RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TCEA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000171703

Ensembl transcript IDs: ENST00000339217.8, ENST00000343484.10, ENST00000361317.6, ENST00000395053.7, ENST00000415602.5, ENST00000440819.5, ENST00000458442.1, ENST00000461072.5, ENST00000465111.5, ENST00000465433.5, ENST00000470559.5, ENST00000475236.1, ENST00000475792.1, ENST00000476113.1, ENST00000477783.5, ENST00000487164.5

Found 304 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCCGCCTTCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTaGGCCGGGGAGGGCCCAAGGCTGCAGCACATCTACACGAGGGGT +
Preference number: 1 (lower is better)
Translates to: CRLLGSPEKLCQRRT*AGEGPRLQHIYTRG
Trigger: ACCCCTCGTGTAGATGTGCTGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGAAGGCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395053.7
3UTR GCA 90 bp AGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTaGAGCACATCTACACGAGGGGTCAGCAGAACTTCCAGCGGTTTC +
Preference number: 1 (lower is better)
Translates to: RSCVNGGRGPGRAQG*STSTRGVSRTSSGF
Trigger: GAAACCGCTGGAAGTTCTGCTGACCCCTCGTGTAGATGTGCTGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395053.7
3UTR GCA 90 bp AGGGCAGAAAGGTGCAATCCAGGCAGGCAGGTTGAGGGCAGGACATaGCGCCTTCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACG +
Preference number: 1 (lower is better)
Translates to: RAERCNPGRQVEGRT*RLLGSPEKLCQRRT
Trigger: CGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGAAGGCGGCATGTCCTGCCCTCAACCTGCCTGCCTGGATTGCACCTTTCTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
3UTR GCA 90 bp GTTCTTATACTTCATGTCTGTGTTTCCAACGTCCCGGAAGATGCGTaGAAGTGTTTTAAGGACCCACCTGAGGACAACGTCGCTGCCCTC +
Preference number: 1 (lower is better)
Translates to: VLILHVCVSNVPEDA*KCFKDPPEDNVAAL
Trigger: GAGGGCAGCGACGTTGTCCTCAGGTGGGTCCTTAAAACACTTGCACGCATCTTCCGGGACGTTGGAAACACAGACATGAAGTATAAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395053.7
3UTR-3UTR GCA 90 bp TTAAGGACCCACCTGAGGACAACGTCGCTGCCCTCCACCTACCACCTGCCCCGCGGGAGGGCCCAAGGCTaGAGCACATCTACACGAGGG +
Preference number: 2 (lower is better)
Translates to: LRTHLRTTSLPSTYHLPRGRAQG*STSTRG
Trigger: CCCTCGTGTAGATGTGCTGCAGCCTTGGGCCCTCCC...GCGGGGCAGGTGGTAGGTGGAGGGCAGCGACGTTGTCCTCAGGTGGGTCCTTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395053.7
3UTR-3UTR GCA 90 bp CAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAGCGTTGAGGGCAGGACATaGCGCCTTCTAGGGTCTCCA +
Preference number: 2 (lower is better)
Translates to: QRSCVNGGRGPGRAQGCSVEGRT*RLLGSP
Trigger: TGGAGACCCTAGAAGGCGGCATGTCCTGCCCTCAAC...GCTGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
3UTR-3UTR CCA 90 bp CCGCCGCAGGTCAGGGTTCTTGGCATCCTTCAGGTTGGAGATACGACTCCGTACTGTCAACGGAGGACGTaGGCCGGGGAGGGCCCAAGG +
Preference number: 2 (lower is better)
Translates to: PPQVRVLGILQVGDTTPYCQRRT*AGEGPR
Trigger: CCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACA...GTACGGAGTCGTATCTCCAACCTGAAGGATGCCAAGAACCCTGACCTGCGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395053.7
3UTR-3UTR CCA 90 bp CAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAGCTGGCATCCTTCAGGTTaGAGATACGACTCCGTACAC +
Preference number: 2 (lower is better)
Translates to: QRSCVNGGRGPGRAQGCSWHPSG*RYDSVH
Trigger: GTGTACGGAGTCGTATCTCCAACCTGAAGGATGCCA...GCTGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395053.7
3UTR-3UTR GCA 90 bp GGCCCAAGGCTGCAGCACATCTACACGAGGGGTCAGCAGAACTTCCAGCGGTTTGTCATCACAGCGATCTaGTGGGGTGTTATGGCCCCA +
Preference number: 2 (lower is better)
Translates to: GPRLQHIYTRGQQNFQRFVITAI*WGVMAP
Trigger: TGGGGCCATAACACCCCAGCAGATCGCTGTGATGAC...AAACCGCTGGAAGTTCTGCTGACCCCTCGTGTAGATGTGCTGCAGCCTTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395053.7
3UTR-3UTR CCA 90 bp AAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGCAGGTGTCAACGGAGGACGTaGGCCGGGGAGGGCCCAAGG +
Preference number: 2 (lower is better)
Translates to: KHLIMRGKGQKGAIQAGRCQRRT*AGEGPR
Trigger: CCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACA...CCTGCCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
3UTR-3UTR GCA 90 bp CAGGTTGGAGATACGACTCCGTACACGGTTCTTATACTTCATGTCTGTGTTTCCGGAGAGGTGAAGGGCTaGAGGGCCAAGCCTGCCCCA +
Preference number: 2 (lower is better)
Translates to: QVGDTTPYTVLILHVCVSGEVKG*RAKPAP
Trigger: TGGGGCAGGCTTGGCCCTGCAGCCCTTCACCTCTCC...GGAAACACAGACATGAAGTATAAGAACCGTGTACGGAGTCGTATCTCCAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395053.7
3UTR-3UTR TCA 90 bp CAGGTTGGAGATACGACTCCGTACACGGTTCTTATACTTCATGTCTGTGTTTCCCCCCAGGCCCATTCCTaGCTGAGACCCAGCTTCAGG +
Preference number: 2 (lower is better)
Translates to: QVGDTTPYTVLILHVCVSPQAHS*LRPSFR
Trigger: CCTGAAGCTGGGTCTCAGTCAGGAATGGGCCTGGGG...GGAAACACAGACATGAAGTATAAGAACCGTGTACGGAGTCGTATCTCCAACCTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000395053.7
3UTR-3UTR GCA 90 bp GGTTGGAGATACGACTCCGTACACGGTTCTTATACTTCATGTCTGTGTTTCCAAACACAGGGGTCGGTCTaGCCACCCACACCTGGTGGA +
Preference number: 2 (lower is better)
Translates to: GWRYDSVHGSYTSCLCFQTQGSV*PPTPGG
Trigger: TCCACCAGGTGTGGGTGGGCAGACCGACCCCTGTGT...TTGGAAACACAGACATGAAGTATAAGAACCGTGTACGGAGTCGTATCTCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395053.7
3UTR-3UTR GCA 90 bp CAGGTTGGAGATACGACTCCGTACACGGTTCTTATACTTCATGTCTGTGTTTCCGTTGAGGGCAGGACATaGCGCCTTCTAGGGTCTCCA +
Preference number: 2 (lower is better)
Translates to: QVGDTTPYTVLILHVCVSVEGRT*RLLGSP
Trigger: TGGAGACCCTAGAAGGCGGCATGTCCTGCCCTCAAC...GGAAACACAGACATGAAGTATAAGAACCGTGTACGGAGTCGTATCTCCAACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395053.7
3UTR-3UTR CAA 90 bp CTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCATCCAGGCAGGCAGGTaGAGGGCAGGACATGCCGCC +
Preference number: 3 (lower is better)
Translates to: LQRSCVNGGRGPGRAQGCIQAGR*RAGHAA
Trigger: GGCGGCATGTCCTGCCCTCAACCTGCCTGCCTGGAT...GCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
3UTR CCA 72 bp GCTCATCACTGGCCATCTCCTGGAGCACGGGGCCAGTaGCTTAGCCCACCGCTCCGAGGGAGCAGCCCTCCA +
Preference number: 3 (lower is better)
Translates to: AHHWPSPGARGQ*LSPPLRGSSPP
Trigger: TGGAGGGCTGCTCCCTCGGAGCGGTGGGCTAAGCCACTGGCCCCGTGCTCCAGGAGATGGCCAGTGATGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395053.7
3UTR-3UTR CAA 90 bp TCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAATCCAGGCAGGCAGGTaGAGGGCAGGACATGCCGCC +
Preference number: 3 (lower is better)
Translates to: SREAVSTEDVGRGGPKAAIQAGR*RAGHAA
Trigger: GGCGGCATGTCCTGCCCTCAACCTGCCTGCCTGGAT...TGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
3UTR GCA 72 bp CTGGAAAGGTTCTGCCCAGCCACACAGGGGTCGGTCTaGCCACCCACACCTGGTGGAGAGGTGAAGGGCTGC +
Preference number: 3 (lower is better)
Translates to: LERFCPATQGSV*PPTPGGEVKGC
Trigger: GCAGCCCTTCACCTCTCCACCAGGTGTGGGTGGGCAGACCGACCCCTGTGTGGCTGGGCAGAACCTTTCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395053.7
3UTR GCA 72 bp GTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTaGAGCACATCTACACGAGGGGTCAGCAGAACTTCC +
Preference number: 3 (lower is better)
Translates to: VNGGRGPGRAQG*STSTRGVSRTS
Trigger: GGAAGTTCTGCTGACCCCTCGTGTAGATGTGCTGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395053.7
3UTR CCA 72 bp CTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTaGGCCGGGGAGGGCCCAAGGCTGCAGCACATCTAC +
Preference number: 3 (lower is better)
Translates to: LGSPEKLCQRRT*AGEGPRLQHIY
Trigger: GTAGATGTGCTGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
3UTR CCA 72 bp CAGGGGCTCACCTCTGAGGTCATCACAGCGATCTGCTaGGGTGTTATGGCCCCACACAGCACATTCCGCCGC +
Preference number: 3 (lower is better)
Translates to: QGLTSEVITAIC*GVMAPHSTFRR
Trigger: GCGGCGGAATGTGCTGTGTGGGGCCATAACACCCCAGCAGATCGCTGTGATGACCTCAGAGGTGAGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395053.7
3UTR TCA 72 bp GGAAAGGGCAGAAAGGTGCAATCCAGGCAGGCAGGTTaGGGGCAGGACATGCCGCCTTCTAGGGTCTCCAGA +
Preference number: 3 (lower is better)
Translates to: GKGRKVQSRQAG*GQDMPPSRVSR
Trigger: TCTGGAGACCCTAGAAGGCGGCATGTCCTGCCCTCAACCTGCCTGCCTGGATTGCACCTTTCTGCCCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
3UTR GCA 72 bp GAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTaGAATCCAGGCAGGCAGGTTGAGGGCAGGACATGC +
Preference number: 3 (lower is better)
Translates to: ETFNNEGERAER*NPGRQVEGRTC
Trigger: GCATGTCCTGCCCTCAACCTGCCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp CTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCCCTCGGAGTCGACGGTaGCCTGGGCAGCTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: LQRSCVNGGRGPGRAQGCPRSRR*PGQLRP
Trigger: AGGCCGGAGCTGCCCAGGGCACCGTCGACTCCGAGG...GCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp CTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCCTCGCCGCAGGGTGCTaGTCCAGCCCCTACTCCCGC +
Preference number: 4 (lower is better)
Translates to: LQRSCVNGGRGPGRAQGCLAAGC*SSPYSR
Trigger: GCGGGAGTAGGGGCTGGAGCAGCACCCTGCGGCGAG...GCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS-3UTR GCA 90 bp CAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAGCGGCCTCGCCGCAGGGTaGTGCTCCAGCCCCTACTCC +
Preference number: 4 (lower is better)
Translates to: QRSCVNGGRGPGRAQGCSGLAAG*CSSPYS
Trigger: GGAGTAGGGGCTGGAGCAGCACCCTGCGGCGAGGCC...GCTGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS-3UTR TCA 90 bp CTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCGGGATCCGGGGCCTCTaGGGCATCCCTCGAGGACGT +
Preference number: 4 (lower is better)
Translates to: LQRSCVNGGRGPGRAQGCGIRGL*GIPRGR
Trigger: ACGTCCTCGAGGGATGCCTCAGAGGCCCCGGATCCC...GCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp TCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAACGTGGGCAGAGGCATaGCCCTCCCCCGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SREAVSTEDVGRGGPKAATWAEA*PSPAPW
Trigger: CCAGGGAGCGGGGGAGGGGCATGCCTCTGCCCACGT...TGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp GTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTCCGGCCTCTTGCGGCTaGGATCCGGGGCCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: VSREAVSTEDVGRGGPKAPASCG*DPGPLR
Trigger: CCTCAGAGGCCCCGGATCCCAGCCGCAAGAGGCCGG...AGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp GGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGTGTCAACGGAGGACGTaGGCCGGGGAGGGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: GSPEKLCQRRTWAGEGPRCQRRT*AGEGPR
Trigger: CCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACA...CCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp GGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGGGAGCACGGGGCCAGTaGCTTAGCCCACCGCTCCGA +
Preference number: 4 (lower is better)
Translates to: GSPEKLCQRRTWAGEGPRGARGQ*LSPPLR
Trigger: TCGGAGCGGTGGGCTAAGCCACTGGCCCCGTGCTCC...CCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR TCA 90 bp GTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGGGATCCGGGGCCTCTaGGGCATCCCTCGAGGACGT +
Preference number: 4 (lower is better)
Translates to: VSREAVSTEDVGRGGPKAGIRGL*GIPRGR
Trigger: ACGTCCTCGAGGGATGCCTCAGAGGCCCCGGATCCC...AGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR TCA 90 bp TCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAGACCACCCAGGCAGGTaGCCACCCAGGCAGGTGACC +
Preference number: 4 (lower is better)
Translates to: SREAVSTEDVGRGGPKAADHPGR*PPRQVT
Trigger: GGTCACCTGCCTGGGTGGTCACCTGCCTGGGTGGTC...TGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR CCA 90 bp CGCCTTCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGCCGGCCTCTTGCGGCTaGGATCCGGGGCCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RLLGSPEKLCQRRTWAGEPASCG*DPGPLR
Trigger: CCTCAGAGGCCCCGGATCCCAGCCGCAAGAGGCCGG...CTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGAAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp TCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGGAGTCGACGGTGCCCTaGGCAGCTCCGGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SPEKLCQRRTWAGEGPRLESTVP*AAPASC
Trigger: GCAAGAGGCCGGAGCTGCCCAGGGCACCGTCGACTC...CAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp CAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAGCCCATCGATTCTCCTGTaGGGCCTCGCCGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: QRSCVNGGRGPGRAQGCSPSILL*GLAAGC
Trigger: GCACCCTGCGGCGAGGCCCCACAGGAGAATCGATGG...GCTGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS-3UTR GCA 90 bp CCAGGCAGGCAGGTTGAGGGCAGGACATGCCGCCTTCTAGGGTCTCCAGAGAAGCCTCGGAGTCGACGGTaGCCTGGGCAGCTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: PGRQVEGRTCRLLGSPEKPRSRR*PGQLRP
Trigger: AGGCCGGAGCTGCCCAGGGCACCGTCGACTCCGAGG...CTTCTCTGGAGACCCTAGAAGGCGGCATGTCCTGCCCTCAACCTGCCTGCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp CTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCACAGGTCTGTCTGCGTaGCGCCAGTGCGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: LQRSCVNGGRGPGRAQGCTGLSA*RQCGPS
