RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBX22 (Homo sapiens)

Ensembl gene IDs: ENSG00000122145, ENSG00000277800

Ensembl transcript IDs: ENST00000373294.8, ENST00000373296.8, ENST00000476373.1, ENST00000619509.1, ENST00000625441.2, ENST00000626498.2, ENST00000626877.1, ENST00000628739.2, ENST00000628860.1, ENST00000628957.2

Found 385 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAATCCACCGGCACCACATCGATGGCCACATGGTACTGCTTCCCTaGATCCAACCCTTTCACCTTGACCCGAACAGAGGGGAACATCCG +
Preference number: 1 (lower is better)
Translates to: GIHRHHIDGHMVLLP*IQPFHLDPNRGEHP
Trigger: CGGATGTTCCCCTCTGTTCGGGTCAAGGTGAAAGGGTTGGATCCAGGGAAGCAGTACCATGTGGCCATCGATGTGGTGCCGGTGGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628739.2
3UTR GCA 90 bp CACCTTCAGTGGGCAAGGACTGAATCTGGGACAGGTCAACACTGCTaGCTTGCTCTATCACGTGCACTCGGGGTTTGTACTTATGCATGG +
Preference number: 1 (lower is better)
Translates to: HLQWARTESGTGQHC*LALSRALGVCTYAW
Trigger: CCATGCATAAGTACAAACCCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCCTTGCCCACTGAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR TCA 90 bp ATCAAAGCTGATGATCTGCCGCATCCAGGTCTCTCCCGAGCAGGGTaGGTCCGGGTGAACATAGAATCTAGGAATGATGCACAAATGGTC +
Preference number: 1 (lower is better)
Translates to: IKADDLPHPGLSRAG*VRVNIESRNDAQMV
Trigger: GACCATTTGTGCATCATTCCTAGATTCTATGTTCACCCGGACTCACCCTGCTCGGGAGAGACCTGGATGCGGCAGATCATCAGCTTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR TCA 90 bp GTTTCTTTAAAGGAGAATGTTTTAACACCTTCAGTGGGCAAGGACTaGATCTGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTGC +
Preference number: 1 (lower is better)
Translates to: VSLKENVLTPSVGKD*IWDRSTLLPCSITC
Trigger: GCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCCTTGCCCACTGAAGGTGTTAAAACATTCTCCTTTAAAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR TCA 90 bp AGGGAAGATAACATAGGCACTTCCATCATGAGTGGGGCTAAAGACTaGGAACTGTTGCTGCTTGCTAGTCTTTCAGGAGCCGGTAAAACA +
Preference number: 1 (lower is better)
Translates to: REDNIGTSIMSGAKD*ELLLLASLSGAGKT
Trigger: TGTTTTACCGGCTCCTGAAAGACTAGCAAGCAGCAACAGTTCTCAGTCTTTAGCCCCACTCATGATGGAAGTGCCTATGTTATCTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR TCA 90 bp ACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGCTCTCCCGAGCAGGGTaGGTCCGGGTGAACATAGAA +
Preference number: 2 (lower is better)
Translates to: TESGTGQHCCLALSRALGLSRAG*VRVNIE
Trigger: TTCTATGTTCACCCGGACTCACCCTGCTCGGGAGAG...CCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CCA 90 bp GGACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGCCGGCACCACATCGATaGCCACATGGTACTGCTTCC +
Preference number: 2 (lower is better)
Translates to: GLNLGQVNTAALLYHVHSPAPHR*PHGTAS
Trigger: GGAAGCAGTACCATGTGGCCATCGATGTGGTGCCGG...CGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR GCA 90 bp TTCAAAGGAGAGGGGGCCCCTCCACTAGAGGTCACTGGAGATGAGCCACTGCTTATGGCCACATGGTACTaGTTCCCTGGATCCAACCCT +
Preference number: 2 (lower is better)
Translates to: FKGEGAPPLEVTGDEPLLMATWY*FPGSNP
Trigger: AGGGTTGGATCCAGGGAAGCAGTACCATGTGGCCAT...AAGCAGTGGCTCATCTCCAGTGACCTCTAGTGGAGGGGCCCCCTCTCCTTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR GCA 90 bp GGACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGATGGCCACATGGTACTaGTTCCCTGGATCCAACCCT +
Preference number: 2 (lower is better)
Translates to: GLNLGQVNTAALLYHVHSMATWY*FPGSNP
Trigger: AGGGTTGGATCCAGGGAAGCAGTACCATGTGGCCAT...CGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR GCA 90 bp CTGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGGTTTGTATCAAAGCTGATGATCTaGCGCATCCAGGTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: LGQVNTAALLYHVHSGFVSKLMI*RIQVSP
Trigger: GGGAGAGACCTGGATGCGGCAGATCATCAGCTTTGA...TACAAACCCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR GCA 90 bp TTCAAAGGAGAGGGGGCCCCTCCACTAGAGGTCACTGGAGATGAGCCACTGCTTACAGGTCAACACTGCTaGCTTGCTCTATCACGTGCA +
Preference number: 2 (lower is better)
Translates to: FKGEGAPPLEVTGDEPLLTGQHC*LALSRA
Trigger: TGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGT...AAGCAGTGGCTCATCTCCAGTGACCTCTAGTGGAGGGGCCCCCTCTCCTTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR GCA 90 bp GGACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGGACAGGTCAACACTaGTGCCTTGCTCTATCACGT +
Preference number: 2 (lower is better)
Translates to: GLNLGQVNTAALLYHVHSGTGQH*CLALSR
Trigger: ACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCC...CGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CCA 90 bp CAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGGTTTGTACTTATGCCGGCACCACATCGATaGCCACATGGTACTGCTTCC +
Preference number: 2 (lower is better)
Translates to: QVNTAALLYHVHSGFVLMPAPHR*PHGTAS
Trigger: GGAAGCAGTACCATGTGGCCATCGATGTGGTGCCGG...CATAAGTACAAACCCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR CAA 90 bp TCGATGGCCACATGGTACTGCTTCCCTGGATCCAACCCTTTCACCTaGACCCGAACAGAGGGGAACATCCGCCAGAGCGGTAAATTAAGT +
Preference number: 2 (lower is better)
Translates to: SMATWYCFPGSNPFT*TRTEGNIRQSGKLS
Trigger: ACTTAATTTACCGCTCTGGCGGATGTTCCCCTCTGTTCGGGTCAAGGTGAAAGGGTTGGATCCAGGGAAGCAGTACCATGTGGCCATCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628739.2
3UTR-3UTR GCA 90 bp CTTCAGTGGGCAAGGACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTAATGGCCACATGGTACTaGTTCCCTGGATCCAACCCT +
Preference number: 2 (lower is better)
Translates to: LQWARTESGTGQHCCLALMATWY*FPGSNP
Trigger: AGGGTTGGATCCAGGGAAGCAGTACCATGTGGCCAT...TAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCCTTGCCCACTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR GCA 90 bp TTCAAAGGAGAGGGGGCCCCTCCACTAGAGGTCACTGGAGATGAGCCACTGCTTCCTTGCTCTATCACGTaGACTCGGGGTTTGTACTTA +
Preference number: 2 (lower is better)
Translates to: FKGEGAPPLEVTGDEPLLPCSIT*TRGLYL
Trigger: TAAGTACAAACCCCGAGTGCACGTGATAGAGCAAGG...AAGCAGTGGCTCATCTCCAGTGACCTCTAGTGGAGGGGCCCCCTCTCCTTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR GCA 90 bp CAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGGTTTGTACTTATGTCAACACTGCTGCCTTaGTCTATCACGTGCACTCGG +
Preference number: 2 (lower is better)
Translates to: QVNTAALLYHVHSGFVLMSTLLP*SITCTR
Trigger: CCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGA...CATAAGTACAAACCCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR CAA 90 bp TTCAGTGGGCAAGGACTGAATCTGGGACAGGTCAACACTGCTGCCTaGCTCTATCACGTGCACTCGGGGTTTGTACTTATGCATGGATTG +
Preference number: 2 (lower is better)
Translates to: FSGQGLNLGQVNTAA*LYHVHSGFVLMHGL
