RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBX6 (Homo sapiens)

Ensembl gene IDs: ENSG00000149922

Ensembl transcript IDs: ENST00000279386.6, ENST00000395224.7, ENST00000553607.1, ENST00000567664.5, ENST00000627355.2

Found 318 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGGGGCCTGTTCTGGATCTGATTCACGAATGTCTCCACCCAGGGTaGAGTCGCAGGGACCACCTGGTGTGTCACTGCATTTCTGATGTC +
Preference number: 1 (lower is better)
Translates to: LGPVLDLIHECLHPG*SRRDHLVCHCISDV
Trigger: GACATCAGAAATGCAGTGACACACCAGGTGGTCCCTGCGACTCCACCCTGGGTGGAGACATTCGTGAATCAGATCCAGAACAGGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567664.5
3UTR-3UTR CCA 90 bp GCGGGGCAAAGGGTACCGCCGGTGGAGCCGCTGGGTACCCGGAGCCCCCTGACCCCCAAGGCGGCCATTTaGTGTGGGGGATGGGGCCGG +
Preference number: 2 (lower is better)
Translates to: AGQRVPPVEPLGTRSPLTPKAAI*CGGWGR
Trigger: CCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGG...GGTCAGGGGGCTCCGGGTACCCAGCGGCTCCACCGGCGGTACCCTTTGCCCCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000567664.5
3UTR-3UTR GCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGGCCACCACACAGAGGTaGCGGGGCAGCGGTGGCTTC +
Preference number: 2 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGATTQR*RGSGGF
Trigger: GAAGCCACCGCTGCCCCGGCACCTCTGTGTGGTGGC...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000567664.5
3UTR-3UTR CCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGCCCCTCCAGAGCCCATaGGGAGGCCTGGTAAGTGGG +
Preference number: 2 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGPLQSP*GGLVSG
Trigger: CCCACTTACCAGGCCTCCCCATGGGCTCTGGAGGGG...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
3UTR-3UTR CCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGGAGCCTCCGGGAAGCTaGGGCTCCTGGTGGGAAGGT +
Preference number: 2 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGEPPGS*GSWWEG
Trigger: ACCTTCCCACCAGGAGCCCCAGCTTCCCGGAGGCTC...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000567664.5
3UTR-3UTR TCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGCCATTCACACGGAGGTaGGAGCCGGGAAGGGGAAGC +
Preference number: 2 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRPFTRR*EPGRGS
Trigger: GCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGG...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
3UTR-3UTR CCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGGTCTGTGGCCCCATTTaGCCAGGCAGAGCCCCTTCC +
Preference number: 2 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGVCGPI*PGRAPS
Trigger: GGAAGGGGCTCTGCCTGGCCAAATGGGGCCACAGAC...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
3UTR-3UTR CCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGGGATGCTGGTCTGTaGCCCCATTTGGCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRGDAGL*PHLARQ
Trigger: CTGCCTGGCCAAATGGGGCCACAGACCAGCATCCCC...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
3UTR-3UTR CCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGGGGAGGCCTGGTAAGTaGGGATGCTGGTCTGTGGCC +
Preference number: 2 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGGRPGK*GCWSVA
Trigger: GGCCACAGACCAGCATCCCCACTTACCAGGCCTCCC...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
69% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
3UTR-3UTR CCA 90 bp AGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGCCGGCGGCGGCCATTTGGTGTaGGGGATGGGGCCGGTGGAG +
Preference number: 2 (lower is better)
Translates to: RQSPFHSHGGESREGEAGGGHLV*GMGPVE
Trigger: CTCCACCGGCCCCATCCCCCACACCAAATGGCCGCC...GCCGGCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
3UTR-3UTR CCA 90 bp TGGCCAGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGGGCGGCCATTTGGTGTaGGGGATGGGGCCGGTGGAG +
Preference number: 2 (lower is better)
Translates to: WPGRAPSIHTEVRAGKGKGGHLV*GMGPVE
Trigger: CTCCACCGGCCCCATCCCCCACACCAAATGGCCGCC...CTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCTGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
3UTR-3UTR CCA 90 bp AGCCGGCCCCAGCTGGACTCCCAGCAGCCTTGGTTAGGCTTTGAAGCCAGAGGGCCCAAGGCGGCCATTTaGTGTGGGGGATGGGGCCGG +
Preference number: 2 (lower is better)
Translates to: SRPQLDSQQPWLGFEARGPKAAI*CGGWGR
Trigger: CCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGG...CCCTCTGGCTTCAAAGCCTAACCAAGGCTGCTGGGAGTCCAGCTGGGGCCGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
3UTR-3UTR CCA 90 bp GCGGCAGCTCCAGAAATGCAGCCGAGTAGGGGGCTGAGCGCCCGGAGTCTGGAGGGTAGGCCTCAGCACTaGGGCCACCACACAGAGGTG +
Preference number: 2 (lower is better)
Translates to: AAAPEMQPSRGLSARSLEGRPQH*GHHTEV
Trigger: CACCTCTGTGTGGTGGCCCCAGTGCTGAGGCCTACC...CTCCAGACTCCGGGCGCTCAGCCCCCTACTCGGCTGCATTTCTGGAGCTGCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567664.5
3UTR-3UTR TCA 90 bp AGCCGGCCCCAGCTGGACTCCCAGCAGCCTTGGTTAGGCTTTGAAGCCAGAGGGGGAGCGGGAGGTTTGTaGTGGAGGCAGAGGGGCCCA +
Preference number: 2 (lower is better)
Translates to: SRPQLDSQQPWLGFEARGGAGGL*WRQRGP
Trigger: TGGGCCCCTCTGCCTCCATCACAAACCTCCCGCTCC...CCCTCTGGCTTCAAAGCCTAACCAAGGCTGCTGGGAGTCCAGCTGGGGCCGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
3UTR-3UTR TCA 90 bp AAAGTGCGGGGCAAAGGGTACCGCCGGTGGAGCCGCTGGGTACCCGGAGCCCCCGTGTCACTGCATTTCTaGTGTCCAGCACGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: KVRGKGYRRWSRWVPGAPVSLHF*CPARCL
Trigger: CAGGCACCGTGCTGGACATCAGAAATGCAGTGACAC...GGGGGCTCCGGGTACCCAGCGGCTCCACCGGCGGTACCCTTTGCCCCGCACTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567664.5
3UTR-3UTR CCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGCCCAGAACAACAGACTaGTGTGGCCTGCACCAGTGT +
Preference number: 2 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGPRTTD*CGLHQC
Trigger: ACACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGG...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
3UTR-3UTR CCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGTCGCAGGGACCACCTaGTGTGTCACTGCATTTCTG +
Preference number: 2 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRVAGTT*CVTAFL
Trigger: CAGAAATGCAGTGACACACCAGGTGGTCCCTGCGAC...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567664.5
3UTR-3UTR CCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGGACTCCCAGCAGCCTTaGTTAGGCTTTGAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGDSQQP*LGFEAR
Trigger: TCTGGCTTCAAAGCCTAACCAAGGCTGCTGGGAGTC...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
3UTR-3UTR TCA 90 bp GGTGGAGCCGCTGGGTACCCGGAGCCCCCTGACCCGTGCGGCAGCTCCAGAAATGGCCTGTTCTGGATCTaGTTCACGAATGTCTCCACC +
Preference number: 2 (lower is better)
Translates to: GGAAGYPEPPDPCGSSRNGLFWI*FTNVST
Trigger: GGTGGAGACATTCGTGAATCAGATCCAGAACAGGCC...ATTTCTGGAGCTGCCGCACGGGTCAGGGGGCTCCGGGTACCCAGCGGCTCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567664.5
3UTR-3UTR GCA 90 bp AGAAAGTGCGGGGCAAAGGGTACCGCCGGTGGAGCCGCTGGGTACCCGGAGCCCCACCTGGTGTGTCACTaGATTTCTGATGTCCAGCAC +
Preference number: 2 (lower is better)
Translates to: RKCGAKGTAGGAAGYPEPHLVCH*ISDVQH
Trigger: GTGCTGGACATCAGAAATGCAGTGACACACCAGGTG...GGGCTCCGGGTACCCAGCGGCTCCACCGGCGGTACCCTTTGCCCCGCACTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567664.5
3UTR-3UTR CCA 90 bp AGTACATGGGTTTGGAGCCCACATCCAGATAGCCCCCAGGCGCGGTGTATGGTAAGCTGGGGCTCCTGGTaGGAAGGTGACTGGGGGCCC +
Preference number: 2 (lower is better)
Translates to: STWVWSPHPDSPQARCMVSWGSW*EGDWGP
Trigger: GGGCCCCCAGTCACCTTCCCACCAGGAGCCCCAGCT...TACCATACACCGCGCCTGGGGGCTATCTGGATGTGGGCTCCAAACCCATGTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000567664.5
3UTR-3UTR CCA 90 bp CAGCAGTGGTTCAGTACATGGGTTTGGAGCCCACATCCAGATAGCCCCCAGGCGAAAGGGTACCGCCGGTaGAGCCGCTGGGTACCCGGA +
Preference number: 2 (lower is better)
Translates to: QQWFSTWVWSPHPDSPQAKGYRR*SRWVPG
Trigger: TCCGGGTACCCAGCGGCTCCACCGGCGGTACCCTTT...CGCCTGGGGGCTATCTGGATGTGGGCTCCAAACCCATGTACTGAACCACTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567664.5
3UTR-3UTR CCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGTTAACAAAAATACTCTaGTCCCAGAACAACAGACTG +
Preference number: 2 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRLTKIL*SQNNRL
Trigger: CAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAA...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
3UTR-3UTR CCA 90 bp ATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTGGCGGCCATTTGGTGTaGGGGATGGGGCCGGTGGAG +
Preference number: 2 (lower is better)
Translates to: INKNTLVPEQQTGVACTSGGHLV*GMGPVE
Trigger: CTCCACCGGCCCCATCCCCCACACCAAATGGCCGCC...ACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
3UTR-3UTR TCA 90 bp ATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTGGAGCGGGAGGTTTGTaGTGGAGGCAGAGGGGCCCA +
Preference number: 2 (lower is better)
Translates to: INKNTLVPEQQTGVACTSGAGGL*WRQRGP
Trigger: TGGGCCCCTCTGCCTCCATCACAAACCTCCCGCTCC...ACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
3UTR-3UTR TCA 90 bp ATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTCCATTCACACGGAGGTaGGAGCCGGGAAGGGGAAGC +
Preference number: 2 (lower is better)
Translates to: INKNTLVPEQQTGVACTSPFTRR*EPGRGS
Trigger: GCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGG...ACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
3UTR-3UTR CCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGGGGATGCTGGTCTGTaGCCCCATTTGGCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPGDAGL*PHLARQ
Trigger: CTGCCTGGCCAAATGGGGCCACAGACCAGCATCCCC...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
3UTR-3UTR CCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGGTAAGTGGGGATGCTaGTCTGTGGCCCCATTTGGC +
Preference number: 2 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPGKWGC*SVAPFG
Trigger: GCCAAATGGGGCCACAGACCAGCATCCCCACTTACC...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
3UTR-3UTR CCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGACTCCCAGCAGCCTTaGTTAGGCTTTGAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPDSQQP*LGFEAR
Trigger: TCTGGCTTCAAAGCCTAACCAAGGCTGCTGGGAGTC...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
3UTR-3UTR CCA 90 bp ACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTTGTTTTATGCCTGGAACTGTCCCTaGCACATAGCAGGTACTATA +
Preference number: 2 (lower is better)
Translates to: TRNQLHEGRGFGLLCLFYAWNCP*HIAGTI
Trigger: TATAGTACCTGCTATGTGCCAGGGACAGTTCCAGGC...ATAAAACAAACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
3UTR-3UTR GCA 90 bp ATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATGAGGGCGTTTTCACTTACCACTaGATTTCTGATGTCCAGCAC +
Preference number: 2 (lower is better)
Translates to: ISLVCLSTLPTRNQLHEGVFTYH*ISDVQH
Trigger: GTGCTGGACATCAGAAATGCAGTGGTAAGTGAAAAC...GCCCTCATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
3UTR-3UTR TCA 90 bp TTATTTATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATTTACCACTGCATTTCTaGTGTCCAGCACGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: LFISLVCLSTLPTRNQLHLPLHF*CPARCL
Trigger: CAGGCACCGTGCTGGACATCAGAAATGCAGTGGTAA...ATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAATAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553607.1
3UTR TCA 72 bp GTGCGGCAGCTCCAGAAATGCAGCCGAGTAGGGGGCTaGGCGCCCGGAGTCTGGAGCCTCCGGGAAGCTGGG +
Preference number: 3 (lower is better)
Translates to: VRQLQKCSRVGG*APGVWSLREAG
Trigger: CCCAGCTTCCCGGAGGCTCCAGACTCCGGGCGCTCAGCCCCCTACTCGGCTGCATTTCTGGAGCTGCCGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567664.5
3UTR TCA 72 bp TACCGCCGGTGGAGCCGCTGGGTACCCGGAGCCCCCTaGCCCGTGCGGCAGCTCCAGAAATGCAGCCGAGTA +
Preference number: 3 (lower is better)
Translates to: YRRWSRWVPGAP*PVRQLQKCSRV
Trigger: TACTCGGCTGCATTTCTGGAGCTGCCGCACGGGTCAGGGGGCTCCGGGTACCCAGCGGCTCCACCGGCGGTA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567664.5
3UTR CCA 72 bp AATGTCTCCACCCAGGGTGGAGTCGCAGGGACCACCTaGTGTGTCACTGCATTTCTGATGTCCAGCACGGTG +
Preference number: 3 (lower is better)
Translates to: NVSTQGGVAGTT*CVTAFLMSSTV
Trigger: CACCGTGCTGGACATCAGAAATGCAGTGACACACCAGGTGGTCCCTGCGACTCCACCCTGGGTGGAGACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567664.5
3UTR CCA 72 bp GTTCTGGATCTGATTCACGAATGTCTCCACCCAGGGTaGAGTCGCAGGGACCACCTGGTGTGTCACTGCATT +
Preference number: 3 (lower is better)
Translates to: VLDLIHECLHPG*SRRDHLVCHCI
Trigger: AATGCAGTGACACACCAGGTGGTCCCTGCGACTCCACCCTGGGTGGAGACATTCGTGAATCAGATCCAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567664.5
3UTR GCA 72 bp TTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTaGATGAGGGCCGGGGCTTTGGTTTGCTTTGTTTGT +
Preference number: 3 (lower is better)
Translates to: LSACLLSPLEIS*MRAGALVCFVC
Trigger: ACAAACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
3UTR-3UTR CAA 90 bp ATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATGAGGGCTTTGGTTTGCTTTGTTaGTTTTATCTCCAGTGCCTG +
Preference number: 3 (lower is better)
