RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBX4 (Homo sapiens)

Ensembl gene IDs: ENSG00000121075

Ensembl transcript IDs: ENST00000240335.1, ENST00000586874.2, ENST00000589003.5, ENST00000589449.5, ENST00000590174.5, ENST00000593249.5, ENST00000642491.1, ENST00000644296.1

Found 316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTaGTACCAAAACCAGATTCTCAGCTCCCCTTGCAAAGAGAAGGCC +
Preference number: 1 (lower is better)
Translates to: QAVSQTLQKSKEWAS*YQNQILSSPCKEKA
Trigger: GGCCTTCTCTTTGCAAGGGGAGCTGAGAATCTGGTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
3UTR CCA 90 bp CCCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTaGGCCTCCTGCTACCAAAACCAGATTCTCAGCTCCCCTTGCAAA +
Preference number: 1 (lower is better)
Translates to: PTSQAVSQTLQKSKE*ASCYQNQILSSPCK
Trigger: TTTGCAAGGGGAGCTGAGAATCTGGTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
3UTR CCA 90 bp CCCAAGTTTGATGGAGAGTTCACCCCAGCCACACTGATGGCCTGGTaGTATTCAATGCTAAAACGCAGGGCTGAGGACTTTGTGAGCGCC +
Preference number: 1 (lower is better)
Translates to: PKFDGEFTPATLMAW*YSMLKRRAEDFVSA
Trigger: GGCGCTCACAAAGTCCTCAGCCCTGCGTTTTAGCATTGAATACCACCAGGCCATCAGTGTGGCTGGGGTGAACTCTCCATCAAACTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644296.1
3UTR GCA 90 bp CACACACACACACACTGGAATACCTTCCTGTGTTTCTTGGTAGAGTaGAGGCCACCCACAGAGGTTAATACTGGAGCAACACGGTCCCGG +
Preference number: 1 (lower is better)
Translates to: HTHTHWNTFLCFLVE*RPPTEVNTGATRSR
Trigger: CCGGGACCGTGTTGCTCCAGTATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCAGTGTGTGTGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
3UTR TCA 90 bp AGCCACACTGATGGCCTGGTGGTATTCAATGCTAAAACGCAGGGCTaGGGACTTTGTGAGCGCCACACTGGAGAATTCTCTTTGCTCCTC +
Preference number: 1 (lower is better)
Translates to: SHTDGLVVFNAKTQG*GLCERHTGEFSLLL
Trigger: GAGGAGCAAAGAGAATTCTCCAGTGTGGCGCTCACAAAGTCCTCAGCCCTGCGTTTTAGCATTGAATACCACCAGGCCATCAGTGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644296.1
3UTR CCA 90 bp TTTCCCAAGTTTGATGGAGAGTTCACCCCAGCCACACTGATGGCCTaGTGGTATTCAATGCTAAAACGCAGGGCTGAGGACTTTGTGAGC +
Preference number: 1 (lower is better)
Translates to: FPKFDGEFTPATLMA*WYSMLKRRAEDFVS
Trigger: GCTCACAAAGTCCTCAGCCCTGCGTTTTAGCATTGAATACCACCAGGCCATCAGTGTGGCTGGGGTGAACTCTCCATCAAACTTGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644296.1
3UTR TCA 90 bp ACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTAGCTaGGCCCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAA +
Preference number: 1 (lower is better)
Translates to: TEQPAVLSKYTLWLS*AHLSGSLTDSPEVK
Trigger: TTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGGGCTCAGCTAAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
3UTR-3UTR CCA 90 bp GAGCCCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCAGAGAACTCCCCACCTaGCCCCTGAGTAAATCAACC +
Preference number: 2 (lower is better)
Translates to: EPTSQAVSQTLQKSKEWARELPT*PLSKST
Trigger: GGTTGATTTACTCAGGGGCCAGGTGGGGAGTTCTCT...GGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
3UTR-3UTR CCA 90 bp CCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTGAGAATCTTTCCCCATaGGAGAGAACTCCCCACCTG +
Preference number: 2 (lower is better)
Translates to: PPLRQSHRLSRSQRSGPPENLSP*ERTPHL
Trigger: CAGGTGGGGAGTTCTCTCCCATGGGGAAAGATTCTC...AGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
3UTR-3UTR GCA 90 bp CCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTTGTTTCTTGGTAGAGTaGAGGCCACCCACAGAGGTT +
Preference number: 2 (lower is better)
Translates to: PPLRQSHRLSRSQRSGPPCFLVE*RPPTEV
Trigger: AACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACA...AGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
3UTR-3UTR TCA 90 bp CTAGGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTATTCCCACCCCAGCAGTaGGAATCTTTCCCCATGGGA +
Preference number: 2 (lower is better)
Translates to: LGHSLSSQLYYQSTHCGLFPPQQ*ESFPMG
Trigger: TCCCATGGGGAAAGATTCTCACTGCTGGGGTGGGAA...TAAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
3UTR-3UTR GCA 90 bp GGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTAGCTAGGAACTCTAAGGTGTaGACAGAGTCCTCACACCCC +
Preference number: 2 (lower is better)
Translates to: GHSLSSQLYYQSTHCGLARNSKV*TESSHP
Trigger: GGGGTGTGAGGACTCTGTGCACACCTTAGAGTTCCT...AGCTAAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
3UTR-3UTR GCA 90 bp CACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCAGCCAAATGTTTCTTGGTAGAGTaGAGGCCACCCACAGAGGTT +
Preference number: 2 (lower is better)
Translates to: HGHVKRCQITIDPGPAAKCFLVE*RPPTEV
Trigger: AACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACA...TTTGGCTGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
3UTR-3UTR GCA 90 bp GGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTAGCTAAGGAGTGGGCCTCCTaGTACCAAAACCAGATTCTC +
Preference number: 2 (lower is better)
Translates to: GHSLSSQLYYQSTHCGLAKEWAS*YQNQIL
Trigger: GAGAATCTGGTTTTGGTAGCAGGAGGCCCACTCCTT...AGCTAAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
3UTR CAA 90 bp ACACACACACACACACACACACACTGGAATACCTTCCTGTGTTTCTaGGTAGAGTGCAGGCCACCCACAGAGGTTAATACTGGAGCAACA +
Preference number: 2 (lower is better)
Translates to: THTHTHTHWNTFLCF*VECRPPTEVNTGAT
Trigger: TGTTGCTCCAGTATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCAGTGTGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
3UTR-3UTR CCA 90 bp CAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTGCTACCAAAACCAGATTCTCCACACACACACACACTaGAATACCTTCCTGTGTTTC +
Preference number: 2 (lower is better)
Translates to: QTLQKSKEWASCYQNQILHTHTH*NTFLCF
Trigger: GAAACACAGGAAGGTATTCCAGTGTGTGTGTGTGTG...GAGAATCTGGTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
3UTR-3UTR CCA 90 bp TCTAGGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTCAGAAGTCAAAGGAGTaGGCCTCCTGCTACCAAAAC +
Preference number: 2 (lower is better)
Translates to: SRPLTEQPAVLSKYTLWLQKSKE*ASCYQN
Trigger: GTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTG...AAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
3UTR-3UTR GCA 90 bp CAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTGCTACCAAAACCAGATTCTCATGTCAGAAGATGGATaGTCTCCAAATACATACATG +
Preference number: 2 (lower is better)
Translates to: QTLQKSKEWASCYQNQILMSEDG*SPNTYM
Trigger: CATGTATGTATTTGGAGAGCATCCATCTTCTGACAT...GAGAATCTGGTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
3UTR-3UTR CAA 90 bp TGCAGATGGTATGGTGCCTGGGAGGCTGACTCTCCACACACCAGAGTGAGAGACACCTTCCTGTGTTTCTaGGTAGAGTGCAGGCCACCC +
Preference number: 3 (lower is better)
Translates to: CRWYGAWEADSPHTRVRDTFLCF*VECRPP
Trigger: GGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGT...GTCTCTCACTCTGGTGTGTGGAGAGTCAGCCTCCCAGGCACCATACCATCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644296.1
3UTR GCA 72 bp TCCCCTTGCAAAGAGAAGGCCAGGAACTCTAAGGTGTaGACAGAGTCCTCACACCCCAGCAGCGAGAATCTT +
Preference number: 3 (lower is better)
Translates to: SPCKEKARNSKV*TESSHPSSENL
Trigger: AAGATTCTCGCTGCTGGGGTGTGAGGACTCTGTGCACACCTTAGAGTTCCTGGCCTTCTCTTTGCAAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
3UTR CCA 72 bp TTGCCCATCATCATAGGATGCAGATGGTATGGTGCCTaGGAGGCTGACTCTCCACACACCAGAGTGAGAGAC +
Preference number: 3 (lower is better)
Translates to: LPIIIGCRWYGA*EADSPHTRVRD
Trigger: GTCTCTCACTCTGGTGTGTGGAGAGTCAGCCTCCCAGGCACCATACCATCTGCATCCTATGATGATGGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644296.1
3UTR-3UTR CAA 90 bp CAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTGCTACCAAAACCAGATTCTCACCTTCCTGTGTTTCTaGGTAGAGTGCAGGCCACCC +
Preference number: 3 (lower is better)
Translates to: QTLQKSKEWASCYQNQILTFLCF*VECRPP
Trigger: GGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGT...GAGAATCTGGTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
3UTR CCA 72 bp GATGGAGAGTTCACCCCAGCCACACTGATGGCCTGGTaGTATTCAATGCTAAAACGCAGGGCTGAGGACTTT +
Preference number: 3 (lower is better)
Translates to: DGEFTPATLMAW*YSMLKRRAEDF
Trigger: AAAGTCCTCAGCCCTGCGTTTTAGCATTGAATACCACCAGGCCATCAGTGTGGCTGGGGTGAACTCTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644296.1
3UTR CCA 72 bp TTTGATGGAGAGTTCACCCCAGCCACACTGATGGCCTaGTGGTATTCAATGCTAAAACGCAGGGCTGAGGAC +
Preference number: 3 (lower is better)
Translates to: FDGEFTPATLMA*WYSMLKRRAED
Trigger: GTCCTCAGCCCTGCGTTTTAGCATTGAATACCACCAGGCCATCAGTGTGGCTGGGGTGAACTCTCCATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644296.1
3UTR TCA 72 bp GATGGCCTGGTGGTATTCAATGCTAAAACGCAGGGCTaGGGACTTTGTGAGCGCCACACTGGAGAATTCTCT +
Preference number: 3 (lower is better)
Translates to: DGLVVFNAKTQG*GLCERHTGEFS
Trigger: AGAGAATTCTCCAGTGTGGCGCTCACAAAGTCCTCAGCCCTGCGTTTTAGCATTGAATACCACCAGGCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644296.1
3UTR GCA 72 bp TCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTaGTACCAAAACCAGATTCTCAGCTCCCCTTGCAAA +
Preference number: 3 (lower is better)
Translates to: SQTLQKSKEWAS*YQNQILSSPCK
Trigger: TTTGCAAGGGGAGCTGAGAATCTGGTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
3UTR TCA 72 bp CCCTTTAAAAATACCCCTCAGGTGACATTTAGCCCATaGCCCTTTCCGAACGTCATCCCTCAGACCTCAGAG +
Preference number: 3 (lower is better)
Translates to: PFKNTPQVTFSP*PFPNVIPQTSE
Trigger: CTCTGAGGTCTGAGGGATGACGTTCGGAAAGGGTCATGGGCTAAATGTCACCTGAGGGGTATTTTTAAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
3UTR GCA 72 bp ACACACTGGAATACCTTCCTGTGTTTCTTGGTAGAGTaGAGGCCACCCACAGAGGTTAATACTGGAGCAACA +
Preference number: 3 (lower is better)
Translates to: THWNTFLCFLVE*RPPTEVNTGAT
Trigger: TGTTGCTCCAGTATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCAGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
3UTR GCA 72 bp CCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATaGTCTCCAAATACATACATGCTCGTGTATACACAC +
Preference number: 3 (lower is better)
Translates to: PCHDLSCMSEDG*SPNTYMLVYTH
Trigger: GTGTGTATACACGAGCATGTATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
3UTR GCA 72 bp TGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTaGAGCCAAAATCACTTCTTAGATAAATGTGGTGTT +
Preference number: 3 (lower is better)
Translates to: CQEMSDNNRPRS*SQNHFLDKCGV
Trigger: AACACCACATTTATCTAAGAAGTGATTTTGGCTGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp GAGCCCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCGGGTCAGGGTCCAGCTaGCTGCCGTGCCCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: EPTSQAVSQTLQKSKEWAGSGSS*LPCPRG
Trigger: GCCCCGAGGGCACGGCAGGCAGCTGGACCCTGACCC...GGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR CCA 90 bp GAGCCCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCGGGCGTTGGCTGCGCTaGCCTCTCCGAGCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: EPTSQAVSQTLQKSKEWAGRWLR*PLRALG
Trigger: GCCCAGCGCTCGGAGAGGCCAGCGCAGCCAACGCCC...GGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR TCA 90 bp GAGCCCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCGCGCTCTCTTGGGAATaGGGCGCTGGGCCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: EPTSQAVSQTLQKSKEWAALSWE*GAGPPL
Trigger: GAGCGGGGGCCCAGCGCCTCATTCCCAAGAGAGCGC...GGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR TCA 90 bp TGCAGGCCACCCACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGACGGCTCCGCGAGCTGTaGGTGTGCCCCGTTCTCGTG +
Preference number: 4 (lower is better)
Translates to: CRPPTEVNTGATRSRGYGRLREL*VCPVLV
Trigger: CACGAGAACGGGGCACACTCACAGCTCGCGGAGCCG...TCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGTGGGTGGCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp TGCAGGCCACCCACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGAGGGTGGGAAAGGTGCTaGGGGGCAGGTCCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: CRPPTEVNTGATRSRGYGGWERC*GAGPAA
Trigger: AGCCGCAGGACCTGCCCCTCAGCACCTTTCCCACCC...TCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGTGGGTGGCCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp TGCAGGCCACCCACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGACTGAGGGGCAGGTCCTaGGGCTCCGCGAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: CRPPTEVNTGATRSRGYGLRGRS*GSASCE
Trigger: CTCACAGCTCGCGGAGCCGCAGGACCTGCCCCTCAG...TCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGTGGGTGGCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTTGCTGGAGTGCCTGGTaGGTGCCGAGCAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PPLRQSHRLSRSQRSGPPCWSAW*VPSRGP
Trigger: GGGCCCCCTGCTCGGCACCCACCAGGCACTCCAGCA...AGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CTGAGCCCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCGACTCCGCGCCGCTaGGTCAGGGTCCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LSPPLRQSHRLSRSQRSGPTPRR*VRVQLP