Trigger: CAATCCATGCATAAGTACAAACCCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCCTTGCCCACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR TCA 90 bp AAAGGAGAGGGGGCCCCTCCACTAGAGGTCACTGGAGATGAGCCACTGCTTCCAGCTTCACTGCTTTCATaGGAATTACATCCATCTTCT +
Preference number: 2 (lower is better)
Translates to: KGEGAPPLEVTGDEPLLPASLLS*ELHPSS
Trigger: AGAAGATGGATGTAATTCTCATGAAAGCAGTGAAGC...TGGAAGCAGTGGCTCATCTCCAGTGACCTCTAGTGGAGGGGCCCCCTCTCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628739.2
3UTR-3UTR TCA 90 bp TGTTGCTGCTTGCTAGTCTTTCAGGAGCCGGTAAAACAAGAGGTTGCTGTTGCCAGCATAGAGGCAGGTTaGCATTGGGCAGGTATGCCT +
Preference number: 2 (lower is better)
Translates to: CCCLLVFQEPVKQEVAVASIEAG*HWAGMP
Trigger: AGGCATACCTGCCCAATGTCAACCTGCCTCTATGCT...GGCAACAGCAACCTCTTGTTTTACCGGCTCCTGAAAGACTAGCAAGCAGCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR GCA 90 bp TGTTGCTGCTTGCTAGTCTTTCAGGAGCCGGTAAAACAAGAGGTTGCTGTTGCCTCAAAGCTGATGATCTaGCGCATCCAGGTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: CCCLLVFQEPVKQEVAVASKLMI*RIQVSP
Trigger: GGGAGAGACCTGGATGCGGCAGATCATCAGCTTTGA...GGCAACAGCAACCTCTTGTTTTACCGGCTCCTGAAAGACTAGCAAGCAGCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CCA 90 bp CAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGGTTTGTACTTATGCGTACCTATAGCGTTTaGAATCCACCGGCACCACAT +
Preference number: 2 (lower is better)
Translates to: QVNTAALLYHVHSGFVLMRTYSV*NPPAPH
Trigger: ATGTGGTGCCGGTGGATTCCAAACGCTATAGGTACG...CATAAGTACAAACCCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR GCA 90 bp TGCTTGCTAGTCTTTCAGGAGCCGGTAAAACAAGAGGTTGCTGTTGCCAAAAATGACATTGGGCAGGTATaGCTCTGGACAGGGCATTCC +
Preference number: 2 (lower is better)
Translates to: CLLVFQEPVKQEVAVAKNDIGQV*LWTGHS
Trigger: GGAATGCCCTGTCCAGAGGCATACCTGCCCAATGTC...ATTTTTGGCAACAGCAACCTCTTGTTTTACCGGCTCCTGAAAGACTAGCAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CCA 90 bp TTGGTGAGTTTCATGCGATCAAAGCTGATGATCTGCCGCATCCAGGTCTCTCCCGGAATGATGCACAAATaGTCTGTATTCCCAGCTACC +
Preference number: 2 (lower is better)
Translates to: LVSFMRSKLMICRIQVSPGMMHK*SVFPAT
Trigger: GGTAGCTGGGAATACAGACCATTTGTGCATCATTCC...GGGAGAGACCTGGATGCGGCAGATCATCAGCTTTGATCGCATGAAACTCACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CCA 90 bp CAACTAAGTGCTTCTGGGGTGATGGAGTTTGGCAGAAAAATATTTCCAGGTGACACATCGATGGCCACATaGTACTGCTTCCCTGGATCC +
Preference number: 2 (lower is better)
Translates to: QLSASGVMEFGRKIFPGDTSMAT*YCFPGS
Trigger: GGATCCAGGGAAGCAGTACCATGTGGCCATCGATGT...GTCACCTGGAAATATTTTTCTGCCAAACTCCATCACCCCAGAAGCACTTAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CCA 90 bp ACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATGGGCAGGTATGCCTCTaGACAGGGCATTCCAAGGGA +
Preference number: 2 (lower is better)
Translates to: TVVIHFKMVGTTYQSRWHGQVCL*TGHSKG
Trigger: TCCCTTGGAATGCCCTGTCCAGAGGCATACCTGCCC...ATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR CAA 90 bp TGCATGGATTGCAGAATGATGTGGCCTTTGTCATCCATCTCATTGTaGGTGAGTTTCATGCGATCAAAGCTGATGATCTGCCGCATCCAG +
Preference number: 2 (lower is better)
Translates to: CMDCRMMWPLSSISL*VSFMRSKLMICRIQ
Trigger: CTGGATGCGGCAGATCATCAGCTTTGATCGCATGAAACTCACCAACAATGAGATGGATGACAAAGGCCACATCATTCTGCAATCCATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR TCA 90 bp AAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGCTCTCCCGAGCAGGGTaGGTCCGGGTGAACATAGAA +
Preference number: 2 (lower is better)
Translates to: KRNLTVVIHFKMVGTTYQLSRAG*VRVNIE
Trigger: TTCTATGTTCACCCGGACTCACCCTGCTCGGGAGAG...CTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR GCA 90 bp CAACTAAGTGCTTCTGGGGTGATGGAGTTTGGCAGAAAAATATTTCCAGGTGACCCTTGCTCTATCACGTaGACTCGGGGTTTGTACTTA +
Preference number: 2 (lower is better)
Translates to: QLSASGVMEFGRKIFPGDPCSIT*TRGLYL
Trigger: TAAGTACAAACCCCGAGTGCACGTGATAGAGCAAGG...GTCACCTGGAAATATTTTTCTGCCAAACTCCATCACCCCAGAAGCACTTAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR GCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTTCAACACTGCTGCCTTaGTCTATCACGTGCACTCGG +
Preference number: 2 (lower is better)
Translates to: AYLILKLKATVIRDSCRFSTLLP*SITCTR
Trigger: CCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGA...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CCA 90 bp ACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATACATCGATGGCCACATaGTACTGCTTCCCTGGATCC +
Preference number: 2 (lower is better)
Translates to: TVVIHFKMVGTTYQSRWHTSMAT*YCFPGS
Trigger: GGATCCAGGGAAGCAGTACCATGTGGCCATCGATGT...ATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR TCA 90 bp ACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATAGCTACCATCCACTGTaGGCTGTGATAGACGTACCT +
Preference number: 2 (lower is better)
Translates to: TVVIHFKMVGTTYQSRWHSYHPL*AVIDVP
Trigger: AGGTACGTCTATCACAGCTCACAGTGGATGGTAGCT...ATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR TCA 90 bp ATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATAGAGAAATTCTCTCCCGAGCAGGGTaGGTCCGGGTGAACATAGAA +
Preference number: 2 (lower is better)
Translates to: IHFKMVGTTYQSRWHREILSRAG*VRVNIE
Trigger: TTCTATGTTCACCCGGACTCACCCTGCTCGGGAGAG...AATTTCTCTATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR TCA 90 bp CAACTAAGTGCTTCTGGGGTGATGGAGTTTGGCAGAAAAATATTTCCAGGTGACCCATCTCATTGTTGGTaGGTTTCATGCGATCAAAGC +
Preference number: 2 (lower is better)
Translates to: QLSASGVMEFGRKIFPGDPSHCW*VSCDQS
Trigger: GCTTTGATCGCATGAAACTCACCAACAATGAGATGG...GTCACCTGGAAATATTTTTCTGCCAAACTCCATCACCCCAGAAGCACTTAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR TCA 90 bp TTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGTTGGAAGCATAGAGGCAGGTTaGCATTGGGCAGGTATGCCT +
Preference number: 2 (lower is better)
Translates to: FAFSKRNLTVVIHFKMVGSIEAG*HWAGMP
Trigger: AGGCATACCTGCCCAATGTCAACCTGCCTCTATGCT...TCCAACCATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR GCA 90 bp TTGCTGGATACCAATGAACATGATTACATTTGCCTTCTCCAAAAGAAACTTGACGACATTGGGCAGGTATaGCTCTGGACAGGGCATTCC +
Preference number: 2 (lower is better)
Translates to: LLDTNEHDYICLLQKKLDDIGQV*LWTGHS
Trigger: GGAATGCCCTGTCCAGAGGCATACCTGCCCAATGTC...GTCAAGTTTCTTTTGGAGAAGGCAAATGTAATCATGTTCATTGGTATCCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTCGTACCTATAGCGTTTaGAATCCACCGGCACCACAT +
Preference number: 2 (lower is better)
Translates to: AYLILKLKATVIRDSCRFRTYSV*NPPAPH
Trigger: ATGTGGTGCCGGTGGATTCCAAACGCTATAGGTACG...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGCGTACCTATAGCGTTTaGAATCCACCGGCACCACAT +
Preference number: 2 (lower is better)
Translates to: IAYLILKLKATVIRDSCRRTYSV*NPPAPH
