Pregenerated sensors for TCAP (Homo sapiens)
Ensembl gene IDs: ENSG00000173991Ensembl transcript IDs: ENST00000309889.3, ENST00000578283.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGCTTCTTCTGCCTAGAGCGTTCCAGATTCCCCTCACATTTTCCTaGATCAGGGCCACTCCTCCCAGGCACCTCTTGCCCTCACCAGTA | + |
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Preference number: 1 (lower is better) Translates to: QLLLPRAFQIPLTFS*IRATPPRHLLPSPV Trigger: TACTGGTGAGGGCAAGAGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAATGTGAGGGGAATCTGGAACGCTCTAGGCAGAAGAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| 3UTR-3UTR GCA 90 bp | GATTCCCCTCACATTTTCCTGGATCAGGGCCACTCCTCCCAGGCACCTCTTGCCGAGGGTCCTCAGCTGTaGTGGCCCCCAACTCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: DSPHIFLDQGHSSQAPLAEGPQL*WPPTLH Trigger: GTGGAGAGTTGGGGGCCAGCACAGCTGAGGACCCTC...GGCAAGAGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAATGTGAGGGGAATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| 3UTR-3UTR CCA 90 bp | ATTCCCCTCACATTTTCCTGGATCAGGGCCACTCCTCCCAGGCACCTCTTGCCCCTGCCACCCTCCCTTTaGGAACTCAGGGGGCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: IPLTFSWIRATPPRHLLPLPPSL*ELRGLR Trigger: CCTGAGCCCCCTGAGTTCCCAAAGGGAGGGTGGCAG...GGGCAAGAGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAATGTGAGGGGAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| 3UTR-3UTR CCA 90 bp | TGGATCAGGGCCACTCCTCCCAGGCACCTCTTGCCCTCACCAGTACCTTTTGTCCCTAGCCCCCAACTCTaGGCAAACTACAAAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: WIRATPPRHLLPSPVPFVPSPQL*ANYKAA Trigger: GGCTGCTTTGTAGTTTGCCCAGAGTTGGGGGCTAGG...GACAAAAGGTACTGGTGAGGGCAAGAGGTGCCTGGGAGGAGTGGCCCTGATCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| 3UTR CCA 72 bp | CTGCCTAGAGCGTTCCAGATTCCCCTCACATTTTCCTaGATCAGGGCCACTCCTCCCAGGCACCTCTTGCCC | + |
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Preference number: 3 (lower is better) Translates to: LPRAFQIPLTFS*IRATPPRHLLP Trigger: GGGCAAGAGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAATGTGAGGGGAATCTGGAACGCTCTAGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| 3UTR-3UTR CAA 90 bp | AGCTTCTTCTGCCTAGAGCGTTCCAGATTCCCCTCACATTTTCCTGGATCAGGGCCTCCCAGGCACCTCTaGCCCTCACCAGTACCTTTT | + |
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Preference number: 3 (lower is better) Translates to: SFFCLERSRFPSHFPGSGPPRHL*PSPVPF Trigger: AAAAGGTACTGGTGAGGGCAAGAGGTGCCTGGGAGG...CCCTGATCCAGGAAAATGTGAGGGGAATCTGGAACGCTCTAGGCAGAAGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR TCA 90 bp | TGTGCTGGCCCCCAACTCTCCACCCTTAGTGCCCACTGTCTCTGCCACCCTCCCGTGCACCGGGCTTGCTaGCAGGCACCACAGGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: CAGPQLSTLSAHCLCHPPVHRAC*QAPQGA Trigger: TGCCCCCTGTGGTGCCTGTCAGCAAGCCCGGTGCAC...GGGAGGGTGGCAGAGACAGTGGGCACTAAGGGTGGAGAGTTGGGGGCCAGCACA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR GCA 90 bp | TTTATTGCGGCACTAACAGAGGGTGCTGGGGGCCCCACCATCCTTGCCTCTGCCGCCCACGGCCGAGGATaGCCATCCGCATCATCAGCC | + |