Trigger: AGGCAGCTGGACCCTGACCCAGCGGCGCGGAGTCGG...CCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGGGCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR CCA 90 bp CCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTACAGCTCAGCGGAGGTaGGGGCAGGTCGTCCACCCC +
Preference number: 4 (lower is better)
Translates to: PPLRQSHRLSRSQRSGPPTAQRR*GQVVHP
Trigger: GGGGTGGACGACCTGCCCCCACCTCCGCTGAGCTGT...AGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR TCA 90 bp ACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGAGGAGACGTGAGAGGGTGGGAAAGGTGCTaGGGGGCAGGTCCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: TEVNTGATRSRGYGGDVRGWERC*GAGPAA
Trigger: AGCCGCAGGACCTGCCCCTCAGCACCTTTCCCACCC...TCTCACGTCTCCTCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp CCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCAGCGCTCTCTTGGGAATaGGGCGCTGGGCCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: PTHGHVKRCQITIDPGPAALSWE*GAGPPL
Trigger: GAGCGGGGGCCCAGCGCCTCATTCCCAAGAGAGCGC...TGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp CCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCACGGCCCGAGGTCCCCTaGAGGTTCGGGTCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: PTHGHVKRCQITIDPGPARPEVP*RFGSEE
Trigger: CTCCTCGGACCCGAACCTGCAGGGGACCTCGGGCCG...TGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR CCA 90 bp ACACACTGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGCGGGCTCGGGGGCGTTaGCTGCGCTGGCCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: THWNTFLCFLVECRPPTERARGR*LRWPLR
Trigger: TCGGAGAGGCCAGCGCAGCCAACGCCCCCGAGCCCG...CTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCAGTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp GAGCCCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCGGTGTGGCTGAGAGCTaGGGGGAGATGAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: EPTSQAVSQTLQKSKEWAGVAES*GEMSLC
Trigger: GCAGAGGCTCATCTCCCCCCAGCTCTCAGCCACACC...GGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR TCA 90 bp AGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTGCTACCAAAACCAGGTGGCTGGGAGCTCTaGGCGGAGAGGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SLTDSPEVKGVGLLLPKPGGWEL*AERVGS
Trigger: GCTGCCCACCCTCTCCGCTCAGAGCTCCCAGCCACC...TGGTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR TCA 90 bp TGCAGGCCACCCACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGATGGTGCCTGGGAGGCTaGCTCTCCACACACCAGAGT +
Preference number: 4 (lower is better)
Translates to: CRPPTEVNTGATRSRGYGWCLGG*LSTHQS
Trigger: ACTCTGGTGTGTGGAGAGTCAGCCTCCCAGGCACCA...TCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGTGGGTGGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR GCA 90 bp TGCAGGCCACCCACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGATGGAAGGAGACCAGCTaGCGCATCCAGTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: CRPPTEVNTGATRSRGYGWKETS*RIQWAP
Trigger: AGGAGCCCACTGGATGCGGCAGCTGGTCTCCTTCCA...TCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGTGGGTGGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp CTGAGCCCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGGTGGTGGCGGTGAAGTaGGTGGGGAAGGGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: LSPPLRQSHRLSRSQRSGVVAVK*VGKGWY
Trigger: GTACCAGCCCTTCCCCACGCACTTCACCGCCACCAC...CCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR GCA 90 bp CAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTGCTACCAAAACCAGATTCTCCAGGGTCCAGCTGCCTaGCGTGCCCTCGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: QTLQKSKEWASCYQNQILQGPAA*RALGAG
Trigger: TCCAGCCCCGAGGGCACGGCAGGCAGCTGGACCCTG...GAGAATCTGGTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR CCA 90 bp CACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCAGCCAAAGGGCGTTGGCTGCGCTaGCCTCTCCGAGCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: HGHVKRCQITIDPGPAAKGRWLR*PLRALG
Trigger: GCCCAGCGCTCGGAGAGGCCAGCGCAGCCAACGCCC...TTTGGCTGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATACTGGAGCACGGGCTCGGGGGCGTTaGCTGCGCTGGCCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: FLCFLVECRPPTEVNTGARARGR*LRWPLR
Trigger: TCGGAGAGGCCAGCGCAGCCAACGCCCCCGAGCCCG...TGCTCCAGTATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TGCAGGCCACCCACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGATCCAGTGGGCTCCTGTaGCAGGAGAATCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: CRPPTEVNTGATRSRGYGSSGLL*QENPGG
Trigger: TCCACCCGGATTCTCCTGCCACAGGAGCCCACTGGA...TCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGTGGGTGGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TGCAGGCCACCCACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGATGCGTGGGGAAGGGCTaGTACGGCACAGTCTCCATC +
Preference number: 4 (lower is better)
Translates to: CRPPTEVNTGATRSRGYGCVGKG*YGTVSI
Trigger: GATGGAGACTGTGCCGTACCAGCCCTTCCCCACGCA...TCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGTGGGTGGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp ACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGAGGAGACGTGAGATTGGGAATGAGGCGCTaGGCCCCCGCTCTCGGACCT +
Preference number: 4 (lower is better)
Translates to: TEVNTGATRSRGYGGDVRLGMRR*APALGP
Trigger: AGGTCCGAGAGCGGGGGCCCAGCGCCTCATTCCCAA...TCTCACGTCTCCTCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TGCAGGCCACCCACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGATTCCTCTCACACCCTTaGGGGAGGCCGCGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: CRPPTEVNTGATRSRGYGFLSHP*GRPRSL
Trigger: AAGAGAGCGCGGCCTCCCCCAAGGGTGTGAGAGGAA...TCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGTGGGTGGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp CAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTGCTACCAAAACCAGATTCTCCGGCTCCGCGAGCTGTaGGTGTGCCCCGTTCTCGTG +
Preference number: 4 (lower is better)
Translates to: QTLQKSKEWASCYQNQILRLREL*VCPVLV
Trigger: CACGAGAACGGGGCACACTCACAGCTCGCGGAGCCG...GAGAATCTGGTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR GCA 90 bp ACACACTGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGATGTTCTCGATGGTCTaGTCCGCGGCGGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: THWNTFLCFLVECRPPTEMFSMV*SAAAAA
Trigger: CGCCGCCGCCGCCGCGGAGCAGACCATCGAGAACAT...CTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCAGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp TTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATACTGGAGCAAATTGCGGTGCCGCATaGGGAGGCGCCAGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: FLCFLVECRPPTEVNTGANCGAA*GGASGP
Trigger: CGGGCCGCTGGCGCCTCCGCATGCGGCACCGCAATT...TGCTCCAGTATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR CCA 90 bp TGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATCGGGCTCGGGGGCGTTaGCTGCGCTGGCCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: WNTFLCFLVECRPPTEVNRARGR*LRWPLR
Trigger: TCGGAGAGGCCAGCGCAGCCAACGCCCCCGAGCCCG...ATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCATCTGAGCGGAGAGGGTaGGCAGCCGCGGCATCATGG +
Preference number: 4 (lower is better)
Translates to: PTHGHVKRCQITIDPGPASERRG*AAAASW
Trigger: CCATGATGCCGCGGCTGCCCACCCTCTCCGCTCAGA...TGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp TTCTGTTGGCCTTTCTCGCTCCAGAAGCGTAGATTTTCTGAGAGCAGAACAGGCGGGTGGGAAAGGTGCTaGGGGGCAGGTCCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: FCWPFSLQKRRFSESRTGGWERC*GAGPAA
Trigger: AGCCGCAGGACCTGCCCCTCAGCACCTTTCCCACCC...GCCTGTTCTGCTCTCAGAAAATCTACGCTTCTGGAGCGAGAAAGGCCAACAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR TCA 90 bp CTAGGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTAGCGCTCTCTTGGGAATaGGGCGCTGGGCCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: LGHSLSSQLYYQSTHCGLALSWE*GAGPPL
Trigger: GAGCGGGGGCCCAGCGCCTCATTCCCAAGAGAGCGC...TAAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR GCA 90 bp CTGAGCCCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGTCCTGCAGCATCTCCTaGGGGCACAGCACACAACGA +
Preference number: 4 (lower is better)
Translates to: LSPPLRQSHRLSRSQRSGSCSIS*GHSTQR
Trigger: TCGTTGTGTGCTGTGCCCGCAGGAGATGCTGCAGGA...CCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGGGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240335.1
CDS-3UTR GCA 90 bp ACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGAGGAGACGTGAGATGGAAGGAGACCAGCTaGCGCATCCAGTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: TEVNTGATRSRGYGGDVRWKETS*RIQWAP
Trigger: AGGAGCCCACTGGATGCGGCAGCTGGTCTCCTTCCA...TCTCACGTCTCCTCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp GAGCCCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCACGGGGTATTCTTTaGTCTGCAGTCGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: EPTSQAVSQTLQKSKEWASRGIL*SAVGPH
Trigger: GTGTGGCCCGACTGCAGAGCAAAGAATACCCCGTGA...GGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR GCA 90 bp TTCTGTTGGCCTTTCTCGCTCCAGAAGCGTAGATTTTCTGAGAGCAGAACAGGCCTGAGGGGCAGGTCCTaGGGCTCCGCGAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: FCWPFSLQKRRFSESRTGLRGRS*GSASCE
Trigger: CTCACAGCTCGCGGAGCCGCAGGACCTGCCCCTCAG...GCCTGTTCTGCTCTCAGAAAATCTACGCTTCTGGAGCGAGAAAGGCCAACAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR GCA 90 bp ACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGAGGAGACGTGAGATGGGGGTCACCTCACTaGAGTAGGAGGGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TEVNTGATRSRGYGGDVRWGSPH*SRRGSA
Trigger: TGCTGAGCCCCTCCTACTGCAGTGAGGTGACCCCCA...TCTCACGTCTCCTCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp AGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTGCTACCAAAACCATCCAGCTGCCTGCCGTaGCCTCGGGGCTGGACACAT +
Preference number: 4 (lower is better)
Translates to: SLTDSPEVKGVGLLLPKPSSCLP*PRGWTH
Trigger: ATGTGTCCAGCCCCGAGGGCACGGCAGGCAGCTGGA...TGGTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR CCA 90 bp CTAGGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTATGCTGGAGTGCCTGGTaGGTGCCGAGCAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LGHSLSSQLYYQSTHCGLCWSAW*VPSRGP
Trigger: GGGCCCCCTGCTCGGCACCCACCAGGCACTCCAGCA...TAAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp ACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGAGGAGACGTGAGATTCCTCTCACACCCTTaGGGGAGGCCGCGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: TEVNTGATRSRGYGGDVRFLSHP*GRPRSL
Trigger: AAGAGAGCGCGGCCTCCCCCAAGGGTGTGAGAGGAA...TCTCACGTCTCCTCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp GAGCCCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCGAGCAGAACAGGCCCTaGAGATGCCAGACATCAGCT +
Preference number: 4 (lower is better)
Translates to: EPTSQAVSQTLQKSKEWAEQNRP*RCQTSA
Trigger: AGCTGATGTCTGGCATCTCCAGGGCCTGTTCTGCTC...GGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR TCA 90 bp TGCAGGCCACCCACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGAGTGATAGAAGAGGCTTaGGTCCCTCTGGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: CRPPTEVNTGATRSRGYGVIEEA*VPLGGK
Trigger: TTTCCCACCCAGAGGGACTCAAGCCTCTTCTATCAC...TCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGTGGGTGGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp CCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTTTCCCACCCCAGCAGTaGGAATCTTTCCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: PPLRQSHRLSRSQRSGPPFPPQQ*ESFPMG
Trigger: TCCCATGGGGAAAGATTCTCACTGCTGGGGTGGGAA...AGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR TCA 90 bp TGCAGATGGTATGGTGCCTGGGAGGCTGACTCTCCACACACCAGAGTGAGAGACTTCCCACCCCAGCAGTaGGAATCTTTCCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: CRWYGAWEADSPHTRVRDFPPQQ*ESFPMG
Trigger: TCCCATGGGGAAAGATTCTCACTGCTGGGGTGGGAA...GTCTCTCACTCTGGTGTGTGGAGAGTCAGCCTCCCAGGCACCATACCATCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR TCA 90 bp ACACACTGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTGGCCTCCTGGGGATaGTGCCAGCTGAGGCGTGTT +
Preference number: 4 (lower is better)
Translates to: THWNTFLCFLVECRPPTEVASWG*CQLRRV
Trigger: AACACGCCTCAGCTGGCATCATCCCCAGGAGGCCAC...CTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCAGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR GCA 90 bp ACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGAGGAGACGTGAGATCCTGCAGCATCTCCTaGGGGCACAGCACACAACGA +
Preference number: 4 (lower is better)
Translates to: TEVNTGATRSRGYGGDVRSCSIS*GHSTQR
Trigger: TCGTTGTGTGCTGTGCCCGCAGGAGATGCTGCAGGA...TCTCACGTCTCCTCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000642491.1
CDS-3UTR GCA 90 bp GAGCCCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCCAGAGCTCCTTCTCATaGAGCCCCACCTTGATGTTC +
Preference number: 4 (lower is better)