Trigger: ATGTGGTGCCGGTGGATTCCAAACGCTATAGGTACG...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CCA 90 bp ATTACATTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGGGCAGGTATGCCTCTaGACAGGGCATTCCAAGGGA +
Preference number: 2 (lower is better)
Translates to: ITFAFSKRNLTVVIHFKMGQVCL*TGHSKG
Trigger: TCCCTTGGAATGCCCTGTCCAGAGGCATACCTGCCC...CATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAATGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR TCA 90 bp AAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGTCAGTGGGCAAGGACTaGATCTGGGACAGGTCAACA +
Preference number: 2 (lower is better)
Translates to: KRNLTVVIHFKMVGTTYQSVGKD*IWDRST
Trigger: TGTTGACCTGTCCCAGATTCAGTCCTTGCCCACTGA...CTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR TCA 90 bp TTGCTGGATACCAATGAACATGATTACATTTGCCTTCTCCAAAAGAAACTTGACAGAGGTCACTGGAGATaGGCCACTGCTTCCACTTTG +
Preference number: 2 (lower is better)
Translates to: LLDTNEHDYICLLQKKLDRGHWR*ATASTL
Trigger: CAAAGTGGAAGCAGTGGCTCATCTCCAGTGACCTCT...GTCAAGTTTCTTTTGGAGAAGGCAAATGTAATCATGTTCATTGGTATCCAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR TCA 90 bp TTGCTGGATACCAATGAACATGATTACATTTGCCTTCTCCAAAAGAAACTTGACAGCATAGAGGCAGGTTaGCATTGGGCAGGTATGCCT +
Preference number: 2 (lower is better)
Translates to: LLDTNEHDYICLLQKKLDSIEAG*HWAGMP
Trigger: AGGCATACCTGCCCAATGTCAACCTGCCTCTATGCT...GTCAAGTTTCTTTTGGAGAAGGCAAATGTAATCATGTTCATTGGTATCCAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR TCA 90 bp TTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGTTGGAAGTGGGGCTAAAGACTaGGAACTGTTGCTGCTTGCT +
Preference number: 2 (lower is better)
Translates to: FAFSKRNLTVVIHFKMVGSGAKD*ELLLLA
Trigger: AGCAAGCAGCAACAGTTCTCAGTCTTTAGCCCCACT...TCCAACCATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR TCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTCGCTTTTTGAATTGGTaGCCCCCAGGGAAGATAACA +
Preference number: 2 (lower is better)
Translates to: AYLILKLKATVIRDSCRFRFLNW*PPGKIT
Trigger: TGTTATCTTCCCTGGGGGTCACCAATTCAAAAAGCG...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR GCA 90 bp AAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGTCAACACTGCTGCCTTaGTCTATCACGTGCACTCGG +
Preference number: 2 (lower is better)
Translates to: KRNLTVVIHFKMVGTTYQSTLLP*SITCTR
Trigger: CCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGA...CTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR TCA 90 bp ATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATAGAGAAATTAGAGGTCACTGGAGATaGGCCACTGCTTCCACTTTG +
Preference number: 2 (lower is better)
Translates to: IHFKMVGTTYQSRWHREIRGHWR*ATASTL
Trigger: CAAAGTGGAAGCAGTGGCTCATCTCCAGTGACCTCT...AATTTCTCTATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR TCA 90 bp TTGCTGGATACCAATGAACATGATTACATTTGCCTTCTCCAAAAGAAACTTGACAGTGGGGCTAAAGACTaGGAACTGTTGCTGCTTGCT +
Preference number: 2 (lower is better)
Translates to: LLDTNEHDYICLLQKKLDSGAKD*ELLLLA
Trigger: AGCAAGCAGCAACAGTTCTCAGTCTTTAGCCCCACT...GTCAAGTTTCTTTTGGAGAAGGCAAATGTAATCATGTTCATTGGTATCCAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR TCA 90 bp TTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGTTGGACGCTTTTTGAATTGGTaGCCCCCAGGGAAGATAACA +
Preference number: 2 (lower is better)
Translates to: FAFSKRNLTVVIHFKMVGRFLNW*PPGKIT
Trigger: TGTTATCTTCCCTGGGGGTCACCAATTCAAAAAGCG...TCCAACCATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR GCA 90 bp TTGCTGGATACCAATGAACATGATTACATTTGCCTTCTCCAAAAGAAACTTGACACAGGTCAACACTGCTaGCTTGCTCTATCACGTGCA +
Preference number: 2 (lower is better)
Translates to: LLDTNEHDYICLLQKKLDTGQHC*LALSRA
Trigger: TGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGT...GTCAAGTTTCTTTTGGAGAAGGCAAATGTAATCATGTTCATTGGTATCCAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR GCA 90 bp ATTACATTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGGGACAGGTCAACACTaGTGCCTTGCTCTATCACGT +
Preference number: 2 (lower is better)
Translates to: ITFAFSKRNLTVVIHFKMGTGQH*CLALSR
Trigger: ACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCC...CATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAATGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR GCA 90 bp AAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGCTGGAGATGAGCCACTaGTTCCACTTTGTGTGTCTG +
Preference number: 2 (lower is better)
Translates to: KRNLTVVIHFKMVGTTYQLEMSH*FHFVCL
Trigger: CAGACACACAAAGTGGAAGCAGTGGCTCATCTCCAG...CTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR GCA 90 bp ACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATAAAGGAGCAACTAAGTaGTTCTGGGGTGATGGAGTT +
Preference number: 2 (lower is better)
Translates to: TVVIHFKMVGTTYQSRWHKGATK*FWGDGV
Trigger: AACTCCATCACCCCAGAAGCACTTAGTTGCTCCTTT...ATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CCA 90 bp ATTACATTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGACATCGATGGCCACATaGTACTGCTTCCCTGGATCC +
Preference number: 2 (lower is better)
Translates to: ITFAFSKRNLTVVIHFKMTSMAT*YCFPGS
Trigger: GGATCCAGGGAAGCAGTACCATGTGGCCATCGATGT...CATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAATGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CCA 90 bp ACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATGGAATGATGCACAAATaGTCTGTATTCCCAGCTACC +
Preference number: 2 (lower is better)
Translates to: TVVIHFKMVGTTYQSRWHGMMHK*SVFPAT
Trigger: GGTAGCTGGGAATACAGACCATTTGTGCATCATTCC...ATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR TCA 90 bp ATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATAGAGAAATTAGCTACCATCCACTGTaGGCTGTGATAGACGTACCT +
Preference number: 2 (lower is better)
Translates to: IHFKMVGTTYQSRWHREISYHPL*AVIDVP
Trigger: AGGTACGTCTATCACAGCTCACAGTGGATGGTAGCT...AATTTCTCTATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR GCA 90 bp ATTACATTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGCTGGAGATGAGCCACTaGTTCCACTTTGTGTGTCTG +
Preference number: 2 (lower is better)
Translates to: ITFAFSKRNLTVVIHFKMLEMSH*FHFVCL
Trigger: CAGACACACAAAGTGGAAGCAGTGGCTCATCTCCAG...CATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAATGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR GCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTAAGACTGAGAACTGTTaGTGCTTGCTAGTCTTTCAG +
Preference number: 2 (lower is better)
Translates to: AYLILKLKATVIRDSCRFKTENC*CLLVFQ
Trigger: CTGAAAGACTAGCAAGCAGCAACAGTTCTCAGTCTT...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR TCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTGCTTCACTGCTTTCATaGGAATTACATCCATCTTCT +