Translates to: ISLVCLSTLPTRNQLHEGFGLLC*FYLQCL
Trigger: CAGGCACTGGAGATAAAACAAACAAAGCAAACCAAA...GCCCTCATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR TCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGTACCCGGAGCCCCCTaGCCCGTGCGGCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRVPGAP*PVRQLQ
Trigger: CTGGAGCTGCCGCACGGGTCAGGGGGCTCCGGGTAC...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CCA 90 bp AAAGTGCGGGGCAAAGGGTACCGCCGGTGGAGCCGCTGGGTACCCGGAGCCCCCGCTCTGCCTTGCCGCTaGGCTCCCAGCGCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: KVRGKGYRRWSRWVPGAPALPCR*APSAGP
Trigger: AGGGCCGGCGCTGGGAGCCCAGCGGCAAGGCAGAGC...GGGGGCTCCGGGTACCCAGCGGCTCCACCGGCGGTACCCTTTGCCCCGCACTTT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR TCA 90 bp GTGGGTGGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGAGGGCCTCTGGAGCTaGTGGGGCCGGCTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: VGGQAQGGHLVWGMGPVEEGLWS*WGRLSA
Trigger: GGCACTGAGCCGGCCCCATCAGCTCCAGAGGCCCTC...CTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCCACCCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR TCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGAGCCGAGTAGGGGGCTaGGCGCCCGGAGTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRSRVGG*APGVWS
Trigger: GCTCCAGACTCCGGGCGCTCAGCCCCCTACTCGGCT...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR TCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGAGCCGAGTAGGGGGCTaGGCGCCCGGAGTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGSRVGG*APGVWS
Trigger: GCTCCAGACTCCGGGCGCTCAGCCCCCTACTCGGCT...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR GCA 90 bp AAAGTGCGGGGCAAAGGGTACCGCCGGTGGAGCCGCTGGGTACCCGGAGCCCCCAGGCAGGCGGGGCTCTaGCTTGCCGCTGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: KVRGKGYRRWSRWVPGAPRQAGL*LAAGLP
Trigger: TGGGAGCCCAGCGGCAAGGCAGAGCCCCGCCTGCCT...GGGGGCTCCGGGTACCCAGCGGCTCCACCGGCGGTACCCTTTGCCCCGCACTTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR CCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGGGGCGGGTGGGAAGCTaGAGTCGGCCCCAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGGRVGS*SRPQVG
Trigger: CCCAACCTGGGGCCGACTCCAGCTTCCCACCCGCCC...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
72% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGGCGGGTGGGAAGCTaGAGTCGGCCCCAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRGRVGS*SRPQVG
Trigger: CCCAACCTGGGGCCGACTCCAGCTTCCCACCCGCCC...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGCAGAAGGGGCAGAGGTaGGTGCGCGGCCAGGGTGCG +
Preference number: 4 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGQKGQR*VRGQGA
Trigger: CGCACCCTGGCCGCGCACCCACCTCTGCCCCTTCTG...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR TCA 90 bp GGTGGAGCCGCTGGGTACCCGGAGCCCCCTGACCCGTGCGGCAGCTCCAGAAATGAGGGCCTCTGGAGCTaGTGGGGCCGGCTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GGAAGYPEPPDPCGSSRNEGLWS*WGRLSA
Trigger: GGCACTGAGCCGGCCCCATCAGCTCCAGAGGCCCTC...ATTTCTGGAGCTGCCGCACGGGTCAGGGGGCTCCGGGTACCCAGCGGCTCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR TCA 90 bp GTGGGTGGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGCGGGGTCCAGGCCAGTaGCTGACACTCGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VGGQAQGGHLVWGMGPVERGPGQ*LTLGRQ
Trigger: CTGCCTGCCGAGTGTCAGTCACTGGCCTGGACCCCG...CTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCCACCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR TCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGCGGGGTCCAGGCCAGTaGCTGACACTCGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGRGPGQ*LTLGRQ
Trigger: CTGCCTGCCGAGTGTCAGTCACTGGCCTGGACCCCG...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR GCA 90 bp GTGGGTGGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGGCCTCAGGTCTCGCTaGTTAGGGCCCCCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: VGGQAQGGHLVWGMGPVEGLRSR*LGPPVL
Trigger: CAGCACCGGGGGCCCTAAGCAGCGAGACCTGAGGCC...CTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCCACCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000279386.6
ENST00000627355.2
CDS-3UTR GCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGCCTCAGGTCTCGCTaGTTAGGGCCCCCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRGLRSR*LGPPVL
Trigger: CAGCACCGGGGGCCCTAAGCAGCGAGACCTGAGGCC...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000279386.6
ENST00000627355.2
CDS-3UTR CCA 90 bp GCGGGGCAAAGGGTACCGCCGGTGGAGCCGCTGGGTACCCGGAGCCCCCTGACCTGTCTCCACCCAGGGTaGAGTCGCAGGGACCACCTG +
Preference number: 4 (lower is better)
Translates to: AGQRVPPVEPLGTRSPLTCLHPG*SRRDHL
Trigger: CAGGTGGTCCCTGCGACTCCACCCTGGGTGGAGACA...GGTCAGGGGGCTCCGGGTACCCAGCGGCTCCACCGGCGGTACCCTTTGCCCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR CCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGAGCTGGGGCTCCTGGTaGGAAGGTGACTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGSWGSW*EGDWGP
Trigger: GGGCCCCCAGTCACCTTCCCACCAGGAGCCCCAGCT...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGCCCAAGGCGGCCATTTaGTGTGGGGGATGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGPKAAI*CGGWGR
Trigger: CCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGG...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGCCCAAGGCGGCCATTTaGTGTGGGGGATGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRPKAAI*CGGWGR
Trigger: CCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGG...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR TCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGTCTCCAGGCTCAGGCTaGCCCCCGGGAGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRSPGSG*PPGGNG
Trigger: TCCATTCCCTCCCGGGGGTCAGCCTGAGCCTGGAGA...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR TCA 90 bp AGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGCCGGCGTACCCGGAGCCCCCTaGCCCGTGCGGCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RQSPFHSHGGESREGEAGVPGAP*PVRQLQ
Trigger: CTGGAGCTGCCGCACGGGTCAGGGGGCTCCGGGTAC...GCCGGCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR TCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGAGCGGGAGGTTTGTaGTGGAGGCAGAGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRGAGGL*WRQRGP
Trigger: TGGGCCCCTCTGCCTCCATCACAAACCTCCCGCTCC...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR TCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGGGAGCGGGAGGTTTGTaGTGGAGGCAGAGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGGAGGL*WRQRGP
Trigger: TGGGCCCCTCTGCCTCCATCACAAACCTCCCGCTCC...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR TCA 90 bp GTGGGTGGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGGAGCGGGAGGTTTGTaGTGGAGGCAGAGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: VGGQAQGGHLVWGMGPVEGAGGL*WRQRGP
Trigger: TGGGCCCCTCTGCCTCCATCACAAACCTCCCGCTCC...CTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCCACCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR GCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGATGGGGCCGGCTCAGTaGCCATGGCAGGGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGMGPAQ*PWQGAE
Trigger: TTCTGCCCCCTGCCATGGGCACTGAGCCGGCCCCAT...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGAGTGCAGGATCAGGTaGCCGTGGGGGTCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRECRIR*PWGSSV
Trigger: CACGCTGGACCCCCACGGCCACCTGATCCTGCACTC...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGGGCCTCTGTGGCTGCTaGCTCTGGGCCCCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGGLCGC*LWAPQF
Trigger: AAACTGCGGGGCCCAGAGCCAGCAGCCACAGAGGCC...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp GTGGGTGGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGGCCTCTGTGGCTGCTaGCTCTGGGCCCCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: VGGQAQGGHLVWGMGPVEGLCGC*LWAPQF
Trigger: AAACTGCGGGGCCCAGAGCCAGCAGCCACAGAGGCC...CTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCCACCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGGGAAGCTGGGGCTCCTaGTGGGAAGGTGACTGGGGG +
Preference number: 4 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGGSWGS*WEGDWG
Trigger: CCCCCAGTCACCTTCCCACCAGGAGCCCCAGCTTCC...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGAAGCTGGGGCTCCTaGTGGGAAGGTGACTGGGGG +
Preference number: 4 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRGSWGS*WEGDWG
Trigger: CCCCCAGTCACCTTCCCACCAGGAGCCCCAGCTTCC...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGAGCCTCCGGGAAGCTaGGGCTCCTGGTGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVREPPGS*GSWWEG
Trigger: ACCTTCCCACCAGGAGCCCCAGCTTCCCGGAGGCTC...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CCA 90 bp AAAGTGCGGGGCAAAGGGTACCGCCGGTGGAGCCGCTGGGTACCCGGAGCCCCCAAAGGGTACCGCCGGTaGAGCCGCTGGGTACCCGGA +
Preference number: 4 (lower is better)
Translates to: KVRGKGYRRWSRWVPGAPKGYRR*SRWVPG
Trigger: TCCGGGTACCCAGCGGCTCCACCGGCGGTACCCTTT...GGGGGCTCCGGGTACCCAGCGGCTCCACCGGCGGTACCCTTTGCCCCGCACTTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR CCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGAAAGGGTACCGCCGGTaGAGCCGCTGGGTACCCGGA +
Preference number: 4 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGKGYRR*SRWVPG
Trigger: TCCGGGTACCCAGCGGCTCCACCGGCGGTACCCTTT...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CCA 90 bp GGTGGAGCCGCTGGGTACCCGGAGCCCCCTGACCCGTGCGGCAGCTCCAGAAATCCCAAGGCGGCCATTTaGTGTGGGGGATGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: GGAAGYPEPPDPCGSSRNPKAAI*CGGWGR
Trigger: CCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGG...ATTTCTGGAGCTGCCGCACGGGTCAGGGGGCTCCGGGTACCCAGCGGCTCCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR TCA 90 bp GCGGCAGCTCCAGAAATGCAGCCGAGTAGGGGGCTGAGCGCCCGGAGTCTGGAGCGGGGTCCAGGCCAGTaGCTGACACTCGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: AAAPEMQPSRGLSARSLERGPGQ*LTLGRQ
Trigger: CTGCCTGCCGAGTGTCAGTCACTGGCCTGGACCCCG...CTCCAGACTCCGGGCGCTCAGCCCCCTACTCGGCTGCATTTCTGGAGCTGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR TCA 90 bp GTGGGTGGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGCCATTCACACGGAGGTaGGAGCCGGGAAGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: VGGQAQGGHLVWGMGPVEPFTRR*EPGRGS
Trigger: GCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGG...CTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCCACCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR TCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGCCATTCACACGGAGGTaGGAGCCGGGAAGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGPFTRR*EPGRGS
Trigger: GCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGG...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR GCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGGAGCCCCCTGACCCGTaGGGCAGCTCCAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGEPPDP*GSSRNA
Trigger: TGCATTTCTGGAGCTGCCGCACGGGTCAGGGGGCTC...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR GCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGAGCCCCCTGACCCGTaGGGCAGCTCCAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVREPPDP*GSSRNA
Trigger: TGCATTTCTGGAGCTGCCGCACGGGTCAGGGGGCTC...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR GCA 90 bp GTGGGTGGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGCCCCCTTGGAGAAAGTaGGGGGCAAAGGGTACCGCC +
Preference number: 4 (lower is better)
Translates to: VGGQAQGGHLVWGMGPVEPPWRK*GAKGTA
Trigger: GGCGGTACCCTTTGCCCCGCACTTTCTCCAAGGGGG...CTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCCACCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGACCCCCGGGAGGGAATaGAGGGCCTCTGGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGTPGRE*RASGAD
Trigger: ATCAGCTCCAGAGGCCCTCCATTCCCTCCCGGGGGT...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGACCCCCGGGAGGGAATaGAGGGCCTCTGGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRTPGRE*RASGAD
Trigger: ATCAGCTCCAGAGGCCCTCCATTCCCTCCCGGGGGT...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CCA 90 bp TGGCCAGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGGCTCTGCCTTGCCGCTaGGCTCCCAGCGCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: WPGRAPSIHTEVRAGKGKALPCR*APSAGP
Trigger: AGGGCCGGCGCTGGGAGCCCAGCGGCAAGGCAGAGC...CTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCTGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGAGGATCAGGTGGCCGTaGGGGTCCAGCGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGRIRWP*GSSVLL
Trigger: CAACAGCACGCTGGACCCCCACGGCCACCTGATCCT...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGTGTCTCCACCCAGGGTaGAGTCGCAGGGACCACCTG +
Preference number: 4 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRCLHPG*SRRDHL