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Preference number: 4 (lower is better) Translates to: FIAALTEGAGGPTILASAAHGRG*PSASSA Trigger: GGCTGATGATGCGGATGGGCATCCTCGGCCGTGGGC...GGCAGAGGCAAGGATGGTGGGGCCCCCAGCACCCTCTGTTAGTGCCGCAATAAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR CCA 90 bp | CATTTTCCTGGATCAGGGCCACTCCTCCCAGGCACCTCTTGCCCTCACCAGTACCGCTGCACCAGCACCTaGCACTGCCCCTGCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: HFPGSGPLLPGTSCPHQYRCTST*HCPCWW Trigger: CCACCAGCAGGGGCAGTGCCAGGTGCTGGTGCAGCG...GTACTGGTGAGGGCAAGAGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR GCA 90 bp | CCTCACATTTTCCTGGATCAGGGCCACTCCTCCCAGGCACCTCTTGCCCTCACCTGGGTGTCCTCCTCATaGAGGGAGCAGCCCTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: PHIFLDQGHSSQAPLALTWVSSS*REQPSS Trigger: CGAGGAGGGCTGCTCCCTGCATGAGGAGGACACCCA...GGTGAGGGCAAGAGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAATGTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR CCA 90 bp | TTTTCCTGGATCAGGGCCACTCCTCCCAGGCACCTCTTGCCCTCACCAGTACCTTGGCGGTCCACACACTaGCCACCCAGGGCTGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: FSWIRATPPRHLLPSPVPWRSTH*PPRAVS Trigger: GGAGACAGCCCTGGGTGGCCAGTGTGTGGACCGCCA...AGGTACTGGTGAGGGCAAGAGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR CCA 90 bp | CCTCACATTTTCCTGGATCAGGGCCACTCCTCCCAGGCACCTCTTGCCCTCACCCTGCCACCCTCCCTTTaGGAACTCAGGGGGCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: PHIFLDQGHSSQAPLALTLPPSL*ELRGLR Trigger: CCTGAGCCCCCTGAGTTCCCAAAGGGAGGGTGGCAG...GGTGAGGGCAAGAGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAATGTGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR TCA 90 bp | ATTCCCCTCACATTTTCCTGGATCAGGGCCACTCCTCCCAGGCACCTCTTGCCCGGGGCAGCTGCTTTGTaGTCTCAGCCACCTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: IPLTFSWIRATPPRHLLPGAAAL*SQPPPG Trigger: GCCAGGAGGTGGCTGAGATCACAAAGCAGCTGCCCC...GGGCAAGAGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAATGTGAGGGGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR CCA 90 bp | GTTCCAGATTCCCCTCACATTTTCCTGGATCAGGGCCACTCCTCCCAGGCACCTCACGCTCCTCCTTGGTaGCGCCCATCTTGGCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: VPDSPHIFLDQGHSSQAPHAPPW*RPSWQG Trigger: CCCCTGCCAAGATGGGCGCCACCAAGGAGGAGCGTG...AGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAATGTGAGGGGAATCTGGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR CCA 90 bp | CATTTTCCTGGATCAGGGCCACTCCTCCCAGGCACCTCTTGCCCTCACCAGTACCCTCACGCTCCTCCTTaGTGGCGCCCATCTTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: HFPGSGPLLPGTSCPHQYPHAPP*WRPSWQ Trigger: CTGCCAAGATGGGCGCCACCAAGGAGGAGCGTGAGG...GTACTGGTGAGGGCAAGAGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR CCA 90 bp | ATTCCCCTCACATTTTCCTGGATCAGGGCCACTCCTCCCAGGCACCTCTTGCCCGTGCTTCCTGGGACATaGAGCGGGACAGGGAGCGAC | + |