Translates to: EPTSQAVSQTLQKSKEWAQSSFS*SPTLMF
Trigger: GAACATCAAGGTGGGGCTGCATGAGAAGGAGCTCTG...GGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR GCA 90 bp CCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCATGGAAGGAGACCAGCTaGCGCATCCAGTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PTHGHVKRCQITIDPGPAWKETS*RIQWAP
Trigger: AGGAGCCCACTGGATGCGGCAGCTGGTCTCCTTCCA...TGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp ACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGAGGAGACGTGAGAGGGTATTCTTTGCTCTaGAGTCGGGCCACACGCAGG +
Preference number: 4 (lower is better)
Translates to: TEVNTGATRSRGYGGDVRGYSLL*SRATRR
Trigger: CCTGCGTGTGGCCCGACTGCAGAGCAAAGAATACCC...TCTCACGTCTCCTCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp TCTAGGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTCTGAGGGGCAGGTCCTaGGGCTCCGCGAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: SRPLTEQPAVLSKYTLWLLRGRS*GSASCE
Trigger: CTCACAGCTCGCGGAGCCGCAGGACCTGCCCCTCAG...AAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CTGAGCCCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGGACATACAGCCTTCCTaGCATGGCTGGCTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: LSPPLRQSHRLSRSQRSGDIQPS*HGWLSL
Trigger: AAGGCTGAGCCAGCCATGCCAGGAAGGCTGTATGTC...CCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGGGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCATCCAGTGGGCTCCTGTaGCAGGAGAATCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PTHGHVKRCQITIDPGPASSGLL*QENPGG
Trigger: TCCACCCGGATTCTCCTGCCACAGGAGCCCACTGGA...TGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp GAGCCCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCGATGAAGGAGGTCTCTaGGAACACGTGGGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: EPTSQAVSQTLQKSKEWADEGGL*EHVGAE
Trigger: TTCTGCACCCACGTGTTCCCAGAGACCTCCTTCATC...GGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CCACTCCCATCCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCGTGGGCATTTCCTGGTaGCTGGGAGCTCTGAGCGGA +
Preference number: 4 (lower is better)
Translates to: PLPSHPRACQEMSDNNRPVGISW*LGALSG
Trigger: TCCGCTCAGAGCTCCCAGCCACCAGGAAATGCCCAC...GGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGGATGGGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCAGTGGGCATTTCCTGGTaGCTGGGAGCTCTGAGCGGA +
Preference number: 4 (lower is better)
Translates to: PTHGHVKRCQITIDPGPAVGISW*LGALSG
Trigger: TCCGCTCAGAGCTCCCAGCCACCAGGAAATGCCCAC...TGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp GGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTAGCTTTGGGAATGAGGCGCTaGGCCCCCGCTCTCGGACCT +
Preference number: 4 (lower is better)
Translates to: GHSLSSQLYYQSTHCGLALGMRR*APALGP
Trigger: AGGTCCGAGAGCGGGGGCCCAGCGCCTCATTCCCAA...AGCTAAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TGCAGGCCACCCACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGAAGAGAACTCCCCACCTaGCCCCTGAGTAAATCAACC +
Preference number: 4 (lower is better)
Translates to: CRPPTEVNTGATRSRGYGRELPT*PLSKST
Trigger: GGTTGATTTACTCAGGGGCCAGGTGGGGAGTTCTCT...TCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGTGGGTGGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp GAGCCCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCGAGAATCTTTCCCCATaGGAGAGAACTCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: EPTSQAVSQTLQKSKEWAENLSP*ERTPHL
Trigger: CAGGTGGGGAGTTCTCTCCCATGGGGAAAGATTCTC...GGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp ACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGAGGAGACGTGAGACAAGGTAAGTCCAGGTaGCGGGTACCGTCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: TEVNTGATRSRGYGGDVRQGKSR*RVPSAR
Trigger: ACGAGCAGACGGTACCCGCCACCTGGACTTACCTTG...TCTCACGTCTCCTCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp ACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGAGGAGACGTGAGACATGCAGCCCCACCTTaGTGTTCTCGATGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: TEVNTGATRSRGYGGDVRHAAPP*CSRWSA
Trigger: AGCAGACCATCGAGAACATCAAGGTGGGGCTGCATG...TCTCACGTCTCCTCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp TGCAGGCCACCCACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGATGGGGTTCATGCCTGTaGCTTTTACCTTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: CRPPTEVNTGATRSRGYGWGSCL*LLPCSW
Trigger: CCAGCTACAAGGTAAAAGTCACAGGCATGAACCCCA...TCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGTGGGTGGCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp TTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATACTGGAGCATCATGGTGGTGGCGGTaGAGTGCGTGGGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: FLCFLVECRPPTEVNTGASWWWR*SAWGRA
Trigger: AGCCCTTCCCCACGCACTTCACCGCCACCACCATGA...TGCTCCAGTATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp ACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGAGGAGACGTGAGAGCTATGGAGGAGACGTaGGAGTCATCCGTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: TEVNTGATRSRGYGGDVRAMEET*ESSVSP
Trigger: TGGACTGACGGATGACTCTCACGTCTCCTCCATAGC...TCTCACGTCTCCTCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp ACACACTGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGACAGGCCCTTATCCTaGAGCATCTCCTGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: THWNTFLCFLVECRPPTEDRPLS*SISCGH
Trigger: GTGCCCGCAGGAGATGCTGCAGGATAAGGGCCTGTC...CTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCAGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000642491.1
CDS-3UTR GCA 90 bp CCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACCTCGGGGGCGTTGGCTaGGCTGGCCTCTCCGAGCGC +
Preference number: 4 (lower is better)
Translates to: PCHDLSCMSEDGCSPNTYLGGVG*AGLSER
Trigger: GCGCTCGGAGAGGCCAGCGCAGCCAACGCCCCCGAG...GTATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACTGGAATACCTTCCTGTGTTTCTTGGTATGTTCTCGATGGTCTaGTCCGCGGCGGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTLEYLPVFLGMFSMV*SAAAAA
Trigger: CGCCGCCGCCGCCGCGGAGCAGACCATCGAGAACAT...ACCAAGAAACACAGGAAGGTATTCCAGTGTGTGTGTGTGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp CTGAGCCCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGTGGCTCAGCCTTCCCTaGCACCATCCATTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: LSPPLRQSHRLSRSQRSGWLSLP*HHPFVV
Trigger: GACAACAAATGGATGGTGGCAGGGAAGGCTGAGCCA...CCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGGGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR GCA 90 bp CCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTCCAGATAGGATCGCTTaGAAGGTAAGTCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PPLRQSHRLSRSQRSGPPPDRIA*KVSPGG
Trigger: GCCACCTGGACTTACCTTGCAAGCGATCCTATCTGG...AGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR GCA 90 bp CAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTGCTACCAAAACCAGATTCTCTGGGGGTCACCTCACTaGAGTAGGAGGGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QTLQKSKEWASCYQNQILWGSPH*SRRGSA
Trigger: TGCTGAGCCCCTCCTACTGCAGTGAGGTGACCCCCA...GAGAATCTGGTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR GCA 90 bp CCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTAGGAACTCTAAGGTGTaGACAGAGTCCTCACACCCC +
Preference number: 4 (lower is better)
Translates to: PPLRQSHRLSRSQRSGPPRNSKV*TESSHP
Trigger: GGGGTGTGAGGACTCTGTGCACACCTTAGAGTTCCT...AGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR GCA 90 bp AGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTGCTACCAAAACCACAGCATCTCCCTAATTaGGGTGCCGCATGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: SLTDSPEVKGVGLLLPKPQHLPN*GAACGG
Trigger: GCCTCCGCATGCGGCACCGCAATTAGGGAGATGCTG...TGGTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR CCA 90 bp CCACTCCCATCCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCGCAGGAGAATCCGGGTaGACATACAGCCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PLPSHPRACQEMSDNNRPAGESG*TYSLPG
Trigger: GCCAGGAAGGCTGTATGTCCACCCGGATTCTCCTGC...GGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGGATGGGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp ACACACTGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGTCCAGTGGGCTCCTGTaGCAGGAGAATCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: THWNTFLCFLVECRPPTESSGLL*QENPGG
Trigger: TCCACCCGGATTCTCCTGCCACAGGAGCCCACTGGA...CTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCAGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTGAGTTGAGGATGATATaGCCAAAGGGGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PPLRQSHRLSRSQRSGPPELRMI*PKGSRW
Trigger: CCACCTGGACCCCTTTGGCCATATCATCCTCAACTC...AGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp GGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTAGCTGGTGTGGCTGAGAGCTaGGGGGAGATGAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GHSLSSQLYYQSTHCGLAGVAES*GEMSLC
Trigger: GCAGAGGCTCATCTCCCCCCAGCTCTCAGCCACACC...AGCTAAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATTCTGAGCGGAGAGGGTaGGCAGCCGCGGCATCATGG +
Preference number: 4 (lower is better)
Translates to: WNTFLCFLVECRPPTEVNSERRG*AAAASW
Trigger: CCATGATGCCGCGGCTGCCCACCCTCTCCGCTCAGA...ATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCAACGGTCCCGGGGCTATaGAGGAGACGTGAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: PTHGHVKRCQITIDPGPATVPGL*RRRESH
Trigger: ATGACTCTCACGTCTCCTCCATAGCCCCGGGACCGT...TGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CCACTCCCATCCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCACGGTCCCGGGGCTATaGAGGAGACGTGAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: PLPSHPRACQEMSDNNRPTVPGL*RRRESH
Trigger: ATGACTCTCACGTCTCCTCCATAGCCCCGGGACCGT...GGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGGATGGGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp ACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGAGGAGACGTGAGAGGTGTACGGCGACACTaGAGTCCACATGTTACAGCT +
Preference number: 4 (lower is better)
Translates to: TEVNTGATRSRGYGGDVRGVRRH*SPHVTA
Trigger: AGCTGTAACATGTGGACTTCAGTGTCGCCGTACACC...TCTCACGTCTCCTCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp CCACTCCCATCCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCGCTATGGAGGAGACGTaGGAGTCATCCGTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: PLPSHPRACQEMSDNNRPAMEET*ESSVSP
Trigger: TGGACTGACGGATGACTCTCACGTCTCCTCCATAGC...GGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGGATGGGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp TTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATACTGGAGCAGACAGGCCCTTATCCTaGAGCATCTCCTGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: FLCFLVECRPPTEVNTGADRPLS*SISCGH
Trigger: GTGCCCGCAGGAGATGCTGCAGGATAAGGGCCTGTC...TGCTCCAGTATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000642491.1
CDS-3UTR GCA 90 bp CAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTGCTACCAAAACCAGATTCTCGGGTATTCTTTGCTCTaGAGTCGGGCCACACGCAGG +
Preference number: 4 (lower is better)
Translates to: QTLQKSKEWASCYQNQILGYSLL*SRATRR
Trigger: CCTGCGTGTGGCCCGACTGCAGAGCAAAGAATACCC...GAGAATCTGGTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATACTGGAGCATCGGTGCCCGCCTCGTaGAACTTCTTCCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: FLCFLVECRPPTEVNTGASVPAS*NFFQSS
Trigger: GGAGCTCTGGAAGAAGTTCCACGAGGCGGGCACCGA...TGCTCCAGTATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TGCAGATGGTATGGTGCCTGGGAGGCTGACTCTCCACACACCAGAGTGAGAGACGTCTCTGGGAACACGTaGGTGCAGAAAGCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: CRWYGAWEADSPHTRVRDVSGNT*VQKAVF
Trigger: AAACACTGCTTTCTGCACCCACGTGTTCCCAGAGAC...GTCTCTCACTCTGGTGTGTGGAGAGTCAGCCTCCCAGGCACCATACCATCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR CCA 90 bp ACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGAGGAGACGTGAGAGATGAAGGAGGTCTCTaGGAACACGTGGGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: TEVNTGATRSRGYGGDVRDEGGL*EHVGAE
Trigger: TTCTGCACCCACGTGTTCCCAGAGACCTCCTTCATC...TCTCACGTCTCCTCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACTGCTGGAGTGCCTGGTaGGTGCCGAGCAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PCHDLSCMSEDGCSPNTYCWSAW*VPSRGP
Trigger: GGGCCCCCTGCTCGGCACCCACCAGGCACTCCAGCA...GTATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CCACTCCCATCCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCCAAGGTAAGTCCAGGTaGCGGGTACCGTCTCGTCTT +
Preference number: 4 (lower is better)
Translates to: PLPSHPRACQEMSDNNRPQGKSR*RVPSRL
Trigger: AAGACGAGACGGTACCCGCCACCTGGACTTACCTTG...GGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGGATGGGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240335.1
