RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBX5 (Homo sapiens)

Ensembl gene IDs: ENSG00000089225

Ensembl transcript IDs: ENST00000310346.8, ENST00000349716.9, ENST00000405440.7, ENST00000526441.1, ENST00000552726.1

Found 524 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCAGCATCCAGCGACCTTGAGTGCAGATGTGAACATTGGGTGAAATaGAAAATCTTGTCCGTGGGGTTCTCTTGGCTACTGTCTCTCTCC +
Preference number: 1 (lower is better)
Translates to: SASSDLECRCEHWVK*KILSVGFSWLLSLS
Trigger: GGAGAGAGACAGTAGCCAAGAGAACCCCACGGACAAGATTTTTCATTTCACCCAATGTTCACATCTGCACTCAAGGTCGCTGGATGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR TCA 90 bp TTAGATCAGCATCCAGCGACCTTGAGTGCAGATGTGAACATTGGGTaGAATGAAAAATCTTGTCCGTGGGGTTCTCTTGGCTACTGTCTC +
Preference number: 1 (lower is better)
Translates to: LDQHPATLSADVNIG*NEKSCPWGSLGYCL
Trigger: GAGACAGTAGCCAAGAGAACCCCACGGACAAGATTTTTCATTTCACCCAATGTTCACATCTGCACTCAAGGTCGCTGGATGCTGATCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR CCA 90 bp TCGGCTTTCAGTAAACACAGTTTTGTGTTGGCATTGGTGTGGGCGTaGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCCTCTT +
Preference number: 1 (lower is better)
Translates to: SAFSKHSFVLALVWA*FLWRDIIGDCVLPL
Trigger: AAGAGGCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATGCCAACACAAAACTGTGTTTACTGAAAGCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR GCA 90 bp TGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTaGCTCTTCTGTAGGAATTGTGCATTTTGCTTGACATCCAGTTTG +
Preference number: 1 (lower is better)
Translates to: CGRGFFGEISLVTVS*LFCRNCAFCLTSSL
Trigger: CAAACTGGATGTCAAGCAAAATGCACAATTCCTACAGAAGAGGCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR CCA 90 bp CTGTTTTCGGCTTTCAGTAAACACAGTTTTGTGTTGGCATTGGTGTaGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTG +
Preference number: 1 (lower is better)
Translates to: LFSAFSKHSFVLALV*AWFLWRDIIGDCVL
Trigger: CAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATGCCAACACAAAACTGTGTTTACTGAAAGCCGAAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR TCA 90 bp GTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCGTGGTTTCAAGCTACTaGTTAGATCAGCATCCAGCG +
Preference number: 2 (lower is better)
Translates to: VNTELALLSQSCLHVNGGVVSSY*LDQHPA
Trigger: CGCTGGATGCTGATCTAATCAGTAGCTTGAAACCAC...GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR GCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCCTGTTATCACAGTCCTaGCTACATGTAAACGGGGGC +
Preference number: 2 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCLLSQS*LHVNGG
Trigger: GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAG...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACTCCGTGGGGTTCTCTTaGCTACTGTCTCTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: FQSKLSGREAIGHVLATDSVGFS*LLSLSF
Trigger: GAAGGAGAGAGACAGTAGCCAAGAGAACCCCACGGA...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCCTGGAAAGACAGAGCTaGCAAGATGGTAGGGCTGAA +
Preference number: 2 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCLERQS*QDGRAE
Trigger: TTCAGCCCTACCATCTTGCCAGCTCTGTCTTTCCAG...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR TCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTATCTGGGGAGTAGCGTaGATGTGGCTGGTTGATGGG +
Preference number: 2 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPIWGVA*MWLVDG
Trigger: CCCATCAACCAGCCACATTCACGCTACTCCCCAGAT...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR GCA 90 bp GTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCCTGAATAAGATAGGATaGCAGGGAGCGTCAGTGTTA +
Preference number: 2 (lower is better)
Translates to: VNTELALLSQSCLHVNGGLNKIG*QGASVL
Trigger: TAACACTGACGCTCCCTGGCATCCTATCTTATTCAG...GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTTCCGTGGGGTTCTCTTaGCTACTGTCTCTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: FVHNSCQHRACTVITVLPSVGFS*LLSLSF
Trigger: GAAGGAGAGAGACAGTAGCCAAGAGAACCCCACGGA...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR TCA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTCAGGGATGGTTTACTTaGAGGGAATCCCGCAAGTAC +
Preference number: 2 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSQGWFT*RESRKY
Trigger: GTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTG...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR GCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTTCCAGCGACCTTGAGTaGAGATGTGAACATTGGGTG +
Preference number: 2 (lower is better)
Translates to: FVHNSCQHRACTVITVLPSSDLE*RCEHWV
Trigger: CACCCAATGTTCACATCTGCACTCAAGGTCGCTGGA...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR CAA 90 bp TTGTGTTGGCATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATaGGTGACTGTGTCTTGCCTCTTCTGTAGGAATTGTGCATTTTGC +
Preference number: 2 (lower is better)
Translates to: LCWHWCGRGFFGEIS*VTVSCLFCRNCAFC
Trigger: GCAAAATGCACAATTCCTACAGAAGAGGCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATGCCAACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR TCA 90 bp GTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCGATGTGAACATTGGGTaGAATGAAAAATCTTGTCCG +
Preference number: 2 (lower is better)
Translates to: VNTELALLSQSCLHVNGGDVNIG*NEKSCP
Trigger: CGGACAAGATTTTTCATTTCACCCAATGTTCACATC...GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR TCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTGTGGTTTCAAGCTACTaGTTAGATCAGCATCCAGCG +
Preference number: 2 (lower is better)
Translates to: FVHNSCQHRACTVITVLPVVSSY*LDQHPA
Trigger: CGCTGGATGCTGATCTAATCAGTAGCTTGAAACCAC...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR TCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATATCTGGGGAGTAGCGTaGATGTGGCTGGTTGATGGG +
Preference number: 2 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYIWGVA*MWLVDG
Trigger: CCCATCAACCAGCCACATTCACGCTACTCCCCAGAT...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCCCCCAAATAAGGGACTaGGTCCCATTAAGAAAATTG +
Preference number: 2 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCPQIRD*VPLRKL
Trigger: CAATTTTCTTAATGGGACCCAGTCCCTTATTTGGGG...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCGTTATCCTGACTCCATaGGTAAGTAGAGGCAAAACT +
Preference number: 2 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCVILTP*VSRGKT
Trigger: AGTTTTGCCTCTACTTACCCATGGAGTCAGGATAAC...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CCA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTTGGGCGTGGTTTCTTTaGCGAGATATCATTGGTGAC +
Preference number: 2 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSWAWFL*RDIIGD
Trigger: GTCACCAATGATATCTCGCCAAAGAAACCACGCCCA...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CCA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTAACACAGTTTTGTGTTaGCATTGGTGTGGGCGTGGT +
Preference number: 2 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSNTVLC*HWCGRG
Trigger: ACCACGCCCACACCAATGCCAACACAAAACTGTGTT...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTGAAAAATCTTGTCCGTaGGGTTCTCTTGGCTACTGT +
Preference number: 2 (lower is better)
Translates to: FVHNSCQHRACTVITVLPEKSCP*GSLGYC
Trigger: ACAGTAGCCAAGAGAACCCCACGGACAAGATTTTTC...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CCA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTGAAAAATCTTGTCCGTaGGGTTCTCTTGGCTACTGT +
Preference number: 2 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSEKSCP*GSLGYC
Trigger: ACAGTAGCCAAGAGAACCCCACGGACAAGATTTTTC...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CCA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTCAAAACCAAAGCAAATaGGGACATACAGAGGCTTTT +
Preference number: 2 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGQNQSK*GHTEAF
Trigger: AAAAGCCTCTGTATGTCCCCATTTGCTTTGGTTTTG...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR TCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCTGGGGAGTAGCGTaGATGTGGCTGGTTGATGGG +
Preference number: 2 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVIWGVA*MWLVDG
Trigger: CCCATCAACCAGCCACATTCACGCTACTCCCCAGAT...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CCA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTCCCCAAATAAGGGACTaGGTCCCATTAAGAAAATTG +
Preference number: 2 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSPQIRD*VPLRKL
Trigger: CAATTTTCTTAATGGGACCCAGTCCCTTATTTGGGG...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CCA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTGTTATCCTGACTCCATaGGTAAGTAGAGGCAAAACT +
Preference number: 2 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSVILTP*VSRGKT
Trigger: AGTTTTGCCTCTACTTACCCATGGAGTCAGGATAAC...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CCA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTAAAATTAAAAGCTCTTaGCCAGCTCCTATGCTGGGT +
Preference number: 2 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSKIKSS*PAPMLG
Trigger: ACCCAGCATAGGAGCTGGCCAAGAGCTTTTAATTTT...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR TCA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTGATGTGAACATTGGGTaGAATGAAAAATCTTGTCCG +
Preference number: 2 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSDVNIG*NEKSCP
Trigger: CGGACAAGATTTTTCATTTCACCCAATGTTCACATC...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR GCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAATCCAGCGACCTTGAGTaGAGATGTGAACATTGGGTG +
Preference number: 2 (lower is better)
Translates to: THSASHLTLFSLLGSVYKSSDLE*RCEHWV
Trigger: CACCCAATGTTCACATCTGCACTCAAGGTCGCTGGA...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR GCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAACTGTTATCACAGTCCTaGCTACATGTAAACGGGGGC +
Preference number: 2 (lower is better)
Translates to: THSASHLTLFSLLGSVYKLLSQS*LHVNGG
Trigger: GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAG...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CCA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTCAAAACCAAAGCAAATaGGGACATACAGAGGCTTTT +
Preference number: 2 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSQNQSK*GHTEAF
Trigger: AAAAGCCTCTGTATGTCCCCATTTGCTTTGGTTTTG...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGTTATCCTGACTCCATaGGTAAGTAGAGGCAAAACT +
Preference number: 2 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPVILTP*VSRGKT
Trigger: AGTTTTGCCTCTACTTACCCATGGAGTCAGGATAAC...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAAGCATTGGTGTGGGCGTaGTTTCTTTGGCGAGATATC +
Preference number: 2 (lower is better)
Translates to: THSASHLTLFSLLGSVYKALVWA*FLWRDI
Trigger: GATATCTCGCCAAAGAAACCACGCCCACACCAATGC...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR CAA 90 bp TTAATACTGTTTTCGGCTTTCAGTAAACACAGTTTTGTGTTGGCATaGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGT +
Preference number: 2 (lower is better)
Translates to: LILFSAFSKHSFVLA*VWAWFLWRDIIGDC
Trigger: ACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATGCCAACACAAAACTGTGTTTACTGAAAGCCGAAAACAGTATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR TCA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTCGCAAGTACATATTTTaGAATATACTTGCCTCAGAC +
Preference number: 2 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSRKYIF*NILASD
Trigger: GTCTGAGGCAAGTATATTTCAAAATATGTACTTGCG...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR TCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTCAGGGATGGTTTACTTaGAGGGAATCCCGCAAGTAC +
Preference number: 2 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVQGWFT*RESRKY
Trigger: GTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTG...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR GCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAATGTCAACACAGAGCTTaGACTGTTATCACAGTCCTG +
Preference number: 2 (lower is better)
Translates to: THSASHLTLFSLLGSVYKCQHRA*TVITVL
Trigger: CAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACA...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAAGAAAAATCTTGTCCGTaGGGTTCTCTTGGCTACTGT +
Preference number: 2 (lower is better)
Translates to: THSASHLTLFSLLGSVYKEKSCP*GSLGYC
Trigger: ACAGTAGCCAAGAGAACCCCACGGACAAGATTTTTC...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAACCCCAAATAAGGGACTaGGTCCCATTAAGAAAATTG +
Preference number: 2 (lower is better)
Translates to: THSASHLTLFSLLGSVYKPQIRD*VPLRKL
Trigger: CAATTTTCTTAATGGGACCCAGTCCCTTATTTGGGG...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR TCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTGATGTGAACATTGGGTaGAATGAAAAATCTTGTCCG +
Preference number: 2 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVDVNIG*NEKSCP
Trigger: CGGACAAGATTTTTCATTTCACCCAATGTTCACATC...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CAA 90 bp GTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCGTCCGTGGGGTTCTCTaGGCTACTGTCTCTCTCCTT +
Preference number: 3 (lower is better)
Translates to: VNTELALLSQSCLHVNGGVRGVL*ATVSLL
Trigger: AAGGAGAGAGACAGTAGCCAAGAGAACCCCACGGAC...GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CAA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGGTCCGTGGGGTTCTCTaGGCTACTGTCTCTCTCCTT +
Preference number: 3 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRVRGVL*ATVSLL
Trigger: AAGGAGAGAGACAGTAGCCAAGAGAACCCCACGGAC...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CAA 90 bp GTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCCAGCATCCAGCGACCTaGAGTGCAGATGTGAACATT +
Preference number: 3 (lower is better)
Translates to: VNTELALLSQSCLHVNGGQHPAT*SADVNI
Trigger: AATGTTCACATCTGCACTCAAGGTCGCTGGATGCTG...GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR CCA 72 bp AGGATGCCAGGGAGCGTCAGTGTTATCCTGACTCCATaGGTAAGTAGAGGCAAAACTGAGCACGTGATATTG +
Preference number: 3 (lower is better)
Translates to: RMPGSVSVILTP*VSRGKTEHVIL
Trigger: CAATATCACGTGCTCAGTTTTGCCTCTACTTACCCATGGAGTCAGGATAACACTGACGCTCCCTGGCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CAA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGTCCGTGGGGTTCTCTaGGCTACTGTCTCTCTCCTT +
Preference number: 3 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPVRGVL*ATVSLL
Trigger: AAGGAGAGAGACAGTAGCCAAGAGAACCCCACGGAC...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CAA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCACTGAGCACGTGATATaGGAGAAGGCAGGACAAAAC +
Preference number: 3 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCTEHVI*EKAGQN
Trigger: GTTTTGTCCTGCCTTCTCCAATATCACGTGCTCAGT...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR TCA 72 bp GGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTaGCTGTGTCTTGCCTCTTCTGTAGGAATTGTGCAT +
Preference number: 3 (lower is better)
Translates to: GVGVVSLARYHW*LCLASSVGIVH
Trigger: ATGCACAATTCCTACAGAAGAGGCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CAA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACACTGAGCACGTGATATaGGAGAAGGCAGGACAAAAC +
Preference number: 3 (lower is better)
Translates to: FQSKLSGREAIGHVLATDTEHVI*EKAGQN
Trigger: GTTTTGTCCTGCCTTCTCCAATATCACGTGCTCAGT...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CAA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTTCAGGGATGGTTTACTaGAAGGGAATCCCGCAAGTA +
Preference number: 3 (lower is better)
Translates to: FVHNSCQHRACTVITVLPSGMVY*KGIPQV
Trigger: TACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGA...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CAA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTATCCAGTTTGGGTTGTaGGTGATGGAGGTTTGGAAG +
Preference number: 3 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSIQFGL*VMEVWK
Trigger: CTTCCAAACCTCCATCACCAACAACCCAAACTGGAT...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CAA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTTTTGGCGAGATATCATaGGTGACTGTGTCTTGCCTC +
Preference number: 3 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSFGEIS*VTVSCL
Trigger: GAGGCAAGACACAGTCACCAATGATATCTCGCCAAA...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CAA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTACTGAGCACGTGATATaGGAGAAGGCAGGACAAAAC +
Preference number: 3 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPTEHVI*EKAGQN
Trigger: GTTTTGTCCTGCCTTCTCCAATATCACGTGCTCAGT...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR CCA 72 bp AGTAAACACAGTTTTGTGTTGGCATTGGTGTGGGCGTaGTTTCTTTGGCGAGATATCATTGGTGACTGTGTC +
Preference number: 3 (lower is better)
Translates to: SKHSFVLALVWA*FLWRDIIGDCV
Trigger: GACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATGCCAACACAAAACTGTGTTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR CCA 72 bp GCTTTCAGTAAACACAGTTTTGTGTTGGCATTGGTGTaGGCGTGGTTTCTTTGGCGAGATATCATTGGTGAC +
Preference number: 3 (lower is better)
Translates to: AFSKHSFVLALV*AWFLWRDIIGD
Trigger: GTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATGCCAACACAAAACTGTGTTTACTGAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR CCA 72 bp TACTGTTTTCGGCTTTCAGTAAACACAGTTTTGTGTTaGCATTGGTGTGGGCGTGGTTTCTTTGGCGAGATA +
Preference number: 3 (lower is better)
Translates to: YCFRLSVNTVLC*HWCGRGFFGEI
Trigger: TATCTCGCCAAAGAAACCACGCCCACACCAATGCCAACACAAAACTGTGTTTACTGAAAGCCGAAAACAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CAA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAAAAACACAGTTTTGTGTaGGCATTGGTGTGGGCGTGG +
Preference number: 3 (lower is better)
Translates to: THSASHLTLFSLLGSVYKKHSFV*ALVWAW
Trigger: CCACGCCCACACCAATGCCAACACAAAACTGTGTTT...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CAA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTCAGCATCCAGCGACCTaGAGTGCAGATGTGAACATT +