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Preference number: 4 (lower is better) Translates to: IPLTFSWIRATPPRHLLPVLPGT*SGTGSD Trigger: GTCGCTCCCTGTCCCGCTCCATGTCCCAGGAAGCAC...GGGCAAGAGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAATGTGAGGGGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR GCA 90 bp | CTGGATCAGGGCCACTCCTCCCAGGCACCTCTTGCCCTCACCAGTACCTTTTGTCAGATCCTTCCATTCTaGCCAGAAGGCCTCCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: LDQGHSSQAPLALTSTFCQILPF*PEGLPA Trigger: CGCCGGGAGGCCTTCTGGGCAGAATGGAAGGATCTG...ACAAAAGGTACTGGTGAGGGCAAGAGGTGCCTGGGAGGAGTGGCCCTGATCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR GCA 90 bp | CCTCACATTTTCCTGGATCAGGGCCACTCCTCCCAGGCACCTCTTGCCCTCACCACCACAGGGGGCAGCTaGTTTGTGATCTCAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: PHIFLDQGHSSQAPLALTTTGGS*FVISAT Trigger: GGTGGCTGAGATCACAAAGCAGCTGCCCCCTGTGGT...GGTGAGGGCAAGAGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAATGTGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR GCA 90 bp | GTTCCAGATTCCCCTCACATTTTCCTGGATCAGGGCCACTCCTCCCAGGCACCTCAGGGAGCGACGAAGTaGACCGGGCTTGCTGACAGG | + |
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Preference number: 4 (lower is better) Translates to: VPDSPHIFLDQGHSSQAPQGATK*TGLADR Trigger: CCTGTCAGCAAGCCCGGTGCACTTCGTCGCTCCCTG...AGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAATGTGAGGGGAATCTGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR GCA 90 bp | GTTCCAGATTCCCCTCACATTTTCCTGGATCAGGGCCACTCCTCCCAGGCACCTGAGGGTCCTCAGCTGTaGTGGCCCCCAACTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: VPDSPHIFLDQGHSSQAPEGPQL*WPPTLH Trigger: GTGGAGAGTTGGGGGCCAGCACAGCTGAGGACCCTC...AGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAATGTGAGGGGAATCTGGAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR GCA 90 bp | TTTTCCTGGATCAGGGCCACTCCTCCCAGGCACCTCTTGCCCTCACCAGTACCTGGGCCCCACCATCCTTaGCTCTGCCCTTTTCACCTC | + |
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Preference number: 4 (lower is better) Translates to: FSWIRATPPRHLLPSPVPGPHHP*LCPFHL Trigger: GAGGTGAAAAGGGCAGAGGCAAGGATGGTGGGGCCC...AGGTACTGGTGAGGGCAAGAGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR GCA 90 bp | CCCCCTCCCTCCCAGCTTCTTCTGCCTAGAGCGTTCCAGATTCCCCTCACATTTGGCACTAACAGAGGGTaGTGGGGGCCCCACCATCCT | + |
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Preference number: 4 (lower is better) Translates to: PPPSQLLLPRAFQIPLTFGTNRG*WGPHHP Trigger: AGGATGGTGGGGCCCCCAGCACCCTCTGTTAGTGCC...AAATGTGAGGGGAATCTGGAACGCTCTAGGCAGAAGAAGCTGGGAGGGAGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR CCA 90 bp | GATTCCCCTCACATTTTCCTGGATCAGGGCCACTCCTCCCAGGCACCTCTTGCCCCTCCTCGGGCCGTGTaGACAGTGTCAGATCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: DSPHIFLDQGHSSQAPLAPPRAV*TVSDPS Trigger: GGAAGGATCTGACACTGTCCACACGGCCCGAGGAGG...GGCAAGAGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAATGTGAGGGGAATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR CCA 90 bp | CTCACATTTTCCTGGATCAGGGCCACTCCTCCCAGGCACCTCTTGCCCTCACCAGCTCCTGAAGCTGGATaGGGGTGTCCTCACGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LTFSWIRATPPRHLLPSPAPEAG*GCPHAP Trigger: