RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBX3 (Homo sapiens)

Ensembl gene IDs: ENSG00000135111

Ensembl transcript IDs: ENST00000257566.7, ENST00000349155.7, ENST00000548503.1, ENST00000552054.1

Found 352 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAAATATACCTTCATGAATTTGTCTTTAAACCATCTCTCAGCACCTaGCTTTTGAACTGTGAATATATCTCTATAGGCAGGCACCAATTC +
Preference number: 1 (lower is better)
Translates to: KIYLHEFVFKPSLST*LLNCEYISIGRHQF
Trigger: GAATTGGTGCCTGCCTATAGAGATATATTCACAGTTCAAAAGTCAGGTGCTGAGAGATGGTTTAAAGACAAATTCATGAAGGTATATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
3UTR-3UTR CCA 90 bp AACCACGCCAAGAAGACAGGGGCTGTCTCTAGCACATTCTCTCGAGGGAGTCCGCAGCCTGAACTGGACTaGAATGAAAAGACGTGTCTG +
Preference number: 2 (lower is better)
Translates to: NHAKKTGAVSSTFSRGSPQPELD*NEKTCL
Trigger: CAGACACGTCTTTTCATTCCAGTCCAGTTCAGGCTG...CGGACTCCCTCGAGAGAATGTGCTAGAGACAGCCCCTGTCTTCTTGGCGTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
3UTR-3UTR CCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACCACGGCAGCCTGAACTaGACTGGAATGAAAAGACGT +
Preference number: 2 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDHGSLN*TGMKRR
Trigger: ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTG...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
3UTR-3UTR CCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACGCCATGGCGGGCCCGTaGTTTATTTTATATCCGACA +
Preference number: 2 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDAMAGP*FILYPT
Trigger: TGTCGGATATAAAATAAACCACGGGCCCGCCATGGC...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
3UTR-3UTR CCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACACAGCCTGAACTGGACTaGAATGAAAAGACGTGTCTG +
Preference number: 2 (lower is better)
Translates to: EPPESDPDPGHINHAKKTQPELD*NEKTCL
Trigger: CAGACACGTCTTTTCATTCCAGTCCAGTTCAGGCTG...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
3UTR CCA 72 bp CGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTaGTGGGCAGAGACCCAGACCAGCCTTGCTGGAAGT +
Preference number: 3 (lower is better)
Translates to: RTEGDVFEHLPA*WAETQTSLAGS
Trigger: ACTTCCAGCAAGGCTGGTCTGGGTCTCTGCCCACCAGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
3UTR CCA 72 bp ACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTGGTaGGCAGAGACCCAGACCAGCCTTGCTGGAAGTTGC +
Preference number: 3 (lower is better)
Translates to: TEGDVFEHLPAW*AETQTSLAGSC
Trigger: GCAACTTCCAGCAAGGCTGGTCTGGGTCTCTGCCCACCAGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
3UTR CCA 72 bp ACTGCAAAAGGAAGGGCTAACGCCATGGCGGGCCCGTaGTTTATTTTATATCCGACAAAGTGCACGGCAGCC +
Preference number: 3 (lower is better)
Translates to: TAKGRANAMAGP*FILYPTKCTAA
Trigger: GGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATGGCGTTAGCCCTTCCTTTTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
3UTR CCA 72 bp TCCCAGACGCAACTGCAAAAGGAAGGGCTAACGCCATaGCGGGCCCGTGGTTTATTTTATATCCGACAAAGT +
Preference number: 3 (lower is better)
Translates to: SQTQLQKEGLTP*RARGLFYIRQS
Trigger: ACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATGGCGTTAGCCCTTCCTTTTGCAGTTGCGTCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AACCACGCCAAGAAGACAGGGGCTGTCTCTAGCACATTCTCTCGAGGGAGTCCGCTCCAGGCGGGGCGCTaGGCTCCAGCCGGGGACAAG +
Preference number: 4 (lower is better)
Translates to: NHAKKTGAVSSTFSRGSPLQAGR*APAGDK
Trigger: CTTGTCCCCGGCTGGAGCCCAGCGCCCCGCCTGGAG...CGGACTCCCTCGAGAGAATGTGCTAGAGACAGCCCCTGTCTTCTTGGCGTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACCCTTGGCCGGCGCTGTaGCCTCGCGAACCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDPWPAL*PREPGS
Trigger: GGAGCCCGGTTCGCGAGGGCACAGCGCCGGCCAAGG...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACGCGGCCGCGTCCGTCTaGACCGTGAGCGGCGCGAAG +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDAAASV*TVSGAK
Trigger: CTTCGCGCCGCTCACGGTGCAGACGGACGCGGCCGC...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp AACCACGCCAAGAAGACAGGGGCTGTCTCTAGCACATTCTCTCGAGGGAGTCCGGGAGGCGGCCGCCGCTaGGGCCATGTACGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: NHAKKTGAVSSTFSRGSPGGGRR*GHVRVG
Trigger: CCCTACACGTACATGGCCGCAGCGGCGGCCGCCTCC...CGGACTCCCTCGAGAGAATGTGCTAGAGACAGCCCCTGTCTTCTTGGCGTGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp AACCACGCCAAGAAGACAGGGGCTGTCTCTAGCACATTCTCTCGAGGGAGTCCGAGAGCCCGAGTCCACTaGCACCGAGGCCGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: NHAKKTGAVSSTFSRGSPRARVH*HRGRAG
Trigger: GCCAGCCCGGCCTCGGTGGCAGTGGACTCGGGCTCT...CGGACTCCCTCGAGAGAATGTGCTAGAGACAGCCCCTGTCTTCTTGGCGTGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCTCCAGGCGGGGCGCTaGGCTCCAGCCGGGGACAAG +
Preference number: 4 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLILQAGR*APAGDK
Trigger: CTTGTCCCCGGCTGGAGCCCAGCGCCCCGCCTGGAG...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AACCACGCCAAGAAGACAGGGGCTGTCTCTAGCACATTCTCTCGAGGGAGTCCGGCGCCTCTTCCACCTTaGCCGGCGCTGTGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: NHAKKTGAVSSTFSRGSPAPLPP*PALCPR
Trigger: GCGAGGGCACAGCGCCGGCCAAGGTGGAAGAGGCGC...CGGACTCCCTCGAGAGAATGTGCTAGAGACAGCCCCTGTCTTCTTGGCGTGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCGGTGGAAGGGCAGGGTaGCCGCGGACGCCCCGGACA +
Preference number: 4 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLIGGRAG*PRTPRT
Trigger: TGTCCGGGGCGTCCGCGGCCACCCTGCCCTTCCACC...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AACCACGCCAAGAAGACAGGGGCTGTCTCTAGCACATTCTCTCGAGGGAGTCCGGGCGGTGCACCGAGCTaGAGGCTGCCGCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: NHAKKTGAVSSTFSRGSPGGAPS*RLPQRR
Trigger: CCTCCTCTGCGGCAGCCTCCAGCTCGGTGCACCGCC...CGGACTCCCTCGAGAGAATGTGCTAGAGACAGCCCCTGTCTTCTTGGCGTGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACGCGCCTCTTCCACCTTaGCCGGCGCTGTGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDAPLPP*PALCPR
Trigger: GCGAGGGCACAGCGCCGGCCAAGGTGGAAGAGGCGC...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACGGCGGTGCACCGAGCTaGAGGCTGCCGCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDGGAPS*RLPQRR
Trigger: CCTCCTCTGCGGCAGCCTCCAGCTCGGTGCACCGCC...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACGGCGGGGCTATGGCGTaGGTCGGGCGACGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDGGAMA*VGRRFV
Trigger: GACAAAGCGTCGCCCGACTCACGCCATAGCCCCGCC...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACGGAGGCGGCCGCCGCTaGGGCCATGTACGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNGGGRR*GHVRVG
Trigger: CCCTACACGTACATGGCCGCAGCGGCGGCCGCCTCC...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AACCACGCCAAGAAGACAGGGGCTGTCTCTAGCACATTCTCTCGAGGGAGTCCGATGGTGGCGGGGCTATaGCGTGAGTCGGGCGACGCT +
Preference number: 4 (lower is better)
Translates to: NHAKKTGAVSSTFSRGSPMVAGL*RESGDA
Trigger: AGCGTCGCCCGACTCACGCCATAGCCCCGCCACCAT...CGGACTCCCTCGAGAGAATGTGCTAGAGACAGCCCCTGTCTTCTTGGCGTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCCGTTGAAGAACTGTTaGCCCGCCAGGCCCGGGGCG +
Preference number: 4 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLIPLKNC*PARPGA
Trigger: CGCCCCGGGCCTGGCGGGCCAACAGTTCTTCAACGG...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACCAGCGGCAGAGGCCATaGCCGTGGAATCCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDQRQRP*PWNPGP
Trigger: CGGGCCTGGATTCCACGGCCATGGCCTCTGCCGCTG...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCACCTCCCCGCCTGGTaGGCAGAGACCCAGACCAGC +
Preference number: 4 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLIHLPAW*AETQTS
Trigger: GCTGGTCTGGGTCTCTGCCCACCAGGCGGGGAGGTG...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AACCACGCCAAGAAGACAGGGGCTGTCTCTAGCACATTCTCTCGAGGGAGTCCGGAACACCTCCCCGCCTaGTGGGCAGAGACCCAGACC +
Preference number: 4 (lower is better)
Translates to: NHAKKTGAVSSTFSRGSPEHLPA*WAETQT
Trigger: GGTCTGGGTCTCTGCCCACCAGGCGGGGAGGTGTTC...CGGACTCCCTCGAGAGAATGTGCTAGAGACAGCCCCTGTCTTCTTGGCGTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp AACCACGCCAAGAAGACAGGGGCTGTCTCTAGCACATTCTCTCGAGGGAGTCCGAGAGCGGGTGCCCGTTaGAGAACTGTTGGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: NHAKKTGAVSSTFSRGSPRAGAR*RTVGPP
Trigger: TGGCGGGCCAACAGTTCTTCAACGGGCACCCGCTCT...CGGACTCCCTCGAGAGAATGTGCTAGAGACAGCCCCTGTCTTCTTGGCGTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCGGCCATGCTCCTCTTTaGTCTCGGCCTCGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLIGHAPL*SRPRRR
Trigger: GCGACGCCGAGGCCGAGAGCAAAGAGGAGCATGGCC...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp AGACCCAGACCAGCCTTGCTGGAAGTTGCTCTGGACATAAATGTTGGAACTCCTGCGGCCGCGTCCGTCTaGACCGTGAGCGGCGCGAAG +
Preference number: 4 (lower is better)
Translates to: RPRPALLEVALDINVGTPAAASV*TVSGAK
Trigger: CTTCGCGCCGCTCACGGTGCAGACGGACGCGGCCGC...AGGAGTTCCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCGCAAACTGGCTGGGGTaGAGGAAGAGCGGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLIANWLG*RKSGCP
Trigger: CGGGCACCCGCTCTTCCTGCACCCCAGCCAGTTTGC...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCGAGGCCAGGACGTGCTaGTGGAGGTGGAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLIEARTC*WRWKGR
Trigger: CCTGCCCTTCCACCTCCAGCAGCACGTCCTGGCCTC...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACACCAGCACCGCGCTCATaGCGAAGTCCGGCGCCCGGT +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTPAPRS*RSPAPG
Trigger: ACCGGGCGCCGGACTTCGCCATGAGCGCGGTGCTGG...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AACCACGCCAAGAAGACAGGGGCTGTCTCTAGCACATTCTCTCGAGGGAGTCCGGCTCCTCCGACGTGGTaGTGGAGATCTTGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: NHAKKTGAVSSTFSRGSPAPPTW*WRSWPR
Trigger: ACGCGGCCAAGATCTCCACCACCACGTCGGAGGAGC...CGGACTCCCTCGAGAGAATGTGCTAGAGACAGCCCCTGTCTTCTTGGCGTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AACCACGCCAAGAAGACAGGGGCTGTCTCTAGCACATTCTCTCGAGGGAGTCCGAGGGCTCCTCCGACGTaGTGGTGGAGATCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: NHAKKTGAVSSTFSRGSPRAPPT*WWRSWP
Trigger: CGGCCAAGATCTCCACCACCACGTCGGAGGAGCCCT...CGGACTCCCTCGAGAGAATGTGCTAGAGACAGCCCCTGTCTTCTTGGCGTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACACCAGGCCGCGAGTGCTaGACGAGATGGTGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTPGREC*TRWWRG
Trigger: GCCCCGCCACCATCTCGTCCAGCACTCGCGGCCTGG...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACGGCCCGAGACACCGGTaGAGGCCCCAGAAACCGTGG +
Preference number: 4 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNGPRHR*RPQKPW
Trigger: CCACGGTTTCTGGGGCCTCCACCGGTGTCTCGGGCC...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACACGTGCTGCTGGAGGTaGAAGGGCAGGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNTCCWR*KGRVAA
Trigger: CGCGGCCACCCTGCCCTTCCACCTCCAGCAGCACGT...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACAAGAACGGCGGCTGGTaGCCCAGCACCGCGCTCATG +
Preference number: 4 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNKNGGW*PSTALM
Trigger: CATGAGCGCGGTGCTGGGTCACCAGCCGCCGTTCTT...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACTCAGCAGCGAAAAGGTaGGCCTTGACCGCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDSAAKR*ALTAGL
Trigger: CAGCCCCGCGGTCAAGGCTCACCTTTTCGCTGCTGA...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCTCAGCAGCGAAAAGGTaGGCCTTGACCGCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLISAAKR*ALTAGL
Trigger: CAGCCCCGCGGTCAAGGCTCACCTTTTCGCTGCTGA...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACAGGCGGGGCTATGGCGTaGGTCGGGCGACGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTGGAMA*VGRRFV
Trigger: GACAAAGCGTCGCCCGACTCACGCCATAGCCCCGCC...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp AGACCCAGACCAGCCTTGCTGGAAGTTGCTCTGGACATAAATGTTGGAACTCCTCGTCCGTCTGCACCGTaGGCGGCGCGAAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RPRPALLEVALDINVGTPRPSAP*AARRPP
Trigger: AGGAGGCCTTCGCGCCGCTCACGGTGCAGACGGACG...AGGAGTTCCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACCAGGCCTCGGGGCCATaGTCCTCTTTGCTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNQASGP*SSLLSA