Preference number: 2 (lower is better)
Translates to: AYLILKLKATVIRDSCRFASLLS*ELHPSS
Trigger: AGAAGATGGATGTAATTCTCATGAAAGCAGTGAAGC...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000628739.2
ENST00000628957.2
3UTR-3UTR GCA 90 bp TTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGTTGGAAAGACTGAGAACTGTTaGTGCTTGCTAGTCTTTCAG +
Preference number: 2 (lower is better)
Translates to: FAFSKRNLTVVIHFKMVGKTENC*CLLVFQ
Trigger: CTGAAAGACTAGCAAGCAGCAACAGTTCTCAGTCTT...TCCAACCATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR GCA 90 bp TTGCTGGATACCAATGAACATGATTACATTTGCCTTCTCCAAAAGAAACTTGACAAAGGAGCAACTAAGTaGTTCTGGGGTGATGGAGTT +
Preference number: 2 (lower is better)
Translates to: LLDTNEHDYICLLQKKLDKGATK*FWGDGV
Trigger: AACTCCATCACCCCAGAAGCACTTAGTTGCTCCTTT...GTCAAGTTTCTTTTGGAGAAGGCAAATGTAATCATGTTCATTGGTATCCAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CCA 90 bp TTGCTGGATACCAATGAACATGATTACATTTGCCTTCTCCAAAAGAAACTTGACGGAATGATGCACAAATaGTCTGTATTCCCAGCTACC +
Preference number: 2 (lower is better)
Translates to: LLDTNEHDYICLLQKKLDGMMHK*SVFPAT
Trigger: GGTAGCTGGGAATACAGACCATTTGTGCATCATTCC...GTCAAGTTTCTTTTGGAGAAGGCAAATGTAATCATGTTCATTGGTATCCAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CCA 90 bp TTGCTGGATACCAATGAACATGATTACATTTGCCTTCTCCAAAAGAAACTTGACGTAGATACTGATCACTaGAGTCTTCAGATGAACCGC +
Preference number: 2 (lower is better)
Translates to: LLDTNEHDYICLLQKKLDVDTDH*SLQMNR
Trigger: GCGGTTCATCTGAAGACTCCAGTGATCAGTATCTAC...GTCAAGTTTCTTTTGGAGAAGGCAAATGTAATCATGTTCATTGGTATCCAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CCA 90 bp ATTACATTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGATGGTACTGCTTCCCTaGATCCAACCCTTTCACCTT +
Preference number: 2 (lower is better)
Translates to: ITFAFSKRNLTVVIHFKMMVLLP*IQPFHL
Trigger: AAGGTGAAAGGGTTGGATCCAGGGAAGCAGTACCAT...CATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAATGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628739.2
3UTR-3UTR TCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTATGCAGTTAACGTGGTaGACTAGCTTCAGTATAATT +
Preference number: 2 (lower is better)
Translates to: AYLILKLKATVIRDSCRFMQLTW*TSFSII
Trigger: AATTATACTGAAGCTAGTTCACCACGTTAACTGCAT...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000628739.2
ENST00000628957.2
3UTR-3UTR TCA 90 bp ATTACATTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGCCATCTCATTGTTGGTaGGTTTCATGCGATCAAAGC +
Preference number: 2 (lower is better)
Translates to: ITFAFSKRNLTVVIHFKMPSHCW*VSCDQS
Trigger: GCTTTGATCGCATGAAACTCACCAACAATGAGATGG...CATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAATGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR GCA 90 bp ACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATACAAGAGGTTGCTGTTaGCAAAAATTAGTTGGACAA +
Preference number: 2 (lower is better)
Translates to: TVVIHFKMVGTTYQSRWHTRGCC*QKLVGQ
Trigger: TTGTCCAACTAATTTTTGGCAACAGCAACCTCTTGT...ATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR CAA 90 bp TGGATACCAATGAACATGATTACATTTGCCTTCTCCAAAAGAAACTaGACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAG +
Preference number: 2 (lower is better)
Translates to: WIPMNMITFAFSKRN*TVVIHFKMVGTTYQ
Trigger: CTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAATGTAATCATGTTCATTGGTATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR GCA 90 bp AAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGTCCACTTTGTGTGTCTaGGCCAAAGGTTTTAAAATC +
Preference number: 2 (lower is better)
Translates to: KRNLTVVIHFKMVGTTYQSTLCV*AKGFKI
Trigger: GATTTTAAAACCTTTGGCGCAGACACACAAAGTGGA...CTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR GCA 90 bp ACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATGGTAAAACAAGAGGTTaGTGTTGCCAAAAATTAGTT +
Preference number: 2 (lower is better)
Translates to: TVVIHFKMVGTTYQSRWHGKTRG*CCQKLV
Trigger: AACTAATTTTTGGCAACAGCAACCTCTTGTTTTACC...ATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR GCA 90 bp ATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATAGAGAAATTACAAGAGGTTGCTGTTaGCAAAAATTAGTTGGACAA +
Preference number: 2 (lower is better)
Translates to: IHFKMVGTTYQSRWHREITRGCC*QKLVGQ
Trigger: TTGTCCAACTAATTTTTGGCAACAGCAACCTCTTGT...AATTTCTCTATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR TCA 72 bp AGGAGAGGGGGCCCCTCCACTAGAGGTCACTGGAGATaGGCCACTGCTTCCACTTTGTGTGTCTGCGCCAAA +
Preference number: 3 (lower is better)
Translates to: RRGGPSTRGHWR*ATASTLCVCAK
Trigger: TTTGGCGCAGACACACAAAGTGGAAGCAGTGGCTCATCTCCAGTGACCTCTAGTGGAGGGGCCCCCTCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR GCA 72 bp GAATCCACCGGCACCACATCGATGGCCACATGGTACTaGTTCCCTGGATCCAACCCTTTCACCTTGACCCGA +
Preference number: 3 (lower is better)
Translates to: ESTGTTSMATWY*FPGSNPFTLTR
Trigger: TCGGGTCAAGGTGAAAGGGTTGGATCCAGGGAAGCAGTACCATGTGGCCATCGATGTGGTGCCGGTGGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628739.2
3UTR GCA 72 bp CAGTGGGCAAGGACTGAATCTGGGACAGGTCAACACTaGTGCCTTGCTCTATCACGTGCACTCGGGGTTTGT +
Preference number: 3 (lower is better)
Translates to: QWARTESGTGQH*CLALSRALGVC
Trigger: ACAAACCCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCCTTGCCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp CTTCAGTGGGCAAGGACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTAGTCAACACTGCTGCCTaGCTCTATCACGTGCACTCG +
Preference number: 3 (lower is better)
Translates to: LQWARTESGTGQHCCLALVNTAA*LYHVHS
Trigger: CGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGAC...TAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCCTTGCCCACTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR TCA 72 bp GATGATCTGCCGCATCCAGGTCTCTCCCGAGCAGGGTaGGTCCGGGTGAACATAGAATCTAGGAATGATGCA +
Preference number: 3 (lower is better)
Translates to: DDLPHPGLSRAG*VRVNIESRNDA
Trigger: TGCATCATTCCTAGATTCTATGTTCACCCGGACTCACCCTGCTCGGGAGAGACCTGGATGCGGCAGATCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp AAAGGAGAGGGGGCCCCTCCACTAGAGGTCACTGGAGATGAGCCACTGCTTCCACGTAATCTGTTGGTTTaGGTAAGCCGTTACTGTGGT +
Preference number: 3 (lower is better)
Translates to: KGEGAPPLEVTGDEPLLPRNLLV*VSRYCG
Trigger: ACCACAGTAACGGCTTACCAAAACCAACAGATTACG...TGGAAGCAGTGGCTCATCTCCAGTGACCTCTAGTGGAGGGGCCCCCTCTCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp TGTTGCTGCTTGCTAGTCTTTCAGGAGCCGGTAAAACAAGAGGTTGCTGTTGCCAGAGGCAGGTTGACATaGGGCAGGTATGCCTCTGGA +
Preference number: 3 (lower is better)
Translates to: CCCLLVFQEPVKQEVAVARGRLT*GRYASG