AGGAGCGTGAGGACACCCCCATCCAGCTTCAGGAGC...TGGTGAGGGCAAGAGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAATGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR CCA 90 bp | TTTATTGCGGCACTAACAGAGGGTGCTGGGGGCCCCACCATCCTTGCCTCTGCCCCCCTCACATTTTCCTaGATCAGGGCCACTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: FIAALTEGAGGPTILASAPLTFS*IRATPP Trigger: GGGAGGAGTGGCCCTGATCCAGGAAAATGTGAGGGG...GGCAGAGGCAAGGATGGTGGGGCCCCCAGCACCCTCTGTTAGTGCCGCAATAAA 60% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR TCA 90 bp | GATTCCCCTCACATTTTCCTGGATCAGGGCCACTCCTCCCAGGCACCTCTTGCCCTCGCAGCTCAGCTCTaGGGTAGCCATGATCACTCC | + |
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Preference number: 4 (lower is better) Translates to: DSPHIFLDQGHSSQAPLALAAQL*GSHDHS Trigger: GGAGTGATCATGGCTACCTCAGAGCTGAGCTGCGAG...GGCAAGAGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAATGTGAGGGGAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR GCA 90 bp | CTTCTTCTGCCTAGAGCGTTCCAGATTCCCCTCACATTTTCCTGGATCAGGGCCGGCAGCTGGTACTCCTaGAGCCCACGGCCGAGGATG | + |
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Preference number: 4 (lower is better) Translates to: LLLPRAFQIPLTFSWIRAGSWYS*SPRPRM Trigger: CATCCTCGGCCGTGGGCTGCAGGAGTACCAGCTGCC...GGCCCTGATCCAGGAAAATGTGAGGGGAATCTGGAACGCTCTAGGCAGAAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR GCA 90 bp | CCTCACATTTTCCTGGATCAGGGCCACTCCTCCCAGGCACCTCTTGCCCTCACCCTCCCAGGCACCTCTTaGCCTCACCAGTACCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: PHIFLDQGHSSQAPLALTLPGTS*PHQYLL Trigger: CAAAAGGTACTGGTGAGGGCAAGAGGTGCCTGGGAG...GGTGAGGGCAAGAGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAATGTGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR CCA 90 bp | GTTCCAGATTCCCCTCACATTTTCCTGGATCAGGGCCACTCCTCCCAGGCACCTACTAACAGAGGGTGCTaGGGGCCCCACCATCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: VPDSPHIFLDQGHSSQAPTNRGC*GPHHPC Trigger: GCAAGGATGGTGGGGCCCCCAGCACCCTCTGTTAGT...AGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAATGTGAGGGGAATCTGGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR GCA 90 bp | GTTCCAGATTCCCCTCACATTTTCCTGGATCAGGGCCACTCCTCCCAGGCACCTAGTGCCCACTGTCTCTaGCACCCTCCCTTTGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: VPDSPHIFLDQGHSSQAPSAHCL*HPPFGN Trigger: GTTCCCAAAGGGAGGGTGGCAGAGACAGTGGGCACT...AGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAATGTGAGGGGAATCTGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR CCA 90 bp | TTTTCCTGGATCAGGGCCACTCCTCCCAGGCACCTCTTGCCCTCACCAGTACCTCCTAGCCCCCAACTCTaGGCAAACTACAAAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: FSWIRATPPRHLLPSPVPPSPQL*ANYKAA Trigger: GGCTGCTTTGTAGTTTGCCCAGAGTTGGGGGCTAGG...AGGTACTGGTGAGGGCAAGAGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR CCA 90 bp | CTTCTTCTGCCTAGAGCGTTCCAGATTCCCCTCACATTTTCCTGGATCAGGGCCATCTCAGCCACCTCCTaGCGGTCCACACACTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LLLPRAFQIPLTFSWIRAISATS*RSTHWP Trigger: TGGCCAGTGTGTGGACCGCCAGGAGGTGGCTGAGAT...GGCCCTGATCCAGGAAAATGTGAGGGGAATCTGGAACGCTCTAGGCAGAAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR TCA 90 bp | AGCTTCTTCTGCCTAGAGCGTTCCAGATTCCCCTCACATTTTCCTGGATCAGGGCCATCTTGGCAGGGGTaGAGATGGGCAGCGGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: SFFCLERSRFPSHFPGSGPSWQG*RWAAAV Trigger: TACTGCCGCTGCCCATCTTCACCCCTGCCAAGATGG...CCCTGATCCAGGAAAATGTGAGGGGAATCTGGAACGCTCTAGGCAGAAGAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR CCA 90 bp | AGCTTCTTCTGCCTAGAGCGTTCCAGATTCCCCTCACATTTTCCTGGATCAGGGCCTCTCTGTGCTTCCTaGGACATGGAGCGGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: SFFCLERSRFPSHFPGSGPLCAS*DMERDR Trigger: CCTGTCCCGCTCCATGTCCCAGGAAGCACAGAGAGG...CCCTGATCCAGGAAAATGTGAGGGGAATCTGGAACGCTCTAGGCAGAAGAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS GCA 90 bp | CCCGCTGGTAGGGCAGCTGGTACTCCTGCAGCCCACGGCCGAGGATaGCCATCCGCATCATCAGCCAGGGCGAGCGCTGCACCAGCACCT | + |
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Preference number: 5 (lower is better) Translates to: PAGRAAGTPAAHGRG*PSASSARASAAPAP Trigger: AGGTGCTGGTGCAGCGCTCGCCCTGGCTGATGATGCGGATGGGCATCCTCGGCCGTGGGCTGCAGGAGTACCAGCTGCCCTACCAGCGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS TCA 90 bp | GGGTGTCCTCACGCTCCTCCTTGGTGGCGCCCATCTTGGCAGGGGTaGAGATGGGCAGCGGCAGTACCCGCTGGTAGGGCAGCTGGCACT | + |
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Preference number: 5 (lower is better) Translates to: GCPHAPPWWRPSWQG*RWAAAVPAGRAAGT Trigger: AGTGCCAGCTGCCCTACCAGCGGGTACTGCCGCTGCCCATCTTCACCCCTGCCAAGATGGGCGCCACCAAGGAGGAGCGTGAGGACACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578283.1 |
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| CDS CCA 90 bp | ACAGGCACCACAGGGGGCAGCTGCTTTGTGATCTCAGCCACCTCCTaGCGGTCCACACACTGGCCACCCAGGGCTGTCTCCAGCGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: TGTTGGSCFVISATS*RSTHWPPRAVSSAS Trigger: GCTGGCGCTGGAGACAGCCCTGGGTGGCCAGTGTGTGGACCGCCAGGAGGTGGCTGAGATCACAAAGCAGCTGCCCCCTGTGGTGCCTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309889.3 ENST00000578283.1 |
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| CDS TCA 90 bp | GGGTGTCCTCACGCTCCTCCTTGGTGGCGCCCATCTTGGCAGGGGTaGAGATGGGCAGCGGCAGTACCCGCTGGTAGGGCAGCTGGTACT | + |
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Preference number: 5 (lower is better) Translates to: GCPHAPPWWRPSWQG*RWAAAVPAGRAAGT Trigger: AGTACCAGCTGCCCTACCAGCGGGTACTGCCGCTGCCCATCTTCACCCCTGCCAAGATGGGCGCCACCAAGGAGGAGCGTGAGGACACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS GCA 90 bp | GCAGCCCTCCTCGGGCCGTGTGGACAGTGTCAGATCCTTCCATTCTaGCCAGAAGGCCTCCCGGCGCTCACAGTTCTCCTCCGACACCTC | + |
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Preference number: 5 (lower is better) Translates to: AALLGPCGQCQILPF*PEGLPALTVLLRHL Trigger: GAGGTGTCGGAGGAGAACTGTGAGCGCCGGGAGGCCTTCTGGGCAGAATGGAAGGATCTGACACTGTCCACACGGCCCGAGGAGGGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000309889.3 ENST00000578283.1 |