Trigger: GGCCGAGAGCAAAGAGGAGCATGGCCCCGAGGCCTG...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACGAGGCCAGGACGTGCTaGTGGAGGTGGAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNEARTC*WRWKGR
Trigger: CCTGCCCTTCCACCTCCAGCAGCACGTCCTGGCCTC...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACAACCGCTGGATGCTCTaGAGTTCGCTGGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDNRWML*SSLVAA
Trigger: GGCGGCCACCAGCGAACTGCAGAGCATCCAGCGGTT...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACATCTACGGGGACGCGCTaGGGGACCTGTCCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTSTGTR*GTCPAW
Trigger: CCAAGCCGGACAGGTCCCGCAGCGCGTCCCCGTAGA...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACGCTCCTCCGACGTGGTaGTGGAGATCTTGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDAPPTW*WRSWPR
Trigger: ACGCGGCCAAGATCTCCACCACCACGTCGGAGGAGC...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACATGGTGGCGGGGCTATaGCGTGAGTCGGGCGACGCT +
Preference number: 4 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNMVAGL*RESGDA
Trigger: AGCGTCGCCCGACTCACGCCATAGCCCCGCCACCAT...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGACCCAGACCAGCCTTGCTGGAAGTTGCTCTGGACATAAATGTTGGAACTCCTCCAGGCCGCGAGTGCTaGACGAGATGGTGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: RPRPALLEVALDINVGTPPGREC*TRWWRG
Trigger: GCCCCGCCACCATCTCGTCCAGCACTCGCGGCCTGG...AGGAGTTCCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACAGGCCCGAGACACCGGTaGAGGCCCCAGAAACCGTGG +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTGPRHR*RPQKPW
Trigger: CCACGGTTTCTGGGGCCTCCACCGGTGTCTCGGGCC...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACGCCGCCCCCACCAATTaGTCCATGATCGGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNAAPTN*SMIGLA
Trigger: GGCCAAGCCGATCATGGATCAATTGGTGGGGGCGGC...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCGCGGGGCTGTCCGGGTaGATGTACATCCTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLIAGLSG*MYILFG
Trigger: GCCAAAGAGGATGTACATTCACCCGGACAGCCCCGC...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACGCGGGGCTGTCCGGGTaGATGTACATCCTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDAGLSG*MYILFG
Trigger: GCCAAAGAGGATGTACATTCACCCGGACAGCCCCGC...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACTGGAGGAGCGGCTGTTaGGTTCAGAGCCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDWRSGC*VQSPSP
Trigger: TGGACTCGGGCTCTGAACTCAACAGCCGCTCCTCCA...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACAGGCCATGCTCCTCTTTaGTCTCGGCCTCGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTGHAPL*SRPRRR
Trigger: GCGACGCCGAGGCCGAGAGCAAAGAGGAGCATGGCC...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACAGCAAACTGGCTGGGGTaGAGGAAGAGCGGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTANWLG*RKSGCP
Trigger: CGGGCACCCGCTCTTCCTGCACCCCAGCCAGTTTGC...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACACCTCCGACGTGGTGGTaGAGATCTTGGCCGCGTCGC +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTPPTWW*RSWPRR
Trigger: GCGACGCGGCCAAGATCTCCACCACCACGTCGGAGG...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACTGCTGGACGAGATGGTaGCGGGGCTATGGCGTGAGT +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDCWTRW*RGYGVS
Trigger: ACTCACGCCATAGCCCCGCCACCATCTCGTCCAGCA...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACGAGTGCTGGACGAGATaGTGGCGGGGCTATGGCGTG +
Preference number: 4 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNECWTR*WRGYGV
Trigger: CACGCCATAGCCCCGCCACCATCTCGTCCAGCACTC...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGACCCAGACCAGCCTTGCTGGAAGTTGCTCTGGACATAAATGTTGGAACTCCTCAGCGGCAGAGGCCATaGCCGTGGAATCCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: RPRPALLEVALDINVGTPQRQRP*PWNPGP
Trigger: CGGGCCTGGATTCCACGGCCATGGCCTCTGCCGCTG...AGGAGTTCCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCTGCTCTGCAGTTCGCTaGTGGCCGCCTCTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLICSAVR*WPPLSP
Trigger: CGGAGAAAGAGGCGGCCACCAGCGAACTGCAGAGCA...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGACCCAGACCAGCCTTGCTGGAAGTTGCTCTGGACATAAATGTTGGAACTCCTCACCTCCCCGCCTGGTaGGCAGAGACCCAGACCAGC +
Preference number: 4 (lower is better)
Translates to: RPRPALLEVALDINVGTPHLPAW*AETQTS
Trigger: GCTGGTCTGGGTCTCTGCCCACCAGGCGGGGAGGTG...AGGAGTTCCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACCTCCCTCTTTCTCGCTaGTGGCGTCTGCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDLPLSR*WRLQLC
Trigger: GCACAGCTGCAGACGCCACCAGCGAGAAAGAGGGAG...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349155.7
CDS-3UTR TCA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACCCACCAATTGATCCATaGTCGGCTTGGCCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNPPIDP*SAWPGR
Trigger: GCGCCCTGGCCAAGCCGATCATGGATCAATTGGTGG...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACAGCCGCCCCCACCAATTaGTCCATGATCGGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTAAPTN*SMIGLA
Trigger: GGCCAAGCCGATCATGGATCAATTGGTGGGGGCGGC...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTAGGGCAGGGCGGTGGTaGGCAGACTGCTGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRRAGRW*ADCCRP
Trigger: CGGACGGCAGCAGTCTGCTCACCACCGCCCTGCCCT...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTAGAGCCCGAGTCCACTaGCACCGAGGCCGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRRARVH*HRGRAG
Trigger: GCCAGCCCGGCCTCGGTGGCAGTGGACTCGGGCTCT...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCTACAGTGGAGGCGGCTaGAGAAGAAGCCTGGGCGAA +
Preference number: 4 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLIYSGGG*RRSLGE
Trigger: TTCGCCCAGGCTTCTTCTCCAGCCGCCTCCACTGTA...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACACAGAGGCCATGGCCGTaGAATCCAGGCCCGAGACAC +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTQRPWP*NPGPRH
Trigger: GTGTCTCGGGCCTGGATTCCACGGCCATGGCCTCTG...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAGGTGGAAGGGCAGGGTaGCCGCGGACGCCCCGGACA +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNEGGRAG*PRTPRT
Trigger: TGTCCGGGGCGTCCGCGGCCACCCTGCCCTTCCACC...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGACCCAGACCAGCCTTGCTGGAAGTTGCTCTGGACATAAATGTTGGAACTCCTGGACCGGCACCGGGATaGAGTAGGGGCTGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: RPRPALLEVALDINVGTPGPAPG*SRGCSA
Trigger: TGCGCTACAGCCCCTACTCCATCCCGGTGCCGGTCC...AGGAGTTCCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACCCGCTAACCAACCGCTaGATGCTCTGCAGTTCGCTG +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDPLTNR*MLCSSL
Trigger: CAGCGAACTGCAGAGCATCCAGCGGTTGGTTAGCGG...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
3UTR CAA 72 bp ACCTCCCCGCCTGGTGGGCAGAGACCCAGACCAGCCTaGCTGGAAGTTGCTCTGGACATAAATGTTGGAACT +
Preference number: 4 (lower is better)
Translates to: TSPPGGQRPRPA*LEVALDINVGT
Trigger: AGTTCCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCTCTGCCCACCAGGCGGGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACCCTGGGCGAAGCAGTTaGAAGCTGCTTGTTCACTGG +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDPGRSS*KLLVHW
Trigger: CCAGTGAACAAGCAGCTTTCAACTGCTTCGCCCAGG...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAGGGCAGGGCGGTGGTaGGCAGACTGCTGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNERAGRW*ADCCRP
Trigger: CGGACGGCAGCAGTCTGCTCACCACCGCCCTGCCCT...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAACGCCCAGGCCGCGAGTaGTGGACGAGATGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNERPGRE*WTRWWR
Trigger: CCGCCACCATCTCGTCCAGCACTCGCGGCCTGGGCG...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGACCCAGACCAGCCTTGCTGGAAGTTGCTCTGGACATAAATGTTGGAACTCCTAGGGCTCCTCCGACGTaGTGGTGGAGATCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: RPRPALLEVALDINVGTPRAPPT*WWRSWP
Trigger: CGGCCAAGATCTCCACCACCACGTCGGAGGAGCCCT...AGGAGTTCCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGACCCAGACCAGCCTTGCTGGAAGTTGCTCTGGACATAAATGTTGGAACTCCTGAGTGCTGGACGAGATaGTGGCGGGGCTATGGCGTG +
Preference number: 4 (lower is better)
Translates to: RPRPALLEVALDINVGTPECWTR*WRGYGV
Trigger: CACGCCATAGCCCCGCCACCATCTCGTCCAGCACTC...AGGAGTTCCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACGAAGGGCTAACGCCATaGCGGGCCCGTGGTTTATTT +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDEGLTP*RARGLF
Trigger: AAATAAACCACGGGCCCGCCATGGCGTTAGCCCTTC...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCTGCTTGTCCCAGGAATaGCCGGATCTCTCATGGAGA +
Preference number: 4 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLICLSQE*PDLSWR
Trigger: TCTCCATGAGAGATCCGGTCATTCCTGGGACAAGCA...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTAAGAACGGCGGCTGGTaGCCCAGCACCGCGCTCATG +
Preference number: 4 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRKNGGW*PSTALM
Trigger: CATGAGCGCGGTGCTGGGTCACCAGCCGCCGTTCTT...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTCGTCCGTCTGCACCGTaGGCGGCGCGAAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: KYIYKSALREMSLNTSPPRPSAP*AARRPP
Trigger: AGGAGGCCTTCGCGCCGCTCACGGTGCAGACGGACG...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACAGCATGGTGTTCAGATTaGGGAAGGGGTGGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTAWCSD*GRGGGA
Trigger: TGCACCGCCACCCCTTCCTCAATCTGAACACCATGC...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTCAGGCCTCGGGGCCATaGTCCTCTTTGCTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRQASGP*SSLLSA
Trigger: GGCCGAGAGCAAAGAGGAGCATGGCCCCGAGGCCTG...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTCCAGGAGGGGACCCATaGCAGCGGCCGCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: KYIYKSALREMSLNTSPPPGGDP*QRPPCW
Trigger: CCAGCATGGCGGCCGCTGGCATGGGTCCCCTCCTGG...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCGCTGGAGAAGAAGCCTaGGCGAAGCAGTTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLIAGEEA*AKQLKA
Trigger: AGCTTTCAACTGCTTCGCCCAGGCTTCTTCTCCAGC...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACATACAGTGGAGGCGGCTaGAGAAGAAGCCTGGGCGAA +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTYSGGG*RRSLGE
Trigger: TTCGCCCAGGCTTCTTCTCCAGCCGCCTCCACTGTA...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTCCTCCGACGTGGTGGTaGAGATCTTGGCCGCGTCGC +
Preference number: 4 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRPPTWW*RSWPRR
Trigger: GCGACGCGGCCAAGATCTCCACCACCACGTCGGAGG...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAACCGTTGAAGAACTGTTaGCCCGCCAGGCCCGGGGCG +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNEPLKNC*PARPGA
Trigger: CGCCCCGGGCCTGGCGGGCCAACAGTTCTTCAACGG...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAACGTGCTGCTGGAGGTaGAAGGGCAGGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNETCCWR*KGRVAA
Trigger: CGCGGCCACCCTGCCCTTCCACCTCCAGCAGCACGT...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTGGACCGGCACCGGGATaGAGTAGGGGCTGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRGPAPG*SRGCSA
Trigger: TGCGCTACAGCCCCTACTCCATCCCGGTGCCGGTCC...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGACCCAGACCAGCCTTGCTGGAAGTTGCTCTGGACATAAATGTTGGAACTCCTTGGGCGACAAGGACATaGAGCTGGAGGAGAGCGTGG +
Preference number: 4 (lower is better)
Translates to: RPRPALLEVALDINVGTPWATRT*SWRRAW
Trigger: CCACGCTCTCCTCCAGCTCCATGTCCTTGTCGCCCA...AGGAGTTCCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACACCGCTAACCAACCGCTaGATGCTCTGCAGTTCGCTG +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTPLTNR*MLCSSL
Trigger: CAGCGAACTGCAGAGCATCCAGCGGTTGGTTAGCGG...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTGAACACCTCCCCGCCTaGTGGGCAGAGACCCAGACC +
Preference number: 4 (lower is better)
Translates to: FISDKVHGSLNWTGMKRREHLPA*WAETQT
Trigger: GGTCTGGGTCTCTGCCCACCAGGCGGGGAGGTGTTC...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACCAATCCAAATCTTGCTaGGCTCTTCTCCCGTGCCTC +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDQSKSC*ALLPCL
Trigger: GAGGCACGGGAGAAGAGCCCAGCAAGATTTGGATTG...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349155.7