Preference number: 3 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVQHPAT*SADVNI
Trigger: AATGTTCACATCTGCACTCAAGGTCGCTGGATGCTG...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CAA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTCCGCAAGTACATATTTaGAAATATACTTGCCTCAGA +
Preference number: 3 (lower is better)
Translates to: FVHNSCQHRACTVITVLPPQVHI*KYTCLR
Trigger: TCTGAGGCAAGTATATTTCAAAATATGTACTTGCGG...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CAA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTCCGCAAGTACATATTTaGAAATATACTTGCCTCAGA +
Preference number: 3 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPPQVHI*KYTCLR
Trigger: TCTGAGGCAAGTATATTTCAAAATATGTACTTGCGG...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CAA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTTCAGGGATGGTTTACTaGAAGGGAATCCCGCAAGTA +
Preference number: 3 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVSGMVY*KGIPQV
Trigger: TACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGA...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR-3UTR CAA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAATTTTGTCCACAACTCTaGTCAACACAGAGCTTGCAC +
Preference number: 3 (lower is better)
Translates to: THSASHLTLFSLLGSVYKFCPQL*STQSLH
Trigger: GTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAA...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp GTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCGCGCCCAGGGCCCTGTaGCCGCGCAAGGTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: VNTELALLSQSCLHVNGGAPRAL*PRKVLL
Trigger: GAGCAGAACCTTGCGCGGGCACAGGGCCCTGGGCGC...GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000405440.7
CDS-3UTR TCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACCAGGGAAGCCGGCGGTaGGGCGGGGGAGCAGGCATG +
Preference number: 4 (lower is better)
Translates to: FQSKLSGREAIGHVLATDQGSRR*GGGAGM
Trigger: CATGCCTGCTCCCCCGCCTCACCGCCGGCTTCCCTG...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS-3UTR GCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCCTGCGTCGGCCATGGTaGGCCCAGGGCCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFLRRPW*AQGPVP
Trigger: GGGCACAGGGCCCTGGGCGCACCATGGCCGACGCAG...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000405440.7
CDS-3UTR CCA 90 bp GTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCGCTGTCACGTTTGGCTaGGGGGCAGCGGCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: VNTELALLSQSCLHVNGGAVTFG*GAAAGG
Trigger: ACCTCCCGCCGCTGCCCCCCAGCCAAACGTGACAGC...GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS-3UTR CCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCCCCTCCATGCCCTGCTaGGTGAAGGCGGCCTGCGGG +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCPSMPC*VKAACG
Trigger: CCCGCAGGCCGCCTTCACCCAGCAGGGCATGGAGGG...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000405440.7
CDS-3UTR CCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACGGGCGCACCTACCGCTaGAGCCTCCGCGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: FQSKLSGREAIGHVLATDGRTYR*SLRGDC
Trigger: GCAGTCGCCGCGGAGGCTCCAGCGGTAGGTGCGCCC...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS-3UTR TCA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGGAGGCCCACACTGCCTaGCCACAGGCTGGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: HQDRDRLQLRTREKHSMREAHTA*PQAGGP
Trigger: TGGCCCACCAGCCTGTGGTCAGGCAGTGTGGGCCTC...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCGCCAAAGCCCTCGTCTaGGTCGGCCATGGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCAKALV*VGHGAP
Trigger: GGGCGCACCATGGCCGACGCAGACGAGGGCTTTGGC...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000405440.7
CDS-3UTR GCA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGTGGGTGAAGGCGGCCTaGGGGGACGACGGGGACTTG +
Preference number: 4 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRWVKAA*GDDGDL
Trigger: CAAGTCCCCGTCGTCCCCGCAGGCCGCCTTCACCCA...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000405440.7
CDS-3UTR CCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCCGTCTGCGTCGGCCATaGTGCGCCCAGGGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFRLRRP*CAQGPV
Trigger: CACAGGGCCCTGGGCGCACCATGGCCGACGCAGACG...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000405440.7
CDS-3UTR TCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCTGGGCTGCACGGTGGTaGCGGTGCAGCTGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCWAARW*RCSCCR
Trigger: CCTACAGCAGCTGCACCGTCACCACCGTGCAGCCCA...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACGAGGCCCACACTGCCTaGCCACAGGCTGGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: FQSKLSGREAIGHVLATDEAHTA*PQAGGP
Trigger: TGGCCCACCAGCCTGTGGTCAGGCAGTGTGGGCCTC...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGGACTGCAGGCCAGTCTaGGGCCCACACTGCCTGACC +
Preference number: 4 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRDCRPV*GPHCLT
Trigger: GGTCAGGCAGTGTGGGCCTCAGACTGGCCTGCAGTC...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTAGGAACTCAGGGGGCTaGAGGGTGCCAGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGRNSGG*RVPGDC
Trigger: GCAGTCCCCTGGCACCCTTCAGCCCCCTGAGTTCCT...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGAGGAACTCAGGGGGCTaGAGGGTGCCAGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRRNSGG*RVPGDC
Trigger: GCAGTCCCCTGGCACCCTTCAGCCCCCTGAGTTCCT...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTGCGCCCAGGGCCCTGTaGCCGCGCAAGGTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSAPRAL*PRKVLL
Trigger: GAGCAGAACCTTGCGCGGGCACAGGGCCCTGGGCGC...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000405440.7
CDS-3UTR CCA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTCGTCTGCGTCGGCCATaGTGCGCCCAGGGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSRLRRP*CAQGPV
Trigger: CACAGGGCCCTGGGCGCACCATGGCCGACGCAGACG...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000405440.7
CDS-3UTR CCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACACAGGCGGCCAGGCATaGCGGGCTCAGCTTTGCCCG +
Preference number: 4 (lower is better)
Translates to: FQSKLSGREAIGHVLATDTGGQA*RAQLCP
Trigger: CGGGCAAAGCTGAGCCCGCCATGCCTGGCCGCCTGT...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCTGGGCACAGGCTCGCTaGGGGGCGCAGAGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFWAQAR*GAQSWH
Trigger: ATGCCAGCTCTGCGCCCCCCAGCGAGCCTGTGCCCA...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACTGGGCACAGGCTCGCTaGGGGGCGCAGAGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: FQSKLSGREAIGHVLATDWAQAR*GAQSWH
Trigger: ATGCCAGCTCTGCGCCCCCCAGCGAGCCTGTGCCCA...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCTGCCTGACCACAGGCTaGTGGGCCACGGAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCCLTTG*WATEVW
Trigger: CCAGACCTCCGTGGCCCACCAGCCTGTGGTCAGGCA...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGGCGGGGGAGCAGGCATaGTGGCTCCGGGGTTTATGC +
Preference number: 4 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRAGEQA*WLRGLC
Trigger: GCATAAACCCCGGAGCCACCATGCCTGCTCCCCCGC...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS-3UTR TCA 90 bp GTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCGCCACGTGTTGCAGCTaGTGTCCTCTAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: VNTELALLSQSCLHVNGGATCCS*CPLGWA
Trigger: TGCCCAGCCTAGAGGACATCAGCTGCAACACGTGGC...GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTTGGGTGAAGGCGGCCTaGGGGGACGACGGGGACTTG +
Preference number: 4 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSWVKAA*GDDGDL
Trigger: CAAGTCCCCGTCGTCCCCGCAGGCCGCCTTCACCCA...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000405440.7
CDS-3UTR GCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCAGCCTGTCCATGGGCTaGACGGTGGTGACGGTGCAG +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCSLSMG*TVVTVQ
Trigger: CTGCACCGTCACCACCGTGCAGCCCATGGACAGGCT...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTAGCCTGTCCATGGGCTaGACGGTGGTGACGGTGCAG +
Preference number: 4 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGSLSMG*TVVTVQ
Trigger: CTGCACCGTCACCACCGTGCAGCCCATGGACAGGCT...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTAGCCATGGTTGGCCATaGCAGCCAGCCGAGGGACCA +
Preference number: 4 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGSHGWP*QPAEGP
Trigger: TGGTCCCTCGGCTGGCTGGCATGGCCAACCATGGCT...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTGCTGTCACGTTTGGCTaGGGGGCAGCGGCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: FVHNSCQHRACTVITVLPAVTFG*GAAAGG
Trigger: ACCTCCCGCCGCTGCCCCCCAGCCAAACGTGACAGC...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS-3UTR CCA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTTCCAATGCGCCCCGGTaGCGGGGGAGTCTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSSNAPR*RGSLGA
Trigger: TGCACCCAGACTCCCCCGCCACCGGGGCGCATTGGA...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTTGGGCACAGGCTCGCTaGGGGGCGCAGAGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: FVHNSCQHRACTVITVLPWAQAR*GAQSWH
Trigger: ATGCCAGCTCTGCGCCCCCCAGCGAGCCTGTGCCCA...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACCTGACCACAGGCTGGTaGGCCACGGAGGTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: FQSKLSGREAIGHVLATDLTTGW*ATEVWC
Trigger: GCACCAGACCTCCGTGGCCCACCAGCCTGTGGTCAG...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCCTGACCACAGGCTGGTaGGCCACGGAGGTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFLTTGW*ATEVWC
Trigger: GCACCAGACCTCCGTGGCCCACCAGCCTGTGGTCAG...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp GTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCCTCGAGACTCGCTGCTaGAAGGACTGTGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: VNTELALLSQSCLHVNGGLETRC*KDCGWR
Trigger: CCTCCAACCACAGTCCTTTCAGCAGCGAGTCTCGAG...GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGGCCACGTGTTGCAGCTaGTGTCCTCTAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRATCCS*CPLGWA
Trigger: TGCCCAGCCTAGAGGACATCAGCTGCAACACGTGGC...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTTGGGCTGCACGGTGGTaGCGGTGCAGCTGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: FVHNSCQHRACTVITVLPWAARW*RCSCCR
Trigger: CCTACAGCAGCTGCACCGTCACCACCGTGCAGCCCA...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTGACTGCAGGCCAGTCTaGGGCCCACACTGCCTGACC +
Preference number: 4 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSDCRPV*GPHCLT
Trigger: GGTCAGGCAGTGTGGGCCTCAGACTGGCCTGCAGTC...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCTGGAAGGAGACGAGCTaGCTCATCCAATGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCWKETS*LIQCAP
Trigger: CGGGGCGCATTGGATGAGGCAGCTCGTCTCCTTCCA...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGTGGAAGGAGACGAGCTaGCTCATCCAATGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRWKETS*LIQCAP
Trigger: CGGGGCGCATTGGATGAGGCAGCTCGTCTCCTTCCA...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp GTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCGCAAGCTTGCCGCTGTaGCGACTCTGTCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: VNTELALLSQSCLHVNGGASLPL*RLCPVG
Trigger: TCCTACAGGACAGAGTCGGCACAGCGGCAAGCTTGC...GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCAGCCTGTCCATGGGCTaGACGGTGGTGACGGTGCAG +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFSLSMG*TVVTVQ
Trigger: CTGCACCGTCACCACCGTGCAGCCCATGGACAGGCT...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTGCCACGGAGGTCTGGTaGTGGAACATTCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGATEVW*WNIPSP
Trigger: GGGAGAGGGAATGTTCCAGCACCAGACCTCCGTGGC...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCGCCACGGAGGTCTGGTaGTGGAACATTCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCATEVW*WNIPSP
Trigger: GGGAGAGGGAATGTTCCAGCACCAGACCTCCGTGGC...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTACAGGCGGCCAGGCATaGCGGGCTCAGCTTTGCCCG +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPTGGQA*RAQLCP
Trigger: CGGGCAAAGCTGAGCCCGCCATGCCTGGCCGCCTGT...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTTCCAATGCGCCCCGGTaGCGGGGGAGTCTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPSNAPR*RGSLGA
Trigger: TGCACCCAGACTCCCCCGCCACCGGGGCGCATTGGA...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCATGCTCCTGGGGCAGTaGGTATGGGTTGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCMLLGQ*VWVGWR
Trigger: CCTCCACCCAACCCATACCCACTGCCCCAGGAGCAT...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTGTGGGGAGCCATGGTTaGCCATGCCAGCCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSVGSHG*PCQPAE
Trigger: CTCGGCTGGCTGGCATGGCCAACCATGGCTCCCCAC...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTCTGACCACAGGCTGGTaGGCCACGGAGGTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSLTTGW*ATEVWC
Trigger: GCACCAGACCTCCGTGGCCCACCAGCCTGTGGTCAG...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTCCAGGGGCCCCGAGGTaGAGTGAGCGGAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPPGAPR*SERRSA
Trigger: AGCACTTCTCCGCTCACTTCACCTCGGGGCCCCTGG...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTAGGAACTCAGGGGGCTaGAGGGTGCCAGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPRNSGG*RVPGDC
Trigger: GCAGTCCCCTGGCACCCTTCAGCCCCCTGAGTTCCT...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp GTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCATCTGGGGAGTAGCGTaGATGTGGCTGGTTGATGGG +
Preference number: 4 (lower is better)
Translates to: VNTELALLSQSCLHVNGGIWGVA*MWLVDG
Trigger: CCCATCAACCAGCCACATTCACGCTACTCCCCAGAT...GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCTCTGCTCTCGTTCGGTaGAGCCGGTGCATTCACCAC +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCSALVR*SRCIHH
Trigger: GTGGTGAATGCACCGGCTTCACCGAACGAGAGCAGA...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS-3UTR GCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACTATCAGTGCCGGGTCTaGGCAGCCACAGGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: FQSKLSGREAIGHVLATDYQCRV*AATGSG
Trigger: TCCGGAACCTGTGGCTGCGCAGACCCGGCACTGATA...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS-3UTR GCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCGTCTTCGCCTATCAGTaGCGGGTCTGCGCAGCCACA +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFVFAYQ*RVCAAT
Trigger: TGTGGCTGCGCAGACCCGGCACTGATAGGCGAAGAC...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS-3UTR GCA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGCTTTTTGCCTCACGGTaGTCCTGGGGACCACGGGAT +
Preference number: 4 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRLFASR*SWGPRD
Trigger: ATCCCGTGGTCCCCAGGAGCACCGTGAGGCAAAAAG...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCCTTTTTGCCTCACGGTaGTCCTGGGGACCACGGGAT +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCLFASR*SWGPRD
Trigger: ATCCCGTGGTCCCCAGGAGCACCGTGAGGCAAAAAG...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTCTTTTTGCCTCACGGTaGTCCTGGGGACCACGGGAT +
Preference number: 4 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGLFASR*SWGPRD
Trigger: ATCCCGTGGTCCCCAGGAGCACCGTGAGGCAAAAAG...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGTTGGAGGCCACTTTTTaGCTCACGGTGCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRLEATF*LTVLLG
Trigger: CCCCAGGAGCACCGTGAGGCAAAAAGTGGCCTCCAA...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCCAGAGCTGGCATACATaGAAGCTTGCCGCTGTGCCG +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCQSWHT*KLAAVP
Trigger: CGGCACAGCGGCAAGCTTGCATGTATGCCAGCTCTG...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTAGCCATGGTTGGCCATaGCAGCCAGCCGAGGGACCA +
Preference number: 4 (lower is better)
Translates to: FVHNSCQHRACTVITVLPSHGWP*QPAEGP
Trigger: TGGTCCCTCGGCTGGCTGGCATGGCCAACCATGGCT...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCGCCACGGAGGTCTGGTaGTGGAACATTCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFATEVW*WNIPSP
Trigger: GGGAGAGGGAATGTTCCAGCACCAGACCTCCGTGGC...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGCTTCACGAAGGGAGGTaGGAGTCCACCTCAGACCTC +
Preference number: 4 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRLHEGR*ESTSDL
Trigger: GAGGTCTGAGGTGGACTCCCACCTCCCTTCGTGAAG...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS-3UTR CCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCGCCTCACGGTGCTCCTaGGGACCACGGGATATTCTT +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCASRCS*GPRDIL
Trigger: AAGAATATCCCGTGGTCCCCAGGAGCACCGTGAGGC...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTGCCTCACGGTGCTCCTaGGGACCACGGGATATTCTT +
Preference number: 4 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGASRCS*GPRDIL
Trigger: AAGAATATCCCGTGGTCCCCAGGAGCACCGTGAGGC...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCATGCTCCTGGGGCAGTaGGTATGGGTTGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFMLLGQ*VWVGWR
Trigger: CCTCCACCCAACCCATACCCACTGCCCCAGGAGCAT...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGTGGGGAGCCATGGTTaGCCATGCCAGCCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPVGSHG*PCQPAE
Trigger: CTCGGCTGGCTGGCATGGCCAACCATGGCTCCCCAC...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACTCCCTCTCCCAGCTGTaGGGAGCCATGGTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: FQSKLSGREAIGHVLATDSLSQL*GAMVGH
Trigger: ATGGCCAACCATGGCTCCCCACAGCTGGGAGAGGGA...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGACGGAGGTCTGGTGCTaGAACATTCCCTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRTEVWC*NIPSPS