Trigger: AGATGGCCCGCACTGGCGGCACGCAGACAGACCTGT...GCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp GGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGACAGGTCTGTCTGCGTaGCGCCAGTGCGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: GSPEKLCQRRTWAGEGPRTGLSA*RQCGPS
Trigger: AGATGGCCCGCACTGGCGGCACGCAGACAGACCTGT...CCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp TCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAGTGAACAGGTCTGTCTaGGTGCCGCCAGTGCGGGCC +
Preference number: 4 (lower is better)
Translates to: SREAVSTEDVGRGGPKAAVNRSV*VPPVRA
Trigger: GGCCCGCACTGGCGGCACGCAGACAGACCTGTTCAC...TGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp GTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGTGAACAGGTCTGTCTaGGTGCCGCCAGTGCGGGCC +
Preference number: 4 (lower is better)
Translates to: VSREAVSTEDVGRGGPKAVNRSV*VPPVRA
Trigger: GGCCCGCACTGGCGGCACGCAGACAGACCTGTTCAC...AGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp CAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAGCACATCCCGACTCGGGTaGACTGGAGCAGGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: QRSCVNGGRGPGRAQGCSTSRLG*TGAGAA
Trigger: CGCTGCACCTGCTCCAGTCCACCCGAGTCGGGATGT...GCTGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp GGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGACATCCCGACTCGGGTaGACTGGAGCAGGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: GSPEKLCQRRTWAGEGPRTSRLG*TGAGAA
Trigger: CGCTGCACCTGCTCCAGTCCACCCGAGTCGGGATGT...CCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp CTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCCCCTCCCCCGCTCCCTaGCTTTGGCATCGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: LQRSCVNGGRGPGRAQGCPSPAP*LWHRKH
Trigger: ATGCTTCCGATGCCAAAGCCAGGGAGCGGGGGAGGG...GCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp TCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCACATCCCTCGAGGACGTaGGCAGAGGCATGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SREAVSTEDVGRGGPKAAHPSRT*AEACPS
Trigger: GGAGGGGCATGCCTCTGCCCACGTCCTCGAGGGATG...TGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp TTAAGGACCCACCTGAGGACAACGTCGCTGCCCTCCACCTACCACCTGCCCCGCGAGTCGACGGTGCCCTaGGCAGCTCCGGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LRTHLRTTSLPSTYHLPRESTVP*AAPASC
Trigger: GCAAGAGGCCGGAGCTGCCCAGGGCACCGTCGACTC...GCGGGGCAGGTGGTAGGTGGAGGGCAGCGACGTTGTCCTCAGGTGGGTCCTTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR CCA 90 bp CTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCATGGCCACGTGGTCATaGTCCGTCTGCAGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LQRSCVNGGRGPGRAQGCMATWS*SVCRAA
Trigger: CGCTGCCCTGCAGACGGACCATGACCACGTGGCCAT...GCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp GGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGGCACCGATGGCCACGTaGTCATGGTCCGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GSPEKLCQRRTWAGEGPRAPMAT*SWSVCR
Trigger: CCTGCAGACGGACCATGACCACGTGGCCATCGGTGC...CCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp TCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCACGCAGTCCGCACCGATaGCCACGTGGTCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: SREAVSTEDVGRGGPKAARSPHR*PRGHGP
Trigger: CGGACCATGACCACGTGGCCATCGGTGCGGACTGCG...TGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp TCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCGCAGTCCGCACCGATaGCCACGTGGTCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: SPEKLCQRRTWAGEGPRLRSPHR*PRGHGP
Trigger: CGGACCATGACCACGTGGCCATCGGTGCGGACTGCG...CAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp GGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGAATCAGCCCTTCAGCTaGTCCGGGGGCCCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: GSPEKLCQRRTWAGEGPRNQPFS*SGGPPE
Trigger: CTCAGGAGGGCCCCCGGACCAGCTGAAGGGCTGATT...CCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR CCA 90 bp TCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCGCTGGGGGCCATGTTaGGGTGGGGGCTGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: SPEKLCQRRTWAGEGPRLRWGPC*GGGWKG
Trigger: ACCTTTCCAGCCCCCACCCCAACATGGCCCCCAGCG...CAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR TCA 90 bp TCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAGCTTCCGAAGGGCGTTaGCAGACATCCCGACTCGGG +
Preference number: 4 (lower is better)
Translates to: SREAVSTEDVGRGGPKAAASEGR*QTSRLG
Trigger: CCCGAGTCGGGATGTCTGTCAACGCCCTTCGGAAGC...TGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR TCA 90 bp CCAGGCAGGCAGGTTGAGGGCAGGACATGCCGCCTTCTAGGGTCTCCAGAGAAGGGGATCCGGGGCCTCTaGGGCATCCCTCGAGGACGT +
Preference number: 4 (lower is better)
Translates to: PGRQVEGRTCRLLGSPEKGIRGL*GIPRGR
Trigger: ACGTCCTCGAGGGATGCCTCAGAGGCCCCGGATCCC...CTTCTCTGGAGACCCTAGAAGGCGGCATGTCCTGCCCTCAACCTGCCTGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR TCA 90 bp CTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCGCACGGCATCACAGGTaGCAGGCACCGGAGGAAATG +
Preference number: 4 (lower is better)
Translates to: LQRSCVNGGRGPGRAQGCARHHR*QAPEEM
Trigger: CATTTCCTCCGGTGCCTGTCACCTGTGATGCCGTGC...GCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR TCA 90 bp CAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAGCTGCACTTGCCGCAGGTaGACAGGTCTGTCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: QRSCVNGGRGPGRAQGCSCTCRR*TGLSAC
Trigger: GCACGCAGACAGACCTGTTCACCTGCGGCAAGTGCA...GCTGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp CAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAGCGTGGACTGGAGCAGGTaGAGCGTGATAGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: QRSCVNGGRGPGRAQGCSVDWSR*SVIGMA
Trigger: GGCCATGCCTATCACGCTGCACCTGCTCCAGTCCAC...GCTGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp GACATGCCGCCTTCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCCTCGGAGTCGACGGTaGCCTGGGCAGCTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: DMPPSRVSREAVSTEDVGPRSRR*PGQLRP
Trigger: AGGCCGGAGCTGCCCAGGGCACCGTCGACTCCGAGG...GCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGAAGGCGGCATGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp TCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCGGGAGGGCCCAAGGCTaGAGCACATCTACACGAGGG +
Preference number: 4 (lower is better)
Translates to: SRVSREAVSTEDVGRGGPGRAQG*STSTRG
Trigger: CCCTCGTGTAGATGTGCTGCAGCCTTGGGCCCTCCC...GGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp TCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCACACACGGGGAGCCACTaGGGACTGGTTGGCGAGTGT +
Preference number: 4 (lower is better)
Translates to: SREAVSTEDVGRGGPKAAHTGSH*GLVGEC
Trigger: ACACTCGCCAACCAGTCCGCAGTGGCTCCCCGTGTG...TGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS-3UTR CCA 90 bp CCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAGCCCGCAGCAAATCCATaGCTCCCTCCGCGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PEKLCQRRTWAGEGPRLQPAANP*LPPRSS
Trigger: AGAAGAGCGCGGAGGGAGCCATGGATTTGCTGCGGG...CTGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343484.10
ENST00000395053.7
CDS-3UTR CCA 90 bp CGCCTTCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGCATCCCTCGAGGACGTaGGCAGAGGCATGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RLLGSPEKLCQRRTWAGEHPSRT*AEACPS
Trigger: GGAGGGGCATGCCTCTGCCCACGTCCTCGAGGGATG...CTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGAAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp GTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTATGGCCACGTGGTCATaGTCCGTCTGCAGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: VSREAVSTEDVGRGGPKAMATWS*SVCRAA
Trigger: CGCTGCCCTGCAGACGGACCATGACCACGTGGCCAT...AGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp TCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGGCACCGATGGCCACGTaGTCATGGTCCGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SPEKLCQRRTWAGEGPRLAPMAT*SWSVCR
Trigger: CCTGCAGACGGACCATGACCACGTGGCCATCGGTGC...CAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp TCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAGCACCGATGGCCACGTaGTCATGGTCCGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SREAVSTEDVGRGGPKAAAPMAT*SWSVCR
Trigger: CCTGCAGACGGACCATGACCACGTGGCCATCGGTGC...TGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp TCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGTCACTGGCCATCTCCTaGAGCACGGGGCCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SPEKLCQRRTWAGEGPRLSLAIS*STGPVA
Trigger: AGCCACTGGCCCCGTGCTCCAGGAGATGGCCAGTGA...CAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR TCA 90 bp TCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGGCACGGCATCACAGGTaGCAGGCACCGGAGGAAATG +
Preference number: 4 (lower is better)
Translates to: SPEKLCQRRTWAGEGPRLARHHR*QAPEEM
Trigger: CATTTCCTCCGGTGCCTGTCACCTGTGATGCCGTGC...CAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR TCA 90 bp GTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTATGCATTCCTCGATCTaGGCCGACAGGCGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: VSREAVSTEDVGRGGPKAMHSSI*ADRRSQ
Trigger: CTGCGAGCGCCTGTCGGCTCAGATCGAGGAATGCAT...AGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343484.10
ENST00000361317.6
CDS-3UTR TCA 90 bp TCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAATGCATTCCTCGATCTaGGCCGACAGGCGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: SREAVSTEDVGRGGPKAAMHSSI*ADRRSQ
Trigger: CTGCGAGCGCCTGTCGGCTCAGATCGAGGAATGCAT...TGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343484.10
ENST00000361317.6
CDS-3UTR TCA 90 bp TCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCATGCACTTGCCGCAGGTaGACAGGTCTGTCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: SREAVSTEDVGRGGPKAACTCRR*TGLSAC
Trigger: GCACGCAGACAGACCTGTTCACCTGCGGCAAGTGCA...TGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp TCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCGTGGACTGGAGCAGGTaGAGCGTGATAGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: SRVSREAVSTEDVGRGGPVDWSR*SVIGMA
Trigger: GGCCATGCCTATCACGCTGCACCTGCTCCAGTCCAC...GGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp CCGCCGCAGGTCAGGGTTCTTGGCATCCTTCAGGTTGGAGATACGACTCCGTACACGTGGGCAGAGGCATaGCCCTCCCCCGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PPQVRVLGILQVGDTTPYTWAEA*PSPAPW
Trigger: CCAGGGAGCGGGGGAGGGGCATGCCTCTGCCCACGT...GTACGGAGTCGTATCTCCAACCTGAAGGATGCCAAGAACCCTGACCTGCGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR GCA 90 bp CAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAGCTGGGCTCATCAGAGCTaGGGGTCTGCACCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: QRSCVNGGRGPGRAQGCSWAHQS*GSAPVC
Trigger: ACACACAGGTGCAGACCCGCAGCTCTGATGAGCCCA...GCTGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp CTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCCGGGCCCTCAGAATTTaGACCCAGAGGCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: LQRSCVNGGRGPGRAQGCRALRI*TQRLTA
Trigger: TGCTGTCAGCCTCTGGGTGCAAATTCTGAGGGCCCG...GCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS-3UTR GCA 90 bp CCAGGCAGGCAGGTTGAGGGCAGGACATGCCGCCTTCTAGGGTCTCCAGAGAAGGCTTCCCCAGCAAGCTaGTCAGGGCCGCCAGACGCT +
Preference number: 4 (lower is better)
Translates to: PGRQVEGRTCRLLGSPEKASPAS*SGPPDA
Trigger: AGCGTCTGGCGGCCCTGAGCAGCTTGCTGGGGAAGC...CTTCTCTGGAGACCCTAGAAGGCGGCATGTCCTGCCCTCAACCTGCCTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS-3UTR CCA 90 bp TCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCCGACTCGGGTGGACTaGAGCAGGTGCAGCGTGATA +
Preference number: 4 (lower is better)
Translates to: SPEKLCQRRTWAGEGPRLPTRVD*SRCSVI
Trigger: TATCACGCTGCACCTGCTCCAGTCCACCCGAGTCGG...CAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp TCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCCCGCTCCCTGGCTTTaGCATCGGAAGCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: SPEKLCQRRTWAGEGPRLPAPWL*HRKHPG
Trigger: TCCTGGATGCTTCCGATGCCAAAGCCAGGGAGCGGG...CAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp CGCCTTCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGATGGCCACGTGGTCATaGTCCGTCTGCAGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: RLLGSPEKLCQRRTWAGEMATWS*SVCRAA
Trigger: CGCTGCCCTGCAGACGGACCATGACCACGTGGCCAT...CTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGAAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp CCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAGTCTGGTGCTCTCGGATaGCCTCCTTGGTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: PEKLCQRRTWAGEGPRLQSGALG*PPWSWP