Trigger: CAGGTGGTCCCTGCGACTCCACCCTGGGTGGAGACA...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGTGTCTCCACCCAGGGTaGAGTCGCAGGGACCACCTG +
Preference number: 4 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGCLHPG*SRRDHL
Trigger: CAGGTGGTCCCTGCGACTCCACCCTGGGTGGAGACA...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CCA 90 bp GCGGCAGCTCCAGAAATGCAGCCGAGTAGGGGGCTGAGCGCCCGGAGTCTGGAGAGCTGGGGCTCCTGGTaGGAAGGTGACTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: AAAPEMQPSRGLSARSLESWGSW*EGDWGP
Trigger: GGGCCCCCAGTCACCTTCCCACCAGGAGCCCCAGCT...CTCCAGACTCCGGGCGCTCAGCCCCCTACTCGGCTGCATTTCTGGAGCTGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR CCA 90 bp GTGGGTGGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGGGGATGCTGGTCTGTaGCCCCATTTGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VGGQAQGGHLVWGMGPVEGDAGL*PHLARQ
Trigger: CTGCCTGGCCAAATGGGGCCACAGACCAGCATCCCC...CTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCCACCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp GTGGGTGGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGGGAGGCCTGGTAAGTaGGGATGCTGGTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: VGGQAQGGHLVWGMGPVEGRPGK*GCWSVA
Trigger: GGCCACAGACCAGCATCCCCACTTACCAGGCCTCCC...CTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCCACCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR TCA 90 bp AGCCGGCCCCAGCTGGACTCCCAGCAGCCTTGGTTAGGCTTTGAAGCCAGAGGGGAGGGCCTCTGGAGCTaGTGGGGCCGGCTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: SRPQLDSQQPWLGFEARGEGLWS*WGRLSA
Trigger: GGCACTGAGCCGGCCCCATCAGCTCCAGAGGCCCTC...CCCTCTGGCTTCAAAGCCTAACCAAGGCTGCTGGGAGTCCAGCTGGGGCCGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR TCA 90 bp AGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGCCGGCCGGGGTCCAGGCCAGTaGCTGACACTCGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RQSPFHSHGGESREGEAGRGPGQ*LTLGRQ
Trigger: CTGCCTGCCGAGTGTCAGTCACTGGCCTGGACCCCG...GCCGGCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR GCA 90 bp AGCCGGCCCCAGCTGGACTCCCAGCAGCCTTGGTTAGGCTTTGAAGCCAGAGGGAGGCAGGCGGGGCTCTaGCTTGCCGCTGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SRPQLDSQQPWLGFEARGRQAGL*LAAGLP
Trigger: TGGGAGCCCAGCGGCAAGGCAGAGCCCCGCCTGCCT...CCCTCTGGCTTCAAAGCCTAACCAAGGCTGCTGGGAGTCCAGCTGGGGCCGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR GCA 90 bp TGGCCAGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGAGGCAGGCGGGGCTCTaGCTTGCCGCTGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: WPGRAPSIHTEVRAGKGKRQAGL*LAAGLP
Trigger: TGGGAGCCCAGCGGCAAGGCAGAGCCCCGCCTGCCT...CTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCTGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR GCA 90 bp AGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGCCGGCGCCACCACACAGAGGTaGCGGGGCAGCGGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: RQSPFHSHGGESREGEAGATTQR*RGSGGF
Trigger: GAAGCCACCGCTGCCCCGGCACCTCTGTGTGGTGGC...GCCGGCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp AGCCGGCCCCAGCTGGACTCCCAGCAGCCTTGGTTAGGCTTTGAAGCCAGAGGGGGGCGGGTGGGAAGCTaGAGTCGGCCCCAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: SRPQLDSQQPWLGFEARGGRVGS*SRPQVG
Trigger: CCCAACCTGGGGCCGACTCCAGCTTCCCACCCGCCC...CCCTCTGGCTTCAAAGCCTAACCAAGGCTGCTGGGAGTCCAGCTGGGGCCGGCT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp AGAAAGTGCGGGGCAAAGGGTACCGCCGGTGGAGCCGCTGGGTACCCGGAGCCCAGGATCAGGTGGCCGTaGGGGTCCAGCGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: RKCGAKGTAGGAAGYPEPRIRWP*GSSVLL
Trigger: CAACAGCACGCTGGACCCCCACGGCCACCTGATCCT...GGGCTCCGGGTACCCAGCGGCTCCACCGGCGGTACCCTTTGCCCCGCACTTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR CCA 90 bp GTGGGTGGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGTGCTGGCTGCAGAGCTaGGCTGCCCGAACTAGGTGT +
Preference number: 4 (lower is better)
Translates to: VGGQAQGGHLVWGMGPVECWLQS*AARTRC
Trigger: ACACCTAGTTCGGGCAGCCCAGCTCTGCAGCCAGCA...CTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCCACCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGTCGCAGGGACCACCTaGTGTGTCTCCGCTCCCATA +
Preference number: 4 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRVAGTT*CVSAPI
Trigger: TATGGGAGCGGAGACACACCAGGTGGTCCCTGCGAC...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGGTCGCAGGGACCACCTaGTGTGTCTCCGCTCCCATA +
Preference number: 4 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGVAGTT*CVSAPI
Trigger: TATGGGAGCGGAGACACACCAGGTGGTCCCTGCGAC...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp GCGGCAGCTCCAGAAATGCAGCCGAGTAGGGGGCTGAGCGCCCGGAGTCTGGAGGAGCCTCCGGGAAGCTaGGGCTCCTGGTGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: AAAPEMQPSRGLSARSLEEPPGS*GSWWEG
Trigger: ACCTTCCCACCAGGAGCCCCAGCTTCCCGGAGGCTC...CTCCAGACTCCGGGCGCTCAGCCCCCTACTCGGCTGCATTTCTGGAGCTGCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR TCA 90 bp GTGGGTGGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGAGGCTGTCACGGAGATaGATGTGGTCTCGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: VGGQAQGGHLVWGMGPVERLSRR*MWSRGS
Trigger: GCTTCCCCGAGACCACATTCATCTCCGTGACAGCCT...CTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCCACCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR GCA 90 bp GTGGGTGGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGCTGCCGCATCCAATGTaGACCAGTGGCAGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: VGGQAQGGHLVWGMGPVELPHPM*TSGRRV
Trigger: GACTCTCCTGCCACTGGTGCACATTGGATGCGGCAG...CTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCCACCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR GCA 90 bp AAAGTGCGGGGCAAAGGGTACCGCCGGTGGAGCCGCTGGGTACCCGGAGCCCCCCTGCCGCATCCAATGTaGACCAGTGGCAGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: KVRGKGYRRWSRWVPGAPLPHPM*TSGRRV
Trigger: GACTCTCCTGCCACTGGTGCACATTGGATGCGGCAG...GGGGGCTCCGGGTACCCAGCGGCTCCACCGGCGGTACCCTTTGCCCCGCACTTT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR GCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGCTGCCGCATCCAATGTaGACCAGTGGCAGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGLPHPM*TSGRRV
Trigger: GACTCTCCTGCCACTGGTGCACATTGGATGCGGCAG...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR GCA 90 bp AGCCGGCCCCAGCTGGACTCCCAGCAGCCTTGGTTAGGCTTTGAAGCCAGAGGGGCCACCACACAGAGGTaGCGGGGCAGCGGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SRPQLDSQQPWLGFEARGATTQR*RGSGGF
Trigger: GAAGCCACCGCTGCCCCGGCACCTCTGTGTGGTGGC...CCCTCTGGCTTCAAAGCCTAACCAAGGCTGCTGGGAGTCCAGCTGGGGCCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR GCA 90 bp AGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGCCGGCGGCCTCAGGTCTCGCTaGTTAGGGCCCCCGGTGAGT +
Preference number: 4 (lower is better)
Translates to: RQSPFHSHGGESREGEAGGLRSR*LGPPVS
Trigger: ACTCACCGGGGGCCCTAAGCAGCGAGACCTGAGGCC...GCCGGCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395224.7
CDS-3UTR CCA 90 bp AGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGCCGGCGAGTGCAGGATCAGGTaGCCGTGGGGGTCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: RQSPFHSHGGESREGEAGECRIR*PWGSSV
Trigger: CACGCTGGACCCCCACGGCCACCTGATCCTGCACTC...GCCGGCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp AGAAAGTGCGGGGCAAAGGGTACCGCCGGTGGAGCCGCTGGGTACCCGGAGCCCTGCTGGCTGCAGAGCTaGGCTGCCCGAACTAGGTGT +
Preference number: 4 (lower is better)
Translates to: RKCGAKGTAGGAAGYPEPCWLQS*AARTRC
Trigger: ACACCTAGTTCGGGCAGCCCAGCTCTGCAGCCAGCA...GGGCTCCGGGTACCCAGCGGCTCCACCGGCGGTACCCTTTGCCCCGCACTTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR CCA 90 bp TGGCCAGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGAGCTGGGGCTCCTGGTaGGAAGGTGACTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: WPGRAPSIHTEVRAGKGKSWGSW*EGDWGP
Trigger: GGGCCCCCAGTCACCTTCCCACCAGGAGCCCCAGCT...CTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCTGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp AGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGCCGGCGGAAGCTGGGGCTCCTaGTGGGAAGGTGACTGGGGG +
Preference number: 4 (lower is better)
Translates to: RQSPFHSHGGESREGEAGGSWGS*WEGDWG
Trigger: CCCCCAGTCACCTTCCCACCAGGAGCCCCAGCTTCC...GCCGGCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp GTGGGTGGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGGTAAGTGGGGATGCTaGTCTGTGGCCCCATTTGGC +
Preference number: 4 (lower is better)
Translates to: VGGQAQGGHLVWGMGPVEGKWGC*SVAPFG
Trigger: GCCAAATGGGGCCACAGACCAGCATCCCCACTTACC...CTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCCACCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp AGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGCCGGCCCCCTCCAGAGCCCATaGGGAGGCCTGGTAAGTGGG +
Preference number: 4 (lower is better)
Translates to: RQSPFHSHGGESREGEAGPLQSP*GGLVSG
Trigger: CCCACTTACCAGGCCTCCCCATGGGCTCTGGAGGGG...GCCGGCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR TCA 90 bp GTGGGTGGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGTCACTGCATTTCTaGTGTCCAGCACGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: VGGQAQGGHLVWGMGPVEVSLHF*CPARCL
Trigger: CAGGCACCGTGCTGGACATCAGAAATGCAGTGACAC...CTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCCACCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR GCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGCGGGGTTGGTACTTGTaGATGGAGTGCAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRRGWYL*MECRIR
Trigger: CCTGATCCTGCACTCCATGCACAAGTACCAACCCCG...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR GCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGCCTGGTAAGTGGGGATaGTGGTCTGTGGCCCCATTT +
Preference number: 4 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRPGKWG*WSVAPF
Trigger: AAATGGGGCCACAGACCAGCATCCCCACTTACCAGG...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp CGCAGGGACCACCTGGTGTGTCACTGCATTTCTGATGTCCAGCACGGTGCCTGGCAGAAGGGGCAGAGGTaGGTGCGCGGCCAGGGTGCG +
Preference number: 4 (lower is better)
Translates to: RRDHLVCHCISDVQHGAWQKGQR*VRGQGA
Trigger: CGCACCCTGGCCGCGCACCCACCTCTGCCCCTTCTG...CCAGGCACCGTGCTGGACATCAGAAATGCAGTGACACACCAGGTGGTCCCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR CCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGTCCAATGTGCACCAGTaGCAGGAGAGTCGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRSNVHQ*QESRGE
Trigger: TTCACCCCGACTCTCCTGCCACTGGTGCACATTGGA...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGGTGAGCTTGACACGATaGAAAGACACAGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGVSLTR*KDTGCR
Trigger: GCGGCAGCCTGTGTCTTTCCATCGTGTCAAGCTCAC...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CCA 90 bp TGGCCAGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGGGCCTCTGTGGCTGCTaGCTCTGGGCCCCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: WPGRAPSIHTEVRAGKGKGLCGC*LWAPQF
Trigger: AAACTGCGGGGCCCAGAGCCAGCAGCCACAGAGGCC...CTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCTGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp AGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGCCGGCTGGTGGGAAGGTGACTaGGGGCCCCATGGAAAGCCG +
Preference number: 4 (lower is better)
Translates to: RQSPFHSHGGESREGEAGWWEGD*GPHGKP
Trigger: CGGCTTTCCATGGGGCCCCCAGTCACCTTCCCACCA...GCCGGCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp TGGCCAGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGAAAGGGTACCGCCGGTaGAGCCGCTGGGTACCCGGA +
Preference number: 4 (lower is better)
Translates to: WPGRAPSIHTEVRAGKGKKGYRR*SRWVPG
Trigger: TCCGGGTACCCAGCGGCTCCACCGGCGGTACCCTTT...CTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCTGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp TGGCCAGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGGAAGCCGGCCCCAGCTaGACTCCCAGCAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: WPGRAPSIHTEVRAGKGKEAGPS*TPSSLG
Trigger: ACCAAGGCTGCTGGGAGTCCAGCTGGGGCCGGCTTC...CTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCTGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp AGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGCCGGCGGGGATGCTGGTCTGTaGCCCCATTTGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RQSPFHSHGGESREGEAGGDAGL*PHLARQ
Trigger: CTGCCTGGCCAAATGGGGCCACAGACCAGCATCCCC...GCCGGCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp AGCCGGCCCCAGCTGGACTCCCAGCAGCCTTGGTTAGGCTTTGAAGCCAGAGGGCCCCTCCAGAGCCCATaGGGAGGCCTGGTAAGTGGG +
Preference number: 4 (lower is better)
Translates to: SRPQLDSQQPWLGFEARGPLQSP*GGLVSG
Trigger: CCCACTTACCAGGCCTCCCCATGGGCTCTGGAGGGG...CCCTCTGGCTTCAAAGCCTAACCAAGGCTGCTGGGAGTCCAGCTGGGGCCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGCCCAGAACAACAGACTaGTGTGGCCTGCACCAGTGT +
Preference number: 4 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRPRTTD*CGLHQC
