RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TCAIM (Homo sapiens)

Ensembl gene IDs: ENSG00000179152

Ensembl transcript IDs: ENST00000342649.9, ENST00000383746.7, ENST00000396078.7, ENST00000412611.6, ENST00000417237.5, ENST00000417768.1, ENST00000431657.5, ENST00000444602.2, ENST00000462230.5, ENST00000462612.1, ENST00000469246.1, ENST00000494638.5

Found 438 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCTGCTGTGCTAAGCGGCTTAAACTATGCAGCTGGCTACAGCGGTaGGCGATGCCCCAGCTCCTCTGCCACCTGATATCTGAGAGTTGC +
Preference number: 1 (lower is better)
Translates to: FCCAKRLKLCSWLQR*AMPQLLCHLISESC
Trigger: GCAACTCTCAGATATCAGGTGGCAGAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTTAGCACAGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
3UTR CCA 90 bp AGTGTTTCCAAATTCTGCTGTGCTAAGCGGCTTAAACTATGCAGCTaGCTACAGCGGTGGGCGATGCCCCAGCTCCTCTGCCACCTGATA +
Preference number: 1 (lower is better)
Translates to: SVSKFCCAKRLKLCS*LQRWAMPQLLCHLI
Trigger: TATCAGGTGGCAGAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTTAGCACAGCAGAATTTGGAAACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
3UTR GCA 90 bp TTTTTAAGTGTTTCCAAATTCTGCTGTGCTAAGCGGCTTAAACTATaGAGCTGGCTACAGCGGTGGGCGATGCCCCAGCTCCTCTGCCAC +
Preference number: 1 (lower is better)
Translates to: FLSVSKFCCAKRLKL*SWLQRWAMPQLLCH
Trigger: GTGGCAGAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTTAGCACAGCAGAATTTGGAAACACTTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
3UTR GCA 90 bp TTGCTGCCCCCAAAGACACACTTCTTCAGAAGATCACGACCTACTTaGAAGCCCTCTGACCTTCCTTATCTGTCACATGCCAGGGGTGAC +
Preference number: 1 (lower is better)
Translates to: LLPPKTHFFRRSRPT*KPSDLPYLSHARGD
Trigger: GTCACCCCTGGCATGTGACAGATAAGGAAGGTCAGAGGGCTTGCAAGTAGGTCGTGATCTTCTGAAGAAGTGTGTCTTTGGGGGCAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431657.5
3UTR CCA 90 bp AGAGCTAAAAGCACTGAATCCAGAGATCAGGTCTCTCGGCTGTGCTaGGGACACCATCAACCACTTGGGGTTGAATTCTATTGCTATGAA +
Preference number: 1 (lower is better)
Translates to: RAKSTESRDQVSRLC*GHHQPLGVEFYCYE
Trigger: TTCATAGCAATAGAATTCAACCCCAAGTGGTTGATGGTGTCCCCAGCACAGCCGAGAGACCTGATCTCTGGATTCAGTGCTTTTAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
3UTR GCA 90 bp CAGCAAAGGGAAAAGGTGAATAGAGCAGAATCAGGAGAGACCACGTaGAAGTTTCCAGTTGTCATTTCACAGTGGAGTTTTACAGACAGT +
Preference number: 1 (lower is better)
Translates to: QQREKVNRAESGETT*KFPVVISQWSFTDS
Trigger: ACTGTCTGTAAAACTCCACTGTGAAATGACAACTGGAAACTTGCACGTGGTCTCTCCTGATTCTGCTCTATTCACCTTTTCCCTTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
3UTR CCA 90 bp GGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTaGTTGAGAAGAGTGACAAGAAATCCTGAATGGTCTGAACCATTT +
Preference number: 1 (lower is better)
Translates to: GLMTGFQTSVITGRS*LRRVTRNPEWSEPF
Trigger: AAATGGTTCAGACCATTCAGGATTTCTTGTCACTCTTCTCAACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR TCA 90 bp TCTGCTGTGCTAAGCGGCTTAAACTATGCAGCTGGCTACAGCGGTGGGCGATGCCTGGGACCGCAGGCATaGGCCACCACGCCTGGCATA +
Preference number: 2 (lower is better)
Translates to: SAVLSGLNYAAGYSGGRCLGPQA*ATTPGI
Trigger: TATGCCAGGCGTGGTGGCTCATGCCTGCGGTCCCAG...GCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTTAGCACAGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR GCA 90 bp CATCCATTGTTCCTAGCATCACATGGCCCACTGCACTCATGCCAGAACGGTCTGTACAGCGGTGGGCGATaGCCCAGCTCCTCTGCCACC +
Preference number: 2 (lower is better)
Translates to: HPLFLASHGPLHSCQNGLYSGGR*PSSSAT
Trigger: GGTGGCAGAGGAGCTGGGGCATCGCCCACCGCTGTA...CAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAACAATGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
3UTR-3UTR GCA 90 bp CACATGGCCCACTGCACTCATGCCAGAACGGTCTGTAAATATGATTGTACACCCTACAGCGGTGGGCGATaGCCCAGCTCCTCTGCCACC +
Preference number: 2 (lower is better)
Translates to: HMAHCTHARTVCKYDCTPYSGGR*PSSSAT
Trigger: GGTGGCAGAGGAGCTGGGGCATCGCCCACCGCTGTA...GGGTGTACAATCATATTTACAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
3UTR-3UTR CCA 90 bp CTGAATCCAGAGATCAGGTCTCTCGGCTGTGCTGGGGACACCATCAACCACTTGGGCAATGGTGCAATCTaGGCCCACTGCAACCTTGGC +
Preference number: 2 (lower is better)
Translates to: LNPEIRSLGCAGDTINHLGNGAI*AHCNLG
Trigger: GCCAAGGTTGCAGTGGGCCCAGATTGCACCATTGCC...CAAGTGGTTGATGGTGTCCCCAGCACAGCCGAGAGACCTGATCTCTGGATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
3UTR-3UTR CCA 90 bp CATCCATTGTTCCTAGCATCACATGGCCCACTGCACTCATGCCAGAACGGTCTGGGCAATGGTGCAATCTaGGCCCACTGCAACCTTGGC +
Preference number: 2 (lower is better)
Translates to: HPLFLASHGPLHSCQNGLGNGAI*AHCNLG
Trigger: GCCAAGGTTGCAGTGGGCCCAGATTGCACCATTGCC...CAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAACAATGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR GCA 90 bp CCTCAGGCAAACAGAAACATTCCTATCCAGGGGCTCAGAGCTCATTTCCCAGTACTGGGACTACAGGTGTaGCACCATGCCCTGCTGCAT +
Preference number: 2 (lower is better)
Translates to: PQANRNIPIQGLRAHFPVLGLQV*HHALLH
Trigger: ATGCAGCAGGGCATGGTGGCACACCTGTAGTCCCAG...TACTGGGAAATGAGCTCTGAGCCCCTGGATAGGAATGTTTCTGTTTGCCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
3UTR-3UTR CCA 90 bp ACTCTGAGGGGCTTTAACCAGGCCGGGGCTAATGACAGGGTTTCAAACATCAGTGTCTCTCGGCTGTGCTaGGGACACCATCAACCACTT +
Preference number: 2 (lower is better)
Translates to: TLRGFNQAGANDRVSNISVSRLC*GHHQPL
Trigger: AAGTGGTTGATGGTGTCCCCAGCACAGCCGAGAGAC...ACTGATGTTTGAAACCCTGTCATTAGCCCCGGCCTGGTTAAAGCCCCTCAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CCA 90 bp CCCAAGGAAGCTCATCCAAGTCTGGATGTCCAGAGTTTTACTGGGGGTCAGTCAGTATCCATAGGGGATTaGTTCCAGGACCTCCCGTGG +
Preference number: 2 (lower is better)
Translates to: PKEAHPSLDVQSFTGGQSVSIGD*FQDLPW
Trigger: CCACGGGAGGTCCTGGAACCAATCCCCTATGGATAC...TGACTGACCCCCAGTAAAACTCTGGACATCCAGACTTGGATGAGCTTCCTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
3UTR-3UTR TCA 90 bp GGGATTGGTTCCAGGACCTCCCGTGGATACCGAAATCTGCGAATGCTCAAGTCTGGAGCACACATTAACTaGTGTTGTAGGGGAGTGGTC +
Preference number: 2 (lower is better)
Translates to: GIGSRTSRGYRNLRMLKSGAHIN*CCRGVV
Trigger: GACCACTCCCCTACAACATCAGTTAATGTGTGCTCC...AGACTTGAGCATTCGCAGATTTCGGTATCCACGGGAGGTCCTGGAACCAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
3UTR-3UTR TCA 90 bp TCTGCTGTGCTAAGCGGCTTAAACTATGCAGCTGGCTACAGCGGTGGGCGATGCCTGCCACCTGATATCTaGGAGTTGCAATTGATGAGA +
Preference number: 2 (lower is better)
Translates to: SAVLSGLNYAAGYSGGRCLPPDI*ELQLMR
Trigger: TCTCATCAATTGCAACTCTCAGATATCAGGTGGCAG...GCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTTAGCACAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
3UTR-3UTR TCA 90 bp CTGAATCCAGAGATCAGGTCTCTCGGCTGTGCTGGGGACACCATCAACCACTTGAGCTCCTCTGCCACCTaGTATCTGAGAGTTGCAATT +
Preference number: 2 (lower is better)
Translates to: LNPEIRSLGCAGDTINHLSSSAT*YLRVAI
Trigger: AATTGCAACTCTCAGATATCAGGTGGCAGAGGAGCT...CAAGTGGTTGATGGTGTCCCCAGCACAGCCGAGAGACCTGATCTCTGGATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412611.6
3UTR-3UTR CCA 90 bp CTGAATCCAGAGATCAGGTCTCTCGGCTGTGCTGGGGACACCATCAACCACTTGATGAGCCACCACGCCTaGCATATAAAACCTCTCCTA +
Preference number: 2 (lower is better)
Translates to: LNPEIRSLGCAGDTINHLMSHHA*HIKPLL
Trigger: TAGGAGAGGTTTTATATGCCAGGCGTGGTGGCTCAT...CAAGTGGTTGATGGTGTCCCCAGCACAGCCGAGAGACCTGATCTCTGGATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
3UTR-3UTR CCA 90 bp CCTCAGGCAAACAGAAACATTCCTATCCAGGGGCTCAGAGCTCATTTCCCAGTAGTATCCATAGGGGATTaGTTCCAGGACCTCCCGTGG +
Preference number: 2 (lower is better)
Translates to: PQANRNIPIQGLRAHFPVVSIGD*FQDLPW
Trigger: CCACGGGAGGTCCTGGAACCAATCCCCTATGGATAC...TACTGGGAAATGAGCTCTGAGCCCCTGGATAGGAATGTTTCTGTTTGCCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
3UTR-3UTR CCA 90 bp CATTCAGTAGCAAGAGCCCAAAAATGGTGTTCCAAGCCAAGATTCACCTTGTCCGGCAATGGTGCAATCTaGGCCCACTGCAACCTTGGC +
Preference number: 2 (lower is better)
Translates to: HSVARAQKWCSKPRFTLSGNGAI*AHCNLG
Trigger: GCCAAGGTTGCAGTGGGCCCAGATTGCACCATTGCC...GGACAAGGTGAATCTTGGCTTGGAACACCATTTTTGGGCTCTTGCTACTGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
3UTR-3UTR CCA 90 bp CACATGGCCCACTGCACTCATGCCAGAACGGTCTGTAAATATGATTGTACACCCTTCTGTTGCTCAGGCTaGAGGGCAATGGTGCAATCT +
Preference number: 2 (lower is better)
Translates to: HMAHCTHARTVCKYDCTPFCCSG*RAMVQS
Trigger: AGATTGCACCATTGCCCTCCAGCCTGAGCAACAGAA...GGGTGTACAATCATATTTACAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CCA 90 bp TTTGGTCTTCTAAAATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCAATCAGCTGGCTACAGCGGTaGGCGATGCCCCAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: FGLLKSSASSEGQNNLAISWLQR*AMPQLL
Trigger: GAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCT...GATTGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATTTTAGAAGACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
3UTR-3UTR TCA 90 bp ACCATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAACTGGGACCGCAGGCATaGGCCACCACGCCTGGCATA +
Preference number: 2 (lower is better)
Translates to: TILHLILFLRALWETGKQLGPQA*ATTPGI
Trigger: TATGCCAGGCGTGGTGGCTCATGCCTGCGGTCCCAG...TTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR TCA 90 bp TTTCTGTGTTACTTAATGGCTTCTCCATTCTTCCAATTCCAAGGAATACAAAGGCTGGGACCGCAGGCATaGGCCACCACGCCTGGCATA +
Preference number: 2 (lower is better)
Translates to: FLCYLMASPFFQFQGIQRLGPQA*ATTPGI
Trigger: TATGCCAGGCGTGGTGGCTCATGCCTGCGGTCCCAG...CCTTTGTATTCCTTGGAATTGGAAGAATGGAGAAGCCATTAAGTAACACAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR TCA 90 bp CCTCAAAAGTACAGCAACATTGACTTAAAGCTTTGCTGCCCCCAAAGACACACTACTCCAGAGCTTGGGTaGCAGAGCGAGACTCCATGT +
Preference number: 2 (lower is better)
Translates to: PQKYSNIDLKLCCPQRHTTPELG*QSETPC
Trigger: ACATGGAGTCTCGCTCTGTCACCCAAGCTCTGGAGT...AGTGTGTCTTTGGGGGCAGCAAAGCTTTAAGTCAATGTTGCTGTACTTTTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431657.5
3UTR-3UTR CCA 90 bp GGCTGTGCTGGGGACACCATCAACCACTTGGGGTTGAATTCTATTGCTATGAATTTCTGTTGCTCAGGCTaGAGGGCAATGGTGCAATCT +
Preference number: 2 (lower is better)
Translates to: GCAGDTINHLGLNSIAMNFCCSG*RAMVQS
Trigger: AGATTGCACCATTGCCCTCCAGCCTGAGCAACAGAA...ATTCATAGCAATAGAATTCAACCCCAAGTGGTTGATGGTGTCCCCAGCACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CCA 90 bp CTGAATCCAGAGATCAGGTCTCTCGGCTGTGCTGGGGACACCATCAACCACTTGTGGATCACAGAGTGTTaGAATATTAAAATGCCCGAG +
Preference number: 2 (lower is better)
Translates to: LNPEIRSLGCAGDTINHLWITEC*NIKMPE
Trigger: CTCGGGCATTTTAATATTCCAACACTCTGTGATCCA...CAAGTGGTTGATGGTGTCCCCAGCACAGCCGAGAGACCTGATCTCTGGATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412611.6
3UTR-3UTR TCA 90 bp ATTCATTCAGTAGCAAGAGCCCAAAAATGGTGTTCCAAGCCAAGATTCACCTTGCCTCCTGGGCTCAAGTaGTCCTCCTATCTTAGCCTC +
Preference number: 2 (lower is better)
Translates to: IHSVARAQKWCSKPRFTLPPGLK*SSYLSL
Trigger: GAGGCTAAGATAGGAGGATCACTTGAGCCCAGGAGG...CAAGGTGAATCTTGGCTTGGAACACCATTTTTGGGCTCTTGCTACTGAATGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
3UTR-3UTR TCA 90 bp GGCTGTGCTGGGGACACCATCAACCACTTGGGGTTGAATTCTATTGCTATGAATAGCTCCTCTGCCACCTaGTATCTGAGAGTTGCAATT +
Preference number: 2 (lower is better)
Translates to: GCAGDTINHLGLNSIAMNSSSAT*YLRVAI
Trigger: AATTGCAACTCTCAGATATCAGGTGGCAGAGGAGCT...ATTCATAGCAATAGAATTCAACCCCAAGTGGTTGATGGTGTCCCCAGCACAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR GCA 90 bp GCTCAGAGCTCATTTCCCAGTAGCCAGTCAAAGGTCAGCACTGGGGTCAGACCTACCGAAATCTGCGAATaGTCAAGTCTCTCATATAAA +
Preference number: 2 (lower is better)
Translates to: AQSSFPSSQSKVSTGVRPTEICE*SSLSYK
Trigger: TTTATATGAGAGACTTGAGCATTCGCAGATTTCGGT...AGGTCTGACCCCAGTGCTGACCTTTGACTGGCTACTGGGAAATGAGCTCTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
3UTR-3UTR GCA 90 bp CGTGCAAGTTTCCAGTTGTCATTTCACAGTGGAGTTTTACAGACAGTGCTTAATCTGGGACTACAGGTGTaGCACCATGCCCTGCTGCAT +
Preference number: 2 (lower is better)
Translates to: RASFQLSFHSGVLQTVLNLGLQV*HHALLH
Trigger: ATGCAGCAGGGCATGGTGGCACACCTGTAGTCCCAG...ATTAAGCACTGTCTGTAAAACTCCACTGTGAAATGACAACTGGAAACTTGCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
3UTR-3UTR CCA 90 bp GGCTGTGCTGGGGACACCATCAACCACTTGGGGTTGAATTCTATTGCTATGAATATGAGCCACCACGCCTaGCATATAAAACCTCTCCTA +
Preference number: 2 (lower is better)
Translates to: GCAGDTINHLGLNSIAMNMSHHA*HIKPLL
Trigger: TAGGAGAGGTTTTATATGCCAGGCGTGGTGGCTCAT...ATTCATAGCAATAGAATTCAACCCCAAGTGGTTGATGGTGTCCCCAGCACAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CCA 90 bp ATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAAGGCGCCTCCCTAAGTAGCTaGGACCGCAGGCATGAGCCA +
Preference number: 2 (lower is better)
Translates to: ILHLILFLRALWETGKQGASLSS*DRRHEP
Trigger: TGGCTCATGCCTGCGGTCCCAGCTACTTAGGGAGGC...GCCTTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CCA 90 bp GCCGGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTTTCTGTTGCTCAGGCTaGAGGGCAATGGTGCAATCT +
Preference number: 2 (lower is better)
Translates to: AGANDRVSNISNNRKIVVFCCSG*RAMVQS
Trigger: AGATTGCACCATTGCCCTCCAGCCTGAGCAACAGAA...AACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CCA 90 bp AAATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCAATCTTTCAAAAAGTTAGCTGGCTACAGCGGTaGGCGATGCCCCAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: KSSASSEGQNNLAIFQKVSWLQR*AMPQLL
Trigger: GAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCT...AACTTTTTGAAAGATTGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
3UTR CAA 90 bp TTGGCAATCTTTCAAAAAGTTTTGTCCAGTGGTGATGGACATCCATaGTTCCTAGCATCACATGGCCCACTGCACTCATGCCAGAACGGT +
Preference number: 2 (lower is better)
Translates to: LAIFQKVLSSGDGHP*FLASHGPLHSCQNG
Trigger: ACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAACAATGGATGTCCATCACCACTGGACAAAACTTTTTGAAAGATTGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
3UTR-3UTR TCA 90 bp AGCATAAACTATCTGGCATGGTCAAAGGCCTCAGGCAAACAGAAACATTCCTATGGAGCACACATTAACTaGTGTTGTAGGGGAGTGGTC +
Preference number: 2 (lower is better)
Translates to: SINYLAWSKASGKQKHSYGAHIN*CCRGVV
Trigger: GACCACTCCCCTACAACATCAGTTAATGTGTGCTCC...ATAGGAATGTTTCTGTTTGCCTGAGGCCTTTGACCATGCCAGATAGTTTATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
3UTR-3UTR GCA 90 bp CACATGGCCCACTGCACTCATGCCAGAACGGTCTGTAAATATGATTGTACACCCAGTGTTTCCAAATTCTaGTGTGCTAAGCGGCTTAAA +
Preference number: 2 (lower is better)
Translates to: HMAHCTHARTVCKYDCTPSVSKF*CAKRLK
Trigger: TTTAAGCCGCTTAGCACAGCAGAATTTGGAAACACT...GGGTGTACAATCATATTTACAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
3UTR-3UTR GCA 90 bp TTTGGTCTTCTAAAATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCAATCCATCACATGGCCCACTaGACTCATGCCAGAACGGTC +
Preference number: 2 (lower is better)
Translates to: FGLLKSSASSEGQNNLAIHHMAH*THARTV
Trigger: GACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATG...GATTGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATTTTAGAAGACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
3UTR-3UTR CCA 90 bp ATCAATCACCTGTTTTGGACATTAACTGTCAATTACTGGCTGCAAAATATGTCTGCCTCCCTAAGTAGCTaGGACCGCAGGCATGAGCCA +
Preference number: 2 (lower is better)
Translates to: INHLFWTLTVNYWLQNMSASLSS*DRRHEP
Trigger: TGGCTCATGCCTGCGGTCCCAGCTACTTAGGGAGGC...AGACATATTTTGCAGCCAGTAATTGACAGTTAATGTCCAAAACAGGTGATTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CCA 90 bp ATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAAGGCGCAACCTTGGCCTCCTaGGCTCAAGTGATCCTCCTA +
Preference number: 2 (lower is better)
Translates to: ILHLILFLRALWETGKQGATLAS*AQVILL
Trigger: TAGGAGGATCACTTGAGCCCAGGAGGCCAAGGTTGC...GCCTTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CCA 90 bp GAGCAGAATCAGGAGAGACCACGTGCAAGTTTCCAGTTGTCATTTCACAGTGGAAAGCTCATCCAAGTCTaGATGTCCAGAGTTTTACTG +
Preference number: 2 (lower is better)
Translates to: EQNQERPRASFQLSFHSGKLIQV*MSRVLL
Trigger: CAGTAAAACTCTGGACATCCAGACTTGGATGAGCTT...TCCACTGTGAAATGACAACTGGAAACTTGCACGTGGTCTCTCCTGATTCTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
3UTR-3UTR GCA 90 bp TTATTTGGTCTTCTAAAATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCACATCACATGGCCCACTaGACTCATGCCAGAACGGTC +
Preference number: 2 (lower is better)
Translates to: LFGLLKSSASSEGQNNLAHHMAH*THARTV
Trigger: GACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATG...TGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATTTTAGAAGACCAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
3UTR-3UTR CCA 90 bp ATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAAGGCCTTAAACTATGCAGCTaGCTACAGCGGTGGGCGATG +
Preference number: 2 (lower is better)
Translates to: ILHLILFLRALWETGKQGLKLCS*LQRWAM
Trigger: CATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAG...GCCTTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CCA 90 bp GGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTGAGCCACTGGAGATTTGCTaGATCACAGAGTGTTGGAAT +
Preference number: 2 (lower is better)
Translates to: GANDRVSNISNNRKIVVEPLEIC*ITECWN
Trigger: ATTCCAACACTCTGTGATCCAGCAAATCTCCAGTGG...CTCAACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR TCA 90 bp GGCTGTGCTGGGGACACCATCAACCACTTGGGGTTGAATTCTATTGCTATGAATTTATCAGACTGCTTATaGCAATGTCAGTACCATACA +
Preference number: 2 (lower is better)
Translates to: GCAGDTINHLGLNSIAMNLSDCL*QCQYHT
Trigger: TGTATGGTACTGACATTGTCATAAGCAGTCTGATAA...ATTCATAGCAATAGAATTCAACCCCAAGTGGTTGATGGTGTCCCCAGCACAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR TCA 90 bp ATTCATTCAGTAGCAAGAGCCCAAAAATGGTGTTCCAAGCCAAGATTCACCTTGCTGCCACCTGATATCTaGGAGTTGCAATTGATGAGA +
Preference number: 2 (lower is better)
Translates to: IHSVARAQKWCSKPRFTLLPPDI*ELQLMR
Trigger: TCTCATCAATTGCAACTCTCAGATATCAGGTGGCAG...CAAGGTGAATCTTGGCTTGGAACACCATTTTTGGGCTCTTGCTACTGAATGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412611.6
3UTR-3UTR TCA 90 bp TGGAGAAACTGCCAAGAAAAGGAATTTGTGACTCCTGATCTCCCATATTCAATTCCTGGAGAGACTGGGTaGGGAGTTGTCTTCAACATA +
Preference number: 2 (lower is better)
Translates to: WRNCQEKEFVTPDLPYSIPGETG*GVVFNI
Trigger: TATGTTGAAGACAACTCCTCACCCAGTCTCTCCAGG...AATTGAATATGGGAGATCAGGAGTCACAAATTCCTTTTCTTGGCAGTTTCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444602.2
3UTR-3UTR GCA 90 bp TTTCATGTTCTCTCTTGCCTGCTGAGCTTTGGTGAGAATAAACCACTGGAGATTAAACCACTGGAGATTTaGTGGATCACAGAGTGTTGG +
Preference number: 2 (lower is better)
Translates to: FHVLSCLLSFGENKPLEIKPLEI*WITECW
Trigger: CCAACACTCTGTGATCCAGCAAATCTCCAGTGGTTT...AATCTCCAGTGGTTTATTCTCACCAAAGCTCAGCAGGCAAGAGAGAACATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR GCA 90 bp TTTCATGTTCTCTCTTGCCTGCTGAGCTTTGGTGAGAATAAACCACTGGAGATTTTTCATGTTCTCTCTTaGCTGCTGAGCTTTGGTGAG +
Preference number: 2 (lower is better)
Translates to: FHVLSCLLSFGENKPLEIFHVLS*LLSFGE
Trigger: CTCACCAAAGCTCAGCAGGCAAGAGAGAACATGAAA...AATCTCCAGTGGTTTATTCTCACCAAAGCTCAGCAGGCAAGAGAGAACATGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CCA 90 bp GGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTGAGAAGCAAGGCTTTTCCTaGATAGTGTTTGCCCATGAA +
Preference number: 2 (lower is better)
Translates to: GANDRVSNISNNRKIVVEKQGFS*IVFAHE
Trigger: TTCATGGGCAAACACTATCCAGGAAAAGCCTTGCTT...CTCAACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CCA 90 bp TTTCTGTGTTACTTAATGGCTTCTCCATTCTTCCAATTCCAAGGAATACAAAGGGTTCCTAGCATCACATaGCCCACTGCACTCATGCCA +
Preference number: 2 (lower is better)
Translates to: FLCYLMASPFFQFQGIQRVPSIT*PTALMP