CDS-3UTR CCA 90 bp CCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTACATACATGCTTCTCTaGGGGTCACCTCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: PPLRQSHRLSRSQRSGPPTYMLL*GSPHCS
Trigger: ACTGCAGTGAGGTGACCCCCAGAGAAGCATGTATGT...AGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATACTGGAGCATGCGTGGGGAAGGGCTaGTACGGCACAGTCTCCATC +
Preference number: 4 (lower is better)
Translates to: FLCFLVECRPPTEVNTGACVGKG*YGTVSI
Trigger: GATGGAGACTGTGCCGTACCAGCCCTTCCCCACGCA...TGCTCCAGTATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTATCATAGGATGCAGATaGTATGGTGCCTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PPLRQSHRLSRSQRSGPPIIGCR*YGAWEA
Trigger: AGCCTCCCAGGCACCATACCATCTGCATCCTATGAT...AGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR TCA 90 bp CCACTCCCATCCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCGGTGTACGGCGACACTaGAGTCCACATGTTACAGCT +
Preference number: 4 (lower is better)
Translates to: PLPSHPRACQEMSDNNRPGVRRH*SPHVTA
Trigger: AGCTGTAACATGTGGACTTCAGTGTCGCCGTACACC...GGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGGATGGGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACACTGGAATACCTTCCTGTGTTTCTTGGTTCATGGTGGTGGCGGTaGAGTGCGTGGGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTLEYLPVFLGSWWWR*SAWGRA
Trigger: AGCCCTTCCCCACGCACTTCACCGCCACCACCATGA...ACCAAGAAACACAGGAAGGTATTCCAGTGTGTGTGTGTGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp TTCCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATGGTGGCTGGGAGCTCTaGGCGGAGAGGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: FLVMTSVVCQKMDALQIHGGWEL*AERVGS
Trigger: GCTGCCCACCCTCTCCGCTCAGAGCTCCCAGCCACC...ATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp CCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCATGGCTCAGCCTTCCCTaGCACCATCCATTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: PTHGHVKRCQITIDPGPAWLSLP*HHPFVV
Trigger: GACAACAAATGGATGGTGGCAGGGAAGGCTGAGCCA...TGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp CACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCAGCCAAAGGGTATTCTTTGCTCTaGAGTCGGGCCACACGCAGG +
Preference number: 4 (lower is better)
Translates to: HGHVKRCQITIDPGPAAKGYSLL*SRATRR
Trigger: CCTGCGTGTGGCCCGACTGCAGAGCAAAGAATACCC...TTTGGCTGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp CCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCACCAGATAGGATCGCTTaGAAGGTAAGTCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PTHGHVKRCQITIDPGPAPDRIA*KVSPGG
Trigger: GCCACCTGGACTTACCTTGCAAGCGATCCTATCTGG...TGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp TGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATTGGGGGTCACCTCACTaGAGTAGGAGGGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: WNTFLCFLVECRPPTEVNWGSPH*SRRGSA
Trigger: TGCTGAGCCCCTCCTACTGCAGTGAGGTGACCCCCA...ATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp CCACTCCCATCCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCCTGGAGAATTCTCTTTaGTCCTCTGAGCTCACCGGC +
Preference number: 4 (lower is better)
Translates to: PLPSHPRACQEMSDNNRPLENSL*SSELTG
Trigger: GCCGGTGAGCTCAGAGGAGCAAAGAGAATTCTCCAG...GGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGGATGGGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR CCA 90 bp TGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATTCGGTGCCCGCCTCGTaGAACTTCTTCCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: WNTFLCFLVECRPPTEVNSVPAS*NFFQSS
Trigger: GGAGCTCTGGAAGAAGTTCCACGAGGCGGGCACCGA...ATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATACTGGAGCAGCAGGAGAATCCGGGTaGACATACAGCCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: FLCFLVECRPPTEVNTGAAGESG*TYSLPG
Trigger: GCCAGGAAGGCTGTATGTCCACCCGGATTCTCCTGC...TGCTCCAGTATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp GGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTAGCTGCAGGAGAATCCGGGTaGACATACAGCCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GHSLSSQLYYQSTHCGLAAGESG*TYSLPG
Trigger: GCCAGGAAGGCTGTATGTCCACCCGGATTCTCCTGC...AGCTAAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACTGGAATACCTTCCTGTGTTTCTTGGTGGTGTGGCTGAGAGCTaGGGGGAGATGAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTLEYLPVFLGGVAES*GEMSLC
Trigger: GCAGAGGCTCATCTCCCCCCAGCTCTCAGCCACACC...ACCAAGAAACACAGGAAGGTATTCCAGTGTGTGTGTGTGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCAGCCAAAAGGCTTGAGTCCCTCTaGGTGGGAAAGGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: HGHVKRCQITIDPGPAAKRLESL*VGKVLR
Trigger: CCTCAGCACCTTTCCCACCCAGAGGGACTCAAGCCT...TTTGGCTGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACACAGCTCAGCGGAGGTaGGGGCAGGTCGTCCACCCC +
Preference number: 4 (lower is better)
Translates to: PCHDLSCMSEDGCSPNTYTAQRR*GQVVHP
Trigger: GGGGTGGACGACCTGCCCCCACCTCCGCTGAGCTGT...GTATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CTAGGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTAGTGGGCATTTCCTGGTaGCTGGGAGCTCTGAGCGGA +
Preference number: 4 (lower is better)
Translates to: LGHSLSSQLYYQSTHCGLVGISW*LGALSG
Trigger: TCCGCTCAGAGCTCCCAGCCACCAGGAAATGCCCAC...TAAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TGCAGGCCACCCACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGACACACACACACACACTaGAATACCTTCCTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: CRPPTEVNTGATRSRGYGHTHTH*NTFLCF
Trigger: GAAACACAGGAAGGTATTCCAGTGTGTGTGTGTGTG...TCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGTGGGTGGCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCAAGAGAACTCCCCACCTaGCCCCTGAGTAAATCAACC +
Preference number: 4 (lower is better)
Translates to: PTHGHVKRCQITIDPGPARELPT*PLSKST
Trigger: GGTTGATTTACTCAGGGGCCAGGTGGGGAGTTCTCT...TGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTGCTACCAAAACCAGATTCTCAGATGGTATGGTGCCTaGGAGGCTGACTCTCCACAC +
Preference number: 4 (lower is better)
Translates to: QTLQKSKEWASCYQNQILRWYGA*EADSPH
Trigger: GTGTGGAGAGTCAGCCTCCCAGGCACCATACCATCT...GAGAATCTGGTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR TCA 90 bp TTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATACTGGAGCACATGCAGCCCCACCTTaGTGTTCTCGATGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: FLCFLVECRPPTEVNTGAHAAPP*CSRWSA
Trigger: AGCAGACCATCGAGAACATCAAGGTGGGGCTGCATG...TGCTCCAGTATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp CCACTCCCATCCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCTGGGGTTCATGCCTGTaGCTTTTACCTTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: PLPSHPRACQEMSDNNRPWGSCL*LLPCSW
Trigger: CCAGCTACAAGGTAAAAGTCACAGGCATGAACCCCA...GGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGGATGGGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp ACACACTGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTGATAGAAGAGGCTTaGGTCCCTCTGGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: THWNTFLCFLVECRPPTEVIEEA*VPLGGK
Trigger: TTTCCCACCCAGAGGGACTCAAGCCTCTTCTATCAC...CTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCAGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp AGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACATGCTCGTGTATACAGGTGGCTGGGAGCTCTaGGCGGAGAGGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SCMSEDGCSPNTYMLVYTGGWEL*AERVGS
Trigger: GCTGCCCACCCTCTCCGCTCAGAGCTCCCAGCCACC...TGTATACACGAGCATGTATGTATTTGGAGAGCATCCATCTTCTGACATACAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp TTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATACTGGAGCATTCCCACCCCAGCAGTaGGAATCTTTCCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: FLCFLVECRPPTEVNTGAFPPQQ*ESFPMG
Trigger: TCCCATGGGGAAAGATTCTCACTGCTGGGGTGGGAA...TGCTCCAGTATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp ACACACTGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGGGGATGATGCCAGCTaGGGCGTGTTTCATAATTGC +
Preference number: 4 (lower is better)
Translates to: THWNTFLCFLVECRPPTEGDDAS*GVFHNC
Trigger: GCAATTATGAAACACGCCTCAGCTGGCATCATCCCC...CTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCAGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR TCA 90 bp TGCAGATGGTATGGTGCCTGGGAGGCTGACTCTCCACACACCAGAGTGAGAGACTCTGAGCTCACCGGCTaGATTTACTGGAAGAAACAA +
Preference number: 4 (lower is better)
Translates to: CRWYGAWEADSPHTRVRDSELTG*IYWKKQ
Trigger: TTGTTTCTTCCAGTAAATTCAGCCGGTGAGCTCAGA...GTCTCTCACTCTGGTGTGTGGAGAGTCAGCCTCCCAGGCACCATACCATCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR GCA 90 bp TTCCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATATGTTCTCGATGGTCTaGTCCGCGGCGGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: FLVMTSVVCQKMDALQIHMFSMV*SAAAAA
Trigger: CGCCGCCGCCGCCGCGGAGCAGACCATCGAGAACAT...ATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp ACACACTGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGCAGAGCTCCTTCTCATaGAGCCCCACCTTGATGTTC +
Preference number: 4 (lower is better)
Translates to: THWNTFLCFLVECRPPTEQSSFS*SPTLMF
Trigger: GAACATCAAGGTGGGGCTGCATGAGAAGGAGCTCTG...CTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCAGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp AGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTGCTACCAAAACCACAGAGCTCCTTCTCATaGAGCCCCACCTTGATGTTC +
Preference number: 4 (lower is better)
Translates to: SLTDSPEVKGVGLLLPKPQSSFS*SPTLMF
Trigger: GAACATCAAGGTGGGGCTGCATGAGAAGGAGCTCTG...TGGTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR GCA 90 bp CACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCAGCCAAAGGTCACTGTCATCACTaGCCCGGAATCCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: HGHVKRCQITIDPGPAAKGHCHH*PGIPWQ
Trigger: TTGCCAAGGGATTCCGGGGCAGTGATGACAGTGACC...TTTGGCTGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp CCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCAGGGGAGATGAGCCTCTaGCTCATGATGCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: PTHGHVKRCQITIDPGPAGEMSL*LMMLLE
Trigger: TTCCAAAAGCATCATGAGGCAGAGGCTCATCTCCCC...TGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp CCACTCCCATCCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCTGTTTCTTGGTAGAGTaGAGGCCACCCACAGAGGTT +
Preference number: 4 (lower is better)
Translates to: PLPSHPRACQEMSDNNRPCFLVE*RPPTEV
Trigger: AACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACA...GGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGGATGGGAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp CCACTCCCATCCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCCCCATCATCATAGGATaGAGATGGTATGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PLPSHPRACQEMSDNNRPPIIIG*RWYGAW
Trigger: CCAGGCACCATACCATCTGCATCCTATGATGATGGG...GGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGGATGGGAGTGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR GCA 90 bp GGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTAGCTAACAGGCCCTGGAGATaGCAGACATCAGCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: GHSLSSQLYYQSTHCGLANRPWR*QTSAPV
Trigger: CACTGGAGCTGATGTCTGGCATCTCCAGGGCCTGTT...AGCTAAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR CCA 90 bp TTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATACTGGAGCAGACATACAGCCTTCCTaGCATGGCTGGCTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: FLCFLVECRPPTEVNTGADIQPS*HGWLSL
Trigger: AAGGCTGAGCCAGCCATGCCAGGAAGGCTGTATGTC...TGCTCCAGTATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATACTGGAGCATCAGCCTTAACGATGTaGAGCCGCGGCTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: FLCFLVECRPPTEVNTGASALTM*SRGWYL
Trigger: CAAGTACCAGCCGCGGCTCCACATCGTTAAGGCTGA...TGCTCCAGTATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCAGTCTCTGGGAACACGTaGGTGCAGAAAGCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: PTHGHVKRCQITIDPGPAVSGNT*VQKAVF
Trigger: AAACACTGCTTTCTGCACCCACGTGTTCCCAGAGAC...TGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATAGGCTTGAGTCCCTCTaGGTGGGAAAGGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: WNTFLCFLVECRPPTEVNRLESL*VGKVLR
Trigger: CCTCAGCACCTTTCCCACCCAGAGGGACTCAAGCCT...ATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TCTAGGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTAGGCTTGAGTCCCTCTaGGTGGGAAAGGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SRPLTEQPAVLSKYTLWLRLESL*VGKVLR
Trigger: CCTCAGCACCTTTCCCACCCAGAGGGACTCAAGCCT...AAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp ACACACTGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGTCTGCACGCTATAGCTaGTGTACGGCGACACTGAAG +
Preference number: 4 (lower is better)
Translates to: THWNTFLCFLVECRPPTESARYS*CTATLK
Trigger: CTTCAGTGTCGCCGTACACCAGCTATAGCGTGCAGA...CTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCAGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACTCTGAGCGGAGAGGGTaGGCAGCCGCGGCATCATGG +