Trigger: ACACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGG...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR TCA 90 bp GCGGCAGCTCCAGAAATGCAGCCGAGTAGGGGGCTGAGCGCCCGGAGTCTGGAGAGGCTGTCACGGAGATaGATGTGGTCTCGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: AAAPEMQPSRGLSARSLERLSRR*MWSRGS
Trigger: GCTTCCCCGAGACCACATTCATCTCCGTGACAGCCT...CTCCAGACTCCGGGCGCTCAGCCCCCTACTCGGCTGCATTTCTGGAGCTGCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR TCA 90 bp GTGGGTGGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGGCCTGTTCTGGATCTaGTTCACGAATGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: VGGQAQGGHLVWGMGPVEGLFWI*FTNVST
Trigger: GGTGGAGACATTCGTGAATCAGATCCAGAACAGGCC...CTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCCACCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR TCA 90 bp CAGCAGTGGTTCAGTACATGGGTTTGGAGCCCACATCCAGATAGCCCCCAGGCGAGCCGAGTAGGGGGCTaGGCGCCCGGAGTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: QQWFSTWVWSPHPDSPQASRVGG*APGVWS
Trigger: GCTCCAGACTCCGGGCGCTCAGCCCCCTACTCGGCT...CGCCTGGGGGCTATCTGGATGTGGGCTCCAAACCCATGTACTGAACCACTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR TCA 90 bp TGGCCAGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGGAGTCCGACAGCTTCTaGCGCCTCGCGCCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: WPGRAPSIHTEVRAGKGKESDSF*RLAPGF
Trigger: AAACCCTGGCGCGAGGCGTCAGAAGCTGTCGGACTC...CTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395224.7
CDS-3UTR GCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGTGGAAAGACACAGGCTaGCGCATCCAATGTGCACCA +
Preference number: 4 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGWKDTG*RIQCAP
Trigger: TGGTGCACATTGGATGCGGCAGCCTGTGTCTTTCCA...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR GCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGTGGAAAGACACAGGCTaGCGCATCCAATGTGCACCA +
Preference number: 4 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRWKDTG*RIQCAP
Trigger: TGGTGCACATTGGATGCGGCAGCCTGTGTCTTTCCA...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR GCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGCCCTCTTACAGTTTCTaGCGTTCTCCCGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGPSYSF*RSPGSL
Trigger: AAGGCTTCCGGGAGAACGGCAGAAACTGTAAGAGGG...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000279386.6
ENST00000395224.7
CDS-3UTR GCA 90 bp ACGAATGTCTCCACCCAGGGTGGAGTCGCAGGGACCACCTGGTGTGTCACTGCAGCCACCACACAGAGGTaGCGGGGCAGCGGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: TNVSTQGGVAGTTWCVTAATTQR*RGSGGF
Trigger: GAAGCCACCGCTGCCCCGGCACCTCTGTGTGGTGGC...TGCAGTGACACACCAGGTGGTCCCTGCGACTCCACCCTGGGTGGAGACATTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR GCA 90 bp TGGCCAGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGGAGCCCCCTGACCCGTaGGGCAGCTCCAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: WPGRAPSIHTEVRAGKGKEPPDP*GSSRNA
Trigger: TGCATTTCTGGAGCTGCCGCACGGGTCAGGGGGCTC...CTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCTGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR GCA 90 bp TGGCCAGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGCCCCCTTGGAGAAAGTaGGGGGCAAAGGGTACCGCC +
Preference number: 4 (lower is better)
Translates to: WPGRAPSIHTEVRAGKGKPPWRK*GAKGTA
Trigger: GGCGGTACCCTTTGCCCCGCACTTTCTCCAAGGGGG...CTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCTGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGTGTTGTAGTTCCGTCTaGCCTCAGGTCTCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRCCSSV*PQVSLL
Trigger: AAGCAGCGAGACCTGAGGCCAGACGGAACTACAACA...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGTGTTGTAGTTCCGTCTaGCCTCAGGTCTCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGCCSSV*PQVSLL
Trigger: AAGCAGCGAGACCTGAGGCCAGACGGAACTACAACA...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp GGTGGAGCCGCTGGGTACCCGGAGCCCCCTGACCCGTGCGGCAGCTCCAGAAATGTGAGCTTGACACGATaGAAAGACACAGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GGAAGYPEPPDPCGSSRNVSLTR*KDTGCR
Trigger: GCGGCAGCCTGTGTCTTTCCATCGTGTCAAGCTCAC...ATTTCTGGAGCTGCCGCACGGGTCAGGGGGCTCCGGGTACCCAGCGGCTCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR CCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGTTGGTACTTGTGCATaGAGTGCAGGATCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRVGTCA*SAGSGG
Trigger: GCCACCTGATCCTGCACTCCATGCACAAGTACCAAC...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CCA 90 bp AGCCGGCCCCAGCTGGACTCCCAGCAGCCTTGGTTAGGCTTTGAAGCCAGAGGGTGTCTCCACCCAGGGTaGAGTCGCAGGGACCACCTG +
Preference number: 4 (lower is better)
Translates to: SRPQLDSQQPWLGFEARGCLHPG*SRRDHL
Trigger: CAGGTGGTCCCTGCGACTCCACCCTGGGTGGAGACA...CCCTCTGGCTTCAAAGCCTAACCAAGGCTGCTGGGAGTCCAGCTGGGGCCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp AGCCGGCCCCAGCTGGACTCCCAGCAGCCTTGGTTAGGCTTTGAAGCCAGAGGGGGTAGGCCTCAGCACTaGGGCCACCACACAGAGGTG +
Preference number: 4 (lower is better)
Translates to: SRPQLDSQQPWLGFEARGGRPQH*GHHTEV
Trigger: CACCTCTGTGTGGTGGCCCCAGTGCTGAGGCCTACC...CCCTCTGGCTTCAAAGCCTAACCAAGGCTGCTGGGAGTCCAGCTGGGGCCGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp TGGCCAGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGGGTAGGCCTCAGCACTaGGGCCACCACACAGAGGTG +
Preference number: 4 (lower is better)
Translates to: WPGRAPSIHTEVRAGKGKGRPQH*GHHTEV
Trigger: CACCTCTGTGTGGTGGCCCCAGTGCTGAGGCCTACC...CTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp TGGCCAGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGTGGTGGGAAGGTGACTaGGGGCCCCATGGAAAGCCG +
Preference number: 4 (lower is better)
Translates to: WPGRAPSIHTEVRAGKGKWWEGD*GPHGKP
Trigger: CGGCTTTCCATGGGGCCCCCAGTCACCTTCCCACCA...CTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp GCAGGGACCACCTGGTGTGTCACTGCATTTCTGATGTCCAGCACGGTGCCTGGCGGCGGCCATTTGGTGTaGGGGATGGGGCCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: AGTTWCVTAFLMSSTVPGGGHLV*GMGPVE
Trigger: CTCCACCGGCCCCATCCCCCACACCAAATGGCCGCC...GCCAGGCACCGTGCTGGACATCAGAAATGCAGTGACACACCAGGTGGTCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR CCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGACTCCCAGCAGCCTTaGTTAGGCTTTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRDSQQP*LGFEAR
Trigger: TCTGGCTTCAAAGCCTAACCAAGGCTGCTGGGAGTC...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp AGCCGGCCCCAGCTGGACTCCCAGCAGCCTTGGTTAGGCTTTGAAGCCAGAGGGGGGGATGCTGGTCTGTaGCCCCATTTGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SRPQLDSQQPWLGFEARGGDAGL*PHLARQ
Trigger: CTGCCTGGCCAAATGGGGCCACAGACCAGCATCCCC...CCCTCTGGCTTCAAAGCCTAACCAAGGCTGCTGGGAGTCCAGCTGGGGCCGGCT
64% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp TGGCCAGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGGGGAGGCCTGGTAAGTaGGGATGCTGGTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: WPGRAPSIHTEVRAGKGKGRPGK*GCWSVA
Trigger: GGCCACAGACCAGCATCCCCACTTACCAGGCCTCCC...CTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp AGCCGGCCCCAGCTGGACTCCCAGCAGCCTTGGTTAGGCTTTGAAGCCAGAGGGGGGAGGCCTGGTAAGTaGGGATGCTGGTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SRPQLDSQQPWLGFEARGGRPGK*GCWSVA
Trigger: GGCCACAGACCAGCATCCCCACTTACCAGGCCTCCC...CCCTCTGGCTTCAAAGCCTAACCAAGGCTGCTGGGAGTCCAGCTGGGGCCGGCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp AGCCGGCCCCAGCTGGACTCCCAGCAGCCTTGGTTAGGCTTTGAAGCCAGAGGGTGCTGGCTGCAGAGCTaGGCTGCCCGAACTAGGTGT +
Preference number: 4 (lower is better)
Translates to: SRPQLDSQQPWLGFEARGCWLQS*AARTRC
Trigger: ACACCTAGTTCGGGCAGCCCAGCTCTGCAGCCAGCA...CCCTCTGGCTTCAAAGCCTAACCAAGGCTGCTGGGAGTCCAGCTGGGGCCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp GTGGGTGGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGCAGTTGTGTGATCTGTaGGTTCTGGTAGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: VGGQAQGGHLVWGMGPVEQLCDL*VLVGCH
Trigger: GTGACAGCCTACCAGAACCCACAGATCACACAACTG...CTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCCACCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
CDS-3UTR CCA 90 bp AGCCGGCCCCAGCTGGACTCCCAGCAGCCTTGGTTAGGCTTTGAAGCCAGAGGGGTCGCAGGGACCACCTaGTGTGTCTCCGCTCCCATA +
Preference number: 4 (lower is better)
Translates to: SRPQLDSQQPWLGFEARGVAGTT*CVSAPI
Trigger: TATGGGAGCGGAGACACACCAGGTGGTCCCTGCGAC...CCCTCTGGCTTCAAAGCCTAACCAAGGCTGCTGGGAGTCCAGCTGGGGCCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGCAGTGGTTCAGTACATaGGTTTGGAGCCCACATCCA +
Preference number: 4 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRQWFST*VWSPHP
Trigger: TGGATGTGGGCTCCAAACCCATGTACTGAACCACTG...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CCA 90 bp AGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGCCGGCGGTAAGTGGGGATGCTaGTCTGTGGCCCCATTTGGC +
Preference number: 4 (lower is better)
Translates to: RQSPFHSHGGESREGEAGGKWGC*SVAPFG
Trigger: GCCAAATGGGGCCACAGACCAGCATCCCCACTTACC...GCCGGCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR TCA 90 bp TGGCCAGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGAGGCTGTCACGGAGATaGATGTGGTCTCGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: WPGRAPSIHTEVRAGKGKRLSRR*MWSRGS
Trigger: GCTTCCCCGAGACCACATTCATCTCCGTGACAGCCT...CTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR GCA 90 bp GCGGCAGCTCCAGAAATGCAGCCGAGTAGGGGGCTGAGCGCCCGGAGTCTGGAGTGGAAAGACACAGGCTaGCGCATCCAATGTGCACCA +
Preference number: 4 (lower is better)
Translates to: AAAPEMQPSRGLSARSLEWKDTG*RIQCAP
Trigger: TGGTGCACATTGGATGCGGCAGCCTGTGTCTTTCCA...CTCCAGACTCCGGGCGCTCAGCCCCCTACTCGGCTGCATTTCTGGAGCTGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR GCA 90 bp AGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGCCGGCCGGGGTTGGTACTTGTaGATGGAGTGCAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: RQSPFHSHGGESREGEAGRGWYL*MECRIR
Trigger: CCTGATCCTGCACTCCATGCACAAGTACCAACCCCG...GCCGGCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR GCA 90 bp GCGCCCGGAGTCTGGAGCCTCCGGGAAGCTGGGGCTCCTGGTGGGAAGGTGACTCACCTGGTGTGTCACTaGATTTCTGATGTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: APGVWSLREAGAPGGKVTHLVCH*ISDVQH
Trigger: GTGCTGGACATCAGAAATGCAGTGACACACCAGGTG...AGTCACCTTCCCACCAGGAGCCCCAGCTTCCCGGAGGCTCCAGACTCCGGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR CCA 90 bp ACGAATGTCTCCACCCAGGGTGGAGTCGCAGGGACCACCTGGTGTGTCACTGCAACCCCCGGGAGGGAATaGAGGGCCTCTGGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: TNVSTQGGVAGTTWCVTATPGRE*RASGAD
Trigger: ATCAGCTCCAGAGGCCCTCCATTCCCTCCCGGGGGT...TGCAGTGACACACCAGGTGGTCCCTGCGACTCCACCCTGGGTGGAGACATTCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR CCA 90 bp AGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGCCGGCGTGAGCTTGACACGATaGAAAGACACAGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: RQSPFHSHGGESREGEAGVSLTR*KDTGCR
Trigger: GCGGCAGCCTGTGTCTTTCCATCGTGTCAAGCTCAC...GCCGGCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp CAGCAGTGGTTCAGTACATGGGTTTGGAGCCCACATCCAGATAGCCCCCAGGCGGAGTGCAGGATCAGGTaGCCGTGGGGGTCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: QQWFSTWVWSPHPDSPQAECRIR*PWGSSV
Trigger: CACGCTGGACCCCCACGGCCACCTGATCCTGCACTC...CGCCTGGGGGCTATCTGGATGTGGGCTCCAAACCCATGTACTGAACCACTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR CCA 90 bp GCGGCAGCTCCAGAAATGCAGCCGAGTAGGGGGCTGAGCGCCCGGAGTCTGGAGGTTGGTACTTGTGCATaGAGTGCAGGATCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: AAAPEMQPSRGLSARSLEVGTCA*SAGSGG
Trigger: GCCACCTGATCCTGCACTCCATGCACAAGTACCAAC...CTCCAGACTCCGGGCGCTCAGCCCCCTACTCGGCTGCATTTCTGGAGCTGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR CCA 90 bp AGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGCCGGCCCCAGAACAACAGACTaGTGTGGCCTGCACCAGTGT +
Preference number: 4 (lower is better)
Translates to: RQSPFHSHGGESREGEAGPRTTD*CGLHQC
Trigger: ACACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGG...GCCGGCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR GCA 90 bp AGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGCCGGCCCCGAACTAGGTGTATaGGGGGTTGGTACTTGTGCA +
Preference number: 4 (lower is better)
Translates to: RQSPFHSHGGESREGEAGPELGV*GVGTCA
Trigger: TGCACAAGTACCAACCCCGCATACACCTAGTTCGGG...GCCGGCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR GCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGGGCAAAGGGATTGGCTaGAATCTTCAGTTGTGTGAT +
Preference number: 4 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGGKGIG*NLQLCD
Trigger: ATCACACAACTGAAGATTGCAGCCAATCCCTTTGCC...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
CDS-3UTR GCA 90 bp TCAGTACATGGGTTTGGAGCCCACATCCAGATAGCCCCCAGGCGCGGTGTATGGCCCCCTTGGAGAAAGTaGGGGGCAAAGGGTACCGCC +
Preference number: 4 (lower is better)
Translates to: SVHGFGAHIQIAPRRGVWPPWRK*GAKGTA