Trigger: AGGCCATGACCAAGGAGGCCATCCGAGAGCACCAGA...CTGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp TCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCGGAGCCACTGCGGACTaGTTGGCGAGTGTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SRVSREAVSTEDVGRGGPGATAD*LASVCL
Trigger: GAGACAGACACTCGCCAACCAGTCCGCAGTGGCTCC...GGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS-3UTR CCA 90 bp TTAAGGACCCACCTGAGGACAACGTCGCTGCCCTCCACCTACCACCTGCCCCGCCTGCCCACCCACACCTaGTGGAGAGGTGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LRTHLRTTSLPSTYHLPRLPTHT*WRGEGL
Trigger: CAGCCCTTCACCTCTCCACCAGGTGTGGGTGGGCAG...GCGGGGCAGGTGGTAGGTGGAGGGCAGCGACGTTGTCCTCAGGTGGGTCCTTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR CCA 90 bp TCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCTGTTGGGGTGGGGGCTaGAAAGGTTCTGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SRVSREAVSTEDVGRGGPCWGGG*KGSAQP
Trigger: TGGCTGGGCAGAACCTTTCCAGCCCCCACCCCAACA...GGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR TCA 90 bp CGCCTTCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGCCGGAGGAAATGTGGTaGTCCTCGGAGTCGACGGTG +
Preference number: 4 (lower is better)
Translates to: RLLGSPEKLCQRRTWAGEPEEMW*SSESTV
Trigger: CACCGTCGACTCCGAGGATCACCACATTTCCTCCGG...CTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGAAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp GGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGGTCATCACAGCGATCTaGTGGGGTGTTATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GSPEKLCQRRTWAGEGPRVITAI*WGVMAP
Trigger: TGGGGCCATAACACCCCAGCAGATCGCTGTGATGAC...CCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp CAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAGCGTCATCACAGCGATCTaGTGGGGTGTTATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: QRSCVNGGRGPGRAQGCSVITAI*WGVMAP
Trigger: TGGGGCCATAACACCCCAGCAGATCGCTGTGATGAC...GCTGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp TCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCGTTGAGGGCAGGACATaGCGCCTTCTAGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SRVSREAVSTEDVGRGGPVEGRT*RLLGSP
Trigger: TGGAGACCCTAGAAGGCGGCATGTCCTGCCCTCAAC...GGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp CGCCTTCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGCCGACTCGGGTGGACTaGAGCAGGTGCAGCGTGATA +
Preference number: 4 (lower is better)
Translates to: RLLGSPEKLCQRRTWAGEPTRVD*SRCSVI
Trigger: TATCACGCTGCACCTGCTCCAGTCCACCCGAGTCGG...CTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGAAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp CCAGGCAGGCAGGTTGAGGGCAGGACATGCCGCCTTCTAGGGTCTCCAGAGAAGCCCTCCCCCGCTCCCTaGCTTTGGCATCGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: PGRQVEGRTCRLLGSPEKPSPAP*LWHRKH
Trigger: ATGCTTCCGATGCCAAAGCCAGGGAGCGGGGGAGGG...CTTCTCTGGAGACCCTAGAAGGCGGCATGTCCTGCCCTCAACCTGCCTGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp CGCAGGTCAGGGTTCTTGGCATCCTTCAGGTTGGAGATACGACTCCGTACACGGCCGGCCTCTTGCGGCTaGGATCCGGGGCCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RRSGFLASFRLEIRLRTRPASCG*DPGPLR
Trigger: CCTCAGAGGCCCCGGATCCCAGCCGCAAGAGGCCGG...CCGTGTACGGAGTCGTATCTCCAACCTGAAGGATGCCAAGAACCCTGACCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR CCA 90 bp CCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAGTCTGCTGGGGTGTTATaGCCCCACACAGCACATTCC +
Preference number: 4 (lower is better)
Translates to: PEKLCQRRTWAGEGPRLQSAGVL*PHTAHS
Trigger: GGAATGTGCTGTGTGGGGCCATAACACCCCAGCAGA...CTGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp TCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCTCTGGTGCTCTCGGATaGCCTCCTTGGTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: SRVSREAVSTEDVGRGGPSGALG*PPWSWP
Trigger: AGGCCATGACCAAGGAGGCCATCCGAGAGCACCAGA...GGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp CAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAGCCAACAAAGGTGGTCATaGGCTCATCAGAGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: QRSCVNGGRGPGRAQGCSQQRWS*AHQSCG
Trigger: CCCGCAGCTCTGATGAGCCCATGACCACCTTTGTTG...GCTGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp GGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCAACAAAGGTGGTCATaGGCTCATCAGAGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: GSPEKLCQRRTWAGEGPRQQRWS*AHQSCG
Trigger: CCCGCAGCTCTGATGAGCCCATGACCACCTTTGTTG...CCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp TCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCCCTTCAGCTCATCACTaGCCATCTCCTGGAGCACGG +
Preference number: 4 (lower is better)
Translates to: SRVSREAVSTEDVGRGGPPSAHH*PSPGAR
Trigger: CCGTGCTCCAGGAGATGGCCAGTGATGAGCTGAAGG...GGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR TCA 90 bp TCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAACTTGGCCAGTGCAATaGCCTCCTCATCCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SREAVSTEDVGRGGPKAATWPVQ*PPHPSS
Trigger: AGAGCTCGGATGAGGAGGTCATTGCACTGGCCAAGT...TGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR TCA 90 bp TCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCACTGGCCATCTCCTCTaGGGTCATCACAGCGATCTG +
Preference number: 4 (lower is better)
Translates to: SRVSREAVSTEDVGRGGPTGHLL*GHHSDL
Trigger: CAGATCGCTGTGATGACCTCAGAGGAGATGGCCAGT...GGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343484.10
ENST00000361317.6
CDS-3UTR TCA 90 bp TCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAACTGGCCATCTCCTCTaGGGTCATCACAGCGATCTG +
Preference number: 4 (lower is better)
Translates to: SREAVSTEDVGRGGPKAATGHLL*GHHSDL
Trigger: CAGATCGCTGTGATGACCTCAGAGGAGATGGCCAGT...TGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343484.10
ENST00000361317.6
CDS-3UTR GCA 90 bp GTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTCAACGTCCCGGAAGATaGATTCCTCGATCTGAGCCG +
Preference number: 4 (lower is better)
Translates to: VSREAVSTEDVGRGGPKAQRPGR*IPRSEP
Trigger: CGGCTCAGATCGAGGAATGCATCTTCCGGGACGTTG...AGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343484.10
ENST00000361317.6
CDS-3UTR GCA 90 bp GTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGTCATCACAGCGATCTaGTGGGGTGTTATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: VSREAVSTEDVGRGGPKAVITAI*WGVMAP
Trigger: TGGGGCCATAACACCCCAGCAGATCGCTGTGATGAC...AGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp GGCCCAAGGCTGCAGCACATCTACACGAGGGGTCAGCAGAACTTCCAGCGGTTTGTGAACAGGTCTGTCTaGGTGCCGCCAGTGCGGGCC +
Preference number: 4 (lower is better)
Translates to: GPRLQHIYTRGQQNFQRFVNRSV*VPPVRA
Trigger: GGCCCGCACTGGCGGCACGCAGACAGACCTGTTCAC...AAACCGCTGGAAGTTCTGCTGACCCCTCGTGTAGATGTGCTGCAGCCTTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR GCA 90 bp CCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAGGAAAGGGCAGAAAGGTaGAATCCAGGCAGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: PEKLCQRRTWAGEGPRLQERAER*NPGRQV
Trigger: AACCTGCCTGCCTGGATTGCACCTTTCTGCCCTTTC...CTGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp GGCCCAAGGCTGCAGCACATCTACACGAGGGGTCAGCAGAACTTCCAGCGGTTTCCTCCACCTACCACCTaGCCCGCTGGGGGCCATGTT +
Preference number: 4 (lower is better)
Translates to: GPRLQHIYTRGQQNFQRFPPPTT*PAGGHV
Trigger: AACATGGCCCCCAGCGGGGCAGGTGGTAGGTGGAGG...AAACCGCTGGAAGTTCTGCTGACCCCTCGTGTAGATGTGCTGCAGCCTTGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR CCA 90 bp CCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAGGCAGGTCAGGGTTCTTaGCATCCTTCAGGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: PEKLCQRRTWAGEGPRLQAGQGS*HPSGWR
Trigger: TCTCCAACCTGAAGGATGCCAAGAACCCTGACCTGC...CTGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp TCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCATCACAGCGATCTGCTaGGGTGTTATGGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: SRVSREAVSTEDVGRGGPITAIC*GVMAPH
Trigger: GTGTGGGGCCATAACACCCCAGCAGATCGCTGTGAT...GGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp TCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCCTCGGATGGCCTCCTTaGTCATGGCCTTACGGATCT +
Preference number: 4 (lower is better)
Translates to: SRVSREAVSTEDVGRGGPLGWPP*SWPYGS
Trigger: AGATCCGTAAGGCCATGACCAAGGAGGCCATCCGAG...GGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp CGCCTTCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGTCTGGTGCTCTCGGATaGCCTCCTTGGTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: RLLGSPEKLCQRRTWAGESGALG*PPWSWP
Trigger: AGGCCATGACCAAGGAGGCCATCCGAGAGCACCAGA...CTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGAAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR TCA 90 bp CCGCCGCAGGTCAGGGTTCTTGGCATCCTTCAGGTTGGAGATACGACTCCGTACGCTTCCGAAGGGCGTTaGCAGACATCCCGACTCGGG +
Preference number: 4 (lower is better)
Translates to: PPQVRVLGILQVGDTTPYASEGR*QTSRLG
Trigger: CCCGAGTCGGGATGTCTGTCAACGCCCTTCGGAAGC...GTACGGAGTCGTATCTCCAACCTGAAGGATGCCAAGAACCCTGACCTGCGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR TCA 90 bp GACATGCCGCCTTCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCCGGAGGAAATGTGGTaGTCCTCGGAGTCGACGGTG +
Preference number: 4 (lower is better)
Translates to: DMPPSRVSREAVSTEDVGPEEMW*SSESTV
Trigger: CACCGTCGACTCCGAGGATCACCACATTTCCTCCGG...GCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGAAGGCGGCATGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR TCA 90 bp GACATGCCGCCTTCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCTGCACTTGCCGCAGGTaGACAGGTCTGTCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: DMPPSRVSREAVSTEDVGCTCRR*TGLSAC
Trigger: GCACGCAGACAGACCTGTTCACCTGCGGCAAGTGCA...GCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGAAGGCGGCATGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR TCA 90 bp TCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCTTTGCACCCAGAGGCTaGCAGCATCAGAACCATCGA +
Preference number: 4 (lower is better)
Translates to: SRVSREAVSTEDVGRGGPFAPRG*QHQNHR
Trigger: TCGATGGTTCTGATGCTGTCAGCCTCTGGGTGCAAA...GGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS-3UTR TCA 90 bp CGCCTTCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGATATATTCCTCGATCTaGGCCGACAGGCGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: RLLGSPEKLCQRRTWAGEIYSSI*ADRRSQ
Trigger: CTGCGAGCGCCTGTCGGCTCAGATCGAGGAATATAT...CTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGAAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR GCA 90 bp TCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAATCTCCTCTTCCTTaGCCATCATCGCCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: SPEKLCQRRTWAGEGPRLQSPLP*PSSPQE
Trigger: CTCCTGAGGCGATGATGGGCAAGGAAGAGGAGATTG...CAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343484.10
ENST00000395053.7
CDS-3UTR GCA 90 bp TCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCGAGAGACTTGGCCAGTaGAATGACCTCCTCATCCGA +
Preference number: 4 (lower is better)
Translates to: SRVSREAVSTEDVGRGGPERLGQ*NDLLIR
Trigger: TCGGATGAGGAGGTCATTGCACTGGCCAAGTCTCTC...GGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp GACATGCCGCCTTCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCCCGCTCCCTGGCTTTaGCATCGGAAGCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: DMPPSRVSREAVSTEDVGPAPWL*HRKHPG
Trigger: TCCTGGATGCTTCCGATGCCAAAGCCAGGGAGCGGG...GCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGAAGGCGGCATGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp CCGCAGGTCAGGGTTCTTGGCATCCTTCAGGTTGGAGATACGACTCCGTACACGCATCCCTCGAGGACGTaGGCAGAGGCATGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PQVRVLGILQVGDTTPYTHPSRT*AEACPS
Trigger: GGAGGGGCATGCCTCTGCCCACGTCCTCGAGGGATG...CGTGTACGGAGTCGTATCTCCAACCTGAAGGATGCCAAGAACCCTGACCTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR CCA 90 bp GGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGTGGCATCCTTCAGGTTaGAGATACGACTCCGTACAC +
Preference number: 4 (lower is better)
Translates to: GSPEKLCQRRTWAGEGPRWHPSG*RYDSVH
Trigger: GTGTACGGAGTCGTATCTCCAACCTGAAGGATGCCA...CCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp CTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCTGGCATCCTTCAGGTTaGAGATACGACTCCGTACAC +
Preference number: 4 (lower is better)
Translates to: LQRSCVNGGRGPGRAQGCWHPSG*RYDSVH
Trigger: GTGTACGGAGTCGTATCTCCAACCTGAAGGATGCCA...GCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp TCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAGCAGGTCAGGGTTCTTaGCATCCTTCAGGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SREAVSTEDVGRGGPKAAAGQGS*HPSGWR
Trigger: TCTCCAACCTGAAGGATGCCAAGAACCCTGACCTGC...TGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR TCA 90 bp CCGCCGCAGGTCAGGGTTCTTGGCATCCTTCAGGTTGGAGATACGACTCCGTACGCACGGCATCACAGGTaGCAGGCACCGGAGGAAATG +
Preference number: 4 (lower is better)