Trigger: TCCAGAGGCATACCTGCCCAATGTCAACCTGCCTCT...GGCAACAGCAACCTCTTGTTTTACCGGCTCCTGAAAGACTAGCAAGCAGCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp AAAGGAGAGGGGGCCCCTCCACTAGAGGTCACTGGAGATGAGCCACTGCTTCCAATTGCATATCTCATTTaGAAGCTCAAGGCCACTGTA +
Preference number: 3 (lower is better)
Translates to: KGEGAPPLEVTGDEPLLPIAYLI*KLKATV
Trigger: TACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT...TGGAAGCAGTGGCTCATCTCCAGTGACCTCTAGTGGAGGGGCCCCCTCTCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR GCA 72 bp TGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTaGACTCGGGGTTTGTACTTATGCATGGATTGCAGA +
Preference number: 3 (lower is better)
Translates to: WDRSTLLPCSIT*TRGLYLCMDCR
Trigger: TCTGCAATCCATGCATAAGTACAAACCCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp ACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGTTGTCATCCATCTCATaGTTGGTGAGTTTCATGCGA +
Preference number: 3 (lower is better)
Translates to: TESGTGQHCCLALSRALGLSSIS*LVSFMR
Trigger: TCGCATGAAACTCACCAACAATGAGATGGATGACAA...CCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp CTGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGGTTTGTATTGTCATCCATCTCATaGTTGGTGAGTTTCATGCGA +
Preference number: 3 (lower is better)
Translates to: LGQVNTAALLYHVHSGFVLSSIS*LVSFMR
Trigger: TCGCATGAAACTCACCAACAATGAGATGGATGACAA...TACAAACCCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp CTTCAGTGGGCAAGGACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTATTGTCATCCATCTCATaGTTGGTGAGTTTCATGCGA +
Preference number: 3 (lower is better)
Translates to: LQWARTESGTGQHCCLALLSSIS*LVSFMR
Trigger: TCGCATGAAACTCACCAACAATGAGATGGATGACAA...TAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCCTTGCCCACTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp CAACTAAGTGCTTCTGGGGTGATGGAGTTTGGCAGAAAAATATTTCCAGGTGACGTCAACACTGCTGCCTaGCTCTATCACGTGCACTCG +
Preference number: 3 (lower is better)
Translates to: QLSASGVMEFGRKIFPGDVNTAA*LYHVHS
Trigger: CGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGAC...GTCACCTGGAAATATTTTTCTGCCAAACTCCATCACCCCAGAAGCACTTAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp TGCTTGCTAGTCTTTCAGGAGCCGGTAAAACAAGAGGTTGCTGTTGCCAAAAATGCCACTGCTTCCACTTaGTGTGTCTGCGCCAAAGGT +
Preference number: 3 (lower is better)
Translates to: CLLVFQEPVKQEVAVAKNATAST*CVCAKG
Trigger: ACCTTTGGCGCAGACACACAAAGTGGAAGCAGTGGC...ATTTTTGGCAACAGCAACCTCTTGTTTTACCGGCTCCTGAAAGACTAGCAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp GGGTTTGTACTTATGCATGGATTGCAGAATGATGTGGCCTTTGTCATCCATCTCTCCAACCCTTTCACCTaGACCCGAACAGAGGGGAAC +
Preference number: 3 (lower is better)
Translates to: GFVLMHGLQNDVAFVIHLSNPFT*TRTEGN
Trigger: GTTCCCCTCTGTTCGGGTCAAGGTGAAAGGGTTGGA...GAGATGGATGACAAAGGCCACATCATTCTGCAATCCATGCATAAGTACAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628739.2
3UTR TCA 72 bp AAGGAGAATGTTTTAACACCTTCAGTGGGCAAGGACTaGATCTGGGACAGGTCAACACTGCTGCCTTGCTCT +
Preference number: 3 (lower is better)
Translates to: KENVLTPSVGKD*IWDRSTLLPCS
Trigger: AGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCCTTGCCCACTGAAGGTGTTAAAACATTCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR TCA 72 bp AACATAGGCACTTCCATCATGAGTGGGGCTAAAGACTaGGAACTGTTGCTGCTTGCTAGTCTTTCAGGAGCC +
Preference number: 3 (lower is better)
Translates to: NIGTSIMSGAKD*ELLLLASLSGA
Trigger: GGCTCCTGAAAGACTAGCAAGCAGCAACAGTTCTCAGTCTTTAGCCCCACTCATGATGGAAGTGCCTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR TCA 72 bp GCACAAATGGTCTGTATTCCCAGCTACCATCCACTGTaGGCTGTGATAGACGTACCTATAGCGTTTGGAATC +
Preference number: 3 (lower is better)
Translates to: AQMVCIPSYHPL*AVIDVPIAFGI
Trigger: GATTCCAAACGCTATAGGTACGTCTATCACAGCTCACAGTGGATGGTAGCTGGGAATACAGACCATTTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp TTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGTTGGAGCCACTGCTTCCACTTaGTGTGTCTGCGCCAAAGGT +
Preference number: 3 (lower is better)
Translates to: FAFSKRNLTVVIHFKMVGATAST*CVCAKG
Trigger: ACCTTTGGCGCAGACACACAAAGTGGAAGCAGTGGC...TCCAACCATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp TTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGTTGGAGAGAACTGTTGCTGCTaGCTAGTCTTTCAGGAGCCG +
Preference number: 3 (lower is better)
Translates to: FAFSKRNLTVVIHFKMVGENCCC*LVFQEP
Trigger: CGGCTCCTGAAAGACTAGCAAGCAGCAACAGTTCTC...TCCAACCATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp ACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATGAACCGCTTTTTGAATaGGTGACCCCCAGGGAAGAT +
Preference number: 3 (lower is better)
Translates to: TVVIHFKMVGTTYQSRWHEPLFE*VTPRED
Trigger: ATCTTCCCTGGGGGTCACCAATTCAAAAAGCGGTTC...ATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp GGGTTTGTACTTATGCATGGATTGCAGAATGATGTGGCCTTTGTCATCCATCTCAGAATGATGTGGCCTTaGTCATCCATCTCATTGTTG +
Preference number: 3 (lower is better)
Translates to: GFVLMHGLQNDVAFVIHLRMMWP*SSISLL
Trigger: CAACAATGAGATGGATGACAAAGGCCACATCATTCT...GAGATGGATGACAAAGGCCACATCATTCTGCAATCCATGCATAAGTACAAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp TGCTTGCTAGTCTTTCAGGAGCCGGTAAAACAAGAGGTTGCTGTTGCCAAAAATAGAATGATGTGGCCTTaGTCATCCATCTCATTGTTG +
Preference number: 3 (lower is better)
Translates to: CLLVFQEPVKQEVAVAKNRMMWP*SSISLL
Trigger: CAACAATGAGATGGATGACAAAGGCCACATCATTCT...ATTTTTGGCAACAGCAACCTCTTGTTTTACCGGCTCCTGAAAGACTAGCAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp ATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATAGAGAAATTGTCAACACTGCTGCCTaGCTCTATCACGTGCACTCG +
Preference number: 3 (lower is better)
Translates to: IHFKMVGTTYQSRWHREIVNTAA*LYHVHS
Trigger: CGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGAC...AATTTCTCTATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp TTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGTTGGAGAACCGCTTTTTGAATaGGTGACCCCCAGGGAAGAT +
Preference number: 3 (lower is better)
Translates to: FAFSKRNLTVVIHFKMVGEPLFE*VTPRED
Trigger: ATCTTCCCTGGGGGTCACCAATTCAAAAAGCGGTTC...TCCAACCATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp GGGTTTGTACTTATGCATGGATTGCAGAATGATGTGGCCTTTGTCATCCATCTCATTGCATATCTCATTTaGAAGCTCAAGGCCACTGTA +
Preference number: 3 (lower is better)
Translates to: GFVLMHGLQNDVAFVIHLIAYLI*KLKATV
Trigger: TACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT...GAGATGGATGACAAAGGCCACATCATTCTGCAATCCATGCATAAGTACAAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp AAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGGAACCGCTTTTTGAATaGGTGACCCCCAGGGAAGAT +
Preference number: 3 (lower is better)
Translates to: KRNLTVVIHFKMVGTTYQEPLFE*VTPRED