Preference number: 4 (lower is better)
Translates to: PCHDLSCMSEDGCSPNTYSERRG*AAAASW
Trigger: CCATGATGCCGCGGCTGCCCACCCTCTCCGCTCAGA...GTATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCAGCCAAAAAAGTGGGCATTTCCTaGTGGCTGGGAGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: HGHVKRCQITIDPGPAAKKVGIS*WLGALS
Trigger: GCTCAGAGCTCCCAGCCACCAGGAAATGCCCACTTT...TTTGGCTGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp GGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTAGCTAAAGTGGGCATTTCCTaGTGGCTGGGAGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: GHSLSSQLYYQSTHCGLAKVGIS*WLGALS
Trigger: GCTCAGAGCTCCCAGCCACCAGGAAATGCCCACTTT...AGCTAAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACTTGGGAATGAGGCGCTaGGCCCCCGCTCTCGGACCT +
Preference number: 4 (lower is better)
Translates to: PCHDLSCMSEDGCSPNTYLGMRR*APALGP
Trigger: AGGTCCGAGAGCGGGGGCCCAGCGCCTCATTCCCAA...GTATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TGCAGGCCACCCACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGAGTCCCCATTCCTGAATaGTACTGTAAGGAAGATTCT +
Preference number: 4 (lower is better)
Translates to: CRPPTEVNTGATRSRGYGVPIPE*YCKEDS
Trigger: AGAATCTTCCTTACAGTACCATTCAGGAATGGGGAC...TCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGTGGGTGGCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTGCTACCAAAACCAGATTCTCAGAGAACTCCCCACCTaGCCCCTGAGTAAATCAACC +
Preference number: 4 (lower is better)
Translates to: QTLQKSKEWASCYQNQILRELPT*PLSKST
Trigger: GGTTGATTTACTCAGGGGCCAGGTGGGGAGTTCTCT...GAGAATCTGGTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp AGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTGCTACCAAAACCAGAGAATCTTTCCCCATaGGAGAGAACTCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: SLTDSPEVKGVGLLLPKPENLSP*ERTPHL
Trigger: CAGGTGGGGAGTTCTCTCCCATGGGGAAAGATTCTC...TGGTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATCAAGGTAAGTCCAGGTaGCGGGTACCGTCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: WNTFLCFLVECRPPTEVNQGKSR*RVPSAR
Trigger: ACGAGCAGACGGTACCCGCCACCTGGACTTACCTTG...ATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CTGAGCCCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGGCCACACTGATGGCCTaGTGGTATTCAATGCTAAAA +
Preference number: 4 (lower is better)
Translates to: LSPPLRQSHRLSRSQRSGATLMA*WYSMLK
Trigger: TTTTAGCATTGAATACCACCAGGCCATCAGTGTGGC...CCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR TCA 90 bp TTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATACTGGAGCAGGTGTACGGCGACACTaGAGTCCACATGTTACAGCT +
Preference number: 4 (lower is better)
Translates to: FLCFLVECRPPTEVNTGAGVRRH*SPHVTA
Trigger: AGCTGTAACATGTGGACTTCAGTGTCGCCGTACACC...TGCTCCAGTATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp CAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTGCTACCAAAACCAGATTCTCGTGACATTTAGCCCATaGCCCTTTCCGAACGTCATC +
Preference number: 4 (lower is better)
Translates to: QTLQKSKEWASCYQNQILVTFSP*PFPNVI
Trigger: GATGACGTTCGGAAAGGGTCATGGGCTAAATGTCAC...GAGAATCTGGTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR GCA 90 bp TTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATACTGGAGCATGGCTCAGCCTTCCCTaGCACCATCCATTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: FLCFLVECRPPTEVNTGAWLSLP*HHPFVV
Trigger: GACAACAAATGGATGGTGGCAGGGAAGGCTGAGCCA...TGCTCCAGTATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp CTAGGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTAGGTCACTGTCATCACTaGCCCGGAATCCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LGHSLSSQLYYQSTHCGLGHCHH*PGIPWQ
Trigger: TTGCCAAGGGATTCCGGGGCAGTGATGACAGTGACC...TAAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR GCA 90 bp ACACACTGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGGGGAGATGAGCCTCTaGCTCATGATGCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: THWNTFLCFLVECRPPTEGEMSL*LMMLLE
Trigger: TTCCAAAAGCATCATGAGGCAGAGGCTCATCTCCCC...CTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCAGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp CACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCAGCCAAAAGGAACTCTAAGGTGTaGACAGAGTCCTCACACCCC +
Preference number: 4 (lower is better)
Translates to: HGHVKRCQITIDPGPAAKRNSKV*TESSHP
Trigger: GGGGTGTGAGGACTCTGTGCACACCTTAGAGTTCCT...TTTGGCTGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp AGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTGCTACCAAAACCAAAGGAGTGGGCCTCCTaGTACCAAAACCAGATTCTC +
Preference number: 4 (lower is better)
Translates to: SLTDSPEVKGVGLLLPKPKEWAS*YQNQIL
Trigger: GAGAATCTGGTTTTGGTAGCAGGAGGCCCACTCCTT...TGGTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCATCAGCAGGATATACTTaGTCTTGGGGTTCATGCCTG +
Preference number: 4 (lower is better)
Translates to: PTHGHVKRCQITIDPGPASAGYT*SWGSCL
Trigger: CAGGCATGAACCCCAAGACCAAGTATATCCTGCTGA...TGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CTAGGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTATCAGCCTTAACGATGTaGAGCCGCGGCTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: LGHSLSSQLYYQSTHCGLSALTM*SRGWYL
Trigger: CAAGTACCAGCCGCGGCTCCACATCGTTAAGGCTGA...TAAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TCTAGGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTAAAGTGGGCATTTCCTaGTGGCTGGGAGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SRPLTEQPAVLSKYTLWLKVGIS*WLGALS
Trigger: GCTCAGAGCTCCCAGCCACCAGGAAATGCCCACTTT...AAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TGCAGATGGTATGGTGCCTGGGAGGCTGACTCTCCACACACCAGAGTGAGAGACGTCCCCATTCCTGAATaGTACTGTAAGGAAGATTCT +
Preference number: 4 (lower is better)
Translates to: CRWYGAWEADSPHTRVRDVPIPE*YCKEDS
Trigger: AGAATCTTCCTTACAGTACCATTCAGGAATGGGGAC...GTCTCTCACTCTGGTGTGTGGAGAGTCAGCCTCCCAGGCACCATACCATCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR CCA 90 bp TTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATACTGGAGCAGAGAATCTTTCCCCATaGGAGAGAACTCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: FLCFLVECRPPTEVNTGAENLSP*ERTPHL
Trigger: CAGGTGGGGAGTTCTCTCCCATGGGGAAAGATTCTC...TGCTCCAGTATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp ACACACTGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGTTCTCTTTGCTCCTCTaGGCTCACCGGCTGAATTTA +
Preference number: 4 (lower is better)
Translates to: THWNTFLCFLVECRPPTEFSLLL*AHRLNL
Trigger: TAAATTCAGCCGGTGAGCTCAGAGGAGCAAAGAGAA...CTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCAGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR TCA 90 bp GGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTAGCTGTGATTTCCCAAGTTTaGTGGAGAGTTCACCCCAGC +
Preference number: 4 (lower is better)
Translates to: GHSLSSQLYYQSTHCGLAVISQV*WRVHPS
Trigger: GCTGGGGTGAACTCTCCATCAAACTTGGGAAATCAC...AGCTAAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACTGGAATACCTTCCTGTGTTTCTTGGTTCACGGGGTATTCTTTaGTCTGCAGTCGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTLEYLPVFLGSRGIL*SAVGPH
Trigger: GTGTGGCCCGACTGCAGAGCAAAGAATACCCCGTGA...ACCAAGAAACACAGGAAGGTATTCCAGTGTGTGTGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp ACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGAGGAGACGTGAGAAGAGATGCTACTGGTTaGATTTTCCCTCCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: TEVNTGATRSRGYGGDVRRDATG*IFPPLE
Trigger: TTCAAGAGGAGGGAAAATGCAACCAGTAGCATCTCT...TCTCACGTCTCCTCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATGAGTTGAGGATGATATaGCCAAAGGGGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: WNTFLCFLVECRPPTEVNELRMI*PKGSRW
Trigger: CCACCTGGACCCCTTTGGCCATATCATCCTCAACTC...ATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CTGAGCCCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGAGAAAGCAGTGTTTTTaGAGCCGAAAGCATTGTTCT +
Preference number: 4 (lower is better)
Translates to: LSPPLRQSHRLSRSQRSGRKQCF*SRKHCS
Trigger: AGAACAATGCTTTCGGCTCCAAAAACACTGCTTTCT...CCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGGGCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TCTAGGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTGATGAAGGAGGTCTCTaGGAACACGTGGGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: SRPLTEQPAVLSKYTLWLDEGGL*EHVGAE
Trigger: TTCTGCACCCACGTGTTCCCAGAGACCTCCTTCATC...AAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATTCTGCACGCTATAGCTaGTGTACGGCGACACTGAAG +
Preference number: 4 (lower is better)
Translates to: WNTFLCFLVECRPPTEVNSARYS*CTATLK
Trigger: CTTCAGTGTCGCCGTACACCAGCTATAGCGTGCAGA...ATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp GGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTAGCTCAGAAGTCAAAGGAGTaGGCCTCCTGCTACCAAAAC +
Preference number: 4 (lower is better)
Translates to: GHSLSSQLYYQSTHCGLAQKSKE*ASCYQN
Trigger: GTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTG...AGCTAAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR TCA 90 bp AGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACATGCTCGTGTATACATCATGGTGGTGGCGGTaGAGTGCGTGGGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SCMSEDGCSPNTYMLVYTSWWWR*SAWGRA
Trigger: AGCCCTTCCCCACGCACTTCACCGCCACCACCATGA...TGTATACACGAGCATGTATGTATTTGGAGAGCATCCATCTTCTGACATACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp CCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACGCTAAAACGCAGGGCTaGGGACTTTGTGAGCGCCAC +
Preference number: 4 (lower is better)
Translates to: PCHDLSCMSEDGCSPNTYAKTQG*GLCERH
Trigger: GTGGCGCTCACAAAGTCCTCAGCCCTGCGTTTTAGC...GTATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR GCA 90 bp AGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACATGCTCGTGTATACAGTGGTGGCGGTGAAGTaGGTGGGGAAGGGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: SCMSEDGCSPNTYMLVYTVVAVK*VGKGWY
Trigger: GTACCAGCCCTTCCCCACGCACTTCACCGCCACCAC...TGTATACACGAGCATGTATGTATTTGGAGAGCATCCATCTTCTGACATACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp TGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATTGTTTCTTGGTAGAGTaGAGGCCACCCACAGAGGTT +
Preference number: 4 (lower is better)
Translates to: WNTFLCFLVECRPPTEVNCFLVE*RPPTEV
Trigger: AACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACA...ATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp TCTAGGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTAAGGAGTGGGCCTCCTaGTACCAAAACCAGATTCTC +
Preference number: 4 (lower is better)
Translates to: SRPLTEQPAVLSKYTLWLKEWAS*YQNQIL
Trigger: GAGAATCTGGTTTTGGTAGCAGGAGGCCCACTCCTT...AAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TTCCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATTCGGTGCCCGCCTCGTaGAACTTCTTCCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: FLVMTSVVCQKMDALQIHSVPAS*NFFQSS
Trigger: GGAGCTCTGGAAGAAGTTCCACGAGGCGGGCACCGA...ATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCAGCCAAATCAGCAGGATATACTTaGTCTTGGGGTTCATGCCTG +
Preference number: 4 (lower is better)
Translates to: HGHVKRCQITIDPGPAAKSAGYT*SWGSCL
Trigger: CAGGCATGAACCCCAAGACCAAGTATATCCTGCTGA...TTTGGCTGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATGTCTCTGGGAACACGTaGGTGCAGAAAGCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: WNTFLCFLVECRPPTEVNVSGNT*VQKAVF
Trigger: AAACACTGCTTTCTGCACCCACGTGTTCCCAGAGAC...ATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACTGGAATACCTTCCTGTGTTTCTTGGTTCTGCACGCTATAGCTaGTGTACGGCGACACTGAAG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTLEYLPVFLGSARYS*CTATLK
Trigger: CTTCAGTGTCGCCGTACACCAGCTATAGCGTGCAGA...ACCAAGAAACACAGGAAGGTATTCCAGTGTGTGTGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TTCCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATTGCGTGGGGAAGGGCTaGTACGGCACAGTCTCCATC +
Preference number: 4 (lower is better)
Translates to: FLVMTSVVCQKMDALQIHCVGKG*YGTVSI
Trigger: GATGGAGACTGTGCCGTACCAGCCCTTCCCCACGCA...ATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACACGGTCCCGGGGCTATaGAGGAGACGTGAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: PCHDLSCMSEDGCSPNTYTVPGL*RRRESH
Trigger: ATGACTCTCACGTCTCCTCCATAGCCCCGGGACCGT...GTATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATCAGAAGTCAAAGGAGTaGGCCTCCTGCTACCAAAAC +
Preference number: 4 (lower is better)
Translates to: WNTFLCFLVECRPPTEVNQKSKE*ASCYQN
Trigger: GTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTG...ATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
3UTR CAA 72 bp CACACACACACACACTGGAATACCTTCCTGTGTTTCTaGGTAGAGTGCAGGCCACCCACAGAGGTTAATACT +
Preference number: 4 (lower is better)
Translates to: HTHTHWNTFLCF*VECRPPTEVNT