Translates to: PPQVRVLGILQVGDTTPYARHHR*QAPEEM
Trigger: CATTTCCTCCGGTGCCTGTCACCTGTGATGCCGTGC...GTACGGAGTCGTATCTCCAACCTGAAGGATGCCAAGAACCCTGACCTGCGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR TCA 90 bp CGCAGGTCAGGGTTCTTGGCATCCTTCAGGTTGGAGATACGACTCCGTACACGGCCCCAGGCCCATTCCTaGCTGAGACCCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RRSGFLASFRLEIRLRTRPQAHS*LRPSFR
Trigger: CCTGAAGCTGGGTCTCAGTCAGGAATGGGCCTGGGG...CCGTGTACGGAGTCGTATCTCCAACCTGAAGGATGCCAAGAACCCTGACCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR GCA 90 bp GGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGGGTTTCCACACTCGTTaGAGACAACAAAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: GSPEKLCQRRTWAGEGPRGFHTR*RQQRWS
Trigger: TGACCACCTTTGTTGTCTGCAACGAGTGTGGAAACC...CCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp CCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAGGGTTTCCACACTCGTTaGAGACAACAAAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: PEKLCQRRTWAGEGPRLQGFHTR*RQQRWS
Trigger: TGACCACCTTTGTTGTCTGCAACGAGTGTGGAAACC...CTGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp CGCCTTCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGAAAGGGCAGAAAGGTaGAATCCAGGCAGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: RLLGSPEKLCQRRTWAGEERAER*NPGRQV
Trigger: AACCTGCCTGCCTGGATTGCACCTTTCTGCCCTTTC...CTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGAAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp CCAGGCAGGCAGGTTGAGGGCAGGACATGCCGCCTTCTAGGGTCTCCAGAGAAGCAACAAAGGTGGTCATaGGCTCATCAGAGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: PGRQVEGRTCRLLGSPEKQQRWS*AHQSCG
Trigger: CCCGCAGCTCTGATGAGCCCATGACCACCTTTGTTG...CTTCTCTGGAGACCCTAGAAGGCGGCATGTCCTGCCCTCAACCTGCCTGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp CCAGGCAGGCAGGTTGAGGGCAGGACATGCCGCCTTCTAGGGTCTCCAGAGAAGCCCGCAGCAAATCCATaGCTCCCTCCTGTGAAACTG +
Preference number: 4 (lower is better)
Translates to: PGRQVEGRTCRLLGSPEKPAANP*LPPVKL
Trigger: CAGTTTCACAGGAGGGAGCCATGGATTTGCTGCGGG...CTTCTCTGGAGACCCTAGAAGGCGGCATGTCCTGCCCTCAACCTGCCTGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS-3UTR TCA 90 bp GACATGCCGCCTTCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCACTTGGCCAGTGCAATaGCCTCCTCATCCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: DMPPSRVSREAVSTEDVGTWPVQ*PPHPSS
Trigger: AGAGCTCGGATGAGGAGGTCATTGCACTGGCCAAGT...GCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGAAGGCGGCATGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR TCA 90 bp TCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCACAAGATGATGTCAGCTaGTTCACATCACATGCCTCC +
Preference number: 4 (lower is better)
Translates to: SREAVSTEDVGRGGPKAAQDDVS*FTSHAS
Trigger: GGAGGCATGTGATGTGAATCAGCTGACATCATCTTG...TGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS-3UTR CCA 90 bp CCGCAGGTCAGGGTTCTTGGCATCCTTCAGGTTGGAGATACGACTCCGTACACGCCCGCAGCAAATCCATaGCTCCCTCCGCGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PQVRVLGILQVGDTTPYTPAANP*LPPRSS
Trigger: AGAAGAGCGCGGAGGGAGCCATGGATTTGCTGCGGG...CGTGTACGGAGTCGTATCTCCAACCTGAAGGATGCCAAGAACCCTGACCTGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR CCA 90 bp GACATGCCGCCTTCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCTCTGCTGGGGTGTTATaGCCCCACACAGCACATTCC +
Preference number: 4 (lower is better)
Translates to: DMPPSRVSREAVSTEDVGSAGVL*PHTAHS
Trigger: GGAATGTGCTGTGTGGGGCCATAACACCCCAGCAGA...GCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGAAGGCGGCATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR TCA 90 bp TCCAACAGGGGCTCACCTCTGAGGTCATCACAGCGATCTGCTGGGGTGTTATGGACAGGGGCTCACCTCTaGGGTCATCACAGCGATCTG +
Preference number: 4 (lower is better)
Translates to: SNRGSPLRSSQRSAGVLWTGAHL*GHHSDL
Trigger: CAGATCGCTGTGATGACCTCAGAGGTGAGCCCCTGT...CCATAACACCCCAGCAGATCGCTGTGATGACCTCAGAGGTGAGCCCCTGTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR GCA 90 bp GGCCCAAGGCTGCAGCACATCTACACGAGGGGTCAGCAGAACTTCCAGCGGTTTTCCTCATCCGAGCTCTaGTTCCGAAGGGCGTTGACA +
Preference number: 4 (lower is better)
Translates to: GPRLQHIYTRGQQNFQRFSSSEL*FRRALT
Trigger: TGTCAACGCCCTTCGGAAGCAGAGCTCGGATGAGGA...AAACCGCTGGAAGTTCTGCTGACCCCTCGTGTAGATGTGCTGCAGCCTTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR CCA 90 bp CGCAGGTCAGGGTTCTTGGCATCCTTCAGGTTGGAGATACGACTCCGTACACGGATCACAGCGATCTGCTaGGGTGTTATGGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: RRSGFLASFRLEIRLRTRITAIC*GVMAPH
Trigger: GTGTGGGGCCATAACACCCCAGCAGATCGCTGTGAT...CCGTGTACGGAGTCGTATCTCCAACCTGAAGGATGCCAAGAACCCTGACCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR GCA 90 bp AAAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGACGTGGGCAGAGGCATaGCCCTCCCCCGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: KETFNNEGERAERCNPGRTWAEA*PSPAPW
Trigger: CCAGGGAGCGGGGGAGGGGCATGCCTCTGCCCACGT...CCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp AAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGCGAGTCGACGGTGCCCTaGGCAGCTCCGGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: KKHLIMRGKGQKGAIQAGESTVP*AAPASC
Trigger: GCAAGAGGCCGGAGCTGCCCAGGGCACCGTCGACTC...GCCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR TCA 90 bp AAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGCAGGGCTTCCGAAGGGCGTTaGCAGACATCCCGACTCGGG +
Preference number: 4 (lower is better)
Translates to: KHLIMRGKGQKGAIQAGRASEGR*QTSRLG
Trigger: CCCGAGTCGGGATGTCTGTCAACGCCCTTCGGAAGC...CCTGCCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp AAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGCAGGACAGGTCTGTCTGCGTaGCGCCAGTGCGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: KHLIMRGKGQKGAIQAGRTGLSA*RQCGPS
Trigger: AGATGGCCCGCACTGGCGGCACGCAGACAGACCTGT...CCTGCCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp AAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGCGGAGAGGTGAAGGGCTaGAGGGCCAAGCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: KKHLIMRGKGQKGAIQAGGEVKG*RAKPAP
Trigger: TGGGGCAGGCTTGGCCCTGCAGCCCTTCACCTCTCC...GCCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR CCA 90 bp TCTTATACTTCATGTCTGTGTTTCCAACGTCCCGGAAGATGCGTGCAAGTGTTTTGTCAACGGAGGACGTaGGCCGGGGAGGGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: SYTSCLCFQRPGRCVQVFCQRRT*AGEGPR
Trigger: CCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACA...AAACACTTGCACGCATCTTCCGGGACGTTGGAAACACAGACATGAAGTATAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR TCA 90 bp AAAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGCCCGCCCTCGGCAGCTaGAGAACTTTCCCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: KETFNNEGERAERCNPGRPALGS*RTFPPL
Trigger: CAGGGGAGGGAAAGTTCTTCAGCTGCCGAGGGCGGG...CCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS-3UTR CCA 90 bp CAGGTTGGAGATACGACTCCGTACACGGTTCTTATACTTCATGTCTGTGTTTCCACATCCCGACTCGGGTaGACTGGAGCAGGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: QVGDTTPYTVLILHVCVSTSRLG*TGAGAA
Trigger: CGCTGCACCTGCTCCAGTCCACCCGAGTCGGGATGT...GGAAACACAGACATGAAGTATAAGAACCGTGTACGGAGTCGTATCTCCAACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR CCA 90 bp AAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGCAGGCCCGCTCCCTGGCTTTaGCATCGGAAGCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: KHLIMRGKGQKGAIQAGRPAPWL*HRKHPG
Trigger: TCCTGGATGCTTCCGATGCCAAAGCCAGGGAGCGGG...CCTGCCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp TCTTATACTTCATGTCTGTGTTTCCAACGTCCCGGAAGATGCGTGCAAGTGTTTCGCAGTCCGCACCGATaGCCACGTGGTCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: SYTSCLCFQRPGRCVQVFRSPHR*PRGHGP
Trigger: CGGACCATGACCACGTGGCCATCGGTGCGGACTGCG...AAACACTTGCACGCATCTTCCGGGACGTTGGAAACACAGACATGAAGTATAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR TCA 90 bp AAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGCCCGGAGGAAATGTGGTaGTCCTCGGAGTCGACGGTG +
Preference number: 4 (lower is better)
Translates to: KKHLIMRGKGQKGAIQAGPEEMW*SSESTV
Trigger: CACCGTCGACTCCGAGGATCACCACATTTCCTCCGG...GCCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp AAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGCGTGGACTGGAGCAGGTaGAGCGTGATAGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: KKHLIMRGKGQKGAIQAGVDWSR*SVIGMA
Trigger: GGCCATGCCTATCACGCTGCACCTGCTCCAGTCCAC...GCCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp AAAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGGGGAGGGCCCAAGGCTaGAGCACATCTACACGAGGG +
Preference number: 4 (lower is better)
Translates to: KETFNNEGERAERCNPGRGRAQG*STSTRG
Trigger: CCCTCGTGTAGATGTGCTGCAGCCTTGGGCCCTCCC...CCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp AAAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGACACAGGGGTCGGTCTaGCCACCCACACCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: KETFNNEGERAERCNPGRTQGSV*PPTPGG
Trigger: TCCACCAGGTGTGGGTGGGCAGACCGACCCCTGTGT...CCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR CCA 90 bp AAAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGCCCTCCCCCGCTCCCTaGCTTTGGCATCGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: KETFNNEGERAERCNPGRPSPAP*LWHRKH
Trigger: ATGCTTCCGATGCCAAAGCCAGGGAGCGGGGGAGGG...CCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR TCA 90 bp AAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGCAGGCCCATTCCTGACTaGGACCCAGCTTCAGGCTAC +
Preference number: 4 (lower is better)
Translates to: KKHLIMRGKGQKGAIQAGRPIPD*DPASGY
Trigger: GTAGCCTGAAGCTGGGTCTCAGTCAGGAATGGGCCT...GCCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR GCA 90 bp AAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGCAGGTCCTCATCCGAGCTCTaGTTCCGAAGGGCGTTGACA +
Preference number: 4 (lower is better)
Translates to: KHLIMRGKGQKGAIQAGRSSSEL*FRRALT
Trigger: TGTCAACGCCCTTCGGAAGCAGAGCTCGGATGAGGA...CCTGCCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp AAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGCGTTGAGGGCAGGACATaGCGCCTTCTAGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: KKHLIMRGKGQKGAIQAGVEGRT*RLLGSP
Trigger: TGGAGACCCTAGAAGGCGGCATGTCCTGCCCTCAAC...GCCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp AAAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGCCGACTCGGGTGGACTaGAGCAGGTGCAGCGTGATA +
Preference number: 4 (lower is better)
Translates to: KETFNNEGERAERCNPGRPTRVD*SRCSVI
Trigger: TATCACGCTGCACCTGCTCCAGTCCACCCGAGTCGG...CCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp AAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGCAGGCTCGGATGGCCTCCTTaGTCATGGCCTTACGGATCT +
Preference number: 4 (lower is better)
Translates to: KHLIMRGKGQKGAIQAGRLGWPP*SWPYGS
Trigger: AGATCCGTAAGGCCATGACCAAGGAGGCCATCCGAG...CCTGCCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp AAAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGTGGGCTCATCAGAGCTaGGGGTCTGCACCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: KETFNNEGERAERCNPGRWAHQS*GSAPVC
Trigger: ACACACAGGTGCAGACCCGCAGCTCTGATGAGCCCA...CCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp TCTTATACTTCATGTCTGTGTTTCCAACGTCCCGGAAGATGCGTGCAAGTGTTTTGGGCTCATCAGAGCTaGGGGTCTGCACCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SYTSCLCFQRPGRCVQVFWAHQS*GSAPVC
Trigger: ACACACAGGTGCAGACCCGCAGCTCTGATGAGCCCA...AAACACTTGCACGCATCTTCCGGGACGTTGGAAACACAGACATGAAGTATAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR CCA 90 bp AAAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGCCACTGCGGACTGGTTaGCGAGTGTCTGTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: KETFNNEGERAERCNPGRPLRTG*RVSVSH
Trigger: GTGAGAGACAGACACTCGCCAACCAGTCCGCAGTGG...CCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS-3UTR GCA 90 bp AAAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGTCCTCATCCGAGCTCTaGTTCCGAAGGGCGTTGACA +
Preference number: 4 (lower is better)
Translates to: KETFNNEGERAERCNPGRSSSEL*FRRALT
Trigger: TGTCAACGCCCTTCGGAAGCAGAGCTCGGATGAGGA...CCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp AAAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGATCACAGCGATCTGCTaGGGTGTTATGGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: KETFNNEGERAERCNPGRITAIC*GVMAPH
Trigger: GTGTGGGGCCATAACACCCCAGCAGATCGCTGTGAT...CCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp AAAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGCAATCTCCTCTTCCTTaGCCATCATCGCCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: KETFNNEGERAERCNPGRQSPLP*PSSPQE
Trigger: CTCCTGAGGCGATGATGGGCAAGGAAGAGGAGATTG...CCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343484.10
ENST00000395053.7
CDS-3UTR GCA 90 bp AAAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGGAGAGACTTGGCCAGTaGAATGACCTCCTCATCCGA +