Trigger: TGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAAC...CCTTTGTATTCCTTGGAATTGGAAGAATGGAGAAGCCATTAAGTAACACAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CCA 90 bp TTTCATGTTCTCTCTTGCCTGCTGAGCTTTGGTGAGAATAAACCACTGGAGATTCCACTGGAGATTTGCTaGATCACAGAGTGTTGGAAT +
Preference number: 2 (lower is better)
Translates to: FHVLSCLLSFGENKPLEIPLEIC*ITECWN
Trigger: ATTCCAACACTCTGTGATCCAGCAAATCTCCAGTGG...AATCTCCAGTGGTTTATTCTCACCAAAGCTCAGCAGGCAAGAGAGAACATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CCA 90 bp TGGAGAAACTGCCAAGAAAAGGAATTTGTGACTCCTGATCTCCCATATTCAATTAGTCCCTGGAGAGACTaGGTGAGGAGTTGTCTTCAA +
Preference number: 2 (lower is better)
Translates to: WRNCQEKEFVTPDLPYSISPWRD*VRSCLQ
Trigger: TTGAAGACAACTCCTCACCCAGTCTCTCCAGGGACT...AATTGAATATGGGAGATCAGGAGTCACAAATTCCTTTTCTTGGCAGTTTCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444602.2
3UTR-3UTR GCA 90 bp AAATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCAATCTTTCAAAAAGTTAAGCGGCTTAAACTATaGAGCTGGCTACAGCGGTGG +
Preference number: 2 (lower is better)
Translates to: KSSASSEGQNNLAIFQKVKRLKL*SWLQRW
Trigger: CCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTT...AACTTTTTGAAAGATTGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
3UTR-3UTR GCA 90 bp ATGTTTTCCATTGGATTGACTTTGCCCAGTAAATCTGCTCAGCAATATATTCAAAAGCGGCTTAAACTATaGAGCTGGCTACAGCGGTGG +
Preference number: 2 (lower is better)
Translates to: MFSIGLTLPSKSAQQYIQKRLKL*SWLQRW
Trigger: CCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTT...TTGAATATATTGCTGAGCAGATTTACTGGGCAAAGTCAATCCAATGGAAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431657.5
3UTR-3UTR CCA 90 bp ATGTTTTCCATTGGATTGACTTTGCCCAGTAAATCTGCTCAGCAATATATTCAAGTTCCTAGCATCACATaGCCCACTGCACTCATGCCA +
Preference number: 2 (lower is better)
Translates to: MFSIGLTLPSKSAQQYIQVPSIT*PTALMP
Trigger: TGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAAC...TTGAATATATTGCTGAGCAGATTTACTGGGCAAAGTCAATCCAATGGAAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431657.5
3UTR-3UTR TCA 90 bp TTTGGTCTTCTAAAATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCAATCAGTTTTGTCCAGTGGTaGTGGACATCCATTGTTCCT +
Preference number: 2 (lower is better)
Translates to: FGLLKSSASSEGQNNLAISFVQW*WTSIVP
Trigger: AGGAACAATGGATGTCCATCACCACTGGACAAAACT...GATTGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATTTTAGAAGACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
3UTR-3UTR TCA 90 bp TTTCATGTTCTCTCTTGCCTGCTGAGCTTTGGTGAGAATAAACCACTGGAGATTCGCAAACTTCGAGGGTaGAATAGTATTCTACTTTTC +
Preference number: 2 (lower is better)
Translates to: FHVLSCLLSFGENKPLEIRKLRG*NSILLF
Trigger: GAAAAGTAGAATACTATTTCACCCTCGAAGTTTGCG...AATCTCCAGTGGTTTATTCTCACCAAAGCTCAGCAGGCAAGAGAGAACATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CCA 90 bp CGTGCAAGTTTCCAGTTGTCATTTCACAGTGGAGTTTTACAGACAGTGCTTAATAAGCTCATCCAAGTCTaGATGTCCAGAGTTTTACTG +
Preference number: 2 (lower is better)
Translates to: RASFQLSFHSGVLQTVLNKLIQV*MSRVLL
Trigger: CAGTAAAACTCTGGACATCCAGACTTGGATGAGCTT...ATTAAGCACTGTCTGTAAAACTCCACTGTGAAATGACAACTGGAAACTTGCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
3UTR-3UTR CCA 90 bp GGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTGAGCTTGGGCAAAATTGGTaGTTATCTAATTTCTGTTAC +
Preference number: 2 (lower is better)
Translates to: GANDRVSNISNNRKIVVELGQNW*LSNFCY
Trigger: GTAACAGAAATTAGATAACCACCAATTTTGCCCAAG...CTCAACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CCA 90 bp ACCATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAATTTCTTAGAGCTCTTTaGGAAACAGGCAAGCAAGGC +
Preference number: 2 (lower is better)
Translates to: TILHLILFLRALWETGKQFLRAL*ETGKQG
Trigger: GCCTTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAA...TTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CCA 90 bp GGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTGAGACAAGAAATCCTGAATaGTCTGAACCATTTTACACT +
Preference number: 2 (lower is better)
Translates to: GANDRVSNISNNRKIVVETRNPE*SEPFYT
Trigger: AGTGTAAAATGGTTCAGACCATTCAGGATTTCTTGT...CTCAACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR CAA 90 bp CTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTaGAGAAGAGTGACAAGAAATCCTGAATGGTCTGAACCATTTTAC +
Preference number: 2 (lower is better)
Translates to: LMTGFQTSVITGRSW*RRVTRNPEWSEPFY
Trigger: GTAAAATGGTTCAGACCATTCAGGATTTCTTGTCACTCTTCTCAACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR TCA 90 bp AAATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCAATCTTTCAAAAAGTTCTGCCACCTGATATCTaGGAGTTGCAATTGATGAGA +
Preference number: 2 (lower is better)
Translates to: KSSASSEGQNNLAIFQKVLPPDI*ELQLMR
Trigger: TCTCATCAATTGCAACTCTCAGATATCAGGTGGCAG...AACTTTTTGAAAGATTGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
3UTR-3UTR TCA 90 bp ATCAATCACCTGTTTTGGACATTAACTGTCAATTACTGGCTGCAAAATATGTCTTTCTCTCTTGCCTGCTaGGCTTTGGTGAGAATAAAC +
Preference number: 2 (lower is better)
Translates to: INHLFWTLTVNYWLQNMSFSLAC*ALVRIN
Trigger: GTTTATTCTCACCAAAGCTCAGCAGGCAAGAGAGAA...AGACATATTTTGCAGCCAGTAATTGACAGTTAATGTCCAAAACAGGTGATTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CCA 90 bp ACCATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAAGTGAGAATAAACCACTaGAGATTTGCTGGATCACAG +
Preference number: 2 (lower is better)
Translates to: TILHLILFLRALWETGKQVRINH*RFAGSQ
Trigger: CTGTGATCCAGCAAATCTCCAGTGGTTTATTCTCAC...TTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR TCA 90 bp ATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAAGGCTATACAGATGCATGTTaGATTGTAGACATGAGTTCC +
Preference number: 2 (lower is better)
Translates to: ILHLILFLRALWETGKQGYTDAC*IVDMSS
Trigger: GGAACTCATGTCTACAATTCAACATGCATCTGTATA...GCCTTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR CAA 90 bp TCAGTACCATACATTCAACTGCTTTTAGTCCTTCTAGTCTTTCTCTaGGGCAAAATTGGTGGTTATCTAATTTCTGTTACCTATCAATCA +
Preference number: 2 (lower is better)
Translates to: SVPYIQLLLVLLVFL*GKIGGYLISVTYQS
Trigger: TGATTGATAGGTAACAGAAATTAGATAACCACCAATTTTGCCCAAGAGAAAGACTAGAAGGACTAAAAGCAGTTGAATGTATGGTACTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CCA 90 bp ACCATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAAACAAGAAATCCTGAATaGTCTGAACCATTTTACACT +
Preference number: 2 (lower is better)
Translates to: TILHLILFLRALWETGKQTRNPE*SEPFYT
Trigger: AGTGTAAAATGGTTCAGACCATTCAGGATTTCTTGT...TTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAATGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR CCA 72 bp GCTAAGCGGCTTAAACTATGCAGCTGGCTACAGCGGTaGGCGATGCCCCAGCTCCTCTGCCACCTGATATCT +
Preference number: 3 (lower is better)
Translates to: AKRLKLCSWLQR*AMPQLLCHLIS
Trigger: AGATATCAGGTGGCAGAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
3UTR CCA 72 bp AAATTCTGCTGTGCTAAGCGGCTTAAACTATGCAGCTaGCTACAGCGGTGGGCGATGCCCCAGCTCCTCTGC +
Preference number: 3 (lower is better)
Translates to: KFCCAKRLKLCS*LQRWAMPQLLC
Trigger: GCAGAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTTAGCACAGCAGAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
3UTR-3UTR CAA 90 bp CCACCCAAGGAAGCTCATCCAAGTCTGGATGTCCAGAGTTTTACTGGGGGTCAGGGTATCCATAGGGGATaGGTTCCAGGACCTCCCGTG +
Preference number: 3 (lower is better)
Translates to: PPKEAHPSLDVQSFTGGQGIHRG*VPGPPV
Trigger: CACGGGAGGTCCTGGAACCAATCCCCTATGGATACC...CTGACCCCCAGTAAAACTCTGGACATCCAGACTTGGATGAGCTTCCTTGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
3UTR GCA 72 bp GTTTCCAAATTCTGCTGTGCTAAGCGGCTTAAACTATaGAGCTGGCTACAGCGGTGGGCGATGCCCCAGCTC +
Preference number: 3 (lower is better)
Translates to: VSKFCCAKRLKL*SWLQRWAMPQL
Trigger: GAGCTGGGGCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTTAGCACAGCAGAATTTGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
3UTR CCA 72 bp AGCACTGAATCCAGAGATCAGGTCTCTCGGCTGTGCTaGGGACACCATCAACCACTTGGGGTTGAATTCTAT +
Preference number: 3 (lower is better)
Translates to: STESRDQVSRLC*GHHQPLGVEFY
Trigger: ATAGAATTCAACCCCAAGTGGTTGATGGTGTCCCCAGCACAGCCGAGAGACCTGATCTCTGGATTCAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
3UTR-3UTR CAA 90 bp TCCATTGTTCCTAGCATCACATGGCCCACTGCACTCATGCCAGAACGGTCTGTATTCCACTCTCGAGACTaGTTCAAGGTCTTCATCAGG +
Preference number: 3 (lower is better)
Translates to: SIVPSITWPTALMPERSVFHSRD*FKVFIR
Trigger: CCTGATGAAGACCTTGAACAAGTCTCGAGAGTGGAA...TACAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAACAATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
3UTR-3UTR CAA 90 bp CACATGGCCCACTGCACTCATGCCAGAACGGTCTGTAAATATGATTGTACACCCGGTGATGGACATCCATaGTTCCTAGCATCACATGGC +
Preference number: 3 (lower is better)
Translates to: HMAHCTHARTVCKYDCTPGDGHP*FLASHG
Trigger: GCCATGTGATGCTAGGAACAATGGATGTCCATCACC...GGGTGTACAATCATATTTACAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
3UTR TCA 72 bp CATCAACCACTTGGGGTTGAATTCTATTGCTATGAATaGGAGGTGACTCTGAGGGGCTTTAACCAGGCCGGG +
Preference number: 3 (lower is better)
Translates to: HQPLGVEFYCYE*EVTLRGFNQAG
Trigger: CCCGGCCTGGTTAAAGCCCCTCAGAGTCACCTCTCATTCATAGCAATAGAATTCAACCCCAAGTGGTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR CCA 72 bp CCAGTCAAAGGTCAGCACTGGGGTCAGACCTTTCTTTaGAATGTGCAAGGTTTAAGCAACCCAAGCTTGCTG +
Preference number: 3 (lower is better)
Translates to: PVKGQHWGQTFL*NVQGLSNPSLL
Trigger: CAGCAAGCTTGGGTTGCTTAAACCTTGCACATTCCAAAGAAAGGTCTGACCCCAGTGCTGACCTTTGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
3UTR-3UTR CAA 90 bp CAAAGGCCTCAGGCAAACAGAAACATTCCTATCCAGGGGCTCAGAGCTCATTTCATACATAGCAGTCCCTaGGTATCCATAGGGGATTGG +
Preference number: 3 (lower is better)
Translates to: QRPQANRNIPIQGLRAHFIHSSP*VSIGDW
Trigger: CCAATCCCCTATGGATACCAAGGGACTGCTATGTAT...GAAATGAGCTCTGAGCCCCTGGATAGGAATGTTTCTGTTTGCCTGAGGCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
3UTR-3UTR CAA 90 bp CCTCAGGCAAACAGAAACATTCCTATCCAGGGGCTCAGAGCTCATTTCCCAGTAATACATAGCAGTCCCTaGGTATCCATAGGGGATTGG +
Preference number: 3 (lower is better)
Translates to: PQANRNIPIQGLRAHFPVIHSSP*VSIGDW
Trigger: CCAATCCCCTATGGATACCAAGGGACTGCTATGTAT...TACTGGGAAATGAGCTCTGAGCCCCTGGATAGGAATGTTTCTGTTTGCCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
3UTR-3UTR CAA 90 bp CCAGTCAAAGGTCAGCACTGGGGTCAGACCTTTCTTTGGAATGTGCAAGGTTTACTATGTTGCCCAGGCTaGAATTCCTGGGCTCAAGTA +
Preference number: 3 (lower is better)
Translates to: PVKGQHWGQTFLWNVQGLLCCPG*NSWAQV
Trigger: TACTTGAGCCCAGGAATTCAAGCCTGGGCAACATAG...TAAACCTTGCACATTCCAAAGAAAGGTCTGACCCCAGTGCTGACCTTTGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
3UTR TCA 72 bp ACTGGGGGTCAGTCAGGTAAGCATTTAGTGCTTATGTaGCTCACTTCAGCTACTCAGTCTCAGCTCCCCAAA +
Preference number: 3 (lower is better)
Translates to: TGGQSGKHLVLM*LTSATQSQLPK
Trigger: TTTGGGGAGCTGAGACTGAGTAGCTGAAGTGAGTCACATAAGCACTAAATGCTTACCTGACTGACCCCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
3UTR-3UTR CAA 90 bp TCCAAATTCTGCTGTGCTAAGCGGCTTAAACTATGCAGCTGGCTACAGCGGTGGATCCTTTTAGCTTCTTaGAGAGGCTGGGTATGCATA +
Preference number: 3 (lower is better)
Translates to: SKFCCAKRLKLCSWLQRWILLAS*RGWVCI
Trigger: TATGCATACCCAGCCTCTCAAAGAAGCTAAAAGGAT...CCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTTAGCACAGCAGAATTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
3UTR-3UTR CAA 90 bp AGACCACGTGCAAGTTTCCAGTTGTCATTTCACAGTGGAGTTTTACAGACAGTGCTATGTTGCCCAGGCTaGAATTCCTGGGCTCAAGTA +
Preference number: 3 (lower is better)
Translates to: RPRASFQLSFHSGVLQTVLCCPG*NSWAQV
Trigger: TACTTGAGCCCAGGAATTCAAGCCTGGGCAACATAG...CACTGTCTGTAAAACTCCACTGTGAAATGACAACTGGAAACTTGCACGTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
3UTR-3UTR CAA 90 bp CACATGGCCCACTGCACTCATGCCAGAACGGTCTGTAAATATGATTGTACACCCACAGCACTTTTCCCATaGTTATCTAACCAGGATGTG +
Preference number: 3 (lower is better)
Translates to: HMAHCTHARTVCKYDCTPTALFP*LSNQDV
Trigger: CACATCCTGGTTAGATAACAATGGGAAAAGTGCTGT...GGGTGTACAATCATATTTACAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000417768.1
3UTR-3UTR CAA 90 bp GGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTGAGGGTGATGGACATCCATaGTTCCTAGCATCACATGGC +
Preference number: 3 (lower is better)
Translates to: GANDRVSNISNNRKIVVEGDGHP*FLASHG
Trigger: GCCATGTGATGCTAGGAACAATGGATGTCCATCACC...CTCAACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CAA 90 bp CATTCAGTAGCAAGAGCCCAAAAATGGTGTTCCAAGCCAAGATTCACCTTGTCCGACACCATCAACCACTaGGGGTTGAATTCTATTGCT +
Preference number: 3 (lower is better)
Translates to: HSVARAQKWCSKPRFTLSDTINH*GLNSIA
Trigger: AGCAATAGAATTCAACCCCAAGTGGTTGATGGTGTC...GGACAAGGTGAATCTTGGCTTGGAACACCATTTTTGGGCTCTTGCTACTGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
3UTR-3UTR CAA 90 bp GGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTGAGGTGTGTAGAAGAGGGTaGCTAACACAAGTAGTGGCA +
Preference number: 3 (lower is better)
Translates to: GANDRVSNISNNRKIVVEVCRRG*LTQVVA
Trigger: TGCCACTACTTGTGTTAGCAACCCTCTTCTACACAC...CTCAACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431657.5
3UTR-3UTR CAA 90 bp ATTCATTCAGTAGCAAGAGCCCAAAAATGGTGTTCCAAGCCAAGATTCACCTTGTTCCACTCTCGAGACTaGTTCAAGGTCTTCATCAGG +
Preference number: 3 (lower is better)
Translates to: IHSVARAQKWCSKPRFTLFHSRD*FKVFIR
Trigger: CCTGATGAAGACCTTGAACAAGTCTCGAGAGTGGAA...CAAGGTGAATCTTGGCTTGGAACACCATTTTTGGGCTCTTGCTACTGAATGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412611.6
3UTR-3UTR CAA 90 bp CACATGGCCCACTGCACTCATGCCAGAACGGTCTGTAAATATGATTGTACACCCATCTTTCAAAAAGTTTaGTCCAGTGGTGATGGACAT +
Preference number: 3 (lower is better)
Translates to: HMAHCTHARTVCKYDCTPIFQKV*SSGDGH
Trigger: ATGTCCATCACCACTGGACAAAACTTTTTGAAAGAT...GGGTGTACAATCATATTTACAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
3UTR GCA 72 bp CCTCAAAAGTACAGCAACATTGACTTAAAGCTTTGCTaGCCCCAAAGACACACTTCTTCAGAAGATCACGAC +
Preference number: 3 (lower is better)
Translates to: PQKYSNIDLKLC*PQRHTSSEDHD
Trigger: GTCGTGATCTTCTGAAGAAGTGTGTCTTTGGGGGCAGCAAAGCTTTAAGTCAATGTTGCTGTACTTTTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431657.5
3UTR GCA 72 bp CCACCTCAAAAGTACAGCAACATTGACTTAAAGCTTTaGTGCCCCCAAAGACACACTTCTTCAGAAGATCAC +
Preference number: 3 (lower is better)
Translates to: PPQKYSNIDLKL*CPQRHTSSEDH
Trigger: GTGATCTTCTGAAGAAGTGTGTCTTTGGGGGCAGCAAAGCTTTAAGTCAATGTTGCTGTACTTTTGAGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431657.5
3UTR CCA 72 bp AGAGCTCTTTGGGAAACAGGCAAGCAAGGCTTTTCCTaGATAGTGTTTGCCCATGAAACAAATGAATCACCT +
Preference number: 3 (lower is better)
Translates to: RALWETGKQGFS*IVFAHETNESP
Trigger: AGGTGATTCATTTGTTTCATGGGCAAACACTATCCAGGAAAAGCCTTGCTTGCCTGTTTCCCAAAGAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CAA 90 bp CATTCAGTAGCAAGAGCCCAAAAATGGTGTTCCAAGCCAAGATTCACCTTGTCCCTTCTAGTCTTTCTCTaGGGCAAAATTGGTGGTTAT +
Preference number: 3 (lower is better)
Translates to: HSVARAQKWCSKPRFTLSLLVFL*GKIGGY
Trigger: ATAACCACCAATTTTGCCCAAGAGAAAGACTAGAAG...GGACAAGGTGAATCTTGGCTTGGAACACCATTTTTGGGCTCTTGCTACTGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
3UTR-3UTR CAA 90 bp GGCTGTGCTGGGGACACCATCAACCACTTGGGGTTGAATTCTATTGCTATGAATATCTTTCAAAAAGTTTaGTCCAGTGGTGATGGACAT +
Preference number: 3 (lower is better)
Translates to: GCAGDTINHLGLNSIAMNIFQKV*SSGDGH
Trigger: ATGTCCATCACCACTGGACAAAACTTTTTGAAAGAT...ATTCATAGCAATAGAATTCAACCCCAAGTGGTTGATGGTGTCCCCAGCACAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
3UTR GCA 72 bp GAAAAGGTGAATAGAGCAGAATCAGGAGAGACCACGTaGAAGTTTCCAGTTGTCATTTCACAGTGGAGTTTT +
Preference number: 3 (lower is better)
Translates to: EKVNRAESGETT*KFPVVISQWSF
Trigger: AAAACTCCACTGTGAAATGACAACTGGAAACTTGCACGTGGTCTCTCCTGATTCTGCTCTATTCACCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
3UTR GCA 72 bp CTGCTGAGCTTTGGTGAGAATAAACCACTGGAGATTTaGTGGATCACAGAGTGTTGGAATATTAAAATGCCC +
Preference number: 3 (lower is better)
Translates to: LLSFGENKPLEI*WITECWNIKMP
Trigger: GGGCATTTTAATATTCCAACACTCTGTGATCCAGCAAATCTCCAGTGGTTTATTCTCACCAAAGCTCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
3UTR CCA 72 bp TCCTTTCTGATTCATTCAGTAGCAAGAGCCCAAAAATaGTGTTCCAAGCCAAGATTCACCTTGTCCTCTTCA +
Preference number: 3 (lower is better)
Translates to: SFLIHSVARAQK*CSKPRFTLSSS
Trigger: TGAAGAGGACAAGGTGAATCTTGGCTTGGAACACCATTTTTGGGCTCTTGCTACTGAATGAATCAGAAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
3UTR CCA 72 bp CTGAGCTTTGGTGAGAATAAACCACTGGAGATTTGCTaGATCACAGAGTGTTGGAATATTAAAATGCCCGAG +
Preference number: 3 (lower is better)
Translates to: LSFGENKPLEIC*ITECWNIKMPE
Trigger: CTCGGGCATTTTAATATTCCAACACTCTGTGATCCAGCAAATCTCCAGTGGTTTATTCTCACCAAAGCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CAA 90 bp GGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTGAGACAACAATCCACCATTaGTATACTAGAAATGCTGGG +
Preference number: 3 (lower is better)
Translates to: GANDRVSNISNNRKIVVETTIHH*YTRNAG
Trigger: CCCAGCATTTCTAGTATACAAATGGTGGATTGTTGT...CTCAACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
3UTR GCA 72 bp AGATTTGCTGGATCACAGAGTGTTGGAATATTAAAATaGCCGAGTTCATGCAAGCTTGGAGCATATCTGTCA +
Preference number: 3 (lower is better)
Translates to: RFAGSQSVGILK*PSSCKLGAYLS
Trigger: TGACAGATATGCTCCAAGCTTGCATGAACTCGGGCATTTTAATATTCCAACACTCTGTGATCCAGCAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
3UTR CCA 72 bp GATCATATACTATCAAATACTAGTCCCTGGAGAGACTaGGTGAGGAGTTGTCTTCAACATACTTCAGCATTC +
Preference number: 3 (lower is better)
Translates to: DHILSNTSPWRD*VRSCLQHTSAF
Trigger: GAATGCTGAAGTATGTTGAAGACAACTCCTCACCCAGTCTCTCCAGGGACTAGTATTTGATAGTATATGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444602.2
3UTR-3UTR CAA 90 bp GGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTGAGTCTTTTTATCTAGCCTaGCCAACCAACATCATAAGA +
Preference number: 3 (lower is better)
Translates to: GANDRVSNISNNRKIVVESFYLA*PTNIIR
Trigger: TCTTATGATGTTGGTTGGCAAGGCTAGATAAAAAGA...CTCAACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CAA 90 bp GGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTGAGCTATACAGATGCATGTaGAATTGTAGACATGAGTTC +
Preference number: 3 (lower is better)
Translates to: GANDRVSNISNNRKIVVELYRCM*NCRHEF
Trigger: GAACTCATGTCTACAATTCAACATGCATCTGTATAG...CTCAACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CAA 90 bp GTGTTACTTAATGGCTTCTCCATTCTTCCAATTCCAAGGAATACAAAGGTCTCCACAGCACTTTTCCCATaGTTATCTAACCAGGATGTG +
Preference number: 3 (lower is better)
Translates to: VLLNGFSILPIPRNTKVSTALFP*LSNQDV
Trigger: CACATCCTGGTTAGATAACAATGGGAAAAGTGCTGT...GGAGACCTTTGTATTCCTTGGAATTGGAAGAATGGAGAAGCCATTAAGTAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412611.6
3UTR-3UTR CAA 90 bp TTTCATGTTCTCTCTTGCCTGCTGAGCTTTGGTGAGAATAAACCACTGGAGATTTCTTTTTATCTAGCCTaGCCAACCAACATCATAAGA +
Preference number: 3 (lower is better)
Translates to: FHVLSCLLSFGENKPLEISFYLA*PTNIIR
Trigger: TCTTATGATGTTGGTTGGCAAGGCTAGATAAAAAGA...AATCTCCAGTGGTTTATTCTCACCAAAGCTCAGCAGGCAAGAGAGAACATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CAA 90 bp TTTGGTCTTCTAAAATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCAATCATCCTTTTAGCTTCTTaGAGAGGCTGGGTATGCATA +
Preference number: 3 (lower is better)
Translates to: FGLLKSSASSEGQNNLAIILLAS*RGWVCI
Trigger: TATGCATACCCAGCCTCTCAAAGAAGCTAAAAGGAT...GATTGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATTTTAGAAGACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
3UTR-3UTR CAA 90 bp ATCAATCACCTGTTTTGGACATTAACTGTCAATTACTGGCTGCAAAATATGTCTCGAGTTCATGCAAGCTaGGAGCATATCTGTCACTGT +