Trigger: ATCTTCCCTGGGGGTCACCAATTCAAAAAGCGGTTC...CTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp TTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGTTGGACGTAATCTGTTGGTTTaGGTAAGCCGTTACTGTGGT +
Preference number: 3 (lower is better)
Translates to: FAFSKRNLTVVIHFKMVGRNLLV*VSRYCG
Trigger: ACCACAGTAACGGCTTACCAAAACCAACAGATTACG...TCCAACCATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTATTGCATATCTCATTTaGAAGCTCAAGGCCACTGTA +
Preference number: 3 (lower is better)
Translates to: AYLILKLKATVIRDSCRFIAYLI*KLKATV
Trigger: TACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
3UTR-3UTR CAA 90 bp TTGCTGGATACCAATGAACATGATTACATTTGCCTTCTCCAAAAGAAACTTGACAGAATGATGTGGCCTTaGTCATCCATCTCATTGTTG +
Preference number: 3 (lower is better)
Translates to: LLDTNEHDYICLLQKKLDRMMWP*SSISLL
Trigger: CAACAATGAGATGGATGACAAAGGCCACATCATTCT...GTCAAGTTTCTTTTGGAGAAGGCAAATGTAATCATGTTCATTGGTATCCAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp TTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGTTGGAAACAAGAGGTTGCTGTaGCCAAAAATTAGTTGGACA +
Preference number: 3 (lower is better)
Translates to: FAFSKRNLTVVIHFKMVGNKRLL*PKISWT
Trigger: TGTCCAACTAATTTTTGGCAACAGCAACCTCTTGTT...TCCAACCATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp ACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATTTCACTTTAAGATGGTaGGAACCACTTATCAGTCTA +
Preference number: 3 (lower is better)
Translates to: TVVIHFKMVGTTYQSRWHFTLRW*EPLISL
Trigger: TAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAA...ATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp ATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATAGAGAAATTTCATCCATCTCATTGTaGGTGAGTTTCATGCGATCA +
Preference number: 3 (lower is better)
Translates to: IHFKMVGTTYQSRWHREISSISL*VSFMRS
Trigger: TGATCGCATGAAACTCACCAACAATGAGATGGATGA...AATTTCTCTATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR-3UTR CAA 90 bp ATTACATTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGTCATCCATCTCATTGTaGGTGAGTTTCATGCGATCA +
Preference number: 3 (lower is better)
Translates to: ITFAFSKRNLTVVIHFKMSSISL*VSFMRS
Trigger: TGATCGCATGAAACTCACCAACAATGAGATGGATGA...CATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAATGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp CTGCTTCCCTGGATCCAACCCTTTCACCTTGACCCGAACAGAGGGGAACATCCGCGTAGCCGCTGTCGCTaGCGCAGCCAGAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LLPWIQPFHLDPNRGEHPRSRCR*RSQRKQ
Trigger: CTGCTTCCTCTGGCTGCGGCAGCGACAGCGGCTACG...CGGATGTTCCCCTCTGTTCGGGTCAAGGTGAAAGGGTTGGATCCAGGGAAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628739.2
CDS-3UTR GCA 90 bp ATAGCGTTTGGAATCCACCGGCACCACATCGATGGCCACATGGTACTGCTTCCCCGTAGCCGCTGTCGCTaGCGCAGCCAGAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: IAFGIHRHHIDGHMVLLPRSRCR*RSQRKQ
Trigger: CTGCTTCCTCTGGCTGCGGCAGCGACAGCGGCTACG...GGGAAGCAGTACCATGTGGCCATCGATGTGGTGCCGGTGGATTCCAAACGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp TTCAAAGGAGAGGGGGCCCCTCCACTAGAGGTCACTGGAGATGAGCCACTGCTTTCCCGCAGCTCAGGCTaGTCCGCCTGTATTGGGTCT +
Preference number: 4 (lower is better)
Translates to: FKGEGAPPLEVTGDEPLLSRSSG*SACIGS
Trigger: AGACCCAATACAGGCGGAGCAGCCTGAGCTGCGGGA...AAGCAGTGGCTCATCTCCAGTGACCTCTAGTGGAGGGGCCCCCTCTCCTTTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000625441.2
ENST00000626498.2
CDS-3UTR TCA 90 bp TTCAAAGGAGAGGGGGCCCCTCCACTAGAGGTCACTGGAGATGAGCCACTGCTTCTCTCCCGAGCAGGGTaGGTCCGGGTGAACATAGAA +
Preference number: 4 (lower is better)
Translates to: FKGEGAPPLEVTGDEPLLLSRAG*VRVNIE
Trigger: TTCTATGTTCACCCGGACTCACCCTGCTCGGGAGAG...AAGCAGTGGCTCATCTCCAGTGACCTCTAGTGGAGGGGCCCCCTCTCCTTTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp CTGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGGTTTGTATCCCGCAGCTCAGGCTaGTCCGCCTGTATTGGGTCT +
Preference number: 4 (lower is better)
Translates to: LGQVNTAALLYHVHSGFVSRSSG*SACIGS
Trigger: AGACCCAATACAGGCGGAGCAGCCTGAGCTGCGGGA...TACAAACCCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625441.2
ENST00000626498.2
CDS-3UTR GCA 90 bp AAAGGAGAGGGGGCCCCTCCACTAGAGGTCACTGGAGATGAGCCACTGCTTCCAGACATTGGGCAGGTATaGCTCTGGACAGGGCATTCC +
Preference number: 4 (lower is better)
Translates to: KGEGAPPLEVTGDEPLLPDIGQV*LWTGHS
Trigger: GGAATGCCCTGTCCAGAGGCATACCTGCCCAATGTC...TGGAAGCAGTGGCTCATCTCCAGTGACCTCTAGTGGAGGGGCCCCCTCTCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR CAA 72 bp ACATGGTACTGCTTCCCTGGATCCAACCCTTTCACCTaGACCCGAACAGAGGGGAACATCCGCCAGAGCGGT +
Preference number: 4 (lower is better)
Translates to: TWYCFPGSNPFT*TRTEGNIRQSG
Trigger: ACCGCTCTGGCGGATGTTCCCCTCTGTTCGGGTCAAGGTGAAAGGGTTGGATCCAGGGAAGCAGTACCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628739.2
CDS-3UTR TCA 90 bp TGCTTCCCTGGATCCAACCCTTTCACCTTGACCCGAACAGAGGGGAACATCCGCAGAGGTCACTGGAGATaGGCCACTGCTTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: CFPGSNPFTLTRTEGNIRRGHWR*ATASTL
Trigger: CAAAGTGGAAGCAGTGGCTCATCTCCAGTGACCTCT...GCGGATGTTCCCCTCTGTTCGGGTCAAGGTGAAAGGGTTGGATCCAGGGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628739.2
CDS-3UTR GCA 90 bp AAAGGAGAGGGGGCCCCTCCACTAGAGGTCACTGGAGATGAGCCACTGCTTCCAAGAGCTCATTCACTCTaGAAATGCCTGCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: KGEGAPPLEVTGDEPLLPRAHSL*KCLQQL
Trigger: GAGCTGCTGCAGGCATTTGCAGAGTGAATGAGCTCT...TGGAAGCAGTGGCTCATCTCCAGTGACCTCTAGTGGAGGGGCCCCCTCTCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000625441.2
ENST00000626498.2
CDS-3UTR CCA 90 bp GAGTTTCATGCGATCAAAGCTGATGATCTGCCGCATCCAGGTCTCTCCCGAGCACCGGCACCACATCGATaGCCACATGGTACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: EFHAIKADDLPHPGLSRAPAPHR*PHGTAS
Trigger: GGAAGCAGTACCATGTGGCCATCGATGTGGTGCCGG...TGCTCGGGAGAGACCTGGATGCGGCAGATCATCAGCTTTGATCGCATGAAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CCA 90 bp CTTCAGTGGGCAAGGACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTAGGGCAGGTATGCCTCTaGACAGGGCATTCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: LQWARTESGTGQHCCLALGQVCL*TGHSKG
Trigger: TCCCTTGGAATGCCCTGTCCAGAGGCATACCTGCCC...TAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCCTTGCCCACTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CCA 90 bp GAGTTTCATGCGATCAAAGCTGATGATCTGCCGCATCCAGGTCTCTCCCGAGCAGGGCAGGTATGCCTCTaGACAGGGCATTCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: EFHAIKADDLPHPGLSRAGQVCL*TGHSKG