Preference number: 4 (lower is better)
Translates to: KETFNNEGERAERCNPGRERLGQ*NDLLIR
Trigger: TCGGATGAGGAGGTCATTGCACTGGCCAAGTCTCTC...CCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp GGTTGGAGATACGACTCCGTACACGGTTCTTATACTTCATGTCTGTGTTTCCAAGAGAGACTTGGCCAGTaGAATGACCTCCTCATCCGA +
Preference number: 4 (lower is better)
Translates to: GWRYDSVHGSYTSCLCFQERLGQ*NDLLIR
Trigger: TCGGATGAGGAGGTCATTGCACTGGCCAAGTCTCTC...TTGGAAACACAGACATGAAGTATAAGAACCGTGTACGGAGTCGTATCTCCAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR GCA 90 bp AAAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGGAAAGGGCAGAAAGGTaGAATCCAGGCAGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: KETFNNEGERAERCNPGRERAER*NPGRQV
Trigger: AACCTGCCTGCCTGGATTGCACCTTTCTGCCCTTTC...CCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR GCA 90 bp AAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGCGGTTTCCACACTCGTTaGAGACAACAAAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: KKHLIMRGKGQKGAIQAGGFHTR*RQQRWS
Trigger: TGACCACCTTTGTTGTCTGCAACGAGTGTGGAAACC...GCCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CCA 90 bp AAAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGTGGCATCCTTCAGGTTaGAGATACGACTCCGTACAC +
Preference number: 4 (lower is better)
Translates to: KETFNNEGERAERCNPGRWHPSG*RYDSVH
Trigger: GTGTACGGAGTCGTATCTCCAACCTGAAGGATGCCA...CCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS GCA 90 bp GCGGGTGGCTCTCCCGGGACAAGGTCCAGGCCTGATCGCGGCCTCTaGCGGGGTTGCGGGAGTGAACGGCAGGGCTGGCCCGGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: AGGSPGTRSRPDRGL*RGCGSERQGWPGAG
Trigger: CCCTGCCCCGGGCCAGCCCTGCCGTTCACTCCCGCAACCCCGGCAGAGGCCGCGATCAGGCCTGGACCTTGTCCCGGGAGAGCCACCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415602.5
CDS CCA 90 bp GACACTGCCGCCCTCCCCCAGTTACTGCCCGGGGGTCCGACTCCGTaGGTGGGTGGCAGCTCGCCTCCGAAAGTCTGGCAGCACCGGCCC +
Preference number: 5 (lower is better)
Translates to: DTAALPQLLPGGPTP*VGGSSPPKVWQHRP
Trigger: GGGCCGGTGCTGCCAGACTTTCGGAGGCGAGCTGCCACCCACCCACGGAGTCGGACCCCCGGGCAGTAACTGGGGGAGGGCGGCAGTGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475792.1
CDS-3UTR CAA 90 bp CCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAGGGCAGCTCCGGCCTCTaGCGGCTGGGATCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: PEKLCQRRTWAGEGPRLQGSSGL*RLGSGA
Trigger: GGCCCCGGATCCCAGCCGCAAGAGGCCGGAGCTGCC...CTGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS CCA 90 bp CGCCCTCCCCCAGTTACTGCCCGGGGGTCCGACTCCGTGGGTGGGTaGCAGCTCGCCTCCGAAAGTCTGGCAGCACCGGCCCTCATCAGC +
Preference number: 5 (lower is better)
Translates to: RPPPVTARGSDSVGG*QLASESLAAPALIS
Trigger: GCTGATGAGGGCCGGTGCTGCCAGACTTTCGGAGGCGAGCTGCCACCCACCCACGGAGTCGGACCCCCGGGCAGTAACTGGGGGAGGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475792.1
CDS CCA 90 bp CTGCCGCCCTCCCCCAGTTACTGCCCGGGGGTCCGACTCCGTGGGTaGGTGGCAGCTCGCCTCCGAAAGTCTGGCAGCACCGGCCCTCAT +
Preference number: 5 (lower is better)
Translates to: LPPSPSYCPGVRLRG*VAARLRKSGSTGPH
Trigger: ATGAGGGCCGGTGCTGCCAGACTTTCGGAGGCGAGCTGCCACCCACCCACGGAGTCGGACCCCCGGGCAGTAACTGGGGGAGGGCGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475792.1
CDS-3UTR CAA 90 bp TCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGGGCAGCTCCGGCCTCTaGCGGCTGGGATCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: SPEKLCQRRTWAGEGPRLGSSGL*RLGSGA
Trigger: GGCCCCGGATCCCAGCCGCAAGAGGCCGGAGCTGCC...CAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CAA 90 bp GTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGGCAGCTCCGGCCTCTaGCGGCTGGGATCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: VSREAVSTEDVGRGGPKAGSSGL*RLGSGA
Trigger: GGCCCCGGATCCCAGCCGCAAGAGGCCGGAGCTGCC...AGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS TCA 90 bp GAGGCCCGCGCACACTGGGAGGCCTCTTGTGGGGCCCTGCAGGTGTaGGCGCGCGGTAGCTGGACGTGGCGTCTGGAAGGGGCCATTGCT +
Preference number: 5 (lower is better)
Translates to: EARAHWEASCGALQV*ARGSWTWRLEGAIA
Trigger: AGCAATGGCCCCTTCCAGACGCCACGTCCAGCTACCGCGCGCTCACACCTGCAGGGCCCCACAAGAGGCCTCCCAGTGTGCGCGGGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475792.1
CDS TCA 90 bp ACATTTCCACACCAGGCCCGGCAACTCAGTGCTCCCCAAGGGCGCTaGGCCGCCACCGAGGCCCTCTGCACCTGCAGCTCCACCGCCTGG +
Preference number: 5 (lower is better)
Translates to: TFPHQARQLSAPQGR*AATEALCTCSSTAW
Trigger: CCAGGCGGTGGAGCTGCAGGTGCAGAGGGCCTCGGTGGCGGCTCAGCGCCCTTGGGGAGCACTGAGTTGCCGGGCCTGGTGTGGAAATGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465111.5
CDS GCA 90 bp CCATCTTGTCCAGCCTCCGGGCGATCCGCGCAATCTCCTCTTCCTTaGCCATCATCGCCTCAGGAGCAGCGACCCCCGCGCCCGTCGCGC +
Preference number: 5 (lower is better)
Translates to: PSCPASGRSAQSPLP*PSSPQEQRPPRPSR
Trigger: GCGCGACGGGCGCGGGGGTCGCTGCTCCTGAGGCGATGATGGGCAAGGAAGAGGAGATTGCGCGGATCGCCCGGAGGCTGGACAAGATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339217.8
ENST00000343484.10
ENST00000395053.7
ENST00000476113.1
ENST00000487164.5
CDS GCA 90 bp ACACGCACACACGCAGGCGGGAGCCTCGCACACACGGGGAGCCACTaGGGACTGGTTGGCGAGTGTCTGTCTCTCACCCGGCCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: TRTHAGGSLAHTGSH*GLVGECLSLTRPRG
Trigger: GCCTCTGGGCCGGGTGAGAGACAGACACTCGCCAACCAGTCCGCAGTGGCTCCCCGTGTGTGCGAGGCTCCCGCCTGCGTGTGTGCGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS CCA 90 bp CACACGCAGGCGGGAGCCTCGCACACACGGGGAGCCACTGCGGACTaGTTGGCGAGTGTCTGTCTCTCACCCGGCCCAGAGGCAAGGCCT +
Preference number: 5 (lower is better)
Translates to: HTQAGASHTRGATAD*LASVCLSPGPEARP
Trigger: AGGCCTTGCCTCTGGGCCGGGTGAGAGACAGACACTCGCCAACCAGTCCGCAGTGGCTCCCCGTGTGTGCGAGGCTCCCGCCTGCGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS TCA 90 bp GGCTGGGGGTCTGGAGTTAAGGGACAGGGAAGGGTGCGGAGCCTGTaGCTGCGGGCGAGGGAGGGGTCTGAGTCCAGAGCGGGTGGCTCT +
Preference number: 5 (lower is better)
Translates to: GWGSGVKGQGRVRSL*LRAREGSESRAGGS
Trigger: AGAGCCACCCGCTCTGGACTCAGACCCCTCCCTCGCCCGCAGTCACAGGCTCCGCACCCTTCCCTGTCCCTTAACTCCAGACCCCCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415602.5
CDS GCA 90 bp GATCCGGGGCCTCTGAGGCATCCCTCGAGGACGTGGGCAGAGGCATaGCCCTCCCCCGCTCCCTGGCTTTGGCATCGGAAGCATCCAGGA +
Preference number: 5 (lower is better)
Translates to: DPGPLRHPSRTWAEA*PSPAPWLWHRKHPG
Trigger: TCCTGGATGCTTCCGATGCCAAAGCCAGGGAGCGGGGGAGGGGCATGCCTCTGCCCACGTCCTCGAGGGATGCCTCAGAGGCCCCGGATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339217.8
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
ENST00000415602.5
ENST00000440819.5
ENST00000458442.1
ENST00000465111.5
ENST00000470559.5
ENST00000487164.5
CDS GCA 90 bp TTCTTCAAGAGGCCCGCGCACACTGGGAGGCCTCTTGTGGGGCCCTaGAGGTGTGAGCGCGCGGTAGCTGGACGTGGCGTCTGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: FFKRPAHTGRPLVGP*RCERAVAGRGVWKG
Trigger: CCCCTTCCAGACGCCACGTCCAGCTACCGCGCGCTCACACCTGCAGGGCCCCACAAGAGGCCTCCCAGTGTGCGCGGGCCTCTTGAAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475792.1
CDS-3UTR CAA 90 bp CCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAGATCCAGGCAGGCAGGTaGAGGGCAGGACATGCCGCC +
Preference number: 5 (lower is better)
Translates to: PEKLCQRRTWAGEGPRLQIQAGR*RAGHAA
Trigger: GGCGGCATGTCCTGCCCTCAACCTGCCTGCCTGGAT...CTGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CAA 90 bp GGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGATCCAGGCAGGCAGGTaGAGGGCAGGACATGCCGCC +
Preference number: 5 (lower is better)
Translates to: GSPEKLCQRRTWAGEGPRIQAGR*RAGHAA
Trigger: GGCGGCATGTCCTGCCCTCAACCTGCCTGCCTGGAT...CCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS GCA 90 bp CACATGCCTCCGGACTTCCTCCTCCACGGAGCTTCCCCAGCAAGCTaGTCAGGGCCGCCAGACGCTCCCGGGCCCTCAGAATTTGCACCC +
Preference number: 5 (lower is better)
Translates to: HMPPDFLLHGASPAS*SGPPDAPGPSEFAP
Trigger: GGGTGCAAATTCTGAGGGCCCGGGAGCGTCTGGCGGCCCTGAGCAGCTTGCTGGGGAAGCTCCGTGGAGGAGGAAGTCCGGAGGCATGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS-3UTR CAA 90 bp TCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCCCCCGCTCCCTGGCTTaGGCATCGGAAGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: SRVSREAVSTEDVGRGGPPRSLA*ASEASR
Trigger: CCTGGATGCTTCCGATGCCAAAGCCAGGGAGCGGGG...GGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGA
67% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS TCA 90 bp GGGCCGCCAGACGCTCCCGGGCCCTCAGAATTTGCACCCAGAGGCTaGCAGCATCAGAACCATCGATTCTCCTGTGGGGCCTCGCCGCAG +
Preference number: 5 (lower is better)
Translates to: GPPDAPGPSEFAPRG*QHQNHRFSCGASPQ
Trigger: CTGCGGCGAGGCCCCACAGGAGAATCGATGGTTCTGATGCTGTCAGCCTCTGGGTGCAAATTCTGAGGGCCCGGGAGCGTCTGGCGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS TCA 90 bp CAAAGTCTCGCTGTGGCCGCAAGACAACAGAGGCCCAGGCCGCAGTaGACAGAGCCGGCCAGAGGCTCCAGCGCCCAGACACTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: QSLAVAARQQRPRPQ*TEPARGSSAQTLPE
Trigger: CTCTGGGAGTGTCTGGGCGCTGGAGCCTCTGGCCGGCTCTGTTCACTGCGGCCTGGGCCTCTGTTGTCTTGCGGCCACAGCGAGACTTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440819.5
CDS GCA 90 bp AAGTGCGGGGGCCTCTGCCGAGGCTGCGTGGGCAAGGCCCCTGCCTaGAAAGTCAGCTACCAGGGAGCAGATTCTGGGCTCTGCACGTTG +
Preference number: 5 (lower is better)
Translates to: KCGGLCRGCVGKAPA*KVSYQGADSGLCTL
Trigger: CAACGTGCAGAGCCCAGAATCTGCTCCCTGGTAGCTGACTTTGCAGGCAGGGGCCTTGCCCACGCAGCCTCGGCAGAGGCCCCCGCACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475792.1
CDS-3UTR CAA 90 bp CTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCTGCTTCCGAAGGGCGTaGACAGACATCCCGACTCGG +
Preference number: 5 (lower is better)
Translates to: LQRSCVNGGRGPGRAQGCCFRRA*TDIPTR
Trigger: CCGAGTCGGGATGTCTGTCAACGCCCTTCGGAAGCA...GCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CAA 90 bp CTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCATCTCGCGGCACTTGTaGCGCACGGCATCACAGGTG +
Preference number: 5 (lower is better)
Translates to: LQRSCVNGGRGPGRAQGCISRHL*RTASQV
Trigger: CACCTGTGATGCCGTGCGCAACAAGTGCCGCGAGAT...GCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CAA 90 bp CTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCGCCACTGCGGACTGGTaGGCGAGTGTCTGTCTCTCA +
Preference number: 5 (lower is better)
Translates to: LQRSCVNGGRGPGRAQGCATADW*ASVCLS
Trigger: TGAGAGACAGACACTCGCCAACCAGTCCGCAGTGGC...GCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS-3UTR CAA 90 bp TCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCCCGGGCCCTCAGAATTaGCACCCAGAGGCTGACAGC +
Preference number: 5 (lower is better)
Translates to: SRVSREAVSTEDVGRGGPPGPQN*HPEADS
Trigger: GCTGTCAGCCTCTGGGTGCAAATTCTGAGGGCCCGG...GGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS GCA 90 bp GCATCAGAACCATCGATTCTCCTGTGGGGCCTCGCCGCAGGGTGCTaGTCCAGCCCCTACTCCCGCCCTCGGCAGCTGAAGAACTTTCCC +
Preference number: 5 (lower is better)
Translates to: ASEPSILLWGLAAGC*SSPYSRPRQLKNFP
Trigger: GGGAAAGTTCTTCAGCTGCCGAGGGCGGGAGTAGGGGCTGGAGCAGCACCCTGCGGCGAGGCCCCACAGGAGAATCGATGGTTCTGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS-3UTR CAA 90 bp GGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGTTCTTGGTCACCATCTaGTCCAGCCTCCGGGCGATC +
Preference number: 5 (lower is better)
Translates to: GSPEKLCQRRTWAGEGPRFLVTI*SSLRAI
Trigger: GATCGCCCGGAGGCTGGACAAGATGGTGACCAAGAA...CCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343484.10
ENST00000395053.7
CDS-3UTR CAA 90 bp TCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGTGCTTCCGAAGGGCGTaGACAGACATCCCGACTCGG +
Preference number: 5 (lower is better)
Translates to: SPEKLCQRRTWAGEGPRLCFRRA*TDIPTR
Trigger: CCGAGTCGGGATGTCTGTCAACGCCCTTCGGAAGCA...CAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CAA 90 bp TCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAATCTCGCGGCACTTGTaGCGCACGGCATCACAGGTG +
Preference number: 5 (lower is better)
Translates to: SREAVSTEDVGRGGPKAAISRHL*RTASQV
Trigger: CACCTGTGATGCCGTGCGCAACAAGTGCCGCGAGAT...TGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CAA 90 bp TCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGAGCATCTCGCGGCACTaGTTGCGCACGGCATCACAG +
Preference number: 5 (lower is better)
Translates to: SPEKLCQRRTWAGEGPRLSISRH*LRTASQ
Trigger: CTGTGATGCCGTGCGCAACAAGTGCCGCGAGATGCT...CAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS TCA 90 bp GCTGAGACACCCCACCTCCAGAGAATGGAGCTGGGAGGGGCAGCCTaGGCCTGCTCACCCACCTTCCAGCGGTTTCCACACTCGTTGCAG +
Preference number: 5 (lower is better)
Translates to: AETPHLQRMELGGAA*ACSPTFQRFPHSLQ
Trigger: CTGCAACGAGTGTGGAAACCGCTGGAAGGTGGGTGAGCAGGCTCAGGCTGCCCCTCCCAGCTCCATTCTCTGGAGGTGGGGTGTCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461072.5
ENST00000475236.1
CDS TCA 90 bp CAGAACTGCGAGAAAGGGGGTGAGGCCTCCAGCCTTGTGGCCACATaGGATCCCCCAGAGTGGAAGGCCGCACAGGCTCACCCAAGGCTG +