Trigger: GCTGGGAGAGGGAATGTTCCAGCACCAGACCTCCGT...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCGGACCCCAAATTGGATaGGGTGGAGAGAGCTCGAGA +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCGPQIG*GGESSR
Trigger: TCTCGAGCTCTCTCCACCTCATCCAATTTGGGGTCC...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTGTCTTCGCCTATCAGTaGCGGGTCTGCGCAGCCACA +
Preference number: 4 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSVFAYQ*RVCAAT
Trigger: TGTGGCTGCGCAGACCCGGCACTGATAGGCGAAGAC...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS-3UTR GCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATGGCTCCAGAGGCGTGTaGGCCAGGCCAAAGCCCTCG +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYGSRGV*ARPKPS
Trigger: CGAGGGCTTTGGCCTGGCGCACACGCCTCTGGAGCC...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000405440.7
CDS-3UTR GCA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTGCAGGGCAGGTCTTTTaGGTCAGGCTCCAGAGGCGT +
Preference number: 4 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSAGQVF*VRLQRR
Trigger: ACGCCTCTGGAGCCTGACGCAAAAGACCTGCCCTGC...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000405440.7
CDS-3UTR GCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACTTGGAGGCCACTTTTTaGCTCACGGTGCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: FQSKLSGREAIGHVLATDLEATF*LTVLLG
Trigger: CCCCAGGAGCACCGTGAGGCAAAAAGTGGCCTCCAA...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCGCATACATGCAAGCTTaGCGCTGTGCCGACTCTGTC +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCAYMQA*RCADSV
Trigger: GACAGAGTCGGCACAGCGGCAAGCTTGCATGTATGC...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTAGCCATGGTTGGCCATaGCAGCCAGCCGAGGGACCA +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPSHGWP*QPAEGP
Trigger: TGGTCCCTCGGCTGGCTGGCATGGCCAACCATGGCT...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGTCCACTCTGGCACCATaGCAACTCCGTGCACAGAGT +
Preference number: 4 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRSTLAP*QLRAQS
Trigger: ACTCTGTGCACGGAGTTGGCATGGTGCCAGAGTGGA...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAACCCTCCATGCCCTGCTaGGTGAAGGCGGCCTGCGGG +
Preference number: 4 (lower is better)
Translates to: THSASHLTLFSLLGSVYKPSMPC*VKAACG
Trigger: CCCGCAGGCCGCCTTCACCCAGCAGGGCATGGAGGG...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000405440.7
CDS-3UTR CCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTTCCCTCTCCCAGCTGTaGGGAGCCATGGTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: FVHNSCQHRACTVITVLPSLSQL*GAMVGH
Trigger: ATGGCCAACCATGGCTCCCCACAGCTGGGAGAGGGA...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGATTGTCGCTCCACTCTaGCACCATGCCAACTCCGTG +
Preference number: 4 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRIVAPL*HHANSV
Trigger: CACGGAGTTGGCATGGTGCCAGAGTGGAGCGACAAT...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCATTGTCGCTCCACTCTaGCACCATGCCAACTCCGTG +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCIVAPL*HHANSV
Trigger: CACGGAGTTGGCATGGTGCCAGAGTGGAGCGACAAT...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCGTTGTTCCGGGGGACTaGGGTCTCTTGCATAAGGCA +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFVVPGD*GLLHKA
Trigger: TGCCTTATGCAAGAGACCTCAGTCCCCCGGAACAAC...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310346.8
CDS-3UTR TCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACGGACCCCAAATTGGATaGGGTGGAGAGAGCTCGAGA +
Preference number: 4 (lower is better)
Translates to: FQSKLSGREAIGHVLATDGPQIG*GGESSR
Trigger: TCTCGAGCTCTCTCCACCTCATCCAATTTGGGGTCC...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATCCAGGGGCCCCGAGGTaGAGTGAGCGGAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYPGAPR*SERRSA
Trigger: AGCACTTCTCCGCTCACTTCACCTCGGGGCCCCTGG...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAAGAGGCCCACACTGCCTaGCCACAGGCTGGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: THSASHLTLFSLLGSVYKEAHTA*PQAGGP
Trigger: TGGCCCACCAGCCTGTGGTCAGGCAGTGTGGGCCTC...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTTATCAGTGCCGGGTCTaGGCAGCCACAGGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPYQCRV*AATGSG
Trigger: TCCGGAACCTGTGGCTGCGCAGACCCGGCACTGATA...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS-3UTR GCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAAGCCAAAGCCCTCGTCTaGGTCGGCCATGGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: THSASHLTLFSLLGSVYKAKALV*VGHGAP
Trigger: GGGCGCACCATGGCCGACGCAGACGAGGGCTTTGGC...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000405440.7
CDS-3UTR GCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCTGGCGGGCTCAGCTTTaGCCGTCACAGACCATTTAT +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCWRAQL*PSQTIY
Trigger: ATAAATGGTCTGTGACGGGCAAAGCTGAGCCCGCCA...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTTGGCGGGCTCAGCTTTaGCCGTCACAGACCATTTAT +
Preference number: 4 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGWRAQL*PSQTIY
Trigger: ATAAATGGTCTGTGACGGGCAAAGCTGAGCCCGCCA...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTTTGGAGGCCACTTTTTaGCTCACGGTGCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSLEATF*LTVLLG
Trigger: CCCCAGGAGCACCGTGAGGCAAAAAGTGGCCTCCAA...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTGCAAGCTTGCCGCTGTaGCGACTCTGTCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSASLPL*RLCPVG
Trigger: TCCTACAGGACAGAGTCGGCACAGCGGCAAGCTTGC...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCGCATACATGCAAGCTTaGCGCTGTGCCGACTCTGTC +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFAYMQA*RCADSV
Trigger: GACAGAGTCGGCACAGCGGCAAGCTTGCATGTATGC...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTCAGAGCTGGCATACATaGAAGCTTGCCGCTGTGCCG +
Preference number: 4 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSQSWHT*KLAAVP
Trigger: CGGCACAGCGGCAAGCTTGCATGTATGCCAGCTCTG...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCTGCTGTAGGAAGGCATaGTTGGCCACGTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFCCRKA*LATCCS
Trigger: GCTGCAACACGTGGCCAAGCATGCCTTCCTACAGCA...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp GTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCCTGTTATCACAGTCCTaGCTACATGTAAACGGGGGC +
Preference number: 4 (lower is better)
Translates to: VNTELALLSQSCLHVNGGLLSQS*LHVNGG
Trigger: GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAG...GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCGTGAGCTTGAGTTTCTaGAAGGAGACGAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCVSLSF*KETSCL
Trigger: GAGGCAGCTCGTCTCCTTCCAGAAACTCAAGCTCAC...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTACGGAGGTCTGGTGCTaGAACATTCCCTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSTEVWC*NIPSPS
Trigger: GCTGGGAGAGGGAATGTTCCAGCACCAGACCTCCGT...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTTGGGCCACGGAGGTCTaGTGCTGGAACATTCCCTCT +
Preference number: 4 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSWATEV*CWNIPS
Trigger: AGAGGGAATGTTCCAGCACCAGACCTCCGTGGCCCA...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGTCCGTGGGGTTCTCTTaGCTACTGTCTCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRSVGFS*LLSLSF
Trigger: GAAGGAGAGAGACAGTAGCCAAGAGAACCCCACGGA...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTGTGTTGGCATTGGTGTaGGCGTGGTTTCTTTGGCGA +
Preference number: 4 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGVLALV*AWFLWR
Trigger: TCGCCAAAGAAACCACGCCCACACCAATGCCAACAC...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGGTGTTGGCATTGGTGTaGGCGTGGTTTCTTTGGCGA +
Preference number: 4 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRVLALV*AWFLWR
Trigger: TCGCCAAAGAAACCACGCCCACACCAATGCCAACAC...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCCCAGGGAGGGAAAGTTaGAAGCCCAGTGAATGGTCG +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFPGRES*KPSEWS
Trigger: CGACCATTCACTGGGCTTCCAACTTTCCCTCCCTGG...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS-3UTR CCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATGGGGAGCAGGCATGGTaGCTCCGGGGTTTATGCGGG +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYGEQAW*LRGLCG
Trigger: CCCGCATAAACCCCGGAGCCACCATGCCTGCTCCCC...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS-3UTR TCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTCTCGAGACTCGCTGCTaGAAGGACTGTGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPLETRC*KDCGWR
Trigger: CCTCCAACCACAGTCCTTTCAGCAGCGAGTCTCGAG...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAACCAGGGGCCCCGAGGTaGAGTGAGCGGAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: THSASHLTLFSLLGSVYKPGAPR*SERRSA
Trigger: AGCACTTCTCCGCTCACTTCACCTCGGGGCCCCTGG...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp GTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCAGGAAATGTCTGTTGTaGAGCAGGCCTCACTTTAGC +
Preference number: 4 (lower is better)
Translates to: VNTELALLSQSCLHVNGGRKCLL*SRPHFS
Trigger: GCTAAAGTGAGGCCTGCTTCACAACAGACATTTCCT...GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTATCTGGGGAGTAGCGTaGATGTGGCTGGTTGATGGG +
Preference number: 4 (lower is better)
Translates to: FVHNSCQHRACTVITVLPIWGVA*MWLVDG
Trigger: CCCATCAACCAGCCACATTCACGCTACTCCCCAGAT...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTGGTCGAAGTCCTTTCTaGGCGCAGCTTTCAGGATTA +
Preference number: 4 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGGRSPF*AQLSGL
Trigger: TAATCCTGAAAGCTGCGCTCAGAAAGGACTTCGACC...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS-3UTR TCA 90 bp GTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCAAGTTGGAAGCCCAGTaGATGGTCGAAGTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: VNTELALLSQSCLHVNGGKLEAQ*MVEVLS
Trigger: AGAAAGGACTTCGACCATTCACTGGGCTTCCAACTT...GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS-3UTR GCA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTTATCTCACCAGCCGCTaGACCTATAGGACTTGGAGA +
Preference number: 4 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGYLTSR*TYRTWR
Trigger: TCTCCAAGTCCTATAGGTGCAGCGGCTGGTGAGATA...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS-3UTR GCA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTTCCAGCGACCTTGAGTaGAGATGTGAACATTGGGTG +
Preference number: 4 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGSSDLE*RCEHWV
Trigger: CACCCAATGTTCACATCTGCACTCAAGGTCGCTGGA...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTAACACACACCTCCTCTaGTGTGCGCTTGCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSNTHLL*CALALP
Trigger: AGGGAGAGCAAGCGCACAGCAGAGGAGGTGTGTGTT...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS-3UTR GCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAAAGCCTCCGCGGCGACTaGCCACCTCCAACACACACC +
Preference number: 4 (lower is better)
Translates to: THSASHLTLFSLLGSVYKSLRGD*PPPTHT
Trigger: GGTGTGTGTTGGAGGTGGGCAGTCGCCGCGGAGGCT...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS-3UTR GCA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTAATAGCGGCTACTGCTaGCTACTAGGGCGCACCTAC +
Preference number: 4 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSNSGYC*LLGRTY
Trigger: GTAGGTGCGCCCTAGTAGGCAGCAGTAGCCGCTATT...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS-3UTR CCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTCTTCACGAAGGGAGGTaGGAGTCCACCTCAGACCTC +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPLHEGR*ESTSDL
Trigger: GAGGTCTGAGGTGGACTCCCACCTCCCTTCGTGAAG...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS-3UTR CCA 90 bp GTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCCCTTCACTTTGTAACTaGGAAACATCCGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VNTELALLSQSCLHVNGGPSLCN*ETSAFQ
Trigger: CTGGAAGGCGGATGTTTCCCAGTTACAAAGTGAAGG...GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTACAGGCGGCCAGGCATaGCGGGCTCAGCTTTGCCCG +
Preference number: 4 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVTGGQA*RAQLCP
Trigger: CGGGCAAAGCTGAGCCCGCCATGCCTGGCCGCCTGT...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACGTGAGCTTGAGTTTCTaGAAGGAGACGAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: FQSKLSGREAIGHVLATDVSLSF*KETSCL
Trigger: GAGGCAGCTCGTCTCCTTCCAGAAACTCAAGCTCAC...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTCCAAATGGGTCCAGGTaGTTGTTGGTGAGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGPNGSR*LLVSLS
Trigger: ACTCAAGCTCACCAACAACCACCTGGACCCATTTGG...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTCACGGTGCTCCTaGGGACCACGGGATATTCTT +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPASRCS*GPRDIL
Trigger: AAGAATATCCCGTGGTCCCCAGGAGCACCGTGAGGC...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACCCAAATTGGATGAGGTaGAGAGAGCTCGAGACTCGC +
Preference number: 4 (lower is better)
Translates to: FQSKLSGREAIGHVLATDPNWMR*RELETR
Trigger: GCGAGTCTCGAGCTCTCTCCACCTCATCCAATTTGG...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCATTGGGACCCCAAATTaGATGAGGTGGAGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCIGTPN*MRWREL
Trigger: GAGCTCTCTCCACCTCATCCAATTTGGGGTCCCAAT...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTATTGGGACCCCAAATTaGATGAGGTGGAGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGIGTPN*MRWREL
Trigger: GAGCTCTCTCCACCTCATCCAATTTGGGGTCCCAAT...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCAGGGATGGTCTGTGGTaGAACATTCTTCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: VNTELALLSQSCLHVNGGRDGLW*NILPLS
Trigger: GGAAAGAGGAAGAATGTTCCACCACAGACCATCCCT...GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTCAGGCCCTGCTGCTGTaGATAGCTAGAGCGGTAGAA +
Preference number: 4 (lower is better)
Translates to: FVHNSCQHRACTVITVLPQALLL*IARAVE
Trigger: TTCTACCGCTCTAGCTATCCACAGCAGCAGGGCCTG...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACGTAGGAAGGCATGCTTaGCCACGTGTTGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: FQSKLSGREAIGHVLATDVGRHA*PRVAAD
Trigger: ATCAGCTGCAACACGTGGCCAAGCATGCCTTCCTAC...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCGTAGGAAGGCATGCTTaGCCACGTGTTGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFVGRHA*PRVAAD
Trigger: ATCAGCTGCAACACGTGGCCAAGCATGCCTTCCTAC...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTGCATTGGTGTGGGCGTaGTTTCTTTGGCGAGATATC +
Preference number: 4 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGALVWA*FLWRDI
Trigger: GATATCTCGCCAAAGAAACCACGCCCACACCAATGC...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTTGGAAGCCCAGTGAATaGTCGAAGTCCTTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGWKPSE*SKSFLS
Trigger: GCTCAGAAAGGACTTCGACCATTCACTGGGCTTCCA...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS-3UTR TCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACCATGGAGAAACACTTTaGTTCCCTCCATGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: FQSKLSGREAIGHVLATDHGETL*FPPCPA
Trigger: AGCAGGGCATGGAGGGAATCAAAGTGTTTCTCCATG...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000405440.7
CDS-3UTR TCA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTATCTTCTTCACTGGGTaGTGTCTCCATGTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGIFFTG*CLHVGL
Trigger: AAGCCCTACATGGAGACATCACCCAGTGAAGAAGAT...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCAGGAAATGTCTGTTGTaGAGCAGGCCTCACTTTAGC +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCRKCLL*SRPHFS
Trigger: GCTAAAGTGAGGCCTGCTTCACAACAGACATTTCCT...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGGTGGTTTCAAGCTACTaGTTAGATCAGCATCCAGCG +
Preference number: 4 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRVVSSY*LDQHPA
Trigger: CGCTGGATGCTGATCTAATCAGTAGCTTGAAACCAC...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTGCGAGATATCATTGGTaGCTGTGTCTTGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGARYHW*LCLASS
Trigger: AGAAGAGGCAAGACACAGTCACCAATGATATCTCGC...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATTGGAAGGAGACGAGCTaGCTCATCCAATGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYWKETS*LIQCAP
Trigger: CGGGGCGCATTGGATGAGGCAGCTCGTCTCCTTCCA...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCATACATGCAAGCTTaGCGCTGTGCCGACTCTGTC +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPAYMQA*RCADSV
Trigger: GACAGAGTCGGCACAGCGGCAAGCTTGCATGTATGC...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACCTGTTATCACAGTCCTaGCTACATGTAAACGGGGGC +
Preference number: 4 (lower is better)
Translates to: FQSKLSGREAIGHVLATDLLSQS*LHVNGG
Trigger: GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAG...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp GTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCCTTGGCCAGCTCCTATaGTGGGTTTCATTTCATGTT +
Preference number: 4 (lower is better)
Translates to: VNTELALLSQSCLHVNGGLGQLL*WVSFHV
Trigger: AACATGAAATGAAACCCAGCATAGGAGCTGGCCAAG...GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTTGCACCTATAGGACTTaGAGACGTCACGAGTCACGC +
Preference number: 4 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSCTYRT*RRHESR
Trigger: GCGTGACTCGTGACGTCTCCAAGTCCTATAGGTGCA...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS-3UTR CCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCCCTTCACTTTGTAACTaGGAAACATCCGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCPSLCN*ETSAFQ
Trigger: CTGGAAGGCGGATGTTTCCCAGTTACAAAGTGAAGG...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACCTGCTGAAAGGACTGTaGTTGGAGGCCACTTTTTGC +