CDS-3UTR TCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACTTAAAAAGCCGCTCCTaGACGTCGGTTTCAGAAGCG +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDLKSRS*TSVSEA
Trigger: CGCTTCTGAAACCGACGTTCAGGAGCGGCTTTTTAA...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp AACCACGCCAAGAAGACAGGGGCTGTCTCTAGCACATTCTCTCGAGGGAGTCCGAACACCCTCATGGACTaGAGGGTGAGCTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: NHAKKTGAVSSTFSRGSPNTLMD*RVSCFL
Trigger: AAGAAAACAGCTCACCCTGCAGTCCATGAGGGTGTT...CGGACTCCCTCGAGAGAATGTGCTAGAGACAGCCCCTGTCTTCTTGGCGTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTTCTACGGGGACGCGCTaGGGGACCTGTCCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: KYIYKSALREMSLNTSPPSTGTR*GTCPAW
Trigger: CCAAGCCGGACAGGTCCCGCAGCGCGTCCCCGTAGA...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACAGACCCAGACCAGCCTTaGTGGAAGTTGCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTDPDQP*WKLLWT
Trigger: TGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTC...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAACTCGCTGGTGGCGTCTaGAGCTGTGCTAGACCCGGC +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNELAGGV*SCARPG
Trigger: GCCGGGTCTAGCACAGCTGCAGACGCCACCAGCGAG...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349155.7
CDS-3UTR CCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACCTTCTTCGGGCTCCATaGTCTTCAAAGGCCTCAGAT +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDLLRAP*SSKASD
Trigger: ATCTGAGGCCTTTGAAGACCATGGAGCCCGAAGAAG...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACAAGCTGCTTGTTCACTaGAGGACTCATCAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDKLLVH*RTHQRS
Trigger: GGACCTCTGATGAGTCCTCCAGTGAACAAGCAGCTT...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAATGGTGGTGGAGATCTTaGCCGCGTCGCAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNEWWWRS*PRRRPR
Trigger: CCGAGGCCTGCGACGCGGCCAAGATCTCCACCACCA...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAGGCCCCAGAAACCGTaGCCAGGAGGGGACCCATGC +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNERPQKP*PGGDPC
Trigger: GCATGGGTCCCCTCCTGGCCACGGTTTCTGGGGCCT...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTCAGAGGCCATGGCCGTaGAATCCAGGCCCGAGACAC +
Preference number: 4 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRQRPWP*NPGPRH
Trigger: GTGTCTCGGGCCTGGATTCCACGGCCATGGCCTCTG...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAGCCAGGACGTGCTGCTaGAGGTGGAAGGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNEARTCC*RWKGRV
Trigger: CACCCTGCCCTTCCACCTCCAGCAGCACGTCCTGGC...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACAATGAAAAGACGTGTCTaGGACGGGTCTACGGGGACG +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTMKRRV*DGSTGT
Trigger: CGTCCCCGTAGACCCGTCCCAGACACGTCTTTTCAT...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCGCCATGGCGGGCCCGTaGTTTATTTTATATCCGACA +
Preference number: 4 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLIAMAGP*FILYPT
Trigger: TGTCGGATATAAAATAAACCACGGGCCCGCCATGGC...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCTTGAGGGCAAAGGATTaGGAAAAGGGTAGGGGGCTA +
Preference number: 4 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLILRAKD*EKGRGL
Trigger: TAGCCCCCTACCCTTTTCCCAATCCTTTGCCCTCAA...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAACCCGAGCCCTGCCGCTaGGCTCGAAATAGACACTCC +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNEPEPCR*ARNRHS
Trigger: GGAGTGTCTATTTCGAGCTCAGCGGCAGGGCTCGGG...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACACCTCCCTTGGGTCACTaGTTTGAGGGCAAAGGATTG +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTPPLGH*FEGKGL
Trigger: CAATCCTTTGCCCTCAAATCAGTGACCCAAGGGAGG...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp AACCACGCCAAGAAGACAGGGGCTGTCTCTAGCACATTCTCTCGAGGGAGTCCGCCTTGTCCTAAAACGTaGGCGAATTCGCTTCCTAAA +
Preference number: 4 (lower is better)
Translates to: NHAKKTGAVSSTFSRGSPPCPKT*ANSLPK
Trigger: TTTAGGAAGCGAATTCGCTCACGTTTTAGGACAAGG...CGGACTCCCTCGAGAGAATGTGCTAGAGACAGCCCCTGTCTTCTTGGCGTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349155.7
CDS-3UTR GCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAACCGCTGGATGCTCTaGAGTTCGCTGGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNENRWML*SSLVAA
Trigger: GGCGGCCACCAGCGAACTGCAGAGCATCCAGCGGTT...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCTTTCAATCCAAATCTTaGTGGGCTCTTCTCCCGTGC +
Preference number: 4 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLIFQSKS*WALLPC
Trigger: GCACGGGAGAAGAGCCCAGCAAGATTTGGATTGAAA...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000349155.7
CDS-3UTR CCA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACAGGGGAAGTGTCTTTTaGAGAATGGGAGGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNRGSVF*RMGGRF
Trigger: AAAGCGGCCTCCCATTCTCCAAAAGACACTTCCCCT...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCAATGTACATCCTCTTTaGCATTTCGGGGTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLINVHPL*HFGVGL
Trigger: AAGGCCGACCCCGAAATGCCAAAGAGGATGTACATT...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACAATGTACATCCTCTTTaGCATTTCGGGGTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDNVHPL*HFGVGL
Trigger: AAGGCCGACCCCGAAATGCCAAAGAGGATGTACATT...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACCGTAGCGTGATCACTTaGGAAGGCCAAAGTAAATCC +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDRSVIT*EGQSKS
Trigger: GGATTTACTTTGGCCTTCCCAAGTGATCACGCTACG...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257566.7
CDS-3UTR CCA 90 bp AGACCCAGACCAGCCTTGCTGGAAGTTGCTCTGGACATAAATGTTGGAACTCCTTCGATGTCCCTACAGTaGAGGCGGCTGGAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: RPRPALLEVALDINVGTPSMSLQ*RRLEKK
Trigger: CTTCTTCTCCAGCCGCCTCCACTGTAGGGACATCGA...AGGAGTTCCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTAGGCCCCAGAAACCGTaGCCAGGAGGGGACCCATGC +
Preference number: 4 (lower is better)
Translates to: KYIYKSALREMSLNTSPPRPQKP*PGGDPC
Trigger: GCATGGGTCCCCTCCTGGCCACGGTTTCTGGGGCCT...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTGCCAGGACGTGCTGCTaGAGGTGGAAGGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: KYIYKSALREMSLNTSPPARTCC*RWKGRV
Trigger: CACCCTGCCCTTCCACCTCCAGCAGCACGTCCTGGC...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTTTCCGAAAGGGGACATaGCCAGGCCCTGAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRFRKGT*PGPERP
Trigger: TGGCCTCTCAGGGCCTGGCCATGTCCCCTTTCGGAA...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAATCTGCAGTTCGCTGGTaGCCGCCTCTTTCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNESAVRW*PPLSPR
Trigger: GCGCGGAGAAAGAGGCGGCCACCAGCGAACTGCAGA...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTCCCGAGCCCTGCCGCTaGGCTCGAAATAGACACTCC +
Preference number: 4 (lower is better)
Translates to: KYIYKSALREMSLNTSPPPEPCR*ARNRHS
Trigger: GGAGTGTCTATTTCGAGCTCAGCGGCAGGGCTCGGG...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAACCACCAATTGATCCATaGTCGGCTTGGCCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNEPPIDP*SAWPGR
Trigger: GCGCCCTGGCCAAGCCGATCATGGATCAATTGGTGG...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACTCAGTTTGTGGAAAGTaGCGACTTTGGACATCCACT +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDSVCGK*RLWTST
Trigger: AGTGGATGTCCAAAGTCGTCACTTTCCACAAACTGA...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTAGAGCGGGTGCCCGTTaGAGAACTGTTGGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: KYIYKSALREMSLNTSPPRAGAR*RTVGPP
Trigger: TGGCGGGCCAACAGTTCTTCAACGGGCACCCGCTCT...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTGCATGGTGTTCAGATTaGGGAAGGGGTGGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRAWCSD*GRGGGA
Trigger: TGCACCGCCACCCCTTCCTCAATCTGAACACCATGC...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp AACCACGCCAAGAAGACAGGGGCTGTCTCTAGCACATTCTCTCGAGGGAGTCCGGACCTACAGCGGCTCTaGAAACATCACAAGAATATT +
Preference number: 4 (lower is better)
Translates to: NHAKKTGAVSSTFSRGSPDLQRL*KHHKNI
Trigger: AATATTCTTGTGATGTTTTCAGAGCCGCTGTAGGTC...CGGACTCCCTCGAGAGAATGTGCTAGAGACAGCCCCTGTCTTCTTGGCGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACACCGTCCTTGTGCCTTaGGTTTTTAAAAAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNTVLVP*VFKKPL
Trigger: GAGCGGCTTTTTAAAAACGCAAGGCACAAGGACGGT...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCGGGGCTGGTATTTGTaGATGGAGTTCAATATAGTC +
Preference number: 4 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLIRGWYL*MEFNIV
Trigger: GACTATATTGAACTCCATGCACAAATACCAGCCCCG...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000257566.7
CDS-3UTR GCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACAGCCTTGCTGGAAGTTaGTCTGGACATAAATGTTGG +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDSLAGS*SGHKCW
Trigger: CCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCT...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp AACCACGCCAAGAAGACAGGGGCTGTCTCTAGCACATTCTCTCGAGGGAGTCCGCGGGGCTGGTATTTGTaGATGGAGTTCAATATAGTA +
Preference number: 4 (lower is better)
Translates to: NHAKKTGAVSSTFSRGSPRGWYL*MEFNIV
Trigger: TACTATATTGAACTCCATGCACAAATACCAGCCCCG...CGGACTCCCTCGAGAGAATGTGCTAGAGACAGCCCCTGTCTTCTTGGCGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349155.7
CDS-3UTR CCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAATGCTGGACGAGATGGTaGCGGGGCTATGGCGTGAGT +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNECWTRW*RGYGVS
Trigger: ACTCACGCCATAGCCCCGCCACCATCTCGTCCAGCA...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAATTCCGAAAGGGGACATaGCCAGGCCCTGAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNEFRKGT*PGPERP
Trigger: TGGCCTCTCAGGGCCTGGCCATGTCCCCTTTCGGAA...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTTCTCCGCGCAGAGTTTaGGCGACAAGGACATGGAGC +
Preference number: 4 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRSPRRV*ATRTWS
Trigger: GCTCCATGTCCTTGTCGCCCAAACTCTGCGCGGAGA...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAATGCTCTGCAGTTCGCTaGTGGCCGCCTCTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNECSAVR*WPPLSP
Trigger: CGGAGAAAGAGGCGGCCACCAGCGAACTGCAGAGCA...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACAATTTGAAGTGGAGCTaGAAAGTGGCACTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNNLKWS*KVALLP
Trigger: GGGAAGGAGTGCCACTTTCCAGCTCCACTTCAAATT...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACAATGCAGTCACAGCGATaGATTCAGTTTCGGGGAACA +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTMQSQR*IQFRGT
Trigger: TGTTCCCCGAAACTGAATTCATCGCTGTGACTGCAT...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTTGGAGGAGCGGCTGTTaGGTTCAGAGCCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: KYIYKSALREMSLNTSPPWRSGC*VQSPSP
Trigger: TGGACTCGGGCTCTGAACTCAACAGCCGCTCCTCCA...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACACTTGGGTCACTGATTTaGGGGCAAAGGATTGGGAAA +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTLGSLI*GQRIGK
Trigger: TTTCCCAATCCTTTGCCCTCAAATCAGTGACCCAAG...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCTGTCAAAGAACGACATaGATCCTGCTACAGAGCTTA +
Preference number: 4 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLICQRTT*ILLQSL
Trigger: TAAGCTCTGTAGCAGGATTCATGTCGTTCTTTGACA...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACAGCGCTATCAAAACTTaGATTGCAAACTGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNSAIKT*IANWLP
Trigger: CGGAAGCCAGTTTGCAATTCAAGTTTTGATAGCGCT...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349155.7
CDS-3UTR GCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACAGAAGCAGTTGAAAGCTaGTTGTTCACTGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTEAVES*LFTGGL
Trigger: GAGTCCTCCAGTGAACAAGCAGCTTTCAACTGCTTC...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTGACCCAGACCAGCCTTaGTGGAAGTTGCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRDPDQP*WKLLWT
Trigger: TGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTC...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGACCCAGACCAGCCTTGCTGGAAGTTGCTCTGGACATAAATGTTGGAACTCCTCTTCTTCGGGCTCCATaGTCTTCAAAGGCCTCAGAT +
