Pregenerated sensors for TCAF1 (Homo sapiens)
Ensembl gene IDs: ENSG00000198420Ensembl transcript IDs: ENST00000355951.2, ENST00000460532.5, ENST00000478172.1, ENST00000479870.6, ENST00000485416.1, ENST00000491908.1
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGGGTGCAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTACCATCATGGCTCACTaGAGCCTTGAACTCCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: RVQRRLSENLPDRKCLHFTIMAH*SLELLG Trigger: GCCCAGGAGTTCAAGGCTTCAGTGAGCCATGATGGT...AAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTGCACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| 3UTR-3UTR CCA 90 bp | CTTGACAGTCTGCCTTACTATGAAATTCTAGGTACAAAAATTTTCCTTAAGCTCTGGGCCCTCTCAATCTaGAGACTTAGCTTGCTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: LDSLPYYEILGTKIFLKLWALSI*RLSLLC Trigger: ACAGAGCAAGCTAAGTCTCCAGATTGAGAGGGCCCA...GAGCTTAAGGAAAATTTTTGTACCTAGAATTTCATAGTAAGGCAGACTGTCAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| 3UTR-3UTR GCA 90 bp | GAGAGATTCCCTCAACTTTATTTTCCAGACTGTATACCAAATACTTTTAGCAGTGGCATGGGTTTCCTCTaGTGTTGTACAGTTAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: ERFPQLYFPDCIPNTFSSGMGFL*CCTVRS Trigger: AGACCTAACTGTACAACAGCAGAGGAAACCCATGCC...ACTGCTAAAAGTATTTGGTATACAGTCTGGAAAATAAAGTTGAGGGAATCTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| 3UTR CAA 90 bp | CAAGATACTTCCTCAGTAAGGGTGCAAAGGAGACTTTCTGAAAATTaGCCTGACAGAAAATGTCTTCACTTTGATGTTCTTCTTGACAGT | + |
|
Preference number: 2 (lower is better) Translates to: QDTSSVRVQRRLSEN*PDRKCLHFDVLLDS Trigger: ACTGTCAAGAAGAACATCAAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTGCACCCTTACTGAGGAAGTATCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| 3UTR CAA 90 bp | ATGCTGAGATCCTCTCCACTTATAACCAAATCCCTTCAGTTTTCTTaGCTGAGATGTGTCAGTTCCTTTTTGCATTTCTTGACTTCAATT | + |
|
Preference number: 2 (lower is better) Translates to: MLRSSPLITKSLQFS*LRCVSSFLHFLTSI Trigger: AATTGAAGTCAAGAAATGCAAAAAGGAACTGACACATCTCAGCAAAGAAAACTGAAGGGATTTGGTTATAAGTGGAGAGGATCTCAGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000355951.2 ENST00000479870.6 |
||
| 3UTR-3UTR CCA 90 bp | CTTGACAGTCTGCCTTACTATGAAATTCTAGGTACAAAAATTTTCCTTAAGCTCAACTTGTATAACAGTTaGCATGGGTTTCCTCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LDSLPYYEILGTKIFLKLNLYNS*HGFPLL Trigger: CAGCAGAGGAAACCCATGCCAACTGTTATACAAGTT...GAGCTTAAGGAAAATTTTTGTACCTAGAATTTCATAGTAAGGCAGACTGTCAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| 3UTR-3UTR TCA 90 bp | GAGAGATTCCCTCAACTTTATTTTCCAGACTGTATACCAAATACTTTTAGCAGTCCTAATTCTACCTCGTaGCTTTTCTTATTCCTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: ERFPQLYFPDCIPNTFSSPNSTS*LFLFLF Trigger: GAAGAGGAATAAGAAAAGTCACGAGGTAGAATTAGG...ACTGCTAAAAGTATTTGGTATACAGTCTGGAAAATAAAGTTGAGGGAATCTCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| 3UTR-3UTR TCA 90 bp | CTTGACAGTCTGCCTTACTATGAAATTCTAGGTACAAAAATTTTCCTTAAGCTCTTCAGTTTTCTTTGCTaGGATGTGTCAGTTCCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: LDSLPYYEILGTKIFLKLFSFLC*DVSVPF Trigger: AAAAGGAACTGACACATCTCAGCAAAGAAAACTGAA...GAGCTTAAGGAAAATTTTTGTACCTAGAATTTCATAGTAAGGCAGACTGTCAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| 3UTR-3UTR GCA 90 bp | CAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTGATGTTTCTGGAGACTTAGCTTaGTCTGTTCTTCAATTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: QRRLSENLPDRKCLHFDVSGDLA*SVLQFF Trigger: AAAGAATTGAAGAACAGAGCAAGCTAAGTCTCCAGA...AACATCAAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGATTCCCTCAACTTTATTTTCCAGACTGTATACCAAATACTTTTAGCAGTTGTAGAGACGGGATGTaGCCATCTTGCCTAGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ERFPQLYFPDCIPNTFSSCRDGM*PSCLGW Trigger: CCAGCCTAGGCAAGATGGCAACATCCCGTCTCTACA...ACTGCTAAAAGTATTTGGTATACAGTCTGGAAAATAAAGTTGAGGGAATCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| 3UTR GCA 72 bp | CTGTTAACTTGTATAACAGTTGGCATGGGTTTCCTCTaGTGTTGTACAGTTAGGTCTGTTTCTTCAGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LLTCITVGMGFL*CCTVRSVSSGN Trigger: GTTTCCTGAAGAAACAGACCTAACTGTACAACAGCAGAGGAAACCCATGCCAACTGTTATACAAGTTAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| 3UTR-3UTR CAA 90 bp | AGGGTGCAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTCTTTCCACATTGTCTTaGTTTCCCTCAGAGTTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: RVQRRLSENLPDRKCLHFLSTLS*FPSEFV Trigger: GACAAACTCTGAGGGAAACAAAGACAATGTGGAAAG...AAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTGCACCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| 3UTR CCA 72 bp | GTGTCTAGATGTAGATTGTATTGGGCCCTCTCAATCTaGAGACTTAGCTTGCTCTGTTCTTCAATTCTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: VSRCRLYWALSI*RLSLLCSSILF Trigger: AAAAAGAATTGAAGAACAGAGCAAGCTAAGTCTCCAGATTGAGAGGGCCCAATACAATCTACATCTAGACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTGATGTTTCCCTTCAGTTTTCTTaGCTGAGATGTGTCAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: QRRLSENLPDRKCLHFDVSLQFS*LRCVSS Trigger: GGAACTGACACATCTCAGCAAAGAAAACTGAAGGGA...AACATCAAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| 3UTR-3UTR CAA 90 bp | AGGGTGCAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTATCTGGAGACTTAGCTaGCTCTGTTCTTCAATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: RVQRRLSENLPDRKCLHFIWRLS*LCSSIL Trigger: AAGAATTGAAGAACAGAGCAAGCTAAGTCTCCAGAT...AAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTGCACCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGATTCCCTCAACTTTATTTTCCAGACTGTATACCAAATACTTTTAGCAGTGTTATTCTTTCCACATaGTCTTTGTTTCCCTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: ERFPQLYFPDCIPNTFSSVILST*SLFPSE Trigger: CTCTGAGGGAAACAAAGACAATGTGGAAAGAATAAC...ACTGCTAAAAGTATTTGGTATACAGTCTGGAAAATAAAGTTGAGGGAATCTCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTGATGTTTTCTGGCATTCAGTGTaGCTGATGACAAATCTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: QRRLSENLPDRKCLHFDVFWHSV*LMTNLL Trigger: TAACAGATTTGTCATCAGCAACACTGAATGCCAGAA...AACATCAAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR GCA 90 bp | GAGAGATTCCCTCAACTTTATTTTCCAGACTGTATACCAAATACTTTTAGCAGTTGCCCCGCTGTTCCCTaGAGCGCGGGTTCGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ERFPQLYFPDCIPNTFSSCPAVP*SAGSGQ Trigger: CTGCCCCGAACCCGCGCTGCAGGGAACAGCGGGGCA...ACTGCTAAAAGTATTTGGTATACAGTCTGGAAAATAAAGTTGAGGGAATCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR GCA 90 bp | AGGGTGCAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTACCCCACTCACTGTTTaGCCCGCTGTTCCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RVQRRLSENLPDRKCLHFTPLTV*PAVPCS Trigger: GCTGCAGGGAACAGCGGGGCAAACAGTGAGTGGGGT...AAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTGCACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CCA 90 bp | AGGGTGCAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTACCGCGGGCCTCTCCTaGTCCAGAGTCTACGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RVQRRLSENLPDRKCLHFTAGLS*SRVYAE Trigger: TTCAGCGTAGACTCTGGACCAGGAGAGGCCCGCGGT...AAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTGCACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CCA 90 bp | AGGGTGCAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTTCGCCATGGCTCTATTaGTTTCCGGGGCCCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVQRRLSENLPDRKCLHFSPWLY*FPGPRP Trigger: AGGCCTGGGCCCCGGAAACCAATAGAGCCATGGCGA...AAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTGCACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR GCA 90 bp | AGGGTGCAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTGCAAAGCCACCCCACTaGGTTCAGGAGAAAGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RVQRRLSENLPDRKCLHFAKPPH*VQEKGR Trigger: ACGCCCTTTCTCCTGAACGCAGTGGGGTGGCTTTGC...AAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTGCACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR TCA 90 bp | AGGGTGCAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTGTCCAGAGTCTACGCTaGACCCCACTCACTGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RVQRRLSENLPDRKCLHFVQSLR*TPLTVC Trigger: GCAAACAGTGAGTGGGGTTCAGCGTAGACTCTGGAC...AAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTGCACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CCA 90 bp | AGGGTGCAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTAGCCCTCGAGGATTTTaGCCAAAGGTGCCAGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RVQRRLSENLPDRKCLHFSPRGF*PKVPGM Trigger: CATCCCTGGCACCTTTGGCCAAAATCCTCGAGGGCT...AAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTGCACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CCA 90 bp | CTTGACAGTCTGCCTTACTATGAAATTCTAGGTACAAAAATTTTCCTTAAGCTCCATCCTCCCCCTGGTTaGCCCAATCCCAGGCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LDSLPYYEILGTKIFLKLHPPPG*PNPRLV Trigger: GACAAGCCTGGGATTGGGCCAACCAGGGGGAGGATG...GAGCTTAAGGAAAATTTTTGTACCTAGAATTTCATAGTAAGGCAGACTGTCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR TCA 90 bp | CAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTGATGTTTCAGGAGAAAGGGCGTaGGCTGGGCTTCCACCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QRRLSENLPDRKCLHFDVSGERA*AGLPPS Trigger: ACTTGGTGGAAGCCCAGCTCACGCCCTTTCTCCTGA...AACATCAAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CCA 90 bp | CTTGACAGTCTGCCTTACTATGAAATTCTAGGTACAAAAATTTTCCTTAAGCTCATGGGTGTACACCAATaGGAGCCCCAGGGGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LDSLPYYEILGTKIFLKLMGVHQ*EPQGKS Trigger: GCTCTTCCCCTGGGGCTCCCATTGGTGTACACCCAT...GAGCTTAAGGAAAATTTTTGTACCTAGAATTTCATAGTAAGGCAGACTGTCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CCA 90 bp | CAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTGATGTTCTTTCATCCTCCCCCTaGTTGGCCCAATCCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QRRLSENLPDRKCLHFDVLSSSP*LAQSQA Trigger: AGCCTGGGATTGGGCCAACCAGGGGGAGGATGAAAG...AACATCAAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CCA 90 bp | GAGAGATTCCCTCAACTTTATTTTCCAGACTGTATACCAAATACTTTTAGCAGTCAGAGGGAGTCGCCATaGCTCTATTGGTTTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ERFPQLYFPDCIPNTFSSQRESP*LYWFPG Trigger: CCCCGGAAACCAATAGAGCCATGGCGACTCCCTCTG...ACTGCTAAAAGTATTTGGTATACAGTCTGGAAAATAAAGTTGAGGGAATCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR TCA 90 bp | CAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTGATGTTAGGCTTGTCCTCCTATaGGCAAGCCGCCACCACATT | + |
|
Preference number: 4 (lower is better) Translates to: QRRLSENLPDRKCLHFDVRLVLL*ASRHHI Trigger: AATGTGGTGGCGGCTTGCTCATAGGAGGACAAGCCT...AACATCAAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR TCA 90 bp | GAGAGATTCCCTCAACTTTATTTTCCAGACTGTATACCAAATACTTTTAGCAGTACCATCATGGCTCACTaGAGCCTTGAACTCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ERFPQLYFPDCIPNTFSSTIMAH*SLELLG Trigger: GCCCAGGAGTTCAAGGCTTCAGTGAGCCATGATGGT...ACTGCTAAAAGTATTTGGTATACAGTCTGGAAAATAAAGTTGAGGGAATCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR GCA 90 bp | GAGAGATTCCCTCAACTTTATTTTCCAGACTGTATACCAAATACTTTTAGCAGTATGGGGTACCCTGCATaGATCCAGCCCACTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: ERFPQLYFPDCIPNTFSSMGYPA*IQPTEI Trigger: GATCTCAGTGGGCTGGATGCATGCAGGGTACCCCAT...ACTGCTAAAAGTATTTGGTATACAGTCTGGAAAATAAAGTTGAGGGAATCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CCA 90 bp | CAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTGATGTTCAAAGGTGCCAGGGATaGGTGTACACCAATGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QRRLSENLPDRKCLHFDVQRCQG*VYTNGS Trigger: GCTCCCATTGGTGTACACCCATCCCTGGCACCTTTG...AACATCAAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CCA 90 bp | CAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTGATGTTAAATGCCAGCCACACTaGTCACGAGGTTCCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QRRLSENLPDRKCLHFDVKCQPH*SRGSQG Trigger: TCCCTGGGAACCTCGTGACCAGTGTGGCTGGCATTT...AACATCAAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR TCA 90 bp | GAGAGATTCCCTCAACTTTATTTTCCAGACTGTATACCAAATACTTTTAGCAGTGGTTCCCAGGGAACGTaGACAGAACCCTTTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ERFPQLYFPDCIPNTFSSGSQGT*TEPFHP Trigger: AGGATGAAAGGGTTCTGTTCACGTTCCCTGGGAACC...ACTGCTAAAAGTATTTGGTATACAGTCTGGAAAATAAAGTTGAGGGAATCTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR GCA 90 bp | CTTGACAGTCTGCCTTACTATGAAATTCTAGGTACAAAAATTTTCCTTAAGCTCGATTTTGGCCAAAGGTaGCAGGGATGGGTGTACACC | + |
|