Preference number: 3 (lower is better)
Translates to: INHLFWTLTVNYWLQNMSRVHAS*EHICHC
Trigger: ACAGTGACAGATATGCTCCAAGCTTGCATGAACTCG...AGACATATTTTGCAGCCAGTAATTGACAGTTAATGTCCAAAACAGGTGATTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412611.6
3UTR TCA 72 bp GTTCCAAGCCAAGATTCACCTTGTCCTCTTCAGAAATaGCCTGAAGAGCTTTTGGGTTGGTTAAAAATATTG +
Preference number: 3 (lower is better)
Translates to: VPSQDSPCPLQK*PEELLGWLKIL
Trigger: CAATATTTTTAACCAACCCAAAAGCTCTTCAGGTCATTTCTGAAGAGGACAAGGTGAATCTTGGCTTGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
3UTR-3UTR CAA 90 bp ACCATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAAACAGGAAGATCGTGGTaGAGAAGAGTGACAAGAAAT +
Preference number: 3 (lower is better)
Translates to: TILHLILFLRALWETGKQTGRSW*RRVTRN
Trigger: ATTTCTTGTCACTCTTCTCAACCACGATCTTCCTGT...TTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CAA 90 bp ATCAATCACCTGTTTTGGACATTAACTGTCAATTACTGGCTGCAAAATATGTCTGACACCATCAACCACTaGGGGTTGAATTCTATTGCT +
Preference number: 3 (lower is better)
Translates to: INHLFWTLTVNYWLQNMSDTINH*GLNSIA
Trigger: AGCAATAGAATTCAACCCCAAGTGGTTGATGGTGTC...AGACATATTTTGCAGCCAGTAATTGACAGTTAATGTCCAAAACAGGTGATTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CAA 90 bp TTATTTGGTCTTCTAAAATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCAATCCTTTTAGCTTCTTaGAGAGGCTGGGTATGCATA +
Preference number: 3 (lower is better)
Translates to: LFGLLKSSASSEGQNNLAILLAS*RGWVCI
Trigger: TATGCATACCCAGCCTCTCAAAGAAGCTAAAAGGAT...TGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATTTTAGAAGACCAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
3UTR CCA 72 bp ACTATAAATCACATTGTTAGCATAAACTATCTGGCATaGTCAAAGGCCTCAGGCAAACAGAAACATTCCTAT +
Preference number: 3 (lower is better)
Translates to: TINHIVSINYLA*SKASGKQKHSY
Trigger: ATAGGAATGTTTCTGTTTGCCTGAGGCCTTTGACCATGCCAGATAGTTTATGCTAACAATGTGATTTATAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
3UTR-3UTR CAA 90 bp ACCATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAAATCTTTCAAAAAGTTTaGTCCAGTGGTGATGGACAT +
Preference number: 3 (lower is better)
Translates to: TILHLILFLRALWETGKQIFQKV*SSGDGH
Trigger: ATGTCCATCACCACTGGACAAAACTTTTTGAAAGAT...TTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAATGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
3UTR-3UTR CAA 90 bp ATCAATCACCTGTTTTGGACATTAACTGTCAATTACTGGCTGCAAAATATGTCTCTATACAGATGCATGTaGAATTGTAGACATGAGTTC +
Preference number: 3 (lower is better)
Translates to: INHLFWTLTVNYWLQNMSLYRCM*NCRHEF
Trigger: GAACTCATGTCTACAATTCAACATGCATCTGTATAG...AGACATATTTTGCAGCCAGTAATTGACAGTTAATGTCCAAAACAGGTGATTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp GGGATTGGTTCCAGGACCTCCCGTGGATACCGAAATCTGCGAATGCTCAAGTCTCTGCCCTCGCCCCGGTaGGCGACAGGCTTTGACGGG +
Preference number: 4 (lower is better)
Translates to: GIGSRTSRGYRNLRMLKSLPSPR*ATGFDG
Trigger: CCCGTCAAAGCCTGTCGCCCACCGGGGCGAGGGCAG...AGACTTGAGCATTCGCAGATTTCGGTATCCACGGGAGGTCCTGGAACCAATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396078.7
CDS-3UTR TCA 90 bp CTGAATCCAGAGATCAGGTCTCTCGGCTGTGCTGGGGACACCATCAACCACTTGCTGGGACCGCAGGCATaGGCCACCACGCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: LNPEIRSLGCAGDTINHLLGPQA*ATTPGI
Trigger: TATGCCAGGCGTGGTGGCTCATGCCTGCGGTCCCAG...CAAGTGGTTGATGGTGTCCCCAGCACAGCCGAGAGACCTGATCTCTGGATTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR CCA 90 bp TTAAACTATGCAGCTGGCTACAGCGGTGGGCGATGCCCCAGCTCCTCTGCCACCGGCAATGGTGCAATCTaGGCCCACTGCAACCTTGGC +
Preference number: 4 (lower is better)
Translates to: LNYAAGYSGGRCPSSSATGNGAI*AHCNLG
Trigger: GCCAAGGTTGCAGTGGGCCCAGATTGCACCATTGCC...GGTGGCAGAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp TTAAACTATGCAGCTGGCTACAGCGGTGGGCGATGCCCCAGCTCCTCTGCCACCGCAACCTTGGCCTCCTaGGCTCAAGTGATCCTCCTA +
Preference number: 4 (lower is better)
Translates to: LNYAAGYSGGRCPSSSATATLAS*AQVILL
Trigger: TAGGAGGATCACTTGAGCCCAGGAGGCCAAGGTTGC...GGTGGCAGAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp AGCGGCTTAAACTATGCAGCTGGCTACAGCGGTGGGCGATGCCCCAGCTCCTCTGTCTCTCGGCTGTGCTaGGGACACCATCAACCACTT +
Preference number: 4 (lower is better)
Translates to: SGLNYAAGYSGGRCPSSSVSRLC*GHHQPL
Trigger: AAGTGGTTGATGGTGTCCCCAGCACAGCCGAGAGAC...AGAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp CCCAAGGAAGCTCATCCAAGTCTGGATGTCCAGAGTTTTACTGGGGGTCAGTCAGACGCCCTGGTTGGCTaGAGCGTGCCAGGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: PKEAHPSLDVQSFTGGQSDALVG*SVPGLP
Trigger: GGGAAGGCCTGGCACGCTCCAGCCAACCAGGGCGTC...TGACTGACCCCCAGTAAAACTCTGGACATCCAGACTTGGATGAGCTTCCTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396078.7
CDS-3UTR CCA 90 bp CAAAGGCCTCAGGCAAACAGAAACATTCCTATCCAGGGGCTCAGAGCTCATTTCCACTGGGGCGTCAGCTaGCCAACCAGCGCGCGACGC +
Preference number: 4 (lower is better)
Translates to: QRPQANRNIPIQGLRAHFHWGVS*PTSARR
Trigger: GCGTCGCGCGCTGGTTGGCCAGCTGACGCCCCAGTG...GAAATGAGCTCTGAGCCCCTGGATAGGAATGTTTCTGTTTGCCTGAGGCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396078.7
CDS-3UTR TCA 90 bp TTAAACTATGCAGCTGGCTACAGCGGTGGGCGATGCCCCAGCTCCTCTGCCACCAAGGCCTCAAGGCATTaGCTGCTTCAGCTCCCGATA +
Preference number: 4 (lower is better)
Translates to: LNYAAGYSGGRCPSSSATKASRH*LLQLPI
Trigger: TATCGGGAGCTGAAGCAGTCAATGCCTTGAGGCCTT...GGTGGCAGAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR GCA 90 bp TTAAACTATGCAGCTGGCTACAGCGGTGGGCGATGCCCCAGCTCCTCTGCCACCAAGCGGCTTAAACTATaGAGCTGGCTACAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LNYAAGYSGGRCPSSSATKRLKL*SWLQRW
Trigger: CCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTT...GGTGGCAGAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR TCA 90 bp GATTGGTTCCAGGACCTCCCGTGGATACCGAAATCTGCGAATGCTCAAGTCTCTAGCCGCAGTGCCCTCTaGGCCCCCAACCCTGAATTC +
Preference number: 4 (lower is better)
Translates to: DWFQDLPWIPKSANAQVSSRSAL*APNPEF
Trigger: GAATTCAGGGTTGGGGGCTCAGAGGGCACTGCGGCT...AGAGACTTGAGCATTCGCAGATTTCGGTATCCACGGGAGGTCCTGGAACCAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396078.7
CDS-3UTR GCA 90 bp GCTCAGAGCTCATTTCCCAGTAGCCAGTCAAAGGTCAGCACTGGGGTCAGACCTCTGGGACTACAGGTGTaGCACCATGCCCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: AQSSFPSSQSKVSTGVRPLGLQV*HHALLH
Trigger: ATGCAGCAGGGCATGGTGGCACACCTGTAGTCCCAG...AGGTCTGACCCCAGTGCTGACCTTTGACTGGCTACTGGGAAATGAGCTCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR CCA 90 bp AGCGGCTTAAACTATGCAGCTGGCTACAGCGGTGGGCGATGCCCCAGCTCCTCTGTACTAAAAGGTTCCTaGCCATCGGAGGAACTCTGG +
Preference number: 4 (lower is better)
Translates to: SGLNYAAGYSGGRCPSSSVLKGS*PSEELW
Trigger: CCAGAGTTCCTCCGATGGCCAGGAACCTTTTAGTAC...AGAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CCA 90 bp GTTCCTAGCATCACATGGCCCACTGCACTCATGCCAGAACGGTCTGTAAATATGAGCTGGCTACAGCGGTaGGCGATGCCCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VPSITWPTALMPERSVNMSWLQR*AMPQLL
Trigger: GAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCT...CATATTTACAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CCA 90 bp CCACCCAAGGAAGCTCATCCAAGTCTGGATGTCCAGAGTTTTACTGGGGGTCAGCAACCGAGCACGCGCTaGATCTTGGGGAAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PPKEAHPSLDVQSFTGGQQPSTR*ILGKKG
Trigger: CCCCTTCTTCCCCAAGATCCAGCGCGTGCTCGGTTG...CTGACCCCCAGTAAAACTCTGGACATCCAGACTTGGATGAGCTTCCTTGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383746.7
CDS-3UTR CCA 90 bp TATCTGGCATGGTCAAAGGCCTCAGGCAAACAGAAACATTCCTATCCAGGGGCTTGGTCCGGCAGGTGGTaGGTCCTGACCCAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: YLAWSKASGKQKHSYPGAWSGRW*VLTQGP
Trigger: AGGCCCTTGGGTCAGGACCCACCACCTGCCGGACCA...AGCCCCTGGATAGGAATGTTTCTGTTTGCCTGAGGCCTTTGACCATGCCAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383746.7
CDS-3UTR TCA 90 bp TCTGCTGTGCTAAGCGGCTTAAACTATGCAGCTGGCTACAGCGGTGGGCGATGCAAGGCCTCAAGGCATTaGCTGCTTCAGCTCCCGATA +
Preference number: 4 (lower is better)
Translates to: SAVLSGLNYAAGYSGGRCKASRH*LLQLPI
Trigger: TATCGGGAGCTGAAGCAGTCAATGCCTTGAGGCCTT...GCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTTAGCACAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR TCA 90 bp TTAAACTATGCAGCTGGCTACAGCGGTGGGCGATGCCCCAGCTCCTCTGCCACCAGCTCCTCTGCCACCTaGTATCTGAGAGTTGCAATT +
Preference number: 4 (lower is better)
Translates to: LNYAAGYSGGRCPSSSATSSSAT*YLRVAI
Trigger: AATTGCAACTCTCAGATATCAGGTGGCAGAGGAGCT...GGTGGCAGAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR GCA 90 bp AGACTTGTCCCATTTGATGGGCCTGTCAGGCATCCTTTTAGCTTCTTTGAGAGGTACAGCGGTGGGCGATaGCCCAGCTCCTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: RLVPFDGPVRHPFSFFERYSGGR*PSSSAT
Trigger: GGTGGCAGAGGAGCTGGGGCATCGCCCACCGCTGTA...CCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCCCATCAAATGGGACAAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CCA 90 bp CTGAATCCAGAGATCAGGTCTCTCGGCTGTGCTGGGGACACCATCAACCACTTGGCAACCTTGGCCTCCTaGGCTCAAGTGATCCTCCTA +
Preference number: 4 (lower is better)
Translates to: LNPEIRSLGCAGDTINHLATLAS*AQVILL
Trigger: TAGGAGGATCACTTGAGCCCAGGAGGCCAAGGTTGC...CAAGTGGTTGATGGTGTCCCCAGCACAGCCGAGAGACCTGATCTCTGGATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR TCA 90 bp AGCGGCTTAAACTATGCAGCTGGCTACAGCGGTGGGCGATGCCCCAGCTCCTCTCTGCCACCTGATATCTaGGAGTTGCAATTGATGAGA +
Preference number: 4 (lower is better)
Translates to: SGLNYAAGYSGGRCPSSSLPPDI*ELQLMR
Trigger: TCTCATCAATTGCAACTCTCAGATATCAGGTGGCAG...AGAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR TCA 90 bp GCCGGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTCTGGGACCGCAGGCATaGGCCACCACGCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: AGANDRVSNISNNRKIVVLGPQA*ATTPGI
Trigger: TATGCCAGGCGTGGTGGCTCATGCCTGCGGTCCCAG...AACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR TCA 90 bp AGCGGCTTAAACTATGCAGCTGGCTACAGCGGTGGGCGATGCCCCAGCTCCTCTTGTCCTCTTCAGAAATaGCCTGAAGAGCTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: SGLNYAAGYSGGRCPSSSCPLQK*PEELLG
Trigger: ACCCAAAAGCTCTTCAGGTCATTTCTGAAGAGGACA...AGAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412611.6
CDS-3UTR TCA 90 bp TATCTGGCATGGTCAAAGGCCTCAGGCAAACAGAAACATTCCTATCCAGGGGCTGAGGGACTCGGAAAATaGTGGTCCGGCAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: YLAWSKASGKQKHSYPGAEGLGK*WSGRWW
Trigger: CCACCACCTGCCGGACCATCATTTTCCGAGTCCCTC...AGCCCCTGGATAGGAATGTTTCTGTTTGCCTGAGGCCTTTGACCATGCCAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383746.7
CDS-3UTR GCA 90 bp CATCCATTGTTCCTAGCATCACATGGCCCACTGCACTCATGCCAGAACGGTCTGCATCACATGGCCCACTaGACTCATGCCAGAACGGTC +
Preference number: 4 (lower is better)
Translates to: HPLFLASHGPLHSCQNGLHHMAH*THARTV
Trigger: GACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATG...CAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAACAATGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR GCA 90 bp CAAAGGCCTCAGGCAAACAGAAACATTCCTATCCAGGGGCTCAGAGCTCATTTCCCTGACCCAAGGGCCTaGAAGGAACGGAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: QRPQANRNIPIQGLRAHFPDPRA*KERRRA
Trigger: TGCCCTTCTCCGTTCCTTGCAGGCCCTTGGGTCAGG...GAAATGAGCTCTGAGCCCCTGGATAGGAATGTTTCTGTTTGCCTGAGGCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383746.7
CDS-3UTR CCA 90 bp TCCCATTTGATGGGCCTGTCAGGCATCCTTTTAGCTTCTTTGAGAGGCTGGGTAGCCTCCCTAAGTAGCTaGGACCGCAGGCATGAGCCA +
Preference number: 4 (lower is better)
Translates to: SHLMGLSGILLASLRGWVASLSS*DRRHEP
Trigger: TGGCTCATGCCTGCGGTCCCAGCTACTTAGGGAGGC...TACCCAGCCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCCCATCAAATGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp TCCAAATTCTGCTGTGCTAAGCGGCTTAAACTATGCAGCTGGCTACAGCGGTGGGGCAATGGTGCAATCTaGGCCCACTGCAACCTTGGC +
Preference number: 4 (lower is better)
Translates to: SKFCCAKRLKLCSWLQRWGNGAI*AHCNLG
Trigger: GCCAAGGTTGCAGTGGGCCCAGATTGCACCATTGCC...CCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTTAGCACAGCAGAATTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp GTAGCCAGTCAAAGGTCAGCACTGGGGTCAGACCTTTCTTTGGAATGTGCAAGGGCACGCGCTGGATCTTaGGGAAGAAGGGGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: VASQRSALGSDLSLECARARAGS*GRRGKG
Trigger: TCCCTTTCCCCTTCTTCCCCAAGATCCAGCGCGTGC...CCTTGCACATTCCAAAGAAAGGTCTGACCCCAGTGCTGACCTTTGACTGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383746.7
CDS-3UTR CCA 90 bp CCACCCAAGGAAGCTCATCCAAGTCTGGATGTCCAGAGTTTTACTGGGGGTCAGGTATCCATAGGGGATTaGTTCCAGGACCTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: PPKEAHPSLDVQSFTGGQVSIGD*FQDLPW
Trigger: CCACGGGAGGTCCTGGAACCAATCCCCTATGGATAC...CTGACCCCCAGTAAAACTCTGGACATCCAGACTTGGATGAGCTTCCTTGGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR TCA 90 bp AGCGGCTTAAACTATGCAGCTGGCTACAGCGGTGGGCGATGCCCCAGCTCCTCTAACAGAGTAAAAATGTaGAATGCAGAGGTGCATCCC +
Preference number: 4 (lower is better)
Translates to: SGLNYAAGYSGGRCPSSSNRVKM*NAEVHP
Trigger: GGGATGCACCTCTGCATTTCACATTTTTACTCTGTT...AGAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR TCA 90 bp AGACCACGTGCAAGTTTCCAGTTGTCATTTCACAGTGGAGTTTTACAGACAGTGGCAGGTGGTGGGTCCTaGCCCAAGGGCCTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: RPRASFQLSFHSGVLQTVAGGGS*PKGLQG
Trigger: TCCTTGCAGGCCCTTGGGTCAGGACCCACCACCTGC...CACTGTCTGTAAAACTCCACTGTGAAATGACAACTGGAAACTTGCACGTGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383746.7
CDS-3UTR TCA 90 bp GCTCAGAGCTCATTTCCCAGTAGCCAGTCAAAGGTCAGCACTGGGGTCAGACCTGGAGCACACATTAACTaGTGTTGTAGGGGAGTGGTC +
Preference number: 4 (lower is better)
Translates to: AQSSFPSSQSKVSTGVRPGAHIN*CCRGVV
Trigger: GACCACTCCCCTACAACATCAGTTAATGTGTGCTCC...AGGTCTGACCCCAGTGCTGACCTTTGACTGGCTACTGGGAAATGAGCTCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR TCA 90 bp TCACTTCAGCTACTCAGTCTCAGCTCCCCAAATACCCAAGGTCAAATTAATACAGGGACGAGCTGCAGGTaGCGCCCTGGTTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SLQLLSLSSPNTQGQINTGTSCR*RPGWLE
Trigger: CTCCAGCCAACCAGGGCGTCACCTGCAGCTCGTCCC...TGTATTAATTTGACCTTGGGTATTTGGGGAGCTGAGACTGAGTAGCTGAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396078.7
CDS-3UTR TCA 90 bp TCCATTGTTCCTAGCATCACATGGCCCACTGCACTCATGCCAGAACGGTCTGTAACTCCAGAGCTTGGGTaGCAGAGCGAGACTCCATGT +
Preference number: 4 (lower is better)
Translates to: SIVPSITWPTALMPERSVTPELG*QSETPC
Trigger: ACATGGAGTCTCGCTCTGTCACCCAAGCTCTGGAGT...TACAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAACAATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431657.5
CDS-3UTR GCA 90 bp AGAGTTGTTTCCACTCTCGAGACTTGTTCAAGGTCTTCATCAGGGTCCTTGAATTACAGCGGTGGGCGATaGCCCAGCTCCTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: RVVSTLETCSRSSSGSLNYSGGR*PSSSAT
Trigger: GGTGGCAGAGGAGCTGGGGCATCGCCCACCGCTGTA...ATTCAAGGACCCTGATGAAGACCTTGAACAAGTCTCGAGAGTGGAAACAACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR GCA 90 bp AGACCACGTGCAAGTTTCCAGTTGTCATTTCACAGTGGAGTTTTACAGACAGTGCTGTTCGGACGCGCATaGGCACTGGGGCGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RPRASFQLSFHSGVLQTVLFGRA*ALGRQL
Trigger: CAGCTGACGCCCCAGTGCGCATGCGCGTCCGAACAG...CACTGTCTGTAAAACTCCACTGTGAAATGACAACTGGAAACTTGCACGTGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396078.7
CDS-3UTR CCA 90 bp GGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTGAGAGCTGGCTACAGCGGTaGGCGATGCCCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GANDRVSNISNNRKIVVESWLQR*AMPQLL
Trigger: GAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCT...CTCAACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp TCCAAATTCTGCTGTGCTAAGCGGCTTAAACTATGCAGCTGGCTACAGCGGTGGGCAACCTTGGCCTCCTaGGCTCAAGTGATCCTCCTA +
Preference number: 4 (lower is better)
Translates to: SKFCCAKRLKLCSWLQRWATLAS*AQVILL
Trigger: TAGGAGGATCACTTGAGCCCAGGAGGCCAAGGTTGC...CCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTTAGCACAGCAGAATTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp CTGAATCCAGAGATCAGGTCTCTCGGCTGTGCTGGGGACACCATCAACCACTTGTTCTGTTGCTCAGGCTaGAGGGCAATGGTGCAATCT +
Preference number: 4 (lower is better)
Translates to: LNPEIRSLGCAGDTINHLFCCSG*RAMVQS
Trigger: AGATTGCACCATTGCCCTCCAGCCTGAGCAACAGAA...CAAGTGGTTGATGGTGTCCCCAGCACAGCCGAGAGACCTGATCTCTGGATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR CCA 90 bp TCCCATTTGATGGGCCTGTCAGGCATCCTTTTAGCTTCTTTGAGAGGCTGGGTACTGCACTCCAGAGCTTaGGTGACAGAGCGAGACTCC +
Preference number: 4 (lower is better)
Translates to: SHLMGLSGILLASLRGWVLHSRA*VTERDS
Trigger: GGAGTCTCGCTCTGTCACCCAAGCTCTGGAGTGCAG...TACCCAGCCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCCCATCAAATGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431657.5
CDS-3UTR TCA 90 bp GACCTTTCTTTGGAATGTGCAAGGTTTAAGCAACCCAAGCTTGCTGAGTTAACCCTGAGCCCCCAACCCTaGATTCTCAGCTGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: DLSLECARFKQPKLAELTLSPQP*ILSWAL
Trigger: GAGGGCCCAGCTGAGAATTCAGGGTTGGGGGCTCAG...GGTTAACTCAGCAAGCTTGGGTTGCTTAAACCTTGCACATTCCAAAGAAAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396078.7
CDS-3UTR TCA 90 bp AGCATAAACTATCTGGCATGGTCAAAGGCCTCAGGCAAACAGAAACATTCCTATGTGGGCGACAGGCTTTaGCGGGCTCCTAGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: SINYLAWSKASGKQKHSYVGDRL*RAPSRS
Trigger: ACTGCGGCTAGGAGCCCGTCAAAGCCTGTCGCCCAC...ATAGGAATGTTTCTGTTTGCCTGAGGCCTTTGACCATGCCAGATAGTTTATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396078.7
CDS-3UTR CCA 90 bp ACTCTGAGGGGCTTTAACCAGGCCGGGGCTAATGACAGGGTTTCAAACATCAGTCCATTAATTGAGTTCTaGCAAGGGTCCGACGCGAGG +
Preference number: 4 (lower is better)
Translates to: TLRGFNQAGANDRVSNISPLIEF*QGSDAR
Trigger: CCTCGCGTCGGACCCTTGCCAGAACTCAATTAATGG...ACTGATGTTTGAAACCCTGTCATTAGCCCCGGCCTGGTTAAAGCCCCTCAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp GCCGGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTGCCTCCCTAAGTAGCTaGGACCGCAGGCATGAGCCA +
Preference number: 4 (lower is better)
Translates to: AGANDRVSNISNNRKIVVASLSS*DRRHEP
Trigger: TGGCTCATGCCTGCGGTCCCAGCTACTTAGGGAGGC...AACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp CGTGCAAGTTTCCAGTTGTCATTTCACAGTGGAGTTTTACAGACAGTGCTTAATGACGCGCATGCGCACTaGGGCGTCAGCTGGCCAACC +
Preference number: 4 (lower is better)
Translates to: RASFQLSFHSGVLQTVLNDAHAH*GVSWPT
Trigger: GGTTGGCCAGCTGACGCCCCAGTGCGCATGCGCGTC...ATTAAGCACTGTCTGTAAAACTCCACTGTGAAATGACAACTGGAAACTTGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396078.7
CDS-3UTR TCA 90 bp GTAGCCAGTCAAAGGTCAGCACTGGGGTCAGACCTTTCTTTGGAATGTGCAAGGGAGGCATCCATTAATTaGGTTCTGGCAAGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: VASQRSALGSDLSLECAREASIN*VLARVR
Trigger: TCGGACCCTTGCCAGAACTCAATTAATGGATGCCTC...CCTTGCACATTCCAAAGAAAGGTCTGACCCCAGTGCTGACCTTTGACTGGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396078.7
CDS-3UTR TCA 90 bp TCCAAATTCTGCTGTGCTAAGCGGCTTAAACTATGCAGCTGGCTACAGCGGTGGGAGGCATCCATTAATTaGGTTCTGGCAAGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: SKFCCAKRLKLCSWLQRWEASIN*VLARVR
Trigger: TCGGACCCTTGCCAGAACTCAATTAATGGATGCCTC...CCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTTAGCACAGCAGAATTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR TCA 90 bp CTGAATCCAGAGATCAGGTCTCTCGGCTGTGCTGGGGACACCATCAACCACTTGTGTCCTCTTCAGAAATaGCCTGAAGAGCTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: LNPEIRSLGCAGDTINHLCPLQK*PEELLG