Preference number: 4 (lower is better)
Translates to: FQSKLSGREAIGHVLATDLLKGL*LEATFC
Trigger: GCAAAAAGTGGCCTCCAACCACAGTCCTTTCAGCAG...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTCCAAATTGGATGAGGTaGAGAGAGCTCGAGACTCGC +
Preference number: 4 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSPNWMR*RELETR
Trigger: GCGAGTCTCGAGCTCTCTCCACCTCATCCAATTTGG...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACATTGGGACCCCAAATTaGATGAGGTGGAGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: FQSKLSGREAIGHVLATDIGTPN*MRWREL
Trigger: GAGCTCTCTCCACCTCATCCAATTTGGGGTCCCAAT...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTAGGGATGGTCTGTGGTaGAACATTCTTCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGRDGLW*NILPLS
Trigger: GGAAAGAGGAAGAATGTTCCACCACAGACCATCCCT...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTCAGGCCCTGCTGCTGTaGATAGCTAGAGCGGTAGAA +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPQALLL*IARAVE
Trigger: TTCTACCGCTCTAGCTATCCACAGCAGCAGGGCCTG...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTGTAGGAAGGCATGCTTaGCCACGTGTTGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: FVHNSCQHRACTVITVLPVGRHA*PRVAAD
Trigger: ATCAGCTGCAACACGTGGCCAAGCATGCCTTCCTAC...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTGTGGGGAGCCATGGTTaGCCATGCCAGCCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVVGSHG*PCQPAE
Trigger: CTCGGCTGGCTGGCATGGCCAACCATGGCTCCCCAC...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATTCCCTCTCCCAGCTGTaGGGAGCCATGGTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYSLSQL*GAMVGH
Trigger: ATGGCCAACCATGGCTCCCCACAGCTGGGAGAGGGA...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTTGCCTGACCACAGGCTaGTGGGCCACGGAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVCLTTG*WATEVW
Trigger: CCAGACCTCCGTGGCCCACCAGCCTGTGGTCAGGCA...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCTGGGCGTGGTTTCTTTaGCGAGATATCATTGGTGAC +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCWAWFL*RDIIGD
Trigger: GTCACCAATGATATCTCGCCAAAGAAACCACGCCCA...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCTTCCAGCCTTGGTTATaGTCATTTCCGTGCCCACTT +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFFQPWL*SFPCPL
Trigger: AAGTGGGCACGGAAATGATCATAACCAAGGCTGGAA...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp GTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCCAATCTTTAATTGCGTaGTCTTGTGGTTCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: VNTELALLSQSCLHVNGGQSLIA*SCGSGR
Trigger: CCTACCAGAACCACAAGATCACGCAATTAAAGATTG...GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAAGCCACGTGTTGCAGCTaGTGTCCTCTAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: THSASHLTLFSLLGSVYKATCCS*CPLGWA
Trigger: TGCCCAGCCTAGAGGACATCAGCTGCAACACGTGGC...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACAGGAAATGTCTGTTGTaGAGCAGGCCTCACTTTAGC +
Preference number: 4 (lower is better)
Translates to: FQSKLSGREAIGHVLATDRKCLL*SRPHFS
Trigger: GCTAAAGTGAGGCCTGCTTCACAACAGACATTTCCT...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACGTGGTTTCAAGCTACTaGTTAGATCAGCATCCAGCG +
Preference number: 4 (lower is better)
Translates to: FQSKLSGREAIGHVLATDVVSSY*LDQHPA
Trigger: CGCTGGATGCTGATCTAATCAGTAGCTTGAAACCAC...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTCAGGGATGGTTTACTTaGAGGGAATCCCGCAAGTAC +
Preference number: 4 (lower is better)
Translates to: FVHNSCQHRACTVITVLPQGWFT*RESRKY
Trigger: GTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTG...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCAGTTTGGGTTGTTGGTaGTGGAGGTTTGGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFSLGCW*WRFGRL
Trigger: CAACCTTCCAAACCTCCATCACCAACAACCCAAACT...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTCATGGAGAAACACTTTaGTTCCCTCCATGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: FVHNSCQHRACTVITVLPHGETL*FPPCPP
Trigger: TGGAGGGCATGGAGGGAATCAAAGTGTTTCTCCATG...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349716.9
CDS-3UTR GCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAAGCAGGGCAGGTCTTTTaGGTCAGGCTCCAGAGGCGT +
Preference number: 4 (lower is better)
Translates to: THSASHLTLFSLLGSVYKAGQVF*VRLQRR
Trigger: ACGCCTCTGGAGCCTGACGCAAAAGACCTGCCCTGC...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000405440.7
CDS-3UTR GCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTTGGCGGGCTCAGCTTTaGCCGTCACAGACCATTTAT +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPWRAQL*PSQTIY
Trigger: ATAAATGGTCTGTGACGGGCAAAGCTGAGCCCGCCA...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCCTGGTAGGAAGTCACTaGTATAAACGCAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFLVGSH*YKRSLR
Trigger: CCTGAGACTGCGTTTATAGCAGTGACTTCCTACCAG...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATCAGAGCTGGCATACATaGAAGCTTGCCGCTGTGCCG +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYQSWHT*KLAAVP
Trigger: CGGCACAGCGGCAAGCTTGCATGTATGCCAGCTCTG...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTTCCAGCGACCTTGAGTaGAGATGTGAACATTGGGTG +
Preference number: 4 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSSSDLE*RCEHWV
Trigger: CACCCAATGTTCACATCTGCACTCAAGGTCGCTGGA...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCCTTGGCCAGCTCCTATaGTGGGTTTCATTTCATGTT +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCLGQLL*WVSFHV
Trigger: AACATGAAATGAAACCCAGCATAGGAGCTGGCCAAG...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTTGCACCTATAGGACTTaGAGACGTCACGAGTCACGC +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPCTYRT*RRHESR
Trigger: GCGTGACTCGTGACGTCTCCAAGTCCTATAGGTGCA...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS-3UTR CCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCTCCGTGCCCACTTCGTaGAATTTTAGCCACAGTTCT +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFSVPTS*NFSHSS
Trigger: AGAACTGTGGCTAAAATTCCACGAAGTGGGCACGGA...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTCCAAATGGGTCCAGGTaGTTGTTGGTGAGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSPNGSR*LLVSLS
Trigger: ACTCAAGCTCACCAACAACCACCTGGACCCATTTGG...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTCCAAATGGGTCCAGGTaGTTGTTGGTGAGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: FVHNSCQHRACTVITVLPPNGSR*LLVSLS
Trigger: ACTCAAGCTCACCAACAACCACCTGGACCCATTTGG...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTCTGCTGAAAGGACTGTaGTTGGAGGCCACTTTTTGC +
Preference number: 4 (lower is better)
Translates to: FVHNSCQHRACTVITVLPLLKGL*LEATFC
Trigger: GCAAAAAGTGGCCTCCAACCACAGTCCTTTCAGCAG...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAAATGCTCCTGGGGCAGTaGGTATGGGTTGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: THSASHLTLFSLLGSVYKMLLGQ*VWVGWR
Trigger: CCTCCACCCAACCCATACCCACTGCCCCAGGAGCAT...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTATAGGGATGGTCTGTaGTGGAACATTCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: VNTELALLSQSCLHVNGGYRDGL*WNILPL
Trigger: AAGAGGAAGAATGTTCCACCACAGACCATCCCTATA...GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCAGGAATCTTCTTCACTaGGTGATGTCTCCATGTAGG +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCRNLLH*VMSPCR
Trigger: CCTACATGGAGACATCACCCAGTGAAGAAGATTCCT...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTTCCGTGGGGTTCTCTTaGCTACTGTCTCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPSVGFS*LLSLSF
Trigger: GAAGGAGAGAGACAGTAGCCAAGAGAACCCCACGGA...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTGAAAAATCTTGTCCGTaGGGTTCTCTTGGCTACTGT +
Preference number: 4 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGEKSCP*GSLGYC
Trigger: ACAGTAGCCAAGAGAACCCCACGGACAAGATTTTTC...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCTGGGCGTGGTTTCTTTaGCGAGATATCATTGGTGAC +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFWAWFL*RDIIGD
Trigger: GTCACCAATGATATCTCGCCAAAGAAACCACGCCCA...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTGCATTGGTGTGGGCGTaGTTTCTTTGGCGAGATATC +
Preference number: 4 (lower is better)
Translates to: FVHNSCQHRACTVITVLPALVWA*FLWRDI
Trigger: GATATCTCGCCAAAGAAACCACGCCCACACCAATGC...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCAACACAGTTTTGTGTTaGCATTGGTGTGGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFNTVLC*HWCGRG
Trigger: ACCACGCCCACACCAATGCCAACACAAAACTGTGTT...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCGGCCAGCTCCTATGCTaGGTTTCATTTCATGTTATT +
Preference number: 4 (lower is better)
Translates to: VNTELALLSQSCLHVNGGGQLLC*VSFHVI
Trigger: AATAACATGAAATGAAACCCAGCATAGGAGCTGGCC...GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTTTCCAGCCTTGGTTATaGTCATTTCCGTGCCCACTT +
Preference number: 4 (lower is better)
Translates to: FVHNSCQHRACTVITVLPFQPWL*SFPCPL
Trigger: AAGTGGGCACGGAAATGATCATAACCAAGGCTGGAA...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp GTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCCAGGTACAATGTCCATaGGAAGAATGTACTTCGTTT +
Preference number: 4 (lower is better)
Translates to: VNTELALLSQSCLHVNGGQVQCP*EECTSF
Trigger: AAACGAAGTACATTCTTCTCATGGACATTGTACCTG...GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTGCGAATTTGTATCTGTaGTCGTCGGCAGGTACAATG +
Preference number: 4 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSANLYL*SSAGTM
Trigger: CATTGTACCTGCCGACGATCACAGATACAAATTCGC...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTGTCTCAGGAAAGACGTaGGTGCAGAACGCTGTATTT +
Preference number: 4 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSVSGKT*VQNAVF
Trigger: AAATACAGCGTTCTGCACTCACGTCTTTCCTGAGAC...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATGGACCCCAAATTGGATaGGGTGGAGAGAGCTCGAGA +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYGPQIG*GGESSR
Trigger: TCTCGAGCTCTCTCCACCTCATCCAATTTGGGGTCC...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTATCTTCTTCACTGGGTaGTGTCTCCATGTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSIFFTG*CLHVGL
Trigger: AAGCCCTACATGGAGACATCACCCAGTGAAGAAGAT...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTGTGGTTTCAAGCTACTaGTTAGATCAGCATCCAGCG +
Preference number: 4 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSVVSSY*LDQHPA
Trigger: CGCTGGATGCTGATCTAATCAGTAGCTTGAAACCAC...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTAGTTTGGGTTGTTGGTaGTGGAGGTTTGGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSSLGCW*WRFGRL
Trigger: CAACCTTCCAAACCTCCATCACCAACAACCCAAACT...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTGCGAGATATCATTGGTaGCTGTGTCTTGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FVHNSCQHRACTVITVLPARYHW*LCLASS
Trigger: AGAAGAGGCAAGACACAGTCACCAATGATATCTCGC...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTCTGGTAGGAAGTCACTaGTATAAACGCAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSLVGSH*YKRSLR
Trigger: CCTGAGACTGCGTTTATAGCAGTGACTTCCTACCAG...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGATTCTTGACATTCTGTaGAGCTCCATGTCATCACTG +
Preference number: 4 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRILDIL*SSMSSL
Trigger: CAGTGATGACATGGAGCTGCACAGAATGTCAAGAAT...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAAGCAAGCTTGCCGCTGTaGCGACTCTGTCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: THSASHLTLFSLLGSVYKASLPL*RLCPVG
Trigger: TCCTACAGGACAGAGTCGGCACAGCGGCAAGCTTGC...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATTGCTGTAGGAAGGCATaGTTGGCCACGTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYCCRKA*LATCCS
Trigger: GCTGCAACACGTGGCCAAGCATGCCTTCCTACAGCA...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATTCCACTCTGGCACCATaGCAACTCCGTGCACAGAGT +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYSTLAP*QLRAQS
Trigger: ACTCTGTGCACGGAGTTGGCATGGTGCCAGAGTGGA...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCCTGAATAAGATAGGATaGCAGGGAGCGTCAGTGTTA +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFLNKIG*QGASVL
Trigger: TAACACTGACGCTCCCTGGCATCCTATCTTATTCAG...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACTGTCAACACAGAGCTTaGACTGTTATCACAGTCCTG +
Preference number: 4 (lower is better)
Translates to: FQSKLSGREAIGHVLATDCQHRA*TVITVL
Trigger: CAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACA...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACAGTGACGTTGGGTTaGCTCGATGCTCACAAAGTA +
Preference number: 4 (lower is better)
Translates to: FVHNSCQHRACTVITVLPTVTLG*LDAHKV
Trigger: TACTTTGTGAGCATCGAGGCAACCCAACGTCACTGT...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS-3UTR CCA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGTGCCCCGAAATCCTTTaGCAAAGGGATTATTCTCAA +
Preference number: 4 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRCPEIL*QRDYSQ
Trigger: TTGAGAATAATCCCTTTGCCAAAGGATTTCGGGGCA...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTTGCCCCGAAATCCTTTaGCAAAGGGATTATTCTCAA +
Preference number: 4 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGCPEIL*QRDYSQ
Trigger: TTGAGAATAATCCCTTTGCCAAAGGATTTCGGGGCA...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCTTCTCACACTGGTATTaGGACCCCAAATTGGATGAG +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFFSHWY*DPKLDE
Trigger: CTCATCCAATTTGGGGTCCCAATACCAGTGTGAGAA...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATCAGGCCCTGCTGCTGTaGATAGCTAGAGCGGTAGAA +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYQALLL*IARAVE
Trigger: TTCTACCGCTCTAGCTATCCACAGCAGCAGGGCCTG...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAAACGGAGGTCTGGTGCTaGAACATTCCCTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: THSASHLTLFSLLGSVYKTEVWC*NIPSPS
Trigger: GCTGGGAGAGGGAATGTTCCAGCACCAGACCTCCGT...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAATGGGCCACGGAGGTCTaGTGCTGGAACATTCCCTCT +
Preference number: 4 (lower is better)
Translates to: THSASHLTLFSLLGSVYKWATEV*CWNIPS
Trigger: AGAGGGAATGTTCCAGCACCAGACCTCCGTGGCCCA...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATATTGTCGCTCCACTCTaGCACCATGCCAACTCCGTG +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYIVAPL*HHANSV
Trigger: CACGGAGTTGGCATGGTGCCAGAGTGGAGCGACAAT...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTCCCCAAATAAGGGACTaGGTCCCATTAAGAAAATTG +
Preference number: 4 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGPQIRD*VPLRKL
Trigger: CAATTTTCTTAATGGGACCCAGTCCCTTATTTGGGG...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCGTTTTGTGTTGGCATTaGTGTGGGCGTGGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFVLCWH*CGRGFF
Trigger: AAAGAAACCACGCCCACACCAATGCCAACACAAAAC...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTCAGGTACAATGTCCATaGGAAGAATGTACTTCGTTT +
Preference number: 4 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGQVQCP*EECTSF
Trigger: AAACGAAGTACATTCTTCTCATGGACATTGTACCTG...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCCAATCTTTAATTGCGTaGTCTTGTGGTTCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFQSLIA*SCGSGR
Trigger: CCTACCAGAACCACAAGATCACGCAATTAAAGATTG...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCTTTACTTTGCATTCTTaGCATTCTGTGCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCFTLHS*HSVQLH
Trigger: ATGGAGCTGCACAGAATGTCAAGAATGCAAAGTAAA...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTCTCGAGACTCGCTGCTaGAAGGACTGTGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVLETRC*KDCGWR
Trigger: CCTCCAACCACAGTCCTTTCAGCAGCGAGTCTCGAG...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTATCTTCTTCACTGGGTaGTGTCTCCATGTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPIFFTG*CLHVGL
Trigger: AAGCCCTACATGGAGACATCACCCAGTGAAGAAGAT...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCGATGTGAACATTGGGTaGAATGAAAAATCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCDVNIG*NEKSCP
Trigger: CGGACAAGATTTTTCATTTCACCCAATGTTCACATC...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAAATCTGGGGAGTAGCGTaGATGTGGCTGGTTGATGGG +
Preference number: 4 (lower is better)
Translates to: THSASHLTLFSLLGSVYKIWGVA*MWLVDG
Trigger: CCCATCAACCAGCCACATTCACGCTACTCCCCAGAT...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCGAGATATCATTGGTaGCTGTGTCTTGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPARYHW*LCLASS
Trigger: AGAAGAGGCAAGACACAGTCACCAATGATATCTCGC...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGGAATTTAGAATAATATaGCCAAATGGGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: HQDRDRLQLRTREKHSMREFRII*PNGSRW
Trigger: CCACCTGGACCCATTTGGGCATATTATTCTAAATTC...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTCTGAATAAGATAGGATaGCAGGGAGCGTCAGTGTTA +
Preference number: 4 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSLNKIG*QGASVL
Trigger: TAACACTGACGCTCCCTGGCATCCTATCTTATTCAG...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTCTGAATAAGATAGGATaGCAGGGAGCGTCAGTGTTA +
Preference number: 4 (lower is better)
Translates to: FVHNSCQHRACTVITVLPLNKIG*QGASVL
Trigger: TAACACTGACGCTCCCTGGCATCCTATCTTATTCAG...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACTGCCCCGAAATCCTTTaGCAAAGGGATTATTCTCAA +
Preference number: 4 (lower is better)
Translates to: FQSKLSGREAIGHVLATDCPEIL*QRDYSQ
Trigger: TTGAGAATAATCCCTTTGCCAAAGGATTTCGGGGCA...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTTTCTCACACTGGTATTaGGACCCCAAATTGGATGAG +
Preference number: 4 (lower is better)
Translates to: FVHNSCQHRACTVITVLPFSHWY*DPKLDE