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| CDS GCA 90 bp | CGACGAAGTGCACCGGGCTTGCTGACAGGCACCACAGGGGGCAGCTaGTTTGTGATCTCAGCCACCTCCTGGCGGTCCACACACTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: RRSAPGLLTGTTGGS*FVISATSWRSTHWP Trigger: TGGCCAGTGTGTGGACCGCCAGGAGGTGGCTGAGATCACAAAGCAGCTGCCCCCTGTGGTGCCTGTCAGCAAGCCCGGTGCACTTCGTCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309889.3 ENST00000578283.1 |
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| CDS GCA 90 bp | TCTCTGTGCTTCCTGGGACATGGAGCGGGACAGGGAGCGACGAAGTaGACCGGGCTTGCTGACAGGCACCACAGGGGGCAGCTGCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: SLCFLGHGAGQGATK*TGLADRHHRGQLLC Trigger: ACAAAGCAGCTGCCCCCTGTGGTGCCTGTCAGCAAGCCCGGTGCACTTCGTCGCTCCCTGTCCCGCTCCATGTCCCAGGAAGCACAGAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309889.3 ENST00000578283.1 |
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| CDS-3UTR CAA 90 bp | CTCACATTTTCCTGGATCAGGGCCACTCCTCCCAGGCACCTCTTGCCCTCACCATTGGTGGCGCCCATCTaGGCAGGGGTGAAGATGGGC | + |
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Preference number: 5 (lower is better) Translates to: LTFSWIRATPPRHLLPSPLVAPI*AGVKMG Trigger: GCCCATCTTCACCCCTGCCAAGATGGGCGCCACCAA...TGGTGAGGGCAAGAGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAATGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR CAA 90 bp | CTCACATTTTCCTGGATCAGGGCCACTCCTCCCAGGCACCTCTTGCCCTCACCACCTCACCAGTACCTTTaGTCCCTTCTCCTGGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: LTFSWIRATPPRHLLPSPPHQYL*SLLLGL Trigger: CAGCCCCAGGAGAAGGGACAAAAGGTACTGGTGAGG...TGGTGAGGGCAAGAGGTGCCTGGGAGGAGTGGCCCTGATCCAGGAAAATGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR CAA 90 bp | CTGGATCAGGGCCACTCCTCCCAGGCACCTCTTGCCCTCACCAGTACCTTTTGTCCTCCCAGGCACCTCTaGCCCTCACCAGTACCTTTT | + |
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Preference number: 5 (lower is better) Translates to: LDQGHSSQAPLALTSTFCPPRHL*PSPVPF Trigger: AAAAGGTACTGGTGAGGGCAAGAGGTGCCTGGGAGG...ACAAAAGGTACTGGTGAGGGCAAGAGGTGCCTGGGAGGAGTGGCCCTGATCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR CAA 90 bp | CTTCTTCTGCCTAGAGCGTTCCAGATTCCCCTCACATTTTCCTGGATCAGGGCCTCCTCACGCTCCTCCTaGGTGGCGCCCATCTTGGCA | + |
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Preference number: 5 (lower is better) Translates to: LLLPRAFQIPLTFSWIRASSRSS*VAPILA Trigger: TGCCAAGATGGGCGCCACCAAGGAGGAGCGTGAGGA...GGCCCTGATCCAGGAAAATGTGAGGGGAATCTGGAACGCTCTAGGCAGAAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS-3UTR CAA 90 bp | AGCTTCTTCTGCCTAGAGCGTTCCAGATTCCCCTCACATTTTCCTGGATCAGGGCGAAGTGCACCGGGCTaGCTGACAGGCACCACAGGG | + |
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Preference number: 5 (lower is better) Translates to: SFFCLERSRFPSHFPGSGRSAPG*LTGTTG Trigger: CCCTGTGGTGCCTGTCAGCAAGCCCGGTGCACTTCG...CCCTGATCCAGGAAAATGTGAGGGGAATCTGGAACGCTCTAGGCAGAAGAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS GCA 72 bp | AGGGCAGCTGGTACTCCTGCAGCCCACGGCCGAGGATaGCCATCCGCATCATCAGCCAGGGCGAGCGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: RAAGTPAAHGRG*PSASSARASAA Trigger: TGCAGCGCTCGCCCTGGCTGATGATGCGGATGGGCATCCTCGGCCGTGGGCTGCAGGAGTACCAGCTGCCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309889.3 |