Trigger: ACCCAAAAGCTCTTCAGGTCATTTCTGAAGAGGACA...CAAGTGGTTGATGGTGTCCCCAGCACAGCCGAGAGACCTGATCTCTGGATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR GCA 90 bp CTGAATCCAGAGATCAGGTCTCTCGGCTGTGCTGGGGACACCATCAACCACTTGAAACCACTGGAGATTTaGTGGATCACAGAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: LNPEIRSLGCAGDTINHLKPLEI*WITECW
Trigger: CCAACACTCTGTGATCCAGCAAATCTCCAGTGGTTT...CAAGTGGTTGATGGTGTCCCCAGCACAGCCGAGAGACCTGATCTCTGGATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR GCA 90 bp TCTGCTGTGCTAAGCGGCTTAAACTATGCAGCTGGCTACAGCGGTGGGCGATGCATTGACTTAAAGCTTTaGTGCCCCCAAAGACACACT +
Preference number: 4 (lower is better)
Translates to: SAVLSGLNYAAGYSGGRCIDLKL*CPQRHT
Trigger: AGTGTGTCTTTGGGGGCAGCAAAGCTTTAAGTCAAT...GCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTTAGCACAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431657.5
CDS-3UTR CCA 90 bp GTTCCTAGCATCACATGGCCCACTGCACTCATGCCAGAACGGTCTGTAAATATGCCATTAATTGAGTTCTaGCAAGGGTCCGACGCGAGG +
Preference number: 4 (lower is better)
Translates to: VPSITWPTALMPERSVNMPLIEF*QGSDAR
Trigger: CCTCGCGTCGGACCCTTGCCAGAACTCAATTAATGG...CATATTTACAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CCA 90 bp GTTCCTAGCATCACATGGCCCACTGCACTCATGCCAGAACGGTCTGTAAATATGCTTAAACTATGCAGCTaGCTACAGCGGTGGGCGATG +
Preference number: 4 (lower is better)
Translates to: VPSITWPTALMPERSVNMLKLCS*LQRWAM
Trigger: CATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAG...CATATTTACAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CCA 90 bp TCCCATTTGATGGGCCTGTCAGGCATCCTTTTAGCTTCTTTGAGAGGCTGGGTACTTAAACTATGCAGCTaGCTACAGCGGTGGGCGATG +
Preference number: 4 (lower is better)
Translates to: SHLMGLSGILLASLRGWVLKLCS*LQRWAM
Trigger: CATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAG...TACCCAGCCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCCCATCAAATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CCA 90 bp TCCCATTTGATGGGCCTGTCAGGCATCCTTTTAGCTTCTTTGAGAGGCTGGGTAGTTCCTAGCATCACATaGCCCACTGCACTCATGCCA +
Preference number: 4 (lower is better)
Translates to: SHLMGLSGILLASLRGWVVPSIT*PTALMP
Trigger: TGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAAC...TACCCAGCCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCCCATCAAATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CCA 90 bp GGCTGTGCTGGGGACACCATCAACCACTTGGGGTTGAATTCTATTGCTATGAATGTCTCTCGGCTGTGCTaGGGACACCATCAACCACTT +
Preference number: 4 (lower is better)
Translates to: GCAGDTINHLGLNSIAMNVSRLC*GHHQPL
Trigger: AAGTGGTTGATGGTGTCCCCAGCACAGCCGAGAGAC...ATTCATAGCAATAGAATTCAACCCCAAGTGGTTGATGGTGTCCCCAGCACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR TCA 90 bp CCAGTCAAAGGTCAGCACTGGGGTCAGACCTTTCTTTGGAATGTGCAAGGTTTAAAGGCCTCAAGGCATTaGCTGCTTCAGCTCCCGATA +
Preference number: 4 (lower is better)
Translates to: PVKGQHWGQTFLWNVQGLKASRH*LLQLPI
Trigger: TATCGGGAGCTGAAGCAGTCAATGCCTTGAGGCCTT...TAAACCTTGCACATTCCAAAGAAAGGTCTGACCCCAGTGCTGACCTTTGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR TCA 90 bp TCCAAATTCTGCTGTGCTAAGCGGCTTAAACTATGCAGCTGGCTACAGCGGTGGAGCTCCTCTGCCACCTaGTATCTGAGAGTTGCAATT +
Preference number: 4 (lower is better)
Translates to: SKFCCAKRLKLCSWLQRWSSSAT*YLRVAI
Trigger: AATTGCAACTCTCAGATATCAGGTGGCAGAGGAGCT...CCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTTAGCACAGCAGAATTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR TCA 90 bp TCCATTGTTCCTAGCATCACATGGCCCACTGCACTCATGCCAGAACGGTCTGTAAGCTCCTCTGCCACCTaGTATCTGAGAGTTGCAATT +
Preference number: 4 (lower is better)
Translates to: SIVPSITWPTALMPERSVSSSAT*YLRVAI
Trigger: AATTGCAACTCTCAGATATCAGGTGGCAGAGGAGCT...TACAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAACAATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR TCA 90 bp CATCCATTGTTCCTAGCATCACATGGCCCACTGCACTCATGCCAGAACGGTCTGTTCTCTCTTGCCTGCTaGGCTTTGGTGAGAATAAAC +
Preference number: 4 (lower is better)
Translates to: HPLFLASHGPLHSCQNGLFSLAC*ALVRIN
Trigger: GTTTATTCTCACCAAAGCTCAGCAGGCAAGAGAGAA...CAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAACAATGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR TCA 90 bp TATCTGGCATGGTCAAAGGCCTCAGGCAAACAGAAACATTCCTATCCAGGGGCTGGAGCACACATTAACTaGTGTTGTAGGGGAGTGGTC +
Preference number: 4 (lower is better)
Translates to: YLAWSKASGKQKHSYPGAGAHIN*CCRGVV
Trigger: GACCACTCCCCTACAACATCAGTTAATGTGTGCTCC...AGCCCCTGGATAGGAATGTTTCTGTTTGCCTGAGGCCTTTGACCATGCCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR GCA 90 bp GTAGCCAGTCAAAGGTCAGCACTGGGGTCAGACCTTTCTTTGGAATGTGCAAGGTCCCTTTCTACGGGGTaGTGTCCAAAGAAATCTGGA +
Preference number: 4 (lower is better)
Translates to: VASQRSALGSDLSLECARSLSTG*CPKKSG
Trigger: TCCAGATTTCTTTGGACAGCACCCCGTAGAAAGGGA...CCTTGCACATTCCAAAGAAAGGTCTGACCCCAGTGCTGACCTTTGACTGGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR GCA 90 bp GCCGGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTCATCACATGGCCCACTaGACTCATGCCAGAACGGTC +
Preference number: 4 (lower is better)
Translates to: AGANDRVSNISNNRKIVVHHMAH*THARTV
Trigger: GACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATG...AACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR GCA 90 bp CATTCAGTAGCAAGAGCCCAAAAATGGTGTTCCAAGCCAAGATTCACCTTGTCCCATCACATGGCCCACTaGACTCATGCCAGAACGGTC +
Preference number: 4 (lower is better)
Translates to: HSVARAQKWCSKPRFTLSHHMAH*THARTV
Trigger: GACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATG...GGACAAGGTGAATCTTGGCTTGGAACACCATTTTTGGGCTCTTGCTACTGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR CCA 90 bp CCAGTCAAAGGTCAGCACTGGGGTCAGACCTTTCTTTGGAATGTGCAAGGTTTACCATTAATTGAGTTCTaGCAAGGGTCCGACGCGAGG +
Preference number: 4 (lower is better)
Translates to: PVKGQHWGQTFLWNVQGLPLIEF*QGSDAR
Trigger: CCTCGCGTCGGACCCTTGCCAGAACTCAATTAATGG...TAAACCTTGCACATTCCAAAGAAAGGTCTGACCCCAGTGCTGACCTTTGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396078.7
CDS-3UTR CCA 90 bp GCCGGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTGTCTCTCGGCTGTGCTaGGGACACCATCAACCACTT +
Preference number: 4 (lower is better)
Translates to: AGANDRVSNISNNRKIVVVSRLC*GHHQPL
Trigger: AAGTGGTTGATGGTGTCCCCAGCACAGCCGAGAGAC...AACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
3UTR CAA 72 bp GCCAGTCAAAGGTCAGCACTGGGGTCAGACCTTTCTTaGGAATGTGCAAGGTTTAAGCAACCCAAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: ASQRSALGSDLS*ECARFKQPKLA
Trigger: AGCAAGCTTGGGTTGCTTAAACCTTGCACATTCCAAAGAAAGGTCTGACCCCAGTGCTGACCTTTGACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR TCA 90 bp GGCTGTGCTGGGGACACCATCAACCACTTGGGGTTGAATTCTATTGCTATGAATGAGGCATCCATTAATTaGGTTCTGGCAAGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: GCAGDTINHLGLNSIAMNEASIN*VLARVR
Trigger: TCGGACCCTTGCCAGAACTCAATTAATGGATGCCTC...ATTCATAGCAATAGAATTCAACCCCAAGTGGTTGATGGTGTCCCCAGCACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR TCA 90 bp CATTCAGTAGCAAGAGCCCAAAAATGGTGTTCCAAGCCAAGATTCACCTTGTCCAAGGCCTCAAGGCATTaGCTGCTTCAGCTCCCGATA +
Preference number: 4 (lower is better)
Translates to: HSVARAQKWCSKPRFTLSKASRH*LLQLPI
Trigger: TATCGGGAGCTGAAGCAGTCAATGCCTTGAGGCCTT...GGACAAGGTGAATCTTGGCTTGGAACACCATTTTTGGGCTCTTGCTACTGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR TCA 90 bp GTCCCATTTGATGGGCCTGTCAGGCATCCTTTTAGCTTCTTTGAGAGGCTGGGTAGTTTTGTCCAGTGGTaGTGGACATCCATTGTTCCT +
Preference number: 4 (lower is better)
Translates to: VPFDGPVRHPFSFFERLGSFVQW*WTSIVP
Trigger: AGGAACAATGGATGTCCATCACCACTGGACAAAACT...ACCCAGCCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCCCATCAAATGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR TCA 90 bp GGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTGAGCCTCCTGGGCTCAAGTaGTCCTCCTATCTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: GANDRVSNISNNRKIVVEPPGLK*SSYLSL
Trigger: GAGGCTAAGATAGGAGGATCACTTGAGCCCAGGAGG...CTCAACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR TCA 90 bp CCTCAAAAGTACAGCAACATTGACTTAAAGCTTTGCTGCCCCCAAAGACACACTCCTCCTGGGCTCAAGTaGTCCTCCTATCTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: PQKYSNIDLKLCCPQRHTPPGLK*SSYLSL
Trigger: GAGGCTAAGATAGGAGGATCACTTGAGCCCAGGAGG...AGTGTGTCTTTGGGGGCAGCAAAGCTTTAAGTCAATGTTGCTGTACTTTTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431657.5
CDS-3UTR TCA 90 bp TCCCTGGAGAGACTGGGTGAGGAGTTGTCTTCAACATACTTCAGCATTCTTCAGCCTGGAGAGACTGGGTaGGGAGTTGTCTTCAACATA +
Preference number: 4 (lower is better)
Translates to: SLERLGEELSSTYFSILQPGETG*GVVFNI
Trigger: TATGTTGAAGACAACTCCTCACCCAGTCTCTCCAGG...CTGAAGAATGCTGAAGTATGTTGAAGACAACTCCTCACCCAGTCTCTCCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444602.2
CDS-3UTR GCA 90 bp ACCATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAATACAGCGGTGGGCGATaGCCCAGCTCCTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: TILHLILFLRALWETGKQYSGGR*PSSSAT
Trigger: GGTGGCAGAGGAGCTGGGGCATCGCCCACCGCTGTA...TTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR GCA 90 bp TTATTTGGTCTTCTAAAATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCATACAGCGGTGGGCGATaGCCCAGCTCCTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: LFGLLKSSASSEGQNNLAYSGGR*PSSSAT
Trigger: GGTGGCAGAGGAGCTGGGGCATCGCCCACCGCTGTA...TGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATTTTAGAAGACCAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR GCA 90 bp CATTCAGTAGCAAGAGCCCAAAAATGGTGTTCCAAGCCAAGATTCACCTTGTCCAAGCGGCTTAAACTATaGAGCTGGCTACAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: HSVARAQKWCSKPRFTLSKRLKL*SWLQRW
Trigger: CCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTT...GGACAAGGTGAATCTTGGCTTGGAACACCATTTTTGGGCTCTTGCTACTGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR GCA 90 bp GCCGGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTAAGCGGCTTAAACTATaGAGCTGGCTACAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: AGANDRVSNISNNRKIVVKRLKL*SWLQRW
Trigger: CCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTT...AACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR GCA 90 bp TCCATTGTTCCTAGCATCACATGGCCCACTGCACTCATGCCAGAACGGTCTGTAAAACCACTGGAGATTTaGTGGATCACAGAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SIVPSITWPTALMPERSVKPLEI*WITECW
Trigger: CCAACACTCTGTGATCCAGCAAATCTCCAGTGGTTT...TACAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAACAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp GGCTGTGCTGGGGACACCATCAACCACTTGGGGTTGAATTCTATTGCTATGAATGTACTAAAAGGTTCCTaGCCATCGGAGGAACTCTGG +
Preference number: 4 (lower is better)
Translates to: GCAGDTINHLGLNSIAMNVLKGS*PSEELW
Trigger: CCAGAGTTCCTCCGATGGCCAGGAACCTTTTAGTAC...ATTCATAGCAATAGAATTCAACCCCAAGTGGTTGATGGTGTCCCCAGCACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp TCCCTGGAGAGACTGGGTGAGGAGTTGTCTTCAACATACTTCAGCATTCTTCAGGTACTAAAAGGTTCCTaGCCATCGGAGGAACTCTGG +
Preference number: 4 (lower is better)
Translates to: SLERLGEELSSTYFSILQVLKGS*PSEELW
Trigger: CCAGAGTTCCTCCGATGGCCAGGAACCTTTTAGTAC...CTGAAGAATGCTGAAGTATGTTGAAGACAACTCCTCACCCAGTCTCTCCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444602.2
CDS-3UTR CCA 90 bp CATTCAGTAGCAAGAGCCCAAAAATGGTGTTCCAAGCCAAGATTCACCTTGTCCCTTAAACTATGCAGCTaGCTACAGCGGTGGGCGATG +
Preference number: 4 (lower is better)
Translates to: HSVARAQKWCSKPRFTLSLKLCS*LQRWAM
Trigger: CATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAG...GGACAAGGTGAATCTTGGCTTGGAACACCATTTTTGGGCTCTTGCTACTGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR CCA 90 bp ACTCTGAGGGGCTTTAACCAGGCCGGGGCTAATGACAGGGTTTCAAACATCAGTCCACTGGAGATTTGCTaGATCACAGAGTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: TLRGFNQAGANDRVSNISPLEIC*ITECWN
Trigger: ATTCCAACACTCTGTGATCCAGCAAATCTCCAGTGG...ACTGATGTTTGAAACCCTGTCATTAGCCCCGGCCTGGTTAAAGCCCCTCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp TCCAAATTCTGCTGTGCTAAGCGGCTTAAACTATGCAGCTGGCTACAGCGGTGGCCACTGGAGATTTGCTaGATCACAGAGTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: SKFCCAKRLKLCSWLQRWPLEIC*ITECWN
Trigger: ATTCCAACACTCTGTGATCCAGCAAATCTCCAGTGG...CCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTTAGCACAGCAGAATTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp TCCAAATTCTGCTGTGCTAAGCGGCTTAAACTATGCAGCTGGCTACAGCGGTGGGAGTTCATGCAAGCTTaGAGCATATCTGTCACTGCA +
Preference number: 4 (lower is better)
Translates to: SKFCCAKRLKLCSWLQRWEFMQA*SISVTA
Trigger: TGCAGTGACAGATATGCTCCAAGCTTGCATGAACTC...CCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTTAGCACAGCAGAATTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431657.5
CDS-3UTR TCA 90 bp GGCCTGTCAGGCATCCTTTTAGCTTCTTTGAGAGGCTGGGTATGCATATTAGTAGAGGCATCCATTAATTaGGTTCTGGCAAGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: GLSGILLASLRGWVCILVEASIN*VLARVR
Trigger: TCGGACCCTTGCCAGAACTCAATTAATGGATGCCTC...TACTAATATGCATACCCAGCCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR TCA 90 bp CTGAATCCAGAGATCAGGTCTCTCGGCTGTGCTGGGGACACCATCAACCACTTGATAAACTGCAGGAGTTaGGAATATATAACACTGTGC +
Preference number: 4 (lower is better)
Translates to: LNPEIRSLGCAGDTINHLINCRS*EYITLC
Trigger: GCACAGTGTTATATATTCTCAACTCCTGCAGTTTAT...CAAGTGGTTGATGGTGTCCCCAGCACAGCCGAGAGACCTGATCTCTGGATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342649.9
CDS-3UTR TCA 90 bp TCCCATTTGATGGGCCTGTCAGGCATCCTTTTAGCTTCTTTGAGAGGCTGGGTAAGTTTTGTCCAGTGGTaGTGGACATCCATTGTTCCT +
Preference number: 4 (lower is better)
Translates to: SHLMGLSGILLASLRGWVSFVQW*WTSIVP
Trigger: AGGAACAATGGATGTCCATCACCACTGGACAAAACT...TACCCAGCCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCCCATCAAATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR TCA 90 bp CCTCAGGCAAACAGAAACATTCCTATCCAGGGGCTCAGAGCTCATTTCCCAGTAAGCAAAGGGAAAAGGTaGATAGAGCAGAATCAGGAG +
Preference number: 4 (lower is better)
Translates to: PQANRNIPIQGLRAHFPVSKGKR*IEQNQE
Trigger: CTCCTGATTCTGCTCTATTCACCTTTTCCCTTTGCT...TACTGGGAAATGAGCTCTGAGCCCCTGGATAGGAATGTTTCTGTTTGCCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR TCA 90 bp TATCTGGCATGGTCAAAGGCCTCAGGCAAACAGAAACATTCCTATCCAGGGGCTAGCAAAGGGAAAAGGTaGATAGAGCAGAATCAGGAG +
Preference number: 4 (lower is better)
Translates to: YLAWSKASGKQKHSYPGASKGKR*IEQNQE
Trigger: CTCCTGATTCTGCTCTATTCACCTTTTCCCTTTGCT...AGCCCCTGGATAGGAATGTTTCTGTTTGCCTGAGGCCTTTGACCATGCCAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR GCA 90 bp CCAGTCAAAGGTCAGCACTGGGGTCAGACCTTTCTTTGGAATGTGCAAGGTTTATCCCTTTCTACGGGGTaGTGTCCAAAGAAATCTGGA +
Preference number: 4 (lower is better)
Translates to: PVKGQHWGQTFLWNVQGLSLSTG*CPKKSG
Trigger: TCCAGATTTCTTTGGACAGCACCCCGTAGAAAGGGA...TAAACCTTGCACATTCCAAAGAAAGGTCTGACCCCAGTGCTGACCTTTGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR GCA 90 bp CACATGGCCCACTGCACTCATGCCAGAACGGTCTGTAAATATGATTGTACACCCAAATGCCCGAGTTCATaGAAGCTTGGAGCATATCTG +
Preference number: 4 (lower is better)
Translates to: HMAHCTHARTVCKYDCTPKCPSS*KLGAYL
Trigger: CAGATATGCTCCAAGCTTGCATGAACTCGGGCATTT...GGGTGTACAATCATATTTACAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR GCA 90 bp CACATGGCCCACTGCACTCATGCCAGAACGGTCTGTAAATATGATTGTACACCCGACTTAAAGCTTTGCTaGCCCCAAAGACACACTTCT +
Preference number: 4 (lower is better)
Translates to: HMAHCTHARTVCKYDCTPDLKLC*PQRHTS
Trigger: AGAAGTGTGTCTTTGGGGGCAGCAAAGCTTTAAGTC...GGGTGTACAATCATATTTACAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431657.5
CDS-3UTR CCA 90 bp TCTAACCAGGATGTGAGAGTTGTTTCCACTCTCGAGACTTGTTCAAGGTCTTCAGTTCCTAGCATCACATaGCCCACTGCACTCATGCCA +
Preference number: 4 (lower is better)
Translates to: SNQDVRVVSTLETCSRSSVPSIT*PTALMP
Trigger: TGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAAC...TGAAGACCTTGAACAAGTCTCGAGAGTGGAAACAACTCTCACATCCTGGTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000417768.1
CDS-3UTR CCA 90 bp ACTCTGAGGGGCTTTAACCAGGCCGGGGCTAATGACAGGGTTTCAAACATCAGTGTGAGAATAAACCACTaGAGATTTGCTGGATCACAG +
Preference number: 4 (lower is better)
Translates to: TLRGFNQAGANDRVSNISVRINH*RFAGSQ
Trigger: CTGTGATCCAGCAAATCTCCAGTGGTTTATTCTCAC...ACTGATGTTTGAAACCCTGTCATTAGCCCCGGCCTGGTTAAAGCCCCTCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp TTTGGTCTTCTAAAATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCAATCGCCTCCCTAAGTAGCTaGGACCGCAGGCATGAGCCA +
Preference number: 4 (lower is better)
Translates to: FGLLKSSASSEGQNNLAIASLSS*DRRHEP
Trigger: TGGCTCATGCCTGCGGTCCCAGCTACTTAGGGAGGC...GATTGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATTTTAGAAGACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp TCACTTCAGCTACTCAGTCTCAGCTCCCCAAATACCCAAGGTCAAATTAATACAGTATCCATAGGGGATTaGTTCCAGGACCTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: SLQLLSLSSPNTQGQINTVSIGD*FQDLPW
Trigger: CCACGGGAGGTCCTGGAACCAATCCCCTATGGATAC...TGTATTAATTTGACCTTGGGTATTTGGGGAGCTGAGACTGAGTAGCTGAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR TCA 90 bp TCACTTCAGCTACTCAGTCTCAGCTCCCCAAATACCCAAGGTCAAATTAATACAAAGGCCTCAAGGCATTaGCTGCTTCAGCTCCCGATA +
Preference number: 4 (lower is better)
Translates to: SLQLLSLSSPNTQGQINTKASRH*LLQLPI
Trigger: TATCGGGAGCTGAAGCAGTCAATGCCTTGAGGCCTT...TGTATTAATTTGACCTTGGGTATTTGGGGAGCTGAGACTGAGTAGCTGAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR TCA 90 bp GGCTGTGCTGGGGACACCATCAACCACTTGGGGTTGAATTCTATTGCTATGAATCTGCCACCTGATATCTaGGAGTTGCAATTGATGAGA +
Preference number: 4 (lower is better)
Translates to: GCAGDTINHLGLNSIAMNLPPDI*ELQLMR
Trigger: TCTCATCAATTGCAACTCTCAGATATCAGGTGGCAG...ATTCATAGCAATAGAATTCAACCCCAAGTGGTTGATGGTGTCCCCAGCACAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR TCA 90 bp GCCGGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTAGCTCCTCTGCCACCTaGTATCTGAGAGTTGCAATT +
Preference number: 4 (lower is better)
Translates to: AGANDRVSNISNNRKIVVSSSAT*YLRVAI
Trigger: AATTGCAACTCTCAGATATCAGGTGGCAGAGGAGCT...AACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCCGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR TCA 90 bp TCCATTGTTCCTAGCATCACATGGCCCACTGCACTCATGCCAGAACGGTCTGTACGCAAACTTCGAGGGTaGAATAGTATTCTACTTTTC +
Preference number: 4 (lower is better)
Translates to: SIVPSITWPTALMPERSVRKLRG*NSILLF
Trigger: GAAAAGTAGAATACTATTTCACCCTCGAAGTTTGCG...TACAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAACAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR TCA 90 bp GACTTGTTCAAGGTCTTCATCAGGGTCCTTGAATCCAGTAAAGGAGTAATAAGACCTCCTGGGCTCAAGTaGTCCTCCTATCTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: DLFKVFIRVLESSKGVIRPPGLK*SSYLSL
Trigger: GAGGCTAAGATAGGAGGATCACTTGAGCCCAGGAGG...TCTTATTACTCCTTTACTGGATTCAAGGACCCTGATGAAGACCTTGAACAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR TCA 90 bp TCCATTGTTCCTAGCATCACATGGCCCACTGCACTCATGCCAGAACGGTCTGTATGTTTTCCATTGGATTaGCTTTGCCCAGTAAATCTG +
Preference number: 4 (lower is better)
Translates to: SIVPSITWPTALMPERSVCFPLD*LCPVNL
Trigger: CAGATTTACTGGGCAAAGTCAATCCAATGGAAAACA...TACAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAACAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431657.5
CDS-3UTR TCA 90 bp TCCCATTTGATGGGCCTGTCAGGCATCCTTTTAGCTTCTTTGAGAGGCTGGGTAAAAGTACAGCAACATTaGCTTAAAGCTTTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SHLMGLSGILLASLRGWVKVQQH*LKALLP
Trigger: GGGCAGCAAAGCTTTAAGTCAATGTTGCTGTACTTT...TACCCAGCCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCCCATCAAATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431657.5