Trigger: AGTATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCAGTGTGTGTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp TGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATAAAATACCCCTCAGGTaGCATTTAGCCCATGACCCT +
Preference number: 4 (lower is better)
Translates to: WNTFLCFLVECRPPTEVNKIPLR*HLAHDP
Trigger: AGGGTCATGGGCTAAATGTCACCTGAGGGGTATTTT...ATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR TCA 90 bp AGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTGCTACCAAAACCATGTGGCCTGCATTTGTaGGAGAGAGCGATATATAAT +
Preference number: 4 (lower is better)
Translates to: SLTDSPEVKGVGLLLPKPCGLHL*ERAIYN
Trigger: ATTATATATCGCTCTCTCTCACAAATGCAGGCCACA...TGGTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR GCA 90 bp CCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACTCACGGGGTATTCTTTaGTCTGCAGTCGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: PCHDLSCMSEDGCSPNTYSRGIL*SAVGPH
Trigger: GTGTGGCCCGACTGCAGAGCAAAGAATACCCCGTGA...GTATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACTGGAATACCTTCCTGTGTTTCTTGGTGGGGAGATGAGCCTCTaGCTCATGATGCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTLEYLPVFLGGEMSL*LMMLLE
Trigger: TTCCAAAAGCATCATGAGGCAGAGGCTCATCTCCCC...ACCAAGAAACACAGGAAGGTATTCCAGTGTGTGTGTGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACTGGAATACCTTCCTGTGTTTCTTGGTTGTTTCTTGGTAGAGTaGAGGCCACCCACAGAGGTT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTLEYLPVFLGCFLVE*RPPTEV
Trigger: AACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACA...ACCAAGAAACACAGGAAGGTATTCCAGTGTGTGTGTGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATTCAGCAGGATATACTTaGTCTTGGGGTTCATGCCTG +
Preference number: 4 (lower is better)
Translates to: WNTFLCFLVECRPPTEVNSAGYT*SWGSCL
Trigger: CAGGCATGAACCCCAAGACCAAGTATATCCTGCTGA...ATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACTCAGCCTTAACGATGTaGAGCCGCGGCTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: PCHDLSCMSEDGCSPNTYSALTM*SRGWYL
Trigger: CAAGTACCAGCCGCGGCTCCACATCGTTAAGGCTGA...GTATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CCACTCCCATCCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCTATCTTTATTTCTGTTaGCCTTTCTCGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PLPSHPRACQEMSDNNRPYLYFC*PFSLQK
Trigger: CTTCTGGAGCGAGAAAGGCCAACAGAAATAAAGATA...GGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGGATGGGAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR TCA 90 bp TTCCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATTCACCCCAGCCACACTaGTGGCCTGGTGGTATTCAA +
Preference number: 4 (lower is better)
Translates to: FLVMTSVVCQKMDALQIHSPQPH*WPGGIQ
Trigger: TTGAATACCACCAGGCCATCAGTGTGGCTGGGGTGA...ATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR CCA 90 bp GGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTAGCTAGTAGAGAAACTCATTaGCAGCATTTAGATGTGGCG +
Preference number: 4 (lower is better)
Translates to: GHSLSSQLYYQSTHCGLASRETH*QHLDVA
Trigger: CGCCACATCTAAATGCTGCCAATGAGTTTCTCTACT...AGCTAAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TCTAGGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTCACACACACACACACTaGAATACCTTCCTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: SRPLTEQPAVLSKYTLWLHTHTH*NTFLCF
Trigger: GAAACACAGGAAGGTATTCCAGTGTGTGTGTGTGTG...AAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR TCA 90 bp AGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACATGCTCGTGTATACACATGCAGCCCCACCTTaGTGTTCTCGATGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SCMSEDGCSPNTYMLVYTHAAPP*CSRWSA
Trigger: AGCAGACCATCGAGAACATCAAGGTGGGGCTGCATG...TGTATACACGAGCATGTATGTATTTGGAGAGCATCCATCTTCTGACATACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp AGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACATGCTCGTGTATACAGCTATGGAGGAGACGTaGGAGTCATCCGTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: SCMSEDGCSPNTYMLVYTAMEET*ESSVSP
Trigger: TGGACTGACGGATGACTCTCACGTCTCCTCCATAGC...TGTATACACGAGCATGTATGTATTTGGAGAGCATCCATCTTCTGACATACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp CCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACGTGACATTTAGCCCATaGCCCTTTCCGAACGTCATC +
Preference number: 4 (lower is better)
Translates to: PCHDLSCMSEDGCSPNTYVTFSP*PFPNVI
Trigger: GATGACGTTCGGAAAGGGTCATGGGCTAAATGTCAC...GTATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR GCA 90 bp TTCCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATAGGAACTCTAAGGTGTaGACAGAGTCCTCACACCCC +
Preference number: 4 (lower is better)
Translates to: FLVMTSVVCQKMDALQIHRNSKV*TESSHP
Trigger: GGGGTGTGAGGACTCTGTGCACACCTTAGAGTTCCT...ATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp AGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACATGCTCGTGTATACAGACATACAGCCTTCCTaGCATGGCTGGCTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: SCMSEDGCSPNTYMLVYTDIQPS*HGWLSL
Trigger: AAGGCTGAGCCAGCCATGCCAGGAAGGCTGTATGTC...TGTATACACGAGCATGTATGTATTTGGAGAGCATCCATCTTCTGACATACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCAGCCAAAAGAAAGCAGTGTTTTTaGAGCCGAAAGCATTGTTCT +
Preference number: 4 (lower is better)
Translates to: HGHVKRCQITIDPGPAAKRKQCF*SRKHCS
Trigger: AGAACAATGCTTTCGGCTCCAAAAACACTGCTTTCT...TTTGGCTGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATAGTAGAGAAACTCATTaGCAGCATTTAGATGTGGCG +
Preference number: 4 (lower is better)
Translates to: WNTFLCFLVECRPPTEVNSRETH*QHLDVA
Trigger: CGCCACATCTAAATGCTGCCAATGAGTTTCTCTACT...ATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR TCA 90 bp CCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACAAAATACCCCTCAGGTaGCATTTAGCCCATGACCCT +
Preference number: 4 (lower is better)
Translates to: PCHDLSCMSEDGCSPNTYKIPLR*HLAHDP
Trigger: AGGGTCATGGGCTAAATGTCACCTGAGGGGTATTTT...GTATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR GCA 90 bp TTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATACTGGAGCAATGTCAGAAGATGGATaGTCTCCAAATACATACATG +
Preference number: 4 (lower is better)
Translates to: FLCFLVECRPPTEVNTGAMSEDG*SPNTYM
Trigger: CATGTATGTATTTGGAGAGCATCCATCTTCTGACAT...TGCTCCAGTATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TTCCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACATACATGCTTCTCTaGGGGTCACCTCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: FLVMTSVVCQKMDALQIHTYMLL*GSPHCS
Trigger: ACTGCAGTGAGGTGACCCCCAGAGAAGCATGTATGT...ATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACTGGAATACCTTCCTGTGTTTCTTGGTGTCCCCATTCCTGAATaGTACTGTAAGGAAGATTCT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTLEYLPVFLGVPIPE*YCKEDS
Trigger: AGAATCTTCCTTACAGTACCATTCAGGAATGGGGAC...ACCAAGAAACACAGGAAGGTATTCCAGTGTGTGTGTGTGTGTGTGTGTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp AGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACATGCTCGTGTATACAACATACATGCTTCTCTaGGGGTCACCTCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: SCMSEDGCSPNTYMLVYTTYMLL*GSPHCS
Trigger: ACTGCAGTGAGGTGACCCCCAGAGAAGCATGTATGT...TGTATACACGAGCATGTATGTATTTGGAGAGCATCCATCTTCTGACATACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp CCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACCACACACACACACACTaGAATACCTTCCTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: PCHDLSCMSEDGCSPNTYHTHTH*NTFLCF
Trigger: GAAACACAGGAAGGTATTCCAGTGTGTGTGTGTGTG...GTATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TTCCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATGCTGAATTTGACATGTaGCCTGCATTTGTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: FLVMTSVVCQKMDALQIHAEFDM*PAFVRE
Trigger: CTCTCTCACAAATGCAGGCCACATGTCAAATTCAGC...ATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR GCA 90 bp TTCCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATAGAGATGCTACTGGTTaGATTTTCCCTCCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: FLVMTSVVCQKMDALQIHRDATG*IFPPLE
Trigger: TTCAAGAGGAGGGAAAATGCAACCAGTAGCATCTCT...ATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CCA 90 bp TTCCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATAGTAGAGAAACTCATTaGCAGCATTTAGATGTGGCG +
Preference number: 4 (lower is better)
Translates to: FLVMTSVVCQKMDALQIHSRETH*QHLDVA
Trigger: CGCCACATCTAAATGCTGCCAATGAGTTTCTCTACT...ATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR GCA 90 bp AGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACATGCTCGTGTATACAATGTCAGAAGATGGATaGTCTCCAAATACATACATG +
Preference number: 4 (lower is better)
Translates to: SCMSEDGCSPNTYMLVYTMSEDG*SPNTYM
Trigger: CATGTATGTATTTGGAGAGCATCCATCTTCTGACAT...TGTATACACGAGCATGTATGTATTTGGAGAGCATCCATCTTCTGACATACAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS CCA 90 bp CAGCGCGGGCTCGGGGGCGTTGGCTGCGCTGGCCTCTCCGAGCGCTaGGCCCGGGGCCCGGAAGGCCTCCTCGCTCTCGGACAGGCCCTT +
Preference number: 5 (lower is better)
Translates to: QRGLGGVGCAGLSER*ARGPEGLLALGQAL
Trigger: AAGGGCCTGTCCGAGAGCGAGGAGGCCTTCCGGGCCCCGGGCCCAGCGCTCGGAGAGGCCAGCGCAGCCAACGCCCCCGAGCCCGCGCTG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS GCA 90 bp CCCGGGGCCCGGAAGGCCTCCTCGCTCTCGGACAGGCCCTTATCCTaGAGCATCTCCTGCGGGCACAGCACACAACGAGTCACTCGCCCA +
Preference number: 5 (lower is better)
Translates to: PGARKASSLSDRPLS*SISCGHSTQRVTRP
Trigger: TGGGCGAGTGACTCGTTGTGTGCTGTGCCCGCAGGAGATGCTGCAGGATAAGGGCCTGTCCGAGAGCGAGGAGGCCTTCCGGGCCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240335.1
CDS TCA 90 bp GGTGGGAAAGGTGCTGAGGGGCAGGTCCTGCGGCTCCGCGAGCTGTaGGTGTGCCCCGTTCTCGTGCTGGTAGTGCTGGAGTGCCTGGTG +
Preference number: 5 (lower is better)
Translates to: GGKGAEGQVLRLREL*VCPVLVLVVLECLV
Trigger: CACCAGGCACTCCAGCACTACCAGCACGAGAACGGGGCACACTCACAGCTCGCGGAGCCGCAGGACCTGCCCCTCAGCACCTTTCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240335.1
ENST00000586874.2
ENST00000589449.5
ENST00000642491.1
ENST00000644296.1
CDS CCA 90 bp TTGGCAGCATTTAGATGTGGCGAGGGTGGCTTCCTCTCACACCCTTaGGGGAGGCCGCGCTCTCTTGGGAATGAGGCGCTGGGCCCCCGC +
Preference number: 5 (lower is better)
Translates to: LAAFRCGEGGFLSHP*GRPRSLGNEALGPR
Trigger: GCGGGGGCCCAGCGCCTCATTCCCAAGAGAGCGCGGCCTCCCCCAAGGGTGTGAGAGGAAGCCACCCTCGCCACATCTAAATGCTGCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS TCA 90 bp GGCAGTGATAGAAGAGGCTTGAGTCCCTCTGGGTGGGAAAGGTGCTaGGGGGCAGGTCCTGCGGCTCCGCGAGCTGTGAGTGTGCCCCGT +
Preference number: 5 (lower is better)
Translates to: GSDRRGLSPSGWERC*GAGPAAPRAVSVPR
Trigger: ACGGGGCACACTCACAGCTCGCGGAGCCGCAGGACCTGCCCCTCAGCACCTTTCCCACCCAGAGGGACTCAAGCCTCTTCTATCACTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000240335.1
ENST00000586874.2
ENST00000589449.5
ENST00000642491.1
ENST00000644296.1
CDS CCA 90 bp TCTCACACCCTTGGGGGAGGCCGCGCTCTCTTGGGAATGAGGCGCTaGGCCCCCGCTCTCGGACCTGAGACTGGGAGAGCTGATTGTAGA +
Preference number: 5 (lower is better)
Translates to: SHTLGGGRALLGMRR*APALGPETGRADCR
Trigger: TCTACAATCAGCTCTCCCAGTCTCAGGTCCGAGAGCGGGGGCCCAGCGCCTCATTCCCAAGAGAGCGCGGCCTCCCCCAAGGGTGTGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS TCA 90 bp CCTCGTGGAACTTCTTCCAGAGCTCCTTCTCATGCAGCCCCACCTTaGTGTTCTCGATGGTCTGCTCCGCGGCGGCGGCGGCGACGACGT +
Preference number: 5 (lower is better)
Translates to: PRGTSSRAPSHAAPP*CSRWSAPRRRRRRR
Trigger: ACGTCGTCGCCGCCGCCGCCGCGGAGCAGACCATCGAGAACATCAAGGTGGGGCTGCATGAGAAGGAGCTCTGGAAGAAGTTCCACGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240335.1
ENST00000589003.5
ENST00000642491.1
ENST00000644296.1
CDS CCA 90 bp CTGGACAGAACAGGGCTTCCAGAAAGGATCAAGGCCTCTATAAGCTaGCGGGCCCTAAGCCCAGGCGAGGACCCCGACCGAGGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: LDRTGLPERIKASIS*RALSPGEDPDRGGG
Trigger: CCCTCCACCTCGGTCGGGGTCCTCGCCTGGGCTTAGGGCCCGCCAGCTTATAGAGGCCTTGATCCTTTCTGGAAGCCCTGTTCTGTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593249.5
CDS-3UTR CAA 90 bp GAGCCCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCGGAGGGGCTCAGCATTaGCTGGTCGTAGGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: EPTSQAVSQTLQKSKEWAGGAQH*LVVGRG
Trigger: CCCCCTCCCTACGACCAGCAAATGCTGAGCCCCTCC...GGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS TCA 90 bp GTGGCGGGTACCGTCTCGTCTTTTCAGGCAGTGATAGAAGAGGCTTaGGTCCCTCTGGGTGGGAAAGGTGCTGAGGGGCAGGTCCTGCGG +
Preference number: 5 (lower is better)
Translates to: VAGTVSSFQAVIEEA*VPLGGKGAEGQVLR
Trigger: CCGCAGGACCTGCCCCTCAGCACCTTTCCCACCCAGAGGGACTCAAGCCTCTTCTATCACTGCCTGAAAAGACGAGACGGTACCCGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240335.1
CDS TCA 90 bp GCGGGTACCGTCTGCTCGTCTTTTCAGGCAGTGATAGAAGAGGCTTaGGTCCCTCTGGGTGGGAAAGGTGCTGAGGGGCAGGTCCTGCGG +
Preference number: 5 (lower is better)
Translates to: AGTVCSSFQAVIEEA*VPLGGKGAEGQVLR