Preference number: 4 (lower is better) Translates to: LDSLPYYEILGTKIFLKLDFGQR*QGWVYT Trigger: GGTGTACACCCATCCCTGGCACCTTTGGCCAAAATC...GAGCTTAAGGAAAATTTTTGTACCTAGAATTTCATAGTAAGGCAGACTGTCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR GCA 90 bp | CAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTGATGTTTTCTGGCTCAACCTTTaGATCCACTCCAGAGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QRRLSENLPDRKCLHFDVFWLNL*IHSRAL Trigger: GAGGGCTCTGGAGTGGATGCAAAGGTTGAGCCAGAA...AACATCAAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR GCA 90 bp | AGGGTGCAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTGGCATGGGTTTCCTCTaGTGTTGTACAGTTAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RVQRRLSENLPDRKCLHFGMGFL*CCTVRS Trigger: AGACCTAACTGTACAACAGCAGAGGAAACCCATGCC...AAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTGCACCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CCA 90 bp | CAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTGATGTTGCAATATCTGGTGCCTaGATTGGTGCAGTTGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: QRRLSENLPDRKCLHFDVAISGA*IGAVDL Trigger: GAGGTCAACTGCACCAATCCAGGCACCAGATATTGC...AACATCAAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CCA 90 bp | GAGAGATTCCCTCAACTTTATTTTCCAGACTGTATACCAAATACTTTTAGCAGTTGGGCCCTCTCAATCTaGAGACTTAGCTTGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ERFPQLYFPDCIPNTFSSWALSI*RLSLLC Trigger: ACAGAGCAAGCTAAGTCTCCAGATTGAGAGGGCCCA...ACTGCTAAAAGTATTTGGTATACAGTCTGGAAAATAAAGTTGAGGGAATCTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CCA 90 bp | CTTGACAGTCTGCCTTACTATGAAATTCTAGGTACAAAAATTTTCCTTAAGCTCGGAGTCTTTCACTTCTaGCTCAACCTTTGCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LDSLPYYEILGTKIFLKLGVFHF*LNLCIH Trigger: GTGGATGCAAAGGTTGAGCCAGAAGTGAAAGACTCC...GAGCTTAAGGAAAATTTTTGTACCTAGAATTTCATAGTAAGGCAGACTGTCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CCA 90 bp | GAGAGATTCCCTCAACTTTATTTTCCAGACTGTATACCAAATACTTTTAGCAGTCCAACACTGGGATCTTaGGCATCTTCTTGGAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: ERFPQLYFPDCIPNTFSSPTLGS*ASSWRL Trigger: AAGTCTCCAAGAAGATGCCCAAGATCCCAGTGTTGG...ACTGCTAAAAGTATTTGGTATACAGTCTGGAAAATAAAGTTGAGGGAATCTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CCA 90 bp | GAGAGATTCCCTCAACTTTATTTTCCAGACTGTATACCAAATACTTTTAGCAGTTCATCCAGCAATATCTaGTGCCTGGATTGGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ERFPQLYFPDCIPNTFSSSSSNI*CLDWCS Trigger: ACTGCACCAATCCAGGCACCAGATATTGCTGGATGA...ACTGCTAAAAGTATTTGGTATACAGTCTGGAAAATAAAGTTGAGGGAATCTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR TCA 90 bp | CAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTGATGTTCACCATCACAGGAAATaGAGCCTCTCCAATAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QRRLSENLPDRKCLHFDVHHHRK*SLSNKK Trigger: CTTCTTATTGGAGAGGCTTCATTTCCTGTGATGGTG...AACATCAAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR TCA 90 bp | AGGGTGCAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTAAGTATCTCTACCTTTaGTTCCACTTCTCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RVQRRLSENLPDRKCLHFKYLYL*FHFSSS Trigger: AGAGGAAGAGAAGTGGAATCAAAGGTAGAGATACTT...AAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTGCACCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CCA 90 bp | CTTGACAGTCTGCCTTACTATGAAATTCTAGGTACAAAAATTTTCCTTAAGCTCAAGAAGCAGTTCACATaGAACAGCATCTTCGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LDSLPYYEILGTKIFLKLKKQFT*NSIFGY Trigger: GTACCCGAAGATGCTGTTCCATGTGAACTGCTTCTT...GAGCTTAAGGAAAATTTTTGTACCTAGAATTTCATAGTAAGGCAGACTGTCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CCA 90 bp | CTTGACAGTCTGCCTTACTATGAAATTCTAGGTACAAAAATTTTCCTTAAGCTCCAACCAAAGGCTTCCTaGAGCTGTAAATACGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LDSLPYYEILGTKIFLKLQPKAS*SCKYVS Trigger: GGAAACGTATTTACAGCTCCAGGAAGCCTTTGGTTG...GAGCTTAAGGAAAATTTTTGTACCTAGAATTTCATAGTAAGGCAGACTGTCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR TCA 90 bp | GAGAGATTCCCTCAACTTTATTTTCCAGACTGTATACCAAATACTTTTAGCAGTCCTTTTTGCATTTCTTaGCTTCAATTTCAGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ERFPQLYFPDCIPNTFSSPFCIS*LQFQWG Trigger: GCCCCACTGAAATTGAAGTCAAGAAATGCAAAAAGG...ACTGCTAAAAGTATTTGGTATACAGTCTGGAAAATAAAGTTGAGGGAATCTCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR TCA 90 bp | AGGGTGCAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTCAGAAGGACTTAAAATaGAAAACACAGTTTCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: RVQRRLSENLPDRKCLHFQKDLK*KTQFPI Trigger: GATGGGAAACTGTGTTTTTCATTTTAAGTCCTTCTG...AAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTGCACCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CCA 90 bp | GAGAGATTCCCTCAACTTTATTTTCCAGACTGTATACCAAATACTTTTAGCAGTACAACTAACCAACACTaGGATCTTGGGCATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ERFPQLYFPDCIPNTFSSTTNQH*DLGHLL Trigger: AAGAAGATGCCCAAGATCCCAGTGTTGGTTAGTTGT...ACTGCTAAAAGTATTTGGTATACAGTCTGGAAAATAAAGTTGAGGGAATCTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CCA 90 bp | GAGAGATTCCCTCAACTTTATTTTCCAGACTGTATACCAAATACTTTTAGCAGTAACTTGTATAACAGTTaGCATGGGTTTCCTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERFPQLYFPDCIPNTFSSNLYNS*HGFPLL Trigger: CAGCAGAGGAAACCCATGCCAACTGTTATACAAGTT...ACTGCTAAAAGTATTTGGTATACAGTCTGGAAAATAAAGTTGAGGGAATCTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CCA 90 bp | AGGGTGCAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTTCATCCTCATTTTGCTaGAGAATTTCCTCAAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: RVQRRLSENLPDRKCLHFSSSFC*RISSRY Trigger: GTATCTTGAGGAAATTCTCCAGCAAAATGAGGATGA...AAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTGCACCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR TCA 90 bp | CTTGACAGTCTGCCTTACTATGAAATTCTAGGTACAAAAATTTTCCTTAAGCTCAAGATGTTGATCCATTaGCTTCTGGCATTCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LDSLPYYEILGTKIFLKLKMLIH*LLAFSV Trigger: AACACTGAATGCCAGAAGTCAATGGATCAACATCTT...GAGCTTAAGGAAAATTTTTGTACCTAGAATTTCATAGTAAGGCAGACTGTCAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR TCA 90 bp | CAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTGATGTTTCTTGTTCCATTAACTaGAGATCTTTTCATCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QRRLSENLPDRKCLHFDVSCSIN*RSFHPH Trigger: GTGGGGATGAAAAGATCTTCAGTTAATGGAACAAGA...AACATCAAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CCA 90 bp | CTTGACAGTCTGCCTTACTATGAAATTCTAGGTACAAAAATTTTCCTTAAGCTCCCAGCTTTTCTGTCATaGTTTCATTGTAGGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LDSLPYYEILGTKIFLKLPAFLS*FHCRHQ Trigger: TTGATGCCTACAATGAAACCATGACAGAAAAGCTGG...GAGCTTAAGGAAAATTTTTGTACCTAGAATTTCATAGTAAGGCAGACTGTCAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR TCA 90 bp | GAGAGATTCCCTCAACTTTATTTTCCAGACTGTATACCAAATACTTTTAGCAGTTTCAGTTTTCTTTGCTaGGATGTGTCAGTTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ERFPQLYFPDCIPNTFSSFSFLC*DVSVPF Trigger: AAAAGGAACTGACACATCTCAGCAAAGAAAACTGAA...ACTGCTAAAAGTATTTGGTATACAGTCTGGAAAATAAAGTTGAGGGAATCTCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR GCA 90 bp | GAGAGATTCCCTCAACTTTATTTTCCAGACTGTATACCAAATACTTTTAGCAGTTCTGGAGACTTAGCTTaGTCTGTTCTTCAATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ERFPQLYFPDCIPNTFSSSGDLA*SVLQFF Trigger: AAAGAATTGAAGAACAGAGCAAGCTAAGTCTCCAGA...ACTGCTAAAAGTATTTGGTATACAGTCTGGAAAATAAAGTTGAGGGAATCTCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| 3UTR CAA 72 bp | ATTCCAAAATTTTACAATATTGTGTCTAGATGTAGATaGTATTGGGCCCTCTCAATCTGGAGACTTAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IPKFYNIVSRCR*YWALSIWRLSL Trigger: CAAGCTAAGTCTCCAGATTGAGAGGGCCCAATACAATCTACATCTAGACACAATATTGTAAAATTTTGGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| 3UTR CAA 72 bp | TTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTaGATGTTCTTCTTGACAGTCTGCCTTACTATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FLKICLTENVFT*MFFLTVCLTMK Trigger: TTTCATAGTAAGGCAGACTGTCAAGAAGAACATCAAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR GCA 90 bp | CTTGACAGTCTGCCTTACTATGAAATTCTAGGTACAAAAATTTTCCTTAAGCTCTTTTCATCCTCATTTTaGTGGAGAATTTCCTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LDSLPYYEILGTKIFLKLFSSSF*WRISSR Trigger: TCTTGAGGAAATTCTCCAGCAAAATGAGGATGAAAA...GAGCTTAAGGAAAATTTTTGTACCTAGAATTTCATAGTAAGGCAGACTGTCAAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CCA 90 bp | CAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTGATGTTTTTTTGCTCTTTATCTaGAGAGATTCCCTCAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: QRRLSENLPDRKCLHFDVFLLFI*RDSLNF Trigger: AAAGTTGAGGGAATCTCTCCAGATAAAGAGCAAAAA...AACATCAAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTG 34% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS CCA 90 bp | GGCCCAAAGCCAGTCAGGTCACCCTGCGATTTCCACGGGGGCAGGTaGGAGCGGGCAGAGCCTGGCGCAGAGAGGAATGCACAGGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GPKPVRSPCDFHGGR*ERAEPGAERNAQGR Trigger: TCTTCCCTGTGCATTCCTCTCTGCGCCAGGCTCTGCCCGCTCCCACCTGCCCCCGTGGAAATCGCAGGGTGACCTGACTGGCTTTGGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000460532.5 |
||