Trigger: CTCATCCAATTTGGGGTCCCAATACCAGTGTGAGAA...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTACACCATTCTCACACTaGTATTGGGACCCCAAATTG +
Preference number: 4 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSTPFSH*YWDPKL
Trigger: CAATTTGGGGTCCCAATACCAGTGTGAGAATGGTGT...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTTGGGCCACGGAGGTCTaGTGCTGGAACATTCCCTCT +
Preference number: 4 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVWATEV*CWNIPS
Trigger: AGAGGGAATGTTCCAGCACCAGACCTCCGTGGCCCA...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACGTTATCCTGACTCCATaGGTAAGTAGAGGCAAAACT +
Preference number: 4 (lower is better)
Translates to: FQSKLSGREAIGHVLATDVILTP*VSRGKT
Trigger: AGTTTTGCCTCTACTTACCCATGGAGTCAGGATAAC...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATGTGTTGGCATTGGTGTaGGCGTGGTTTCTTTGGCGA +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYVLALV*AWFLWR
Trigger: TCGCCAAAGAAACCACGCCCACACCAATGCCAACAC...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCAAAATTAAAAGCTCTTaGCCAGCTCCTATGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFKIKSS*PAPMLG
Trigger: ACCCAGCATAGGAGCTGGCCAAGAGCTTTTAATTTT...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR CAA 72 bp TTGGGTGAAATGAAAAATCTTGTCCGTGGGGTTCTCTaGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LGEMKNLVRGVL*ATVSLLLSLSP
Trigger: AGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAGAACCCCACGGACAAGATTTTTCATTTCACCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTCAATCTTTAATTGCGTaGTCTTGTGGTTCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: FVHNSCQHRACTVITVLPQSLIA*SCGSGR
Trigger: CCTACCAGAACCACAAGATCACGCAATTAAAGATTG...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCTTTACTTTGCATTCTTaGCATTCTGTGCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFFTLHS*HSVQLH
Trigger: ATGGAGCTGCACAGAATGTCAAGAATGCAAAGTAAA...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATCAGGGATGGTTTACTTaGAGGGAATCCCGCAAGTAC +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYQGWFT*RESRKY
Trigger: GTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTG...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTATTCTTGACATTCTGTaGAGCTCCATGTCATCACTG +
Preference number: 4 (lower is better)
Translates to: FVHNSCQHRACTVITVLPILDIL*SSMSSL
Trigger: CAGTGATGACATGGAGCTGCACAGAATGTCAAGAAT...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTTGCTGTAGGAAGGCATaGTTGGCCACGTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVCCRKA*LATCCS
Trigger: GCTGCAACACGTGGCCAAGCATGCCTTCCTACAGCA...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTTCCACTCTGGCACCATaGCAACTCCGTGCACAGAGT +
Preference number: 4 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVSTLAP*QLRAQS
Trigger: ACTCTGTGCACGGAGTTGGCATGGTGCCAGAGTGGA...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTTGTCAACACAGAGCTTaGACTGTTATCACAGTCCTG +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPCQHRA*TVITVL
Trigger: CAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACA...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTCTTGGCCAGCTCCTATaGTGGGTTTCATTTCATGTT +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPLGQLL*WVSFHV
Trigger: AACATGAAATGAAACCCAGCATAGGAGCTGGCCAAG...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTTGGCTCCGGGGTTTATaGGGGGTTTACTGCTTACCC +
Preference number: 4 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVWLRGL*GVYCLP
Trigger: GGGTAAGCAGTAAACCCCGCATAAACCCCGGAGCCA...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS-3UTR CCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATCTCCCAGCTCAAGGTTaGTTTGTGGTCTCCGACAAA +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYLPAQG*FVVSDK
Trigger: TTTGTCGGAGACCACAAACCAACCTTGAGCTGGGAG...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS-3UTR CCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAACCAAATTGGATGAGGTaGAGAGAGCTCGAGACTCGC +
Preference number: 4 (lower is better)
Translates to: THSASHLTLFSLLGSVYKPNWMR*RELETR
Trigger: GCGAGTCTCGAGCTCTCTCCACCTCATCCAATTTGG...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTACACCATTCTCACACTaGTATTGGGACCCCAAATTG +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPTPFSH*YWDPKL
Trigger: CAATTTGGGGTCCCAATACCAGTGTGAGAATGGTGT...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTTATAGGGATGGTCTGTaGTGGAACATTCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSYRDGL*WNILPL
Trigger: AAGAGGAAGAATGTTCCACCACAGACCATCCCTATA...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTAGGAATCTTCTTCACTaGGTGATGTCTCCATGTAGG +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPRNLLH*VMSPCR
Trigger: CCTACATGGAGACATCACCCAGTGAAGAAGATTCCT...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGAAAAATCTTGTCCGTaGGGTTCTCTTGGCTACTGT +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPEKSCP*GSLGYC
Trigger: ACAGTAGCCAAGAGAACCCCACGGACAAGATTTTTC...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTCCCCAAATAAGGGACTaGGTCCCATTAAGAAAATTG +
Preference number: 4 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSPQIRD*VPLRKL
Trigger: CAATTTTCTTAATGGGACCCAGTCCCTTATTTGGGG...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATCTGGAAAGACAGAGCTaGCAAGATGGTAGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYLERQS*QDGRAE
Trigger: TTCAGCCCTACCATCTTGCCAGCTCTGTCTTTCCAG...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATGCATTGGTGTGGGCGTaGTTTCTTTGGCGAGATATC +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYALVWA*FLWRDI
Trigger: GATATCTCGCCAAAGAAACCACGCCCACACCAATGC...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTGGCCAGCTCCTATGCTaGGTTTCATTTCATGTTATT +
Preference number: 4 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSGQLLC*VSFHVI
Trigger: AATAACATGAAATGAAACCCAGCATAGGAGCTGGCC...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
3UTR CAA 72 bp ATACTGTTTTCGGCTTTCAGTAAACACAGTTTTGTGTaGGCATTGGTGTGGGCGTGGTTTCTTTGGCGAGAT +
Preference number: 4 (lower is better)
Translates to: ILFSAFSKHSFV*ALVWAWFLWRD
Trigger: ATCTCGCCAAAGAAACCACGCCCACACCAATGCCAACACAAAACTGTGTTTACTGAAAGCCGAAAACAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATTTCCAGCCTTGGTTATaGTCATTTCCGTGCCCACTT +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYFQPWL*SFPCPL
Trigger: AAGTGGGCACGGAAATGATCATAACCAAGGCTGGAA...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATGCGAATTTGTATCTGTaGTCGTCGGCAGGTACAATG +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYANLYL*SSAGTM
Trigger: CATTGTACCTGCCGACGATCACAGATACAAATTCGC...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACCGCAAGTACATATTTTaGAATATACTTGCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: FQSKLSGREAIGHVLATDRKYIF*NILASD
Trigger: GTCTGAGGCAAGTATATTTCAAAATATGTACTTGCG...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTATTGTGCATTTTGCTTaGCATCCAGTTTGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: FVHNSCQHRACTVITVLPIVHFA*HPVWVV
Trigger: AACAACCCAAACTGGATGTCAAGCAAAATGCACAAT...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTATTGTGCATTTTGCTTaGCATCCAGTTTGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSIVHFA*HPVWVV
Trigger: AACAACCCAAACTGGATGTCAAGCAAAATGCACAAT...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTGAATTTAGAATAATATaGCCAAATGGGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSEFRII*PNGSRW
Trigger: CCACCTGGACCCATTTGGGCATATTATTCTAAATTC...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGGGATATTCTTTACTTTaGATTCTTGACATTCTGTGC +
Preference number: 4 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRGYSLL*ILDILC
Trigger: GCACAGAATGTCAAGAATGCAAAGTAAAGAATATCC...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATTTATGCGGGGTTTACTaGTTACCCAGAATAGCGGCT +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYLCGVY*LPRIAA
Trigger: AGCCGCTATTCTGGGTAAGCAGTAAACCCCGCATAA...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS-3UTR CCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAAATCCCACCTCTTCTTTaGAGCGCAAAAGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: THSASHLTLFSLLGSVYKIPPLL*SAKARS
Trigger: ACTCCTGGCTTTTGCGCTCCAAAGAAGAGGTGGGAT...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS-3UTR CCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATCCTTCACTTTGTAACTaGGAAACATCCGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYPSLCN*ETSAFQ
Trigger: CTGGAAGGCGGATGTTTCCCAGTTACAAAGTGAAGG...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTGTGAGCTTGAGTTTCTaGAAGGAGACGAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVVSLSF*KETSCL
Trigger: GAGGCAGCTCGTCTCCTTCCAGAAACTCAAGCTCAC...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGGCCAGCTCCTATGCTaGGTTTCATTTCATGTTATT +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPGQLLC*VSFHVI
Trigger: AATAACATGAAATGAAACCCAGCATAGGAGCTGGCC...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTAAAATTAAAAGCTCTTaGCCAGCTCCTATGCTGGGT +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPKIKSS*PAPMLG
Trigger: ACCCAGCATAGGAGCTGGCCAAGAGCTTTTAATTTT...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAAGCGAATTTGTATCTGTaGTCGTCGGCAGGTACAATG +
Preference number: 4 (lower is better)
Translates to: THSASHLTLFSLLGSVYKANLYL*SSAGTM
Trigger: CATTGTACCTGCCGACGATCACAGATACAAATTCGC...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAAGTCTCAGGAAAGACGTaGGTGCAGAACGCTGTATTT +
Preference number: 4 (lower is better)
Translates to: THSASHLTLFSLLGSVYKVSGKT*VQNAVF
Trigger: AAATACAGCGTTCTGCACTCACGTCTTTCCTGAGAC...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTTTCTCAATCTTTAATTaGGTGATCTTGTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSFSIFN*VILWFW
Trigger: CCAGAACCACAAGATCACGCAATTAAAGATTGAGAA...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACGGATATTCTTTACTTTaGATTCTTGACATTCTGTGC +
Preference number: 4 (lower is better)
Translates to: FQSKLSGREAIGHVLATDGYSLL*ILDILC
Trigger: GCACAGAATGTCAAGAATGCAAAGTAAAGAATATCC...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTTCCAGCGACCTTGAGTaGAGATGTGAACATTGGGTG +
Preference number: 4 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVSSDLE*RCEHWV
Trigger: CACCCAATGTTCACATCTGCACTCAAGGTCGCTGGA...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTCTGTTATCACAGTCCTaGCTACATGTAAACGGGGGC +
Preference number: 4 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVLLSQS*LHVNGG
Trigger: GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAG...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCCCACCTCTTCTTTaGAGCGCAAAAGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVIPPLL*SAKARS
Trigger: ACTCCTGGCTTTTGCGCTCCAAAGAAGAGGTGGGAT...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS-3UTR CCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAATCCGTGCCCACTTCGTaGAATTTTAGCCACAGTTCT +
Preference number: 4 (lower is better)
Translates to: THSASHLTLFSLLGSVYKSVPTS*NFSHSS
Trigger: AGAACTGTGGCTAAAATTCCACGAAGTGGGCACGGA...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTCTGCTGAAAGGACTGTaGTTGGAGGCCACTTTTTGC +
Preference number: 4 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVLLKGL*LEATFC
Trigger: GCAAAAAGTGGCCTCCAACCACAGTCCTTTCAGCAG...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAAAGGGATGGTCTGTGGTaGAACATTCTTCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: THSASHLTLFSLLGSVYKRDGLW*NILPLS
Trigger: GGAAAGAGGAAGAATGTTCCACCACAGACCATCCCT...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATGAAAAATCTTGTCCGTaGGGTTCTCTTGGCTACTGT +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYEKSCP*GSLGYC
Trigger: ACAGTAGCCAAGAGAACCCCACGGACAAGATTTTTC...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTCTGGAAAGACAGAGCTaGCAAGATGGTAGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVLERQS*QDGRAE
Trigger: TTCAGCCCTACCATCTTGCCAGCTCTGTCTTTCCAG...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAAAACACAGTTTTGTGTTaGCATTGGTGTGGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: THSASHLTLFSLLGSVYKNTVLC*HWCGRG
Trigger: ACCACGCCCACACCAATGCCAACACAAAACTGTGTT...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTGTCTCAGGAAAGACGTaGGTGCAGAACGCTGTATTT +
Preference number: 4 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVVSGKT*VQNAVF
Trigger: AAATACAGCGTTCTGCACTCACGTCTTTCCTGAGAC...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTCGCAAGTACATATTTTaGAATATACTTGCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPRKYIF*NILASD
Trigger: GTCTGAGGCAAGTATATTTCAAAATATGTACTTGCG...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTAGTTTGGGTTGTTGGTaGTGGAGGTTTGGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVSLGCW*WRFGRL
Trigger: CAACCTTCCAAACCTCCATCACCAACAACCCAAACT...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTTTCTCAATCTTTAATTaGGTGATCTTGTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPFSIFN*VILWFW
Trigger: CCAGAACCACAAGATCACGCAATTAAAGATTGAGAA...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTGGATATTCTTTACTTTaGATTCTTGACATTCTGTGC +
Preference number: 4 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSGYSLL*ILDILC
Trigger: GCACAGAATGTCAAGAATGCAAAGTAAAGAATATCC...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATTATAGGGATGGTCTGTaGTGGAACATTCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYYRDGL*WNILPL
Trigger: AAGAGGAAGAATGTTCCACCACAGACCATCCCTATA...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATGTTATCCTGACTCCATaGGTAAGTAGAGGCAAAACT +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYVILTP*VSRGKT
Trigger: AGTTTTGCCTCTACTTACCCATGGAGTCAGGATAAC...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTTGGGCGTGGTTTCTTTaGCGAGATATCATTGGTGAC +
Preference number: 4 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVWAWFL*RDIIGD
Trigger: GTCACCAATGATATCTCGCCAAAGAAACCACGCCCA...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTAACACAGTTTTGTGTTaGCATTGGTGTGGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVNTVLC*HWCGRG
Trigger: ACCACGCCCACACCAATGCCAACACAAAACTGTGTT...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATGATGTGAACATTGGGTaGAATGAAAAATCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYDVNIG*NEKSCP
Trigger: CGGACAAGATTTTTCATTTCACCCAATGTTCACATC...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAAATTCTTGACATTCTGTaGAGCTCCATGTCATCACTG +
Preference number: 4 (lower is better)
Translates to: THSASHLTLFSLLGSVYKILDIL*SSMSSL
Trigger: CAGTGATGACATGGAGCTGCACAGAATGTCAAGAAT...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAAACCTCAGACCTCTATTaGAAGGAAATCGAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: THSASHLTLFSLLGSVYKTSDLY*KEIELF
Trigger: GAACAACTCGATTTCCTTCCAATAGAGGTCTGAGGT...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310346.8
CDS-3UTR CCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTACACCATTCTCACACTaGTATTGGGACCCCAAATTG +
Preference number: 4 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVTPFSH*YWDPKL
Trigger: CAATTTGGGGTCCCAATACCAGTGTGAGAATGGTGT...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATCAAAACCAAAGCAAATaGGGACATACAGAGGCTTTT +
Preference number: 4 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYQNQSK*GHTEAF
Trigger: AAAAGCCTCTGTATGTCCCCATTTGCTTTGGTTTTG...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTGTTTTGTGTTGGCATTaGTGTGGGCGTGGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVVLCWH*CGRGFF
Trigger: AAAGAAACCACGCCCACACCAATGCCAACACAAAAC...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAACAAAACCAAAGCAAATaGGGACATACAGAGGCTTTT +
Preference number: 4 (lower is better)
Translates to: THSASHLTLFSLLGSVYKQNQSK*GHTEAF
Trigger: AAAAGCCTCTGTATGTCCCCATTTGCTTTGGTTTTG...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTAAAATTAAAAGCTCTTaGCCAGCTCCTATGCTGGGT +
Preference number: 4 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVKIKSS*PAPMLG
Trigger: ACCCAGCATAGGAGCTGGCCAAGAGCTTTTAATTTT...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR TCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAACGCAAGTACATATTTTaGAATATACTTGCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: THSASHLTLFSLLGSVYKRKYIF*NILASD
Trigger: GTCTGAGGCAAGTATATTTCAAAATATGTACTTGCG...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTGAATTTAGAATAATATaGCCAAATGGGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVEFRII*PNGSRW
Trigger: CCACCTGGACCCATTTGGGCATATTATTCTAAATTC...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR GCA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAATTCTCAATCTTTAATTaGGTGATCTTGTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: THSASHLTLFSLLGSVYKFSIFN*VILWFW
Trigger: CCAGAACCACAAGATCACGCAATTAAAGATTGAGAA...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS GCA 90 bp TGCGTCAGGCTCCAGAGGCGTGTGCGCCAGGCCAAAGCCCTCGTCTaGGTCGGCCATGGTGCGCCCAGGGCCCTGTGCCCGCGCAAGGTT +
Preference number: 5 (lower is better)
Translates to: CVRLQRRVRQAKALV*VGHGAPRALCPRKV
Trigger: AACCTTGCGCGGGCACAGGGCCCTGGGCGCACCATGGCCGACGCAGACGAGGGCTTTGGCCTGGCGCACACGCCTCTGGAGCCTGACGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000405440.7
ENST00000552726.1
CDS GCA 90 bp GAGGCGTGTGCGCCAGGCCAAAGCCCTCGTCTGCGTCGGCCATGGTaGGCCCAGGGCCCTGTGCCCGCGCAAGGTTCTGCTCTCGTTCGG +
Preference number: 5 (lower is better)
Translates to: EACAPGQSPRLRRPW*AQGPVPAQGSALVR
Trigger: CCGAACGAGAGCAGAACCTTGCGCGGGCACAGGGCCCTGGGCGCACCATGGCCGACGCAGACGAGGGCTTTGGCCTGGCGCACACGCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS CCA 90 bp CCAGAGGCGTGTGCGCCAGGCCAAAGCCCTCGTCTGCGTCGGCCATaGTGCGCCCAGGGCCCTGTGCCCGCGCAAGGTTCTGCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: PEACAPGQSPRLRRP*CAQGPVPAQGSALR