Preference number: 4 (lower is better)
Translates to: RPRPALLEVALDINVGTPLLRAP*SSKASD
Trigger: ATCTGAGGCCTTTGAAGACCATGGAGCCCGAAGAAG...AGGAGTTCCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AACCACGCCAAGAAGACAGGGGCTGTCTCTAGCACATTCTCTCGAGGGAGTCCGACATCTCACTTTAAATaGAGGAAACATTCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: NHAKKTGAVSSTFSRGSPTSHFK*RKHSPS
Trigger: GGAAGGCGAATGTTTCCTCCATTTAAAGTGAGATGT...CGGACTCCCTCGAGAGAATGTGCTAGAGACAGCCCCTGTCTTCTTGGCGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACATTGGCTCTTACAATGTaGAACCGGGGCTGGTATTTG +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTLALTM*NRGWYL
Trigger: CAAATACCAGCCCCGGTTCCACATTGTAAGAGCCAA...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGACCCAGACCAGCCTTGCTGGAAGTTGCTCTGGACATAAATGTTGGAACTCCTAAGCTGCTTGTTCACTaGAGGACTCATCAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: RPRPALLEVALDINVGTPKLLVH*RTHQRS
Trigger: GGACCTCTGATGAGTCCTCCAGTGAACAAGCAGCTT...AGGAGTTCCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTTCGATGTCCCTACAGTaGAGGCGGCTGGAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRSMSLQ*RRLEKK
Trigger: CTTCTTCTCCAGCCGCCTCCACTGTAGGGACATCGA...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTTGGGCGACAAGGACATaGAGCTGGAGGAGAGCGTGG +
Preference number: 4 (lower is better)
Translates to: KYIYKSALREMSLNTSPPWATRT*SWRRAW
Trigger: CCACGCTCTCCTCCAGCTCCATGTCCTTGTCGCCCA...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGACCCAGACCAGCCTTGCTGGAAGTTGCTCTGGACATAAATGTTGGAACTCCTTTGAGGGCAAAGGATTaGGAAAAGGGTAGGGGGCTA +
Preference number: 4 (lower is better)
Translates to: RPRPALLEVALDINVGTPLRAKD*EKGRGL
Trigger: TAGCCCCCTACCCTTTTCCCAATCCTTTGCCCTCAA...AGGAGTTCCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTCCCTGCCACGTAGCGTaGTCACTTGGGAAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: KYIYKSALREMSLNTSPPPCHVA*SLGKAK
Trigger: TTTGGCCTTCCCAAGTGATCACGCTACGTGGCAGGG...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257566.7
CDS-3UTR TCA 90 bp AGACCCAGACCAGCCTTGCTGGAAGTTGCTCTGGACATAAATGTTGGAACTCCTATGCAGTCACAGCGATaGATTCAGTTTCGGGGAACA +
Preference number: 4 (lower is better)
Translates to: RPRPALLEVALDINVGTPMQSQR*IQFRGT
Trigger: TGTTCCCCGAAACTGAATTCATCGCTGTGACTGCAT...AGGAGTTCCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCTTAACAGCAATTCTGTaGCCTGGAAATAAACCCAAC +
Preference number: 4 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLILTAIL*PGNKPN
Trigger: GTTGGGTTTATTTCCAGGTCACAGAATTGCTGTTAA...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGCAGACAACTCTTTTaGAAGGGTATTGGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNCRQLF*KGIGVG
Trigger: ACCAACACCAATACCCTTTCAAAAGAGTTGTCTGCA...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACAAGCCTTGCTGGAAGTTaGTCTGGACATAAATGTTGG +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTSLAGS*SGHKCW
Trigger: CCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCT...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGACCCAGACCAGCCTTGCTGGAAGTTGCTCTGGACATAAATGTTGGAACTCCTTTGGCTCTTACAATGTaGAACCGGGGCTGGTATTTG +
Preference number: 4 (lower is better)
Translates to: RPRPALLEVALDINVGTPLALTM*NRGWYL
Trigger: CAAATACCAGCCCCGGTTCCACATTGTAAGAGCCAA...AGGAGTTCCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTGCTGGAGAAGAAGCCTaGGCGAAGCAGTTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRAGEEA*AKQLKA
Trigger: AGCTTTCAACTGCTTCGCCCAGGCTTCTTCTCCAGC...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTTCTCCGCGCAGAGTTTaGGCGACAAGGACATGGAGC +
Preference number: 4 (lower is better)
Translates to: KYIYKSALREMSLNTSPPSPRRV*ATRTWS
Trigger: GCTCCATGTCCTTGTCGCCCAAACTCTGCGCGGAGA...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAGAAGGGCTAACGCCATaGCGGGCCCGTGGTTTATTT +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNEEGLTP*RARGLF
Trigger: AAATAAACCACGGGCCCGCCATGGCGTTAGCCCTTC...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTCCTGGGCGAAGCAGTTaGAAGCTGCTTGTTCACTGG +
Preference number: 4 (lower is better)
Translates to: KYIYKSALREMSLNTSPPPGRSS*KLLVHW
Trigger: CCAGTGAACAAGCAGCTTTCAACTGCTTCGCCCAGG...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAACCTCCCTTGGGTCACTaGTTTGAGGGCAAAGGATTG +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNEPPLGH*FEGKGL
Trigger: CAATCCTTTGCCCTCAAATCAGTGACCCAAGGGAGG...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACATGTCAAAGAACGACATaGATCCTGCTACAGAGCTTA +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTCQRTT*ILLQSL
Trigger: TAAGCTCTGTAGCAGGATTCATGTCGTTCTTTGACA...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCTGACTTTTGAACTGTaGATATATCTCTATAGGCAG +
Preference number: 4 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLILTFEL*IYLYRQ
Trigger: CTGCCTATAGAGATATATTCACAGTTCAAAAGTCAG...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACCTGACTTTTGAACTGTaGATATATCTCTATAGGCAG +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDLTFEL*IYLYRQ
Trigger: CTGCCTATAGAGATATATTCACAGTTCAAAAGTCAG...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp AACCACGCCAAGAAGACAGGGGCTGTCTCTAGCACATTCTCTCGAGGGAGTCCGTCATTTTATGTGTTTTaGCCACTCCTTCCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: NHAKKTGAVSSTFSRGSPSFYVF*PLLPFK
Trigger: TTTAAAGGGAAGGAGTGGGCAAAACACATAAAATGA...CGGACTCCCTCGAGAGAATGTGCTAGAGACAGCCCCTGTCTTCTTGGCGTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp AACCACGCCAAGAAGACAGGGGCTGTCTCTAGCACATTCTCTCGAGGGAGTCCGACAAAACCTGACAGTTaGAATTCTATTTACACAGAG +
Preference number: 4 (lower is better)
Translates to: NHAKKTGAVSSTFSRGSPTKPDS*NSIYTE
Trigger: CTCTGTGTAAATAGAATTGCAACTGTCAGGTTTTGT...CGGACTCCCTCGAGAGAATGTGCTAGAGACAGCCCCTGTCTTCTTGGCGTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACGTTTCAAGATGTCATTaGCTCTTACAATGTGGAACC +
Preference number: 4 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNVSRCH*LLQCGT
Trigger: GGTTCCACATTGTAAGAGCCAATGACATCTTGAAAC...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACGTTATCTTATCATTCTaGTATGCAGTCACAGCGATG +
Preference number: 4 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNVILSF*YAVTAM
Trigger: CATCGCTGTGACTGCATACCAGAATGATAAGATAAC...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTCACGGCAGCCTGAACTaGACTGGAATGAAAAGACGT +
Preference number: 4 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRHGSLN*TGMKRR
Trigger: ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTG...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACACAAATACATTACTGTaGACATGCAAGAAGAGACCT +
Preference number: 4 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDTNTLL*TCKKRP
Trigger: AGGTCTCTTCTTGCATGTCCACAGTAATGTATTTGT...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTAACACCCTCATGGACTaGAGGGTGAGCTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRNTLMD*RVSCFL
Trigger: AAGAAAACAGCTCACCCTGCAGTCCATGAGGGTGTT...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAGGGGAAGTGTCTTTTaGAGAATGGGAGGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNERGSVF*RMGGRF
Trigger: AAAGCGGCCTCCCATTCTCCAAAAGACACTTCCCCT...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACAACATCTCACTTTAAATaGAGGAAACATTCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTTSHFK*RKHSPS
Trigger: GGAAGGCGAATGTTTCCTCCATTTAAAGTGAGATGT...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AGACCCAGACCAGCCTTGCTGGAAGTTGCTCTGGACATAAATGTTGGAACTCCTGTGAGTTTCAGTTTGTaGAAAGTGACGACTTTGGAC +
Preference number: 4 (lower is better)
Translates to: RPRPALLEVALDINVGTPVSFSL*KVTTLD
Trigger: GTCCAAAGTCGTCACTTTCCACAAACTGAAACTCAC...AGGAGTTCCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACAGTTTCAAGATGTCATTaGCTCTTACAATGTGGAACC +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTVSRCH*LLQCGT
Trigger: GGTTCCACATTGTAAGAGCCAATGACATCTTGAAAC...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAACACGGCAGCCTGAACTaGACTGGAATGAAAAGACGT +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNEHGSLN*TGMKRR
Trigger: ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTG...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTAATTTGAAGTGGAGCTaGAAAGTGGCACTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRNLKWS*KVALLP
Trigger: GGGAAGGAGTGCCACTTTCCAGCTCCACTTCAAATT...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTTTAAAAAGCCGCTCCTaGACGTCGGTTTCAGAAGCG +
Preference number: 4 (lower is better)
Translates to: KYIYKSALREMSLNTSPPLKSRS*TSVSEA
Trigger: CGCTTCTGAAACCGACGTTCAGGAGCGGCTTTTTAA...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTTGGGACATAAATCTTTaGGGTTCGATGTCCCTACAG +
Preference number: 4 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRWDINL*GSMSLQ
Trigger: CTGTAGGGACATCGAACCTCAAAGATTTATGTCCCA...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACATGCTCAGTAATTTATTaGGAACCGATAATGCAAGTC +
Preference number: 4 (lower is better)
Translates to: EPPESDPDPGHINHAKKTCSVIY*EPIMQV
Trigger: GACTTGCATTATCGGTTCTCAATAAATTACTGAGCA...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAACTTGGGTCACTGATTTaGGGGCAAAGGATTGGGAAA +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNELGSLI*GQRIGK
Trigger: TTTCCCAATCCTTTGCCCTCAAATCAGTGACCCAAG...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAACCGTCCTTGTGCCTTaGGTTTTTAAAAAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNETVLVP*VFKKPL
Trigger: GAGCGGCTTTTTAAAAACGCAAGGCACAAGGACGGT...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTCATTTTATGTGTTTTaGCCACTCCTTCCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNSFYVF*PLLPFK
Trigger: TTTAAAGGGAAGGAGTGGGCAAAACACATAAAATGA...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAACAGCCTGAACTGGACTaGAATGAAAAGACGTGTCTG +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNEQPELD*NEKTCL
Trigger: CAGACACGTCTTTTCATTCCAGTCCAGTTCAGGCTG...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTGCCATGGCGGGCCCGTaGTTTATTTTATATCCGACA +
Preference number: 4 (lower is better)
Translates to: KYIYKSALREMSLNTSPPAMAGP*FILYPT
Trigger: TGTCGGATATAAAATAAACCACGGGCCCGCCATGGC...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAATGGGACATAAATCTTTaGGGTTCGATGTCCCTACAG +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNEWDINL*GSMSLQ
Trigger: CTGTAGGGACATCGAACCTCAAAGATTTATGTCCCA...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp AGACCCAGACCAGCCTTGCTGGAAGTTGCTCTGGACATAAATGTTGGAACTCCTTGCTCAGTAATTTATTaGGAACCGATAATGCAAGTC +
Preference number: 4 (lower is better)
Translates to: RPRPALLEVALDINVGTPCSVIY*EPIMQV
Trigger: GACTTGCATTATCGGTTCTCAATAAATTACTGAGCA...AGGAGTTCCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTCAGCCTGAACTGGACTaGAATGAAAAGACGTGTCTG +
Preference number: 4 (lower is better)
Translates to: KYIYKSALREMSLNTSPPQPELD*NEKTCL
Trigger: CAGACACGTCTTTTCATTCCAGTCCAGTTCAGGCTG...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTCTTTTGAAAGGGTATTaGTGTTGGTGCAGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRLLKGY*CWCRKC
Trigger: ACACTTCCTGCACCAACACCAATACCCTTTCAAAAG...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAGACCTACAGCGGCTCTaGAAACATCACAAGAATATT +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNEDLQRL*KHHKNI
Trigger: AATATTCTTGTGATGTTTTCAGAGCCGCTGTAGGTC...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTAATTCCACTTCGTTTTaGGGAAATCAGAGACTAGCA +
Preference number: 4 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRNSTSF*GNQRLA
Trigger: TGCTAGTCTCTGATTTCCTCAAAACGAAGTGGAATT...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTCTTATCATTCTGGTATaGAGTCACAGCGATGAATTC +
Preference number: 4 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRLIILV*SHSDEF
Trigger: GAATTCATCGCTGTGACTGCATACCAGAATGATAAG...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAGTGAGTTTCAGTTTGTaGAAAGTGACGACTTTGGAC +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNEVSFSL*KVTTLD