| CDS CCA 90 bp | GGCTCTATTGGTTTCAGGTCACCCTGCGATTTCCACGGGGGCAGGTaGGAGCGGGCAGAGCCTGGCGCAGAGAGGAATGCACAGGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GSIGFRSPCDFHGGR*ERAEPGAERNAQGR Trigger: TCTTCCCTGTGCATTCCTCTCTGCGCCAGGCTCTGCCCGCTCCCACCTGCCCCCGTGGAAATCGCAGGGTGACCTGAAACCAATAGAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000491908.1 |
||
| CDS CCA 90 bp | GCCAGTCCTTTCGTCCAGCAATTTCCACACCAGGCTACTTTGGAGTaGGGAGTCTTCCACAGAGATGTGGGAAGGCGCTGGGGCAGACGC | + |
|
Preference number: 5 (lower is better) Translates to: ASPFVQQFPHQATLE*GVFHRDVGRRWGRR Trigger: GCGTCTGCCCCAGCGCCTTCCCACATCTCTGTGGAAGACTCCCCACTCCAAAGTAGCCTGGTGTGGAAATTGCTGGACGAAAGGACTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485416.1 |
||
| CDS CCA 90 bp | CCAAAGCCAGTCCTTTCGTCCAGCAATTTCCACACCAGGCTACTTTaGAGTGGGGAGTCTTCCACAGAGATGTGGGAAGGCGCTGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PKPVLSSSNFHTRLL*SGESSTEMWEGAGA Trigger: TGCCCCAGCGCCTTCCCACATCTCTGTGGAAGACTCCCCACTCCAAAGTAGCCTGGTGTGGAAATTGCTGGACGAAAGGACTGGCTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485416.1 |
||
| CDS CCA 90 bp | GCTACTTTGGAGTGGGGAGTCTTCCACAGAGATGTGGGAAGGCGCTaGGGCAGACGCCTTGGGAATTTGCAAATTGGTAGTGAAGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ATLEWGVFHRDVGRR*GRRLGNLQIGSEVA Trigger: AGCCACTTCACTACCAATTTGCAAATTCCCAAGGCGTCTGCCCCAGCGCCTTCCCACATCTCTGTGGAAGACTCCCCACTCCAAAGTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485416.1 |
||
| CDS CCA 90 bp | TTCCACACCAGGCTACTTTGGAGTGGGGAGTCTTCCACAGAGATGTaGGAAGGCGCTGGGGCAGACGCCTTGGGAATTTGCAAATTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: FHTRLLWSGESSTEM*EGAGADALGICKLV Trigger: TACCAATTTGCAAATTCCCAAGGCGTCTGCCCCAGCGCCTTCCCACATCTCTGTGGAAGACTCCCCACTCCAAAGTAGCCTGGTGTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485416.1 |
||
| CDS-3UTR CAA 90 bp | AGGGTGCAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTGTCGCCATGGCTCTATaGGTTTCCGGGGCCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RVQRRLSENLPDRKCLHFVAMAL*VSGAQA Trigger: GGCCTGGGCCCCGGAAACCAATAGAGCCATGGCGAC...AAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTGCACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CAA 90 bp | AGGGTGCAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTTCATCCTCCCCCTGGTaGGCCCAATCCCAGGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RVQRRLSENLPDRKCLHFSSSPW*AQSQAC Trigger: ACAAGCCTGGGATTGGGCCAACCAGGGGGAGGATGA...AAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTGCACCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CAA 90 bp | AGGGTGCAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTGAGCCCTCGAGGATTTaGGCCAAAGGTGCCAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RVQRRLSENLPDRKCLHFEPSRI*AKGARD Trigger: ATCCCTGGCACCTTTGGCCAAAATCCTCGAGGGCTC...AAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTGCACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CAA 90 bp | AGGGTGCAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTCTTCTGGCTCAACCTTaGCATCCACTCCAGAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RVQRRLSENLPDRKCLHFLLAQP*HPLQSP Trigger: AGGGCTCTGGAGTGGATGCAAAGGTTGAGCCAGAAG...AAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTGCACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CAA 90 bp | CTTGACAGTCTGCCTTACTATGAAATTCTAGGTACAAAAATTTTCCTTAAGCTCGGCCCAATCCCAGGCTaGTCCTCCTATGAGCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LDSLPYYEILGTKIFLKLGPIPG*SSYEQA Trigger: GGCTTGCTCATAGGAGGACAAGCCTGGGATTGGGCC...GAGCTTAAGGAAAATTTTTGTACCTAGAATTTCATAGTAAGGCAGACTGTCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CAA 90 bp | AGGGTGCAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTACCAACACTGGGATCTaGGGCATCTTCTTGGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: RVQRRLSENLPDRKCLHFTNTGI*GIFLET Trigger: AGTCTCCAAGAAGATGCCCAAGATCCCAGTGTTGGT...AAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTGCACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CAA 90 bp | CAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTGATGTTTGTAGAGACGGGATGTaGCCATCTTGCCTAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QRRLSENLPDRKCLHFDVCRDGM*PSCLGW Trigger: CCAGCCTAGGCAAGATGGCAACATCCCGTCTCTACA...AACATCAAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CAA 90 bp | GAGAGATTCCCTCAACTTTATTTTCCAGACTGTATACCAAATACTTTTAGCAGTTCCCTTCAGTTTTCTTaGCTGAGATGTGTCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ERFPQLYFPDCIPNTFSSSLQFS*LRCVSS Trigger: GGAACTGACACATCTCAGCAAAGAAAACTGAAGGGA...ACTGCTAAAAGTATTTGGTATACAGTCTGGAAAATAAAGTTGAGGGAATCTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CAA 90 bp | AGGGTGCAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTGTTATTCTTTCCACATaGTCTTTGTTTCCCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RVQRRLSENLPDRKCLHFVILST*SLFPSE Trigger: CTCTGAGGGAAACAAAGACAATGTGGAAAGAATAAC...AAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTGCACCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CAA 90 bp | AGGGTGCAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTGTTTTCATCCTCATTTaGCTGGAGAATTTCCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RVQRRLSENLPDRKCLHFVFILI*LENFLK Trigger: CTTGAGGAAATTCTCCAGCAAAATGAGGATGAAAAC...AAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTGCACCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CAA 90 bp | CTTGACAGTCTGCCTTACTATGAAATTCTAGGTACAAAAATTTTCCTTAAGCTCTATCGCCACTTTCCTTaGTCCATCTCTCTCCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: LDSLPYYEILGTKIFLKLYRHFP*SISLQM Trigger: CATTTGGAGAGAGATGGACAAAGGAAAGTGGCGATA...GAGCTTAAGGAAAATTTTTGTACCTAGAATTTCATAGTAAGGCAGACTGTCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CAA 90 bp | CAAAGGAGACTTTCTGAAAATTTGCCTGACAGAAAATGTCTTCACTTTGATGTTCTTTCCACATTGTCTTaGTTTCCCTCAGAGTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QRRLSENLPDRKCLHFDVLSTLS*FPSEFV Trigger: GACAAACTCTGAGGGAAACAAAGACAATGTGGAAAG...AACATCAAAGTGAAGACATTTTCTGTCAGGCAAATTTTCAGAAAGTCTCCTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CAA 90 bp | GAGAGATTCCCTCAACTTTATTTTCCAGACTGTATACCAAATACTTTTAGCAGTTCCTTTTTGCATTTCTaGACTTCAATTTCAGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ERFPQLYFPDCIPNTFSSSFLHF*TSISVG Trigger: CCCCACTGAAATTGAAGTCAAGAAATGCAAAAAGGA...ACTGCTAAAAGTATTTGGTATACAGTCTGGAAAATAAAGTTGAGGGAATCTCTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CAA 90 bp | GAGAGATTCCCTCAACTTTATTTTCCAGACTGTATACCAAATACTTTTAGCAGTATCTGGAGACTTAGCTaGCTCTGTTCTTCAATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ERFPQLYFPDCIPNTFSSIWRLS*LCSSIL Trigger: AAGAATTGAAGAACAGAGCAAGCTAAGTCTCCAGAT...ACTGCTAAAAGTATTTGGTATACAGTCTGGAAAATAAAGTTGAGGGAATCTCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CAA 90 bp | GAGAGATTCCCTCAACTTTATTTTCCAGACTGTATACCAAATACTTTTAGCAGTACTTTGATGTTCTTCTaGACAGTCTGCCTTACTATG | + |
|
Preference number: 5 (lower is better) Translates to: ERFPQLYFPDCIPNTFSSTLMFF*TVCLTM Trigger: CATAGTAAGGCAGACTGTCAAGAAGAACATCAAAGT...ACTGCTAAAAGTATTTGGTATACAGTCTGGAAAATAAAGTTGAGGGAATCTCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS-3UTR CAA 90 bp | GAGAGATTCCCTCAACTTTATTTTCCAGACTGTATACCAAATACTTTTAGCAGTGAAAATGTCTTCACTTaGATGTTCTTCTTGACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ERFPQLYFPDCIPNTFSSENVFT*MFFLTV Trigger: GACTGTCAAGAAGAACATCAAAGTGAAGACATTTTC...ACTGCTAAAAGTATTTGGTATACAGTCTGGAAAATAAAGTTGAGGGAATCTCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS CCA 72 bp | TCCGGGGCCCAGGCCTCGGTCACCGCGGGCCTCTCCTaGTCCAGAGTCTACGCTGAACCCCACTCACTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SGAQASVTAGLS*SRVYAEPHSLF Trigger: AAACAGTGAGTGGGGTTCAGCGTAGACTCTGGACCAGGAGAGGCCCGCGGTGACCGAGGCCTGGGCCCCGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479870.6 |
||
| CDS CAA 90 bp | GGAAGAGGCTTCCCTGTACCAGTGACTGGGCGACCGAGCCGGGATTaGGGAGCGGGGAGGAGGCTGGAGCTGGAGGAGAGGAGGGGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: GRGFPVPVTGRPSRD*GAGRRLELEERRGF Trigger: GAAACCCCTCCTCTCCTCCAGCTCCAGCCTCCTCCCCGCTCCCAAATCCCGGCTCGGTCGCCCAGTCACTGGTACAGGGAAGCCTCTTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491908.1 |
||
| CDS CCA 72 bp | GAATGCACAGGGAAGAGGCTTCCCTGTACCAGTGACTaGGCGACCGAGCCGGGATTTGGGAGCGGGGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ECTGKRLPCTSD*ATEPGFGSGEE Trigger: CTCCTCCCCGCTCCCAAATCCCGGCTCGGTCGCCCAGTCACTGGTACAGGGAAGCCTCTTCCCTGTGCATTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000460532.5 ENST00000491908.1 |
||