CDS-3UTR GCA 90 bp GACTTGTTCAAGGTCTTCATCAGGGTCCTTGAATCCAGTAAAGGAGTAATAAGACATCACATGGCCCACTaGACTCATGCCAGAACGGTC +
Preference number: 4 (lower is better)
Translates to: DLFKVFIRVLESSKGVIRHHMAH*THARTV
Trigger: GACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATG...TCTTATTACTCCTTTACTGGATTCAAGGACCCTGATGAAGACCTTGAACAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR GCA 90 bp AGACTTGTCCCATTTGATGGGCCTGTCAGGCATCCTTTTAGCTTCTTTGAGAGGAAACCACTGGAGATTTaGTGGATCACAGAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: RLVPFDGPVRHPFSFFERKPLEI*WITECW
Trigger: CCAACACTCTGTGATCCAGCAAATCTCCAGTGGTTT...CCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCCCATCAAATGGGACAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR GCA 90 bp AGACTTGTCCCATTTGATGGGCCTGTCAGGCATCCTTTTAGCTTCTTTGAGAGGTTTCATGTTCTCTCTTaGCTGCTGAGCTTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: RLVPFDGPVRHPFSFFERFHVLS*LLSFGE
Trigger: CTCACCAAAGCTCAGCAGGCAAGAGAGAACATGAAA...CCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCCCATCAAATGGGACAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp ATTCATTCAGTAGCAAGAGCCCAAAAATGGTGTTCCAAGCCAAGATTCACCTTGCCATTAATTGAGTTCTaGCAAGGGTCCGACGCGAGG +
Preference number: 4 (lower is better)
Translates to: IHSVARAQKWCSKPRFTLPLIEF*QGSDAR
Trigger: CCTCGCGTCGGACCCTTGCCAGAACTCAATTAATGG...CAAGGTGAATCTTGGCTTGGAACACCATTTTTGGGCTCTTGCTACTGAATGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR CCA 90 bp AGAGTTGTTTCCACTCTCGAGACTTGTTCAAGGTCTTCATCAGGGTCCTTGAATGTACTAAAAGGTTCCTaGCCATCGGAGGAACTCTGG +
Preference number: 4 (lower is better)
Translates to: RVVSTLETCSRSSSGSLNVLKGS*PSEELW
Trigger: CCAGAGTTCCTCCGATGGCCAGGAACCTTTTAGTAC...ATTCAAGGACCCTGATGAAGACCTTGAACAAGTCTCGAGAGTGGAAACAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CCA 90 bp TCCAAATTCTGCTGTGCTAAGCGGCTTAAACTATGCAGCTGGCTACAGCGGTGGGCTTCTTTGAGAGGCTaGGTATGCATATTAGTATTC +
Preference number: 4 (lower is better)
Translates to: SKFCCAKRLKLCSWLQRWASLRG*VCILVF
Trigger: GAATACTAATATGCATACCCAGCCTCTCAAAGAAGC...CCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTTAGCACAGCAGAATTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CCA 90 bp TCCATTGTTCCTAGCATCACATGGCCCACTGCACTCATGCCAGAACGGTCTGTATGGATCACAGAGTGTTaGAATATTAAAATGCCCGAG +
Preference number: 4 (lower is better)
Translates to: SIVPSITWPTALMPERSVWITEC*NIKMPE
Trigger: CTCGGGCATTTTAATATTCCAACACTCTGTGATCCA...TACAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAACAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp TCCCATTTGATGGGCCTGTCAGGCATCCTTTTAGCTTCTTTGAGAGGCTGGGTAGTGAGAATAAACCACTaGAGATTTGCTGGATCACAG +
Preference number: 4 (lower is better)
Translates to: SHLMGLSGILLASLRGWVVRINH*RFAGSQ
Trigger: CTGTGATCCAGCAAATCTCCAGTGGTTTATTCTCAC...TACCCAGCCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCCCATCAAATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp ATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAAGGCGGCAATGGTGCAATCTaGGCCCACTGCAACCTTGGC +
Preference number: 4 (lower is better)
Translates to: ILHLILFLRALWETGKQGGNGAI*AHCNLG
Trigger: GCCAAGGTTGCAGTGGGCCCAGATTGCACCATTGCC...GCCTTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp CACATGGCCCACTGCACTCATGCCAGAACGGTCTGTAAATATGATTGTACACCCAAGCAAGGCTTTTCCTaGATAGTGTTTGCCCATGAA +
Preference number: 4 (lower is better)
Translates to: HMAHCTHARTVCKYDCTPKQGFS*IVFAHE
Trigger: TTCATGGGCAAACACTATCCAGGAAAAGCCTTGCTT...GGGTGTACAATCATATTTACAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
3UTR CAA 72 bp GAGACTCCATGTGAGAGTTGTTTCCACTCTCGAGACTaGTTCAAGGTCTTCATCAGGGTCCTTGAATCCAGT +
Preference number: 4 (lower is better)
Translates to: ETPCESCFHSRD*FKVFIRVLESS
Trigger: ACTGGATTCAAGGACCCTGATGAAGACCTTGAACAAGTCTCGAGAGTGGAAACAACTCTCACATGGAGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431657.5
CDS-3UTR TCA 90 bp CATATACTATCAAATACTAGTCCCTGGAGAGACTGGGTGAGGAGTTGTCTTCAAGAGGCATCCATTAATTaGGTTCTGGCAAGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: HILSNTSPWRDWVRSCLQEASIN*VLARVR
Trigger: TCGGACCCTTGCCAGAACTCAATTAATGGATGCCTC...TTGAAGACAACTCCTCACCCAGTCTCTCCAGGGACTAGTATTTGATAGTATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444602.2
CDS-3UTR TCA 90 bp ACTCTGAGGGGCTTTAACCAGGCCGGGGCTAATGACAGGGTTTCAAACATCAGTTTATCAGACTGCTTATaGCAATGTCAGTACCATACA +
Preference number: 4 (lower is better)
Translates to: TLRGFNQAGANDRVSNISLSDCL*QCQYHT
Trigger: TGTATGGTACTGACATTGTCATAAGCAGTCTGATAA...ACTGATGTTTGAAACCCTGTCATTAGCCCCGGCCTGGTTAAAGCCCCTCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR TCA 90 bp GTAGCCAGTCAAAGGTCAGCACTGGGGTCAGACCTTTCTTTGGAATGTGCAAGGAAATCACTAGGGCATTaGAAACTCTTCCATGTATCA +
Preference number: 4 (lower is better)
Translates to: VASQRSALGSDLSLECARKSLGH*KLFHVS
Trigger: TGATACATGGAAGAGTTTTCAATGCCCTAGTGATTT...CCTTGCACATTCCAAAGAAAGGTCTGACCCCAGTGCTGACCTTTGACTGGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR GCA 90 bp CATTCAGTAGCAAGAGCCCAAAAATGGTGTTCCAAGCCAAGATTCACCTTGTCCAAATGCCCGAGTTCATaGAAGCTTGGAGCATATCTG +
Preference number: 4 (lower is better)
Translates to: HSVARAQKWCSKPRFTLSKCPSS*KLGAYL
Trigger: CAGATATGCTCCAAGCTTGCATGAACTCGGGCATTT...GGACAAGGTGAATCTTGGCTTGGAACACCATTTTTGGGCTCTTGCTACTGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR GCA 90 bp GGCCTGTCAGGCATCCTTTTAGCTTCTTTGAGAGGCTGGGTATGCATATTAGTAAAATGCCCGAGTTCATaGAAGCTTGGAGCATATCTG +
Preference number: 4 (lower is better)
Translates to: GLSGILLASLRGWVCILVKCPSS*KLGAYL
Trigger: CAGATATGCTCCAAGCTTGCATGAACTCGGGCATTT...TACTAATATGCATACCCAGCCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR GCA 90 bp ACTCTGAGGGGCTTTAACCAGGCCGGGGCTAATGACAGGGTTTCAAACATCAGTGTTGGAATATTAAAATaGCCGAGTTCATGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: TLRGFNQAGANDRVSNISVGILK*PSSCKL
Trigger: AAGCTTGCATGAACTCGGGCATTTTAATATTCCAAC...ACTGATGTTTGAAACCCTGTCATTAGCCCCGGCCTGGTTAAAGCCCCTCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp GTAGCCAGTCAAAGGTCAGCACTGGGGTCAGACCTTTCTTTGGAATGTGCAAGGCTCATAGGTCTCAGGTaGCAAAACATTTCTGAATAT +
Preference number: 4 (lower is better)
Translates to: VASQRSALGSDLSLECARLIGLR*QNISEY
Trigger: ATATTCAGAAATGTTTTGCCACCTGAGACCTATGAG...CCTTGCACATTCCAAAGAAAGGTCTGACCCCAGTGCTGACCTTTGACTGGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR CCA 90 bp ACTCTGAGGGGCTTTAACCAGGCCGGGGCTAATGACAGGGTTTCAAACATCAGTCTCATAGGTCTCAGGTaGCAAAACATTTCTGAATAT +
Preference number: 4 (lower is better)
Translates to: TLRGFNQAGANDRVSNISLIGLR*QNISEY
Trigger: ATATTCAGAAATGTTTTGCCACCTGAGACCTATGAG...ACTGATGTTTGAAACCCTGTCATTAGCCCCGGCCTGGTTAAAGCCCCTCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp GTCCCATTTGATGGGCCTGTCAGGCATCCTTTTAGCTTCTTTGAGAGGCTGGGTAAATGTAAGCTGAGTTaGTTTCAAAGACTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: VPFDGPVRHPFSFFERLGKCKLS*FQRLEA
Trigger: GGCTTCAAGTCTTTGAAACCAACTCAGCTTACATTT...ACCCAGCCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCCCATCAAATGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CCA 90 bp TCCAAATTCTGCTGTGCTAAGCGGCTTAAACTATGCAGCTGGCTACAGCGGTGGAAATGTAAGCTGAGTTaGTTTCAAAGACTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: SKFCCAKRLKLCSWLQRWKCKLS*FQRLEA
Trigger: GGCTTCAAGTCTTTGAAACCAACTCAGCTTACATTT...CCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTTAGCACAGCAGAATTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CCA 90 bp GGCCTGTCAGGCATCCTTTTAGCTTCTTTGAGAGGCTGGGTATGCATATTAGTATTTCTTAGAGCTCTTTaGGAAACAGGCAAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: GLSGILLASLRGWVCILVFLRAL*ETGKQG
Trigger: GCCTTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAA...TACTAATATGCATACCCAGCCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp CATCCATTGTTCCTAGCATCACATGGCCCACTGCACTCATGCCAGAACGGTCTGACAAGAAATCCTGAATaGTCTGAACCATTTTACACT +
Preference number: 4 (lower is better)
Translates to: HPLFLASHGPLHSCQNGLTRNPE*SEPFYT
Trigger: AGTGTAAAATGGTTCAGACCATTCAGGATTTCTTGT...CAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAACAATGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
3UTR CAA 72 bp TTTCAAAAAGTTTTGTCCAGTGGTGATGGACATCCATaGTTCCTAGCATCACATGGCCCACTGCACTCATGC +
Preference number: 4 (lower is better)
Translates to: FQKVLSSGDGHP*FLASHGPLHSC
Trigger: GCATGAGTGCAGTGGGCCATGTGATGCTAGGAACAATGGATGTCCATCACCACTGGACAAAACTTTTTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR TCA 90 bp TTAACAGCACTTTTCCCATTGTTATCTAACCAGGATGTGAGAGTTGTTTCCACTAAGGCCTCAAGGCATTaGCTGCTTCAGCTCCCGATA +
Preference number: 4 (lower is better)
Translates to: LTALFPLLSNQDVRVVSTKASRH*LLQLPI
Trigger: TATCGGGAGCTGAAGCAGTCAATGCCTTGAGGCCTT...AGTGGAAACAACTCTCACATCCTGGTTAGATAACAATGGGAAAAGTGCTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000417768.1
CDS-3UTR TCA 90 bp GGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTGAGCTGCCACCTGATATCTaGGAGTTGCAATTGATGAGA +
Preference number: 4 (lower is better)
Translates to: GANDRVSNISNNRKIVVELPPDI*ELQLMR
Trigger: TCTCATCAATTGCAACTCTCAGATATCAGGTGGCAG...CTCAACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR TCA 90 bp GGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTGAGAGTTTTGTCCAGTGGTaGTGGACATCCATTGTTCCT +
Preference number: 4 (lower is better)
Translates to: GANDRVSNISNNRKIVVESFVQW*WTSIVP
Trigger: AGGAACAATGGATGTCCATCACCACTGGACAAAACT...CTCAACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR TCA 90 bp GGCTGTGCTGGGGACACCATCAACCACTTGGGGTTGAATTCTATTGCTATGAATCGCAAACTTCGAGGGTaGAATAGTATTCTACTTTTC +
Preference number: 4 (lower is better)
Translates to: GCAGDTINHLGLNSIAMNRKLRG*NSILLF
Trigger: GAAAAGTAGAATACTATTTCACCCTCGAAGTTTGCG...ATTCATAGCAATAGAATTCAACCCCAAGTGGTTGATGGTGTCCCCAGCACAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR GCA 90 bp GGCTGTGCTGGGGACACCATCAACCACTTGGGGTTGAATTCTATTGCTATGAATAGTGTTTCCAAATTCTaGTGTGCTAAGCGGCTTAAA +
Preference number: 4 (lower is better)
Translates to: GCAGDTINHLGLNSIAMNSVSKF*CAKRLK
Trigger: TTTAAGCCGCTTAGCACAGCAGAATTTGGAAACACT...ATTCATAGCAATAGAATTCAACCCCAAGTGGTTGATGGTGTCCCCAGCACAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR GCA 90 bp CAAAGGCCTCAGGCAAACAGAAACATTCCTATCCAGGGGCTCAGAGCTCATTTCACCGAAATCTGCGAATaGTCAAGTCTCTCATATAAA +
Preference number: 4 (lower is better)
Translates to: QRPQANRNIPIQGLRAHFTEICE*SSLSYK
Trigger: TTTATATGAGAGACTTGAGCATTCGCAGATTTCGGT...GAAATGAGCTCTGAGCCCCTGGATAGGAATGTTTCTGTTTGCCTGAGGCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR CCA 90 bp TCCCATTTGATGGGCCTGTCAGGCATCCTTTTAGCTTCTTTGAGAGGCTGGGTACTCATAGGTCTCAGGTaGCAAAACATTTCTGAATAT +
Preference number: 4 (lower is better)
Translates to: SHLMGLSGILLASLRGWVLIGLR*QNISEY
Trigger: ATATTCAGAAATGTTTTGCCACCTGAGACCTATGAG...TACCCAGCCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCCCATCAAATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CCA 90 bp GTCCCATTTGATGGGCCTGTCAGGCATCCTTTTAGCTTCTTTGAGAGGCTGGGTCTTGGGCAAAATTGGTaGTTATCTAATTTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: VPFDGPVRHPFSFFERLGLGQNW*LSNFCY
Trigger: GTAACAGAAATTAGATAACCACCAATTTTGCCCAAG...ACCCAGCCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCCCATCAAATGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp GCCGGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTAAGCAAGGCTTTTCCTaGATAGTGTTTGCCCATGAA +
Preference number: 4 (lower is better)
Translates to: AGANDRVSNISNNRKIVVKQGFS*IVFAHE
Trigger: TTCATGGGCAAACACTATCCAGGAAAAGCCTTGCTT...AACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCCGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp GGTAGATGGAGAAACTGCCAAGAAAAGGAATTTGTGACTCCTGATCTCCCATATTCAAATACTAGTCCCTaGAGAGACTGGGTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: GRWRNCQEKEFVTPDLPYSNTSP*RDWVRS
Trigger: ACTCCTCACCCAGTCTCTCCAGGGACTAGTATTTGA...ATATGGGAGATCAGGAGTCACAAATTCCTTTTCTTGGCAGTTTCTCCATCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444602.2
CDS-3UTR TCA 90 bp TTTACAGCATTCTTCAGTATACCTGTTCCTTCACAAAAGGGCTATGAATTGACTAAGGCCTCAAGGCATTaGCTGCTTCAGCTCCCGATA +
Preference number: 4 (lower is better)
Translates to: FTAFFSIPVPSQKGYELTKASRH*LLQLPI
Trigger: TATCGGGAGCTGAAGCAGTCAATGCCTTGAGGCCTT...AGTCAATTCATAGCCCTTTTGTGAAGGAACAGGTATACTGAAGAATGCTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444602.2
CDS-3UTR TCA 90 bp ATTCATTCAGTAGCAAGAGCCCAAAAATGGTGTTCCAAGCCAAGATTCACCTTGTTCTCTCTTGCCTGCTaGGCTTTGGTGAGAATAAAC +
Preference number: 4 (lower is better)
Translates to: IHSVARAQKWCSKPRFTLFSLAC*ALVRIN
Trigger: GTTTATTCTCACCAAAGCTCAGCAGGCAAGAGAGAA...CAAGGTGAATCTTGGCTTGGAACACCATTTTTGGGCTCTTGCTACTGAATGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR TCA 90 bp GGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTGAGAACAGAGTAAAAATGTaGAATGCAGAGGTGCATCCC +
Preference number: 4 (lower is better)
Translates to: GANDRVSNISNNRKIVVENRVKM*NAEVHP
Trigger: GGGATGCACCTCTGCATTTCACATTTTTACTCTGTT...CTCAACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR GCA 90 bp GGCTGTGCTGGGGACACCATCAACCACTTGGGGTTGAATTCTATTGCTATGAATCAAAGTAAATTTGACTaGTCGAAATCCGGAAGTACT +
Preference number: 4 (lower is better)
Translates to: GCAGDTINHLGLNSIAMNQSKFD*SKSGST
Trigger: AGTACTTCCGGATTTCGAGCAGTCAAATTTACTTTG...ATTCATAGCAATAGAATTCAACCCCAAGTGGTTGATGGTGTCCCCAGCACAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342649.9
CDS-3UTR GCA 90 bp GCCGGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTAGTGTTTCCAAATTCTaGTGTGCTAAGCGGCTTAAA +
Preference number: 4 (lower is better)
Translates to: AGANDRVSNISNNRKIVVSVSKF*CAKRLK
Trigger: TTTAAGCCGCTTAGCACAGCAGAATTTGGAAACACT...AACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCCGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp CCAGTCAAAGGTCAGCACTGGGGTCAGACCTTTCTTTGGAATGTGCAAGGTTTACTCATAGGTCTCAGGTaGCAAAACATTTCTGAATAT +
Preference number: 4 (lower is better)
Translates to: PVKGQHWGQTFLWNVQGLLIGLR*QNISEY
Trigger: ATATTCAGAAATGTTTTGCCACCTGAGACCTATGAG...TAAACCTTGCACATTCCAAAGAAAGGTCTGACCCCAGTGCTGACCTTTGACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR CCA 90 bp TCCCTGGAGAGACTGGGTGAGGAGTTGTCTTCAACATACTTCAGCATTCTTCAGAAATGTAAGCTGAGTTaGTTTCAAAGACTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: SLERLGEELSSTYFSILQKCKLS*FQRLEA
Trigger: GGCTTCAAGTCTTTGAAACCAACTCAGCTTACATTT...CTGAAGAATGCTGAAGTATGTTGAAGACAACTCCTCACCCAGTCTCTCCAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444602.2
CDS-3UTR CCA 90 bp TTATTTGGTCTTCTAAAATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCACTTAAACTATGCAGCTaGCTACAGCGGTGGGCGATG +
Preference number: 4 (lower is better)
Translates to: LFGLLKSSASSEGQNNLALKLCS*LQRWAM
Trigger: CATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAG...TGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATTTTAGAAGACCAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CCA 90 bp GACTTGTTCAAGGTCTTCATCAGGGTCCTTGAATCCAGTAAAGGAGTAATAAGAATGAGCCACCACGCCTaGCATATAAAACCTCTCCTA +
Preference number: 4 (lower is better)
Translates to: DLFKVFIRVLESSKGVIRMSHHA*HIKPLL
Trigger: TAGGAGAGGTTTTATATGCCAGGCGTGGTGGCTCAT...TCTTATTACTCCTTTACTGGATTCAAGGACCCTGATGAAGACCTTGAACAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp TTAACAGCACTTTTCCCATTGTTATCTAACCAGGATGTGAGAGTTGTTTCCACTTTCTGTTGCTCAGGCTaGAGGGCAATGGTGCAATCT +
Preference number: 4 (lower is better)
Translates to: LTALFPLLSNQDVRVVSTFCCSG*RAMVQS
Trigger: AGATTGCACCATTGCCCTCCAGCCTGAGCAACAGAA...AGTGGAAACAACTCTCACATCCTGGTTAGATAACAATGGGAAAAGTGCTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412611.6
CDS-3UTR CCA 90 bp AGAGTTGTTTCCACTCTCGAGACTTGTTCAAGGTCTTCATCAGGGTCCTTGAATAAGCAAGGCTTTTCCTaGATAGTGTTTGCCCATGAA +
Preference number: 4 (lower is better)
Translates to: RVVSTLETCSRSSSGSLNKQGFS*IVFAHE
Trigger: TTCATGGGCAAACACTATCCAGGAAAAGCCTTGCTT...ATTCAAGGACCCTGATGAAGACCTTGAACAAGTCTCGAGAGTGGAAACAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR TCA 90 bp GTGTTACTTAATGGCTTCTCCATTCTTCCAATTCCAAGGAATACAAAGGTCTCCAGTTTTGTCCAGTGGTaGTGGACATCCATTGTTCCT +
Preference number: 4 (lower is better)
Translates to: VLLNGFSILPIPRNTKVSSFVQW*WTSIVP
Trigger: AGGAACAATGGATGTCCATCACCACTGGACAAAACT...GGAGACCTTTGTATTCCTTGGAATTGGAAGAATGGAGAAGCCATTAAGTAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR TCA 90 bp GCCGGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTTATACAGATGCATGTTaGATTGTAGACATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: AGANDRVSNISNNRKIVVYTDAC*IVDMSS
Trigger: GGAACTCATGTCTACAATTCAACATGCATCTGTATA...AACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCCGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR TCA 90 bp CACTCTCGAGACTTGTTCAAGGTCTTCATCAGGGTCCTTGAATCCAGTAAAGGATATACAGATGCATGTTaGATTGTAGACATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: HSRDLFKVFIRVLESSKGYTDAC*IVDMSS
Trigger: GGAACTCATGTCTACAATTCAACATGCATCTGTATA...TCCTTTACTGGATTCAAGGACCCTGATGAAGACCTTGAACAAGTCTCGAGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR GCA 90 bp ATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAAGGCTCCCTTTCTACGGGGTaGTGTCCAAAGAAATCTGGA +
Preference number: 4 (lower is better)
Translates to: ILHLILFLRALWETGKQGSLSTG*CPKKSG
Trigger: TCCAGATTTCTTTGGACAGCACCCCGTAGAAAGGGA...GCCTTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR GCA 90 bp TTTGGTCTTCTAAAATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCAATCTCCCTTTCTACGGGGTaGTGTCCAAAGAAATCTGGA +
Preference number: 4 (lower is better)
Translates to: FGLLKSSASSEGQNNLAISLSTG*CPKKSG
Trigger: TCCAGATTTCTTTGGACAGCACCCCGTAGAAAGGGA...GATTGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATTTTAGAAGACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR GCA 90 bp TTAACAGCACTTTTCCCATTGTTATCTAACCAGGATGTGAGAGTTGTTTCCACTTCCCTTTCTACGGGGTaGTGTCCAAAGAAATCTGGA +
Preference number: 4 (lower is better)
Translates to: LTALFPLLSNQDVRVVSTSLSTG*CPKKSG
Trigger: TCCAGATTTCTTTGGACAGCACCCCGTAGAAAGGGA...AGTGGAAACAACTCTCACATCCTGGTTAGATAACAATGGGAAAAGTGCTGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000417768.1
CDS-3UTR GCA 90 bp AATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCAATCTTTCAAAAAGTTTAAGCGGCTTAAACTATaGAGCTGGCTACAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: NHQPPLKVKITWQSFKKFKRLKL*SWLQRW
Trigger: CCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTT...AAACTTTTTGAAAGATTGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR GCA 90 bp CATATACTATCAAATACTAGTCCCTGGAGAGACTGGGTGAGGAGTTGTCTTCAACTTATGAGACTCTCATaGCTAGGAACAGCACATTCA +
Preference number: 4 (lower is better)
Translates to: HILSNTSPWRDWVRSCLQLMRLS*LGTAHS
Trigger: TGAATGTGCTGTTCCTAGGCATGAGAGTCTCATAAG...TTGAAGACAACTCCTCACCCAGTCTCTCCAGGGACTAGTATTTGATAGTATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444602.2
CDS-3UTR CCA 90 bp AAATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCAATCTTTCAAAAAGTTCCATTAATTGAGTTCTaGCAAGGGTCCGACGCGAGG +
Preference number: 4 (lower is better)
Translates to: KSSASSEGQNNLAIFQKVPLIEF*QGSDAR
Trigger: CCTCGCGTCGGACCCTTGCCAGAACTCAATTAATGG...AACTTTTTGAAAGATTGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CCA 90 bp ATCAATCACCTGTTTTGGACATTAACTGTCAATTACTGGCTGCAAAATATGTCTGTTCCTAGCATCACATaGCCCACTGCACTCATGCCA +
Preference number: 4 (lower is better)
Translates to: INHLFWTLTVNYWLQNMSVPSIT*PTALMP