Trigger: CCGCAGGACCTGCCCCTCAGCACCTTTCCCACCCAGAGGGACTCAAGCCTCTTCTATCACTGCCTGAAAAGACGAGCAGACGGTACCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp ACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGAGGAGACGTGAGAGGAGGGGCTCAGCATTaGCTGGTCGTAGGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: TEVNTGATRSRGYGGDVRGGAQH*LVVGRG
Trigger: CCCCCTCCCTACGACCAGCAAATGCTGAGCCCCTCC...TCTCACGTCTCCTCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp ACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGAGGAGACGTGAGACTTCCTCTCACACCCTaGGGGGAGGCCGCGCTCTCT +
Preference number: 5 (lower is better)
Translates to: TEVNTGATRSRGYGGDVRLPLTP*GEAALS
Trigger: AGAGAGCGCGGCCTCCCCCAAGGGTGTGAGAGGAAG...TCTCACGTCTCCTCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS TCA 90 bp CACAGTCTCCATCGTCTGCACGCTATAGCTGGTGTACGGCGACACTaGAGTCCACATGTTACAGCTCAGCGGAGGTGGGGGCAGGTCGTC +
Preference number: 5 (lower is better)
Translates to: HSLHRLHAIAGVRRH*SPHVTAQRRWGQVV
Trigger: GACGACCTGCCCCCACCTCCGCTGAGCTGTAACATGTGGACTTCAGTGTCGCCGTACACCAGCTATAGCGTGCAGACGATGGAGACTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp CCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCACTTCCTCTCACACCCTaGGGGGAGGCCGCGCTCTCT +
Preference number: 5 (lower is better)
Translates to: PTHGHVKRCQITIDPGPALPLTP*GEAALS
Trigger: AGAGAGCGCGGCCTCCCCCAAGGGTGTGAGAGGAAG...TGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS CCA 90 bp GGAAGGGCTGGTACGGCACAGTCTCCATCGTCTGCACGCTATAGCTaGTGTACGGCGACACTGAAGTCCACATGTTACAGCTCAGCGGAG +
Preference number: 5 (lower is better)
Translates to: GRAGTAQSPSSARYS*CTATLKSTCYSSAE
Trigger: CTCCGCTGAGCTGTAACATGTGGACTTCAGTGTCGCCGTACACCAGCTATAGCGTGCAGACGATGGAGACTGTGCCGTACCAGCCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp TGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATGGAGGCCGCGCTCTCTaGGGAATGAGGCGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: WNTFLCFLVECRPPTEVNGGRAL*GMRRWA
Trigger: GGCCCAGCGCCTCATTCCCAAGAGAGCGCGGCCTCC...ATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp TGCAGGCCACCCACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGAAGTGATAGAAGAGGCTaGAGTCCCTCTGGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: CRPPTEVNTGATRSRGYGSDRRG*SPSGWE
Trigger: TTCCCACCCAGAGGGACTCAAGCCTCTTCTATCACT...TCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGTGGGTGGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACACTGGAATACCTTCCTGTGTTTCTTGGTGGAGGCCGCGCTCTCTaGGGAATGAGGCGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTLEYLPVFLGGGRAL*GMRRWA
Trigger: GGCCCAGCGCCTCATTCCCAAGAGAGCGCGGCCTCC...ACCAAGAAACACAGGAAGGTATTCCAGTGTGTGTGTGTGTGTGTGTGTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp TGCAGGCCACCCACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGAGATTCTCAGCTCCCCTaGCAAAGAGAAGGCCAGGAA +
Preference number: 5 (lower is better)
Translates to: CRPPTEVNTGATRSRGYGDSQLP*QREGQE
Trigger: TTCCTGGCCTTCTCTTTGCAAGGGGAGCTGAGAATC...TCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGTGGGTGGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CAA 90 bp CTGAGCCCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGAGTGATAGAAGAGGCTaGAGTCCCTCTGGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: LSPPLRQSHRLSRSQRSGSDRRG*SPSGWE
Trigger: TTCCCACCCAGAGGGACTCAAGCCTCTTCTATCACT...CCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGGGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CAA 90 bp CTAGGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTAGGAGGGGCTCAGCATTaGCTGGTCGTAGGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: LGHSLSSQLYYQSTHCGLGGAQH*LVVGRG
Trigger: CCCCCTCCCTACGACCAGCAAATGCTGAGCCCCTCC...TAAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CAA 90 bp CCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACGGAGGCCGCGCTCTCTaGGGAATGAGGCGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: PCHDLSCMSEDGCSPNTYGGRAL*GMRRWA
Trigger: GGCCCAGCGCCTCATTCCCAAGAGAGCGCGGCCTCC...GTATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp CCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCAACCTTCCTGTGTTTCTaGGTAGAGTGCAGGCCACCC +
Preference number: 5 (lower is better)
Translates to: PTHGHVKRCQITIDPGPATFLCF*VECRPP
Trigger: GGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGT...TGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp ACACACTGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGTCATGCAGCCCCACCTaGATGTTCTCGATGGTCTGC +
Preference number: 5 (lower is better)
Translates to: THWNTFLCFLVECRPPTESCSPT*MFSMVC
Trigger: GCAGACCATCGAGAACATCAAGGTGGGGCTGCATGA...CTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCAGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp CTGAGCCCACCTCTCAGGCAGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGTTGGAGCCGAAAGCATaGTTCTCATCAGCCTTAACG +
Preference number: 5 (lower is better)
Translates to: LSPPLRQSHRLSRSQRSGLEPKA*FSSALT
Trigger: CGTTAAGGCTGATGAGAACAATGCTTTCGGCTCCAA...CCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACTGCCTGAGAGGTGGGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CAA 90 bp CCCACCCACGGGCATGTCAAGAGATGTCAGATAACAATAGACCCAGGTCCTGCAAGTGATAGAAGAGGCTaGAGTCCCTCTGGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: PTHGHVKRCQITIDPGPASDRRG*SPSGWE
Trigger: TTCCCACCCAGAGGGACTCAAGCCTCTTCTATCACT...TGCAGGACCTGGGTCTATTGTTATCTGACATCTCTTGACATGCCCGTGGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp ACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGAGGAGACGTGAGAAGGATATACTTGGTCTaGGGGTTCATGCCTGTGACT +
Preference number: 5 (lower is better)
Translates to: TEVNTGATRSRGYGGDVRRIYLV*GFMPVT
Trigger: AGTCACAGGCATGAACCCCAAGACCAAGTATATCCT...TCTCACGTCTCCTCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp TGCAGGCCACCCACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGATACTTGTGCATAGAGTaGAGGATGATATGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: CRPPTEVNTGATRSRGYGYLCIE*RMIWPK
Trigger: CTTTGGCCATATCATCCTCAACTCTATGCACAAGTA...TCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGTGGGTGGCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp TTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATACTGGAGCAACCTTCCTGTGTTTCTaGGTAGAGTGCAGGCCACCC +
Preference number: 5 (lower is better)
Translates to: FLCFLVECRPPTEVNTGATFLCF*VECRPP
Trigger: GGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGT...TGCTCCAGTATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp TGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATTCATGCAGCCCCACCTaGATGTTCTCGATGGTCTGC +
Preference number: 5 (lower is better)
Translates to: WNTFLCFLVECRPPTEVNSCSPT*MFSMVC
Trigger: GCAGACCATCGAGAACATCAAGGTGGGGCTGCATGA...ATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp ACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGAGGAGACGTGAGATGCCTCATGATGCTTTaGGAAATCACGGGGTATTCT +
Preference number: 5 (lower is better)
Translates to: TEVNTGATRSRGYGGDVRCLMML*EITGYS
Trigger: AGAATACCCCGTGATTTCCAAAAGCATCATGAGGCA...TCTCACGTCTCCTCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp TGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATACCTTCCTGTGTTTCTaGGTAGAGTGCAGGCCACCC +
Preference number: 5 (lower is better)
Translates to: WNTFLCFLVECRPPTEVNTFLCF*VECRPP
Trigger: GGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGT...ATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS GCA 90 bp TTAGGCTTTGTGGGCCGCAGGGTATCTGTTGCAACTACGAAACTCTaGCGTTGTACCATGAAAGCAGCCGTAGACAACCTCGTCTTTTCA +
Preference number: 5 (lower is better)
Translates to: LGFVGRRVSVATTKL*RCTMKAAVDNLVFS
Trigger: TGAAAAGACGAGGTTGTCTACGGCTGCTTTCATGGTACAACGGCAGAGTTTCGTAGTTGCAACAGATACCCTGCGGCCCACAAAGCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589449.5
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACACTGGAATACCTTCCTGTGTTTCTTGGTTCATGCAGCCCCACCTaGATGTTCTCGATGGTCTGC +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTLEYLPVFLGSCSPT*MFSMVC
Trigger: GCAGACCATCGAGAACATCAAGGTGGGGCTGCATGA...ACCAAGAAACACAGGAAGGTATTCCAGTGTGTGTGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp ACAGAGGTTAATACTGGAGCAACACGGTCCCGGGGCTATGGAGGAGACGTGAGATACTTGTGCATAGAGTaGAGGATGATATGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: TEVNTGATRSRGYGGDVRYLCIE*RMIWPK
Trigger: CTTTGGCCATATCATCCTCAACTCTATGCACAAGTA...TCTCACGTCTCCTCCATAGCCCCGGGACCGTGTTGCTCCAGTATTAACCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp TGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATGATTCTCAGCTCCCCTaGCAAAGAGAAGGCCAGGAA +
Preference number: 5 (lower is better)
Translates to: WNTFLCFLVECRPPTEVNDSQLP*QREGQE
Trigger: TTCCTGGCCTTCTCTTTGCAAGGGGAGCTGAGAATC...ATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS CCA 90 bp AAGATTCTCGGGACAAGGAGAAGGTTTGAGAGTAGAGAAACTCATTaGCAGCATTTAGATGTGGCGAGGGTGGCTTCCTCTCACACCCTT +
Preference number: 5 (lower is better)
Translates to: KILGTRRRFESRETH*QHLDVARVASSHTL
Trigger: AAGGGTGTGAGAGGAAGCCACCCTCGCCACATCTAAATGCTGCCAATGAGTTTCTCTACTCTCAAACCTTCTCCTTGTCCCGAGAATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp ACACACTGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGCAGAAAGCAGTGTTTTaGGAGCCGAAAGCATTGTTC +
Preference number: 5 (lower is better)
Translates to: THWNTFLCFLVECRPPTEQKAVF*EPKALF
Trigger: GAACAATGCTTTCGGCTCCAAAAACACTGCTTTCTG...CTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCAGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp AGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTGCTACCAAAACCACAGAAAGCAGTGTTTTaGGAGCCGAAAGCATTGTTC +
Preference number: 5 (lower is better)
Translates to: SLTDSPEVKGVGLLLPKPQKAVF*EPKALF
Trigger: GAACAATGCTTTCGGCTCCAAAAACACTGCTTTCTG...TGGTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CAA 90 bp CAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTGCTACCAAAACCAGATTCTCTGCCTCATGATGCTTTaGGAAATCACGGGGTATTCT +
Preference number: 5 (lower is better)
Translates to: QTLQKSKEWASCYQNQILCLMML*EITGYS
Trigger: AGAATACCCCGTGATTTCCAAAAGCATCATGAGGCA...GAGAATCTGGTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CAA 90 bp TGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATAGGATATACTTGGTCTaGGGGTTCATGCCTGTGACT +
Preference number: 5 (lower is better)
Translates to: WNTFLCFLVECRPPTEVNRIYLV*GFMPVT
Trigger: AGTCACAGGCATGAACCCCAAGACCAAGTATATCCT...ATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp TCTAGGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTATCAGCAGGATATACTaGGTCTTGGGGTTCATGCCT +
Preference number: 5 (lower is better)
Translates to: SRPLTEQPAVLSKYTLWLISRIY*VLGFMP
Trigger: AGGCATGAACCCCAAGACCAAGTATATCCTGCTGAT...AAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CAA 90 bp TGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATATCAGCAGGATATACTaGGTCTTGGGGTTCATGCCT +
Preference number: 5 (lower is better)
Translates to: WNTFLCFLVECRPPTEVNISRIY*VLGFMP
Trigger: AGGCATGAACCCCAAGACCAAGTATATCCTGCTGAT...ATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp AGTCTCACAGACTCTCCAGAAGTCAAAGGAGTGGGCCTCCTGCTACCAAAACCATACTTGTGCATAGAGTaGAGGATGATATGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: SLTDSPEVKGVGLLLPKPYLCIE*RMIWPK
Trigger: CTTTGGCCATATCATCCTCAACTCTATGCACAAGTA...TGGTTTTGGTAGCAGGAGGCCCACTCCTTTGACTTCTGGAGAGTCTGTGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CAA 90 bp TGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATTTGGAGCCGAAAGCATaGTTCTCATCAGCCTTAACG +
Preference number: 5 (lower is better)
Translates to: WNTFLCFLVECRPPTEVNLEPKA*FSSALT
Trigger: CGTTAAGGCTGATGAGAACAATGCTTTCGGCTCCAA...ATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp TTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATACTGGAGCATGCCTCATGATGCTTTaGGAAATCACGGGGTATTCT +
Preference number: 5 (lower is better)
Translates to: FLCFLVECRPPTEVNTGACLMML*EITGYS
Trigger: AGAATACCCCGTGATTTCCAAAAGCATCATGAGGCA...TGCTCCAGTATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp TCTAGGCCACTCACTGAGCAGCCAGCTGTACTATCAAAGTACACATTGTGGCTTGGACAAGGAGAAGGTTaGAGAGTAGAGAAACTCATT +
Preference number: 5 (lower is better)
Translates to: SRPLTEQPAVLSKYTLWLGQGEG*RVEKLI
Trigger: AATGAGTTTCTCTACTCTCAAACCTTCTCCTTGTCC...AAGCCACAATGTGTACTTTGATAGTACAGCTGGCTGCTCAGTGAGTGGCCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240335.1
ENST00000644296.1
CDS-3UTR CAA 90 bp TGGAATACCTTCCTGTGTTTCTTGGTAGAGTGCAGGCCACCCACAGAGGTTAATCTATCTTTATTTCTGTaGGCCTTTCTCGCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: WNTFLCFLVECRPPTEVNLSLFL*AFLAPE
