGS
Trigger: TGAACCCAGCAGGTGGCGGGGGATGAAGTTAGAGCACCACCTAGGACAGATTGTTTCTCGTCTCTCTCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461794.1
ENST00000635356.1
CDS CCA 72 bp AAGGAAGGAGAGAGACGAGAAACAATCTGTCCTAGGTaGTGCTCTAACTTCATCCCCCGCCACCTGCTGGGT +
Preference number: 6 (lower is better)
Translates to: KEGERRETICPR*CSNFIPRHLLG
Trigger: ACCCAGCAGGTGGCGGGGGATGAAGTTAGAGCACCACCTAGGACAGATTGTTTCTCGTCTCTCTCCTTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461794.1
ENST00000635356.1
CDS CAA 72 bp GCATCAGCGAGCATGCTCTTTCCACCGATGGTCTTTTaGGAGAGGAGGAGGCAGAAGACTTGGAGTCCACAG +
Preference number: 6 (lower is better)
Translates to: ASASMLFPPMVF*ERRRQKTWSPQ
Trigger: CTGTGGACTCCAAGTCTTCTGCCTCCTCCTCTCCAAAAAGACCATCGGTGGAAAGAGCATGCTCGCTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374601.7
ENST00000461794.1
ENST00000634832.1
ENST00000635356.1
CDS CAA 72 bp CCAGGGCTAAGCCTGACATGGAGGATATCTGTAGCTTaGGTGAAACCTGAACCTAGGGTTGGGGGTGGCACT +
Preference number: 6 (lower is better)
Translates to: PGLSLTWRISVA*VKPEPRVGGGT
Trigger: AGTGCCACCCCCAACCCTAGGTTCAGGTTTCACCAAAGCTACAGATATCCTCCATGTCAGGCTTAGCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492271.1
ENST00000634793.1
CDS CAA 72 bp GAGTCTAGCAGCCGCTTCCAGTTTTTGATAAGGACTTaGGCCAAGGACACCACCTCCTTGTCTGAGCAGTGC +
Preference number: 6 (lower is better)
Translates to: ESSSRFQFLIRT*AKDTTSLSEQC
Trigger: GCACTGCTCAGACAAGGAGGTGGTGTCCTTGGCCAAAGTCCTTATCAAAAACTGGAAGCGGCTGCTAGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374601.7
ENST00000374602.2
ENST00000450454.7
ENST00000461794.1
ENST00000476978.2
ENST00000492271.1
ENST00000634793.1
ENST00000634832.1
ENST00000635035.2
ENST00000635356.1
ENST00000635366.1
ENST00000635497.2
CDS CAA 90 bp ATAAGGACTTTGGCCAAGGACACCACCTCCTTGTCTGAGCAGTGCTaGCGGACCCCATTAACAGCAACTCCAATCCTGGTTGTCTGTAGT +
Preference number: 6 (lower is better)
Translates to: IRTLAKDTTSLSEQC*RTPLTATPILVVCS
Trigger: ACTACAGACAACCAGGATTGGAGTTGCTGTTAATGGGGTCCGCAAGCACTGCTCAGACAAGGAGGTGGTGTCCTTGGCCAAAGTCCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000374601.7
ENST00000374602.2
ENST00000450454.7
ENST00000461794.1
ENST00000476978.2
ENST00000634832.1
ENST00000635035.2
ENST00000635356.1
ENST00000635366.1
ENST00000635497.2
CDS CAA 90 bp CGCTTCCAGTTTTTGATAAGGACTTTGGCCAAGGACACCACCTCCTaGTCTGAGCAGTGCTTGCGGACCCCATTAACAGCAACTCCAATC +
Preference number: 6 (lower is better)
Translates to: RFQFLIRTLAKDTTS*SEQCLRTPLTATPI
Trigger: GATTGGAGTTGCTGTTAATGGGGTCCGCAAGCACTGCTCAGACAAGGAGGTGGTGTCCTTGGCCAAAGTCCTTATCAAAAACTGGAAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374601.7
ENST00000374602.2
ENST00000450454.7
ENST00000461794.1
ENST00000476978.2
ENST00000492271.1
ENST00000634793.1
ENST00000634832.1