Trigger: TCCCTTGGAATGCCCTGTCCAGAGGCATACCTGCCC...TGCTCGGGAGAGACCTGGATGCGGCAGATCATCAGCTTTGATCGCATGAAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR TCA 90 bp CTGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGGTTTGTAAGAGGTCACTGGAGATaGGCCACTGCTTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: LGQVNTAALLYHVHSGFVRGHWR*ATASTL
Trigger: CAAAGTGGAAGCAGTGGCTCATCTCCAGTGACCTCT...TACAAACCCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR TCA 90 bp TTCAAAGGAGAGGGGGCCCCTCCACTAGAGGTCACTGGAGATGAGCCACTGCTTAGTGGGGCTAAAGACTaGGAACTGTTGCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: FKGEGAPPLEVTGDEPLLSGAKD*ELLLLA
Trigger: AGCAAGCAGCAACAGTTCTCAGTCTTTAGCCCCACT...AAGCAGTGGCTCATCTCCAGTGACCTCTAGTGGAGGGGCCCCCTCTCCTTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR TCA 90 bp CTGCTTCCCTGGATCCAACCCTTTCACCTTGACCCGAACAGAGGGGAACATCCGAGTGGGGCTAAAGACTaGGAACTGTTGCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: LLPWIQPFHLDPNRGEHPSGAKD*ELLLLA
Trigger: AGCAAGCAGCAACAGTTCTCAGTCTTTAGCCCCACT...CGGATGTTCCCCTCTGTTCGGGTCAAGGTGAAAGGGTTGGATCCAGGGAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628739.2
CDS-3UTR GCA 90 bp CAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGGTTTGTACTTATGGACTTTCAGAGCTGTTaGCGTAGCCGCTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: QVNTAALLYHVHSGFVLMDFQSC*RSRCRC
Trigger: GCAGCGACAGCGGCTACGGCAACAGCTCTGAAAGTC...CATAAGTACAAACCCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp ATAGCGTTTGGAATCCACCGGCACCACATCGATGGCCACATGGTACTGCTTCCCGGGACAGGTCAACACTaGTGCCTTGCTCTATCACGT +
Preference number: 4 (lower is better)
Translates to: IAFGIHRHHIDGHMVLLPGTGQH*CLALSR
Trigger: ACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCC...GGGAAGCAGTACCATGTGGCCATCGATGTGGTGCCGGTGGATTCCAAACGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp TTCAAAGGAGAGGGGGCCCCTCCACTAGAGGTCACTGGAGATGAGCCACTGCTTCTGGAGATGAGCCACTaGTTCCACTTTGTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: FKGEGAPPLEVTGDEPLLLEMSH*FHFVCL
Trigger: CAGACACACAAAGTGGAAGCAGTGGCTCATCTCCAG...AAGCAGTGGCTCATCTCCAGTGACCTCTAGTGGAGGGGCCCCCTCTCCTTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp AAAGGAGAGGGGGCCCCTCCACTAGAGGTCACTGGAGATGAGCCACTGCTTCCACATTCACTCTGCAAATaGCTGCAGCAGCTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: KGEGAPPLEVTGDEPLLPHSLCK*LQQLFS
Trigger: TGAGAAGAGCTGCTGCAGGCATTTGCAGAGTGAATG...TGGAAGCAGTGGCTCATCTCCAGTGACCTCTAGTGGAGGGGCCCCCTCTCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000625441.2
ENST00000626498.2
CDS-3UTR GCA 90 bp ACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGCAAGAAGCAGTGTGTTaGTGTGTCAAGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TESGTGQHCCLALSRALGQEAVC*CVKRPG
Trigger: GCCTGGCCTCTTGACACAGCAACACACTGCTTCTTG...CCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000625441.2
ENST00000626498.2
CDS-3UTR CCA 90 bp CTGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGGTTTGTAACATCGATGGCCACATaGTACTGCTTCCCTGGATCC +
Preference number: 4 (lower is better)
Translates to: LGQVNTAALLYHVHSGFVTSMAT*YCFPGS
Trigger: GGATCCAGGGAAGCAGTACCATGTGGCCATCGATGT...TACAAACCCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR TCA 90 bp TGCTTCCCTGGATCCAACCCTTTCACCTTGACCCGAACAGAGGGGAACATCCGCCGCTTTTTGAATTGGTaGCCCCCAGGGAAGATAACA +
Preference number: 4 (lower is better)
Translates to: CFPGSNPFTLTRTEGNIRRFLNW*PPGKIT
Trigger: TGTTATCTTCCCTGGGGGTCACCAATTCAAAAAGCG...GCGGATGTTCCCCTCTGTTCGGGTCAAGGTGAAAGGGTTGGATCCAGGGAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000628739.2
CDS-3UTR GCA 90 bp CTTCAGTGGGCAAGGACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTATCAACACTGCTGCCTTaGTCTATCACGTGCACTCGG +
Preference number: 4 (lower is better)
Translates to: LQWARTESGTGQHCCLALSTLLP*SITCTR
Trigger: CCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGA...TAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCCTTGCCCACTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp CTGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGGTTTGTAACAGGTCAACACTGCTaGCTTGCTCTATCACGTGCA +
Preference number: 4 (lower is better)
Translates to: LGQVNTAALLYHVHSGFVTGQHC*LALSRA
Trigger: TGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGT...TACAAACCCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp GGACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGCACTCTGCAAATGCCTaGAGCAGCTCTTCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: GLNLGQVNTAALLYHVHSHSANA*SSSSQE
Trigger: CTCTTGAGAAGAGCTGCTGCAGGCATTTGCAGAGTG...CGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000625441.2
ENST00000626498.2
CDS-3UTR CCA 90 bp CTTCAGTGGGCAAGGACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTAACATCGATGGCCACATaGTACTGCTTCCCTGGATCC +
Preference number: 4 (lower is better)
Translates to: LQWARTESGTGQHCCLALTSMAT*YCFPGS
Trigger: GGATCCAGGGAAGCAGTACCATGTGGCCATCGATGT...TAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCCTTGCCCACTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR TCA 90 bp CTTCAGTGGGCAAGGACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTAAGAGGAAGCAGATGTTaGGGGCTCTGTCTTAGGTTG +
Preference number: 4 (lower is better)
Translates to: LQWARTESGTGQHCCLALRGSRC*GLCLRL
Trigger: CAACCTAAGACAGAGCCCTCAACATCTGCTTCCTCT...TAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCCTTGCCCACTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625441.2
ENST00000626498.2
CDS-3UTR TCA 90 bp TTGGTGAGTTTCATGCGATCAAAGCTGATGATCTGCCGCATCCAGGTCTCTCCCAGCATAGAGGCAGGTTaGCATTGGGCAGGTATGCCT +
Preference number: 4 (lower is better)
Translates to: LVSFMRSKLMICRIQVSPSIEAG*HWAGMP
Trigger: AGGCATACCTGCCCAATGTCAACCTGCCTCTATGCT...GGGAGAGACCTGGATGCGGCAGATCATCAGCTTTGATCGCATGAAACTCACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR TCA 90 bp TTCAAAGGAGAGGGGGCCCCTCCACTAGAGGTCACTGGAGATGAGCCACTGCTTGGTGCTTGTAGATACTaGTCACTGGAGTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: FKGEGAPPLEVTGDEPLLGACRY*SLESSD
Trigger: ATCTGAAGACTCCAGTGATCAGTATCTACAAGCACC...AAGCAGTGGCTCATCTCCAGTGACCTCTAGTGGAGGGGCCCCCTCTCCTTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR TCA 90 bp TTGGTGAGTTTCATGCGATCAAAGCTGATGATCTGCCGCATCCAGGTCTCTCCCCCAGCCCAGTGGTTCTaGAGTCAAGTCTCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: LVSFMRSKLMICRIQVSPPAQWF*SQVSVR
Trigger: TCTGACTGAGACTTGACTTCAGAACCACTGGGCTGG...GGGAGAGACCTGGATGCGGCAGATCATCAGCTTTGATCGCATGAAACTCACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000625441.2
ENST00000626498.2
CDS-3UTR GCA 90 bp TTGGTGAGTTTCATGCGATCAAAGCTGATGATCTGCCGCATCCAGGTCTCTCCCTCAACACTGCTGCCTTaGTCTATCACGTGCACTCGG +