Trigger: TGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAAC...AGACATATTTTGCAGCCAGTAATTGACAGTTAATGTCCAAAACAGGTGATTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp AATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCAATCTTTCAAAAAGTTTGTTCCTAGCATCACATaGCCCACTGCACTCATGCCA +
Preference number: 4 (lower is better)
Translates to: NHQPPLKVKITWQSFKKFVPSIT*PTALMP
Trigger: TGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAAC...AAACTTTTTGAAAGATTGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CCA 90 bp TTTCATGTTCTCTCTTGCCTGCTGAGCTTTGGTGAGAATAAACCACTGGAGATTGAGTTCATGCAAGCTTaGAGCATATCTGTCACTGTT +
Preference number: 4 (lower is better)
Translates to: FHVLSCLLSFGENKPLEIEFMQA*SISVTV
Trigger: AACAGTGACAGATATGCTCCAAGCTTGCATGAACTC...AATCTCCAGTGGTTTATTCTCACCAAAGCTCAGCAGGCAAGAGAGAACATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412611.6
CDS-3UTR CCA 90 bp GGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTGAGTGGATCACAGAGTGTTaGAATATTAAAATGCCCGAG +
Preference number: 4 (lower is better)
Translates to: GANDRVSNISNNRKIVVEWITEC*NIKMPE
Trigger: CTCGGGCATTTTAATATTCCAACACTCTGTGATCCA...CTCAACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp TCACTTCAGCTACTCAGTCTCAGCTCCCCAAATACCCAAGGTCAAATTAATACAAAGCTCATCCAAGTCTaGATGTCCAGAGTTTTACTG +
Preference number: 4 (lower is better)
Translates to: SLQLLSLSSPNTQGQINTKLIQV*MSRVLL
Trigger: CAGTAAAACTCTGGACATCCAGACTTGGATGAGCTT...TGTATTAATTTGACCTTGGGTATTTGGGGAGCTGAGACTGAGTAGCTGAAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR CCA 90 bp AGACCACGTGCAAGTTTCCAGTTGTCATTTCACAGTGGAGTTTTACAGACAGTGGTTGTCATTTCACAGTaGAGTTTTACAGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: RPRASFQLSFHSGVLQTVVVISQ*SFTDSA
Trigger: AGCACTGTCTGTAAAACTCCACTGTGAAATGACAAC...CACTGTCTGTAAAACTCCACTGTGAAATGACAACTGGAAACTTGCACGTGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR TCA 90 bp AGATGGAGAAACTGCCAAGAAAAGGAATTTGTGACTCCTGATCTCCCATATTCACTTCCTCCTTCCATTTaGAGTCCGGAAGTACTAAAA +
Preference number: 4 (lower is better)
Translates to: RWRNCQEKEFVTPDLPYSLPPSI*SPEVLK
Trigger: TTTTAGTACTTCCGGACTTCAAATGGAAGGAGGAAG...TGAATATGGGAGATCAGGAGTCACAAATTCCTTTTCTTGGCAGTTTCTCCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444602.2
CDS-3UTR GCA 90 bp GGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTGAGAGTAAAAATGTGAAATaGAGAGGTGCATCCCATGTA +
Preference number: 4 (lower is better)
Translates to: GANDRVSNISNNRKIVVESKNVK*RGASHV
Trigger: TACATGGGATGCACCTCTGCATTTCACATTTTTACT...CTCAACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp GGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTGAGAAATGTAAGCTGAGTTaGTTTCAAAGACTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: GANDRVSNISNNRKIVVEKCKLS*FQRLEA
Trigger: GGCTTCAAGTCTTTGAAACCAACTCAGCTTACATTT...CTCAACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp AATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCAATCTTTCAAAAAGTTTGTACTAAAAGGTTCCTaGCCATCGGAGGAACTCTGG +
Preference number: 4 (lower is better)
Translates to: NHQPPLKVKITWQSFKKFVLKGS*PSEELW
Trigger: CCAGAGTTCCTCCGATGGCCAGGAACCTTTTAGTAC...AAACTTTTTGAAAGATTGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CCA 90 bp ATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAAGGCCCACTGGAGATTTGCTaGATCACAGAGTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: ILHLILFLRALWETGKQGPLEIC*ITECWN
Trigger: ATTCCAACACTCTGTGATCCAGCAAATCTCCAGTGG...GCCTTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp GGCCTGTCAGGCATCCTTTTAGCTTCTTTGAGAGGCTGGGTATGCATATTAGTACTTGGGCAAAATTGGTaGTTATCTAATTTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: GLSGILLASLRGWVCILVLGQNW*LSNFCY
Trigger: GTAACAGAAATTAGATAACCACCAATTTTGCCCAAG...TACTAATATGCATACCCAGCCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp TTTGGTCTTCTAAAATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCAATCTTTCTTAGAGCTCTTTaGGAAACAGGCAAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: FGLLKSSASSEGQNNLAIFLRAL*ETGKQG
Trigger: GCCTTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAA...GATTGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATTTTAGAAGACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp CACTCTCGAGACTTGTTCAAGGTCTTCATCAGGGTCCTTGAATCCAGTAAAGGAACAAGAAATCCTGAATaGTCTGAACCATTTTACACT +
Preference number: 4 (lower is better)
Translates to: HSRDLFKVFIRVLESSKGTRNPE*SEPFYT
Trigger: AGTGTAAAATGGTTCAGACCATTCAGGATTTCTTGT...TCCTTTACTGGATTCAAGGACCCTGATGAAGACCTTGAACAAGTCTCGAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp ATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAAGGCGCAAGAGCCCAAAAATaGTGTTCCAAGCCAAGATTC +
Preference number: 4 (lower is better)
Translates to: ILHLILFLRALWETGKQGARAQK*CSKPRF
Trigger: GAATCTTGGCTTGGAACACCATTTTTGGGCTCTTGC...GCCTTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR CCA 90 bp CGTGCAAGTTTCCAGTTGTCATTTCACAGTGGAGTTTTACAGACAGTGCTTAATATAAACTATCTGGCATaGTCAAAGGCCTCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: RASFQLSFHSGVLQTVLNINYLA*SKASGK
Trigger: TTTGCCTGAGGCCTTTGACCATGCCAGATAGTTTAT...ATTAAGCACTGTCTGTAAAACTCCACTGTGAAATGACAACTGGAAACTTGCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR TCA 90 bp TTTGGTCTTCTAAAATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCAATCAACAGAGTAAAAATGTaGAATGCAGAGGTGCATCCC +
Preference number: 4 (lower is better)
Translates to: FGLLKSSASSEGQNNLAINRVKM*NAEVHP
Trigger: GGGATGCACCTCTGCATTTCACATTTTTACTCTGTT...GATTGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATTTTAGAAGACCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR TCA 90 bp TTTCATGTTCTCTCTTGCCTGCTGAGCTTTGGTGAGAATAAACCACTGGAGATTTATACAGATGCATGTTaGATTGTAGACATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: FHVLSCLLSFGENKPLEIYTDAC*IVDMSS
Trigger: GGAACTCATGTCTACAATTCAACATGCATCTGTATA...AATCTCCAGTGGTTTATTCTCACCAAAGCTCAGCAGGCAAGAGAGAACATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR TCA 90 bp TCACTTCAGCTACTCAGTCTCAGCTCCCCAAATACCCAAGGTCAAATTAATACAAAATCACTAGGGCATTaGAAACTCTTCCATGTATCA +
Preference number: 4 (lower is better)
Translates to: SLQLLSLSSPNTQGQINTKSLGH*KLFHVS
Trigger: TGATACATGGAAGAGTTTTCAATGCCCTAGTGATTT...TGTATTAATTTGACCTTGGGTATTTGGGGAGCTGAGACTGAGTAGCTGAAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR TCA 90 bp ATCAATCACCTGTTTTGGACATTAACTGTCAATTACTGGCTGCAAAATATGTCTTGCACAGTGAGGTTGTaGGAGCTAAAGACAGAATGC +
Preference number: 4 (lower is better)
Translates to: INHLFWTLTVNYWLQNMSCTVRL*ELKTEC
Trigger: GCATTCTGTCTTTAGCTCTCACAACCTCACTGTGCA...AGACATATTTTGCAGCCAGTAATTGACAGTTAATGTCCAAAACAGGTGATTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431657.5
CDS-3UTR GCA 90 bp ATTCATTCAGTAGCAAGAGCCCAAAAATGGTGTTCCAAGCCAAGATTCACCTTGGTTGGAATATTAAAATaGCCGAGTTCATGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: IHSVARAQKWCSKPRFTLVGILK*PSSCKL
Trigger: AAGCTTGCATGAACTCGGGCATTTTAATATTCCAAC...CAAGGTGAATCTTGGCTTGGAACACCATTTTTGGGCTCTTGCTACTGAATGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR GCA 90 bp AAGGTCTTCATCAGGGTCCTTGAATCCAGTAAAGGAGTAATAAGACTTGTCCCAGTTGGAATATTAAAATaGCCGAGTTCATGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: KVFIRVLESSKGVIRLVPVGILK*PSSCKL
Trigger: AAGCTTGCATGAACTCGGGCATTTTAATATTCCAAC...TGGGACAAGTCTTATTACTCCTTTACTGGATTCAAGGACCCTGATGAAGACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp AAGGTCTTCATCAGGGTCCTTGAATCCAGTAAAGGAGTAATAAGACTTGTCCCACTCATAGGTCTCAGGTaGCAAAACATTTCTGAATAT +
Preference number: 4 (lower is better)
Translates to: KVFIRVLESSKGVIRLVPLIGLR*QNISEY
Trigger: ATATTCAGAAATGTTTTGCCACCTGAGACCTATGAG...TGGGACAAGTCTTATTACTCCTTTACTGGATTCAAGGACCCTGATGAAGACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CCA 90 bp GTGTTACTTAATGGCTTCTCCATTCTTCCAATTCCAAGGAATACAAAGGTCTCCGCTTCTTTGAGAGGCTaGGTATGCATATTAGTATTC +
Preference number: 4 (lower is better)
Translates to: VLLNGFSILPIPRNTKVSASLRG*VCILVF
Trigger: GAATACTAATATGCATACCCAGCCTCTCAAAGAAGC...GGAGACCTTTGTATTCCTTGGAATTGGAAGAATGGAGAAGCCATTAAGTAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp ATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAAGGCGTGAGAATAAACCACTaGAGATTTGCTGGATCACAG +
Preference number: 4 (lower is better)
Translates to: ILHLILFLRALWETGKQGVRINH*RFAGSQ
Trigger: CTGTGATCCAGCAAATCTCCAGTGGTTTATTCTCAC...GCCTTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp CGTGCAAGTTTCCAGTTGTCATTTCACAGTGGAGTTTTACAGACAGTGCTTAATGTTGTCATTTCACAGTaGAGTTTTACAGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: RASFQLSFHSGVLQTVLNVVISQ*SFTDSA
Trigger: AGCACTGTCTGTAAAACTCCACTGTGAAATGACAAC...ATTAAGCACTGTCTGTAAAACTCCACTGTGAAATGACAACTGGAAACTTGCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR TCA 90 bp AATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCAATCTTTCAAAAAGTTTTTCTCTCTTGCCTGCTaGGCTTTGGTGAGAATAAAC +
Preference number: 4 (lower is better)
Translates to: NHQPPLKVKITWQSFKKFFSLAC*ALVRIN
Trigger: GTTTATTCTCACCAAAGCTCAGCAGGCAAGAGAGAA...AAACTTTTTGAAAGATTGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR GCA 90 bp ATCAATCACCTGTTTTGGACATTAACTGTCAATTACTGGCTGCAAAATATGTCTTTTCATGTTCTCTCTTaGCTGCTGAGCTTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: INHLFWTLTVNYWLQNMSFHVLS*LLSFGE
Trigger: CTCACCAAAGCTCAGCAGGCAAGAGAGAACATGAAA...AGACATATTTTGCAGCCAGTAATTGACAGTTAATGTCCAAAACAGGTGATTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp ATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAAGGCGCTTCTTTGAGAGGCTaGGTATGCATATTAGTATTC +
Preference number: 4 (lower is better)
Translates to: ILHLILFLRALWETGKQGASLRG*VCILVF
Trigger: GAATACTAATATGCATACCCAGCCTCTCAAAGAAGC...GCCTTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp ACCATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAAGAGTTCATGCAAGCTTaGAGCATATCTGTCACTGTT +
Preference number: 4 (lower is better)
Translates to: TILHLILFLRALWETGKQEFMQA*SISVTV
Trigger: AACAGTGACAGATATGCTCCAAGCTTGCATGAACTC...TTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR CCA 90 bp CATTTTTCATATCAGTTTGTATTCCTGGAGCACACATTAACTGATGTTGTAGGGATAAACTATCTGGCATaGTCAAAGGCCTCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: HFSYQFVFLEHTLTDVVGINYLA*SKASGK
Trigger: TTTGCCTGAGGCCTTTGACCATGCCAGATAGTTTAT...CCCTACAACATCAGTTAATGTGTGCTCCAGGAATACAAACTGATATGAAAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR GCA 90 bp ATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAAGGCAGTAAAAATGTGAAATaGAGAGGTGCATCCCATGTA +
Preference number: 4 (lower is better)
Translates to: ILHLILFLRALWETGKQGSKNVK*RGASHV
Trigger: TACATGGGATGCACCTCTGCATTTCACATTTTTACT...GCCTTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR TCA 90 bp TTTCTGTGTTACTTAATGGCTTCTCCATTCTTCCAATTCCAAGGAATACAAAGGTTATCAGACTGCTTATaGCAATGTCAGTACCATACA +
Preference number: 4 (lower is better)
Translates to: FLCYLMASPFFQFQGIQRLSDCL*QCQYHT
Trigger: TGTATGGTACTGACATTGTCATAAGCAGTCTGATAA...CCTTTGTATTCCTTGGAATTGGAAGAATGGAGAAGCCATTAAGTAACACAGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR GCA 90 bp ATCAATCACCTGTTTTGGACATTAACTGTCAATTACTGGCTGCAAAATATGTCTAGCAGATCTCTGGTGTaGAAAGTAAATTTGACTGCT +
Preference number: 4 (lower is better)
Translates to: INHLFWTLTVNYWLQNMSSRSLV*KVNLTA
Trigger: AGCAGTCAAATTTACTTTGCACACCAGAGATCTGCT...AGACATATTTTGCAGCCAGTAATTGACAGTTAATGTCCAAAACAGGTGATTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342649.9
CDS-3UTR GCA 90 bp ACCATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAAGAATATATAACACTGTaGTTAGCAGATCTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: TILHLILFLRALWETGKQEYITL*LADLWC
Trigger: ACACCAGAGATCTGCTAAGCACAGTGTTATATATTC...TTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342649.9
CDS-3UTR CCA 90 bp ACCATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAACTCATAGGTCTCAGGTaGCAAAACATTTCTGAATAT +
Preference number: 4 (lower is better)
Translates to: TILHLILFLRALWETGKQLIGLR*QNISEY
Trigger: ATATTCAGAAATGTTTTGCCACCTGAGACCTATGAG...TTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp AATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCAATCTTTCAAAAAGTTTGCTTCTTTGAGAGGCTaGGTATGCATATTAGTATTC +
Preference number: 4 (lower is better)
Translates to: NHQPPLKVKITWQSFKKFASLRG*VCILVF
Trigger: GAATACTAATATGCATACCCAGCCTCTCAAAGAAGC...AAACTTTTTGAAAGATTGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR TCA 90 bp ATCAATCACCTGTTTTGGACATTAACTGTCAATTACTGGCTGCAAAATATGTCTTTATCAGACTGCTTATaGCAATGTCAGTACCATACA +
Preference number: 4 (lower is better)
Translates to: INHLFWTLTVNYWLQNMSLSDCL*QCQYHT
Trigger: TGTATGGTACTGACATTGTCATAAGCAGTCTGATAA...AGACATATTTTGCAGCCAGTAATTGACAGTTAATGTCCAAAACAGGTGATTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR GCA 90 bp AATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCAATCTTTCAAAAAGTTTAGTAAAAATGTGAAATaGAGAGGTGCATCCCATGTA +
Preference number: 4 (lower is better)
Translates to: NHQPPLKVKITWQSFKKFSKNVK*RGASHV
Trigger: TACATGGGATGCACCTCTGCATTTCACATTTTTACT...AAACTTTTTGAAAGATTGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CCA 90 bp TATTTAATTCCTAGCCTAATCTTGACCCTGACTAACAGGAGCATACATCTATTACTCATAGGTCTCAGGTaGCAAAACATTTCTGAATAT +
Preference number: 4 (lower is better)
Translates to: YLIPSLILTLTNRSIHLLLIGLR*QNISEY
Trigger: ATATTCAGAAATGTTTTGCCACCTGAGACCTATGAG...TAATAGATGTATGCTCCTGTTAGTCAGGGTCAAGATTAGGCTAGGAATTAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444602.2
3UTR CAA 72 bp AAACTGTTCTTTAGCTTTTTAACAGCACTTTTCCCATaGTTATCTAACCAGGATGTGAGAGTTGTTTCCACT +
Preference number: 4 (lower is better)
Translates to: KLFFSFLTALFP*LSNQDVRVVST
Trigger: AGTGGAAACAACTCTCACATCCTGGTTAGATAACAATGGGAAAAGTGCTGTTAAAAAGCTAAAGAACAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000417768.1
3UTR CAA 72 bp AATATTTGGTTTTACACTAGTAACAATCTATCTCAGTaGCTTATGAGACTCTCATGCCTAGGAACAGCACAT +
Preference number: 4 (lower is better)
Translates to: NIWFYTSNNLSQ*LMRLSCLGTAH
Trigger: ATGTGCTGTTCCTAGGCATGAGAGTCTCATAAGCAACTGAGATAGATTGTTACTAGTGTAAAACCAAATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444602.2
CDS-3UTR CCA 90 bp ATCAATCACCTGTTTTGGACATTAACTGTCAATTACTGGCTGCAAAATATGTCTCTTGGGCAAAATTGGTaGTTATCTAATTTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: INHLFWTLTVNYWLQNMSLGQNW*LSNFCY
Trigger: GTAACAGAAATTAGATAACCACCAATTTTGCCCAAG...AGACATATTTTGCAGCCAGTAATTGACAGTTAATGTCCAAAACAGGTGATTGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS CCA 90 bp CGCCCGCAGGGCTGTTCGGACGCGCATGCGCACTGGGGCGTCAGCTaGCCAACCAGCGCGCGACGCACGGCCAGGCGCTCCCACCTGCCC +
Preference number: 5 (lower is better)
Translates to: RPQGCSDAHAHWGVS*PTSARRTARRSHLP
Trigger: GGGCAGGTGGGAGCGCCTGGCCGTGCGTCGCGCGCTGGTTGGCCAGCTGACGCCCCAGTGCGCATGCGCGTCCGAACAGCCCTGCGGGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396078.7
CDS CCA 90 bp GGACAGTCGCTCCGCCCGCAGGGCTGTTCGGACGCGCATGCGCACTaGGGCGTCAGCTGGCCAACCAGCGCGCGACGCACGGCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: GQSLRPQGCSDAHAH*GVSWPTSARRTARR
Trigger: GCGCCTGGCCGTGCGTCGCGCGCTGGTTGGCCAGCTGACGCCCCAGTGCGCATGCGCGTCCGAACAGCCCTGCGGGCGGAGCGACTGTCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396078.7
CDS CCA 90 bp AGCGCGCGACGCACGGCCAGGCGCTCCCACCTGCCCTCGCCCCGGTaGGCGACAGGCTTTGACGGGCTCCTAGCCGCAGTGCCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: SARRTARRSHLPSPR*ATGFDGLLAAVPSE
Trigger: CTCAGAGGGCACTGCGGCTAGGAGCCCGTCAAAGCCTGTCGCCCACCGGGGCGAGGGCAGGTGGGAGCGCCTGGCCGTGCGTCGCGCGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396078.7
CDS GCA 90 bp GAAGGGAGGACAGTCGCTCCGCCCGCAGGGCTGTTCGGACGCGCATaGGCACTGGGGCGTCAGCTGGCCAACCAGCGCGCGACGCACGGC +
Preference number: 5 (lower is better)
Translates to: EGRTVAPPAGLFGRA*ALGRQLANQRATHG
Trigger: GCCGTGCGTCGCGCGCTGGTTGGCCAGCTGACGCCCCAGTGCGCATGCGCGTCCGAACAGCCCTGCGGGCGGAGCGACTGTCCTCCCTTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396078.7
CDS TCA 90 bp GAGGCGCGAGCGAGCACTCCGACTAGGCCGGAGGGACTCGGAAAATaGTGGTCCGGCAGGTGGTGGGTCCTGACCCAAGGGCCTGCAAGG +
Preference number: 5 (lower is better)
Translates to: EARASTPTRPEGLGK*WSGRWWVLTQGPAR
Trigger: CCTTGCAGGCCCTTGGGTCAGGACCCACCACCTGCCGGACCATCATTTTCCGAGTCCCTCCGGCCTAGTCGGAGTGCTCGCTCGCGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383746.7
ENST00000417237.5
ENST00000494638.5
CDS TCA 90 bp GGCCGGAGGGACTCGGAAAATGATGGTCCGGCAGGTGGTGGGTCCTaGCCCAAGGGCCTGCAAGGAACGGAGAAGGGCAACCGAGCACGC +
Preference number: 5 (lower is better)
Translates to: GRRDSENDGPAGGGS*PKGLQGTEKGNRAR
Trigger: GCGTGCTCGGTTGCCCTTCTCCGTTCCTTGCAGGCCCTTGGGTCAGGACCCACCACCTGCCGGACCATCATTTTCCGAGTCCCTCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383746.7
ENST00000417237.5
ENST00000494638.5
CDS GCA 90 bp CGGAAAATGATGGTCCGGCAGGTGGTGGGTCCTGACCCAAGGGCCTaGAAGGAACGGAGAAGGGCAACCGAGCACGCGCTGGATCTTGGG +
Preference number: 5 (lower is better)
Translates to: RKMMVRQVVGPDPRA*KERRRATEHALDLG
Trigger: CCCAAGATCCAGCGCGTGCTCGGTTGCCCTTCTCCGTTCCTTGCAGGCCCTTGGGTCAGGACCCACCACCTGCCGGACCATCATTTTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383746.7
ENST00000417237.5
ENST00000494638.5
CDS GCA 90 bp GAATGGGGCGGGGAGAGCTCAGGAAGGTCTTCTCTAAGGAAATGGTaGCTTTCAGTTCTGGCAAGGGTCCGACGCGAGGGCTTTGTCCGA +
Preference number: 5 (lower is better)
Translates to: EWGGESSGRSSLRKW*LSVLARVRREGFVR
Trigger: TCGGACAAAGCCCTCGCGTCGGACCCTTGCCAGAACTGAAAGGCACCATTTCCTTAGAGAAGACCTTCCTGAGCTCTCCCCGCCCCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462612.1
CDS-3UTR CAA 90 bp GGCTTAAACTATGCAGCTGGCTACAGCGGTGGGCGATGCCCCAGCTCCTCTGCCCGAGTTCATGCAAGCTaGGAGCATATCTGTCACTGC +
Preference number: 5 (lower is better)
Translates to: GLNYAAGYSGGRCPSSSARVHAS*EHICHC
Trigger: GCAGTGACAGATATGCTCCAAGCTTGCATGAACTCG...GGCAGAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431657.5
CDS CCA 90 bp TTGGAATGGGGCGGGGAGAGCTCAGGAAGGTCTTCTCTAAGGAAATaGTGCCTTTCAGTTCTGGCAAGGGTCCGACGCGAGGGCTTTGTC +
Preference number: 5 (lower is better)
Translates to: LEWGGESSGRSSLRK*CLSVLARVRREGFV
Trigger: GACAAAGCCCTCGCGTCGGACCCTTGCCAGAACTGAAAGGCACCATTTCCTTAGAGAAGACCTTCCTGAGCTCTCCCCGCCCCATTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462612.1
CDS-3UTR CAA 90 bp TTAAACTATGCAGCTGGCTACAGCGGTGGGCGATGCCCCAGCTCCTCTGCCACCCTCCCGATAAAGCTCTaGAAAAGGGAAACCAGTGTG +
Preference number: 5 (lower is better)
Translates to: LNYAAGYSGGRCPSSSATLPIKL*KRETSV
Trigger: CACACTGGTTTCCCTTTTCAAGAGCTTTATCGGGAG...GGTGGCAGAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CAA 90 bp TTAAACTATGCAGCTGGCTACAGCGGTGGGCGATGCCCCAGCTCCTCTGCCACCGTGTGTAGAAGAGGGTaGCTAACACAAGTAGTGGCA +
Preference number: 5 (lower is better)
Translates to: LNYAAGYSGGRCPSSSATVCRRG*LTQVVA
Trigger: TGCCACTACTTGTGTTAGCAACCCTCTTCTACACAC...GGTGGCAGAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431657.5
CDS-3UTR CAA 90 bp GCTCAGAGCTCATTTCCCAGTAGCCAGTCAAAGGTCAGCACTGGGGTCAGACCTAAAGGCCTCAAGGCATaGACTGCTTCAGCTCCCGAT +
Preference number: 5 (lower is better)
Translates to: AQSSFPSSQSKVSTGVRPKGLKA*TASAPD
Trigger: ATCGGGAGCTGAAGCAGTCAATGCCTTGAGGCCTTT...AGGTCTGACCCCAGTGCTGACCTTTGACTGGCTACTGGGAAATGAGCTCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR CAA 90 bp GGCTTAAACTATGCAGCTGGCTACAGCGGTGGGCGATGCCCCAGCTCCTCTGCCATCCTTTTAGCTTCTTaGAGAGGCTGGGTATGCATA +
Preference number: 5 (lower is better)