ENST00000635035.2
ENST00000635356.1
ENST00000635366.1
ENST00000635497.2
CDS CAA 90 bp ATAAGGACTTTGGCCAAGGACACCACCTCCTTGTCTGAGCAGTGCTaGCGGACCCCATTAACAGCAACTCCAATCCTGGTTGTCTGCAAA +
Preference number: 6 (lower is better)
Translates to: IRTLAKDTTSLSEQC*RTPLTATPILVVCK
Trigger: TTTGCAGACAACCAGGATTGGAGTTGCTGTTAATGGGGTCCGCAAGCACTGCTCAGACAAGGAGGTGGTGTCCTTGGCCAAAGTCCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492271.1
ENST00000634793.1
CDS CCA 72 bp GGTCCTGACCAGGCTTCTCTGACTATTGTGTGGTCTTaGTACAGAGAGCAGGAGGATACAGACAGACATGTG +
Preference number: 6 (lower is better)
Translates to: GPDQASLTIVWS*YREQEDTDRHV
Trigger: CACATGTCTGTCTGTATCCTCCTGCTCTCTGTACCAAGACCACACAATAGTCAGAGAAGCCTGGTCAGGACC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461794.1
ENST00000635356.1
CDS CAA 72 bp GCTGTGGTTTCCTTTACCTTTCCACCGATGGTCTTTTaGGAGAGGAGGAGGCAGAAGACTTGGAGTCCACAG +
Preference number: 6 (lower is better)
Translates to: AVVSFTFPPMVF*ERRRQKTWSPQ
Trigger: CTGTGGACTCCAAGTCTTCTGCCTCCTCCTCTCCAAAAAGACCATCGGTGGAAAGGTAAAGGAAACCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374602.2
ENST00000635366.1
CDS TCA 72 bp TGCGCACGCGGTTCCGGTACTTCATGTCCGTGCTCTTaGGCTCTTGGTAGATATGATCTTCGATTTCTGATG +
Preference number: 6 (lower is better)
Translates to: CARGSGTSCPCS*ALGRYDLRFLM
Trigger: CATCAGAAATCGAAGATCATATCTACCAAGAGCTCAAGAGCACGGACATGAAGTACCGGAACCGCGTGCGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450454.7
ENST00000476978.2
ENST00000635035.2
ENST00000635497.2
CDS CAA 72 bp TTTTTGATAAGGACTTTGGCCAAGGACACCACCTCCTaGTCTGAGCAGTGCTTGCGGACCCCATTAACAGCA +
Preference number: 6 (lower is better)
Translates to: FLIRTLAKDTTS*SEQCLRTPLTA
Trigger: TGCTGTTAATGGGGTCCGCAAGCACTGCTCAGACAAGGAGGTGGTGTCCTTGGCCAAAGTCCTTATCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374601.7
ENST00000374602.2
ENST00000450454.7
ENST00000461794.1
ENST00000476978.2
ENST00000492271.1
ENST00000634793.1
ENST00000634832.1
ENST00000635035.2
ENST00000635356.1
ENST00000635366.1
ENST00000635497.2
CDS TCA 72 bp TATGATCTTCGATTTCTGATGCCATCTTGTCACAGTTaGCTCCATAGTCCTTGTAATCATCGTCCGCCTTCA +
Preference number: 6 (lower is better)
Translates to: YDLRFLMPSCHS*LHSPCNHRPPS
Trigger: TGAAGGCGGACGATGATTACAAGGACTATGGAGTCAACTGTGACAAGATGGCATCAGAAATCGAAGATCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450454.7
ENST00000476978.2
ENST00000635035.2
ENST00000635497.2
CDS TCA 72 bp GCTCTTGAGCTCTTGGTAGATATGATCTTCGATTTCTaGTGCCATCTTGTCACAGTTGACTCCATAGTCCTT +
Preference number: 6 (lower is better)
Translates to: ALELLVDMIFDF*CHLVTVDSIVL
Trigger: AAGGACTATGGAGTCAACTGTGACAAGATGGCATCAGAAATCGAAGATCATATCTACCAAGAGCTCAAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450454.7
ENST00000476978.2
ENST00000635035.2
ENST00000635497.2