Preference number: 5 (lower is better)
Translates to: QNCEKGGEASSLVAT*DPPEWKAAQAHPRL
Trigger: CAGCCTTGGGTGAGCCTGTGCGGCCTTCCACTCTGGGGGATCTCATGTGGCCACAAGGCTGGAGGCCTCACCCCCTTTCTCGCAGTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000461072.5
ENST00000475236.1
CDS GCA 90 bp GAGCCGGCCAGAGGCTCCAGCGCCCAGACACTCCCAGAGGAGGCTTaGCCGACCTCCTGGCTCTTATATAAGCACACCGGCTCTTTTCGG +
Preference number: 5 (lower is better)
Translates to: EPARGSSAQTLPEEA*PTSWLLYKHTGSFR
Trigger: CCGAAAAGAGCCGGTGTGCTTATATAAGAGCCAGGAGGTCGGGCAAGCCTCCTCTGGGAGTGTCTGGGCGCTGGAGCCTCTGGCCGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440819.5
CDS GCA 90 bp AGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTaGAGCACATCTACACGAGGGGTCAGCAGAACTGCGAGAAAGGGG +
Preference number: 5 (lower is better)
Translates to: RSCVNGGRGPGRAQG*STSTRGVSRTARKG
Trigger: CCCCTTTCTCGCAGTTCTGCTGACCCCTCGTGTAGATGTGCTGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461072.5
ENST00000475236.1
CDS CCA 90 bp ATTTGCACCCAGAGGCTGACAGCATCAGAACCATCGATTCTCCTGTaGGGCCTCGCCGCAGGGTGCTGCTCCAGCCCCTACTCCCGCCCT +
Preference number: 5 (lower is better)
Translates to: ICTQRLTASEPSILL*GLAAGCCSSPYSRP
Trigger: AGGGCGGGAGTAGGGGCTGGAGCAGCACCCTGCGGCGAGGCCCCACAGGAGAATCGATGGTTCTGATGCTGTCAGCCTCTGGGTGCAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS-3UTR CAA 90 bp GACATGCCGCCTTCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCCCCGCTCCCTGGCTTaGGCATCGGAAGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: DMPPSRVSREAVSTEDVGPRSLA*ASEASR
Trigger: CCTGGATGCTTCCGATGCCAAAGCCAGGGAGCGGGG...GCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGAAGGCGGCATGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CAA 90 bp CGCCTTCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGATCTCGCGGCACTTGTaGCGCACGGCATCACAGGTG +
Preference number: 5 (lower is better)
Translates to: RLLGSPEKLCQRRTWAGEISRHL*RTASQV
Trigger: CACCTGTGATGCCGTGCGCAACAAGTGCCGCGAGAT...CTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGAAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CAA 90 bp GTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTCGCAGGTCAGGGTTCTaGGCATCCTTCAGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: VSREAVSTEDVGRGGPKARRSGF*ASFRLE
Trigger: CTCCAACCTGAAGGATGCCAAGAACCCTGACCTGCG...AGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CAA 90 bp GACATGCCGCCTTCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCATCCAGGCAGGCAGGTaGAGGGCAGGACATGCCGCC +
Preference number: 5 (lower is better)
Translates to: DMPPSRVSREAVSTEDVGIQAGR*RAGHAA
Trigger: GGCGGCATGTCCTGCCCTCAACCTGCCTGCCTGGAT...GCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGAAGGCGGCATGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS TCA 90 bp GCCGTCCCCAGCCTCCCAGAGCCCAGTTTGGGTCATTCGGGCTTCTaGGTAGAGTTACTTCTTCAAGAGGCCCGCGCACACTGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: AVPSLPEPSLGHSGF*VELLLQEARAHWEA
Trigger: GGCCTCCCAGTGTGCGCGGGCCTCTTGAAGAAGTAACTCTACTCAGAAGCCCGAATGACCCAAACTGGGCTCTGGGAGGCTGGGGACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475792.1
CDS GCA 90 bp ACAGCATCAGAACCATCGATTCTCCTGTGGGGCCTCGCCGCAGGGTaGTGCTCCAGCCCCTACTCCCGCCCTCGGCAGCTGAAGAACTTT +
Preference number: 5 (lower is better)
Translates to: TASEPSILLWGLAAG*CSSPYSRPRQLKNF
Trigger: AAAGTTCTTCAGCTGCCGAGGGCGGGAGTAGGGGCTGGAGCAGCACCCTGCGGCGAGGCCCCACAGGAGAATCGATGGTTCTGATGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS CCA 90 bp GCCCCTTCAAAGTCCTCACACACAGCCTCCTCCAAAGTCTCGCTGTaGCCGCAAGACAACAGAGGCCCAGGCCGCAGTGAACAGAGCCGG +
Preference number: 5 (lower is better)
Translates to: APSKSSHTASSKVSL*PQDNRGPGRSEQSR
Trigger: CCGGCTCTGTTCACTGCGGCCTGGGCCTCTGTTGTCTTGCGGCCACAGCGAGACTTTGGAGGAGGCTGTGTGTGAGGACTTTGAAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440819.5
CDS-3UTR CAA 90 bp TCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCAGCAATCTCCTCTTCCTaGCCCATCATCGCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: SREAVSTEDVGRGGPKAAAISSS*PIIASG
Trigger: TCCTGAGGCGATGATGGGCAAGGAAGAGGAGATTGC...TGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343484.10
ENST00000395053.7
CDS-3UTR CAA 90 bp TCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCGCAATCTCCTCTTCCTaGCCCATCATCGCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: SRVSREAVSTEDVGRGGPAISSS*PIIASG
Trigger: TCCTGAGGCGATGATGGGCAAGGAAGAGGAGATTGC...GGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343484.10
ENST00000395053.7
CDS TCA 90 bp AAACCCAGGCCCACAGCCCCTACCCAAAGGATATATTCCTCGATCTaGGCCGACAGGCGCTCGCAGTCCGCACCGATGGCCACGTGGTCA +
Preference number: 5 (lower is better)
Translates to: KPRPTAPTQRIYSSI*ADRRSQSAPMATWS
Trigger: TGACCACGTGGCCATCGGTGCGGACTGCGAGCGCCTGTCGGCTCAGATCGAGGAATATATCCTTTGGGTAGGGGCTGTGGGCCTGGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395053.7
ENST00000465111.5
ENST00000487164.5
CDS GCA 90 bp AGCAAGCTGCTCAGGGCCGCCAGACGCTCCCGGGCCCTCAGAATTTaGACCCAGAGGCTGACAGCATCAGAACCATCGATTCTCCTGTGG +
Preference number: 5 (lower is better)
Translates to: SKLLRAARRSRALRI*TQRLTASEPSILLW
Trigger: CCACAGGAGAATCGATGGTTCTGATGCTGTCAGCCTCTGGGTGCAAATTCTGAGGGCCCGGGAGCGTCTGGCGGCCCTGAGCAGCTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS CCA 90 bp GGCTCCAGCGCCCAGACACTCCCAGAGGAGGCTTGCCCGACCTCCTaGCTCTTATATAAGCACACCGGCTCTTTTCGGAGGGTGTCCACA +
Preference number: 5 (lower is better)
Translates to: GSSAQTLPEEACPTS*LLYKHTGSFRRVST
Trigger: TGTGGACACCCTCCGAAAAGAGCCGGTGTGCTTATATAAGAGCCAGGAGGTCGGGCAAGCCTCCTCTGGGAGTGTCTGGGCGCTGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440819.5
CDS-3UTR CAA 90 bp CCAGGCAGGCAGGTTGAGGGCAGGACATGCCGCCTTCTAGGGTCTCCAGAGAAGTTCTTGGTCACCATCTaGTCCAGCCTCCGGGCGATC +
Preference number: 5 (lower is better)
Translates to: PGRQVEGRTCRLLGSPEKFLVTI*SSLRAI
Trigger: GATCGCCCGGAGGCTGGACAAGATGGTGACCAAGAA...CTTCTCTGGAGACCCTAGAAGGCGGCATGTCCTGCCCTCAACCTGCCTGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343484.10
ENST00000395053.7
CDS-3UTR CAA 90 bp GACATGCCGCCTTCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCCCTCCGCGCTCTTCTaGGTCACCATCTTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: DMPPSRVSREAVSTEDVGPSALF*VTILSS
Trigger: GCTGGACAAGATGGTGACCAAGAAGAGCGCGGAGGG...GCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGAAGGCGGCATGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343484.10
ENST00000395053.7
CDS-3UTR CAA 90 bp TCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCGACTTGATGAGAGACTaGGCCAGTGCAATGACCTCC +
Preference number: 5 (lower is better)
Translates to: SRVSREAVSTEDVGRGGPDLMRD*ASAMTS
Trigger: GGAGGTCATTGCACTGGCCAAGTCTCTCATCAAGTC...GGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CAA 90 bp GACATGCCGCCTTCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCAGCATCTCGCGGCACTaGTTGCGCACGGCATCACAG +
Preference number: 5 (lower is better)
Translates to: DMPPSRVSREAVSTEDVGSISRH*LRTASQ
Trigger: CTGTGATGCCGTGCGCAACAAGTGCCGCGAGATGCT...GCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGAAGGCGGCATGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CAA 90 bp CTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGCTTGGCATCCTTCAGGTaGGAGATACGACTCCGTACA +
Preference number: 5 (lower is better)
Translates to: LQRSCVNGGRGPGRAQGCLASFR*EIRLRT
Trigger: TGTACGGAGTCGTATCTCCAACCTGAAGGATGCCAA...GCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CAA 90 bp TCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTGTTCTTTTTCCTGCACTaGCCGCAGGTGAACAGGTCT +
Preference number: 5 (lower is better)
Translates to: SPEKLCQRRTWAGEGPRLFFFLH*PQVNRS
Trigger: AGACCTGTTCACCTGCGGCAAGTGCAGGAAAAAGAA...CAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CAA 90 bp CCAGGCAGGCAGGTTGAGGGCAGGACATGCCGCCTTCTAGGGTCTCCAGAGAAGGACTTGATGAGAGACTaGGCCAGTGCAATGACCTCC +
Preference number: 5 (lower is better)
Translates to: PGRQVEGRTCRLLGSPEKDLMRD*ASAMTS
Trigger: GGAGGTCATTGCACTGGCCAAGTCTCTCATCAAGTC...CTTCTCTGGAGACCCTAGAAGGCGGCATGTCCTGCCCTCAACCTGCCTGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CAA 90 bp CGCCTTCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCCGGGGAGTTGGCATCCTTCAGGTaGGAGATACGACTCCGTACA +
Preference number: 5 (lower is better)
Translates to: RLLGSPEKLCQRRTWAGELASFR*EIRLRT
Trigger: TGTACGGAGTCGTATCTCCAACCTGAAGGATGCCAA...CTCCCCGGCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGAAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS GCA 90 bp AGGGCTCTGCCCACATGTTCCTGCACCACAGCAGGGAACCCTTACTaGTCAGTCAAGAAGGGGAGGGGTTCTGCAGCCTCAAGCATTCCA +
Preference number: 5 (lower is better)
Translates to: RALPTCSCTTAGNPY*SVKKGRGSAASSIP
Trigger: TGGAATGCTTGAGGCTGCAGAACCCCTCCCCTTCTTGACTGAGCAGTAAGGGTTCCCTGCTGTGGTGCAGGAACATGTGGGCAGAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458442.1
ENST00000465111.5
CDS GCA 90 bp TCCAATGCACCTCGTTCTCTCCGCCTTGTCTCCCCACCCAAGATCTaGGTTTCCTCCAGGTCCTCAACACTGACGAGGCCAGGCACAAAC +
Preference number: 5 (lower is better)
Translates to: SNAPRSLRLVSPPKI*VSSRSSTLTRPGTN
Trigger: GTTTGTGCCTGGCCTCGTCAGTGTTGAGGACCTGGAGGAAACGCAGATCTTGGGTGGGGAGACAAGGCGGAGAGAACGAGGTGCATTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465111.5
CDS CCA 90 bp TGGCTCCCTCCTCAGACTCCAAACTGTTGCCGGCGACAAATGCTATaGGAGACGGAGGGTGACAAACGCGCGCTCTTCTTGGTCACCATC +
Preference number: 5 (lower is better)
Translates to: WLPPQTPNCCRRQML*ETEGDKRALFLVTI
Trigger: GATGGTGACCAAGAAGAGCGCGCGTTTGTCACCCTCCGTCTCCCATAGCATTTGTCGCCGGCAACAGTTTGGAGTCTGAGGAGGGAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339217.8
CDS CCA 90 bp TGGCTCCCTCCTCAGACTCCAAACTGTTGCCGGCGACAAATGCTATaGGAGACGGAGGGTGACAAACGCTGTAAGAGACGGAGCGTGGGA +
Preference number: 5 (lower is better)
Translates to: WLPPQTPNCCRRQML*ETEGDKRCKRRSVG
Trigger: TCCCACGCTCCGTCTCTTACAGCGTTTGTCACCCTCCGTCTCCCATAGCATTTGTCGCCGGCAACAGTTTGGAGTCTGAGGAGGGAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415602.5
CDS GCA 90 bp ATCCATGGCTCCCTCCTCAGACTCCAAACTGTTGCCGGCGACAAATaGTATGGGAGACGGAGGGTGACAAACGCGCGCTCTTCTTGGTCA +
Preference number: 5 (lower is better)
Translates to: IHGSLLRLQTVAGDK*YGRRRVTNARSSWS
Trigger: TGACCAAGAAGAGCGCGCGTTTGTCACCCTCCGTCTCCCATAGCATTTGTCGCCGGCAACAGTTTGGAGTCTGAGGAGGGAGCCATGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339217.8
CDS GCA 90 bp ATCCATGGCTCCCTCCTCAGACTCCAAACTGTTGCCGGCGACAAATaGTATGGGAGACGGAGGGTGACAAACGCTGTAAGAGACGGAGCG +
Preference number: 5 (lower is better)
Translates to: IHGSLLRLQTVAGDK*YGRRRVTNAVRDGA
Trigger: CGCTCCGTCTCTTACAGCGTTTGTCACCCTCCGTCTCCCATAGCATTTGTCGCCGGCAACAGTTTGGAGTCTGAGGAGGGAGCCATGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415602.5
CDS GCA 90 bp AAATTCCTCTACCTGGAGACACCCAGGGCTCTGCCCACATGTTCCTaGACCACAGCAGGGAACCCTTACTGCTCAGTCAAGAAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: KFLYLETPRALPTCS*TTAGNPYCSVKKGR
Trigger: CCTCCCCTTCTTGACTGAGCAGTAAGGGTTCCCTGCTGTGGTGCAGGAACATGTGGGCAGAGCCCTGGGTGTCTCCAGGTAGAGGAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465111.5
CDS CCA 90 bp GGGATCCAACCTCAGACTCCAAACTGTTGCCGGCGACAAATGCTATaGGAGACGGAGGGTGACAAACGCGCGCTCTTCTTGGTCACCATC +
Preference number: 5 (lower is better)
Translates to: GIQPQTPNCCRRQML*ETEGDKRALFLVTI
Trigger: GATGGTGACCAAGAAGAGCGCGCGTTTGTCACCCTCCGTCTCCCATAGCATTTGTCGCCGGCAACAGTTTGGAGTCTGAGGTTGGATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476113.1
CDS-3UTR CAA 90 bp GACATGCCGCCTTCTAGGGTCTCCAGAGAAGCTGTGTCAACGGAGGACGTGGGCTTCTTTTTCCTGCACTaGCCGCAGGTGAACAGGTCT +
Preference number: 5 (lower is better)
Translates to: DMPPSRVSREAVSTEDVGFFFLH*PQVNRS
Trigger: AGACCTGTTCACCTGCGGCAAGTGCAGGAAAAAGAA...GCCCACGTCCTCCGTTGACACAGCTTCTCTGGAGACCCTAGAAGGCGGCATGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS GCA 90 bp GAAGCTCCAGAAGAAAAGGGGATCCAACCTCAGACTCCAAACTGTTaGCGGCGACAAATGCTATGGGAGACGGAGGGTGACAAACGCGCG +
Preference number: 5 (lower is better)
Translates to: EAPEEKGIQPQTPNC*RRQMLWETEGDKRA
Trigger: CGCGCGTTTGTCACCCTCCGTCTCCCATAGCATTTGTCGCCGGCAACAGTTTGGAGTCTGAGGTTGGATCCCCTTTTCTTCTGGAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476113.1
CDS GCA 90 bp AAAAGGGGATCCAACCTCAGACTCCAAACTGTTGCCGGCGACAAATaGTATGGGAGACGGAGGGTGACAAACGCGCGCTCTTCTTGGTCA +
Preference number: 5 (lower is better)
Translates to: KRGSNLRLQTVAGDK*YGRRRVTNARSSWS
Trigger: TGACCAAGAAGAGCGCGCGTTTGTCACCCTCCGTCTCCCATAGCATTTGTCGCCGGCAACAGTTTGGAGTCTGAGGTTGGATCCCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476113.1
CDS-3UTR CAA 90 bp AAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGCCCCCGCTCCCTGGCTTaGGCATCGGAAGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: KKHLIMRGKGQKGAIQAGPRSLA*ASEASR