Trigger: CCTCAGAGCAGAACCTTGCGCGGGCACAGGGCCCTGGGCGCACCATGGCCGACGCAGACGAGGGCTTTGGCCTGGCGCACACGCCTCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552726.1
CDS GCA 90 bp GAGGCGTGTGCGCCAGGCCAAAGCCCTCGTCTGCGTCGGCCATGGTaGGCCCAGGGCCCTGTGCCCGCGCAAGGTTCTGCTCTGAGGACA +
Preference number: 5 (lower is better)
Translates to: EACAPGQSPRLRRPW*AQGPVPAQGSALRT
Trigger: TGTCCTCAGAGCAGAACCTTGCGCGGGCACAGGGCCCTGGGCGCACCATGGCCGACGCAGACGAGGGCTTTGGCCTGGCGCACACGCCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552726.1
CDS CCA 90 bp CCAGAGGCGTGTGCGCCAGGCCAAAGCCCTCGTCTGCGTCGGCCATaGTGCGCCCAGGGCCCTGTGCCCGCGCAAGGTTCTGCTCTCCAA +
Preference number: 5 (lower is better)
Translates to: PEACAPGQSPRLRRP*CAQGPVPAQGSALQ
Trigger: TTGGAGAGCAGAACCTTGCGCGGGCACAGGGCCCTGGGCGCACCATGGCCGACGCAGACGAGGGCTTTGGCCTGGCGCACACGCCTCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310346.8
CDS CCA 90 bp CCAGAGGCGTGTGCGCCAGGCCAAAGCCCTCGTCTGCGTCGGCCATaGTGCGCCCAGGGCCCTGTGCCCGCGCAAGGTTCTGCTCTCGTT +
Preference number: 5 (lower is better)
Translates to: PEACAPGQSPRLRRP*CAQGPVPAQGSALV
Trigger: AACGAGAGCAGAACCTTGCGCGGGCACAGGGCCCTGGGCGCACCATGGCCGACGCAGACGAGGGCTTTGGCCTGGCGCACACGCCTCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS GCA 90 bp GAGGCGTGTGCGCCAGGCCAAAGCCCTCGTCTGCGTCGGCCATGGTaGGCCCAGGGCCCTGTGCCCGCGCAAGGTTCTGCTCTCCAACTA +
Preference number: 5 (lower is better)
Translates to: EACAPGQSPRLRRPW*AQGPVPAQGSALQL
Trigger: TAGTTGGAGAGCAGAACCTTGCGCGGGCACAGGGCCCTGGGCGCACCATGGCCGACGCAGACGAGGGCTTTGGCCTGGCGCACACGCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310346.8
CDS GCA 90 bp GGCCCCGAGCGCGCTCTCGGGTTTCGAATCGCAGGGCAGGTCTTTTaGGTCAGGCTCCAGAGGCGTGTGCGCCAGGCCAAAGCCCTCGTC +
Preference number: 5 (lower is better)
Translates to: GPERALGFRIAGQVF*VRLQRRVRQAKALV
Trigger: GACGAGGGCTTTGGCCTGGCGCACACGCCTCTGGAGCCTGACGCAAAAGACCTGCCCTGCGATTCGAAACCCGAGAGCGCGCTCGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310346.8
ENST00000405440.7
ENST00000526441.1
ENST00000552726.1
CDS GCA 90 bp TGCTGCCTACTAGGGCGCACCTACCGCTGGAGCCTCCGCGGCGACTaGCCACCTCCAACACACACCTCCTCTGCTGTGCGCTTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: CCLLGRTYRWSLRGD*PPPTHTSSAVRLLS
Trigger: GGAGAGCAAGCGCACAGCAGAGGAGGTGTGTGTTGGAGGTGGGCAGTCGCCGCGGAGGCTCCAGCGGTAGGTGCGCCCTAGTAGGCAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS TCA 90 bp CATGGTTGGCCATGCCAGCCAGCCGAGGGACCAGGGGCCCCGAGGTaGAGTGAGCGGAGAAGTGCTGGTAGGGTAGCCTGTCCATGGGCT +
Preference number: 5 (lower is better)
Translates to: HGWPCQPAEGPGAPR*SERRSAGRVACPWA
Trigger: AGCCCATGGACAGGCTACCCTACCAGCACTTCTCCGCTCACTTCACCTCGGGGCCCCTGGTCCCTCGGCTGGCTGGCATGGCCAACCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS TCA 90 bp GAAGGGTGCCAGGGGACTGCAGGCCAGTCTGAGGCCCACACTGCCTaGCCACAGGCTGGTGGGCCACGGAGGTCTGGTGCTGGAACATTC +
Preference number: 5 (lower is better)
Translates to: EGCQGTAGQSEAHTA*PQAGGPRRSGAGTF
Trigger: GAATGTTCCAGCACCAGACCTCCGTGGCCCACCAGCCTGTGGTCAGGCAGTGTGGGCCTCAGACTGGCCTGCAGTCCCCTGGCACCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS GCA 90 bp TTCGAATCGCAGGGCAGGTCTTTTGCGTCAGGCTCCAGAGGCGTGTaGGCCAGGCCAAAGCCCTCGTCTGCGTCGGCCATGGTGCGCCCA +
Preference number: 5 (lower is better)
Translates to: FESQGRSFASGSRGV*ARPKPSSASAMVRP
Trigger: TGGGCGCACCATGGCCGACGCAGACGAGGGCTTTGGCCTGGCGCACACGCCTCTGGAGCCTGACGCAAAAGACCTGCCCTGCGATTCGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000405440.7
ENST00000552726.1
CDS CCA 90 bp GACGTCACGAGTCACGCAACCGGCCCGCGCGCTGTCACGTTTGGCTaGGGGGCAGCGGCGGGAGGTAAATTTCTCTCCGTCTTCGCCTAT +
Preference number: 5 (lower is better)
Translates to: DVTSHATGPRAVTFG*GAAAGGKFLSVFAY
Trigger: ATAGGCGAAGACGGAGAGAAATTTACCTCCCGCCGCTGCCCCCCAGCCAAACGTGACAGCGCGCGGGCCGGTTGCGTGACTCGTGACGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS CCA 90 bp ACCCAGAATAGCGGCTACTGCTGCCTACTAGGGCGCACCTACCGCTaGAGCCTCCGCGGCGACTGCCCACCTCCAACACACACCTCCTCT +
Preference number: 5 (lower is better)
Translates to: TQNSGYCCLLGRTYR*SLRGDCPPPTHTSS
Trigger: AGAGGAGGTGTGTGTTGGAGGTGGGCAGTCGCCGCGGAGGCTCCAGCGGTAGGTGCGCCCTAGTAGGCAGCAGTAGCCGCTATTCTGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS GCA 90 bp CCGGGGTTTATGCGGGGTTTACTGCTTACCCAGAATAGCGGCTACTaGTGCCTACTAGGGCGCACCTACCGCTGGAGCCTCCGCGGCGAC +
Preference number: 5 (lower is better)
Translates to: PGFMRGLLLTQNSGY*CLLGRTYRWSLRGD
Trigger: GTCGCCGCGGAGGCTCCAGCGGTAGGTGCGCCCTAGTAGGCAGCAGTAGCCGCTATTCTGGGTAAGCAGTAAACCCCGCATAAACCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS TCA 90 bp CGGAGAAGTGCTGGTAGGGTAGCCTGTCCATGGGCTGCACGGTGGTaGCGGTGCAGCTGCTGTAGGAAGGCATGCTTGGCCACGTGTTGC +
Preference number: 5 (lower is better)
Translates to: RRSAGRVACPWAARW*RCSCCRKACLATCC
Trigger: GCAACACGTGGCCAAGCATGCCTTCCTACAGCAGCTGCACCGTCACCACCGTGCAGCCCATGGACAGGCTACCCTACCAGCACTTCTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS GCA 90 bp CTGGAGCCTCCGCGGCGACTGCCCACCTCCAACACACACCTCCTCTaGTGTGCGCTTGCTCTCCCTAAATACTTCCCAGTTGGCAAGCGC +
Preference number: 5 (lower is better)
Translates to: LEPPRRLPTSNTHLL*CALALPKYFPVGKR
Trigger: GCGCTTGCCAACTGGGAAGTATTTAGGGAGAGCAAGCGCACAGCAGAGGAGGTGTGTGTTGGAGGTGGGCAGTCGCCGCGGAGGCTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS GCA 90 bp GGGTTTATGCGGGGTTTACTGCTTACCCAGAATAGCGGCTACTGCTaGCTACTAGGGCGCACCTACCGCTGGAGCCTCCGCGGCGACTGC +
Preference number: 5 (lower is better)
Translates to: GFMRGLLLTQNSGYC*LLGRTYRWSLRGDC
Trigger: GCAGTCGCCGCGGAGGCTCCAGCGGTAGGTGCGCCCTAGTAGGCAGCAGTAGCCGCTATTCTGGGTAAGCAGTAAACCCCGCATAAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS CCA 90 bp CCAGGCGATAGCGACTATCTCACCAGCCGCTGCACCTATAGGACTTaGAGACGTCACGAGTCACGCAACCGGCCCGCGCGCTGTCACGTT +
Preference number: 5 (lower is better)
Translates to: PGDSDYLTSRCTYRT*RRHESRNRPARCHV
Trigger: AACGTGACAGCGCGCGGGCCGGTTGCGTGACTCGTGACGTCTCCAAGTCCTATAGGTGCAGCGGCTGGTGAGATAGTCGCTATCGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS CCA 90 bp TGTGCCCGCGCAAGGTTCTGCTCTCCAACTATCCCACCTCTTCTTTaGAGCGCAAAAGCCAGGAGTGCGCCTCGCTGGAGAGCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: CARARFCSPTIPPLL*SAKARSAPRWRAGL
Trigger: GAGCCCTGCTCTCCAGCGAGGCGCACTCCTGGCTTTTGCGCTCCAAAGAAGAGGTGGGATAGTTGGAGAGCAGAACCTTGCGCGGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310346.8
CDS CCA 90 bp TTGGATGAGGTGGAGAGAGCTCGAGACTCGCTGCTGAAAGGACTGTaGTTGGAGGCCACTTTTTGCCTCACGGTGCTCCTGGGGACCACG +
Preference number: 5 (lower is better)
Translates to: LDEVERARDSLLKGL*LEATFCLTVLLGTT
Trigger: CGTGGTCCCCAGGAGCACCGTGAGGCAAAAAGTGGCCTCCAACCACAGTCCTTTCAGCAGCGAGTCTCGAGCTCTCTCCACCTCATCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
ENST00000526441.1
CDS CCA 90 bp GGAGGCAGGAGGTCCTGGGAGGGGCCGGAAACACCATTCTCACACTaGTATTGGGACCCCAAATTGGATGAGGTGGAGAGAGCTCGAGAC +
Preference number: 5 (lower is better)
Translates to: GGRRSWEGPETPFSH*YWDPKLDEVERARD
Trigger: GTCTCGAGCTCTCTCCACCTCATCCAATTTGGGGTCCCAATACCAGTGTGAGAATGGTGTTTCCGGCCCCTCCCAGGACCTCCTGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
ENST00000526441.1
CDS TCA 90 bp GGGACCCCAAATTGGATGAGGTGGAGAGAGCTCGAGACTCGCTGCTaGAAGGACTGTGGTTGGAGGCCACTTTTTGCCTCACGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: GTPNWMRWRELETRC*KDCGWRPLFASRCS
Trigger: GGAGCACCGTGAGGCAAAAAGTGGCCTCCAACCACAGTCCTTTCAGCAGCGAGTCTCGAGCTCTCTCCACCTCATCCAATTTGGGGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
ENST00000526441.1
CDS CCA 90 bp AGGAGGTCCTGGGAGGGGCCGGAAACACCATTCTCACACTGGTATTaGGACCCCAAATTGGATGAGGTGGAGAGAGCTCGAGACTCGCTG +
Preference number: 5 (lower is better)
Translates to: RRSWEGPETPFSHWY*DPKLDEVERARDSL
Trigger: CAGCGAGTCTCGAGCTCTCTCCACCTCATCCAATTTGGGGTCCCAATACCAGTGTGAGAATGGTGTTTCCGGCCCCTCCCAGGACCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
ENST00000526441.1
CDS-3UTR CAA 90 bp GTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTGTGGGGAGCCATGGTaGGCCATGCCAGCCAGCCGA +
Preference number: 5 (lower is better)
Translates to: VNTELALLSQSCLHVNGGCGEPW*AMPASR
Trigger: TCGGCTGGCTGGCATGGCCAACCATGGCTCCCCACA...GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS CCA 90 bp ATCTCAGTGCCCCGCTCCTCCTTTACACCCCCAGGGAGGGAAAGTTaGAAGCCCAGTGAATGGTCGAAGTCCTTTCTGAGCGCAGCTTTC +
Preference number: 5 (lower is better)
Translates to: ISVPRSSFTPPGRES*KPSEWSKSFLSAAF
Trigger: GAAAGCTGCGCTCAGAAAGGACTTCGACCATTCACTGGGCTTCCAACTTTCCCTCCCTGGGGGTGTAAAGGAGGAGCGGGGCACTGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS-3UTR CAA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCTGTGGGGAGCCATGGTaGGCCATGCCAGCCAGCCGA +
Preference number: 5 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCCGEPW*AMPASR
Trigger: TCGGCTGGCTGGCATGGCCAACCATGGCTCCCCACA...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS GCA 90 bp AAAATAAAGAGGCAACCAGGCGATAGCGACTATCTCACCAGCCGCTaGACCTATAGGACTTGGAGACGTCACGAGTCACGCAACCGGCCC +
Preference number: 5 (lower is better)
Translates to: KIKRQPGDSDYLTSR*TYRTWRRHESRNRP
Trigger: GGGCCGGTTGCGTGACTCGTGACGTCTCCAAGTCCTATAGGTGCAGCGGCTGGTGAGATAGTCGCTATCGCCTGGTTGCCTCTTTATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS GCA 90 bp GCTCGAGACTCGCTGCTGAAAGGACTGTGGTTGGAGGCCACTTTTTaGCTCACGGTGCTCCTGGGGACCACGGGATATTCTTTACTTTGC +
Preference number: 5 (lower is better)
Translates to: ARDSLLKGLWLEATF*LTVLLGTTGYSLLC
Trigger: GCAAAGTAAAGAATATCCCGTGGTCCCCAGGAGCACCGTGAGGCAAAAAGTGGCCTCCAACCACAGTCCTTTCAGCAGCGAGTCTCGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
ENST00000526441.1
CDS-3UTR CAA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCGTTGGAGGCCACTTTTaGCCTCACGGTGCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCVGGHF*PHGAPG
Trigger: CCCAGGAGCACCGTGAGGCAAAAAGTGGCCTCCAAC...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS TCA 90 bp GCCGGAAACACCATTCTCACACTGGTATTGGGACCCCAAATTGGATaGGGTGGAGAGAGCTCGAGACTCGCTGCTGAAAGGACTGTGGTT +
Preference number: 5 (lower is better)
Translates to: AGNTILTLVLGPQIG*GGESSRLAAERTVV
Trigger: AACCACAGTCCTTTCAGCAGCGAGTCTCGAGCTCTCTCCACCTCATCCAATTTGGGGTCCCAATACCAGTGTGAGAATGGTGTTTCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
ENST00000526441.1
CDS CCA 90 bp GGAACTCTTCACGAAGGGAGGTGGGAGTCCACCTCAGACCTCTATTaGAAGGAAATCGAGTTGTTCCGGGGGACTGAGGTCTCTTGCATA +
Preference number: 5 (lower is better)
Translates to: GTLHEGRWESTSDLY*KEIELFRGTEVSCI
Trigger: TATGCAAGAGACCTCAGTCCCCCGGAACAACTCGATTTCCTTCCAATAGAGGTCTGAGGTGGACTCCCACCTCCCTTCGTGAAGAGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310346.8
CDS-3UTR CAA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGGGCATACATGCAAGCTaGCCGCTGTGCCGACTCTGT +
Preference number: 5 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRGIHAS*PLCRLC
Trigger: ACAGAGTCGGCACAGCGGCAAGCTTGCATGTATGCC...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp GTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCGAGGGGATAGAGTCCTaGGCACGCCATGAGAGTAGA +
Preference number: 5 (lower is better)
Translates to: VNTELALLSQSCLHVNGGEGIES*ARHESR
Trigger: TCTACTCTCATGGCGTGCCAAGGACTCTATCCCCTC...GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS CCA 90 bp TCCTCCTTTACACCCCCAGGGAGGGAAAGTTGGAAGCCCAGTGAATaGTCGAAGTCCTTTCTGAGCGCAGCTTTCAGGATTAAAGTTCCC +
Preference number: 5 (lower is better)
Translates to: SSFTPPGRESWKPSE*SKSFLSAAFRIKVP
Trigger: GGGAACTTTAATCCTGAAAGCTGCGCTCAGAAAGGACTTCGACCATTCACTGGGCTTCCAACTTTCCCTCCCTGGGGGTGTAAAGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS-3UTR CAA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCATGGCGGGCTCAGCTTaGCCCGTCACAGACCATTTA +
Preference number: 5 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCMAGSA*PVTDHL
Trigger: TAAATGGTCTGTGACGGGCAAAGCTGAGCCCGCCAT...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTGTTGGAGGCCACTTTTaGCCTCACGGTGCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSVGGHF*PHGAPG
Trigger: CCCAGGAGCACCGTGAGGCAAAAAGTGGCCTCCAAC...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTGTTGGAGGCCACTTTTaGCCTCACGGTGCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: FVHNSCQHRACTVITVLPVGGHF*PHGAPG
Trigger: CCCAGGAGCACCGTGAGGCAAAAAGTGGCCTCCAAC...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCGAGGGGATAGAGTCCTaGGCACGCCATGAGAGTAGA +
Preference number: 5 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCEGIES*ARHESR
Trigger: TCTACTCTCATGGCGTGCCAAGGACTCTATCCCCTC...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTGTCCGTGGGGTTCTCTaGGCTACTGTCTCTCTCCTT +
Preference number: 5 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGVRGVL*ATVSLL
Trigger: AAGGAGAGAGACAGTAGCCAAGAGAACCCCACGGAC...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGTATCCCACCTCTTCTTaGGAGCGCAAAAGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRYPTSS*ERKSQE
Trigger: CTCCTGGCTTTTGCGCTCCAAAGAAGAGGTGGGATA...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS-3UTR CAA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTTATCCCACCTCTTCTTaGGAGCGCAAAAGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGYPTSS*ERKSQE
Trigger: CTCCTGGCTTTTGCGCTCCAAAGAAGAGGTGGGATA...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS-3UTR CAA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCATGGCGGGCTCAGCTTaGCCCGTCACAGACCATTTA +
Preference number: 5 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFMAGSA*PVTDHL
Trigger: TAAATGGTCTGTGACGGGCAAAGCTGAGCCCGCCAT...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGCTGAAAGGACTGTGGTaGGAGGCCACTTTTTGCCTC +
Preference number: 5 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRLKGLW*EATFCL
Trigger: GAGGCAAAAAGTGGCCTCCAACCACAGTCCTTTCAG...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTGGCATACATGCAAGCTaGCCGCTGTGCCGACTCTGT +
Preference number: 5 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSGIHAS*PLCRLC
Trigger: ACAGAGTCGGCACAGCGGCAAGCTTGCATGTATGCC...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTCTGAGCACAGTGACGTaGGGTTGCCTCGATGCTCAC +
Preference number: 5 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSLSTVT*GCLDAH
Trigger: GTGAGCATCGAGGCAACCCAACGTCACTGTGCTCAG...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS TCA 90 bp CTGCTGTGGATAGCTAGAGCGGTAGAAGGAATCTTCTTCACTGGGTaGTGTCTCCATGTAGGGCTTCTTATAGGGATGGTCTGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: LLWIARAVEGIFFTG*CLHVGLLIGMVCGG
Trigger: TCCACCACAGACCATCCCTATAAGAAGCCCTACATGGAGACATCACCCAGTGAAGAAGATTCCTTCTACCGCTCTAGCTATCCACAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAACGCAGGGCAGGTCTTTaGCGTCAGGCTCCAGAGGCG +
Preference number: 5 (lower is better)
Translates to: THSASHLTLFSLLGSVYKRRAGL*RQAPEA
Trigger: CGCCTCTGGAGCCTGACGCAAAAGACCTGCCCTGCG...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000405440.7
CDS-3UTR CAA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCTCATGGAGAAACACTTaGATTCCCTCCATGCCCTGC +
Preference number: 5 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCSWRNT*IPSMPC
Trigger: GCAGGGCATGGAGGGAATCAAAGTGTTTCTCCATGA...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000405440.7
CDS-3UTR CAA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTTCATGGAGAAACACTTaGATTCCCTCCATGCCCTGC +
Preference number: 5 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGSWRNT*IPSMPC
Trigger: GCAGGGCATGGAGGGAATCAAAGTGTTTCTCCATGA...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000405440.7
CDS-3UTR CAA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGATCCGCCTTCCAGCCTaGGTTATGATCATTTCCGTG +
Preference number: 5 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRIRLPA*VMIISV
Trigger: CACGGAAATGATCATAACCAAGGCTGGAAGGCGGAT...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTATCCGCCTTCCAGCCTaGGTTATGATCATTTCCGTG +
Preference number: 5 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGIRLPA*VMIISV
Trigger: CACGGAAATGATCATAACCAAGGCTGGAAGGCGGAT...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCCTGAAAGGACTGTGGTaGGAGGCCACTTTTTGCCTC +
Preference number: 5 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFLKGLW*EATFCL
Trigger: GAGGCAAAAAGTGGCCTCCAACCACAGTCCTTTCAG...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTTATTGGGACCCCAAATaGGATGAGGTGGAGAGAGCT +
Preference number: 5 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGYWDPK*DEVERA
Trigger: AGCTCTCTCCACCTCATCCAATTTGGGGTCCCAATA...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCGGTACAATGGTAAATTaGGCTATGCTCCTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCGTMVN*AMLLGQ
Trigger: CTGCCCCAGGAGCATAGCCAAATTTACCATTGTACC...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCCAGCATCCAGCGACCTaGAGTGCAGATGTGAACATT +
Preference number: 5 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCQHPAT*SADVNI
Trigger: AATGTTCACATCTGCACTCAAGGTCGCTGGATGCTG...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp GTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTGGCGAGATATCATaGGTGACTGTGTCTTGCCTC +
Preference number: 5 (lower is better)
Translates to: VNTELALLSQSCLHVNGGFGEIS*VTVSCL
Trigger: GAGGCAAGACACAGTCACCAATGATATCTCGCCAAA...GCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCAAACACAGTTTTGTGTaGGCATTGGTGTGGGCGTGG +
Preference number: 5 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCKHSFV*ALVWAW
Trigger: CCACGCCCACACCAATGCCAACACAAAACTGTGTTT...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTCAGGTTCCGGACGTCTaGGCCCCGGGAATAAATAAA +