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| CDS CAA 72 bp | GGGGTGTCCTCACGCTCCTCCTTGGTGGCGCCCATCTaGGCAGGGGTGAAGATGGGCAGCGGCAGTACCCGC | + |
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Preference number: 6 (lower is better) Translates to: GVSSRSSLVAPI*AGVKMGSGSTR Trigger: GCGGGTACTGCCGCTGCCCATCTTCACCCCTGCCAAGATGGGCGCCACCAAGGAGGAGCGTGAGGACACCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000309889.3 ENST00000578283.1 |
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| CDS TCA 72 bp | CACGCTCCTCCTTGGTGGCGCCCATCTTGGCAGGGGTaGAGATGGGCAGCGGCAGTACCCGCTGGTAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: HAPPWWRPSWQG*RWAAAVPAGRA Trigger: TGCCCTACCAGCGGGTACTGCCGCTGCCCATCTTCACCCCTGCCAAGATGGGCGCCACCAAGGAGGAGCGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309889.3 ENST00000578283.1 |
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| CDS GCA 72 bp | TTCCTGGGACATGGAGCGGGACAGGGAGCGACGAAGTaGACCGGGCTTGCTGACAGGCACCACAGGGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: FLGHGAGQGATK*TGLADRHHRGQ Trigger: CTGCCCCCTGTGGTGCCTGTCAGCAAGCCCGGTGCACTTCGTCGCTCCCTGTCCCGCTCCATGTCCCAGGAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309889.3 ENST00000578283.1 |
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| CDS GCA 72 bp | GCACCGGGCTTGCTGACAGGCACCACAGGGGGCAGCTaGTTTGTGATCTCAGCCACCTCCTGGCGGTCCACA | + |
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Preference number: 6 (lower is better) Translates to: APGLLTGTTGGS*FVISATSWRST Trigger: TGTGGACCGCCAGGAGGTGGCTGAGATCACAAAGCAGCTGCCCCCTGTGGTGCCTGTCAGCAAGCCCGGTGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309889.3 ENST00000578283.1 |
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| CDS CCA 72 bp | ACAGGGGGCAGCTGCTTTGTGATCTCAGCCACCTCCTaGCGGTCCACACACTGGCCACCCAGGGCTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: TGGSCFVISATS*RSTHWPPRAVS Trigger: GGAGACAGCCCTGGGTGGCCAGTGTGTGGACCGCCAGGAGGTGGCTGAGATCACAAAGCAGCTGCCCCCTGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309889.3 ENST00000578283.1 |
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| CDS CAA 72 bp | ATGGAGCGGGACAGGGAGCGACGAAGTGCACCGGGCTaGCTGACAGGCACCACAGGGGGCAGCTGCTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: MERDRERRSAPG*LTGTTGGSCFV Trigger: CACAAAGCAGCTGCCCCCTGTGGTGCCTGTCAGCAAGCCCGGTGCACTTCGTCGCTCCCTGTCCCGCTCCAT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309889.3 ENST00000578283.1 |
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| CDS CAA 90 bp | TCCTGGGACATGGAGCGGGACAGGGAGCGACGAAGTGCACCGGGCTaGCTGACAGGCACCACAGGGGGCAGCTGCTTTGTGATCTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SWDMERDRERRSAPG*LTGTTGGSCFVISA Trigger: GGCTGAGATCACAAAGCAGCTGCCCCCTGTGGTGCCTGTCAGCAAGCCCGGTGCACTTCGTCGCTCCCTGTCCCGCTCCATGTCCCAGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309889.3 ENST00000578283.1 |
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