Trigger: GGCGGTACCCTTTGCCCCGCACTTTCTCCAAGGGGG...CCATACACCGCGCCTGGGGGCTATCTGGATGTGGGCTCCAAACCCATGTACTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR GCA 90 bp AGCCGGCCCCAGCTGGACTCCCAGCAGCCTTGGTTAGGCTTTGAAGCCAGAGGGCCTGGTAAGTGGGGATaGTGGTCTGTGGCCCCATTT +
Preference number: 4 (lower is better)
Translates to: SRPQLDSQQPWLGFEARGPGKWG*WSVAPF
Trigger: AAATGGGGCCACAGACCAGCATCCCCACTTACCAGG...CCCTCTGGCTTCAAAGCCTAACCAAGGCTGCTGGGAGTCCAGCTGGGGCCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp AGCCGGCCCCAGCTGGACTCCCAGCAGCCTTGGTTAGGCTTTGAAGCCAGAGGGTCCAATGTGCACCAGTaGCAGGAGAGTCGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: SRPQLDSQQPWLGFEARGSNVHQ*QESRGE
Trigger: TTCACCCCGACTCTCCTGCCACTGGTGCACATTGGA...CCCTCTGGCTTCAAAGCCTAACCAAGGCTGCTGGGAGTCCAGCTGGGGCCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp CAGCAGTGGTTCAGTACATGGGTTTGGAGCCCACATCCAGATAGCCCCCAGGCGGGTAGGCCTCAGCACTaGGGCCACCACACAGAGGTG +
Preference number: 4 (lower is better)
Translates to: QQWFSTWVWSPHPDSPQAGRPQH*GHHTEV
Trigger: CACCTCTGTGTGGTGGCCCCAGTGCTGAGGCCTACC...CGCCTGGGGGCTATCTGGATGTGGGCTCCAAACCCATGTACTGAACCACTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR CCA 90 bp AGTACATGGGTTTGGAGCCCACATCCAGATAGCCCCCAGGCGCGGTGTATGGTAGGAAGCTGGGGCTCCTaGTGGGAAGGTGACTGGGGG +
Preference number: 4 (lower is better)
Translates to: STWVWSPHPDSPQARCMVGSWGS*WEGDWG
Trigger: CCCCCAGTCACCTTCCCACCAGGAGCCCCAGCTTCC...TACCATACACCGCGCCTGGGGGCTATCTGGATGTGGGCTCCAAACCCATGTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR CCA 90 bp GCGGCAGCTCCAGAAATGCAGCCGAGTAGGGGGCTGAGCGCCCGGAGTCTGGAGCAGTGGTTCAGTACATaGGTTTGGAGCCCACATCCA +
Preference number: 4 (lower is better)
Translates to: AAAPEMQPSRGLSARSLEQWFST*VWSPHP
Trigger: TGGATGTGGGCTCCAAACCCATGTACTGAACCACTG...CTCCAGACTCCGGGCGCTCAGCCCCCTACTCGGCTGCATTTCTGGAGCTGCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR CCA 90 bp AGCCGGCCCCAGCTGGACTCCCAGCAGCCTTGGTTAGGCTTTGAAGCCAGAGGGAGAGGGGCCCAGCAGTaGTTCAGTACATGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: SRPQLDSQQPWLGFEARGRGAQQ*FSTWVW
Trigger: CCAAACCCATGTACTGAACCACTGCTGGGCCCCTCT...CCCTCTGGCTTCAAAGCCTAACCAAGGCTGCTGGGAGTCCAGCTGGGGCCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp AGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGCCGGCGACTCCCAGCAGCCTTaGTTAGGCTTTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: RQSPFHSHGGESREGEAGDSQQP*LGFEAR
Trigger: TCTGGCTTCAAAGCCTAACCAAGGCTGCTGGGAGTC...GCCGGCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp AGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGCCGGCAACAACAGACTGGTGTaGCCTGCACCAGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RQSPFHSHGGESREGEAGNNRLV*PAPVCV
Trigger: CACACACACTGGTGCAGGCCACACCAGTCTGTTGTT...GCCGGCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp CTCTCCCCACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTGCGCCCCAGACCTTCTaGCAGGTGACCGCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: LSPLEISCMRAGALVCFVAPQTF*QVTALR
Trigger: GCGGAGGGCGGTCACCTGCCAGAAGGTCTGGGGCGC...AACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGTGGGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR TCA 90 bp TGGCCAGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGGGCCTGTTCTGGATCTaGTTCACGAATGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: WPGRAPSIHTEVRAGKGKGLFWI*FTNVST
Trigger: GGTGGAGACATTCGTGAATCAGATCCAGAACAGGCC...CTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR GCA 90 bp TGGCCAGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGCCCGAACTAGGTGTATaGGGGGTTGGTACTTGTGCA +
Preference number: 4 (lower is better)
Translates to: WPGRAPSIHTEVRAGKGKPELGV*GVGTCA
Trigger: TGCACAAGTACCAACCCCGCATACACCTAGTTCGGG...CTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCTGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR GCA 90 bp AGCCGGCCCCAGCTGGACTCCCAGCAGCCTTGGTTAGGCTTTGAAGCCAGAGGGCCCGAACTAGGTGTATaGGGGGTTGGTACTTGTGCA +
Preference number: 4 (lower is better)
Translates to: SRPQLDSQQPWLGFEARGPELGV*GVGTCA
Trigger: TGCACAAGTACCAACCCCGCATACACCTAGTTCGGG...CCCTCTGGCTTCAAAGCCTAACCAAGGCTGCTGGGAGTCCAGCTGGGGCCGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp AGTACATGGGTTTGGAGCCCACATCCAGATAGCCCCCAGGCGCGGTGTATGGTATGGTGGGAAGGTGACTaGGGGCCCCATGGAAAGCCG +
Preference number: 4 (lower is better)
Translates to: STWVWSPHPDSPQARCMVWWEGD*GPHGKP
Trigger: CGGCTTTCCATGGGGCCCCCAGTCACCTTCCCACCA...TACCATACACCGCGCCTGGGGGCTATCTGGATGTGGGCTCCAAACCCATGTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR TCA 90 bp CGCAGGGACCACCTGGTGTGTCACTGCATTTCTGATGTCCAGCACGGTGCCTGGCTGTTCCCACAGAGCTaGACTCCTTCCATAGCTCCC +
Preference number: 4 (lower is better)
Translates to: RRDHLVCHCISDVQHGAWLFPQS*TPSIAP
Trigger: GGGAGCTATGGAAGGAGTTCAGCTCTGTGGGAACAG...CCAGGCACCGTGCTGGACATCAGAAATGCAGTGACACACCAGGTGGTCCCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR TCA 90 bp GCGCCCGGAGTCTGGAGCCTCCGGGAAGCTGGGGCTCCTGGTGGGAAGGTGACTGAATGCATGAACAAATaGATGAACAACTCCCACCTC +
Preference number: 4 (lower is better)
Translates to: APGVWSLREAGAPGGKVTECMNK*MNNSHL
Trigger: GAGGTGGGAGTTGTTCATTCATTTGTTCATGCATTC...AGTCACCTTCCCACCAGGAGCCCCAGCTTCCCGGAGGCTCCAGACTCCGGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR CCA 90 bp GCAGGGACCACCTGGTGTGTCACTGCATTTCTGATGTCCAGCACGGTGCCTGGCTCCAATGTGCACCAGTaGCAGGAGAGTCGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: AGTTWCVTAFLMSSTVPGSNVHQ*QESRGE
Trigger: TTCACCCCGACTCTCCTGCCACTGGTGCACATTGGA...GCCAGGCACCGTGCTGGACATCAGAAATGCAGTGACACACCAGGTGGTCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR CCA 90 bp AGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGCCGGCTTCAGTACATGGGTTTaGAGCCCACATCCAGATAGC +
Preference number: 4 (lower is better)
Translates to: RQSPFHSHGGESREGEAGFSTWV*SPHPDS
Trigger: GCTATCTGGATGTGGGCTCCAAACCCATGTACTGAA...GCCGGCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp AGCCGGCCCCAGCTGGACTCCCAGCAGCCTTGGTTAGGCTTTGAAGCCAGAGGGCAGTGGTTCAGTACATaGGTTTGGAGCCCACATCCA +
Preference number: 4 (lower is better)
Translates to: SRPQLDSQQPWLGFEARGQWFST*VWSPHP
Trigger: TGGATGTGGGCTCCAAACCCATGTACTGAACCACTG...CCCTCTGGCTTCAAAGCCTAACCAAGGCTGCTGGGAGTCCAGCTGGGGCCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp GCAGGGACCACCTGGTGTGTCACTGCATTTCTGATGTCCAGCACGGTGCCTGGCAGAGGGGCCCAGCAGTaGTTCAGTACATGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: AGTTWCVTAFLMSSTVPGRGAQQ*FSTWVW
Trigger: CCAAACCCATGTACTGAACCACTGCTGGGCCCCTCT...GCCAGGCACCGTGCTGGACATCAGAAATGCAGTGACACACCAGGTGGTCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR TCA 90 bp ATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATGAGGGCGAGGGCCTCTGGAGCTaGTGGGGCCGGCTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: ISLVCLSTLPTRNQLHEGEGLWS*WGRLSA
Trigger: GGCACTGAGCCGGCCCCATCAGCTCCAGAGGCCCTC...GCCCTCATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR GCA 90 bp AGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGCCGGCGGCAAAGGGATTGGCTaGAATCTTCAGTTGTGTGAT +
Preference number: 4 (lower is better)
Translates to: RQSPFHSHGGESREGEAGGKGIG*NLQLCD
Trigger: ATCACACAACTGAAGATTGCAGCCAATCCCTTTGCC...GCCGGCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279386.6
ENST00000395224.7
CDS-3UTR CCA 90 bp ATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATGAGGGCCAGAAGGGGCAGAGGTaGGTGCGCGGCCAGGGTGCG +
Preference number: 4 (lower is better)
Translates to: ISLVCLSTLPTRNQLHEGQKGQR*VRGQGA
Trigger: CGCACCCTGGCCGCGCACCCACCTCTGCCCCTTCTG...GCCCTCATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CCA 90 bp CTCTCCCCACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTACCCCCGGGAGGGAATaGAGGGCCTCTGGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LSPLEISCMRAGALVCFVTPGRE*RASGAD
Trigger: ATCAGCTCCAGAGGCCCTCCATTCCCTCCCGGGGGT...AACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGTGGGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CCA 90 bp ATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTGCTCTGCCTTGCCGCTaGGCTCCCAGCGCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: INKNTLVPEQQTGVACTSALPCR*APSAGP
Trigger: AGGGCCGGCGCTGGGAGCCCAGCGGCAAGGCAGAGC...ACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp CTCTCCCCACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTAGGATCAGGTGGCCGTaGGGGTCCAGCGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LSPLEISCMRAGALVCFVRIRWP*GSSVLL
Trigger: CAACAGCACGCTGGACCCCCACGGCCACCTGATCCT...AACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGTGGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CCA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGTTAACAAAAATACTCTaGTCCCAGAACAACAGACTG +
Preference number: 4 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGLTKIL*SQNNRL
Trigger: CAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAA...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp ATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATGAGGGCGCGCTTCCGGCCAGCTaGTCCCCGTTCCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: ISLVCLSTLPTRNQLHEGALPAS*SPFPRW
Trigger: CCACCGTGGGAACGGGGACCAGCTGGCCGGAAGCGC...GCCCTCATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CCA 90 bp CTCTCCCCACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTGACAGGGACGCAGTTTaGCGCTTCCGGCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LSPLEISCMRAGALVCFVDRDAV*RFRPAG
Trigger: ACCAGCTGGCCGGAAGCGCCAAACTGCGTCCCTGTC...AACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGTGGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CCA 90 bp CAGCAGTGGTTCAGTACATGGGTTTGGAGCCCACATCCAGATAGCCCCCAGGCGGTCGCAGGGACCACCTaGTGTGTCACTGCATTTCTG +
Preference number: 4 (lower is better)
Translates to: QQWFSTWVWSPHPDSPQAVAGTT*CVTAFL
Trigger: CAGAAATGCAGTGACACACCAGGTGGTCCCTGCGAC...CGCCTGGGGGCTATCTGGATGTGGGCTCCAAACCCATGTACTGAACCACTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR TCA 90 bp CAGCAGTGGTTCAGTACATGGGTTTGGAGCCCACATCCAGATAGCCCCCAGGCGGGCCTGTTCTGGATCTaGTTCACGAATGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: QQWFSTWVWSPHPDSPQAGLFWI*FTNVST
Trigger: GGTGGAGACATTCGTGAATCAGATCCAGAACAGGCC...CGCCTGGGGGCTATCTGGATGTGGGCTCCAAACCCATGTACTGAACCACTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR TCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTACCCGGAGCCCCCTaGCCCGTGCGGCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPVPGAP*PVRQLQ
Trigger: CTGGAGCTGCCGCACGGGTCAGGGGGCTCCGGGTAC...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR GCA 90 bp ATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATGAGGGCGGCCTCAGGTCTCGCTaGTTAGGGCCCCCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: ISLVCLSTLPTRNQLHEGGLRSR*LGPPVL
Trigger: CAGCACCGGGGGCCCTAAGCAGCGAGACCTGAGGCC...GCCCTCATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR GCA 90 bp ATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTAGGCAGGCGGGGCTCTaGCTTGCCGCTGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: INKNTLVPEQQTGVACTSRQAGL*LAAGLP
Trigger: TGGGAGCCCAGCGGCAAGGCAGAGCCCCGCCTGCCT...ACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR GCA 90 bp AGTACATGGGTTTGGAGCCCACATCCAGATAGCCCCCAGGCGCGGTGTATGGTACGGGGTTGGTACTTGTaGATGGAGTGCAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: STWVWSPHPDSPQARCMVRGWYL*MECRIR
Trigger: CCTGATCCTGCACTCCATGCACAAGTACCAACCCCG...TACCATACACCGCGCCTGGGGGCTATCTGGATGTGGGCTCCAAACCCATGTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR GCA 90 bp CAGCAGTGGTTCAGTACATGGGTTTGGAGCCCACATCCAGATAGCCCCCAGGCGCCCGAACTAGGTGTATaGGGGGTTGGTACTTGTGCA +
Preference number: 4 (lower is better)
Translates to: QQWFSTWVWSPHPDSPQAPELGV*GVGTCA
Trigger: TGCACAAGTACCAACCCCGCATACACCTAGTTCGGG...CGCCTGGGGGCTATCTGGATGTGGGCTCCAAACCCATGTACTGAACCACTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR CCA 90 bp ATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTGGGCGGGTGGGAAGCTaGAGTCGGCCCCAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: INKNTLVPEQQTGVACTSGRVGS*SRPQVG
Trigger: CCCAACCTGGGGCCGACTCCAGCTTCCCACCCGCCC...ACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR TCA 90 bp CTCTCCCCACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTAGGCTGTCACGGAGATaGATGTGGTCTCGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LSPLEISCMRAGALVCFVRLSRR*MWSRGS
Trigger: GCTTCCCCGAGACCACATTCATCTCCGTGACAGCCT...AACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGTGGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR GCA 90 bp CTCTCCCCACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTCTGCCGCATCCAATGTaGACCAGTGGCAGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: LSPLEISCMRAGALVCFVLPHPM*TSGRRV