| CDS TCA 72 bp | AGAGGAATGCACAGGGAAGAGGCTTCCCTGTACCAGTaGCTGGGCGACCGAGCCGGGATTTGGGAGCGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: RGMHREEASLYQ*LGDRAGIWERG Trigger: TCCCCGCTCCCAAATCCCGGCTCGGTCGCCCAGTCACTGGTACAGGGAAGCCTCTTCCCTGTGCATTCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000460532.5 ENST00000491908.1 |
||
| CDS CAA 72 bp | AGGAGGCAAAGGGCAGCGGGCTCGAAACTACAGGACTaGGAAAGTCTTAGGCGGAGACTGCGGGGGTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RRQRAAGSKLQD*ESLRRRLRGWG Trigger: CCCCCACCCCCGCAGTCTCCGCCTAAGACTTTCCAAGTCCTGTAGTTTCGAGCCCGCTGCCCTTTGCCTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478172.1 |
||
| CDS CAA 72 bp | GAAGGCGCTGGGGCAGACGCCTTGGGAATTTGCAAATaGGTAGTGAAGTGGCTAGGAGGAGGCGTGTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: EGAGADALGICK*VVKWLGGGVWG Trigger: CCCCCACACGCCTCCTCCTAGCCACTTCACTACCAATTTGCAAATTCCCAAGGCGTCTGCCCCAGCGCCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485416.1 |
||
| CDS CAA 90 bp | CCCAAAGCCAGTCCTTTCGTCCAGCAATTTCCACACCAGGCTACTTaGGAGTGGGGAGTCTTCCACAGAGATGTGGGAAGGCGCTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PKASPFVQQFPHQAT*EWGVFHRDVGRRWG Trigger: GCCCCAGCGCCTTCCCACATCTCTGTGGAAGACTCCCCACTCCAAAGTAGCCTGGTGTGGAAATTGCTGGACGAAAGGACTGGCTTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485416.1 |
||
| CDS CCA 72 bp | AGGCTACTTTGGAGTGGGGAGTCTTCCACAGAGATGTaGGAAGGCGCTGGGGCAGACGCCTTGGGAATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RLLWSGESSTEM*EGAGADALGIC Trigger: GCAAATTCCCAAGGCGTCTGCCCCAGCGCCTTCCCACATCTCTGTGGAAGACTCCCCACTCCAAAGTAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485416.1 |
||
| CDS GCA 72 bp | ATGTGGGAAGGCGCTGGGGCAGACGCCTTGGGAATTTaGAAATTGGTAGTGAAGTGGCTAGGAGGAGGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: MWEGAGADALGI*KLVVKWLGGGV Trigger: CACGCCTCCTCCTAGCCACTTCACTACCAATTTGCAAATTCCCAAGGCGTCTGCCCCAGCGCCTTCCCACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485416.1 |
||
| CDS CAA 72 bp | GATGTGGGAAGGCGCTGGGGCAGACGCCTTGGGAATTaGCAAATTGGTAGTGAAGTGGCTAGGAGGAGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: DVGRRWGRRLGN*QIGSEVARRRR Trigger: ACGCCTCCTCCTAGCCACTTCACTACCAATTTGCAAATTCCCAAGGCGTCTGCCCCAGCGCCTTCCCACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485416.1 |
||
| CDS CCA 72 bp | GAGTGGGGAGTCTTCCACAGAGATGTGGGAAGGCGCTaGGGCAGACGCCTTGGGAATTTGCAAATTGGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: EWGVFHRDVGRR*GRRLGNLQIGS Trigger: ACTACCAATTTGCAAATTCCCAAGGCGTCTGCCCCAGCGCCTTCCCACATCTCTGTGGAAGACTCCCCACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485416.1 |
||
| CDS CCA 72 bp | TTCGTCCAGCAATTTCCACACCAGGCTACTTTGGAGTaGGGAGTCTTCCACAGAGATGTGGGAAGGCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FVQQFPHQATLE*GVFHRDVGRRW Trigger: CCAGCGCCTTCCCACATCTCTGTGGAAGACTCCCCACTCCAAAGTAGCCTGGTGTGGAAATTGCTGGACGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485416.1 |
||
| CDS CAA 90 bp | GAACAGAACCCTTTCATCCTCCCCCTGGTTGGCCCAATCCCAGGCTaGTCCTCCTATGAGCAAGCCGCCACCACATTTCATGAACTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: EQNPFILPLVGPIPG*SSYEQAATTFHELD Trigger: GTCAAGTTCATGAAATGTGGTGGCGGCTTGCTCATAGGAGGACAAGCCTGGGATTGGGCCAACCAGGGGGAGGATGAAAGGGTTCTGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000355951.2 ENST00000479870.6 |
||
| CDS CAA 72 bp | TCAACCTTTGCATCCACTCCAGAGCCCTCGAGGATTTaGGCCAAAGGTGCCAGGGATGGGTGTACACCAATG | + |
|
Preference number: 6 (lower is better) Translates to: STFASTPEPSRI*AKGARDGCTPM Trigger: CATTGGTGTACACCCATCCCTGGCACCTTTGGCCAAAATCCTCGAGGGCTCTGGAGTGGATGCAAAGGTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000355951.2 ENST00000460532.5 ENST00000478172.1 ENST00000479870.6 ENST00000491908.1 |
||
| CDS CAA 72 bp | TCCACAGAGATGTGGGAAGGCGCTGGGGCAGACGCCTaGGGAATTTGCAAATTGGTAGTGAAGTGGCTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: STEMWEGAGADA*GICKLVVKWLG Trigger: TCCTAGCCACTTCACTACCAATTTGCAAATTCCCAAGGCGTCTGCCCCAGCGCCTTCCCACATCTCTGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485416.1 |
||
| CDS CCA 72 bp | ATCAATACAGTAAACCCCCAGGGAGTCTTTCACTTCTaGCTCAACCTTTGCATCCACTCCAGAGCCCTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: INTVNPQGVFHF*LNLCIHSRALE Trigger: CTCGAGGGCTCTGGAGTGGATGCAAAGGTTGAGCCAGAAGTGAAAGACTCCCTGGGGGTTTACTGTATTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000355951.2 ENST00000460532.5 ENST00000478172.1 ENST00000479870.6 ENST00000491908.1 |
||