Trigger: GTCCAAAGTCGTCACTTTCCACAAACTGAAACTCAC...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTTGCAGACAACTCTTTTaGAAGGGTATTGGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: KYIYKSALREMSLNTSPPCRQLF*KGIGVG
Trigger: ACCAACACCAATACCCTTTCAAAAGAGTTGTCTGCA...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAGTTATCTTATCATTCTaGTATGCAGTCACAGCGATG +
Preference number: 4 (lower is better)
Translates to: GLFYIRQSARQPELDWNEVILSF*YAVTAM
Trigger: CATCGCTGTGACTGCATACCAGAATGATAAGATAAC...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTACAAATACATTACTGTaGACATGCAAGAAGAGACCT +
Preference number: 4 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRTNTLL*TCKKRP
Trigger: AGGTCTCTTCTTGCATGTCCACAGTAATGTATTTGT...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CCA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTCTTTTGAAAGGGTATTaGTGTTGGTGCAGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: KYIYKSALREMSLNTSPPLLKGY*CWCRKC
Trigger: ACACTTCCTGCACCAACACCAATACCCTTTCAAAAG...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTTTAACAGCAATTCTGTaGCCTGGAAATAAACCCAAC +
Preference number: 4 (lower is better)
Translates to: KYIYKSALREMSLNTSPPLTAIL*PGNKPN
Trigger: GTTGGGTTTATTTCCAGGTCACAGAATTGCTGTTAA...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR TCA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTCTTTTGTTGCAAATGTaGAAGGTTCTCCTAGAAGAC +
Preference number: 4 (lower is better)
Translates to: KYIYKSALREMSLNTSPPLLLQM*KVLLED
Trigger: GTCTTCTAGGAGAACCTTTCACATTTGCAACAAAAG...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349155.7
CDS-3UTR GCA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTCTTATCATTCTGGTATaGAGTCACAGCGATGAATTC +
Preference number: 4 (lower is better)
Translates to: KYIYKSALREMSLNTSPPLIILV*SHSDEF
Trigger: GAATTCATCGCTGTGACTGCATACCAGAATGATAAG...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTACAAAACCTGACAGTTaGAATTCTATTTACACAGAG +
Preference number: 4 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRTKPDS*NSIYTE
Trigger: CTCTGTGTAAATAGAATTGCAACTGTCAGGTTTTGT...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR GCA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTTATCAAAACTTGAATTaGAAACTGGCTTCCGTTCGC +
Preference number: 4 (lower is better)
Translates to: KYIYKSALREMSLNTSPPYQNLN*KLASVR
Trigger: GCGAACGGAAGCCAGTTTGCAATTCAAGTTTTGATA...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349155.7
3UTR CAA 72 bp AATGTTGCAGACAACTCTTTTGAAAGGGTATTGGTGTaGGTGCAGGAAGTGTGTTTTCTAGTGTTAACAGCA +
Preference number: 4 (lower is better)
Translates to: NVADNSFERVLV*VQEVCFLVLTA
Trigger: TGCTGTTAACACTAGAAAACACACTTCCTGCACCAACACCAATACCCTTTCAAAAGAGTTGTCTGCAACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS GCA 90 bp AGTCCACTGCCACCGAGGCCGGGCTGGCGGCCAGGGCGGCGACTTTaGCGTCCAGGGGCCCCGCGGCCGCCGCCATGGAGGGCAGGGCGG +
Preference number: 5 (lower is better)
Translates to: SPLPPRPGWRPGRRL*RPGAPRPPPWRAGR
Trigger: CCGCCCTGCCCTCCATGGCGGCGGCCGCGGGGCCCCTGGACGGCAAAGTCGCCGCCCTGGCCGCCAGCCCGGCCTCGGTGGCAGTGGACT
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS GCA 90 bp CCTTGCCCGGGAGCGCGCGCGCCTCTTCCACCTTGGCCGGCGCTGTaGCCTCGCGAACCGGGCTCCTGCGCTCCTCCGCGCCCAGGCCGC +
Preference number: 5 (lower is better)
Translates to: PCPGARAPLPPWPAL*PREPGSCAPPRPGR
Trigger: GCGGCCTGGGCGCGGAGGAGCGCAGGAGCCCGGTTCGCGAGGGCACAGCGCCGGCCAAGGTGGAAGAGGCGCGCGCGCTCCCGGGCAAGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 90 bp GCGCGAAGGCCTCCTTGCCCGGGAGCGCGCGCGCCTCTTCCACCTTaGCCGGCGCTGTGCCCTCGCGAACCGGGCTCCTGCGCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: ARRPPCPGARAPLPP*PALCPREPGSCAPP
Trigger: CGGAGGAGCGCAGGAGCCCGGTTCGCGAGGGCACAGCGCCGGCCAAGGTGGAAGAGGCGCGCGCGCTCCCGGGCAAGGAGGCCTTCGCGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS TCA 90 bp GCCCAGGCCGCGAGTGCTGGACGAGATGGTGGCGGGGCTATGGCGTaGGTCGGGCGACGCTTTGTCCAGCCGCCCGCTGTCCCGGGGCCG +
Preference number: 5 (lower is better)
Translates to: AQAASAGRDGGGAMA*VGRRFVQPPAVPGP
Trigger: CGGCCCCGGGACAGCGGGCGGCTGGACAAAGCGTCGCCCGACTCACGCCATAGCCCCGCCACCATCTCGTCCAGCACTCGCGGCCTGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS GCA 90 bp CCTCGCGAACCGGGCTCCTGCGCTCCTCCGCGCCCAGGCCGCGAGTaGTGGACGAGATGGTGGCGGGGCTATGGCGTGAGTCGGGCGACG +
Preference number: 5 (lower is better)
Translates to: PREPGSCAPPRPGRE*WTRWWRGYGVSRAT
Trigger: CGTCGCCCGACTCACGCCATAGCCCCGCCACCATCTCGTCCAGCACTCGCGGCCTGGGCGCGGAGGAGCGCAGGAGCCCGGTTCGCGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS GCA 90 bp TGGAGGTGGAAGGGCAGGGTGGCCGCGGACGCCCCGGACAGTCCCTaGGCCGCAGCGGCAGAGGCCATGGCCGTGGAATCCAGGCCCGAG +
Preference number: 5 (lower is better)
Translates to: WRWKGRVAADAPDSP*AAAAEAMAVESRPE
Trigger: CTCGGGCCTGGATTCCACGGCCATGGCCTCTGCCGCTGCGGCGCAGGGACTGTCCGGGGCGTCCGCGGCCACCCTGCCCTTCCACCTCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS GCA 90 bp CCTCTTCCACCTTGGCCGGCGCTGTGCCCTCGCGAACCGGGCTCCTaGGCTCCTCCGCGCCCAGGCCGCGAGTGCTGGACGAGATGGTGG +
Preference number: 5 (lower is better)
Translates to: PLPPWPALCPREPGS*APPRPGRECWTRWW
Trigger: CCACCATCTCGTCCAGCACTCGCGGCCTGGGCGCGGAGGAGCGCAGGAGCCCGGTTCGCGAGGGCACAGCGCCGGCCAAGGTGGAAGAGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 90 bp TCCGCGCCCAGGCCGCGAGTGCTGGACGAGATGGTGGCGGGGCTATaGCGTGAGTCGGGCGACGCTTTGTCCAGCCGCCCGCTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: SAPRPRVLDEMVAGL*RESGDALSSRPLSR
Trigger: CCGGGACAGCGGGCGGCTGGACAAAGCGTCGCCCGACTCACGCCATAGCCCCGCCACCATCTCGTCCAGCACTCGCGGCCTGGGCGCGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 90 bp CGCGAACCGGGCTCCTGCGCTCCTCCGCGCCCAGGCCGCGAGTGCTaGACGAGATGGTGGCGGGGCTATGGCGTGAGTCGGGCGACGCTT +
Preference number: 5 (lower is better)
Translates to: REPGSCAPPRPGREC*TRWWRGYGVSRATL
Trigger: AAGCGTCGCCCGACTCACGCCATAGCCCCGCCACCATCTCGTCCAGCACTCGCGGCCTGGGCGCGGAGGAGCGCAGGAGCCCGGTTCGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 90 bp TCCTGCGCTCCTCCGCGCCCAGGCCGCGAGTGCTGGACGAGATGGTaGCGGGGCTATGGCGTGAGTCGGGCGACGCTTTGTCCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: SCAPPRPGRECWTRW*RGYGVSRATLCPAA
Trigger: GGCGGCTGGACAAAGCGTCGCCCGACTCACGCCATAGCCCCGCCACCATCTCGTCCAGCACTCGCGGCCTGGGCGCGGAGGAGCGCAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 90 bp GGCTCCTGCGCTCCTCCGCGCCCAGGCCGCGAGTGCTGGACGAGATaGTGGCGGGGCTATGGCGTGAGTCGGGCGACGCTTTGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: GSCAPPRPGRECWTR*WRGYGVSRATLCPA
Trigger: GGCTGGACAAAGCGTCGCCCGACTCACGCCATAGCCCCGCCACCATCTCGTCCAGCACTCGCGGCCTGGGCGCGGAGGAGCGCAGGAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS GCA 90 bp GGAGAGCGTGGAGGAGCGGCTGTTGAGTTCAGAGCCCGAGTCCACTaGCACCGAGGCCGGGCTGGCGGCCAGGGCGGCGACTTTGCCGTC +
Preference number: 5 (lower is better)
Translates to: GERGGAAVEFRARVH*HRGRAGGQGGDFAV
Trigger: GACGGCAAAGTCGCCGCCCTGGCCGCCAGCCCGGCCTCGGTGGCAGTGGACTCGGGCTCTGAACTCAACAGCCGCTCCTCCACGCTCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 90 bp CCGCGGGGCTGCCCTTGTCACGGCAGGGCTCCTCCGACGTGGTGGTaGAGATCTTGGCCGCGTCGCAGGCCTCGGGGCCATGCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: PRGCPCHGRAPPTWW*RSWPRRRPRGHAPL
Trigger: AAGAGGAGCATGGCCCCGAGGCCTGCGACGCGGCCAAGATCTCCACCACCACGTCGGAGGAGCCCTGCCGTGACAAGGGCAGCCCCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 90 bp CAGCGGCAGAGGCCATGGCCGTGGAATCCAGGCCCGAGACACCGGTaGAGGCCCCAGAAACCGTGGCCAGGAGGGGACCCATGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: QRQRPWPWNPGPRHR*RPQKPWPGGDPCQR
Trigger: CCGCTGGCATGGGTCCCCTCCTGGCCACGGTTTCTGGGGCCTCCACCGGTGTCTCGGGCCTGGATTCCACGGCCATGGCCTCTGCCGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS GCA 90 bp GACGTGGTGGTGGAGATCTTGGCCGCGTCGCAGGCCTCGGGGCCATaGTCCTCTTTGCTCTCGGCCTCGGCGTCGCTCTCACCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: DVVVEILAASQASGP*SSLLSASASLSPSL
Trigger: CAGCGAGGGTGAGAGCGACGCCGAGGCCGAGAGCAAAGAGGAGCATGGCCCCGAGGCCTGCGACGCGGCCAAGATCTCCACCACCACGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS GCA 90 bp GGTGTTCAGATTGAGGAAGGGGTGGCGGTGCACCGAGCTGGAGGCTaGCGCAGAGGAGGCGGCCGCCGCTGCGGCCATGTACGTGTAGGG +
Preference number: 5 (lower is better)
Translates to: GVQIEEGVAVHRAGG*RRGGGRRCGHVRVG
Trigger: CCCTACACGTACATGGCCGCAGCGGCGGCCGCCTCCTCTGCGGCAGCCTCCAGCTCGGTGCACCGCCACCCCTTCCTCAATCTGAACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 90 bp TCAGCGCGGGGAAGAACGGCGGCTGGTGACCCAGCACCGCGCTCATaGCGAAGTCCGGCGCCCGGTGAGGTAGGAACGGATGGTAGGCCA +
Preference number: 5 (lower is better)
Translates to: SARGRTAAGDPAPRS*RSPAPGEVGTDGRP
Trigger: TGGCCTACCATCCGTTCCTACCTCACCGGGCGCCGGACTTCGCCATGAGCGCGGTGCTGGGTCACCAGCCGCCGTTCTTCCCCGCGCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257566.7
ENST00000349155.7
ENST00000552054.1
CDS TCA 90 bp TGGAGTAGGGGCTGTAGCGCAGCCGCGGGCGCATGGTGTTCAGATTaGGGAAGGGGTGGCGGTGCACCGAGCTGGAGGCTGCCGCAGAGG +
Preference number: 5 (lower is better)
Translates to: WSRGCSAAAGAWCSD*GRGGGAPSWRLPQR
Trigger: CCTCTGCGGCAGCCTCCAGCTCGGTGCACCGCCACCCCTTCCTCAATCTGAACACCATGCGCCCGCGGCTGCGCTACAGCCCCTACTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS TCA 90 bp GCGACAAGGACATGGAGCTGGAGGAGAGCGTGGAGGAGCGGCTGTTaGGTTCAGAGCCCGAGTCCACTGCCACCGAGGCCGGGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: ATRTWSWRRAWRSGC*VQSPSPLPPRPGWR
Trigger: CCGCCAGCCCGGCCTCGGTGGCAGTGGACTCGGGCTCTGAACTCAACAGCCGCTCCTCCACGCTCTCCTCCAGCTCCATGTCCTTGTCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS TCA 90 bp CGAGAGGAGCGAGCAGGGTCTCGACTCGCGCCCGAGCCCTGCCGCTaGGCTCGAAATAGACACTCCAGCCCTGCGTCCCAGGAATCTCTC +
Preference number: 5 (lower is better)
Translates to: REERAGSRLAPEPCR*ARNRHSSPASQESL
Trigger: GAGAGATTCCTGGGACGCAGGGCTGGAGTGTCTATTTCGAGCTCAGCGGCAGGGCTCGGGCGCGAGTCGAGACCCTGCTCGCTCCTCTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349155.7
CDS-3UTR CAA 90 bp AACCACGCCAAGAAGACAGGGGCTGTCTCTAGCACATTCTCTCGAGGGAGTCCGCGCGCCTCTTCCACCTaGGCCGGCGCTGTGCCCTCG +
Preference number: 5 (lower is better)
Translates to: NHAKKTGAVSSTFSRGSPRASST*AGAVPS
Trigger: CGAGGGCACAGCGCCGGCCAAGGTGGAAGAGGCGCG...CGGACTCCCTCGAGAGAATGTGCTAGAGACAGCCCCTGTCTTCTTGGCGTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS GCA 90 bp CTGTCCGGCTTGGCTTCCAAGCCGCTAACCAACCGCTGGATGCTCTaGAGTTCGCTGGTGGCCGCCTCTTTCTCCGCGCAGAGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: LSGLASKPLTNRWML*SSLVAASFSAQSLG
Trigger: GCCCAAACTCTGCGCGGAGAAAGAGGCGGCCACCAGCGAACTGCAGAGCATCCAGCGGTTGGTTAGCGGCTTGGAAGCCAAGCCGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 90 bp AAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTGTCTaGGACGGGTCTACGGGGACGCGCTGCGGGACCTGTCCGGCTTGG +
Preference number: 5 (lower is better)
Translates to: KVHGSLNWTGMKRRV*DGSTGTRCGTCPAW
Trigger: CCAAGCCGGACAGGTCCCGCAGCGCGTCCCCGTAGACCCGTCCCAGACACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp AACCACGCCAAGAAGACAGGGGCTGTCTCTAGCACATTCTCTCGAGGGAGTCCGGGGCCATGCTCCTCTTaGCTCTCGGCCTCGGCGTCG +
Preference number: 5 (lower is better)
Translates to: NHAKKTGAVSSTFSRGSPGPCSS*LSASAS
Trigger: CGACGCCGAGGCCGAGAGCAAAGAGGAGCATGGCCC...CGGACTCCCTCGAGAGAATGTGCTAGAGACAGCCCCTGTCTTCTTGGCGTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp AGACCCAGACCAGCCTTGCTGGAAGTTGCTCTGGACATAAATGTTGGAACTCCTGAGTCGGGCGACGCTTaGTCCAGCCGCCCGCTGTCC +
Preference number: 5 (lower is better)
Translates to: RPRPALLEVALDINVGTPESGDA*SSRPLS
Trigger: GGACAGCGGGCGGCTGGACAAAGCGTCGCCCGACTC...AGGAGTTCCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACAAGAGCGGGTGCCCGTaGAAGAACTGTTGGCCCGCC +
Preference number: 5 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDKSGCP*KNCWPA
Trigger: GGCGGGCCAACAGTTCTTCAACGGGCACCCGCTCTT...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACGTGGAGGAGCGGCTGTaGAGTTCAGAGCCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDVEERL*SSEPES
Trigger: GGACTCGGGCTCTGAACTCAACAGCCGCTCCTCCAC...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACCGGGACCTGTCCGGCTaGGCTTCCAAGCCGCTAACC +
Preference number: 5 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNRDLSG*ASKPLT
Trigger: GGTTAGCGGCTTGGAAGCCAAGCCGGACAGGTCCCG...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 90 bp TCTTCCCCACCGCAGGGTACCACGCTTGTACCGAGCCCACCTCCTTaGAGTACCCCCTGGGTACGTTTCGCTCCACAGATGTTATCTTCT +