Trigger: GACTCTCCTGCCACTGGTGCACATTGGATGCGGCAG...AACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGTGGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CCA 90 bp AGCCGGCCCCAGCTGGACTCCCAGCAGCCTTGGTTAGGCTTTGAAGCCAGAGGGCGGGTACAATTCTCGTaGATGGTACATGTTGTAGTT +
Preference number: 4 (lower is better)
Translates to: SRPQLDSQQPWLGFEARGRVQFS*MVHVVV
Trigger: AACTACAACATGTACCATCCACGAGAATTGTACCCG...CCCTCTGGCTTCAAAGCCTAACCAAGGCTGCTGGGAGTCCAGCTGGGGCCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp ACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTTGTTTTATGGGCGGGTGGGAAGCTaGAGTCGGCCCCAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: TRNQLHEGRGFGLLCLFYGRVGS*SRPQVG
Trigger: CCCAACCTGGGGCCGACTCCAGCTTCCCACCCGCCC...ATAAAACAAACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CCA 90 bp ATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTAGCTGGGGCTCCTGGTaGGAAGGTGACTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: INKNTLVPEQQTGVACTSSWGSW*EGDWGP
Trigger: GGGCCCCCAGTCACCTTCCCACCAGGAGCCCCAGCT...ACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp ATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTCCCAAGGCGGCCATTTaGTGTGGGGGATGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: INKNTLVPEQQTGVACTSPKAAI*CGGWGR
Trigger: CCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGG...ACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR TCA 90 bp CTCTCCCCACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTCTGTTCCCACAGAGCTaGACTCCTTCCATAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LSPLEISCMRAGALVCFVLFPQS*TPSIAP
Trigger: GGGAGCTATGGAAGGAGTTCAGCTCTGTGGGAACAG...AACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGTGGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR GCA 90 bp ATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTATGGGGCCGGCTCAGTaGCCATGGCAGGGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: INKNTLVPEQQTGVACTSMGPAQ*PWQGAE
Trigger: TTCTGCCCCCTGCCATGGGCACTGAGCCGGCCCCAT...ACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR GCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGCCACCACACAGAGGTaGCGGGGCAGCGGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPATTQR*RGSGGF
Trigger: GAAGCCACCGCTGCCCCGGCACCTCTGTGTGGTGGC...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR GCA 90 bp CTCTCCCCACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTCTCAGCCTCCCAGAGTaGTGGGATTACATGCGTGAG +
Preference number: 4 (lower is better)
Translates to: LSPLEISCMRAGALVCFVLSLPE*WDYMRE
Trigger: CTCACGCATGTAATCCCAGCACTCTGGGAGGCTGAG...AACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGTGGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CCA 90 bp ATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTGAGTGCAGGATCAGGTaGCCGTGGGGGTCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: INKNTLVPEQQTGVACTSECRIR*PWGSSV
Trigger: CACGCTGGACCCCCACGGCCACCTGATCCTGCACTC...ACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp ATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTGAGCCTCCGGGAAGCTaGGGCTCCTGGTGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: INKNTLVPEQQTGVACTSEPPGS*GSWWEG
Trigger: ACCTTCCCACCAGGAGCCCCAGCTTCCCGGAGGCTC...ACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGGCGGCCATTTGGTGTaGGGGATGGGGCCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPGGHLV*GMGPVE
Trigger: CTCCACCGGCCCCATCCCCCACACCAAATGGCCGCC...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp ATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTCCCCTCCAGAGCCCATaGGGAGGCCTGGTAAGTGGG +
Preference number: 4 (lower is better)
Translates to: INKNTLVPEQQTGVACTSPLQSP*GGLVSG
Trigger: CCCACTTACCAGGCCTCCCCATGGGCTCTGGAGGGG...ACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp ACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTTGTTTTATGCGGGGCCTGGAACCTaGACGGAGCCAAGAGTCCCG +
Preference number: 4 (lower is better)
Translates to: TRNQLHEGRGFGLLCLFYAGPGT*TEPRVP
Trigger: CGGGACTCTTGGCTCCGTCCAGGTTCCAGGCCCCGC...ATAAAACAAACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CCA 90 bp ACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTTGTTTTATTCCCCGTTCCCACGGTaGGGAGCCCCGGCTAGGGAT +
Preference number: 4 (lower is better)
Translates to: TRNQLHEGRGFGLLCLFYSPFPR*GAPARD
Trigger: ATCCCTAGCCGGGGCTCCCCACCGTGGGAACGGGGA...ATAAAACAAACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000553607.1
3UTR CAA 72 bp CAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTaGTTTTATCTCCAGTGCCTGGAACTGTCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: QLHEGRGFGLLC*FYLQCLELSLA
Trigger: TGCCAGGGACAGTTCCAGGCACTGGAGATAAAACAAACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR TCA 90 bp CTCTCCCCACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTTTACCACTGCATTTCTaGTGTCCAGCACGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LSPLEISCMRAGALVCFVLPLHF*CPARCL
Trigger: CAGGCACCGTGCTGGACATCAGAAATGCAGTGGTAA...AACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGTGGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR GCA 90 bp CTCTCCCCACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTTGGAAAGACACAGGCTaGCGCATCCAATGTGCACCA +
Preference number: 4 (lower is better)
Translates to: LSPLEISCMRAGALVCFVWKDTG*RIQCAP
Trigger: TGGTGCACATTGGATGCGGCAGCCTGTGTCTTTCCA...AACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGTGGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR GCA 90 bp CTCTCCCCACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTCCCGAACTAGGTGTATaGGGGGTTGGTACTTGTGCA +
Preference number: 4 (lower is better)
Translates to: LSPLEISCMRAGALVCFVPELGV*GVGTCA
Trigger: TGCACAAGTACCAACCCCGCATACACCTAGTTCGGG...AACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGTGGGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR GCA 90 bp GGGCCTGTTCTGGATCTGATTCACGAATGTCTCCACCCAGGGTGGAGTCGCAGGGGCAAAGGGATTGGCTaGAATCTTCAGTTGTGTGAT +
Preference number: 4 (lower is better)
Translates to: GPVLDLIHECLHPGWSRRGKGIG*NLQLCD
Trigger: ATCACACAACTGAAGATTGCAGCCAATCCCTTTGCC...CCTGCGACTCCACCCTGGGTGGAGACATTCGTGAATCAGATCCAGAACAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR CCA 90 bp TTATTTATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATGCTCTGCCTTGCCGCTaGGCTCCCAGCGCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: LFISLVCLSTLPTRNQLHALPCR*APSAGP
Trigger: AGGGCCGGCGCTGGGAGCCCAGCGGCAAGGCAGAGC...ATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAATAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CCA 90 bp ATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTAGGATCAGGTGGCCGTaGGGGTCCAGCGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: INKNTLVPEQQTGVACTSRIRWP*GSSVLL
Trigger: CAACAGCACGCTGGACCCCCACGGCCACCTGATCCT...ACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp ATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATGAGGGCTGCTGGCTGCAGAGCTaGGCTGCCCGAACTAGGTGT +
Preference number: 4 (lower is better)
Translates to: ISLVCLSTLPTRNQLHEGCWLQS*AARTRC
Trigger: ACACCTAGTTCGGGCAGCCCAGCTCTGCAGCCAGCA...GCCCTCATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CCA 90 bp ATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTGGTAGGCCTCAGCACTaGGGCCACCACACAGAGGTG +
Preference number: 4 (lower is better)
Translates to: INKNTLVPEQQTGVACTSGRPQH*GHHTEV
Trigger: CACCTCTGTGTGGTGGCCCCAGTGCTGAGGCCTACC...ACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAAAAGGGTACCGCCGGTaGAGCCGCTGGGTACCCGGA +
Preference number: 4 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPKGYRR*SRWVPG
Trigger: TCCGGGTACCCAGCGGCTCCACCGGCGGTACCCTTT...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp AGTACATGGGTTTGGAGCCCACATCCAGATAGCCCCCAGGCGCGGTGTATGGTATTCAGTACATGGGTTTaGAGCCCACATCCAGATAGC +
Preference number: 4 (lower is better)
Translates to: STWVWSPHPDSPQARCMVFSTWV*SPHPDS
Trigger: GCTATCTGGATGTGGGCTCCAAACCCATGTACTGAA...TACCATACACCGCGCCTGGGGGCTATCTGGATGTGGGCTCCAAACCCATGTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS-3UTR CCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGAAGCCGGCCCCAGCTaGACTCCCAGCAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPEAGPS*TPSSLG
Trigger: ACCAAGGCTGCTGGGAGTCCAGCTGGGGCCGGCTTC...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp ATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTGTCTGTGGCCCCATTTaGCCAGGCAGAGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: INKNTLVPEQQTGVACTSVCGPI*PGRAPS
Trigger: GGAAGGGGCTCTGCCTGGCCAAATGGGGCCACAGAC...ACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp AGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGCCGGCTTTCCTGAGCATGGATaGCTTTTGAGTTTTATTAAC +
Preference number: 4 (lower is better)
Translates to: RQSPFHSHGGESREGEAGFPEHG*LLSFIN
Trigger: GTTAATAAAACTCAAAAGCCATCCATGCTCAGGAAA...GCCGGCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395224.7
CDS-3UTR CCA 90 bp ACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTTGTTTTATAGGGGGTCGGATACCTaGGTACGGTCCCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: TRNQLHEGRGFGLLCLFYRGSDT*VRSPPP
Trigger: GGGAGGAGGGGACCGTACCCAGGTATCCGACCCCCT...ATAAAACAAACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR TCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCACCATTCACACGGAGGTaGGAGCCGGGAAGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPPFTRR*EPGRGS
Trigger: GCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGG...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR GCA 90 bp TTATTTATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATAGGCAGGCGGGGCTCTaGCTTGCCGCTGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: LFISLVCLSTLPTRNQLHRQAGL*LAAGLP
Trigger: TGGGAGCCCAGCGGCAAGGCAGAGCCCCGCCTGCCT...ATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAATAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR GCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGAGCCCCCTGACCCGTaGGGCAGCTCCAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPEPPDP*GSSRNA
Trigger: TGCATTTCTGGAGCTGCCGCACGGGTCAGGGGGCTC...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAACCCCCGGGAGGGAATaGAGGGCCTCTGGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPTPGRE*RASGAD
Trigger: ATCAGCTCCAGAGGCCCTCCATTCCCTCCCGGGGGT...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCATGGTGGGAAGGTGACTaGGGGCCCCATGGAAAGCCG +
Preference number: 4 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPWWEGD*GPHGKP
Trigger: CGGCTTTCCATGGGGCCCCCAGTCACCTTCCCACCA...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTCTGTGGCCCCATTTaGCCAGGCAGAGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPVCGPI*PGRAPS
Trigger: GGAAGGGGCTCTGCCTGGCCAAATGGGGCCACAGAC...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp CTCTCCCCACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTGCCTGGAACTGTCCCTaGCACATAGCAGGTACTATA +
Preference number: 4 (lower is better)
Translates to: LSPLEISCMRAGALVCFVAWNCP*HIAGTI
Trigger: TATAGTACCTGCTATGTGCCAGGGACAGTTCCAGGC...AACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGTGGGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CCA 90 bp ATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTATGATGATGATGGTCTaGGCAGGGGGCCACCACCCC +
Preference number: 4 (lower is better)
Translates to: INKNTLVPEQQTGVACTSMMMMV*AGGHHP
Trigger: GGGGTGGTGGCCCCCTGCCCAGACCATCATCATCAT...ACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000627355.2
CDS-3UTR CCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGGGCGTCTCGCTCCCTaGGGAACAGTGGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPGRLAP*GTVVVM
Trigger: CATCACCACCACTGTTCCCCAGGGAGCGAGACGCCC...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627355.2
CDS-3UTR TCA 90 bp TTATTTATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATCGGGGTCCAGGCCAGTaGCTGACACTCGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LFISLVCLSTLPTRNQLHRGPGQ*LTLGRQ
Trigger: CTGCCTGCCGAGTGTCAGTCACTGGCCTGGACCCCG...ATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAATAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR TCA 90 bp ACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTTGTTTTATACTCCTCGGCTTGATTaGTCCCCAGGGCTCGGACAG +
Preference number: 4 (lower is better)
Translates to: TRNQLHEGRGFGLLCLFYTPRLD*SPGLGQ
Trigger: CTGTCCGAGCCCTGGGGATCAATCAAGCCGAGGAGT...ATAAAACAAACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR GCA 90 bp ATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTCTGCCGCATCCAATGTaGACCAGTGGCAGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: INKNTLVPEQQTGVACTSLPHPM*TSGRRV