Trigger: CCTGGATGCTTCCGATGCCAAAGCCAGGGAGCGGGG...GCCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CAA 90 bp CGCAGGTCAGGGTTCTTGGCATCCTTCAGGTTGGAGATACGACTCCGTACACGGTTCTTTTTCCTGCACTaGCCGCAGGTGAACAGGTCT +
Preference number: 5 (lower is better)
Translates to: RRSGFLASFRLEIRLRTRFFFLH*PQVNRS
Trigger: AGACCTGTTCACCTGCGGCAAGTGCAGGAAAAAGAA...CCGTGTACGGAGTCGTATCTCCAACCTGAAGGATGCCAAGAACCCTGACCTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR CAA 90 bp AAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGCAGGCGCAGGTCAGGGTTCTaGGCATCCTTCAGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: KHLIMRGKGQKGAIQAGRRRSGF*ASFRLE
Trigger: CTCCAACCTGAAGGATGCCAAGAACCCTGACCTGCG...CCTGCCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CAA 90 bp AAAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGAGCATCTCGCGGCACTaGTTGCGCACGGCATCACAG +
Preference number: 5 (lower is better)
Translates to: KETFNNEGERAERCNPGRSISRH*LRTASQ
Trigger: CTGTGATGCCGTGCGCAACAAGTGCCGCGAGATGCT...CCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CAA 90 bp AAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGCCGCAGGTCAGGGTTCTaGGCATCCTTCAGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: KKHLIMRGKGQKGAIQAGRRSGF*ASFRLE
Trigger: CTCCAACCTGAAGGATGCCAAGAACCCTGACCTGCG...GCCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CAA 90 bp AAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGCAGGCGGTTTCCACACTCGTaGCAGACAACAAAGGTGGTC +
Preference number: 5 (lower is better)
Translates to: KHLIMRGKGQKGAIQAGRRFPHS*QTTKVV
Trigger: GACCACCTTTGTTGTCTGCAACGAGTGTGGAAACCG...CCTGCCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CAA 90 bp TCTTATACTTCATGTCTGTGTTTCCAACGTCCCGGAAGATGCGTGCAAGTGTTTGACTTGATGAGAGACTaGGCCAGTGCAATGACCTCC +
Preference number: 5 (lower is better)
Translates to: SYTSCLCFQRPGRCVQVFDLMRD*ASAMTS
Trigger: GGAGGTCATTGCACTGGCCAAGTCTCTCATCAAGTC...AAACACTTGCACGCATCTTCCGGGACGTTGGAAACACAGACATGAAGTATAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS-3UTR CAA 90 bp AAAGAAACATTTAATAATGAGGGGGAAAGGGCAGAAAGGTGCAATCCAGGCAGGCGGTTTCCACACTCGTaGCAGACAACAAAGGTGGTC +
Preference number: 5 (lower is better)
Translates to: KETFNNEGERAERCNPGRRFPHS*QTTKVV
Trigger: GACCACCTTTGTTGTCTGCAACGAGTGTGGAAACCG...CCTGCCTGGATTGCACCTTTCTGCCCTTTCCCCCTCATTATTAAATGTTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
CDS-3UTR CAA 90 bp TCTTATACTTCATGTCTGTGTTTCCAACGTCCCGGAAGATGCGTGCAAGTGTTTTTGGCATCCTTCAGGTaGGAGATACGACTCCGTACA +
Preference number: 5 (lower is better)
Translates to: SYTSCLCFQRPGRCVQVFLASFR*EIRLRT
Trigger: TGTACGGAGTCGTATCTCCAACCTGAAGGATGCCAA...AAACACTTGCACGCATCTTCCGGGACGTTGGAAACACAGACATGAAGTATAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395053.7
CDS CCA 90 bp AAGGACTTTAGATCTCAACAGACAATATCACCTCCTTCTGCCTACTaGAGGAGAACACAAGGCAGTGACAATTTGGAGATTCAACCTGGG +
Preference number: 5 (lower is better)
Translates to: KDFRSQQTISPPSAY*RRTQGSDNLEIQPG
Trigger: CCCAGGTTGAATCTCCAAATTGTCACTGCCTTGTGTTCTCCTCCAGTAGGCAGAAGGAGGTGATATTGTCTGTTGAGATCTAAAGTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465111.5
CDS CCA 72 bp AGGATGCCCAGGCCGGGATGGAGGAAGGCAAGGGGCTaGCGCGGCCCGCAGAGGAGGCCCGAACACCCCGGG +
Preference number: 6 (lower is better)
Translates to: RMPRPGWRKARG*RGPQRRPEHPG
Trigger: CCCGGGGTGTTCGGGCCTCCTCTGCGGGCCGCGCCAGCCCCTTGCCTTCCTCCATCCCGGCCTGGGCATCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415602.5
CDS TCA 72 bp CACCAGGCCCGGCAACTCAGTGCTCCCCAAGGGCGCTaGGCCGCCACCGAGGCCCTCTGCACCTGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: HQARQLSAPQGR*AATEALCTCSS
Trigger: GGAGCTGCAGGTGCAGAGGGCCTCGGTGGCGGCTCAGCGCCCTTGGGGAGCACTGAGTTGCCGGGCCTGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465111.5
CDS GCA 72 bp TCTCCCGGGACAAGGTCCAGGCCTGATCGCGGCCTCTaGCGGGGTTGCGGGAGTGAACGGCAGGGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: SPGTRSRPDRGL*RGCGSERQGWP
Trigger: GGGCCAGCCCTGCCGTTCACTCCCGCAACCCCGGCAGAGGCCGCGATCAGGCCTGGACCTTGTCCCGGGAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415602.5
CDS GCA 72 bp GCAACCAGCGGGACACTGCCGCCCTCCCCCAGTTACTaGCCGGGGGTCCGACTCCGTGGGTGGGTGGCAGCT +
Preference number: 6 (lower is better)
Translates to: ATSGTLPPSPSY*PGVRLRGWVAA
Trigger: AGCTGCCACCCACCCACGGAGTCGGACCCCCGGGCAGTAACTGGGGGAGGGCGGCAGTGTCCCGCTGGTTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475792.1
CDS TCA 72 bp CAGCTCCGGCCTCTTGCGGCTGGGATCCGGGGCCTCTaGGGCATCCCTCGAGGACGTGGGCAGAGGCATGCC +
Preference number: 6 (lower is better)
Translates to: QLRPLAAGIRGL*GIPRGRGQRHA
Trigger: GGCATGCCTCTGCCCACGTCCTCGAGGGATGCCTCAGAGGCCCCGGATCCCAGCCGCAAGAGGCCGGAGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339217.8
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
ENST00000440819.5
ENST00000458442.1
ENST00000465111.5
ENST00000487164.5
CDS CCA 72 bp CCAGTTACTGCCCGGGGGTCCGACTCCGTGGGTGGGTaGCAGCTCGCCTCCGAAAGTCTGGCAGCACCGGCC +
Preference number: 6 (lower is better)
Translates to: PVTARGSDSVGG*QLASESLAAPA
Trigger: GGCCGGTGCTGCCAGACTTTCGGAGGCGAGCTGCCACCCACCCACGGAGTCGGACCCCCGGGCAGTAACTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475792.1
CDS CCA 72 bp GCCCTCCCCCAGTTACTGCCCGGGGGTCCGACTCCGTaGGTGGGTGGCAGCTCGCCTCCGAAAGTCTGGCAG +
Preference number: 6 (lower is better)
Translates to: ALPQLLPGGPTP*VGGSSPPKVWQ
Trigger: CTGCCAGACTTTCGGAGGCGAGCTGCCACCCACCCACGGAGTCGGACCCCCGGGCAGTAACTGGGGGAGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475792.1
CDS TCA 72 bp GCACACTGGGAGGCCTCTTGTGGGGCCCTGCAGGTGTaGGCGCGCGGTAGCTGGACGTGGCGTCTGGAAGGG +
Preference number: 6 (lower is better)
Translates to: AHWEASCGALQV*ARGSWTWRLEG
Trigger: CCCTTCCAGACGCCACGTCCAGCTACCGCGCGCTCACACCTGCAGGGCCCCACAAGAGGCCTCCCAGTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475792.1
CDS GCA 72 bp CCAGCCTCCGGGCGATCCGCGCAATCTCCTCTTCCTTaGCCATCATCGCCTCAGGAGCAGCGACCCCCGCGC +
Preference number: 6 (lower is better)
Translates to: PASGRSAQSPLP*PSSPQEQRPPR
Trigger: GCGCGGGGGTCGCTGCTCCTGAGGCGATGATGGGCAAGGAAGAGGAGATTGCGCGGATCGCCCGGAGGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339217.8
ENST00000343484.10
ENST00000395053.7
ENST00000476113.1
ENST00000487164.5
CDS GCA 72 bp CCATCGATTCTCCTGTGGGGCCTCGCCGCAGGGTGCTaGTCCAGCCCCTACTCCCGCCCTCGGCAGCTGAAG +
Preference number: 6 (lower is better)
Translates to: PSILLWGLAAGC*SSPYSRPRQLK
Trigger: CTTCAGCTGCCGAGGGCGGGAGTAGGGGCTGGAGCAGCACCCTGCGGCGAGGCCCCACAGGAGAATCGATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS GCA 72 bp GAACCATCGATTCTCCTGTGGGGCCTCGCCGCAGGGTaGTGCTCCAGCCCCTACTCCCGCCCTCGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: EPSILLWGLAAG*CSSPYSRPRQL
Trigger: CAGCTGCCGAGGGCGGGAGTAGGGGCTGGAGCAGCACCCTGCGGCGAGGCCCCACAGGAGAATCGATGGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS CCA 72 bp CGATCTGAGCCGACAGGCGCTCGCAGTCCGCACCGATaGCCACGTGGTCATGGTCCGTCTGCAGGGCAGCGG +
Preference number: 6 (lower is better)
Translates to: RSEPTGARSPHR*PRGHGPSAGQR
Trigger: CCGCTGCCCTGCAGACGGACCATGACCACGTGGCCATCGGTGCGGACTGCGAGCGCCTGTCGGCTCAGATCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339217.8
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
ENST00000440819.5
ENST00000458442.1
ENST00000465111.5
ENST00000465433.5
ENST00000487164.5
CDS CCA 72 bp GCGGGAGCCTCGCACACACGGGGAGCCACTGCGGACTaGTTGGCGAGTGTCTGTCTCTCACCCGGCCCAGAG +
Preference number: 6 (lower is better)
Translates to: AGASHTRGATAD*LASVCLSPGPE
Trigger: CTCTGGGCCGGGTGAGAGACAGACACTCGCCAACCAGTCCGCAGTGGCTCCCCGTGTGTGCGAGGCTCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS CCA 72 bp TCCCCCAGTTACTGCCCGGGGGTCCGACTCCGTGGGTaGGTGGCAGCTCGCCTCCGAAAGTCTGGCAGCACC +
Preference number: 6 (lower is better)
Translates to: SPSYCPGVRLRG*VAARLRKSGST
Trigger: GGTGCTGCCAGACTTTCGGAGGCGAGCTGCCACCCACCCACGGAGTCGGACCCCCGGGCAGTAACTGGGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475792.1
CDS GCA 72 bp ACCGGTCACATTTCCACACCAGGCCCGGCAACTCAGTaGTCCCCAAGGGCGCTGAGCCGCCACCGAGGCCCT +
Preference number: 6 (lower is better)
Translates to: TGHISTPGPATQ*SPRALSRHRGP
Trigger: AGGGCCTCGGTGGCGGCTCAGCGCCCTTGGGGAGCACTGAGTTGCCGGGCCTGGTGTGGAAATGTGACCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465111.5
CDS GCA 72 bp CGGGGGCCTCTGCCGAGGCTGCGTGGGCAAGGCCCCTaGCTGCAAAGTCAGCTACCAGGGAGCAGATTCTGG +
Preference number: 6 (lower is better)
Translates to: RGPLPRLRGQGP*LQSQLPGSRFW
Trigger: CCAGAATCTGCTCCCTGGTAGCTGACTTTGCAGGCAGGGGCCTTGCCCACGCAGCCTCGGCAGAGGCCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475792.1
CDS CCA 72 bp TGCAGGTGTGAGCGCGCGGTAGCTGGACGTGGCGTCTaGAAGGGGCCATTGCTGGGGTTCGCGAAGTGCGGG +
Preference number: 6 (lower is better)
Translates to: CRCERAVAGRGV*KGPLLGFAKCG
Trigger: CCCGCACTTCGCGAACCCCAGCAATGGCCCCTTCCAGACGCCACGTCCAGCTACCGCGCGCTCACACCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475792.1
CDS CAA 72 bp TCCAGCCTCCGGGCGATCCGCGCAATCTCCTCTTCCTaGCCCATCATCGCCTCAGGAGCAGCGACCCCCGCG +
Preference number: 6 (lower is better)
Translates to: SSLRAIRAISSS*PIIASGAATPA
Trigger: CGCGGGGGTCGCTGCTCCTGAGGCGATGATGGGCAAGGAAGAGGAGATTGCGCGGATCGCCCGGAGGCTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339217.8
ENST00000343484.10
ENST00000395053.7
ENST00000476113.1
ENST00000487164.5
CDS CAA 72 bp GGAGCCTCGCACACACGGGGAGCCACTGCGGACTGGTaGGCGAGTGTCTGTCTCTCACCCGGCCCAGAGGCA +
Preference number: 6 (lower is better)
Translates to: GASHTRGATADW*ASVCLSPGPEA
Trigger: TGCCTCTGGGCCGGGTGAGAGACAGACACTCGCCAACCAGTCCGCAGTGGCTCCCCGTGTGTGCGAGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS GCA 72 bp GAGTTAAGGGACAGGGAAGGGTGCGGAGCCTGTGACTaGGGGCGAGGGAGGGGTCTGAGTCCAGAGCGGGTG +
Preference number: 6 (lower is better)
Translates to: ELRDREGCGACD*GRGRGLSPERV
Trigger: CACCCGCTCTGGACTCAGACCCCTCCCTCGCCCGCAGTCACAGGCTCCGCACCCTTCCCTGTCCCTTAACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415602.5
CDS GCA 72 bp GTCAACGGAGGACGTGGGCCGGGGAGGGCCCAAGGCTaGAGCACATCTACACGAGGGGTCAGCAGAACTGCG +
Preference number: 6 (lower is better)
Translates to: VNGGRGPGRAQG*STSTRGVSRTA
Trigger: CGCAGTTCTGCTGACCCCTCGTGTAGATGTGCTGCAGCCTTGGGCCCTCCCCGGCCCACGTCCTCCGTTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461072.5
ENST00000475236.1
CDS CCA 72 bp GAGCCTCGCACACACGGGGAGCCACTGCGGACTGGTTaGCGAGTGTCTGTCTCTCACCCGGCCCAGAGGCAA +
Preference number: 6 (lower is better)
Translates to: EPRTHGEPLRTG*RVSVSHPAQRQ
Trigger: TTGCCTCTGGGCCGGGTGAGAGACAGACACTCGCCAACCAGTCCGCAGTGGCTCCCCGTGTGTGCGAGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS CCA 72 bp CAGAGGCTGAGACACCCCACCTCCAGAGAATGGAGCTaGGAGGGGCAGCCTGAGCCTGCTCACCCACCTTCC +
Preference number: 6 (lower is better)
Translates to: QRLRHPTSREWS*EGQPEPAHPPS
Trigger: GGAAGGTGGGTGAGCAGGCTCAGGCTGCCCCTCCCAGCTCCATTCTCTGGAGGTGGGGTGTCTCAGCCTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461072.5
ENST00000475236.1
CDS CAA 72 bp GTCTGCAGGGCAGCGGTCAGCATCTCGCGGCACTTGTaGCGCACGGCATCACAGGTGACAGGCACCGGAGGA +
Preference number: 6 (lower is better)
Translates to: VCRAAVSISRHL*RTASQVTGTGG
Trigger: TCCTCCGGTGCCTGTCACCTGTGATGCCGTGCGCAACAAGTGCCGCGAGATGCTGACCGCTGCCCTGCAGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339217.8
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
ENST00000440819.5
ENST00000458442.1
ENST00000465111.5
ENST00000487164.5
CDS CAA 72 bp TCCGTCTGCAGGGCAGCGGTCAGCATCTCGCGGCACTaGTTGCGCACGGCATCACAGGTGACAGGCACCGGA +
Preference number: 6 (lower is better)
Translates to: SVCRAAVSISRH*LRTASQVTGTG
Trigger: TCCGGTGCCTGTCACCTGTGATGCCGTGCGCAACAAGTGCCGCGAGATGCTGACCGCTGCCCTGCAGACGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339217.8
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
ENST00000440819.5
ENST00000458442.1
ENST00000465111.5
ENST00000487164.5
CDS CCA 72 bp CAGAGGCTGACAGCATCAGAACCATCGATTCTCCTGTaGGGCCTCGCCGCAGGGTGCTGCTCCAGCCCCTAC +
Preference number: 6 (lower is better)
Translates to: QRLTASEPSILL*GLAAGCCSSPY
Trigger: GTAGGGGCTGGAGCAGCACCCTGCGGCGAGGCCCCACAGGAGAATCGATGGTTCTGATGCTGTCAGCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS CCA 72 bp CTAGGCCCCACAAGCAGACAGAATCAGCCCTTCAGCTaGTCCGGGGGCCCTCCTGAGGTGAGACAGCCTGAC +
Preference number: 6 (lower is better)
Translates to: LGPTSRQNQPFS*SGGPPEVRQPD
Trigger: GTCAGGCTGTCTCACCTCAGGAGGGCCCCCGGACCAGCTGAAGGGCTGATTCTGTCTGCTTGTGGGGCCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395053.7
ENST00000465111.5
ENST00000487164.5
CDS CCA 72 bp ACTCCGTGGGTGGGTGGCAGCTCGCCTCCGAAAGTCTaGCAGCACCGGCCCTCATCAGCAGCCCTTTCTTTC +
Preference number: 6 (lower is better)
Translates to: TPWVGGSSPPKV*QHRPSSAALSF
Trigger: GAAAGAAAGGGCTGCTGATGAGGGCCGGTGCTGCCAGACTTTCGGAGGCGAGCTGCCACCCACCCACGGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475792.1