Trigger: TTCTGGAGCGAGAAAGGCCAACAGAAATAAAGATAG...ATTAACCTCTGTGGGTGGCCTGCACTCTACCAAGAAACACAGGAAGGTATTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACACTGGAATACCTTCCTGTGTTTCTTGGTGGACAAGGAGAAGGTTaGAGAGTAGAGAAACTCATT +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTLEYLPVFLGGQGEG*RVEKLI
Trigger: AATGAGTTTCTCTACTCTCAAACCTTCTCCTTGTCC...ACCAAGAAACACAGGAAGGTATTCCAGTGTGTGTGTGTGTGTGTGTGTGTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp CCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACAGTGATTTCCCAAGTTaGATGGAGAGTTCACCCCAG +
Preference number: 5 (lower is better)
Translates to: PCHDLSCMSEDGCSPNTYSDFPS*MESSPQ
Trigger: CTGGGGTGAACTCTCCATCAAACTTGGGAAATCACT...GTATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS-3UTR CAA 90 bp CCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACCAGAAAGCAGTGTTTTaGGAGCCGAAAGCATTGTTC +
Preference number: 5 (lower is better)
Translates to: PCHDLSCMSEDGCSPNTYQKAVF*EPKALF
Trigger: GAACAATGCTTTCGGCTCCAAAAACACTGCTTTCTG...GTATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp AGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACATGCTCGTGTATACAATCAGCAGGATATACTaGGTCTTGGGGTTCATGCCT +
Preference number: 5 (lower is better)
Translates to: SCMSEDGCSPNTYMLVYTISRIY*VLGFMP
Trigger: AGGCATGAACCCCAAGACCAAGTATATCCTGCTGAT...TGTATACACGAGCATGTATGTATTTGGAGAGCATCCATCTTCTGACATACAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp AGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATACATGCTCGTGTATACATTGGAGCCGAAAGCATaGTTCTCATCAGCCTTAACG +
Preference number: 5 (lower is better)
Translates to: SCMSEDGCSPNTYMLVYTLEPKA*FSSALT
Trigger: CGTTAAGGCTGATGAGAACAATGCTTTCGGCTCCAA...TGTATACACGAGCATGTATGTATTTGGAGAGCATCCATCTTCTGACATACAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS-3UTR CAA 90 bp TTCCTTGTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATGGACAAGGAGAAGGTTaGAGAGTAGAGAAACTCATT +
Preference number: 5 (lower is better)
Translates to: FLVMTSVVCQKMDALQIHGQGEG*RVEKLI
Trigger: AATGAGTTTCTCTACTCTCAAACCTTCTCCTTGTCC...ATGTATTTGGAGAGCATCCATCTTCTGACATACAACTGAGGTCATGACAAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS CCA 72 bp CTCGGGGGCGTTGGCTGCGCTGGCCTCTCCGAGCGCTaGGCCCGGGGCCCGGAAGGCCTCCTCGCTCTCGGA +
Preference number: 6 (lower is better)
Translates to: LGGVGCAGLSER*ARGPEGLLALG
Trigger: TCCGAGAGCGAGGAGGCCTTCCGGGCCCCGGGCCCAGCGCTCGGAGAGGCCAGCGCAGCCAACGCCCCCGAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS CCA 72 bp GCGGGCCCTAAGCCCAGGCGAGGACCCCGACCGAGGTaGAGGGTTCACTTCCTTGCCAGCCCACGCCCCACC +
Preference number: 6 (lower is better)
Translates to: AGPKPRRGPRPR*RVHFLASPRPT
Trigger: GGTGGGGCGTGGGCTGGCAAGGAAGTGAACCCTCCACCTCGGTCGGGGTCCTCGCCTGGGCTTAGGGCCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593249.5
CDS CAA 90 bp GCGAGGGTGGCTTCCTCTCACACCCTTGGGGGAGGCCGCGCTCTCTaGGGAATGAGGCGCTGGGCCCCCGCTCTCGGACCTGAGACTGGG +
Preference number: 6 (lower is better)
Translates to: ARVASSHTLGGGRAL*GMRRWAPALGPETG
Trigger: CCCAGTCTCAGGTCCGAGAGCGGGGGCCCAGCGCCTCATTCCCAAGAGAGCGCGGCCTCCCCCAAGGGTGTGAGAGGAAGCCACCCTCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS CCA 72 bp CTTGGGGGAGGCCGCGCTCTCTTGGGAATGAGGCGCTaGGCCCCCGCTCTCGGACCTGAGACTGGGAGAGCT +
Preference number: 6 (lower is better)
Translates to: LGGGRALLGMRR*APALGPETGRA
Trigger: AGCTCTCCCAGTCTCAGGTCCGAGAGCGGGGGCCCAGCGCCTCATTCCCAAGAGAGCGCGGCCTCCCCCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS CAA 72 bp GCTTCCTCTCACACCCTTGGGGGAGGCCGCGCTCTCTaGGGAATGAGGCGCTGGGCCCCCGCTCTCGGACCT +
Preference number: 6 (lower is better)
Translates to: ASSHTLGGGRAL*GMRRWAPALGP
Trigger: AGGTCCGAGAGCGGGGGCCCAGCGCCTCATTCCCAAGAGAGCGCGGCCTCCCCCAAGGGTGTGAGAGGAAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS TCA 72 bp GGTGCTGAGGGGCAGGTCCTGCGGCTCCGCGAGCTGTaGGTGTGCCCCGTTCTCGTGCTGGTAGTGCTGGAG +
Preference number: 6 (lower is better)
Translates to: GAEGQVLRLREL*VCPVLVLVVLE
Trigger: CTCCAGCACTACCAGCACGAGAACGGGGCACACTCACAGCTCGCGGAGCCGCAGGACCTGCCCCTCAGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000240335.1
ENST00000586874.2
ENST00000589449.5
ENST00000590174.5
ENST00000642491.1
ENST00000644296.1
CDS GCA 72 bp TCCCTCTGGGTGGGAAAGGTGCTGAGGGGCAGGTCCTaGGGCTCCGCGAGCTGTGAGTGTGCCCCGTTCTCG +
Preference number: 6 (lower is better)
Translates to: SLWVGKVLRGRS*GSASCECAPFS
Trigger: CGAGAACGGGGCACACTCACAGCTCGCGGAGCCGCAGGACCTGCCCCTCAGCACCTTTCCCACCCAGAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240335.1
ENST00000586874.2
ENST00000589449.5
ENST00000642491.1
ENST00000644296.1
CDS GCA 72 bp GTGGGCAGCCGCGGCATCATGGTGGTGGCGGTGAAGTaGGTGGGGAAGGGCTGGTACGGCACAGTCTCCATC +
Preference number: 6 (lower is better)
Translates to: VGSRGIMVVAVK*VGKGWYGTVSI
Trigger: GATGGAGACTGTGCCGTACCAGCCCTTCCCCACGCACTTCACCGCCACCACCATGATGCCGCGGCTGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240335.1
ENST00000589449.5
ENST00000642491.1
ENST00000644296.1
CDS GCA 72 bp CTTATCCTGCAGCATCTCCCTAATTGCGGTGCCGCATaGGGAGGCGCCAGCGGCCCGAGGTCCCCTGCAGGT +
Preference number: 6 (lower is better)
Translates to: LILQHLPNCGAA*GGASGPRSPAG
Trigger: ACCTGCAGGGGACCTCGGGCCGCTGGCGCCTCCGCATGCGGCACCGCAATTAGGGAGATGCTGCAGGATAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644296.1
CDS GCA 72 bp CGGAAGGCCTCCTCGCTCTCGGACAGGCCCTTATCCTaGAGCATCTCCTGCGGGCACAGCACACAACGAGTC +
Preference number: 6 (lower is better)
Translates to: RKASSLSDRPLS*SISCGHSTQRV
Trigger: GACTCGTTGTGTGCTGTGCCCGCAGGAGATGCTGCAGGATAAGGGCCTGTCCGAGAGCGAGGAGGCCTTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240335.1
CDS TCA 72 bp ACTTCTTCCAGAGCTCCTTCTCATGCAGCCCCACCTTaGTGTTCTCGATGGTCTGCTCCGCGGCGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: TSSRAPSHAAPP*CSRWSAPRRRR
Trigger: CCGCCGCCGCCGCGGAGCAGACCATCGAGAACATCAAGGTGGGGCTGCATGAGAAGGAGCTCTGGAAGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240335.1
ENST00000589003.5
ENST00000642491.1
ENST00000644296.1
CDS GCA 72 bp TCGCTCTCGGACAGGCCCTTATCCTGCAGCATCTCCTaGGGGCACAGCACACAACGAGTCACTCGCCCAGGT +
Preference number: 6 (lower is better)
Translates to: SLSDRPLSCSIS*GHSTQRVTRPG
Trigger: ACCTGGGCGAGTGACTCGTTGTGTGCTGTGCCCGCAGGAGATGCTGCAGGATAAGGGCCTGTCCGAGAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240335.1
CDS GCA 72 bp CCCCCACCGAAGAGGGGGCTTCCAGATAGGATCGCTTaGAAGGTAAGTCCAGGTGGCGGGTACCGTCTCGTC +
Preference number: 6 (lower is better)
Translates to: PPPKRGLPDRIA*KVSPGGGYRLV
Trigger: GACGAGACGGTACCCGCCACCTGGACTTACCTTGCAAGCGATCCTATCTGGAAGCCCCCTCTTCGGTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000240335.1
CDS GCA 72 bp CCCCCACCGAAGAGGGGGCTTCCAGATAGGATCGCTTaGAAGGTAAGTCCAGGTGGCGGGTACCGTCTGCTG +
Preference number: 6 (lower is better)
Translates to: PPPKRGLPDRIA*KVSPGGGYRLL
Trigger: CAGCAGACGGTACCCGCCACCTGGACTTACCTTGCAAGCGATCCTATCTGGAAGCCCCCTCTTCGGTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000589449.5
CDS GCA 72 bp CCCCCACCGAAGAGGGGGCTTCCAGATAGGATCGCTTaGAAGGTAAGTCCAGGTGGCGGGTACCGTCTGCTC +
Preference number: 6 (lower is better)
Translates to: PPPKRGLPDRIA*KVSPGGGYRLL
Trigger: GAGCAGACGGTACCCGCCACCTGGACTTACCTTGCAAGCGATCCTATCTGGAAGCCCCCTCTTCGGTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000642491.1
ENST00000644296.1
CDS CCA 72 bp TTTAGATGTGGCGAGGGTGGCTTCCTCTCACACCCTTaGGGGAGGCCGCGCTCTCTTGGGAATGAGGCGCTG +
Preference number: 6 (lower is better)
Translates to: FRCGEGGFLSHP*GRPRSLGNEAL
Trigger: CAGCGCCTCATTCCCAAGAGAGCGCGGCCTCCCCCAAGGGTGTGAGAGGAAGCCACCCTCGCCACATCTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS CCA 72 bp ACAGGGCTTCCAGAAAGGATCAAGGCCTCTATAAGCTaGCGGGCCCTAAGCCCAGGCGAGGACCCCGACCGA +
Preference number: 6 (lower is better)
Translates to: TGLPERIKASIS*RALSPGEDPDR
Trigger: TCGGTCGGGGTCCTCGCCTGGGCTTAGGGCCCGCCAGCTTATAGAGGCCTTGATCCTTTCTGGAAGCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593249.5
CDS TCA 72 bp CTGGAGCAACACGGTCCCGGGGCTATGGAGGAGACGTaGGAGTCATCCGTCAGTCCAGTTCTCCACAGTCCC +
Preference number: 6 (lower is better)
Translates to: LEQHGPGAMEET*ESSVSPVLHSP
Trigger: GGGACTGTGGAGAACTGGACTGACGGATGACTCTCACGTCTCCTCCATAGCCCCGGGACCGTGTTGCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS TCA 72 bp CATCGTCTGCACGCTATAGCTGGTGTACGGCGACACTaGAGTCCACATGTTACAGCTCAGCGGAGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: HRLHAIAGVRRH*SPHVTAQRRWG
Trigger: CCCCCACCTCCGCTGAGCTGTAACATGTGGACTTCAGTGTCGCCGTACACCAGCTATAGCGTGCAGACGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS GCA 72 bp TGTACGGCGACAATGCTTCTCTGGGGGTCACCTCACTaGAGTAGGAGGGGCTCAGCATTTGCTGGTCGTAGG +
Preference number: 6 (lower is better)
Translates to: CTATMLLWGSPH*SRRGSAFAGRR
Trigger: CCTACGACCAGCAAATGCTGAGCCCCTCCTACTGCAGTGAGGTGACCCCCAGAGAAGCATTGTCGCCGTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589449.5
CDS CCA 72 bp TCTCGGGCCCTGAACCTGAGTACATACATGCTTCTCTaGGGGTCACCTCACTGCAGTAGGAGGGGCTCAGCA +
Preference number: 6 (lower is better)
Translates to: SRALNLSTYMLL*GSPHCSRRGSA
Trigger: TGCTGAGCCCCTCCTACTGCAGTGAGGTGACCCCCAGAGAAGCATGTATGTACTCAGGTTCAGGGCCCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS CCA 72 bp GGTACGGCACAGTCTCCATCGTCTGCACGCTATAGCTaGTGTACGGCGACAATGCTTCTCTGGGGGTCACCT +
Preference number: 6 (lower is better)
Translates to: GTAQSPSSARYS*CTATMLLWGSP
Trigger: AGGTGACCCCCAGAGAAGCATTGTCGCCGTACACCAGCTATAGCGTGCAGACGATGGAGACTGTGCCGTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589449.5
CDS TCA 72 bp ACCGTCTCGTCTTTTCAGGCAGTGATAGAAGAGGCTTaGGTCCCTCTGGGTGGGAAAGGTGCTGAGGGGCAG +
Preference number: 6 (lower is better)
Translates to: TVSSFQAVIEEA*VPLGGKGAEGQ
Trigger: CTGCCCCTCAGCACCTTTCCCACCCAGAGGGACTCAAGCCTCTTCTATCACTGCCTGAAAAGACGAGACGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240335.1
CDS TCA 72 bp GTCTGCTCGTCTTTTCAGGCAGTGATAGAAGAGGCTTaGGTCCCTCTGGGTGGGAAAGGTGCTGAGGGGCAG +
Preference number: 6 (lower is better)
Translates to: VCSSFQAVIEEA*VPLGGKGAEGQ
Trigger: CTGCCCCTCAGCACCTTTCCCACCCAGAGGGACTCAAGCCTCTTCTATCACTGCCTGAAAAGACGAGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642491.1
ENST00000644296.1
CDS TCA 72 bp ACAACCTCGTCTTTTCAGGCAGTGATAGAAGAGGCTTaGGTCCCTCTGGGTGGGAAAGGTGCTGAGGGGCAG +
Preference number: 6 (lower is better)
Translates to: TTSSFQAVIEEA*VPLGGKGAEGQ
Trigger: CTGCCCCTCAGCACCTTTCCCACCCAGAGGGACTCAAGCCTCTTCTATCACTGCCTGAAAAGACGAGGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586874.2
ENST00000589449.5
CDS GCA 72 bp CTGAGTACATACATGCTTCTCTGGGGGTCACCTCACTaGAGTAGGAGGGGCTCAGCATTTGCTGGTCGTAGG +
Preference number: 6 (lower is better)
Translates to: LSTYMLLWGSPH*SRRGSAFAGRR
Trigger: CCTACGACCAGCAAATGCTGAGCCCCTCCTACTGCAGTGAGGTGACCCCCAGAGAAGCATGTATGTACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS CCA 72 bp GGTACGGCACAGTCTCCATCGTCTGCACGCTATAGCTaGTGTACGGCGACACTGAAGTCCACATGTTACAGC +
Preference number: 6 (lower is better)
Translates to: GTAQSPSSARYS*CTATLKSTCYS
Trigger: GCTGTAACATGTGGACTTCAGTGTCGCCGTACACCAGCTATAGCGTGCAGACGATGGAGACTGTGCCGTACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS CAA 72 bp TGGGTGCAGAAAGCAGTGTTTTTGGAGCCGAAAGCATaGTTCTCATCAGCCTTAACGATGTGGAGCCGCGGC +
Preference number: 6 (lower is better)
Translates to: WVQKAVFLEPKA*FSSALTMWSRG
Trigger: GCCGCGGCTCCACATCGTTAAGGCTGATGAGAACAATGCTTTCGGCTCCAAAAACACTGCTTTCTGCACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000240335.1
ENST00000586874.2
ENST00000589003.5
ENST00000589449.5
ENST00000590174.5
ENST00000593249.5
ENST00000642491.1
ENST00000644296.1
CDS CCA 72 bp CCGTCAGTCCAGTTCTCCACAGTCCCCATTCCTGAATaGTACTGTAAGGAAGATTCTCGGGACAAGGAGAAG +
Preference number: 6 (lower is better)
Translates to: PSVQFSTVPIPE*YCKEDSRDKEK
Trigger: CTTCTCCTTGTCCCGAGAATCTTCCTTACAGTACCATTCAGGAATGGGGACTGTGGAGAACTGGACTGACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240335.1
ENST00000642491.1
ENST00000644296.1
CDS CAA 90 bp ATGAAGGAGGTCTCTGGGAACACGTGGGTGCAGAAAGCAGTGTTTTaGGAGCCGAAAGCATTGTTCTCATCAGCCTTAACGATGTGGAGC +
Preference number: 6 (lower is better)
Translates to: MKEVSGNTWVQKAVF*EPKALFSSALTMWS
Trigger: GCTCCACATCGTTAAGGCTGATGAGAACAATGCTTTCGGCTCCAAAAACACTGCTTTCTGCACCCACGTGTTCCCAGAGACCTCCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000240335.1
ENST00000586874.2
ENST00000589449.5
ENST00000590174.5
ENST00000593249.5
ENST00000642491.1
ENST00000644296.1
CDS CAA 72 bp GTCTCTGGGAACACGTGGGTGCAGAAAGCAGTGTTTTaGGAGCCGAAAGCATTGTTCTCATCAGCCTTAACG +
Preference number: 6 (lower is better)
Translates to: VSGNTWVQKAVF*EPKALFSSALT
Trigger: CGTTAAGGCTGATGAGAACAATGCTTTCGGCTCCAAAAACACTGCTTTCTGCACCCACGTGTTCCCAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000240335.1
ENST00000586874.2
ENST00000589449.5
ENST00000590174.5
ENST00000593249.5
ENST00000642491.1
ENST00000644296.1