Trigger: GACTCTCCTGCCACTGGTGCACATTGGATGCGGCAG...ACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR GCA 90 bp ATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATGAGGGCCCACTAGAAATCAGCTaGATGAGGGCCGGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: ISLVCLSTLPTRNQLHEGPLEIS*MRAGAL
Trigger: CAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGTGG...GCCCTCATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CCA 90 bp ATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATGAGGGCGTGAGCTTGACACGATaGAAAGACACAGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: ISLVCLSTLPTRNQLHEGVSLTR*KDTGCR
Trigger: GCGGCAGCCTGTGTCTTTCCATCGTGTCAAGCTCAC...GCCCTCATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCATGCTGGCTGCAGAGCTaGGCTGCCCGAACTAGGTGT +
Preference number: 4 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPCWLQS*AARTRC
Trigger: ACACCTAGTTCGGGCAGCCCAGCTCTGCAGCCAGCA...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp TTATTTATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATCGGCTAGGGATAAGCTaGGGGGCGGGGCCTGGAACC +
Preference number: 4 (lower is better)
Translates to: LFISLVCLSTLPTRNQLHRLGIS*GAGPGT
Trigger: GGTTCCAGGCCCCGCCCCCCAGCTTATCCCTAGCCG...ATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAATAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR TCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAAGGCTGTCACGGAGATaGATGTGGTCTCGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPRLSRR*MWSRGS
Trigger: GCTTCCCCGAGACCACATTCATCTCCGTGACAGCCT...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR TCA 90 bp TTATTTATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATGGACGCGGCCTGAGCTaGTTTCACAGGGCACTCGGG +
Preference number: 4 (lower is better)
Translates to: LFISLVCLSTLPTRNQLHGRGLS*FHRALG
Trigger: CCCGAGTGCCCTGTGAAATCAGCTCAGGCCGCGTCC...ATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAATAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR GCA 90 bp ATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTCGGGGTTGGTACTTGTaGATGGAGTGCAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: INKNTLVPEQQTGVACTSRGWYL*MECRIR
Trigger: CCTGATCCTGCACTCCATGCACAAGTACCAACCCCG...ACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR GCA 90 bp ACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTTGTTTTATCCCGGTGCTGCGAGATaGCCCCTTTATAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: TRNQLHEGRGFGLLCLFYPGAAR*PLYSSQ
Trigger: CTGTGAGCTATAAAGGGGGCATCTCGCAGCACCGGG...ATAAAACAAACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CCA 90 bp TTATTTATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATGAGTGCAGGATCAGGTaGCCGTGGGGGTCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: LFISLVCLSTLPTRNQLHECRIR*PWGSSV
Trigger: CACGCTGGACCCCCACGGCCACCTGATCCTGCACTC...ATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAATAAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CCA 90 bp ATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATGAGGGCGTTGGTACTTGTGCATaGAGTGCAGGATCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: ISLVCLSTLPTRNQLHEGVGTCA*SAGSGG
Trigger: GCCACCTGATCCTGCACTCCATGCACAAGTACCAAC...GCCCTCATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CCA 90 bp ATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTAGAGGGGCCCAGCAGTaGTTCAGTACATGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: INKNTLVPEQQTGVACTSRGAQQ*FSTWVW
Trigger: CCAAACCCATGTACTGAACCACTGCTGGGCCCCTCT...ACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp ATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTCCCAGAACAACAGACTaGTGTGGCCTGCACCAGTGT +
Preference number: 4 (lower is better)
Translates to: INKNTLVPEQQTGVACTSPRTTD*CGLHQC
Trigger: ACACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGG...ACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp TTATTTATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATTCCCGGGACACACCTTaGCGCCCCAGACCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LFISLVCLSTLPTRNQLHSRDTP*RPRPSG
Trigger: GCCAGAAGGTCTGGGGCGCCAAGGTGTGTCCCGGGA...ATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAATAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR TCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCACTGTTCCCACAGAGCTaGACTCCTTCCATAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPLFPQS*TPSIAP
Trigger: GGGAGCTATGGAAGGAGTTCAGCTCTGTGGGAACAG...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR TCA 90 bp ACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTTGTTTTATATTAACTCCTCGGCTTaGTTGATCCCCAGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: TRNQLHEGRGFGLLCLFYINSSA*LIPRAR
Trigger: CCGAGCCCTGGGGATCAATCAAGCCGAGGAGTTAAT...ATAAAACAAACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR TCA 90 bp CTCTCCCCACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTGAATGCATGAACAAATaGATGAACAACTCCCACCTC +
Preference number: 4 (lower is better)
Translates to: LSPLEISCMRAGALVCFVECMNK*MNNSHL
Trigger: GAGGTGGGAGTTGTTCATTCATTTGTTCATGCATTC...AACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGTGGGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR GCA 90 bp ACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTTGTTTTATCGGGGTTGGTACTTGTaGATGGAGTGCAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: TRNQLHEGRGFGLLCLFYRGWYL*MECRIR
Trigger: CCTGATCCTGCACTCCATGCACAAGTACCAACCCCG...ATAAAACAAACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CCA 90 bp ATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATGAGGGCCAGTTGTGTGATCTGTaGGTTCTGGTAGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: ISLVCLSTLPTRNQLHEGQLCDL*VLVGCH
Trigger: GTGACAGCCTACCAGAACCCACAGATCACACAACTG...GCCCTCATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR TCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGGCCTGTTCTGGATCTaGTTCACGAATGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPGLFWI*FTNVST
Trigger: GGTGGAGACATTCGTGAATCAGATCCAGAACAGGCC...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR GCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCATGGAAAGACACAGGCTaGCGCATCCAATGTGCACCA +
Preference number: 4 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPWKDTG*RIQCAP
Trigger: TGGTGCACATTGGATGCGGCAGCCTGTGTCTTTCCA...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR GCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCACCCTCTTACAGTTTCTaGCGTTCTCCCGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPPSYSF*RSPGSL
Trigger: AAGGCTTCCGGGAGAACGGCAGAAACTGTAAGAGGG...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279386.6
ENST00000395224.7
CDS-3UTR GCA 90 bp ATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATGAGGGCTTGCCTAGGCTGGAATaGAATGGCATGATCTCGACT +
Preference number: 4 (lower is better)
Translates to: ISLVCLSTLPTRNQLHEGLPRLE*NGMIST
Trigger: AGTCGAGATCATGCCATTGCATTCCAGCCTAGGCAA...GCCCTCATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CCA 90 bp ACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTTGTTTTATTGTTGTAGTTCCGTCTaGCCTCAGGTCTCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: TRNQLHEGRGFGLLCLFYCCSSV*PQVSLL
Trigger: AAGCAGCGAGACCTGAGGCCAGACGGAACTACAACA...ATAAAACAAACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCATGTTGTAGTTCCGTCTaGCCTCAGGTCTCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPCCSSV*PQVSLL
Trigger: AAGCAGCGAGACCTGAGGCCAGACGGAACTACAACA...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTTGGTACTTGTGCATaGAGTGCAGGATCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPVGTCA*SAGSGG
Trigger: GCCACCTGATCCTGCACTCCATGCACAAGTACCAAC...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAAACAACAGACTGGTGTaGCCTGCACCAGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPNNRLV*PAPVCV
Trigger: CACACACACTGGTGCAGGCCACACCAGTCTGTTGTT...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR TCA 90 bp TTATTTATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATTGGAGGGAAGCAGCGTaGACAGAGGGAAAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LFISLVCLSTLPTRNQLHWREAA*TEGKCR
Trigger: CCTGCACTTTCCCTCTGTTCACGCTGCTTCCCTCCA...ATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAATAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR GCA 90 bp ATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATGAGGGCGGCAAAGGGATTGGCTaGAATCTTCAGTTGTGTGAT +
Preference number: 4 (lower is better)
Translates to: ISLVCLSTLPTRNQLHEGGKGIG*NLQLCD
Trigger: ATCACACAACTGAAGATTGCAGCCAATCCCTTTGCC...GCCCTCATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCACAGTTGTGTGATCTGTaGGTTCTGGTAGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPQLCDL*VLVGCH
Trigger: GTGACAGCCTACCAGAACCCACAGATCACACAACTG...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279386.6
ENST00000395224.7
CDS-3UTR CCA 90 bp ATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTTTCAGTACATGGGTTTaGAGCCCACATCCAGATAGC +
Preference number: 4 (lower is better)
Translates to: INKNTLVPEQQTGVACTSFSTWV*SPHPDS
Trigger: GCTATCTGGATGTGGGCTCCAAACCCATGTACTGAA...ACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp TTATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCACAGTGGTTCAGTACATaGGTTTGGAGCCCACATCCA +
Preference number: 4 (lower is better)
Translates to: LLTKILWSQNNRLVWPAPQWFST*VWSPHP
Trigger: TGGATGTGGGCTCCAAACCCATGTACTGAACCACTG...TGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CCA 90 bp ACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTTGTTTTATAGCCTCCCAAGTAGTTaGGATTACAGGCGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: TRNQLHEGRGFGLLCLFYSLPSS*DYRRLP
Trigger: TGGCAAACGCCTGTAATCCCAACTACTTGGGAGGCT...ATAAAACAAACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CCA 90 bp TTATTTATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATTCCAATGTGCACCAGTaGCAGGAGAGTCGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: LFISLVCLSTLPTRNQLHSNVHQ*QESRGE
Trigger: TTCACCCCGACTCTCCTGCCACTGGTGCACATTGGA...ATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAATAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CCA 90 bp ACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTTGTTTTATGTGAGCCACCACACCTaGTCTCTCTTCTCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: TRNQLHEGRGFGLLCLFYVSHHT*SLFSLE
Trigger: TTCTAAAGAGAAGAGAGACCAGGTGTGGTGGCTCAC...ATAAAACAAACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR GCA 90 bp ACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTTGTTTTATAAGTTTTGCTCGTGTTaGCTAGGCTGGAATGCAATG +
Preference number: 4 (lower is better)
Translates to: TRNQLHEGRGFGLLCLFYKFCSC*LGWNAM
Trigger: CATTGCATTCCAGCCTAGGCAACACGAGCAAAACTT...ATAAAACAAACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CCA 90 bp ATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTTTAACAAAAATACTCTaGTCCCAGAACAACAGACTG +
Preference number: 4 (lower is better)
Translates to: INKNTLVPEQQTGVACTSLTKIL*SQNNRL
Trigger: CAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAA...ACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR GCA 90 bp TTATTTATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATGTTTTCACTTACCACTaGATTTCTGATGTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LFISLVCLSTLPTRNQLHVFTYH*ISDVQH
Trigger: GTGCTGGACATCAGAAATGCAGTGGTAAGTGAAAAC...ATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAATAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS GCA 90 bp AGGAGAGTCGGGGTGAATGTAGACACGGTCAGGCAGGCGGGGCTCTaGCTTGCCGCTGGGCTCCCAGCGCCGGCCCTGCCAGCGGTAGCG +
Preference number: 5 (lower is better)
Translates to: RRVGVNVDTVRQAGL*LAAGLPAPALPAVA
Trigger: CGCTACCGCTGGCAGGGCCGGCGCTGGGAGCCCAGCGGCAAGGCAGAGCCCCGCCTGCCTGACCGTGTCTACATTCACCCCGACTCTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000553607.1
ENST00000567664.5
ENST00000627355.2
CDS CCA 90 bp GGTGAATGTAGACACGGTCAGGCAGGCGGGGCTCTGCCTTGCCGCTaGGCTCCCAGCGCCGGCCCTGCCAGCGGTAGCGAGCCCCATCCA +
Preference number: 5 (lower is better)
Translates to: GECRHGQAGGALPCR*APSAGPASGSEPHP
Trigger: TGGATGGGGCTCGCTACCGCTGGCAGGGCCGGCGCTGGGAGCCCAGCGGCAAGGCAGAGCCCCGCCTGCCTGACCGTGTCTACATTCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000553607.1
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CAA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGGTCCAGCGTGCTGTaGGTGAGCTTGACACGATGG +
Preference number: 5 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRGSSVL*VSLTRW
Trigger: CCATCGTGTCAAGCTCACCAACAGCACGCTGGACCC...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS CCA 90 bp ACCTGGTGTGTCTCCGCTCCCATAGGCCTCTGTGGCTGCTGGCTCTaGGCCCCGCAGTTTCCTCTTCACACGGGCGTCTCGCTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: TWCVSAPIGLCGCWL*APQFPLHTGVSLPG
Trigger: CCCAGGGAGCGAGACGCCCGTGTGAAGAGGAAACTGCGGGGCCCAGAGCCAGCAGCCACAGAGGCCTATGGGAGCGGAGACACACCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627355.2