Preference number: 5 (lower is better)
Translates to: SSPPQGTTLVPSPPP*STPWVRFAPQMLSS
Trigger: AGAAGATAACATCTGTGGAGCGAAACGTACCCAGGGGGTACTCCAAGGAGGTGGGCTCGGTACAAGCGTGGTACCCTGCGGTGGGGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548503.1
CDS-3UTR CAA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACGGCCGCCCCCACCAATaGATCCATGATCGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNGRPHQ*IHDRLG
Trigger: GCCAAGCCGATCATGGATCAATTGGTGGGGGCGGCC...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp AGACCCAGACCAGCCTTGCTGGAAGTTGCTCTGGACATAAATGTTGGAACTCCTGTGGTGGTGGAGATCTaGGCCGCGTCGCAGGCCTCG +
Preference number: 5 (lower is better)
Translates to: RPRPALLEVALDINVGTPVVVEI*AASQAS
Trigger: CGAGGCCTGCGACGCGGCCAAGATCTCCACCACCAC...AGGAGTTCCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp AACCACGCCAAGAAGACAGGGGCTGTCTCTAGCACATTCTCTCGAGGGAGTCCGTTCTCCGCGCAGAGTTaGGGCGACAAGGACATGGAG +
Preference number: 5 (lower is better)
Translates to: NHAKKTGAVSSTFSRGSPFSAQS*GDKDME
Trigger: CTCCATGTCCTTGTCGCCCAAACTCTGCGCGGAGAA...CGGACTCCCTCGAGAGAATGTGCTAGAGACAGCCCCTGTCTTCTTGGCGTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS TCA 90 bp CAAGGATTTAGCAGAACAAACGGGATCTTAGGACCCCTGCCAGGCTaGAATCTTCCCCACCGCAGGGTACCACGCTTGTACCGAGCCCAC +
Preference number: 5 (lower is better)
Translates to: QGFSRTNGILGPLPG*NLPHRRVPRLYRAH
Trigger: GTGGGCTCGGTACAAGCGTGGTACCCTGCGGTGGGGAAGATTTCAGCCTGGCAGGGGTCCTAAGATCCCGTTTGTTCTGCTAAATCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548503.1
CDS-3UTR CAA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAACCGCGGGGCTGCCCTaGTCACGGCAGGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GLFYIRQSARQPELDWNETAGLP*SRQGSS
Trigger: GGAGGAGCCCTGCCGTGACAAGGGCAGCCCCGCGGT...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAACGCGCCTCTTCCACCTaGGCCGGCGCTGTGCCCTCG +
Preference number: 5 (lower is better)
Translates to: GLFYIRQSARQPELDWNERASST*AGAVPS
Trigger: CGAGGGCACAGCGCCGGCCAAGGTGGAAGAGGCGCG...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACAGTGGAGGAGCGGCTGTaGAGTTCAGAGCCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: EPPESDPDPGHINHAKKTVEERL*SSEPES
Trigger: GGACTCGGGCTCTGAACTCAACAGCCGCTCCTCCAC...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACGCCTGGGCGAAGCAGTaGAAAGCTGCTTGTTCACTG +
Preference number: 5 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDAWAKQ*KAACSL
Trigger: CAGTGAACAAGCAGCTTTCAACTGCTTCGCCCAGGC...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTACCGCGGGGCTGCCCTaGTCACGGCAGGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: KYIYKSALREMSLNTSPPTAGLP*SRQGSS
Trigger: GGAGGAGCCCTGCCGTGACAAGGGCAGCCCCGCGGT...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAGAGTCGGGCGACGCTTaGTCCAGCCGCCCGCTGTCC +
Preference number: 5 (lower is better)
Translates to: GLFYIRQSARQPELDWNEESGDA*SSRPLS
Trigger: GGACAGCGGGCGGCTGGACAAAGCGTCGCCCGACTC...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAACCCGTTGAAGAACTGTaGGCCCGCCAGGCCCGGGGC +
Preference number: 5 (lower is better)
Translates to: GLFYIRQSARQPELDWNEPVEEL*ARQARG
Trigger: GCCCCGGGCCTGGCGGGCCAACAGTTCTTCAACGGG...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACACGCATGGTGTTCAGATaGAGGAAGGGGTGGCGGTGC +
Preference number: 5 (lower is better)
Translates to: EPPESDPDPGHINHAKKTRMVFR*RKGWRC
Trigger: GCACCGCCACCCCTTCCTCAATCTGAACACCATGCG...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 90 bp TTGAGGTTCGATGTCCCTACAGTGGAGGCGGCTGGAGAAGAAGCCTaGGCGAAGCAGTTGAAAGCTGCTTGTTCACTGGAGGACTCATCA +
Preference number: 5 (lower is better)
Translates to: LRFDVPTVEAAGEEA*AKQLKAACSLEDSS
Trigger: TGATGAGTCCTCCAGTGAACAAGCAGCTTTCAACTGCTTCGCCCAGGCTTCTTCTCCAGCCGCCTCCACTGTAGGGACATCGAACCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 90 bp CAGGGTACCACGCTTGTACCGAGCCCACCTCCTTGGAGTACCCCCTaGGTACGTTTCGCTCCACAGATGTTATCTTCTGGAGAATCCAAA +
Preference number: 5 (lower is better)
Translates to: QGTTLVPSPPPWSTP*VRFAPQMLSSGESK
Trigger: TTTGGATTCTCCAGAAGATAACATCTGTGGAGCGAAACGTACCCAGGGGGTACTCCAAGGAGGTGGGCTCGGTACAAGCGTGGTACCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548503.1
CDS-3UTR CAA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAGGGCCATGCTCCTCTTaGCTCTCGGCCTCGGCGTCG +
Preference number: 5 (lower is better)
Translates to: GLFYIRQSARQPELDWNEGPCSS*LSASAS
Trigger: CGACGCCGAGGCCGAGAGCAAAGAGGAGCATGGCCC...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTCCCGTTGAAGAACTGTaGGCCCGCCAGGCCCGGGGC +
Preference number: 5 (lower is better)
Translates to: KYIYKSALREMSLNTSPPPVEEL*ARQARG
Trigger: GCCCCGGGCCTGGCGGGCCAACAGTTCTTCAACGGG...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACGAATGTACATCCTCTTaGGCATTTCGGGGTCGGCCT +
Preference number: 5 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNECTSS*AFRGRP
Trigger: AGGCCGACCCCGAAATGCCAAAGAGGATGTACATTC...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCTGGAAAGTGACGACTTaGGACATCCACTGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLIWKVTT*DIHCSP
Trigger: TGGGGAACAGTGGATGTCCAAAGTCGTCACTTTCCA...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCGCAGTTGAAAGCTGCTaGTTCACTGGAGGACTCATC +
Preference number: 5 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLIAVESC*FTGGLI
Trigger: GATGAGTCCTCCAGTGAACAAGCAGCTTTCAACTGC...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTAAGAGCGGGTGCCCGTaGAAGAACTGTTGGCCCGCC +
Preference number: 5 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRKSGCP*KNCWPA
Trigger: GGCGGGCCAACAGTTCTTCAACGGGCACCCGCTCTT...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp AGACCCAGACCAGCCTTGCTGGAAGTTGCTCTGGACATAAATGTTGGAACTCCTTTCTCCGCGCAGAGTTaGGGCGACAAGGACATGGAG +
Preference number: 5 (lower is better)
Translates to: RPRPALLEVALDINVGTPFSAQS*GDKDME
Trigger: CTCCATGTCCTTGTCGCCCAAACTCTGCGCGGAGAA...AGGAGTTCCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp AGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCAGATCCCGGACGTTTCAATCCAAATCTaGCTGGGCTCTTCTCCCGTG +
Preference number: 5 (lower is better)
Translates to: SSMQPTFLSPQNLIQIPDVSIQI*LGSSPV
Trigger: CACGGGAGAAGAGCCCAGCAAGATTTGGATTGAAAC...GTCCGGGATCTGGATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349155.7
CDS-3UTR CAA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTCGCATGGTGTTCAGATaGAGGAAGGGGTGGCGGTGC +
Preference number: 5 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRRMVFR*RKGWRC
Trigger: GCACCGCCACCCCTTCCTCAATCTGAACACCATGCG...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTCGGGACCTGTCCGGCTaGGCTTCCAAGCCGCTAACC +
Preference number: 5 (lower is better)
Translates to: KYIYKSALREMSLNTSPPRDLSG*ASKPLT
Trigger: GGTTAGCGGCTTGGAAGCCAAGCCGGACAGGTCCCG...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS GCA 90 bp AGGGTGTCTCGGTTTCAATCCAAATCTTGCTGGGCTCTTCTCCCGTaGCTCTCTCTCTTCCTTGTCCTAAAACGTGAGCGAATTCGCTTC +
Preference number: 5 (lower is better)
Translates to: RVSRFQSKSCWALLP*LSLFLVLKRERIRF
Trigger: GAAGCGAATTCGCTCACGTTTTAGGACAAGGAAGAGAGAGAGGCACGGGAGAAGAGCCCAGCAAGATTTGGATTGAAACCGAGACACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349155.7
CDS-3UTR CAA 90 bp AGACCCAGACCAGCCTTGCTGGAAGTTGCTCTGGACATAAATGTTGGAACTCCTATTCGCCTTCCCGACTaGGTAATGACCATCTCGGTG +
Preference number: 5 (lower is better)
Translates to: RPRPALLEVALDINVGTPIRLPD*VMTISV
Trigger: CACCGAGATGGTCATTACCAAGTCGGGAAGGCGAAT...AGGAGTTCCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACATGGAAAGTGACGACTTaGGACATCCACTGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: EPPESDPDPGHINHAKKTWKVTT*DIHCSP
Trigger: TGGGGAACAGTGGATGTCCAAAGTCGTCACTTTCCA...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTAGACCCAGACCAGCCTaGCTGGAAGTTGCTCTGGAC +
Preference number: 5 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRRPRPA*LEVALD
Trigger: GTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACACCTTGGGTCACTGATTaGAGGGCAAAGGATTGGGAA +
Preference number: 5 (lower is better)
Translates to: EPPESDPDPGHINHAKKTPWVTD*RAKDWE
Trigger: TTCCCAATCCTTTGCCCTCAAATCAGTGACCCAAGG...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTGCCTGGGCGAAGCAGTaGAAAGCTGCTTGTTCACTG +
Preference number: 5 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRAWAKQ*KAACSL
Trigger: CAGTGAACAAGCAGCTTTCAACTGCTTCGCCCAGGC...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAGACCCAGACCAGCCTaGCTGGAAGTTGCTCTGGAC +
Preference number: 5 (lower is better)
Translates to: GLFYIRQSARQPELDWNERPRPA*LEVALD
Trigger: GTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACGAAAGGGTATTGGTGTaGGTGCAGGAAGTGTGTTTT +
Preference number: 5 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNERVLV*VQEVCF
Trigger: AAAACACACTTCCTGCACCAACACCAATACCCTTTC...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACCAGCGCTATCAAAACTaGAATTGCAAACTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNQRYQN*NCKLAS
Trigger: GGAAGCCAGTTTGCAATTCAAGTTTTGATAGCGCTG...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349155.7
CDS-3UTR CAA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTGAATGTACATCCTCTTaGGCATTTCGGGGTCGGCCT +
Preference number: 5 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRECTSS*AFRGRP
Trigger: AGGCCGACCCCGAAATGCCAAAGAGGATGTACATTC...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACGTCCCATTCTCCTTTTaGTGTCTTTCATCAAACACC +
Preference number: 5 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNVPFSF*CLSSNT
Trigger: GGTGTTTGATGAAAGACACAAAAAGGAGAATGGGAC...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp AACCACGCCAAGAAGACAGGGGCTGTCTCTAGCACATTCTCTCGAGGGAGTCCGCTGCTCAGTAATTTATaGAGAACCGATAATGCAAGT +
Preference number: 5 (lower is better)
Translates to: NHAKKTGAVSSTFSRGSPLLSNL*RTDNAS
Trigger: ACTTGCATTATCGGTTCTCAATAAATTACTGAGCAG...CGGACTCCCTCGAGAGAATGTGCTAGAGACAGCCCCTGTCTTCTTGGCGTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCAAATTCCACTTCGTTTaGAGGAAATCAGAGACTAGC +
Preference number: 5 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLIKFHFV*RKSETS
Trigger: GCTAGTCTCTGATTTCCTCAAAACGAAGTGGAATTT...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp CATGGCGGGCCCGTGGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACCTATCAAAACTTGAATaGCAAACTGGCTTCCGTTCG +
Preference number: 5 (lower is better)
Translates to: HGGPVVYFISDKVHGSLNLSKLE*QTGFRS
Trigger: CGAACGGAAGCCAGTTTGCAATTCAAGTTTTGATAG...GTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACCACGGGCCCGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349155.7
CDS-3UTR CAA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACAGTCCCATTCTCCTTTTaGTGTCTTTCATCAAACACC +
Preference number: 5 (lower is better)
Translates to: EPPESDPDPGHINHAKKTVPFSF*CLSSNT
Trigger: GGTGTTTGATGAAAGACACAAAAAGGAGAATGGGAC...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp AGACCCAGACCAGCCTTGCTGGAAGTTGCTCTGGACATAAATGTTGGAACTCCTCTGGGACATAAATCTTaGAGGTTCGATGTCCCTACA +
Preference number: 5 (lower is better)
Translates to: RPRPALLEVALDINVGTPLGHKS*RFDVPT
Trigger: TGTAGGGACATCGAACCTCAAAGATTTATGTCCCAG...AGGAGTTCCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp CCTACCCCCAGTAGCTCAATGCAACCGACGTTTCTGAGCCCCCAGAATCTGATCCTGCTCAGTAATTTATaGAGAACCGATAATGCAAGT +
Preference number: 5 (lower is better)
Translates to: PTPSSSMQPTFLSPQNLILLSNL*RTDNAS
Trigger: ACTTGCATTATCGGTTCTCAATAAATTACTGAGCAG...GATCAGATTCTGGGGGCTCAGAAACGTCGGTTGCATTGAGCTACTGGGGGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS TCA 90 bp TATGCCTTAATCAAATCAAGGGCTTCAAATGCAATTCCTGCCCGCTaGAGATATTTCCGCGCCATTCGCGTCTTCCTGGGCCTAATCTTT +
Preference number: 5 (lower is better)
Translates to: YALIKSRASNAIPAR*RYFRAIRVFLGLIF
Trigger: AAAGATTAGGCCCAGGAAGACGCGAATGGCGCGGAAATATCTTCAGCGGGCAGGAATTGCATTTGAAGCCCTTGATTTGATTAAGGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552054.1