Translates to: GLNYAAGYSGGRCPSSSAILLAS*RGWVCI
Trigger: TATGCATACCCAGCCTCTCAAAGAAGCTAAAAGGAT...GGCAGAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CAA 90 bp AGCGGCTTAAACTATGCAGCTGGCTACAGCGGTGGGCGATGCCCCAGCTCCTCTATCCTTTTAGCTTCTTaGAGAGGCTGGGTATGCATA +
Preference number: 5 (lower is better)
Translates to: SGLNYAAGYSGGRCPSSSILLAS*RGWVCI
Trigger: TATGCATACCCAGCCTCTCAAAGAAGCTAAAAGGAT...AGAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CAA 90 bp TCTGCTGTGCTAAGCGGCTTAAACTATGCAGCTGGCTACAGCGGTGGGCGATGCTTCCACTCTCGAGACTaGTTCAAGGTCTTCATCAGG +
Preference number: 5 (lower is better)
Translates to: SAVLSGLNYAAGYSGGRCFHSRD*FKVFIR
Trigger: CCTGATGAAGACCTTGAACAAGTCTCGAGAGTGGAA...GCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTTAGCACAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CAA 90 bp CCTCAGGCAAACAGAAACATTCCTATCCAGGGGCTCAGAGCTCATTTCCCAGTAGGTATCCATAGGGGATaGGTTCCAGGACCTCCCGTG +
Preference number: 5 (lower is better)
Translates to: PQANRNIPIQGLRAHFPVGIHRG*VPGPPV
Trigger: CACGGGAGGTCCTGGAACCAATCCCCTATGGATACC...TACTGGGAAATGAGCTCTGAGCCCCTGGATAGGAATGTTTCTGTTTGCCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR CAA 90 bp GCTCAGAGCTCATTTCCCAGTAGCCAGTCAAAGGTCAGCACTGGGGTCAGACCTCTATGTTGCCCAGGCTaGAATTCCTGGGCTCAAGTA +
Preference number: 5 (lower is better)
Translates to: AQSSFPSSQSKVSTGVRPLCCPG*NSWAQV
Trigger: TACTTGAGCCCAGGAATTCAAGCCTGGGCAACATAG...AGGTCTGACCCCAGTGCTGACCTTTGACTGGCTACTGGGAAATGAGCTCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR CAA 90 bp GTAGCCAGTCAAAGGTCAGCACTGGGGTCAGACCTTTCTTTGGAATGTGCAAGGAAAGGCCTCAAGGCATaGACTGCTTCAGCTCCCGAT +
Preference number: 5 (lower is better)
Translates to: VASQRSALGSDLSLECARKGLKA*TASAPD
Trigger: ATCGGGAGCTGAAGCAGTCAATGCCTTGAGGCCTTT...CCTTGCACATTCCAAAGAAAGGTCTGACCCCAGTGCTGACCTTTGACTGGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR CAA 90 bp CTGAATCCAGAGATCAGGTCTCTCGGCTGTGCTGGGGACACCATCAACCACTTGTTCCACTCTCGAGACTaGTTCAAGGTCTTCATCAGG +
Preference number: 5 (lower is better)
Translates to: LNPEIRSLGCAGDTINHLFHSRD*FKVFIR
Trigger: CCTGATGAAGACCTTGAACAAGTCTCGAGAGTGGAA...CAAGTGGTTGATGGTGTCCCCAGCACAGCCGAGAGACCTGATCTCTGGATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR CAA 90 bp TTAAACTATGCAGCTGGCTACAGCGGTGGGCGATGCCCCAGCTCCTCTGCCACCCTATACAGATGCATGTaGAATTGTAGACATGAGTTC +
Preference number: 5 (lower is better)
Translates to: LNYAAGYSGGRCPSSSATLYRCM*NCRHEF
Trigger: GAACTCATGTCTACAATTCAACATGCATCTGTATAG...GGTGGCAGAGGAGCTGGGGCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CAA 90 bp GGGATTGGTTCCAGGACCTCCCGTGGATACCGAAATCTGCGAATGCTCAAGTCTATACATAGCAGTCCCTaGGTATCCATAGGGGATTGG +
Preference number: 5 (lower is better)
Translates to: GIGSRTSRGYRNLRMLKSIHSSP*VSIGDW
Trigger: CCAATCCCCTATGGATACCAAGGGACTGCTATGTAT...AGACTTGAGCATTCGCAGATTTCGGTATCCACGGGAGGTCCTGGAACCAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR CAA 90 bp CATTTTTCATATCAGTTTGTATTCCTGGAGCACACATTAACTGATGTTGTAGGGCAGGTGACGCCCTGGTaGGCTGGAGCGTGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: HFSYQFVFLEHTLTDVVGQVTPW*AGACQA
Trigger: GGCCTGGCACGCTCCAGCCAACCAGGGCGTCACCTG...CCCTACAACATCAGTTAATGTGTGCTCCAGGAATACAAACTGATATGAAAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396078.7
CDS-3UTR CAA 90 bp TCTGCTGTGCTAAGCGGCTTAAACTATGCAGCTGGCTACAGCGGTGGGCGATGCACAGCACTTTTCCCATaGTTATCTAACCAGGATCTG +
Preference number: 5 (lower is better)
Translates to: SAVLSGLNYAAGYSGGRCTALFP*LSNQDL
Trigger: CAGATCCTGGTTAGATAACAATGGGAAAAGTGCTGT...GCATCGCCCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTTAGCACAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431657.5
CDS CCA 90 bp AGGTTGGCAGGCATGGCTGCCTGCCGCTTCACAACGCCCAGATCTTaGGTTAGTCTTCAACCTTGTAAGAACAGAACCCAATTTTATCAC +
Preference number: 5 (lower is better)
Translates to: RLAGMAACRFTTPRS*VSLQPCKNRTQFYH
Trigger: GTGATAAAATTGGGTTCTGTTCTTACAAGGTTGAAGACTAACCCAAGATCTGGGCGTTGTGAAGCGGCAGGCAGCCATGCCTGCCAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462612.1
CDS-3UTR CAA 90 bp GGCTGTGCTGGGGACACCATCAACCACTTGGGGTTGAATTCTATTGCTATGAATAAAGGCCTCAAGGCATaGACTGCTTCAGCTCCCGAT +
Preference number: 5 (lower is better)
Translates to: GCAGDTINHLGLNSIAMNKGLKA*TASAPD
Trigger: ATCGGGAGCTGAAGCAGTCAATGCCTTGAGGCCTTT...ATTCATAGCAATAGAATTCAACCCCAAGTGGTTGATGGTGTCCCCAGCACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CAA 90 bp GTTCCTAGCATCACATGGCCCACTGCACTCATGCCAGAACGGTCTGTAAATATGGGTGATGGACATCCATaGTTCCTAGCATCACATGGC +
Preference number: 5 (lower is better)
Translates to: VPSITWPTALMPERSVNMGDGHP*FLASHG
Trigger: GCCATGTGATGCTAGGAACAATGGATGTCCATCACC...CATATTTACAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CAA 90 bp TCCCATTTGATGGGCCTGTCAGGCATCCTTTTAGCTTCTTTGAGAGGCTGGGTAGGTGATGGACATCCATaGTTCCTAGCATCACATGGC +
Preference number: 5 (lower is better)
Translates to: SHLMGLSGILLASLRGWVGDGHP*FLASHG
Trigger: GCCATGTGATGCTAGGAACAATGGATGTCCATCACC...TACCCAGCCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCCCATCAAATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CAA 90 bp CAAAGGCCTCAGGCAAACAGAAACATTCCTATCCAGGGGCTCAGAGCTCATTTCCTATGTTGCCCAGGCTaGAATTCCTGGGCTCAAGTA +
Preference number: 5 (lower is better)
Translates to: QRPQANRNIPIQGLRAHFLCCPG*NSWAQV
Trigger: TACTTGAGCCCAGGAATTCAAGCCTGGGCAACATAG...GAAATGAGCTCTGAGCCCCTGGATAGGAATGTTTCTGTTTGCCTGAGGCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR CAA 90 bp CAAAGGCCTCAGGCAAACAGAAACATTCCTATCCAGGGGCTCAGAGCTCATTTCCTCCCGATAAAGCTCTaGAAAAGGGAAACCAGTGTG +
Preference number: 5 (lower is better)
Translates to: QRPQANRNIPIQGLRAHFLPIKL*KRETSV
Trigger: CACACTGGTTTCCCTTTTCAAGAGCTTTATCGGGAG...GAAATGAGCTCTGAGCCCCTGGATAGGAATGTTTCTGTTTGCCTGAGGCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR CAA 90 bp TATCTGGCATGGTCAAAGGCCTCAGGCAAACAGAAACATTCCTATCCAGGGGCTCTCCCGATAAAGCTCTaGAAAAGGGAAACCAGTGTG +
Preference number: 5 (lower is better)
Translates to: YLAWSKASGKQKHSYPGALPIKL*KRETSV
Trigger: CACACTGGTTTCCCTTTTCAAGAGCTTTATCGGGAG...AGCCCCTGGATAGGAATGTTTCTGTTTGCCTGAGGCCTTTGACCATGCCAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR CAA 90 bp CTGAATCCAGAGATCAGGTCTCTCGGCTGTGCTGGGGACACCATCAACCACTTGCTTCTAGTCTTTCTCTaGGGCAAAATTGGTGGTTAT +
Preference number: 5 (lower is better)
Translates to: LNPEIRSLGCAGDTINHLLLVFL*GKIGGY
Trigger: ATAACCACCAATTTTGCCCAAGAGAAAGACTAGAAG...CAAGTGGTTGATGGTGTCCCCAGCACAGCCGAGAGACCTGATCTCTGGATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR CAA 90 bp ACTCTGAGGGGCTTTAACCAGGCCGGGGCTAATGACAGGGTTTCAAACATCAGTAAGCCAAGATTCACCTaGTCCTCTTCAGAAATGACC +
Preference number: 5 (lower is better)
Translates to: TLRGFNQAGANDRVSNISKPRFT*SSSEMT
Trigger: GGTCATTTCTGAAGAGGACAAGGTGAATCTTGGCTT...ACTGATGTTTGAAACCCTGTCATTAGCCCCGGCCTGGTTAAAGCCCCTCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR CAA 90 bp AGCATAAACTATCTGGCATGGTCAAAGGCCTCAGGCAAACAGAAACATTCCTATGGTATCCATAGGGGATaGGTTCCAGGACCTCCCGTG +
Preference number: 5 (lower is better)
Translates to: SINYLAWSKASGKQKHSYGIHRG*VPGPPV
Trigger: CACGGGAGGTCCTGGAACCAATCCCCTATGGATACC...ATAGGAATGTTTCTGTTTGCCTGAGGCCTTTGACCATGCCAGATAGTTTATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR CAA 90 bp TCCAAATTCTGCTGTGCTAAGCGGCTTAAACTATGCAGCTGGCTACAGCGGTGGACAGCACTTTTCCCATaGTTATCTAACCAGGATGTG +
Preference number: 5 (lower is better)
Translates to: SKFCCAKRLKLCSWLQRWTALFP*LSNQDV
Trigger: CACATCCTGGTTAGATAACAATGGGAAAAGTGCTGT...CCACCGCTGTAGCCAGCTGCATAGTTTAAGCCGCTTAGCACAGCAGAATTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000417768.1
CDS-3UTR CAA 90 bp ACTCTGAGGGGCTTTAACCAGGCCGGGGCTAATGACAGGGTTTCAAACATCAGTACAGGAAGATCGTGGTaGAGAAGAGTGACAAGAAAT +
Preference number: 5 (lower is better)
Translates to: TLRGFNQAGANDRVSNISTGRSW*RRVTRN
Trigger: ATTTCTTGTCACTCTTCTCAACCACGATCTTCCTGT...ACTGATGTTTGAAACCCTGTCATTAGCCCCGGCCTGGTTAAAGCCCCTCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CAA 90 bp GAGCAGAATCAGGAGAGACCACGTGCAAGTTTCCAGTTGTCATTTCACAGTGGAATACATAGCAGTCCCTaGGTATCCATAGGGGATTGG +
Preference number: 5 (lower is better)
Translates to: EQNQERPRASFQLSFHSGIHSSP*VSIGDW
Trigger: CCAATCCCCTATGGATACCAAGGGACTGCTATGTAT...TCCACTGTGAAATGACAACTGGAAACTTGCACGTGGTCTCTCCTGATTCTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS-3UTR CAA 90 bp TCCCTGGAGAGACTGGGTGAGGAGTTGTCTTCAACATACTTCAGCATTCTTCAGATTCCTAGCCTAATCTaGACCCTGACTAACAGGAGC +
Preference number: 5 (lower is better)
Translates to: SLERLGEELSSTYFSILQIPSLI*TLTNRS
Trigger: GCTCCTGTTAGTCAGGGTCAAGATTAGGCTAGGAAT...CTGAAGAATGCTGAAGTATGTTGAAGACAACTCCTCACCCAGTCTCTCCAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444602.2
CDS-3UTR CAA 90 bp GCCGGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTCTCCCGATAAAGCTCTaGAAAAGGGAAACCAGTGTG +
Preference number: 5 (lower is better)
Translates to: AGANDRVSNISNNRKIVVLPIKL*KRETSV
Trigger: CACACTGGTTTCCCTTTTCAAGAGCTTTATCGGGAG...AACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCCGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS GCA 90 bp TACTATCAGCTGACTGAAGACACATTGCTTCAGAGTAGAGTTGGGTaGTCTCATTCAGACACTAGCTCCAAAAGTCTGGGACATCCACAT +
Preference number: 5 (lower is better)
Translates to: YYQLTEDTLLQSRVG*SHSDTSSKSLGHPH
Trigger: ATGTGGATGTCCCAGACTTTTGGAGCTAGTGTCTGAATGAGAGCACCCAACTCTACTCTGAAGCAATGTGTCTTCAGTCAGCTGATAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462612.1
CDS-3UTR CAA 90 bp AGATGGAGAAACTGCCAAGAAAAGGAATTTGTGACTCCTGATCTCCCATATTCAAAAGGCCTCAAGGCATaGACTGCTTCAGCTCCCGAT +
Preference number: 5 (lower is better)
Translates to: RWRNCQEKEFVTPDLPYSKGLKA*TASAPD
Trigger: ATCGGGAGCTGAAGCAGTCAATGCCTTGAGGCCTTT...TGAATATGGGAGATCAGGAGTCACAAATTCCTTTTCTTGGCAGTTTCTCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444602.2
CDS-3UTR CAA 90 bp TCCATTGTTCCTAGCATCACATGGCCCACTGCACTCATGCCAGAACGGTCTGTATTAAGAGAATTTTCATaGATTTCCCTTTCTACGGGG +
Preference number: 5 (lower is better)
Translates to: SIVPSITWPTALMPERSVLREFS*ISLSTG
Trigger: CCCCGTAGAAAGGGAAATCAATGAAAATTCTCTTAA...TACAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAACAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CAA 90 bp ACTCTGAGGGGCTTTAACCAGGCCGGGGCTAATGACAGGGTTTCAAACATCAGTCTATACAGATGCATGTaGAATTGTAGACATGAGTTC +
Preference number: 5 (lower is better)
Translates to: TLRGFNQAGANDRVSNISLYRCM*NCRHEF
Trigger: GAACTCATGTCTACAATTCAACATGCATCTGTATAG...ACTGATGTTTGAAACCCTGTCATTAGCCCCGGCCTGGTTAAAGCCCCTCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CAA 90 bp CACTCTCGAGACTTGTTCAAGGTCTTCATCAGGGTCCTTGAATCCAGTAAAGGAAAGCCAAGATTCACCTaGTCCTCTTCAGAAATGACC +
Preference number: 5 (lower is better)
Translates to: HSRDLFKVFIRVLESSKGKPRFT*SSSEMT
Trigger: GGTCATTTCTGAAGAGGACAAGGTGAATCTTGGCTT...TCCTTTACTGGATTCAAGGACCCTGATGAAGACCTTGAACAAGTCTCGAGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412611.6
CDS-3UTR CAA 90 bp TTAACAGCACTTTTCCCATTGTTATCTAACCAGGATGTGAGAGTTGTTTCCACTAAAGGCCTCAAGGCATaGACTGCTTCAGCTCCCGAT +
Preference number: 5 (lower is better)
Translates to: LTALFPLLSNQDVRVVSTKGLKA*TASAPD
Trigger: ATCGGGAGCTGAAGCAGTCAATGCCTTGAGGCCTTT...AGTGGAAACAACTCTCACATCCTGGTTAGATAACAATGGGAAAAGTGCTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000417768.1
CDS-3UTR CAA 90 bp CACATGGCCCACTGCACTCATGCCAGAACGGTCTGTAAATATGATTGTACACCCTTAAGAGAATTTTCATaGATTTCCCTTTCTACGGGG +
Preference number: 5 (lower is better)
Translates to: HMAHCTHARTVCKYDCTPLREFS*ISLSTG
Trigger: CCCCGTAGAAAGGGAAATCAATGAAAATTCTCTTAA...GGGTGTACAATCATATTTACAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CAA 90 bp AAGGTCTTCATCAGGGTCCTTGAATCCAGTAAAGGAGTAATAAGACTTGTCCCATTCCACTCTCGAGACTaGTTCAAGGTCTTCATCAGG +
Preference number: 5 (lower is better)
Translates to: KVFIRVLESSKGVIRLVPFHSRD*FKVFIR
Trigger: CCTGATGAAGACCTTGAACAAGTCTCGAGAGTGGAA...TGGGACAAGTCTTATTACTCCTTTACTGGATTCAAGGACCCTGATGAAGACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CAA 90 bp ATTCATTCAGTAGCAAGAGCCCAAAAATGGTGTTCCAAGCCAAGATTCACCTTGCGAGTTCATGCAAGCTaGGAGCATATCTGTCACTGT +
Preference number: 5 (lower is better)
Translates to: IHSVARAQKWCSKPRFTLRVHAS*EHICHC
Trigger: ACAGTGACAGATATGCTCCAAGCTTGCATGAACTCG...CAAGGTGAATCTTGGCTTGGAACACCATTTTTGGGCTCTTGCTACTGAATGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR CAA 90 bp GTTCCTAGCATCACATGGCCCACTGCACTCATGCCAGAACGGTCTGTAAATATGACAAAGGTCTCCATCTaGCATAACAGAGTAAAAATG +
Preference number: 5 (lower is better)
Translates to: VPSITWPTALMPERSVNMTKVSI*HNRVKM
Trigger: CATTTTTACTCTGTTATGCAAGATGGAGACCTTTGT...CATATTTACAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CAA 90 bp GTTCCTAGCATCACATGGCCCACTGCACTCATGCCAGAACGGTCTGTAAATATGTCTTTTTATCTAGCCTaGCCAACCAACATCATAAGA +
Preference number: 5 (lower is better)
Translates to: VPSITWPTALMPERSVNMSFYLA*PTNIIR
Trigger: TCTTATGATGTTGGTTGGCAAGGCTAGATAAAAAGA...CATATTTACAGACCGTTCTGGCATGAGTGCAGTGGGCCATGTGATGCTAGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CAA 90 bp CATTCAGTAGCAAGAGCCCAAAAATGGTGTTCCAAGCCAAGATTCACCTTGTCCGGTTGGTTAAAAATATaGCCCGAAGGTATCTTAGGG +
Preference number: 5 (lower is better)
Translates to: HSVARAQKWCSKPRFTLSGWLKI*PEGILG
Trigger: CCCTAAGATACCTTCGGGCAATATTTTTAACCAACC...GGACAAGGTGAATCTTGGCTTGGAACACCATTTTTGGGCTCTTGCTACTGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR CAA 90 bp CATATACTATCAAATACTAGTCCCTGGAGAGACTGGGTGAGGAGTTGTCTTCAAAGACTGGGTGAGGAGTaGTCTTCAACATACTTCAGC +
Preference number: 5 (lower is better)
Translates to: HILSNTSPWRDWVRSCLQRLGEE*SSTYFS
Trigger: GCTGAAGTATGTTGAAGACAACTCCTCACCCAGTCT...TTGAAGACAACTCCTCACCCAGTCTCTCCAGGGACTAGTATTTGATAGTATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444602.2
CDS TCA 90 bp CAAAGAAATCTGGATGTACTGCAAAATAGAAAGGCCTCAAGGCATTaGCTGCTTCAGCTCCCGATAAAGCTCTTGAAAAGGGAAACCAGT +
Preference number: 5 (lower is better)
Translates to: QRNLDVLQNRKASRH*LLQLPIKLLKRETS
Trigger: ACTGGTTTCCCTTTTCAAGAGCTTTATCGGGAGCTGAAGCAGTCAATGCCTTGAGGCCTTTCTATTTTGCAGTACATCCAGATTTCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000342649.9
ENST00000383746.7
ENST00000396078.7
ENST00000412611.6
ENST00000417237.5
ENST00000417768.1
ENST00000431657.5
ENST00000444602.2
ENST00000462230.5
CDS-3UTR CAA 90 bp GACTTGTTCAAGGTCTTCATCAGGGTCCTTGAATCCAGTAAAGGAGTAATAAGACTCCCGATAAAGCTCTaGAAAAGGGAAACCAGTGTG +
Preference number: 5 (lower is better)
Translates to: DLFKVFIRVLESSKGVIRLPIKL*KRETSV
Trigger: CACACTGGTTTCCCTTTTCAAGAGCTTTATCGGGAG...TCTTATTACTCCTTTACTGGATTCAAGGACCCTGATGAAGACCTTGAACAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CAA 90 bp TTATTTGGTCTTCTAAAATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCAAAAGGCCTCAAGGCATaGACTGCTTCAGCTCCCGAT +
Preference number: 5 (lower is better)
Translates to: LFGLLKSSASSEGQNNLAKGLKA*TASAPD
Trigger: ATCGGGAGCTGAAGCAGTCAATGCCTTGAGGCCTTT...TGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATTTTAGAAGACCAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CAA 90 bp GGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTGAGATCCTTTTAGCTTCTTaGAGAGGCTGGGTATGCATA +
Preference number: 5 (lower is better)
Translates to: GANDRVSNISNNRKIVVEILLAS*RGWVCI
Trigger: TATGCATACCCAGCCTCTCAAAGAAGCTAAAAGGAT...CTCAACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CAA 90 bp GACTTGTTCAAGGTCTTCATCAGGGTCCTTGAATCCAGTAAAGGAGTAATAAGACGAGTTCATGCAAGCTaGGAGCATATCTGTCACTGT +
Preference number: 5 (lower is better)
Translates to: DLFKVFIRVLESSKGVIRRVHAS*EHICHC
Trigger: ACAGTGACAGATATGCTCCAAGCTTGCATGAACTCG...TCTTATTACTCCTTTACTGGATTCAAGGACCCTGATGAAGACCTTGAACAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412611.6
CDS-3UTR CAA 90 bp GCCGGGGCTAATGACAGGGTTTCAAACATCAGTAATAACAGGAAGATCGTGGTTACAACAATCCACCATTaGTATACTAGAAATGCTGGG +
Preference number: 5 (lower is better)
Translates to: AGANDRVSNISNNRKIVVTTIHH*YTRNAG
Trigger: CCCAGCATTTCTAGTATACAAATGGTGGATTGTTGT...AACCACGATCTTCCTGTTATTACTGATGTTTGAAACCCTGTCATTAGCCCCGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS GCA 90 bp ATGGGCCTGTCAGGCATCCTTTTAGCTTCTTTGAGAGGCTGGGTATaGATATTAGTATTCAAGCTTTGGATATGTTCAACAGATAAACGG +
Preference number: 5 (lower is better)
Translates to: MGLSGILLASLRGWV*ILVFKLWICSTDKR
Trigger: CCGTTTATCTGTTGAACATATCCAAAGCTTGAATACTAATATGCATACCCAGCCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
ENST00000462230.5
CDS-3UTR CAA 90 bp AATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCAATCTTTCAAAAAGTTTAAAGGCCTCAAGGCATaGACTGCTTCAGCTCCCGAT +
Preference number: 5 (lower is better)
Translates to: NHQPPLKVKITWQSFKKFKGLKA*TASAPD
Trigger: ATCGGGAGCTGAAGCAGTCAATGCCTTGAGGCCTTT...AAACTTTTTGAAAGATTGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CAA 90 bp CATTCAGTAGCAAGAGCCCAAAAATGGTGTTCCAAGCCAAGATTCACCTTGTCCTTAAGAGAATTTTCATaGATTTCCCTTTCTACGGGG +
Preference number: 5 (lower is better)
Translates to: HSVARAQKWCSKPRFTLSLREFS*ISLSTG
Trigger: CCCCGTAGAAAGGGAAATCAATGAAAATTCTCTTAA...GGACAAGGTGAATCTTGGCTTGGAACACCATTTTTGGGCTCTTGCTACTGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR CAA 90 bp ATTCATTCAGTAGCAAGAGCCCAAAAATGGTGTTCCAAGCCAAGATTCACCTTGGTGTGCAAAGTAAATTaGACTGCTCGAAATCCGGAA +
Preference number: 5 (lower is better)
Translates to: IHSVARAQKWCSKPRFTLVCKVN*TARNPE
Trigger: TTCCGGATTTCGAGCAGTCAAATTTACTTTGCACAC...CAAGGTGAATCTTGGCTTGGAACACCATTTTTGGGCTCTTGCTACTGAATGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342649.9
CDS-3UTR CAA 90 bp TTAACAGCACTTTTCCCATTGTTATCTAACCAGGATGTGAGAGTTGTTTCCACTTTCCACTCTCGAGACTaGTTCAAGGTCTTCATCAGG +
Preference number: 5 (lower is better)
Translates to: LTALFPLLSNQDVRVVSTFHSRD*FKVFIR
Trigger: CCTGATGAAGACCTTGAACAAGTCTCGAGAGTGGAA...AGTGGAAACAACTCTCACATCCTGGTTAGATAACAATGGGAAAAGTGCTGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000417768.1
CDS-3UTR CAA 90 bp CACTCTCGAGACTTGTTCAAGGTCTTCATCAGGGTCCTTGAATCCAGTAAAGGAATCTTTCAAAAAGTTTaGTCCAGTGGTGATGGACAT +
Preference number: 5 (lower is better)
Translates to: HSRDLFKVFIRVLESSKGIFQKV*SSGDGH
Trigger: ATGTCCATCACCACTGGACAAAACTTTTTGAAAGAT...TCCTTTACTGGATTCAAGGACCCTGATGAAGACCTTGAACAAGTCTCGAGAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CAA 90 bp CACTCTCGAGACTTGTTCAAGGTCTTCATCAGGGTCCTTGAATCCAGTAAAGGAATGTTTTCCATTGGATaGACTTTGCCCAGTAAATCT +
Preference number: 5 (lower is better)
Translates to: HSRDLFKVFIRVLESSKGMFSIG*TLPSKS
Trigger: AGATTTACTGGGCAAAGTCAATCCAATGGAAAACAT...TCCTTTACTGGATTCAAGGACCCTGATGAAGACCTTGAACAAGTCTCGAGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431657.5
CDS GCA 90 bp ATGGGCCTGTCAGGCATCCTTTTAGCTTCTTTGAGAGGCTGGGTATaGATATTAGTATTCAAGCTTTGGATATGTTCAACAGATAAACTG +
Preference number: 5 (lower is better)
Translates to: MGLSGILLASLRGWV*ILVFKLWICSTDKL
Trigger: CAGTTTATCTGTTGAACATATCCAAAGCTTGAATACTAATATGCATACCCAGCCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000417237.5
ENST00000494638.5
CDS CCA 90 bp CATTTGATGGGCCTGTCAGGCATCCTTTTAGCTTCTTTGAGAGGCTaGGTATGCATATTAGTATTCAAGCTTTGGATATGTTCAACAGAT +
Preference number: 5 (lower is better)
Translates to: HLMGLSGILLASLRG*VCILVFKLWICSTD
Trigger: ATCTGTTGAACATATCCAAAGCTTGAATACTAATATGCATACCCAGCCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCCCATCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000417237.5
ENST00000417768.1
ENST00000431657.5
ENST00000462230.5
ENST00000494638.5