CDS CCA 90 bp GGGCCCCAGGCGGTAGCCGGCCCCCAGGGACGGGTACAATTCTCGTaGATGGTACATGTTGTAGTTCCGTCTGGCCTCAGGTCTCGCTGC +
Preference number: 5 (lower is better)
Translates to: GPQAVAGPQGRVQFS*MVHVVVPSGLRSRC
Trigger: GCAGCGAGACCTGAGGCCAGACGGAACTACAACATGTACCATCCACGAGAATTGTACCCGTCCCTGGGGGCCGGCTACCGCCTGGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000553607.1
ENST00000627355.2
CDS CCA 90 bp ACCTGGTGTGTCTCCGCTCCCATAGGCCTCTGTGGCTGCTGGCTCTaGGCCCCGCAGTTTCCTCTTCACACGGGCGTCTCGCTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: TWCVSAPIGLCGCWL*APQFPLHTGVSLPL
Trigger: AAGAGGGAGCGAGACGCCCGTGTGAAGAGGAAACTGCGGGGCCCAGAGCCAGCAGCCACAGAGGCCTATGGGAGCGGAGACACACCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279386.6
ENST00000395224.7
CDS-3UTR CAA 90 bp GGGCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGTGCTGTTGGTGAGCTaGACACGATGGAAAGACACA +
Preference number: 5 (lower is better)
Translates to: GQAQGGHLVWGMGPVEVRVLLVS*TRWKDT
Trigger: TGTGTCTTTCCATCGTGTCAAGCTCACCAACAGCAC...CCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CAA 90 bp GCAGGCCCAAGGCGGCCATTTGGTGTGGGGGATGGGGCCGGTGGAGGTGAGGGGGTGCTGTTGGTGAGCTaGACACGATGGAAAGACACA +
Preference number: 5 (lower is better)
Translates to: AGPRRPFGVGDGAGGGEGVLLVS*TRWKDT
Trigger: TGTGTCTTTCCATCGTGTCAAGCTCACCAACAGCAC...CCCCTCACCTCCACCGGCCCCATCCCCCACACCAAATGGCCGCCTTGGGCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000567664.5
ENST00000627355.2
CDS-3UTR CAA 90 bp CGGAGCCCCCTGACCCGTGCGGCAGCTCCAGAAATGCAGCCGAGTAGGGGGCTGGGCTGCAATCTTCAGTaGTGTGATCTGTGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: RSPLTRAAAPEMQPSRGLGCNLQ*CDLWVL
Trigger: CAGAACCCACAGATCACACAACTGAAGATTGCAGCC...CAGCCCCCTACTCGGCTGCATTTCTGGAGCTGCCGCACGGGTCAGGGGGCTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567664.5
CDS TCA 90 bp TCACATCCAGAAGAAACAAGTAGCGGGCCTCGGGGTCCAGGCCAGTaGCTGACACTCGGCAGGCAGGGAACATGCGCCTCCCAGCTTTGG +
Preference number: 5 (lower is better)
Translates to: SHPEETSSGPRGPGQ*LTLGRQGTCASQLW
Trigger: CCAAAGCTGGGAGGCGCATGTTCCCTGCCTGCCGAGTGTCAGTCACTGGCCTGGACCCCGAGGCCCGCTACTTGTTTCTTCTGGATGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000553607.1
ENST00000567664.5
ENST00000627355.2
CDS CCA 90 bp CTGGGGCCTGTTCTGGATCTGATTCACGAATGTCTCCACCCAGGGTaGAGTCGCAGGGACCACCTGGTGTGTCTCCGCTCCCATAGGCCT +
Preference number: 5 (lower is better)
Translates to: LGPVLDLIHECLHPG*SRRDHLVCLRSHRP
Trigger: AGGCCTATGGGAGCGGAGACACACCAGGTGGTCCCTGCGACTCCACCCTGGGTGGAGACATTCGTGAATCAGATCCAGAACAGGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS TCA 90 bp ATCCAGAAGAAACAAGTAGCGGGCCTCGGGGTCCAGGCCAGTGACTaGCACTCGGCAGGCAGGGAACATGCGCCTCCCAGCTTTGGTGAT +
Preference number: 5 (lower is better)
Translates to: IQKKQVAGLGVQASD*HSAGREHAPPSFGD
Trigger: ATCACCAAAGCTGGGAGGCGCATGTTCCCTGCCTGCCGAGTGTCAGTCACTGGCCTGGACCCCGAGGCCCGCTACTTGTTTCTTCTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000553607.1
ENST00000567664.5
ENST00000627355.2
CDS CCA 90 bp GGGACGGGTACAATTCTCGTGGATGGTACATGTTGTAGTTCCGTCTaGCCTCAGGTCTCGCTGCTTAGGGCCCCCGGTGAGTCCGACAGC +
Preference number: 5 (lower is better)
Translates to: GTGTILVDGTCCSSV*PQVSLLRAPGESDS
Trigger: GCTGTCGGACTCACCGGGGGCCCTAAGCAGCGAGACCTGAGGCCAGACGGAACTACAACATGTACCATCCACGAGAATTGTACCCGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395224.7
CDS CCA 90 bp GGGACGGGTACAATTCTCGTGGATGGTACATGTTGTAGTTCCGTCTaGCCTCAGGTCTCGCTGCTTAGGGCCCCCGGTGCTGCGAGATGC +
Preference number: 5 (lower is better)
Translates to: GTGTILVDGTCCSSV*PQVSLLRAPGAARC
Trigger: GCATCTCGCAGCACCGGGGGCCCTAAGCAGCGAGACCTGAGGCCAGACGGAACTACAACATGTACCATCCACGAGAATTGTACCCGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CAA 90 bp AGGCAGAGCCCCTTCCATTCACACGGAGGTGAGAGCCGGGAAGGGGAAGCCGGCGGCTGCAATCTTCAGTaGTGTGATCTGTGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: RQSPFHSHGGESREGEAGGCNLQ*CDLWVL
Trigger: CAGAACCCACAGATCACACAACTGAAGATTGCAGCC...GCCGGCTTCCCCTTCCCGGCTCTCACCTCCGTGTGAATGGAAGGGGCTCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279386.6
ENST00000395224.7
CDS-3UTR CAA 90 bp CTCTCCCCACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTGTCCCGGGACACACCTaGGCGCCCCAGACCTTCTGG +
Preference number: 5 (lower is better)
Translates to: LSPLEISCMRAGALVCFVVPGHT*APQTFW
Trigger: CCAGAAGGTCTGGGGCGCCAAGGTGTGTCCCGGGAC...AACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGTGGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS GCA 90 bp TCGTGGATGGTACATGTTGTAGTTCCGTCTGGCCTCAGGTCTCGCTaGTTAGGGCCCCCGGTGCTGCGAGATGCCCCCTTTATAGCTCAC +
Preference number: 5 (lower is better)
Translates to: SWMVHVVVPSGLRSR*LGPPVLRDAPFIAH
Trigger: GTGAGCTATAAAGGGGGCATCTCGCAGCACCGGGGGCCCTAAGCAGCGAGACCTGAGGCCAGACGGAACTACAACATGTACCATCCACGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CAA 90 bp AGCCGGCCCCAGCTGGACTCCCAGCAGCCTTGGTTAGGCTTTGAAGCCAGAGGGGGCTGCAATCTTCAGTaGTGTGATCTGTGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: SRPQLDSQQPWLGFEARGGCNLQ*CDLWVL
Trigger: CAGAACCCACAGATCACACAACTGAAGATTGCAGCC...CCCTCTGGCTTCAAAGCCTAACCAAGGCTGCTGGGAGTCCAGCTGGGGCCGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279386.6
ENST00000395224.7
CDS-3UTR CAA 90 bp ATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATGAGGGCGGCTGCAATCTTCAGTaGTGTGATCTGTGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: ISLVCLSTLPTRNQLHEGGCNLQ*CDLWVL
Trigger: CAGAACCCACAGATCACACAACTGAAGATTGCAGCC...GCCCTCATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CAA 90 bp ATTAACAAAAATACTCTGGTCCCAGAACAACAGACTGGTGTGGCCTGCACCAGTGTGCTGTTGGTGAGCTaGACACGATGGAAAGACACA +
Preference number: 5 (lower is better)
Translates to: INKNTLVPEQQTGVACTSVLLVS*TRWKDT
Trigger: TGTGTCTTTCCATCGTGTCAAGCTCACCAACAGCAC...ACTGGTGCAGGCCACACCAGTCTGTTGTTCTGGGACCAGAGTATTTTTGTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS-3UTR CAA 90 bp CTCTCCCCACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTTTTGGTTTGCTTTGTTaGTTTTATCTCCAGTGCCTG +
Preference number: 5 (lower is better)
Translates to: LSPLEISCMRAGALVCFVFGLLC*FYLQCL
Trigger: CAGGCACTGGAGATAAAACAAACAAAGCAAACCAAA...AACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGTGGGGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CAA 90 bp ATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATGAGGGCGGCCGGGGCTTTGGTTaGCTTTGTTTGTTTTATCTC +
Preference number: 5 (lower is better)
Translates to: ISLVCLSTLPTRNQLHEGGRGFG*LCLFYL
Trigger: GAGATAAAACAAACAAAGCAAACCAAAGCCCCGGCC...GCCCTCATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CAA 90 bp ACTAGAAATCAGCTGCATGAGGGCCGGGGCTTTGGTTTGCTTTGTTTGTTTTATATTTCTCTTGTCTGCTaGTCTACTCTCCCCACTAGA +
Preference number: 5 (lower is better)
Translates to: TRNQLHEGRGFGLLCLFYISLVC*STLPTR
Trigger: TCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAAT...ATAAAACAAACAAAGCAAACCAAAGCCCCGGCCCTCATGCAGCTGATTTCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CAA 90 bp TTATTTATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATGTGCTGTTGGTGAGCTaGACACGATGGAAAGACACA +
Preference number: 5 (lower is better)
Translates to: LFISLVCLSTLPTRNQLHVLLVS*TRWKDT
Trigger: TGTGTCTTTCCATCGTGTCAAGCTCACCAACAGCAC...ATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAATAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CAA 90 bp TTATTTATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATATGAGGGCCGGGGCTTaGGTTTGCTTTGTTTGTTTT +
Preference number: 5 (lower is better)
Translates to: LFISLVCLSTLPTRNQLHMRAGA*VCFVCF
Trigger: AAAACAAACAAAGCAAACCAAAGCCCCGGCCCTCAT...ATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAATAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS-3UTR CAA 90 bp TTATTTATTTCTCTTGTCTGCTTGTCTACTCTCCCCACTAGAAATCAGCTGCATGGGCTTTGGTTTGCTTaGTTTGTTTTATCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: LFISLVCLSTLPTRNQLHGLWFA*FVLSPV
Trigger: CACTGGAGATAAAACAAACAAAGCAAACCAAAGCCC...ATGCAGCTGATTTCTAGTGGGGAGAGTAGACAAGCAGACAAGAGAAATAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS CCA 72 bp GGTAGCGGTAGCCCTCCGCTAGGGCGGGTGGGAAGCTaGAGTCGGCCCCAGGTTGGGCGGGCCCCAGGCGGT +
Preference number: 6 (lower is better)
Translates to: GSGSPPLGRVGS*SRPQVGRAPGG
Trigger: ACCGCCTGGGGCCCGCCCAACCTGGGGCCGACTCCAGCTTCCCACCCGCCCTAGCGGAGGGCTACCGCTACC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000553607.1
ENST00000567664.5
ENST00000627355.2
CDS GCA 72 bp GGGGTGAATGTAGACACGGTCAGGCAGGCGGGGCTCTaGCTTGCCGCTGGGCTCCCAGCGCCGGCCCTGCCA +
Preference number: 6 (lower is better)
Translates to: GVNVDTVRQAGL*LAAGLPAPALP
Trigger: TGGCAGGGCCGGCGCTGGGAGCCCAGCGGCAAGGCAGAGCCCCGCCTGCCTGACCGTGTCTACATTCACCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000553607.1
ENST00000567664.5
ENST00000627355.2
CDS TCA 72 bp TCGCTGCTTAGGGCCCCCGGTGAGTCCGACAGCTTCTaGCGCCTCGCGCCAGGGTTTCCCGAAGGTCCCGCG +
Preference number: 6 (lower is better)
Translates to: SLLRAPGESDSF*RLAPGFPEGPA
Trigger: CGCGGGACCTTCGGGAAACCCTGGCGCGAGGCGTCAGAAGCTGTCGGACTCACCGGGGGCCCTAAGCAGCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395224.7
CDS TCA 72 bp GAGGGAAAGTGCAGGCTAGAGGGACGCGGCCTGAGCTaGTTTCACAGGGCACTCGGGGCCGCGAGGAGGCCG +
Preference number: 6 (lower is better)
Translates to: EGKCRLEGRGLS*FHRALGAARRP
Trigger: CGGCCTCCTCGCGGCCCCGAGTGCCCTGTGAAATCAGCTCAGGCCGCGTCCCTCTAGCCTGCACTTTCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS CAA 72 bp GGAACCTGGACGGAGCCAAGAGTCCCGGGACACACCTaGGCGCCCCAGACCTTCTGGCAGGTGACCGCCCTC +
Preference number: 6 (lower is better)
Translates to: GTWTEPRVPGHT*APQTFWQVTAL
Trigger: GAGGGCGGTCACCTGCCAGAAGGTCTGGGGCGCCAAGGTGTGTCCCGGGACTCTTGGCTCCGTCCAGGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS TCA 72 bp ACTCCTTCCATAGCTCCCGGTTCTCCAGGCTCAGGCTaGCCCCCGGGAGGGAATGGAGGGCCTCTGGAGCTG +
Preference number: 6 (lower is better)
Translates to: TPSIAPGSPGSG*PPGGNGGPLEL
Trigger: CAGCTCCAGAGGCCCTCCATTCCCTCCCGGGGGTCAGCCTGAGCCTGGAGAACCGGGAGCTATGGAAGGAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000553607.1
ENST00000567664.5
ENST00000627355.2
CDS GCA 72 bp GCTGCCCGAACTAGGTGTATGCGGGGTTGGTACTTGTaGATGGAGTGCAGGATCAGGTGGCCGTGGGGGTCC +
Preference number: 6 (lower is better)
Translates to: AARTRCMRGWYL*MECRIRWPWGS
Trigger: GGACCCCCACGGCCACCTGATCCTGCACTCCATGCACAAGTACCAACCCCGCATACACCTAGTTCGGGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000553607.1
ENST00000567664.5
ENST00000627355.2
CDS GCA 72 bp GTACATGTTGTAGTTCCGTCTGGCCTCAGGTCTCGCTaGTTAGGGCCCCCGGTGCTGCGAGATGCCCCCTTT +
Preference number: 6 (lower is better)
Translates to: VHVVVPSGLRSR*LGPPVLRDAPF
Trigger: AAAGGGGGCATCTCGCAGCACCGGGGGCCCTAAGCAGCGAGACCTGAGGCCAGACGGAACTACAACATGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000553607.1
CDS CCA 72 bp GCGGTAGCCGGCCCCCAGGGACGGGTACAATTCTCGTaGATGGTACATGTTGTAGTTCCGTCTGGCCTCAGG +
Preference number: 6 (lower is better)
Translates to: AVAGPQGRVQFS*MVHVVVPSGLR
Trigger: CCTGAGGCCAGACGGAACTACAACATGTACCATCCACGAGAATTGTACCCGTCCCTGGGGGCCGGCTACCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000553607.1
ENST00000627355.2
CDS CAA 72 bp TGCAGGATCAGGTGGCCGTGGGGGTCCAGCGTGCTGTaGGTGAGCTTGACACGATGGAAAGACACAGGCTGC +
Preference number: 6 (lower is better)
Translates to: CRIRWPWGSSVL*VSLTRWKDTGC
Trigger: GCAGCCTGTGTCTTTCCATCGTGTCAAGCTCACCAACAGCACGCTGGACCCCCACGGCCACCTGATCCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000553607.1
ENST00000567664.5
ENST00000627355.2
CDS GCA 72 bp GTACATGTTGTAGTTCCGTCTGGCCTCAGGTCTCGCTaGTTAGGGCCCCCGGTGAGTCCGACAGCTTCTGAC +
Preference number: 6 (lower is better)
Translates to: VHVVVPSGLRSR*LGPPVSPTASD
Trigger: GTCAGAAGCTGTCGGACTCACCGGGGGCCCTAAGCAGCGAGACCTGAGGCCAGACGGAACTACAACATGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395224.7
CDS CCA 72 bp GTTCTGGATCTGATTCACGAATGTCTCCACCCAGGGTaGAGTCGCAGGGACCACCTGGTGTGTCTCCGCTCC +
Preference number: 6 (lower is better)
Translates to: VLDLIHECLHPG*SRRDHLVCLRS
Trigger: GGAGCGGAGACACACCAGGTGGTCCCTGCGACTCCACCCTGGGTGGAGACATTCGTGAATCAGATCCAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000395224.7
ENST00000627355.2
CDS CCA 72 bp ACAATTCTCGTGGATGGTACATGTTGTAGTTCCGTCTaGCCTCAGGTCTCGCTGCTTAGGGCCCCCGGTGCT +
Preference number: 6 (lower is better)
Translates to: TILVDGTCCSSV*PQVSLLRAPGA
Trigger: AGCACCGGGGGCCCTAAGCAGCGAGACCTGAGGCCAGACGGAACTACAACATGTACCATCCACGAGAATTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279386.6
ENST00000553607.1
ENST00000627355.2
CDS CCA 72 bp ACAATTCTCGTGGATGGTACATGTTGTAGTTCCGTCTaGCCTCAGGTCTCGCTGCTTAGGGCCCCCGGTGAG +
Preference number: 6 (lower is better)
Translates to: TILVDGTCCSSV*PQVSLLRAPGE
Trigger: CTCACCGGGGGCCCTAAGCAGCGAGACCTGAGGCCAGACGGAACTACAACATGTACCATCCACGAGAATTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395224.7