CDS CAA 90 bp GCCAGTGCAATGACCTCCTCATCCGAGCTCTGCTTCCGAAGGGCGTaGACAGACATCCCGACTCGGGTGGACTGGAGCAGGTGCAGCGTG +
Preference number: 6 (lower is better)
Translates to: ASAMTSSSELCFRRA*TDIPTRVDWSRCSV
Trigger: CACGCTGCACCTGCTCCAGTCCACCCGAGTCGGGATGTCTGTCAACGCCCTTCGGAAGCAGAGCTCGGATGAGGAGGTCATTGCACTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339217.8
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
ENST00000415602.5
ENST00000440819.5
ENST00000458442.1
ENST00000465111.5
ENST00000470559.5
ENST00000487164.5
CDS CAA 90 bp TCATGGTCCGTCTGCAGGGCAGCGGTCAGCATCTCGCGGCACTTGTaGCGCACGGCATCACAGGTGACAGGCACCGGAGGAAATGTGGTG +
Preference number: 6 (lower is better)
Translates to: SWSVCRAAVSISRHL*RTASQVTGTGGNVV
Trigger: CACCACATTTCCTCCGGTGCCTGTCACCTGTGATGCCGTGCGCAACAAGTGCCGCGAGATGCTGACCGCTGCCCTGCAGACGGACCATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339217.8
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
ENST00000440819.5
ENST00000458442.1
ENST00000465111.5
ENST00000487164.5
CDS CAA 90 bp TGGTCATGGTCCGTCTGCAGGGCAGCGGTCAGCATCTCGCGGCACTaGTTGCGCACGGCATCACAGGTGACAGGCACCGGAGGAAATGTG +
Preference number: 6 (lower is better)
Translates to: WSWSVCRAAVSISRH*LRTASQVTGTGGNV
Trigger: CACATTTCCTCCGGTGCCTGTCACCTGTGATGCCGTGCGCAACAAGTGCCGCGAGATGCTGACCGCTGCCCTGCAGACGGACCATGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339217.8
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
ENST00000440819.5
ENST00000458442.1
ENST00000465111.5
ENST00000487164.5
CDS TCA 72 bp CCCACAGCCCCTACCCAAAGGATATATTCCTCGATCTaGGCCGACAGGCGCTCGCAGTCCGCACCGATGGCC +
Preference number: 6 (lower is better)
Translates to: PTAPTQRIYSSI*ADRRSQSAPMA
Trigger: GGCCATCGGTGCGGACTGCGAGCGCCTGTCGGCTCAGATCGAGGAATATATCCTTTGGGTAGGGGCTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395053.7
ENST00000465111.5
ENST00000487164.5
CDS TCA 72 bp CTACACGAGGGGTCAGCAGAACTGCGAGAAAGGGGGTaGGGCCTCCAGCCTTGTGGCCACATGAGATCCCCC +
Preference number: 6 (lower is better)
Translates to: LHEGSAELRERG*GLQPCGHMRSP
Trigger: GGGGGATCTCATGTGGCCACAAGGCTGGAGGCCTCACCCCCTTTCTCGCAGTTCTGCTGACCCCTCGTGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461072.5
ENST00000475236.1
CDS GCA 72 bp AGAGGCTCCAGCGCCCAGACACTCCCAGAGGAGGCTTaGCCGACCTCCTGGCTCTTATATAAGCACACCGGC +
Preference number: 6 (lower is better)
Translates to: RGSSAQTLPEEA*PTSWLLYKHTG
Trigger: GCCGGTGTGCTTATATAAGAGCCAGGAGGTCGGGCAAGCCTCCTCTGGGAGTGTCTGGGCGCTGGAGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440819.5
CDS GCA 72 bp CAAGCAGGCCAGCACCCCTCGCCTGGACTGTTCCAATaGACCTCGTTCTCTCCGCCTTGTCTCCCCACCCAA +
Preference number: 6 (lower is better)
Translates to: QAGQHPSPGLFQ*TSFSPPCLPTQ
Trigger: TTGGGTGGGGAGACAAGGCGGAGAGAACGAGGTGCATTGGAACAGTCCAGGCGAGGGGTGCTGGCCTGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465111.5
CDS CCA 72 bp TCTGAGTTGCCCCCAAGCAGGCCAGCACCCCTCGCCTaGACTGTTCCAATGCACCTCGTTCTCTCCGCCTTG +
Preference number: 6 (lower is better)
Translates to: SELPPSRPAPLA*TVPMHLVLSAL
Trigger: CAAGGCGGAGAGAACGAGGTGCATTGGAACAGTCCAGGCGAGGGGTGCTGGCCTGCTTGGGGGCAACTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465111.5
CDS CCA 72 bp AGAACTGCGAGAAAGGGGGTGAGGCCTCCAGCCTTGTaGCCACATGAGATCCCCCAGAGTGGAAGGCCGCAC +
Preference number: 6 (lower is better)
Translates to: RTARKGVRPPAL*PHEIPQSGRPH
Trigger: GTGCGGCCTTCCACTCTGGGGGATCTCATGTGGCCACAAGGCTGGAGGCCTCACCCCCTTTCTCGCAGTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000461072.5
ENST00000475236.1
CDS CAA 72 bp TCCATGGCTCCCTCCGCGCTCTTCTTGGTCACCATCTaGTCCAGCCTCCGGGCGATCCGCGCAATCTCCTCT +
Preference number: 6 (lower is better)
Translates to: SMAPSALFLVTI*SSLRAIRAISS
Trigger: AGAGGAGATTGCGCGGATCGCCCGGAGGCTGGACAAGATGGTGACCAAGAAGAGCGCGGAGGGAGCCATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343484.10
ENST00000395053.7
ENST00000487164.5
CDS CAA 72 bp GCTCAGGGCCGCCAGACGCTCCCGGGCCCTCAGAATTaGCACCCAGAGGCTGACAGCATCAGAACCATCGAT +
Preference number: 6 (lower is better)
Translates to: AQGRQTLPGPQN*HPEADSIRTID
Trigger: ATCGATGGTTCTGATGCTGTCAGCCTCTGGGTGCAAATTCTGAGGGCCCGGGAGCGTCTGGCGGCCCTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS CAA 72 bp AGCAGAACTGCGAGAAAGGGGGTGAGGCCTCCAGCCTaGTGGCCACATGAGATCCCCCAGAGTGGAAGGCCG +
Preference number: 6 (lower is better)
Translates to: SRTARKGVRPPA*WPHEIPQSGRP
Trigger: CGGCCTTCCACTCTGGGGGATCTCATGTGGCCACAAGGCTGGAGGCCTCACCCCCTTTCTCGCAGTTCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000461072.5
ENST00000475236.1
CDS CAA 90 bp CAGCAAGCTGCTCAGGGCCGCCAGACGCTCCCGGGCCCTCAGAATTaGCACCCAGAGGCTGACAGCATCAGAACCATCGATTCTCCTGTG +
Preference number: 6 (lower is better)
Translates to: QQAAQGRQTLPGPQN*HPEADSIRTIDSPV
Trigger: CACAGGAGAATCGATGGTTCTGATGCTGTCAGCCTCTGGGTGCAAATTCTGAGGGCCCGGGAGCGTCTGGCGGCCCTGAGCAGCTTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS TCA 72 bp GACGCTCCCGGGCCCTCAGAATTTGCACCCAGAGGCTaGCAGCATCAGAACCATCGATTCTCCTGTGGGGCC +
Preference number: 6 (lower is better)
Translates to: DAPGPSEFAPRG*QHQNHRFSCGA
Trigger: GGCCCCACAGGAGAATCGATGGTTCTGATGCTGTCAGCCTCTGGGTGCAAATTCTGAGGGCCCGGGAGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS GCA 72 bp CTCAGGGCCGCCAGACGCTCCCGGGCCCTCAGAATTTaGACCCAGAGGCTGACAGCATCAGAACCATCGATT +
Preference number: 6 (lower is better)
Translates to: LRAARRSRALRI*TQRLTASEPSI
Trigger: AATCGATGGTTCTGATGCTGTCAGCCTCTGGGTGCAAATTCTGAGGGCCCGGGAGCGTCTGGCGGCCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS CCA 72 bp CTGGCCATCTCCTCTGAGGTCATCACAGCGATCTGCTaGGGTGTTATGGCCCCACACAGCACATTCCGCCGC +
Preference number: 6 (lower is better)
Translates to: LAISSEVITAIC*GVMAPHSTFRR
Trigger: GCGGCGGAATGTGCTGTGTGGGGCCATAACACCCCAGCAGATCGCTGTGATGACCTCAGAGGAGATGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339217.8
ENST00000343484.10
ENST00000361317.6
ENST00000440819.5
ENST00000458442.1
ENST00000465111.5
ENST00000475236.1
ENST00000477783.5
CDS CAA 72 bp ATGACCTCCTCATCCGAGCTCTGCTTCCGAAGGGCGTaGACAGACATCCCGACTCGGGTGGACTGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: MTSSSELCFRRA*TDIPTRVDWSR
Trigger: CCTGCTCCAGTCCACCCGAGTCGGGATGTCTGTCAACGCCCTTCGGAAGCAGAGCTCGGATGAGGAGGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339217.8
ENST00000343484.10
ENST00000361317.6
ENST00000395053.7
ENST00000415602.5
ENST00000440819.5
ENST00000458442.1
ENST00000465111.5
ENST00000470559.5
ENST00000487164.5
CDS CAA 72 bp GAGGGTGACAAACGCGCGCTCTTCTTGGTCACCATCTaGTCCAGCCTCCGGGCGATCCGCGCAATCTCCTCT +
Preference number: 6 (lower is better)
Translates to: EGDKRALFLVTI*SSLRAIRAISS
Trigger: AGAGGAGATTGCGCGGATCGCCCGGAGGCTGGACAAGATGGTGACCAAGAAGAGCGCGCGTTTGTCACCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339217.8
ENST00000476113.1
CDS CCA 72 bp GCCCAGACACTCCCAGAGGAGGCTTGCCCGACCTCCTaGCTCTTATATAAGCACACCGGCTCTTTTCGGAGG +
Preference number: 6 (lower is better)
Translates to: AQTLPEEACPTS*LLYKHTGSFRR
Trigger: CCTCCGAAAAGAGCCGGTGTGCTTATATAAGAGCCAGGAGGTCGGGCAAGCCTCCTCTGGGAGTGTCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440819.5
CDS CCA 72 bp AAGTCCTCACACACAGCCTCCTCCAAAGTCTCGCTGTaGCCGCAAGACAACAGAGGCCCAGGCCGCAGTGAA +
Preference number: 6 (lower is better)
Translates to: KSSHTASSKVSL*PQDNRGPGRSE
Trigger: TTCACTGCGGCCTGGGCCTCTGTTGTCTTGCGGCCACAGCGAGACTTTGGAGGAGGCTGTGTGTGAGGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440819.5
CDS CCA 72 bp TCACTGGCCATCTCTGAGGTCATCACAGCGATCTGCTaGGGTGTTATGGCCCCACACAGCACATTCCGCCGC +
Preference number: 6 (lower is better)
Translates to: SLAISEVITAIC*GVMAPHSTFRR
Trigger: GCGGCGGAATGTGCTGTGTGGGGCCATAACACCCCAGCAGATCGCTGTGATGACCTCAGAGATGGCCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465433.5
CDS TCA 72 bp TCCGCCTCACAGGGCTCCCGTCAAGATGATGTCAGCTaGTTCACATCACATGCCGGCTGTTGGGAAGGCAGC +
Preference number: 6 (lower is better)
Translates to: SASQGSRQDDVS*FTSHAGCWEGS
Trigger: GCTGCCTTCCCAACAGCCGGCATGTGATGTGAATCAGCTGACATCATCTTGACGGGAGCCCTGTGAGGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475792.1
CDS GCA 72 bp TCACTGGCCATCTCCTCTGAGGTCATCACAGCGATCTaGTGGGGTGTTATGGCCCCACACAGCACATTCCGC +
Preference number: 6 (lower is better)
Translates to: SLAISSEVITAI*WGVMAPHSTFR
Trigger: GCGGAATGTGCTGTGTGGGGCCATAACACCCCAGCAGATCGCTGTGATGACCTCAGAGGAGATGGCCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339217.8
ENST00000343484.10
ENST00000361317.6
ENST00000440819.5
ENST00000458442.1
ENST00000465111.5
ENST00000475236.1
ENST00000477783.5
CDS GCA 72 bp TCCCTCCTCAGACTCCAAACTGTTGCCGGCGACAAATaGTATGGGAGACGGAGGGTGACAAACGCGCGCTCT +
Preference number: 6 (lower is better)
Translates to: SLLRLQTVAGDK*YGRRRVTNARS
Trigger: AGAGCGCGCGTTTGTCACCCTCCGTCTCCCATAGCATTTGTCGCCGGCAACAGTTTGGAGTCTGAGGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339217.8
CDS GCA 72 bp CCCACATGTTCCTGCACCACAGCAGGGAACCCTTACTaGTCAGTCAAGAAGGGGAGGGGTTCTGCAGCCTCA +
Preference number: 6 (lower is better)
Translates to: PTCSCTTAGNPY*SVKKGRGSAAS
Trigger: TGAGGCTGCAGAACCCCTCCCCTTCTTGACTGAGCAGTAAGGGTTCCCTGCTGTGGTGCAGGAACATGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458442.1
ENST00000465111.5
CDS CCA 72 bp CCCTGCCTGCAAAGTCAGCTACCAGGGAGCAGATTCTaGGCTCTGCACGTTGACCACTGTGTCTCAGTCTCC +
Preference number: 6 (lower is better)
Translates to: PCLQSQLPGSRF*ALHVDHCVSVS
Trigger: GGAGACTGAGACACAGTGGTCAACGTGCAGAGCCCAGAATCTGCTCCCTGGTAGCTGACTTTGCAGGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475792.1
CDS TCA 72 bp TCCGCCTCACAGGGCTCCCGTCAAGATGATGTCAGCTaGTTCACATCACATGCCTCCGGACTTCCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: SASQGSRQDDVS*FTSHASGLPPP
Trigger: TGGAGGAGGAAGTCCGGAGGCATGTGATGTGAATCAGCTGACATCATCTTGACGGGAGCCCTGTGAGGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361317.6
CDS TCA 72 bp AGCCTCCCAGAGCCCAGTTTGGGTCATTCGGGCTTCTaGGTAGAGTTACTTCTTCAAGAGGCCCGCGCACAC +
Preference number: 6 (lower is better)
Translates to: SLPEPSLGHSGF*VELLLQEARAH
Trigger: GTGTGCGCGGGCCTCTTGAAGAAGTAACTCTACTCAGAAGCCCGAATGACCCAAACTGGGCTCTGGGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475792.1
CDS GCA 72 bp GCAAATCCATGGCTCCCTCCTCAGACTCCAAACTGTTaGCGGCGACAAATGCTATGGGAGACGGAGGGTGAC +
Preference number: 6 (lower is better)
Translates to: ANPWLPPQTPNC*RRQMLWETEGD
Trigger: GTCACCCTCCGTCTCCCATAGCATTTGTCGCCGGCAACAGTTTGGAGTCTGAGGAGGGAGCCATGGATTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339217.8
ENST00000415602.5
CDS GCA 72 bp TCATCACTGGCCATCTCTGAGGTCATCACAGCGATCTaGTGGGGTGTTATGGCCCCACACAGCACATTCCGC +
Preference number: 6 (lower is better)
Translates to: SSLAISEVITAI*WGVMAPHSTFR
Trigger: GCGGAATGTGCTGTGTGGGGCCATAACACCCCAGCAGATCGCTGTGATGACCTCAGAGATGGCCAGTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465433.5
CDS GCA 72 bp TGCAAAGTCAGCTACCAGGGAGCAGATTCTGGGCTCTaGACGTTGACCACTGTGTCTCAGTCTCCCCACCTG +
Preference number: 6 (lower is better)
Translates to: CKVSYQGADSGL*TLTTVSQSPHL
Trigger: CAGGTGGGGAGACTGAGACACAGTGGTCAACGTGCAGAGCCCAGAATCTGCTCCCTGGTAGCTGACTTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475792.1
CDS CCA 72 bp AAGAAAATGGGCCCACAGGCAAGACAGGTATCTGGCTaGCCTGTGAAGGAGGATGACAAGGGCTGGGAAGAG +
Preference number: 6 (lower is better)
Translates to: KKMGPQARQVSG*PVKEDDKGWEE
Trigger: CTCTTCCCAGCCCTTGTCATCCTCCTTCACAGGCCAGCCAGATACCTGTCTTGCCTGTGGGCCCATTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476113.1
CDS GCA 72 bp TCCCTCCTCAGACTCCAAACTGTTGCCGGCGACAAATaGTATGGGAGACGGAGGGTGACAAACGCTGTAAGA +
Preference number: 6 (lower is better)
Translates to: SLLRLQTVAGDK*YGRRRVTNAVR
Trigger: TCTTACAGCGTTTGTCACCCTCCGTCTCCCATAGCATTTGTCGCCGGCAACAGTTTGGAGTCTGAGGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415602.5
CDS GCA 72 bp GAAGAAAAGGGGATCCAACCTCAGACTCCAAACTGTTaGCGGCGACAAATGCTATGGGAGACGGAGGGTGAC +
Preference number: 6 (lower is better)
Translates to: EEKGIQPQTPNC*RRQMLWETEGD
Trigger: GTCACCCTCCGTCTCCCATAGCATTTGTCGCCGGCAACAGTTTGGAGTCTGAGGTTGGATCCCCTTTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476113.1
CDS CAA 72 bp TTCGGAGGGTGTCCACATAACTACCCACAACCCAAGTaGCTGCGGGCTAAGTCCTGGCTAAAGAAGGGAGAG +
Preference number: 6 (lower is better)
Translates to: FGGCPHNYPQPK*LRAKSWLKKGE
Trigger: CTCTCCCTTCTTTAGCCAGGACTTAGCCCGCAGCAACTTGGGTTGTGGGTAGTTATGTGGACACCCTCCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440819.5
CDS CAA 90 bp CCGGCTCTTTTCGGAGGGTGTCCACATAACTACCCACAACCCAAGTaGCTGCGGGCTAAGTCCTGGCTAAAGAAGGGAGAGAATTTATTA +
Preference number: 6 (lower is better)
Translates to: PALFGGCPHNYPQPK*LRAKSWLKKGENLL
Trigger: TAATAAATTCTCTCCCTTCTTTAGCCAGGACTTAGCCCGCAGCAACTTGGGTTGTGGGTAGTTATGTGGACACCCTCCGAAAAGAGCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440819.5