Preference number: 5 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSQVPDV*APGINK
Trigger: TTTATTTATTCCCGGGGCCAAGACGTCCGGAACCTG...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS-3UTR CAA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTCGCAGGGCAGGTCTTTaGCGTCAGGCTCCAGAGGCG +
Preference number: 5 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVRRAGL*RQAPEA
Trigger: CGCCTCTGGAGCCTGACGCAAAAGACCTGCCCTGCG...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000405440.7
CDS-3UTR CAA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCCTGCCCCGAAATCCTTaGGCAAAGGGATTATTCTCA +
Preference number: 5 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCLPRNP*AKGLFS
Trigger: TGAGAATAATCCCTTTGCCAAAGGATTTCGGGGCAG...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTCTGAAAGGACTGTGGTaGGAGGCCACTTTTTGCCTC +
Preference number: 5 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSLKGLW*EATFCL
Trigger: GAGGCAAAAAGTGGCCTCCAACCACAGTCCTTTCAG...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACTATTGGGACCCCAAATaGGATGAGGTGGAGAGAGCT +
Preference number: 5 (lower is better)
Translates to: FQSKLSGREAIGHVLATDYWDPK*DEVERA
Trigger: AGCTCTCTCCACCTCATCCAATTTGGGGTCCCAATA...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACCAGCATCCAGCGACCTaGAGTGCAGATGTGAACATT +
Preference number: 5 (lower is better)
Translates to: FQSKLSGREAIGHVLATDQHPAT*SADVNI
Trigger: AATGTTCACATCTGCACTCAAGGTCGCTGGATGCTG...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCATCCAGTTTGGGTTGTaGGTGATGGAGGTTTGGAAG +
Preference number: 5 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCIQFGL*VMEVWK
Trigger: CTTCCAAACCTCCATCACCAACAACCCAAACTGGAT...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCGACATCCAGTTTGGGTaGTTGGTGATGGAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFDIQFG*LVMEVW
Trigger: CCAAACCTCCATCACCAACAACCCAAACTGGATGTC...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGTTTGGCGAGATATCATaGGTGACTGTGTCTTGCCTC +
Preference number: 5 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRFGEIS*VTVSCL
Trigger: GAGGCAAGACACAGTCACCAATGATATCTCGCCAAA...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTCACAGTGACGTTGGGTaGCCTCGATGCTCACAAAGT +
Preference number: 5 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSHSDVG*PRCSQS
Trigger: ACTTTGTGAGCATCGAGGCAACCCAACGTCACTGTG...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS-3UTR CAA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTTCCTCTGCTGTGCGCTaGCTCTCCCTAAATACTTCC +
Preference number: 5 (lower is better)
Translates to: FVHNSCQHRACTVITVLPSSAVR*LSLNTS
Trigger: GGAAGTATTTAGGGAGAGCAAGCGCACAGCAGAGGA...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS TCA 90 bp TCTCTTTCTCCTCTCTCTCTCTCTTTCTCTAGGAAATGTCTGTTGTaGAGCAGGCCTCACTTTAGCTATTGTCGCTCCACTCTGGCACCA +
Preference number: 5 (lower is better)
Translates to: SLSPLSLSFSRKCLL*SRPHFSYCRSTLAP
Trigger: TGGTGCCAGAGTGGAGCGACAATAGCTAAAGTGAGGCCTGCTTCACAACAGACATTTCCTAGAGAAAGAGAGAGAGAGAGGAGAAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGCACCTCAGACCTCTATaGGAAGGAAATCGAGTTGTT +
Preference number: 5 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRHLRPL*EGNRVV
Trigger: AACAACTCGATTTCCTTCCAATAGAGGTCTGAGGTG...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310346.8
CDS-3UTR CAA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTCAGGTTCCGGACGTCTaGGCCCCGGGAATAAATAAA +
Preference number: 5 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPQVPDV*APGINK
Trigger: TTTATTTATTCCCGGGGCCAAGACGTCCGGAACCTG...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS-3UTR CAA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCGCTCAGGTGAAGACTTaGAAAAGGACCACCAAAAGA +
Preference number: 5 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCAQVKT*KRTTKR
Trigger: TCTTTTGGTGGTCCTTTTCAAAGTCTTCACCTGAGC...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS-3UTR CAA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTATCCGCCTTCCAGCCTaGGTTATGATCATTTCCGTG +
Preference number: 5 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSIRLPA*VMIISV
Trigger: CACGGAAATGATCATAACCAAGGCTGGAAGGCGGAT...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCAGAATGTACTTCGTTTaGGGATTAAGGCCCGTCACC +
Preference number: 5 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFRMYFV*GLRPVT
Trigger: GGTGACGGGCCTTAATCCCAAAACGAAGTACATTCT...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTGGTACAATGGTAAATTaGGCTATGCTCCTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: FVHNSCQHRACTVITVLPGTMVN*AMLLGQ
Trigger: CTGCCCCAGGAGCATAGCCAAATTTACCATTGTACC...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTCAGCATCCAGCGACCTaGAGTGCAGATGTGAACATT +
Preference number: 5 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSQHPAT*SADVNI
Trigger: AATGTTCACATCTGCACTCAAGGTCGCTGGATGCTG...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCTCAGGGATGGTTTACTaGAAGGGAATCCCGCAAGTA +
Preference number: 5 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFSGMVY*KGIPQV
Trigger: TACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGA...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACTCAGGGATGGTTTACTaGAAGGGAATCCCGCAAGTA +
Preference number: 5 (lower is better)
Translates to: FQSKLSGREAIGHVLATDSGMVY*KGIPQV
Trigger: TACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGA...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCTTGTCAACACAGAGCTaGCACTGTTATCACAGTCCT +
Preference number: 5 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCLSTQS*HCYHSP
Trigger: AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAA...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp TATAGGCCACGTTTTAGCGACAGACAGCTGGAAAGACAGAGCTGGCAAGATGGTTTGTCAACACAGAGCTaGCACTGTTATCACAGTCCT +
Preference number: 5 (lower is better)
Translates to: YRPRFSDRQLERQSWQDGLSTQS*HCYHSP
Trigger: AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAA...ACCATCTTGCCAGCTCTGTCTTTCCAGCTGTCTGTCGCTAAAACGTGGCCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGTTGTCAACACAGAGCTaGCACTGTTATCACAGTCCT +
Preference number: 5 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRLSTQS*HCYHSP
Trigger: AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAA...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACTTTGGCGAGATATCATaGGTGACTGTGTCTTGCCTC +
Preference number: 5 (lower is better)
Translates to: FQSKLSGREAIGHVLATDFGEIS*VTVSCL
Trigger: GAGGCAAGACACAGTCACCAATGATATCTCGCCAAA...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTAAACACAGTTTTGTGTaGGCATTGGTGTGGGCGTGG +
Preference number: 5 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSKHSFV*ALVWAW
Trigger: CCACGCCCACACCAATGCCAACACAAAACTGTGTTT...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTAAACACAGTTTTGTGTaGGCATTGGTGTGGGCGTGG +
Preference number: 5 (lower is better)
Translates to: FVHNSCQHRACTVITVLPKHSFV*ALVWAW
Trigger: CCACGCCCACACCAATGCCAACACAAAACTGTGTTT...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTTCATGGAGAAACACTTaGATTCCCTCCATGCCCTCC +
Preference number: 5 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSSWRNT*IPSMPS
Trigger: GGAGGGCATGGAGGGAATCAAAGTGTTTCTCCATGA...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349716.9
CDS-3UTR CAA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTAGAATGTACTTCGTTTaGGGATTAAGGCCCGTCACC +
Preference number: 5 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSRMYFV*GLRPVT
Trigger: GGTGACGGGCCTTAATCCCAAAACGAAGTACATTCT...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGCTTTACTTTGCATTCTaGACATTCTGTGCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRLYFAF*TFCAAP
Trigger: TGGAGCTGCACAGAATGTCAAGAATGCAAAGTAAAG...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCCTTTACTTTGCATTCTaGACATTCTGTGCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCLYFAF*TFCAAP
Trigger: TGGAGCTGCACAGAATGTCAAGAATGCAAAGTAAAG...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATGTCCGTGGGGTTCTCTaGGCTACTGTCTCTCTCCTT +
Preference number: 5 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYVRGVL*ATVSLL
Trigger: AAGGAGAGAGACAGTAGCCAAGAGAACCCCACGGAC...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTACTGAGCACGTGATATaGGAGAAGGCAGGACAAAAC +
Preference number: 5 (lower is better)
Translates to: FVHNSCQHRACTVITVLPTEHVI*EKAGQN
Trigger: GTTTTGTCCTGCCTTCTCCAATATCACGTGCTCAGT...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACTCAGTAAACACAGTTTaGTGTTGGCATTGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: FQSKLSGREAIGHVLATDSVNTV*CWHWCG
Trigger: CCCACACCAATGCCAACACAAAACTGTGTTTACTGA...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CTCTTGGCTACTGTCTCTCTCCTTCTCTCTCTTTCTCCTCTCTCTCTCTCTTTCTCAGTAAACACAGTTTaGTGTTGGCATTGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: LLATVSLLLSLSPLSLSFSVNTV*CWHWCG
Trigger: CCCACACCAATGCCAACACAAAACTGTGTTTACTGA...GAAAGAGAGAGAGAGAGGAGAAAGAGAGAGAAGGAGAGAGACAGTAGCCAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTCTAAATACTTCCCAGTaGGCAAGCGCCAAAGAACAC +
Preference number: 5 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSLNTSQ*ASAKEH
Trigger: GTGTTCTTTGGCGCTTGCCAACTGGGAAGTATTTAG...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS-3UTR CAA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAATGGAAGGAAATCGAGTaGTTCCGGGGGACTGAGGTC +
Preference number: 5 (lower is better)
Translates to: THSASHLTLFSLLGSVYKWKEIE*FRGTEV
Trigger: GACCTCAGTCCCCCGGAACAACTCGATTTCCTTCCA...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310346.8
CDS-3UTR CAA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAACCTCCCAGCTCAAGGTaGGTTTGTGGTCTCCGACAA +
Preference number: 5 (lower is better)
Translates to: THSASHLTLFSLLGSVYKPPSSR*VCGLRQ
Trigger: TTGTCGGAGACCACAAACCAACCTTGAGCTGGGAGG...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS-3UTR CAA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTAGAATGTACTTCGTTTaGGGATTAAGGCCCGTCACC +
Preference number: 5 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPRMYFV*GLRPVT
Trigger: GGTGACGGGCCTTAATCCCAAAACGAAGTACATTCT...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTCTGCCCCGAAATCCTTaGGCAAAGGGATTATTCTCA +
Preference number: 5 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPLPRNP*AKGLFS
Trigger: TGAGAATAATCCCTTTGCCAAAGGATTTCGGGGCAG...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTTCAGGGATGGTTTACTaGAAGGGAATCCCGCAAGTA +
Preference number: 5 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPSGMVY*KGIPQV
Trigger: TACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGA...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp GAGCTTGCACTGTTATCACAGTCCTGCCTACATGTAAACGGGGGCTTTTTAAGTTTTTGTCCACAACTCTaGTCAACACAGAGCTTGCAC +
Preference number: 5 (lower is better)
Translates to: ELALLSQSCLHVNGGFLSFCPQL*STQSLH
Trigger: GTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAA...ACTTAAAAAGCCCCCGTTTACATGTAGGCAGGACTGTGATAACAGTGCAAGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CTCACACTCTCTCACGTACTTAAACACACTCAGCCTCACATCTTACCCTGTTCTTTTTGTCCACAACTCTaGTCAACACAGAGCTTGCAC +
Preference number: 5 (lower is better)
Translates to: LTLSHVLKHTQPHILPCSFCPQL*STQSLH
Trigger: GTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAA...AGAACAGGGTAAGATGTGAGGCTGAGTGTGTTTAAGTACGTGAGAGAGTGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp TTTCAAAGCAAGCTTTCCGGAAGGGAAGCTATAGGCCACGTTTTAGCGACAGACGGGTGTTCAACTTCCTaGTACTTGTTTAAGCACATG +
Preference number: 5 (lower is better)
Translates to: FQSKLSGREAIGHVLATDGCSTS*YLFKHM
Trigger: CATGTGCTTAAACAAGTACAAGGAAGTTGAACACCC...GTCTGTCGCTAAAACGTGGCCTATAGCTTCCCTTCCGGAAAGCTTGCTTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS-3UTR CAA 90 bp TTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTGCCTCTTTACTTTGCATTCTaGACATTCTGTGCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: FVHNSCQHRACTVITVLPLYFAF*TFCAAP
Trigger: TGGAGCTGCACAGAATGTCAAGAATGCAAAGTAAAG...AGGCAGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTGAGGGGATAGAGTCCTaGGCACGCCATGAGAGTAGA +
Preference number: 5 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVEGIES*ARHESR
Trigger: TCTACTCTCATGGCGTGCCAAGGACTCTATCCCCTC...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CACCAAGACAGGGACAGACTCCAACTACGCACTAGGGAAAAACACTCAATGAGGCCGCAAGTACATATTTaGAAATATACTTGCCTCAGA +
Preference number: 5 (lower is better)
Translates to: HQDRDRLQLRTREKHSMRPQVHI*KYTCLR
Trigger: TCTGAGGCAAGTATATTTCAAAATATGTACTTGCGG...CCTCATTGAGTGTTTTTCCCTAGTGCGTAGTTGGAGTCTGTCCCTGTCTTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp CATTGGTGTGGGCGTGGTTTCTTTGGCGAGATATCATTGGTGACTGTGTCTTGCCCGCAAGTACATATTTaGAAATATACTTGCCTCAGA +
Preference number: 5 (lower is better)
Translates to: HWCGRGFFGEISLVTVSCPQVHI*KYTCLR
Trigger: TCTGAGGCAAGTATATTTCAAAATATGTACTTGCGG...GCAAGACACAGTCACCAATGATATCTCGCCAAAGAAACCACGCCCACACCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATGACATCCAGTTTGGGTaGTTGGTGATGGAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYDIQFG*LVMEVW
Trigger: CCAAACCTCCATCACCAACAACCCAAACTGGATGTC...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp GCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTATCACAGTCCTTCAGTAAACACAGTTTaGTGTTGGCATTGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: AFCPQLLSTQSLHCYHSPSVNTV*CWHWCG
Trigger: CCCACACCAATGCCAACACAAAACTGTGTTTACTGA...AGGACTGTGATAACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS CCA 90 bp CTTCCAACGTCTGTCAAGAAGAGCACGTACCTCCCAGCTCAAGGTTaGTTTGTGGTCTCCGACAAATTAAATATTACTGTTTATTACCAG +
Preference number: 5 (lower is better)
Translates to: LPTSVKKSTYLPAQG*FVVSDKLNITVYYQ
Trigger: CTGGTAATAAACAGTAATATTTAATTTGTCGGAGACCACAAACCAACCTTGAGCTGGGAGGTACGTGCTCTTCTTGACAGACGTTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS-3UTR CAA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATACTGAGCACGTGATATaGGAGAAGGCAGGACAAAAC +
Preference number: 5 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYTEHVI*EKAGQN
Trigger: GTTTTGTCCTGCCTTCTCCAATATCACGTGCTCAGT...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp GTGAATTTAGGTTTCAGGGATGGTTTACTTGAAGGGAATCCCGCAAGTACATATGCTCAGGTGAAGACTTaGAAAAGGACCACCAAAAGA +
Preference number: 5 (lower is better)
Translates to: VNLGFRDGLLEGNPASTYAQVKT*KRTTKR
Trigger: TCTTTTGGTGGTCCTTTTCAAAGTCTTCACCTGAGC...ATATGTACTTGCGGGATTCCCTTCAAGTAAACCATCCCTGAAACCTAAATTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS-3UTR CAA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTTATTGGGACCCCAAATaGGATGAGGTGGAGAGAGCT +
Preference number: 5 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVYWDPK*DEVERA
Trigger: AGCTCTCTCCACCTCATCCAATTTGGGGTCCCAATA...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTGGTACAATGGTAAATTaGGCTATGCTCCTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVGTMVN*AMLLGQ
Trigger: CTGCCCCAGGAGCATAGCCAAATTTACCATTGTACC...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAAATCCAGTTTGGGTTGTaGGTGATGGAGGTTTGGAAG +
Preference number: 5 (lower is better)
Translates to: THSASHLTLFSLLGSVYKIQFGL*VMEVWK
Trigger: CTTCCAAACCTCCATCACCAACAACCCAAACTGGAT...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTACTGAGCACGTGATATaGGAGAAGGCAGGACAAAAC +
Preference number: 5 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVTEHVI*EKAGQN
Trigger: GTTTTGTCCTGCCTTCTCCAATATCACGTGCTCAGT...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp TATTTATTTTGGCTTTTTGTCCACAACTCTTGTCAACACAGAGCTTGCACTGTTTTTTGTCCACAACTCTaGTCAACACAGAGCTTGCAC +
Preference number: 5 (lower is better)
Translates to: YLFWLFVHNSCQHRACTVFCPQL*STQSLH
Trigger: GTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAA...AACAGTGCAAGCTCTGTGTTGACAAGAGTTGTGGACAAAAAGCCAAAATAAATA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS-3UTR CAA 90 bp ACACACTCAGCCTCACATCTTACCCTGTTCTCTTTATTAGGGTCTGTTTATAAACCGCAAGTACATATTTaGAAATATACTTGCCTCAGA +
Preference number: 5 (lower is better)
Translates to: THSASHLTLFSLLGSVYKPQVHI*KYTCLR
Trigger: TCTGAGGCAAGTATATTTCAAAATATGTACTTGCGG...TTTATAAACAGACCCTAATAAAGAGAACAGGGTAAGATGTGAGGCTGAGTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS GCA 72 bp CTCCAGAGGCGTGTGCGCCAGGCCAAAGCCCTCGTCTaGGTCGGCCATGGTGCGCCCAGGGCCCTGTGCCCG +
Preference number: 6 (lower is better)
Translates to: LQRRVRQAKALV*VGHGAPRALCP
Trigger: CGGGCACAGGGCCCTGGGCGCACCATGGCCGACGCAGACGAGGGCTTTGGCCTGGCGCACACGCCTCTGGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000405440.7
ENST00000552726.1
CDS CCA 72 bp TGTGCGCCAGGCCAAAGCCCTCGTCTGCGTCGGCCATaGTGCGCCCAGGGCCCTGTGCCCGCGCAAGGTTCT +
Preference number: 6 (lower is better)
Translates to: CAPGQSPRLRRP*CAQGPVPAQGS
Trigger: AGAACCTTGCGCGGGCACAGGGCCCTGGGCGCACCATGGCCGACGCAGACGAGGGCTTTGGCCTGGCGCACA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000405440.7
ENST00000552726.1
CDS GCA 72 bp CTCGTCTGCGTCGGCCATGGTGCGCCCAGGGCCCTGTaGCCGCGCAAGGTTCTGCTCTCGTTCGGTGAAGCC +
Preference number: 6 (lower is better)
Translates to: LVCVGHGAPRAL*PRKVLLSFGEA
Trigger: GGCTTCACCGAACGAGAGCAGAACCTTGCGCGGGCACAGGGCCCTGGGCGCACCATGGCCGACGCAGACGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS CAA 90 bp GGGCCCCGAGCGCGCTCTCGGGTTTCGAATCGCAGGGCAGGTCTTTaGCGTCAGGCTCCAGAGGCGTGTGCGCCAGGCCAAAGCCCTCGT +
Preference number: 6 (lower is better)
Translates to: GPRARSRVSNRRAGL*RQAPEACAPGQSPR