CDS GCA 90 bp GAATATTTATGCCTTAATCAAATCAAGGGCTTCAAATGCAATTCCTaGCCGCTGAAGATATTTCCGCGCCATTCGCGTCTTCCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: EYLCLNQIKGFKCNS*PLKIFPRHSRLPGP
Trigger: AGGCCCAGGAAGACGCGAATGGCGCGGAAATATCTTCAGCGGGCAGGAATTGCATTTGAAGCCCTTGATTTGATTAAGGCATAAATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552054.1
CDS-3UTR CAA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTATTCGCCTTCCCGACTaGGTAATGACCATCTCGGTG +
Preference number: 5 (lower is better)
Translates to: KYIYKSALREMSLNTSPPIRLPD*VMTISV
Trigger: CACCGAGATGGTCATTACCAAGTCGGGAAGGCGAAT...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAGCAGTTGAAAGCTGCTaGTTCACTGGAGGACTCATC +
Preference number: 5 (lower is better)
Translates to: GLFYIRQSARQPELDWNEAVESC*FTGGLI
Trigger: GATGAGTCCTCCAGTGAACAAGCAGCTTTCAACTGC...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp GAGCCCCCAGAATCTGATCCAGATCCCGGACATATAAACCACGCCAAGAAGACATGTTTGTCTGAAATGTaGTTGGTGAGTTTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: EPPESDPDPGHINHAKKTCLSEM*LVSFSL
Trigger: CAAACTGAAACTCACCAACAACATTTCAGACAAACA...TGTCTTCTTGGCGTGGTTTATATGTCCGGGATCTGGATCAGATTCTGGGGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTCCTTGGGTCACTGATTaGAGGGCAAAGGATTGGGAA +
Preference number: 5 (lower is better)
Translates to: KYIYKSALREMSLNTSPPPWVTD*RAKDWE
Trigger: TTCCCAATCCTTTGCCCTCAAATCAGTGACCCAAGG...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS TCA 90 bp CGCCCACTAATTGACGAGCCCAATCCACTTAAAGCCCTGAAAGGCTaGACTCTAGAGAGGAATATTTATGCCTTAATCAAATCAAGGGCT +
Preference number: 5 (lower is better)
Translates to: RPLIDEPNPLKALKG*TLERNIYALIKSRA
Trigger: AGCCCTTGATTTGATTAAGGCATAAATATTCCTCTCTAGAGTTCAGCCTTTCAGGGCTTTAAGTGGATTGGGCTCGTCAATTAGTGGGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552054.1
CDS GCA 90 bp CCAAAGAGCTGGAATTGCTATAGAACACAAGCCGGTAAGTTTTCTTaGCCCATTTCTTTTAGAACGCCAGGCCTTCCATTATTTGGAGAG +
Preference number: 5 (lower is better)
Translates to: PKSWNCYRTQAGKFS*PISFRTPGLPLFGE
Trigger: CTCTCCAAATAATGGAAGGCCTGGCGTTCTAAAAGAAATGGGGCAAGAAAACTTACCGGCTTGTGTTCTATAGCAATTCCAGCTCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552054.1
CDS-3UTR CAA 90 bp AGACCCAGACCAGCCTTGCTGGAAGTTGCTCTGGACATAAATGTTGGAACTCCTTGTTTGTCTGAAATGTaGTTGGTGAGTTTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: RPRPALLEVALDINVGTPCLSEM*LVSFSL
Trigger: CAAACTGAAACTCACCAACAACATTTCAGACAAACA...AGGAGTTCCAACATTTATGTCCAGAGCAACTTCCAGCAAGGCTGGTCTGGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp GGTTTATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAGAAAGGGTATTGGTGTaGGTGCAGGAAGTGTGTTTT +
Preference number: 5 (lower is better)
Translates to: GLFYIRQSARQPELDWNEERVLV*VQEVCF
Trigger: AAAACACACTTCCTGCACCAACACCAATACCCTTTC...TTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS GCA 90 bp TCTAGAGAGGAATATTTATGCCTTAATCAAATCAAGGGCTTCAAATaGAATTCCTGCCCGCTGAAGATATTTCCGCGCCATTCGCGTCTT +
Preference number: 5 (lower is better)
Translates to: SREEYLCLNQIKGFK*NSCPLKIFPRHSRL
Trigger: AAGACGCGAATGGCGCGGAAATATCTTCAGCGGGCAGGAATTGCATTTGAAGCCCTTGATTTGATTAAGGCATAAATATTCCTCTCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552054.1
CDS-3UTR CAA 90 bp AAATATATATATAAATCCGCACTGAGGGAGATGTCTTTGAACACCTCCCCGCCTCTGGGACATAAATCTTaGAGGTTCGATGTCCCTACA +
Preference number: 5 (lower is better)
Translates to: KYIYKSALREMSLNTSPPLGHKS*RFDVPT
Trigger: TGTAGGGACATCGAACCTCAAAGATTTATGTCCCAG...AGGCGGGGAGGTGTTCAAAGACATCTCCCTCAGTGCGGATTTATATATATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS-3UTR CAA 90 bp TTTATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTGGAATGAAAAGACGTAAATTCCACTTCGTTTaGAGGAAATCAGAGACTAGC +
Preference number: 5 (lower is better)
Translates to: FISDKVHGSLNWTGMKRRKFHFV*RKSETS
Trigger: GCTAGTCTCTGATTTCCTCAAAACGAAGTGGAATTT...ACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CAA 90 bp GAGTCCACTGCCACCGAGGCCGGGCTGGCGGCCAGGGCGGCGACTTaGCCGTCCAGGGGCCCCGCGGCCGCCGCCATGGAGGGCAGGGCG +
Preference number: 6 (lower is better)
Translates to: ESTATEAGLAARAAT*PSRGPAAAAMEGRA
Trigger: CGCCCTGCCCTCCATGGCGGCGGCCGCGGGGCCCCTGGACGGCAAAGTCGCCGCCCTGGCCGCCAGCCCGGCCTCGGTGGCAGTGGACTC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 72 bp CCAGGGCGCCCGGCAGCGAGAGCGCCGCCGCGCCGTTaGGAGGCAGCGTCAGCGCGGGGAAGAACGGCGGCT +
Preference number: 6 (lower is better)
Translates to: PGRPAARAPPRR*EAASARGRTAA
Trigger: AGCCGCCGTTCTTCCCCGCGCTGACGCTGCCTCCCAACGGCGCGGCGGCGCTCTCGCTGCCGGGCGCCCTGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257566.7
ENST00000349155.7
ENST00000552054.1
CDS CAA 90 bp GCGGCGGCCGCGTCCGTCTGCACCGTGAGCGGCGCGAAGGCCTCCTaGCCCGGGAGCGCGCGCGCCTCTTCCACCTTGGCCGGCGCTGTG +
Preference number: 6 (lower is better)
Translates to: AAAASVCTVSGAKAS*PGSARASSTLAGAV
Trigger: CACAGCGCCGGCCAAGGTGGAAGAGGCGCGCGCGCTCCCGGGCAAGGAGGCCTTCGCGCCGCTCACGGTGCAGACGGACGCGGCCGCCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS GCA 72 bp CCTTGGCCGGCGCTGTGCCCTCGCGAACCGGGCTCCTaGGCTCCTCCGCGCCCAGGCCGCGAGTGCTGGACG +
Preference number: 6 (lower is better)
Translates to: PWPALCPREPGS*APPRPGRECWT
Trigger: CGTCCAGCACTCGCGGCCTGGGCGCGGAGGAGCGCAGGAGCCCGGTTCGCGAGGGCACAGCGCCGGCCAAGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS GCA 72 bp GGAGCGCGCGCGCCTCTTCCACCTTGGCCGGCGCTGTaGCCTCGCGAACCGGGCTCCTGCGCTCCTCCGCGC +
Preference number: 6 (lower is better)
Translates to: GARAPLPPWPAL*PREPGSCAPPR
Trigger: GCGCGGAGGAGCGCAGGAGCCCGGTTCGCGAGGGCACAGCGCCGGCCAAGGTGGAAGAGGCGCGCGCGCTCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 72 bp CCTCCTTGCCCGGGAGCGCGCGCGCCTCTTCCACCTTaGCCGGCGCTGTGCCCTCGCGAACCGGGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: PPCPGARAPLPP*PALCPREPGSC
Trigger: GCAGGAGCCCGGTTCGCGAGGGCACAGCGCCGGCCAAGGTGGAAGAGGCGCGCGCGCTCCCGGGCAAGGAGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CAA 72 bp GCGTCCGTCTGCACCGTGAGCGGCGCGAAGGCCTCCTaGCCCGGGAGCGCGCGCGCCTCTTCCACCTTGGCC +
Preference number: 6 (lower is better)
Translates to: ASVCTVSGAKAS*PGSARASSTLA
Trigger: GGCCAAGGTGGAAGAGGCGCGCGCGCTCCCGGGCAAGGAGGCCTTCGCGCCGCTCACGGTGCAGACGGACGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS TCA 72 bp GGAGGCAGCGTCAGCGCGGGGAAGAACGGCGGCTGGTaGCCCAGCACCGCGCTCATGGCGAAGTCCGGCGCC +
Preference number: 6 (lower is better)
Translates to: GGSVSAGKNGGW*PSTALMAKSGA
Trigger: GGCGCCGGACTTCGCCATGAGCGCGGTGCTGGGTCACCAGCCGCCGTTCTTCCCCGCGCTGACGCTGCCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257566.7
ENST00000349155.7
ENST00000552054.1
CDS GCA 72 bp CCGGGCTCCTGCGCTCCTCCGCGCCCAGGCCGCGAGTaGTGGACGAGATGGTGGCGGGGCTATGGCGTGAGT +
Preference number: 6 (lower is better)
Translates to: PGSCAPPRPGRE*WTRWWRGYGVS
Trigger: ACTCACGCCATAGCCCCGCCACCATCTCGTCCAGCACTCGCGGCCTGGGCGCGGAGGAGCGCAGGAGCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 72 bp GGCTCCTGCGCTCCTCCGCGCCCAGGCCGCGAGTGCTaGACGAGATGGTGGCGGGGCTATGGCGTGAGTCGG +
Preference number: 6 (lower is better)
Translates to: GSCAPPRPGREC*TRWWRGYGVSR
Trigger: CCGACTCACGCCATAGCCCCGCCACCATCTCGTCCAGCACTCGCGGCCTGGGCGCGGAGGAGCGCAGGAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 72 bp GGCTGCCCTTGTCACGGCAGGGCTCCTCCGACGTGGTaGTGGAGATCTTGGCCGCGTCGCAGGCCTCGGGGC +
Preference number: 6 (lower is better)
Translates to: GCPCHGRAPPTW*WRSWPRRRPRG
Trigger: GCCCCGAGGCCTGCGACGCGGCCAAGATCTCCACCACCACGTCGGAGGAGCCCTGCCGTGACAAGGGCAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 72 bp CGGGGCTGCCCTTGTCACGGCAGGGCTCCTCCGACGTaGTGGTGGAGATCTTGGCCGCGTCGCAGGCCTCGG +
Preference number: 6 (lower is better)
Translates to: RGCPCHGRAPPT*WWRSWPRRRPR
Trigger: CCGAGGCCTGCGACGCGGCCAAGATCTCCACCACCACGTCGGAGGAGCCCTGCCGTGACAAGGGCAGCCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 72 bp GCTCCTCCGCGCCCAGGCCGCGAGTGCTGGACGAGATaGTGGCGGGGCTATGGCGTGAGTCGGGCGACGCTT +
Preference number: 6 (lower is better)
Translates to: APPRPGRECWTR*WRGYGVSRATL
Trigger: AAGCGTCGCCCGACTCACGCCATAGCCCCGCCACCATCTCGTCCAGCACTCGCGGCCTGGGCGCGGAGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 72 bp ACAGTCCCTGCGCCGCAGCGGCAGAGGCCATGGCCGTaGAATCCAGGCCCGAGACACCGGTGGAGGCCCCAG +
Preference number: 6 (lower is better)
Translates to: TVPAPQRQRPWP*NPGPRHRWRPQ
Trigger: CTGGGGCCTCCACCGGTGTCTCGGGCCTGGATTCCACGGCCATGGCCTCTGCCGCTGCGGCGCAGGGACTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CAA 72 bp ATGGTGGCGGGGCTATGGCGTGAGTCGGGCGACGCTTaGTCCAGCCGCCCGCTGTCCCGGGGCCGCTCAGCA +
Preference number: 6 (lower is better)
Translates to: MVAGLWRESGDA*SSRPLSRGRSA
Trigger: TGCTGAGCGGCCCCGGGACAGCGGGCGGCTGGACAAAGCGTCGCCCGACTCACGCCATAGCCCCGCCACCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CAA 90 bp CCCCAGGGAGGAGAACGGGATGCCGGTCTCGGCCGCCCCCACCAATaGATCCATGATCGGCTTGGCCAGGGCGCCCGGCAGCGAGAGCGC +
Preference number: 6 (lower is better)
Translates to: PQGGERDAGLGRPHQ*IHDRLGQGARQRER
Trigger: GCGCTCTCGCTGCCGGGCGCCCTGGCCAAGCCGATCATGGATCAATTGGTGGGGGCGGCCGAGACCGGCATCCCGTTCTCCTCCCTGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257566.7
ENST00000349155.7
ENST00000552054.1
CDS TCA 72 bp GGATGCCGGTCTCGGCCGCCCCCACCAATTGATCCATaGTCGGCTTGGCCAGGGCGCCCGGCAGCGAGAGCG +
Preference number: 6 (lower is better)
Translates to: GCRSRPPPPIDP*SAWPGRPAARA
Trigger: CGCTCTCGCTGCCGGGCGCCCTGGCCAAGCCGATCATGGATCAATTGGTGGGGGCGGCCGAGACCGGCATCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257566.7
ENST00000349155.7
ENST00000552054.1
CDS GCA 72 bp ATTGAGGAAGGGGTGGCGGTGCACCGAGCTGGAGGCTaGCGCAGAGGAGGCGGCCGCCGCTGCGGCCATGTA +
Preference number: 6 (lower is better)
Translates to: IEEGVAVHRAGG*RRGGGRRCGHV
Trigger: TACATGGCCGCAGCGGCGGCCGCCTCCTCTGCGGCAGCCTCCAGCTCGGTGCACCGCCACCCCTTCCTCAAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 72 bp AGGCCGCGAGTGCTGGACGAGATGGTGGCGGGGCTATaGCGTGAGTCGGGCGACGCTTTGTCCAGCCGCCCG +
Preference number: 6 (lower is better)
Translates to: RPRVLDEMVAGL*RESGDALSSRP
Trigger: CGGGCGGCTGGACAAAGCGTCGCCCGACTCACGCCATAGCCCCGCCACCATCTCGTCCAGCACTCGCGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 72 bp CCTCCGCGCCCAGGCCGCGAGTGCTGGACGAGATGGTaGCGGGGCTATGGCGTGAGTCGGGCGACGCTTTGT +
Preference number: 6 (lower is better)
Translates to: PPRPGRECWTRW*RGYGVSRATLC
Trigger: ACAAAGCGTCGCCCGACTCACGCCATAGCCCCGCCACCATCTCGTCCAGCACTCGCGGCCTGGGCGCGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS TCA 72 bp GCGAGTGCTGGACGAGATGGTGGCGGGGCTATGGCGTaGGTCGGGCGACGCTTTGTCCAGCCGCCCGCTGTC +
Preference number: 6 (lower is better)
Translates to: ASAGRDGGGAMA*VGRRFVQPPAV
Trigger: GACAGCGGGCGGCTGGACAAAGCGTCGCCCGACTCACGCCATAGCCCCGCCACCATCTCGTCCAGCACTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 72 bp TGCCCTTGTCACGGCAGGGCTCCTCCGACGTGGTGGTaGAGATCTTGGCCGCGTCGCAGGCCTCGGGGCCAT +
Preference number: 6 (lower is better)
Translates to: CPCHGRAPPTWW*RSWPRRRPRGH
Trigger: ATGGCCCCGAGGCCTGCGACGCGGCCAAGATCTCCACCACCACGTCGGAGGAGCCCTGCCGTGACAAGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 72 bp AGGCCATGGCCGTGGAATCCAGGCCCGAGACACCGGTaGAGGCCCCAGAAACCGTGGCCAGGAGGGGACCCA +
Preference number: 6 (lower is better)
Translates to: RPWPWNPGPRHR*RPQKPWPGGDP
Trigger: TGGGTCCCCTCCTGGCCACGGTTTCTGGGGCCTCCACCGGTGTCTCGGGCCTGGATTCCACGGCCATGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CAA 72 bp GGAGAACGGGATGCCGGTCTCGGCCGCCCCCACCAATaGATCCATGATCGGCTTGGCCAGGGCGCCCGGCAG +
Preference number: 6 (lower is better)
Translates to: GERDAGLGRPHQ*IHDRLGQGARQ
Trigger: CTGCCGGGCGCCCTGGCCAAGCCGATCATGGATCAATTGGTGGGGGCGGCCGAGACCGGCATCCCGTTCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257566.7
ENST00000349155.7
ENST00000552054.1
CDS CAA 90 bp GGCGACAAGGACATGGAGCTGGAGGAGAGCGTGGAGGAGCGGCTGTaGAGTTCAGAGCCCGAGTCCACTGCCACCGAGGCCGGGCTGGCG +
Preference number: 6 (lower is better)
Translates to: GDKDMELEESVEERL*SSEPESTATEAGLA
Trigger: CGCCAGCCCGGCCTCGGTGGCAGTGGACTCGGGCTCTGAACTCAACAGCCGCTCCTCCACGCTCTCCTCCAGCTCCATGTCCTTGTCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS TCA 72 bp GGCTGTAGCGCAGCCGCGGGCGCATGGTGTTCAGATTaGGGAAGGGGTGGCGGTGCACCGAGCTGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: GCSAAAGAWCSD*GRGGGAPSWRL