CDS-3UTR CAA 90 bp ATCAATCACCTGTTTTGGACATTAACTGTCAATTACTGGCTGCAAAATATGTCTGGTGATGGACATCCATaGTTCCTAGCATCACATGGC +
Preference number: 5 (lower is better)
Translates to: INHLFWTLTVNYWLQNMSGDGHP*FLASHG
Trigger: GCCATGTGATGCTAGGAACAATGGATGTCCATCACC...AGACATATTTTGCAGCCAGTAATTGACAGTTAATGTCCAAAACAGGTGATTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CAA 90 bp ATTCATTCAGTAGCAAGAGCCCAAAAATGGTGTTCCAAGCCAAGATTCACCTTGACAACAATCCACCATTaGTATACTAGAAATGCTGGG +
Preference number: 5 (lower is better)
Translates to: IHSVARAQKWCSKPRFTLTTIHH*YTRNAG
Trigger: CCCAGCATTTCTAGTATACAAATGGTGGATTGTTGT...CAAGGTGAATCTTGGCTTGGAACACCATTTTTGGGCTCTTGCTACTGAATGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR CAA 90 bp AGAGTTGTTTCCACTCTCGAGACTTGTTCAAGGTCTTCATCAGGGTCCTTGAATACAAAGGTCTCCATCTaGCATAACAGAGTAAAAATG +
Preference number: 5 (lower is better)
Translates to: RVVSTLETCSRSSSGSLNTKVSI*HNRVKM
Trigger: CATTTTTACTCTGTTATGCAAGATGGAGACCTTTGT...ATTCAAGGACCCTGATGAAGACCTTGAACAAGTCTCGAGAGTGGAAACAACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CAA 90 bp AGAGTTGTTTCCACTCTCGAGACTTGTTCAAGGTCTTCATCAGGGTCCTTGAATTCTTTTTATCTAGCCTaGCCAACCAACATCATAAGA +
Preference number: 5 (lower is better)
Translates to: RVVSTLETCSRSSSGSLNSFYLA*PTNIIR
Trigger: TCTTATGATGTTGGTTGGCAAGGCTAGATAAAAAGA...ATTCAAGGACCCTGATGAAGACCTTGAACAAGTCTCGAGAGTGGAAACAACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CAA 90 bp ATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAAGGCGACACCATCAACCACTaGGGGTTGAATTCTATTGCT +
Preference number: 5 (lower is better)
Translates to: ILHLILFLRALWETGKQGDTINH*GLNSIA
Trigger: AGCAATAGAATTCAACCCCAAGTGGTTGATGGTGTC...GCCTTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CAA 90 bp AGACCACGTGCAAGTTTCCAGTTGTCATTTCACAGTGGAGTTTTACAGACAGTGAAAATCACTAGGGCATaGAAAACTCTTCCATGTATC +
Preference number: 5 (lower is better)
Translates to: RPRASFQLSFHSGVLQTVKITRA*KTLPCI
Trigger: GATACATGGAAGAGTTTTCAATGCCCTAGTGATTTT...CACTGTCTGTAAAACTCCACTGTGAAATGACAACTGGAAACTTGCACGTGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS GCA 90 bp CAGGAGTTGAGAATATATAACACTGTGCTTAGCAGATCTCTGGTGTaGAAAGTAAATTTGACTGCTCGAAATCCGGAAGTACTAAAAGGT +
Preference number: 5 (lower is better)
Translates to: QELRIYNTVLSRSLV*KVNLTARNPEVLKG
Trigger: ACCTTTTAGTACTTCCGGATTTCGAGCAGTCAAATTTACTTTGCACACCAGAGATCTGCTAAGCACAGTGTTATATATTCTCAACTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000417237.5
ENST00000494638.5
CDS CCA 90 bp AAATGCTATAAAATAACTGAAGAGGTTGCACTGTCTTATCACACTTaGGAGGCATACCGAGTCTTTAACTCACCCATTCATCACCACTTA +
Preference number: 5 (lower is better)
Translates to: KCYKITEEVALSYHT*EAYRVFNSPIHHHL
Trigger: TAAGTGGTGATGAATGGGTGAGTTAAAGACTCGGTATGCCTCCCAAGTGTGATAAGACAGTGCAACCTCTTCAGTTATTTTATAGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462612.1
CDS-3UTR CAA 90 bp AAGGTCTTCATCAGGGTCCTTGAATCCAGTAAAGGAGTAATAAGACTTGTCCCATTAAGAGAATTTTCATaGATTTCCCTTTCTACGGGG +
Preference number: 5 (lower is better)
Translates to: KVFIRVLESSKGVIRLVPLREFS*ISLSTG
Trigger: CCCCGTAGAAAGGGAAATCAATGAAAATTCTCTTAA...TGGGACAAGTCTTATTACTCCTTTACTGGATTCAAGGACCCTGATGAAGACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CAA 90 bp ATTCATTCAGTAGCAAGAGCCCAAAAATGGTGTTCCAAGCCAAGATTCACCTTGGATAAACTGCAGGAGTaGAGAATATATAACACTGTG +
Preference number: 5 (lower is better)
Translates to: IHSVARAQKWCSKPRFTLDKLQE*RIYNTV
Trigger: CACAGTGTTATATATTCTCAACTCCTGCAGTTTATC...CAAGGTGAATCTTGGCTTGGAACACCATTTTTGGGCTCTTGCTACTGAATGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342649.9
CDS-3UTR CAA 90 bp ATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAAGGCACAGCACTTTTCCCATaGTTATCTAACCAGGATGTG +
Preference number: 5 (lower is better)
Translates to: ILHLILFLRALWETGKQGTALFP*LSNQDV
Trigger: CACATCCTGGTTAGATAACAATGGGAAAAGTGCTGT...GCCTTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR CAA 90 bp TTAACAGCACTTTTCCCATTGTTATCTAACCAGGATGTGAGAGTTGTTTCCACTACAGCACTTTTCCCATaGTTATCTAACCAGGATGTG +
Preference number: 5 (lower is better)
Translates to: LTALFPLLSNQDVRVVSTTALFP*LSNQDV
Trigger: CACATCCTGGTTAGATAACAATGGGAAAAGTGCTGT...AGTGGAAACAACTCTCACATCCTGGTTAGATAACAATGGGAAAAGTGCTGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000417768.1
CDS-3UTR CAA 90 bp ATTCATTCAGTAGCAAGAGCCCAAAAATGGTGTTCCAAGCCAAGATTCACCTTGATCTTTCAAAAAGTTTaGTCCAGTGGTGATGGACAT +
Preference number: 5 (lower is better)
Translates to: IHSVARAQKWCSKPRFTLIFQKV*SSGDGH
Trigger: ATGTCCATCACCACTGGACAAAACTTTTTGAAAGAT...CAAGGTGAATCTTGGCTTGGAACACCATTTTTGGGCTCTTGCTACTGAATGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR CAA 90 bp ATTCATTCAGTAGCAAGAGCCCAAAAATGGTGTTCCAAGCCAAGATTCACCTTGTCTTTTTATCTAGCCTaGCCAACCAACATCATAAGA +
Preference number: 5 (lower is better)
Translates to: IHSVARAQKWCSKPRFTLSFYLA*PTNIIR
Trigger: TCTTATGATGTTGGTTGGCAAGGCTAGATAAAAAGA...CAAGGTGAATCTTGGCTTGGAACACCATTTTTGGGCTCTTGCTACTGAATGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342649.9
ENST00000412611.6
CDS-3UTR CAA 90 bp GACTTGTTCAAGGTCTTCATCAGGGTCCTTGAATCCAGTAAAGGAGTAATAAGACTTCTAGTCTTTCTCTaGGGCAAAATTGGTGGTTAT +
Preference number: 5 (lower is better)
Translates to: DLFKVFIRVLESSKGVIRLLVFL*GKIGGY
Trigger: ATAACCACCAATTTTGCCCAAGAGAAAGACTAGAAG...TCTTATTACTCCTTTACTGGATTCAAGGACCCTGATGAAGACCTTGAACAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CAA 90 bp ACCATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAAGACACCATCAACCACTaGGGGTTGAATTCTATTGCT +
Preference number: 5 (lower is better)
Translates to: TILHLILFLRALWETGKQDTINH*GLNSIA
Trigger: AGCAATAGAATTCAACCCCAAGTGGTTGATGGTGTC...TTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CAA 90 bp TTTGGTCTTCTAAAATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCAATCGGTTGGTTAAAAATATaGCCCGAAGGTATCTTAGGG +
Preference number: 5 (lower is better)
Translates to: FGLLKSSASSEGQNNLAIGWLKI*PEGILG
Trigger: CCCTAAGATACCTTCGGGCAATATTTTTAACCAACC...GATTGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATTTTAGAAGACCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412611.6
CDS-3UTR CAA 90 bp TCACTTCAGCTACTCAGTCTCAGCTCCCCAAATACCCAAGGTCAAATTAATACAAAAATCACTAGGGCATaGAAAACTCTTCCATGTATC +
Preference number: 5 (lower is better)
Translates to: SLQLLSLSSPNTQGQINTKITRA*KTLPCI
Trigger: GATACATGGAAGAGTTTTCAATGCCCTAGTGATTTT...TGTATTAATTTGACCTTGGGTATTTGGGGAGCTGAGACTGAGTAGCTGAAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS TCA 90 bp CTGTCACTGTTAAGGATCATTTGTAAACCACGCAAACTTCGAGGGTaGAATAGTATTCTACTTTTCAACAGTTTTTGTCCAGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: LSLLRIICKPRKLRG*NSILLFNSFCPVVM
Trigger: CATCACCACTGGACAAAAACTGTTGAAAAGTAGAATACTATTTCACCCTCGAAGTTTGCGTGGTTTACAAATGATCCTTAACAGTGACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469246.1
CDS-3UTR CAA 90 bp ATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAAGGCACAACAATCCACCATTaGTATACTAGAAATGCTGGG +
Preference number: 5 (lower is better)
Translates to: ILHLILFLRALWETGKQGTTIHH*YTRNAG
Trigger: CCCAGCATTTCTAGTATACAAATGGTGGATTGTTGT...GCCTTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CAA 90 bp TTTCTGTGTTACTTAATGGCTTCTCCATTCTTCCAATTCCAAGGAATACAAAGGACAGGAAGATCGTGGTaGAGAAGAGTGACAAGAAAT +
Preference number: 5 (lower is better)
Translates to: FLCYLMASPFFQFQGIQRTGRSW*RRVTRN
Trigger: ATTTCTTGTCACTCTTCTCAACCACGATCTTCCTGT...CCTTTGTATTCCTTGGAATTGGAAGAATGGAGAAGCCATTAAGTAACACAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CAA 90 bp GAGACTCTCATGCCTAGGAACAGCACATTCATGTATTTAAACTTTCAAACAGAATCTTCCTCCTTCCATTaGAAGTCCGGAAGTACTAAA +
Preference number: 5 (lower is better)
Translates to: ETLMPRNSTFMYLNFQTESSSFH*KSGSTK
Trigger: TTTAGTACTTCCGGACTTCAAATGGAAGGAGGAAGA...TTCTGTTTGAAAGTTTAAATACATGAATGTGCTGTTCCTAGGCATGAGAGTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444602.2
CDS-3UTR CAA 90 bp TTTGGTCTTCTAAAATCATCAGCCTCCTCTGAAGGTCAAAATAACTTGGCAATCATCTTTCAAAAAGTTTaGTCCAGTGGTGATGGACAT +
Preference number: 5 (lower is better)
Translates to: FGLLKSSASSEGQNNLAIIFQKV*SSGDGH
Trigger: ATGTCCATCACCACTGGACAAAACTTTTTGAAAGAT...GATTGCCAAGTTATTTTGACCTTCAGAGGAGGCTGATGATTTTAGAAGACCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000412611.6
ENST00000417768.1
ENST00000431657.5
CDS-3UTR CAA 90 bp TTTACAGCATTCTTCAGTATACCTGTTCCTTCACAAAAGGGCTATGAATTGACTTTAAGAGAATTTTCATaGATTTCCCTTTCTACGGGG +
Preference number: 5 (lower is better)
Translates to: FTAFFSIPVPSQKGYELTLREFS*ISLSTG
Trigger: CCCCGTAGAAAGGGAAATCAATGAAAATTCTCTTAA...AGTCAATTCATAGCCCTTTTGTGAAGGAACAGGTATACTGAAGAATGCTGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444602.2
CDS-3UTR CAA 90 bp ACCATTTTACACTTGATTCTATTTCTTAGAGCTCTTTGGGAAACAGGCAAGCAAACAAAGGTCTCCATCTaGCATAACAGAGTAAAAATG +
Preference number: 5 (lower is better)
Translates to: TILHLILFLRALWETGKQTKVSI*HNRVKM
Trigger: CATTTTTACTCTGTTATGCAAGATGGAGACCTTTGT...TTGCTTGCCTGTTTCCCAAAGAGCTCTAAGAAATAGAATCAAGTGTAAAATGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000431657.5
CDS-3UTR CAA 90 bp TATTTAATTCCTAGCCTAATCTTGACCCTGACTAACAGGAGCATACATCTATTAAACAATCTATCTCAGTaGCTTATGAGACTCTCATGC +
Preference number: 5 (lower is better)
Translates to: YLIPSLILTLTNRSIHLLNNLSQ*LMRLSC
Trigger: GCATGAGAGTCTCATAAGCAACTGAGATAGATTGTT...TAATAGATGTATGCTCCTGTTAGTCAGGGTCAAGATTAGGCTAGGAATTAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444602.2
CDS CCA 72 bp CGCACGGCCAGGCGCTCCCACCTGCCCTCGCCCCGGTaGGCGACAGGCTTTGACGGGCTCCTAGCCGCAGTG +
Preference number: 6 (lower is better)
Translates to: RTARRSHLPSPR*ATGFDGLLAAV
Trigger: CACTGCGGCTAGGAGCCCGTCAAAGCCTGTCGCCCACCGGGGCGAGGGCAGGTGGGAGCGCCTGGCCGTGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396078.7
CDS CCA 72 bp GGCTGTTCGGACGCGCATGCGCACTGGGGCGTCAGCTaGCCAACCAGCGCGCGACGCACGGCCAGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: GCSDAHAHWGVS*PTSARRTARRS
Trigger: GGAGCGCCTGGCCGTGCGTCGCGCGCTGGTTGGCCAGCTGACGCCCCAGTGCGCATGCGCGTCCGAACAGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396078.7
CDS GCA 72 bp ACAGTCGCTCCGCCCGCAGGGCTGTTCGGACGCGCATaGGCACTGGGGCGTCAGCTGGCCAACCAGCGCGCG +
Preference number: 6 (lower is better)
Translates to: TVAPPAGLFGRA*ALGRQLANQRA
Trigger: CGCGCGCTGGTTGGCCAGCTGACGCCCCAGTGCGCATGCGCGTCCGAACAGCCCTGCGGGCGGAGCGACTGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396078.7
CDS TCA 72 bp CTCGAGGCAAGCCCGGGCAGGGGGACGAGCTGCAGGTaGCGCCCTGGTTGGCTGGAGCGTGCCAGGCCTTCC +
Preference number: 6 (lower is better)
Translates to: LEASPGRGTSCR*RPGWLERARPS
Trigger: GGAAGGCCTGGCACGCTCCAGCCAACCAGGGCGTCACCTGCAGCTCGTCCCCCTGCCCGGGCTTGCCTCGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396078.7
CDS GCA 72 bp ATGGTCCGGCAGGTGGTGGGTCCTGACCCAAGGGCCTaGAAGGAACGGAGAAGGGCAACCGAGCACGCGCTG +
Preference number: 6 (lower is better)
Translates to: MVRQVVGPDPRA*KERRRATEHAL
Trigger: CAGCGCGTGCTCGGTTGCCCTTCTCCGTTCCTTGCAGGCCCTTGGGTCAGGACCCACCACCTGCCGGACCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383746.7
ENST00000417237.5
ENST00000494638.5
CDS TCA 72 bp GCGAGCACTCCGACTAGGCCGGAGGGACTCGGAAAATaGTGGTCCGGCAGGTGGTGGGTCCTGACCCAAGGG +
Preference number: 6 (lower is better)
Translates to: ASTPTRPEGLGK*WSGRWWVLTQG
Trigger: CCCTTGGGTCAGGACCCACCACCTGCCGGACCATCATTTTCCGAGTCCCTCCGGCCTAGTCGGAGTGCTCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383746.7
ENST00000417237.5
ENST00000494638.5
CDS TCA 72 bp GACTCGGAAAATGATGGTCCGGCAGGTGGTGGGTCCTaGCCCAAGGGCCTGCAAGGAACGGAGAAGGGCAAC +
Preference number: 6 (lower is better)
Translates to: DSENDGPAGGGS*PKGLQGTEKGN
Trigger: GTTGCCCTTCTCCGTTCCTTGCAGGCCCTTGGGTCAGGACCCACCACCTGCCGGACCATCATTTTCCGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383746.7
ENST00000417237.5
ENST00000494638.5
CDS GCA 72 bp GGGGAGAGCTCAGGAAGGTCTTCTCTAAGGAAATGGTaGCTTTCAGTTCTGGCAAGGGTCCGACGCGAGGGC +
Preference number: 6 (lower is better)
Translates to: GESSGRSSLRKW*LSVLARVRREG
Trigger: GCCCTCGCGTCGGACCCTTGCCAGAACTGAAAGGCACCATTTCCTTAGAGAAGACCTTCCTGAGCTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462612.1
CDS CCA 72 bp GGCATGGCTGCCTGCCGCTTCACAACGCCCAGATCTTaGGTTAGTCTTCAACCTTGTAAGAACAGAACCCAA +
Preference number: 6 (lower is better)
Translates to: GMAACRFTTPRS*VSLQPCKNRTQ
Trigger: TTGGGTTCTGTTCTTACAAGGTTGAAGACTAACCCAAGATCTGGGCGTTGTGAAGCGGCAGGCAGCCATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462612.1
CDS CCA 72 bp TTGGGTGCTCTCATTCAGACACTAGCTCCAAAAGTCTaGGACATCCACATCAACCGCAGGCTTCTCGTCTTC +
Preference number: 6 (lower is better)
Translates to: LGALIQTLAPKV*DIHINRRLLVF
Trigger: GAAGACGAGAAGCCTGCGGTTGATGTGGATGTCCCAGACTTTTGGAGCTAGTGTCTGAATGAGAGCACCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462612.1
CDS GCA 72 bp GTGAGAAATGCAAATTATCAGGTCCCATCCGAGTCCTaGAGAATCAGAATCTGGGTGGGATGGAGGAATCTG +
Preference number: 6 (lower is better)
Translates to: VRNANYQVPSES*RIRIWVGWRNL
Trigger: CAGATTCCTCCATCCCACCCAGATTCTGATTCTGCAGGACTCGGATGGGACCTGATAATTTGCATTTCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462612.1
CDS TCA 72 bp TTAGGGCAGTGGTTTTCAAAGCAGCAACAGCATCCGTaGGAAATGCAAATTATCAGGTCCCATCCGAGTCCT +
Preference number: 6 (lower is better)
Translates to: LGQWFSKQQQHP*EMQIIRSHPSP
Trigger: AGGACTCGGATGGGACCTGATAATTTGCATTTCTCACGGATGCTGTTGCTGCTTTGAAAACCACTGCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462612.1
CDS GCA 72 bp CTGACTGAAGACACATTGCTTCAGAGTAGAGTTGGGTaGTCTCATTCAGACACTAGCTCCAAAAGTCTGGGA +
Preference number: 6 (lower is better)
Translates to: LTEDTLLQSRVG*SHSDTSSKSLG
Trigger: TCCCAGACTTTTGGAGCTAGTGTCTGAATGAGAGCACCCAACTCTACTCTGAAGCAATGTGTCTTCAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462612.1
CDS CCA 72 bp TTGACTGCTCGAAATCCGGAAGTACTAAAAGGTTCCTaGCCATCGGAGGAACTCTGGTCTGTTTCTCTTACA +
Preference number: 6 (lower is better)
Translates to: LTARNPEVLKGS*PSEELWSVSLT
Trigger: TGTAAGAGAAACAGACCAGAGTTCCTCCGATGGCCAGGAACCTTTTAGTACTTCCGGATTTCGAGCAGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000417237.5
ENST00000494638.5
CDS TCA 72 bp TTCATATCAGTTTGTATTCCTGGAGCACACATTAACTaGTGTTGTAGGGGAGTGGTCCAGCAGCATGCATCA +
Preference number: 6 (lower is better)
Translates to: FISVCIPGAHIN*CCRGVVQQHAS
Trigger: TGATGCATGCTGCTGGACCACTCCCCTACAACATCAGTTAATGTGTGCTCCAGGAATACAAACTGATATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS TCA 72 bp CGCAGTAAATGCAATAATACAAACATGCACAGAATATaGGAAACTCCCAGACGCAACACTTGGAATGGGGCG +
Preference number: 6 (lower is better)
Translates to: RSKCNNTNMHRI*ETPRRNTWNGA
Trigger: CGCCCCATTCCAAGTGTTGCGTCTGGGAGTTTCTCATATTCTGTGCATGTTTGTATTATTGCATTTACTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462612.1
CDS CCA 72 bp TTCCTGGAGCACACATTAACTGATGTTGTAGGGGAGTaGTCCAGCAGCATGCATCATAAGGAAAAATCACTA +
Preference number: 6 (lower is better)
Translates to: FLEHTLTDVVGE*SSSMHHKEKSL
Trigger: TAGTGATTTTTCCTTATGATGCATGCTGCTGGACCACTCCCCTACAACATCAGTTAATGTGTGCTCCAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383746.7
ENST00000396078.7
CDS CAA 90 bp GACTTGTCCCATTTGATGGGCCTGTCAGGCATCCTTTTAGCTTCTTaGAGAGGCTGGGTATGCATATTAGTATTCAAGCTTTGGATATGT +
Preference number: 6 (lower is better)
Translates to: DLSHLMGLSGILLAS*RGWVCILVFKLWIC
Trigger: ACATATCCAAAGCTTGAATACTAATATGCATACCCAGCCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCCCATCAAATGGGACAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000417237.5
ENST00000417768.1
ENST00000431657.5
ENST00000462230.5
CDS CCA 72 bp GGCCTGTCAGGCATCCTTTTAGCTTCTTTGAGAGGCTaGGTATGCATATTAGTATTCAAGCTTTGGATATGT +
Preference number: 6 (lower is better)
Translates to: GLSGILLASLRG*VCILVFKLWIC
Trigger: ACATATCCAAAGCTTGAATACTAATATGCATACCCAGCCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000417237.5
ENST00000417768.1
ENST00000431657.5
ENST00000462230.5
ENST00000494638.5
CDS CAA 72 bp CATTTGATGGGCCTGTCAGGCATCCTTTTAGCTTCTTaGAGAGGCTGGGTATGCATATTAGTATTCAAGCTT +
Preference number: 6 (lower is better)
Translates to: HLMGLSGILLAS*RGWVCILVFKL
Trigger: AAGCTTGAATACTAATATGCATACCCAGCCTCTCAAAGAAGCTAAAAGGATGCCTGACAGGCCCATCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000417237.5
ENST00000417768.1
ENST00000431657.5
ENST00000462230.5
ENST00000494638.5
CDS CCA 72 bp AAAATAACTGAAGAGGTTGCACTGTCTTATCACACTTaGGAGGCATACCGAGTCTTTAACTCACCCATTCAT +
Preference number: 6 (lower is better)
Translates to: KITEEVALSYHT*EAYRVFNSPIH
Trigger: ATGAATGGGTGAGTTAAAGACTCGGTATGCCTCCCAAGTGTGATAAGACAGTGCAACCTCTTCAGTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462612.1
CDS CAA 72 bp AGAAAATCAAATTACTATCAGCTGACTGAAGACACATaGCTTCAGAGTAGAGTTGGGTGCTCTCATTCAGAC +
Preference number: 6 (lower is better)
Translates to: RKSNYYQLTEDT*LQSRVGCSHSD
Trigger: GTCTGAATGAGAGCACCCAACTCTACTCTGAAGCAATGTGTCTTCAGTCAGCTGATAGTAATTTGATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462612.1
CDS TCA 72 bp AGCTTTGGATATGTTCAACAGATAAACTGCAGGAGTTaGGAATATATAACACTGTGCTTAGCAGATCTCTGG +
Preference number: 6 (lower is better)
Translates to: SFGYVQQINCRS*EYITLCLADLW
Trigger: CCAGAGATCTGCTAAGCACAGTGTTATATATTCTCAACTCCTGCAGTTTATCTGTTGAACATATCCAAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000417237.5
ENST00000494638.5
CDS GCA 72 bp AGAATATATAACACTGTGCTTAGCAGATCTCTGGTGTaGAAAGTAAATTTGACTGCTCGAAATCCGGAAGTA +
Preference number: 6 (lower is better)
Translates to: RIYNTVLSRSLV*KVNLTARNPEV
Trigger: TACTTCCGGATTTCGAGCAGTCAAATTTACTTTGCACACCAGAGATCTGCTAAGCACAGTGTTATATATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000417237.5
ENST00000494638.5
CDS GCA 72 bp TCAGGCATCCTTTTAGCTTCTTTGAGAGGCTGGGTATaGATATTAGTATTCAAGCTTTGGATATGTTCAACA +
Preference number: 6 (lower is better)
Translates to: SGILLASLRGWV*ILVFKLWICST
Trigger: TGTTGAACATATCCAAAGCTTGAATACTAATATGCATACCCAGCCTCTCAAAGAAGCTAAAAGGATGCCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342649.9
ENST00000412611.6
ENST00000417237.5
ENST00000417768.1
ENST00000431657.5
ENST00000462230.5
ENST00000494638.5
CDS CAA 72 bp AAGCTTTGGATATGTTCAACAGATAAACTGCAGGAGTaGAGAATATATAACACTGTGCTTAGCAGATCTCTG +
Preference number: 6 (lower is better)
Translates to: KLWICSTDKLQE*RIYNTVLSRSL
Trigger: CAGAGATCTGCTAAGCACAGTGTTATATATTCTCAACTCCTGCAGTTTATCTGTTGAACATATCCAAAGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000417237.5
ENST00000494638.5
CDS CAA 90 bp TTAGTATTCAAGCTTTGGATATGTTCAACAGATAAACTGCAGGAGTaGAGAATATATAACACTGTGCTTAGCAGATCTCTGGTGTGCAAA +
Preference number: 6 (lower is better)
Translates to: LVFKLWICSTDKLQE*RIYNTVLSRSLVCK
Trigger: TTTGCACACCAGAGATCTGCTAAGCACAGTGTTATATATTCTCAACTCCTGCAGTTTATCTGTTGAACATATCCAAAGCTTGAATACTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342649.9
ENST00000417237.5
ENST00000494638.5
CDS CAA 72 bp AAGAATAAGAATGAAAAACCGAGTACTATGAGTCTTTaGAGTATTTCCTGTAAGCTCTTCAAGAATGGGCTC +
Preference number: 6 (lower is better)
Translates to: KNKNEKPSTMSL*SISCKLFKNGL
Trigger: GAGCCCATTCTTGAAGAGCTTACAGGAAATACTCAAAAGACTCATAGTACTCGGTTTTTCATTCTTATTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462612.1
CDS TCA 72 bp TTAAGGATCATTTGTAAACCACGCAAACTTCGAGGGTaGAATAGTATTCTACTTTTCAACAGTTTTTGTCCA +
Preference number: 6 (lower is better)
Translates to: LRIICKPRKLRG*NSILLFNSFCP
Trigger: TGGACAAAAACTGTTGAAAAGTAGAATACTATTTCACCCTCGAAGTTTGCGTGGTTTACAAATGATCCTTAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469246.1