Trigger: ACGAGGGCTTTGGCCTGGCGCACACGCCTCTGGAGCCTGACGCAAAAGACCTGCCCTGCGATTCGAAACCCGAGAGCGCGCTCGGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310346.8
ENST00000405440.7
ENST00000526441.1
ENST00000552726.1
CDS GCA 72 bp CTCGTCTGCGTCGGCCATGGTGCGCCCAGGGCCCTGTaGCCGCGCAAGGTTCTGCTCTCCAACTATCCCACC +
Preference number: 6 (lower is better)
Translates to: LVCVGHGAPRAL*PRKVLLSNYPT
Trigger: GGTGGGATAGTTGGAGAGCAGAACCTTGCGCGGGCACAGGGCCCTGGGCGCACCATGGCCGACGCAGACGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310346.8
CDS CCA 72 bp AGCGGCTACTGCTGCCTACTAGGGCGCACCTACCGCTaGAGCCTCCGCGGCGACTGCCCACCTCCAACACAC +
Preference number: 6 (lower is better)
Translates to: SGYCCLLGRTYR*SLRGDCPPPTH
Trigger: GTGTGTTGGAGGTGGGCAGTCGCCGCGGAGGCTCCAGCGGTAGGTGCGCCCTAGTAGGCAGCAGTAGCCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS TCA 72 bp CCATGCCAGCCAGCCGAGGGACCAGGGGCCCCGAGGTaGAGTGAGCGGAGAAGTGCTGGTAGGGTAGCCTGT +
Preference number: 6 (lower is better)
Translates to: PCQPAEGPGAPR*SERRSAGRVAC
Trigger: ACAGGCTACCCTACCAGCACTTCTCCGCTCACTTCACCTCGGGGCCCCTGGTCCCTCGGCTGGCTGGCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS GCA 72 bp CAGGGCAGGTCTTTTGCGTCAGGCTCCAGAGGCGTGTaGGCCAGGCCAAAGCCCTCGTCTGCGTCGGCCATG +
Preference number: 6 (lower is better)
Translates to: QGRSFASGSRGV*ARPKPSSASAM
Trigger: CATGGCCGACGCAGACGAGGGCTTTGGCCTGGCGCACACGCCTCTGGAGCCTGACGCAAAAGACCTGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000405440.7
ENST00000552726.1
CDS CCA 72 bp AGTCACGCAACCGGCCCGCGCGCTGTCACGTTTGGCTaGGGGGCAGCGGCGGGAGGTAAATTTCTCTCCGTC +
Preference number: 6 (lower is better)
Translates to: SHATGPRAVTFG*GAAAGGKFLSV
Trigger: GACGGAGAGAAATTTACCTCCCGCCGCTGCCCCCCAGCCAAACGTGACAGCGCGCGGGCCGGTTGCGTGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS GCA 72 bp GGGCGCAGAGCTGGCATACATGCAAGCTTGCCGCTGTaGCGACTCTGTCCTGTAGGAGGCACCCAGGCCCTG +
Preference number: 6 (lower is better)
Translates to: GRRAGIHASLPL*RLCPVGGTQAL
Trigger: CAGGGCCTGGGTGCCTCCTACAGGACAGAGTCGGCACAGCGGCAAGCTTGCATGTATGCCAGCTCTGCGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS CCA 72 bp CACTGCCTGACCACAGGCTGGTGGGCCACGGAGGTCTaGTGCTGGAACATTCCCTCTCCCAGCTGTGGGGAG +
Preference number: 6 (lower is better)
Translates to: HCLTTGWWATEV*CWNIPSPSCGE
Trigger: CTCCCCACAGCTGGGAGAGGGAATGTTCCAGCACCAGACCTCCGTGGCCCACCAGCCTGTGGTCAGGCAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS CAA 72 bp GCGCGCTCTCGGGTTTCGAATCGCAGGGCAGGTCTTTaGCGTCAGGCTCCAGAGGCGTGTGCGCCAGGCCAA +
Preference number: 6 (lower is better)
Translates to: ARSRVSNRRAGL*RQAPEACAPGQ
Trigger: TTGGCCTGGCGCACACGCCTCTGGAGCCTGACGCAAAAGACCTGCCCTGCGATTCGAAACCCGAGAGCGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310346.8
ENST00000405440.7
ENST00000526441.1
ENST00000552726.1
CDS TCA 72 bp GCTGGTAGGGTAGCCTGTCCATGGGCTGCACGGTGGTaGCGGTGCAGCTGCTGTAGGAAGGCATGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: AGRVACPWAARW*RCSCCRKACLA
Trigger: GGCCAAGCATGCCTTCCTACAGCAGCTGCACCGTCACCACCGTGCAGCCCATGGACAGGCTACCCTACCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS GCA 72 bp CGCGCTCTCGGGTTTCGAATCGCAGGGCAGGTCTTTTaGGTCAGGCTCCAGAGGCGTGTGCGCCAGGCCAAA +
Preference number: 6 (lower is better)
Translates to: RALGFRIAGQVF*VRLQRRVRQAK
Trigger: TTTGGCCTGGCGCACACGCCTCTGGAGCCTGACGCAAAAGACCTGCCCTGCGATTCGAAACCCGAGAGCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310346.8
ENST00000405440.7
ENST00000526441.1
ENST00000552726.1
CDS CCA 72 bp AGCGACTATCTCACCAGCCGCTGCACCTATAGGACTTaGAGACGTCACGAGTCACGCAACCGGCCCGCGCGC +
Preference number: 6 (lower is better)
Translates to: SDYLTSRCTYRT*RRHESRNRPAR
Trigger: GCGCGCGGGCCGGTTGCGTGACTCGTGACGTCTCCAAGTCCTATAGGTGCAGCGGCTGGTGAGATAGTCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS GCA 72 bp CGGGGTTTACTGCTTACCCAGAATAGCGGCTACTGCTaGCTACTAGGGCGCACCTACCGCTGGAGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: RGLLLTQNSGYC*LLGRTYRWSLR
Trigger: GCGGAGGCTCCAGCGGTAGGTGCGCCCTAGTAGGCAGCAGTAGCCGCTATTCTGGGTAAGCAGTAAACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS CAA 90 bp GATGAGGTGGAGAGAGCTCGAGACTCGCTGCTGAAAGGACTGTGGTaGGAGGCCACTTTTTGCCTCACGGTGCTCCTGGGGACCACGGGA +
Preference number: 6 (lower is better)
Translates to: DEVERARDSLLKGLW*EATFCLTVLLGTTG
Trigger: TCCCGTGGTCCCCAGGAGCACCGTGAGGCAAAAAGTGGCCTCCAACCACAGTCCTTTCAGCAGCGAGTCTCGAGCTCTCTCCACCTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
ENST00000526441.1
CDS GCA 72 bp GCGGGAGGTAAATTTCTCTCCGTCTTCGCCTATCAGTaGCGGGTCTGCGCAGCCACAGGTTCCGGACGTCTT +
Preference number: 6 (lower is better)
Translates to: AGGKFLSVFAYQ*RVCAATGSGRL
Trigger: AAGACGTCCGGAACCTGTGGCTGCGCAGACCCGGCACTGATAGGCGAAGACGGAGAGAAATTTACCTCCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS GCA 72 bp CCGCGGCGACTGCCCACCTCCAACACACACCTCCTCTaGTGTGCGCTTGCTCTCCCTAAATACTTCCCAGTT +
Preference number: 6 (lower is better)
Translates to: PRRLPTSNTHLL*CALALPKYFPV
Trigger: AACTGGGAAGTATTTAGGGAGAGCAAGCGCACAGCAGAGGAGGTGTGTGTTGGAGGTGGGCAGTCGCCGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS CAA 72 bp GAGAGAGCTCGAGACTCGCTGCTGAAAGGACTGTGGTaGGAGGCCACTTTTTGCCTCACGGTGCTCCTGGGG +
Preference number: 6 (lower is better)
Translates to: ERARDSLLKGLW*EATFCLTVLLG
Trigger: CCCCAGGAGCACCGTGAGGCAAAAAGTGGCCTCCAACCACAGTCCTTTCAGCAGCGAGTCTCGAGCTCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
ENST00000526441.1
CDS CAA 90 bp CGCGGCGACTGCCCACCTCCAACACACACCTCCTCTGCTGTGCGCTaGCTCTCCCTAAATACTTCCCAGTTGGCAAGCGCCAAAGAACAC +
Preference number: 6 (lower is better)
Translates to: RGDCPPPTHTSSAVR*LSLNTSQLASAKEH
Trigger: GTGTTCTTTGGCGCTTGCCAACTGGGAAGTATTTAGGGAGAGCAAGCGCACAGCAGAGGAGGTGTGTGTTGGAGGTGGGCAGTCGCCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS GCA 72 bp AGGCAACCAGGCGATAGCGACTATCTCACCAGCCGCTaGACCTATAGGACTTGGAGACGTCACGAGTCACGC +
Preference number: 6 (lower is better)
Translates to: RQPGDSDYLTSR*TYRTWRRHESR
Trigger: GCGTGACTCGTGACGTCTCCAAGTCCTATAGGTGCAGCGGCTGGTGAGATAGTCGCTATCGCCTGGTTGCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS CCA 72 bp GTGGAGAGAGCTCGAGACTCGCTGCTGAAAGGACTGTaGTTGGAGGCCACTTTTTGCCTCACGGTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: VERARDSLLKGL*LEATFCLTVLL
Trigger: CAGGAGCACCGTGAGGCAAAAAGTGGCCTCCAACCACAGTCCTTTCAGCAGCGAGTCTCGAGCTCTCTCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
ENST00000526441.1
CDS CCA 72 bp TTCCCTCCATGCCCTCCAACTATCCCACCTCTTCTTTaGAGCGCAAAAGCCAGGAGTGCGCCTCGCTGGAGA +
Preference number: 6 (lower is better)
Translates to: FPPCPPTIPPLL*SAKARSAPRWR
Trigger: TCTCCAGCGAGGCGCACTCCTGGCTTTTGCGCTCCAAAGAAGAGGTGGGATAGTTGGAGGGCATGGAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349716.9
CDS CCA 72 bp CCCCGCTCCTCCTTTACACCCCCAGGGAGGGAAAGTTaGAAGCCCAGTGAATGGTCGAAGTCCTTTCTGAGC +
Preference number: 6 (lower is better)
Translates to: PRSSFTPPGRES*KPSEWSKSFLS
Trigger: GCTCAGAAAGGACTTCGACCATTCACTGGGCTTCCAACTTTCCCTCCCTGGGGGTGTAAAGGAGGAGCGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS CAA 72 bp CTCGCTGCTGAAAGGACTGTGGTTGGAGGCCACTTTTaGCCTCACGGTGCTCCTGGGGACCACGGGATATTC +
Preference number: 6 (lower is better)
Translates to: LAAERTVVGGHF*PHGAPGDHGIF
Trigger: GAATATCCCGTGGTCCCCAGGAGCACCGTGAGGCAAAAAGTGGCCTCCAACCACAGTCCTTTCAGCAGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
ENST00000526441.1
CDS CAA 72 bp ATTCCCTCCATGCCCTCCAACTATCCCACCTCTTCTTaGGAGCGCAAAAGCCAGGAGTGCGCCTCGCTGGAG +
Preference number: 6 (lower is better)
Translates to: IPSMPSNYPTSS*ERKSQECASLE
Trigger: CTCCAGCGAGGCGCACTCCTGGCTTTTGCGCTCCAAAGAAGAGGTGGGATAGTTGGAGGGCATGGAGGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349716.9
CDS GCA 72 bp TCGCTGCTGAAAGGACTGTGGTTGGAGGCCACTTTTTaGCTCACGGTGCTCCTGGGGACCACGGGATATTCT +
Preference number: 6 (lower is better)
Translates to: SLLKGLWLEATF*LTVLLGTTGYS
Trigger: AGAATATCCCGTGGTCCCCAGGAGCACCGTGAGGCAAAAAGTGGCCTCCAACCACAGTCCTTTCAGCAGCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
ENST00000526441.1
CDS CCA 72 bp CACGAAGGGAGGTGGGAGTCCACCTCAGACCTCTATTaGAAGGAAATCGAGTTGTTCCGGGGGACTGAGGTC +
Preference number: 6 (lower is better)
Translates to: HEGRWESTSDLY*KEIELFRGTEV
Trigger: GACCTCAGTCCCCCGGAACAACTCGATTTCCTTCCAATAGAGGTCTGAGGTGGACTCCCACCTCCCTTCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310346.8
CDS CAA 90 bp GAGGGGCCGGAAACACCATTCTCACACTGGTATTGGGACCCCAAATaGGATGAGGTGGAGAGAGCTCGAGACTCGCTGCTGAAAGGACTG +
Preference number: 6 (lower is better)
Translates to: EGPETPFSHWYWDPK*DEVERARDSLLKGL
Trigger: CAGTCCTTTCAGCAGCGAGTCTCGAGCTCTCTCCACCTCATCCAATTTGGGGTCCCAATACCAGTGTGAGAATGGTGTTTCCGGCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
ENST00000526441.1
CDS GCA 72 bp GCACGTACAGGCGGCCAGGCATGGCGGGCTCAGCTTTaGCCGTCACAGACCATTTATTATCTGCGAATTTGT +
Preference number: 6 (lower is better)
Translates to: ARTGGQAWRAQL*PSQTIYYLRIC
Trigger: ACAAATTCGCAGATAATAAATGGTCTGTGACGGGCAAAGCTGAGCCCGCCATGCCTGGCCGCCTGTACGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
ENST00000526441.1
ENST00000552726.1
CDS GCA 72 bp CCTCACTTTAGCTATTGTCGCTCCACTCTGGCACCATaGCAACTCCGTGCACAGAGTGGTACTGATGAGGGG +
Preference number: 6 (lower is better)
Translates to: PHFSYCRSTLAP*QLRAQSGTDEG
Trigger: CCCCTCATCAGTACCACTCTGTGCACGGAGTTGGCATGGTGCCAGAGTGGAGCGACAATAGCTAAAGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS CCA 72 bp GAAGGGGGAGAGGAGGGAACTCTTCACGAAGGGAGGTaGGAGTCCACCTCAGACCTCTATTGGAAGGAAATC +
Preference number: 6 (lower is better)
Translates to: EGGEEGTLHEGR*ESTSDLYWKEI
Trigger: GATTTCCTTCCAATAGAGGTCTGAGGTGGACTCCCACCTCCCTTCGTGAAGAGTTCCCTCCTCTCCCCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310346.8
CDS CCA 72 bp TGGGAGGGGCCGGAAACACCATTCTCACACTGGTATTaGGACCCCAAATTGGATGAGGTGGAGAGAGCTCGA +
Preference number: 6 (lower is better)
Translates to: WEGPETPFSHWY*DPKLDEVERAR
Trigger: TCGAGCTCTCTCCACCTCATCCAATTTGGGGTCCCAATACCAGTGTGAGAATGGTGTTTCCGGCCCCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
ENST00000526441.1
CDS CCA 72 bp AGGTCCTGGGAGGGGCCGGAAACACCATTCTCACACTaGTATTGGGACCCCAAATTGGATGAGGTGGAGAGA +
Preference number: 6 (lower is better)
Translates to: RSWEGPETPFSH*YWDPKLDEVER
Trigger: TCTCTCCACCTCATCCAATTTGGGGTCCCAATACCAGTGTGAGAATGGTGTTTCCGGCCCCTCCCAGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
ENST00000526441.1
CDS CCA 72 bp CTCTGTCCTGTAGGAGGCACCCAGGCCCTGCTGCTGTaGATAGCTAGAGCGGTAGAAGGAATCTTCTTCACT +
Preference number: 6 (lower is better)
Translates to: LCPVGGTQALLL*IARAVEGIFFT
Trigger: AGTGAAGAAGATTCCTTCTACCGCTCTAGCTATCCACAGCAGCAGGGCCTGGGTGCCTCCTACAGGACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS CAA 90 bp AGCTCGAGACTCGCTGCTGAAAGGACTGTGGTTGGAGGCCACTTTTaGCCTCACGGTGCTCCTGGGGACCACGGGATATTCTTTACTTTG +
Preference number: 6 (lower is better)
Translates to: SSRLAAERTVVGGHF*PHGAPGDHGIFFTL
Trigger: CAAAGTAAAGAATATCCCGTGGTCCCCAGGAGCACCGTGAGGCAAAAAGTGGCCTCCAACCACAGTCCTTTCAGCAGCGAGTCTCGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
ENST00000526441.1
CDS CAA 90 bp CACACCTCCTCTGCTGTGCGCTTGCTCTCCCTAAATACTTCCCAGTaGGCAAGCGCCAAAGAACACAAAATAGCCTCCAAGAGCACCGGC +
Preference number: 6 (lower is better)
Translates to: HTSSAVRLLSLNTSQ*ASAKEHKIASKSTG
Trigger: GCCGGTGCTCTTGGAGGCTATTTTGTGTTCTTTGGCGCTTGCCAACTGGGAAGTATTTAGGGAGAGCAAGCGCACAGCAGAGGAGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS CAA 90 bp CCAGGGGTGATCACACTCACCTTTCCTCTTGGTACAATGGTAAATTaGGCTATGCTCCTGGGGCAGTGGGTATGGGTTGGGTGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: PGVITLTFPLGTMVN*AMLLGQWVWVGWRQ
Trigger: CTGCCTCCACCCAACCCATACCCACTGCCCCAGGAGCATAGCCAAATTTACCATTGTACCAAGAGGAAAGGTGAGTGTGATCACCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526441.1
CDS TCA 72 bp CTTTACACCCCCAGGGAGGGAAAGTTGGAAGCCCAGTaGATGGTCGAAGTCCTTTCTGAGCGCAGCTTTCAG +
Preference number: 6 (lower is better)
Translates to: LYTPREGKLEAQ*MVEVLSERSFQ
Trigger: CTGAAAGCTGCGCTCAGAAAGGACTTCGACCATTCACTGGGCTTCCAACTTTCCCTCCCTGGGGGTGTAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS CCA 72 bp ACACCCCCAGGGAGGGAAAGTTGGAAGCCCAGTGAATaGTCGAAGTCCTTTCTGAGCGCAGCTTTCAGGATT +
Preference number: 6 (lower is better)
Translates to: TPPGRESWKPSE*SKSFLSAAFRI
Trigger: AATCCTGAAAGCTGCGCTCAGAAAGGACTTCGACCATTCACTGGGCTTCCAACTTTCCCTCCCTGGGGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS TCA 72 bp AATTGGATGAGGTGGAGAGAGCTCGAGACTCGCTGCTaGAAGGACTGTGGTTGGAGGCCACTTTTTGCCTCA +
Preference number: 6 (lower is better)
Translates to: NWMRWRELETRC*KDCGWRPLFAS
Trigger: TGAGGCAAAAAGTGGCCTCCAACCACAGTCCTTTCAGCAGCGAGTCTCGAGCTCTCTCCACCTCATCCAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
ENST00000526441.1
CDS TCA 72 bp ACCATTCTCACACTGGTATTGGGACCCCAAATTGGATaGGGTGGAGAGAGCTCGAGACTCGCTGCTGAAAGG +
Preference number: 6 (lower is better)
Translates to: TILTLVLGPQIG*GGESSRLAAER
Trigger: CCTTTCAGCAGCGAGTCTCGAGCTCTCTCCACCTCATCCAATTTGGGGTCCCAATACCAGTGTGAGAATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
ENST00000526441.1
CDS GCA 72 bp AAGGACTGTGGTTGGAGGCCACTTTTTGCCTCACGGTaGTCCTGGGGACCACGGGATATTCTTTACTTTGCA +
Preference number: 6 (lower is better)
Translates to: KDCGWRPLFASR*SWGPRDILYFA
Trigger: TGCAAAGTAAAGAATATCCCGTGGTCCCCAGGAGCACCGTGAGGCAAAAAGTGGCCTCCAACCACAGTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
ENST00000526441.1
CDS CAA 90 bp TGTGGTGGAACATTCTTCCTCTTTCCTCTTGGTACAATGGTAAATTaGGCTATGCTCCTGGGGCAGTGGGTATGGGTTGGGTGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: CGGTFFLFPLGTMVN*AMLLGQWVWVGWRQ
Trigger: CTGCCTCCACCCAACCCATACCCACTGCCCCAGGAGCATAGCCAAATTTACCATTGTACCAAGAGGAAAGAGGAAGAATGTTCCACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS CCA 72 bp TGTGGTTGGAGGCCACTTTTTGCCTCACGGTGCTCCTaGGGACCACGGGATATTCTTTACTTTGCATTCTTG +
Preference number: 6 (lower is better)
Translates to: CGWRPLFASRCS*GPRDILYFAFL
Trigger: CAAGAATGCAAAGTAAAGAATATCCCGTGGTCCCCAGGAGCACCGTGAGGCAAAAAGTGGCCTCCAACCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
ENST00000526441.1
CDS CAA 72 bp GAGTCCACCTCAGACCTCTATTGGAAGGAAATCGAGTaGTTCCGGGGGACTGAGGTCTCTTGCATAAGGCAT +
Preference number: 6 (lower is better)
Translates to: ESTSDLYWKEIE*FRGTEVSCIRH
Trigger: ATGCCTTATGCAAGAGACCTCAGTCCCCCGGAACAACTCGATTTCCTTCCAATAGAGGTCTGAGGTGGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310346.8
CDS CAA 72 bp ATCACACTCACCTTTCCTCTTGGTACAATGGTAAATTaGGCTATGCTCCTGGGGCAGTGGGTATGGGTTGGG +
Preference number: 6 (lower is better)
Translates to: ITLTFPLGTMVN*AMLLGQWVWVG
Trigger: CCCAACCCATACCCACTGCCCCAGGAGCATAGCCAAATTTACCATTGTACCAAGAGGAAAGGTGAGTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526441.1
CDS TCA 72 bp TGTAACTGGGAAACATCCGCCTTCCAGCCTTGGTTATaGTCATTTCCGTGCCCACTTCGTGGAATTTTAGCC +
Preference number: 6 (lower is better)
Translates to: CNWETSAFQPWL*SFPCPLRGILA
Trigger: GGCTAAAATTCCACGAAGTGGGCACGGAAATGATCATAACCAAGGCTGGAAGGCGGATGTTTCCCAGTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
ENST00000526441.1
ENST00000552726.1
CDS TCA 72 bp AAAGTTGGAAGCCCAGTGAATGGTCGAAGTCCTTTCTaGGCGCAGCTTTCAGGATTAAAGTTCCCGGATTCG +
Preference number: 6 (lower is better)
Translates to: KVGSPVNGRSPF*AQLSGLKFPDS
Trigger: CGAATCCGGGAACTTTAATCCTGAAAGCTGCGCTCAGAAAGGACTTCGACCATTCACTGGGCTTCCAACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405440.7
CDS CAA 72 bp ACATTCTTCCTCTTTCCTCTTGGTACAATGGTAAATTaGGCTATGCTCCTGGGGCAGTGGGTATGGGTTGGG +
Preference number: 6 (lower is better)
Translates to: TFFLFPLGTMVN*AMLLGQWVWVG
Trigger: CCCAACCCATACCCACTGCCCCAGGAGCATAGCCAAATTTACCATTGTACCAAGAGGAAAGAGGAAGAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS TCA 72 bp ATAGCTAGAGCGGTAGAAGGAATCTTCTTCACTGGGTaGTGTCTCCATGTAGGGCTTCTTATAGGGATGGTC +
Preference number: 6 (lower is better)
Translates to: IARAVEGIFFTG*CLHVGLLIGMV
Trigger: GACCATCCCTATAAGAAGCCCTACATGGAGACATCACCCAGTGAAGAAGATTCCTTCTACCGCTCTAGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS CCA 72 bp TCTCCATGTAGGGCTTCTTATAGGGATGGTCTGTGGTaGAACATTCTTCCTCTTTCCTCTTGGTACAATGGT +
Preference number: 6 (lower is better)
Translates to: SPCRASYRDGLW*NILPLSSWYNG
Trigger: ACCATTGTACCAAGAGGAAAGAGGAAGAATGTTCCACCACAGACCATCCCTATAAGAAGCCCTACATGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
CDS CAA 72 bp GTCTGTCAAGAAGAGCACGTACCTCCCAGCTCAAGGTaGGTTTGTGGTCTCCGACAAATTAAATATTACTGT +
Preference number: 6 (lower is better)
Translates to: VCQEEHVPPSSR*VCGLRQIKYYC
Trigger: ACAGTAATATTTAATTTGTCGGAGACCACAAACCAACCTTGAGCTGGGAGGTACGTGCTCTTCTTGACAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS CCA 72 bp TCTGTCAAGAAGAGCACGTACCTCCCAGCTCAAGGTTaGTTTGTGGTCTCCGACAAATTAAATATTACTGTT +
Preference number: 6 (lower is better)
Translates to: SVKKSTYLPAQG*FVVSDKLNITV
Trigger: AACAGTAATATTTAATTTGTCGGAGACCACAAACCAACCTTGAGCTGGGAGGTACGTGCTCTTCTTGACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS CAA 90 bp TCTTCCAACGTCTGTCAAGAAGAGCACGTACCTCCCAGCTCAAGGTaGGTTTGTGGTCTCCGACAAATTAAATATTACTGTTTATTACCA +
Preference number: 6 (lower is better)
Translates to: SSNVCQEEHVPPSSR*VCGLRQIKYYCLLP
Trigger: TGGTAATAAACAGTAATATTTAATTTGTCGGAGACCACAAACCAACCTTGAGCTGGGAGGTACGTGCTCTTCTTGACAGACGTTGGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310346.8
ENST00000349716.9
CDS TCA 72 bp GTCACAGACCATTTATTATCTGCGAATTTGTATCTGTaGTCGTCGGCAGGTACAATGTCCATGAGAAGAATG +
Preference number: 6 (lower is better)
Translates to: VTDHLLSANLYL*SSAGTMSMRRM
Trigger: CATTCTTCTCATGGACATTGTACCTGCCGACGATCACAGATACAAATTCGCAGATAATAAATGGTCTGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310346.8
ENST00000349716.9
ENST00000405440.7
ENST00000526441.1
ENST00000552726.1