Trigger: CAGCCTCCAGCTCGGTGCACCGCCACCCCTTCCTCAATCTGAACACCATGCGCCCGCGGCTGCGCTACAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS TCA 72 bp CGAGCAGGGTCTCGACTCGCGCCCGAGCCCTGCCGCTaGGCTCGAAATAGACACTCCAGCCCTGCGTCCCAG +
Preference number: 6 (lower is better)
Translates to: RAGSRLAPEPCR*ARNRHSSPASQ
Trigger: CTGGGACGCAGGGCTGGAGTGTCTATTTCGAGCTCAGCGGCAGGGCTCGGGCGCGAGTCGAGACCCTGCTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349155.7
CDS GCA 72 bp GTGGAGATCTTGGCCGCGTCGCAGGCCTCGGGGCCATaGTCCTCTTTGCTCTCGGCCTCGGCGTCGCTCTCA +
Preference number: 6 (lower is better)
Translates to: VEILAASQASGP*SSLLSASASLS
Trigger: TGAGAGCGACGCCGAGGCCGAGAGCAAAGAGGAGCATGGCCCCGAGGCCTGCGACGCGGCCAAGATCTCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 72 bp TCTCATGGAGAGGCTCATCCACTCCAGGCGGGGCGCTaGGCTCCAGCCGGGGACAAGTCCGCAGCTGCTGTG +
Preference number: 6 (lower is better)
Translates to: SHGEAHPLQAGR*APAGDKSAAAV
Trigger: CACAGCAGCTGCGGACTTGTCCCCGGCTGGAGCCCAGCGCCCCGCCTGGAGTGGATGAGCCTCTCCATGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257566.7
ENST00000349155.7
ENST00000552054.1
CDS CCA 72 bp GGAAGAACGGCGGCTGGTGACCCAGCACCGCGCTCATaGCGAAGTCCGGCGCCCGGTGAGGTAGGAACGGAT +
Preference number: 6 (lower is better)
Translates to: GRTAAGDPAPRS*RSPAPGEVGTD
Trigger: ATCCGTTCCTACCTCACCGGGCGCCGGACTTCGCCATGAGCGCGGTGCTGGGTCACCAGCCGCCGTTCTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257566.7
ENST00000349155.7
ENST00000552054.1
CDS CAA 72 bp CGGGTCTACGGGGACGCGCTGCGGGACCTGTCCGGCTaGGCTTCCAAGCCGCTAACCAACCGCTGGATGCTC +
Preference number: 6 (lower is better)
Translates to: RVYGDALRDLSG*ASKPLTNRWML
Trigger: GAGCATCCAGCGGTTGGTTAGCGGCTTGGAAGCCAAGCCGGACAGGTCCCGCAGCGCGTCCCCGTAGACCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 72 bp GTTCGCTGGTGGCCGCCTCTTTCTCCGCGCAGAGTTTaGGCGACAAGGACATGGAGCTGGAGGAGAGCGTGG +
Preference number: 6 (lower is better)
Translates to: VRWWPPLSPRRV*ATRTWSWRRAW
Trigger: CCACGCTCTCCTCCAGCTCCATGTCCTTGTCGCCCAAACTCTGCGCGGAGAAAGAGGCGGCCACCAGCGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CAA 90 bp ATGCTCTGCAGTTCGCTGGTGGCCGCCTCTTTCTCCGCGCAGAGTTaGGGCGACAAGGACATGGAGCTGGAGGAGAGCGTGGAGGAGCGG +
Preference number: 6 (lower is better)
Translates to: MLCSSLVAASFSAQS*GDKDMELEESVEER
Trigger: CCGCTCCTCCACGCTCTCCTCCAGCTCCATGTCCTTGTCGCCCAAACTCTGCGCGGAGAAAGAGGCGGCCACCAGCGAACTGCAGAGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS GCA 72 bp TTGGCTTCCAAGCCGCTAACCAACCGCTGGATGCTCTaGAGTTCGCTGGTGGCCGCCTCTTTCTCCGCGCAG +
Preference number: 6 (lower is better)
Translates to: LASKPLTNRWML*SSLVAASFSAQ
Trigger: CTGCGCGGAGAAAGAGGCGGCCACCAGCGAACTGCAGAGCATCCAGCGGTTGGTTAGCGGCTTGGAAGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 72 bp GGCAGCCTGAACTGGACTGGAATGAAAAGACGTGTCTaGGACGGGTCTACGGGGACGCGCTGCGGGACCTGT +
Preference number: 6 (lower is better)
Translates to: GSLNWTGMKRRV*DGSTGTRCGTC
Trigger: ACAGGTCCCGCAGCGCGTCCCCGTAGACCCGTCCCAGACACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 72 bp CCGCAGGGTACCACGCTTGTACCGAGCCCACCTCCTTaGAGTACCCCCTGGGTACGTTTCGCTCCACAGATG +
Preference number: 6 (lower is better)
Translates to: PQGTTLVPSPPP*STPWVRFAPQM
Trigger: CATCTGTGGAGCGAAACGTACCCAGGGGGTACTCCAAGGAGGTGGGCTCGGTACAAGCGTGGTACCCTGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548503.1
CDS CAA 72 bp ACCGCAGGGTACCACGCTTGTACCGAGCCCACCTCCTaGGAGTACCCCCTGGGTACGTTTCGCTCCACAGAT +
Preference number: 6 (lower is better)
Translates to: TAGYHACTEPTS*EYPLGTFRSTD
Trigger: ATCTGTGGAGCGAAACGTACCCAGGGGGTACTCCAAGGAGGTGGGCTCGGTACAAGCGTGGTACCCTGCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548503.1
CDS CAA 90 bp ATCTTCCCCACCGCAGGGTACCACGCTTGTACCGAGCCCACCTCCTaGGAGTACCCCCTGGGTACGTTTCGCTCCACAGATGTTATCTTC +
Preference number: 6 (lower is better)
Translates to: IFPTAGYHACTEPTS*EYPLGTFRSTDVIF
Trigger: GAAGATAACATCTGTGGAGCGAAACGTACCCAGGGGGTACTCCAAGGAGGTGGGCTCGGTACAAGCGTGGTACCCTGCGGTGGGGAAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548503.1
CDS GCA 72 bp TCTGTCTTCCTCTCCCTCTTTCTCGCTGGTGGCGTCTaGAGCTGTGCTAGACCCGGCTTTAACAGGGAGCGA +
Preference number: 6 (lower is better)
Translates to: SVFLSLFLAGGV*SCARPGFNRER
Trigger: TCGCTCCCTGTTAAAGCCGGGTCTAGCACAGCTGCAGACGCCACCAGCGAGAAAGAGGGAGAGGAAGACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349155.7
CDS TCA 72 bp AGCAGAACAAACGGGATCTTAGGACCCCTGCCAGGCTaGAATCTTCCCCACCGCAGGGTACCACGCTTGTAC +
Preference number: 6 (lower is better)
Translates to: SRTNGILGPLPG*NLPHRRVPRLY
Trigger: GTACAAGCGTGGTACCCTGCGGTGGGGAAGATTTCAGCCTGGCAGGGGTCCTAAGATCCCGTTTGTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548503.1
CDS CCA 72 bp GATGTCCCTACAGTGGAGGCGGCTGGAGAAGAAGCCTaGGCGAAGCAGTTGAAAGCTGCTTGTTCACTGGAG +
Preference number: 6 (lower is better)
Translates to: DVPTVEAAGEEA*AKQLKAACSLE
Trigger: CTCCAGTGAACAAGCAGCTTTCAACTGCTTCGCCCAGGCTTCTTCTCCAGCCGCCTCCACTGTAGGGACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS TCA 72 bp CCGTCCTTGTGCCTTGCGTTTTTAAAAAGCCGCTCCTaGACGTCGGTTTCAGAAGCGAGAGGAGCGAGCAGG +
Preference number: 6 (lower is better)
Translates to: PSLCLAFLKSRS*TSVSEARGASR
Trigger: CCTGCTCGCTCCTCTCGCTTCTGAAACCGACGTTCAGGAGCGGCTTTTTAAAAACGCAAGGCACAAGGACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 72 bp ATCTTTGAGGTTCGATGTCCCTACAGTGGAGGCGGCTaGAGAAGAAGCCTGGGCGAAGCAGTTGAAAGCTGC +
Preference number: 6 (lower is better)
Translates to: IFEVRCPYSGGG*RRSLGEAVESC
Trigger: GCAGCTTTCAACTGCTTCGCCCAGGCTTCTTCTCCAGCCGCCTCCACTGTAGGGACATCGAACCTCAAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 72 bp ACGCTTGTACCGAGCCCACCTCCTTGGAGTACCCCCTaGGTACGTTTCGCTCCACAGATGTTATCTTCTGGA +
Preference number: 6 (lower is better)
Translates to: TLVPSPPPWSTP*VRFAPQMLSSG
Trigger: TCCAGAAGATAACATCTGTGGAGCGAAACGTACCCAGGGGGTACTCCAAGGAGGTGGGCTCGGTACAAGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548503.1
CDS CAA 90 bp GGAGGCGGCTGGAGAAGAAGCCTGGGCGAAGCAGTTGAAAGCTGCTaGTTCACTGGAGGACTCATCAGAGGTCCCATTCTCCTTTTTGTG +
Preference number: 6 (lower is better)
Translates to: GGGWRRSLGEAVESC*FTGGLIRGPILLFV
Trigger: CACAAAAAGGAGAATGGGACCTCTGATGAGTCCTCCAGTGAACAAGCAGCTTTCAACTGCTTCGCCCAGGCTTCTTCTCCAGCCGCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS GCA 72 bp GCAAACATAGTCGCGCGGGTGACCGTCCTTGTGCCTTaGGTTTTTAAAAAGCCGCTCCTGAACGTCGGTTTC +
Preference number: 6 (lower is better)
Translates to: ANIVARVTVLVP*VFKKPLLNVGF
Trigger: GAAACCGACGTTCAGGAGCGGCTTTTTAAAAACGCAAGGCACAAGGACGGTCACCCGCGCGACTATGTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS GCA 72 bp GGCTGGAGAAGAAGCCTGGGCGAAGCAGTTGAAAGCTaGTTGTTCACTGGAGGACTCATCAGAGGTCCCATT +
Preference number: 6 (lower is better)
Translates to: GWRRSLGEAVES*LFTGGLIRGPI
Trigger: AATGGGACCTCTGATGAGTCCTCCAGTGAACAAGCAGCTTTCAACTGCTTCGCCCAGGCTTCTTCTCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CCA 72 bp TATATCCGACAAAGTGCACGGCAGCCTGAACTGGACTaGAATGAAAAGACGTGTCTGGGACGGGTCTACGGG +
Preference number: 6 (lower is better)
Translates to: YIRQSARQPELD*NEKTCLGRVYG
Trigger: CCCGTAGACCCGTCCCAGACACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS TCA 72 bp TCTCCCGTGCCTCTCTCTCTTCCTTGTCCTAAAACGTaGGCGAATTCGCTTCCTAAATCTGTGTCCAGGCGC +
Preference number: 6 (lower is better)
Translates to: SPVPLSLPCPKT*ANSLPKSVSRR
Trigger: GCGCCTGGACACAGATTTAGGAAGCGAATTCGCTCACGTTTTAGGACAAGGAAGAGAGAGAGGCACGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349155.7
CDS CAA 72 bp TGGAGAAGAAGCCTGGGCGAAGCAGTTGAAAGCTGCTaGTTCACTGGAGGACTCATCAGAGGTCCCATTCTC +
Preference number: 6 (lower is better)
Translates to: WRRSLGEAVESC*FTGGLIRGPIL
Trigger: GAGAATGGGACCTCTGATGAGTCCTCCAGTGAACAAGCAGCTTTCAACTGCTTCGCCCAGGCTTCTTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS TCA 72 bp ATCAAATCAAGGGCTTCAAATGCAATTCCTGCCCGCTaGAGATATTTCCGCGCCATTCGCGTCTTCCTGGGC +
Preference number: 6 (lower is better)
Translates to: IKSRASNAIPAR*RYFRAIRVFLG
Trigger: GCCCAGGAAGACGCGAATGGCGCGGAAATATCTTCAGCGGGCAGGAATTGCATTTGAAGCCCTTGATTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552054.1
CDS CCA 72 bp CCCCTGGGTACGTTTCGCTCCACAGATGTTATCTTCTaGAGAATCCAAATTGCTCCTCAGTTGCCAAAGGGC +
Preference number: 6 (lower is better)
Translates to: PLGTFRSTDVIF*RIQIAPQLPKG
Trigger: GCCCTTTGGCAACTGAGGAGCAATTTGGATTCTCCAGAAGATAACATCTGTGGAGCGAAACGTACCCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548503.1
CDS CAA 90 bp GCTGCTTGTTCACTGGAGGACTCATCAGAGGTCCCATTCTCCTTTTaGTGTCTTTCATCAAACACCCTCATGGACTGCAGGGTGAGCTGT +
Preference number: 6 (lower is better)
Translates to: AACSLEDSSEVPFSF*CLSSNTLMDCRVSC
Trigger: ACAGCTCACCCTGCAGTCCATGAGGGTGTTTGATGAAAGACACAAAAAGGAGAATGGGACCTCTGATGAGTCCTCCAGTGAACAAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS GCA 72 bp CCCGAATCCTTTTTCCAGACGAGGACAAGTTTGCTATaGTTAGGGAGAAGCAAAGGAGAAGTCTGGGCTGAA +
Preference number: 6 (lower is better)
Translates to: PESFFQTRTSLL*LGRSKGEVWAE
Trigger: TTCAGCCCAGACTTCTCCTTTGCTTCTCCCTAAGCATAGCAAACTTGTCCTCGTCTGGAAAAAGGATTCGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552054.1
CDS CCA 72 bp TATTTTATATCCGACAAAGTGCACGGCAGCCTGAACTaGACTGGAATGAAAAGACGTGTCTGGGACGGGTCT +
Preference number: 6 (lower is better)
Translates to: YFISDKVHGSLN*TGMKRRVWDGS
Trigger: AGACCCGTCCCAGACACGTCTTTTCATTCCAGTCCAGTTCAGGCTGCCGTGCACTTTGTCGGATATAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CAA 72 bp TCACTGGAGGACTCATCAGAGGTCCCATTCTCCTTTTaGTGTCTTTCATCAAACACCCTCATGGACTGCAGG +
Preference number: 6 (lower is better)
Translates to: SLEDSSEVPFSF*CLSSNTLMDCR
Trigger: CCTGCAGTCCATGAGGGTGTTTGATGAAAGACACAAAAAGGAGAATGGGACCTCTGATGAGTCCTCCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257566.7
ENST00000349155.7
CDS CAA 90 bp TTTGGAGAGAAACACCCCGAATCCTTTTTCCAGACGAGGACAAGTTaGCTATGCTTAGGGAGAAGCAAAGGAGAAGTCTGGGCTGAAACT +
Preference number: 6 (lower is better)
Translates to: FGEKHPESFFQTRTS*LCLGRSKGEVWAET
Trigger: AGTTTCAGCCCAGACTTCTCCTTTGCTTCTCCCTAAGCATAGCAAACTTGTCCTCGTCTGGAAAAAGGATTCGGGGTGTTTCTCTCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552054.1
CDS GCA 72 bp TGCCTTAATCAAATCAAGGGCTTCAAATGCAATTCCTaGCCGCTGAAGATATTTCCGCGCCATTCGCGTCTT +
Preference number: 6 (lower is better)
Translates to: CLNQIKGFKCNS*PLKIFPRHSRL
Trigger: AAGACGCGAATGGCGCGGAAATATCTTCAGCGGGCAGGAATTGCATTTGAAGCCCTTGATTTGATTAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552054.1
CDS CAA 72 bp AAACACCCCGAATCCTTTTTCCAGACGAGGACAAGTTaGCTATGCTTAGGGAGAAGCAAAGGAGAAGTCTGG +
Preference number: 6 (lower is better)
Translates to: KHPESFFQTRTS*LCLGRSKGEVW
Trigger: CCAGACTTCTCCTTTGCTTCTCCCTAAGCATAGCAAACTTGTCCTCGTCTGGAAAAAGGATTCGGGGTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552054.1
CDS CCA 72 bp TCCGAAATGTACTATAAGGGAGTTTCAAGATGTCATTaGCTCTTACAATGTGGAACCGGGGCTGGTATTTGT +
Preference number: 6 (lower is better)
Translates to: SEMYYKGVSRCH*LLQCGTGAGIC
Trigger: ACAAATACCAGCCCCGGTTCCACATTGTAAGAGCCAATGACATCTTGAAACTCCCTTATAGTACATTTCGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257566.7
ENST00000349155.7
ENST00000548503.1
CDS GCA 72 bp GAATATTTATGCCTTAATCAAATCAAGGGCTTCAAATaGAATTCCTGCCCGCTGAAGATATTTCCGCGCCAT +
Preference number: 6 (lower is better)
Translates to: EYLCLNQIKGFK*NSCPLKIFPRH
Trigger: ATGGCGCGGAAATATCTTCAGCGGGCAGGAATTGCATTTGAAGCCCTTGATTTGATTAAGGCATAAATATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552054.1
CDS TCA 72 bp ATTGACGAGCCCAATCCACTTAAAGCCCTGAAAGGCTaGACTCTAGAGAGGAATATTTATGCCTTAATCAAA +
Preference number: 6 (lower is better)
Translates to: IDEPNPLKALKG*TLERNIYALIK
Trigger: TTTGATTAAGGCATAAATATTCCTCTCTAGAGTTCAGCCTTTCAGGGCTTTAAGTGGATTGGGCTCGTCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552054.1
CDS CAA 90 bp CTGAAGAGAGCAATGAAACTTACAAATCCATGTTTGTCTGAAATGTaGTTGGTGAGTTTCAGTTTGTGGAAAGTGACGACTTTGGACATC +
Preference number: 6 (lower is better)
Translates to: LKRAMKLTNPCLSEM*LVSFSLWKVTTLDI
Trigger: GATGTCCAAAGTCGTCACTTTCCACAAACTGAAACTCACCAACAACATTTCAGACAAACATGGATTTGTAAGTTTCATTGCTCTCTTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552054.1