Preference number: 4 (lower is better)
Translates to: LVSFMRSKLMICRIQVSPSTLLP*SITCTR
Trigger: CCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGA...GGGAGAGACCTGGATGCGGCAGATCATCAGCTTTGATCGCATGAAACTCACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp TGTTGCTGCTTGCTAGTCTTTCAGGAGCCGGTAAAACAAGAGGTTGCTGTTGCCGACATTGGGCAGGTATaGCTCTGGACAGGGCATTCC +
Preference number: 4 (lower is better)
Translates to: CCCLLVFQEPVKQEVAVADIGQV*LWTGHS
Trigger: GGAATGCCCTGTCCAGAGGCATACCTGCCCAATGTC...GGCAACAGCAACCTCTTGTTTTACCGGCTCCTGAAAGACTAGCAAGCAGCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp ATAGCGTTTGGAATCCACCGGCACCACATCGATGGCCACATGGTACTGCTTCCCCATTCACTCTGCAAATaGCTGCAGCAGCTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: IAFGIHRHHIDGHMVLLPHSLCK*LQQLFS
Trigger: TGAGAAGAGCTGCTGCAGGCATTTGCAGAGTGAATG...GGGAAGCAGTACCATGTGGCCATCGATGTGGTGCCGGTGGATTCCAAACGCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625441.2
ENST00000626498.2
CDS-3UTR CCA 90 bp TGCTTCCCTGGATCCAACCCTTTCACCTTGACCCGAACAGAGGGGAACATCCGCGGAATGATGCACAAATaGTCTGTATTCCCAGCTACC +
Preference number: 4 (lower is better)
Translates to: CFPGSNPFTLTRTEGNIRGMMHK*SVFPAT
Trigger: GGTAGCTGGGAATACAGACCATTTGTGCATCATTCC...GCGGATGTTCCCCTCTGTTCGGGTCAAGGTGAAAGGGTTGGATCCAGGGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628739.2
CDS-3UTR TCA 90 bp ACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGCCATCTCATTGTTGGTaGGTTTCATGCGATCAAAGC +
Preference number: 4 (lower is better)
Translates to: TESGTGQHCCLALSRALGPSHCW*VSCDQS
Trigger: GCTTTGATCGCATGAAACTCACCAACAATGAGATGG...CCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR TCA 90 bp GAGTTTCATGCGATCAAAGCTGATGATCTGCCGCATCCAGGTCTCTCCCGAGCACGCTTTTTGAATTGGTaGCCCCCAGGGAAGATAACA +
Preference number: 4 (lower is better)
Translates to: EFHAIKADDLPHPGLSRARFLNW*PPGKIT
Trigger: TGTTATCTTCCCTGGGGGTCACCAATTCAAAAAGCG...TGCTCGGGAGAGACCTGGATGCGGCAGATCATCAGCTTTGATCGCATGAAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGCGTAGCCGCTGTCGCTaGCGCAGCCAGAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRRSRCR*RSQRKQ
Trigger: CTGCTTCCTCTGGCTGCGGCAGCGACAGCGGCTACG...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTCGTAGCCGCTGTCGCTaGCGCAGCCAGAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFRSRCR*RSQRKQ
Trigger: CTGCTTCCTCTGGCTGCGGCAGCGACAGCGGCTACG...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp CAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGGTTTGTACTTATGCTGGAGATGAGCCACTaGTTCCACTTTGTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: QVNTAALLYHVHSGFVLMLEMSH*FHFVCL
Trigger: CAGACACACAAAGTGGAAGCAGTGGCTCATCTCCAG...CATAAGTACAAACCCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp ATAGCGTTTGGAATCCACCGGCACCACATCGATGGCCACATGGTACTGCTTCCCAAAGGAGCAACTAAGTaGTTCTGGGGTGATGGAGTT +
Preference number: 4 (lower is better)
Translates to: IAFGIHRHHIDGHMVLLPKGATK*FWGDGV
Trigger: AACTCCATCACCCCAGAAGCACTTAGTTGCTCCTTT...GGGAAGCAGTACCATGTGGCCATCGATGTGGTGCCGGTGGATTCCAAACGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CCA 90 bp TTGGTGAGTTTCATGCGATCAAAGCTGATGATCTGCCGCATCCAGGTCTCTCCCCGTACCTATAGCGTTTaGAATCCACCGGCACCACAT +
Preference number: 4 (lower is better)
Translates to: LVSFMRSKLMICRIQVSPRTYSV*NPPAPH
Trigger: ATGTGGTGCCGGTGGATTCCAAACGCTATAGGTACG...GGGAGAGACCTGGATGCGGCAGATCATCAGCTTTGATCGCATGAAACTCACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CCA 90 bp GGACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGTAGATACTGATCACTaGAGTCTTCAGATGAACCGC +
Preference number: 4 (lower is better)
Translates to: GLNLGQVNTAALLYHVHSVDTDH*SLQMNR
Trigger: GCGGTTCATCTGAAGACTCCAGTGATCAGTATCTAC...CGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CCA 90 bp TTGGTGAGTTTCATGCGATCAAAGCTGATGATCTGCCGCATCCAGGTCTCTCCCGCAACTAAGTGCTTCTaGGGTGATGGAGTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: LVSFMRSKLMICRIQVSPATKCF*GDGVWQ
Trigger: CTGCCAAACTCCATCACCCCAGAAGCACTTAGTTGC...GGGAGAGACCTGGATGCGGCAGATCATCAGCTTTGATCGCATGAAACTCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
3UTR CAA 72 bp CAAGGACTGAATCTGGGACAGGTCAACACTGCTGCCTaGCTCTATCACGTGCACTCGGGGTTTGTACTTATG +
Preference number: 4 (lower is better)
Translates to: QGLNLGQVNTAA*LYHVHSGFVLM
Trigger: CATAAGTACAAACCCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR TCA 90 bp GAGTTTCATGCGATCAAAGCTGATGATCTGCCGCATCCAGGTCTCTCCCGAGCACCATCTCATTGTTGGTaGGTTTCATGCGATCAAAGC +
Preference number: 4 (lower is better)
Translates to: EFHAIKADDLPHPGLSRAPSHCW*VSCDQS
Trigger: GCTTTGATCGCATGAAACTCACCAACAATGAGATGG...TGCTCGGGAGAGACCTGGATGCGGCAGATCATCAGCTTTGATCGCATGAAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp TTCAAAGGAGAGGGGGCCCCTCCACTAGAGGTCACTGGAGATGAGCCACTGCTTTCCACTTTGTGTGTCTaGGCCAAAGGTTTTAAAATC +
Preference number: 4 (lower is better)
Translates to: FKGEGAPPLEVTGDEPLLSTLCV*AKGFKI
Trigger: GATTTTAAAACCTTTGGCGCAGACACACAAAGTGGA...AAGCAGTGGCTCATCTCCAGTGACCTCTAGTGGAGGGGCCCCCTCTCCTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp CTGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGGTTTGTAAAGACTGAGAACTGTTaGTGCTTGCTAGTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: LGQVNTAALLYHVHSGFVKTENC*CLLVFQ
Trigger: CTGAAAGACTAGCAAGCAGCAACAGTTCTCAGTCTT...TACAAACCCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CCA 90 bp GAGTTTCATGCGATCAAAGCTGATGATCTGCCGCATCCAGGTCTCTCCCGAGCACTGCTCCGCCTGTATTaGGTCTTGGAGTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: EFHAIKADDLPHPGLSRALLRLY*VLEFSF
Trigger: AAAAGAAAACTCCAAGACCCAATACAGGCGGAGCAG...TGCTCGGGAGAGACCTGGATGCGGCAGATCATCAGCTTTGATCGCATGAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625441.2
ENST00000626498.2
CDS-3UTR CCA 90 bp GAGTTTCATGCGATCAAAGCTGATGATCTGCCGCATCCAGGTCTCTCCCGAGCAGTAGATACTGATCACTaGAGTCTTCAGATGAACCGC +
Preference number: 4 (lower is better)
Translates to: EFHAIKADDLPHPGLSRAVDTDH*SLQMNR
Trigger: GCGGTTCATCTGAAGACTCCAGTGATCAGTATCTAC...TGCTCGGGAGAGACCTGGATGCGGCAGATCATCAGCTTTGATCGCATGAAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR TCA 90 bp TTCAAAGGAGAGGGGGCCCCTCCACTAGAGGTCACTGGAGATGAGCCACTGCTTTCTCCAAAAGAAACTTaGCTGTCGTCATTCACTTTA +
Preference number: 4 (lower is better)
Translates to: FKGEGAPPLEVTGDEPLLSPKET*LSSFTL
Trigger: TAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGA...AAGCAGTGGCTCATCTCCAGTGACCTCTAGTGGAGGGGCCCCCTCTCCTTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTCCCGCAGCTCAGGCTaGTCCGCCTGTATTGGGTCT +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRSRSSG*SACIGS
Trigger: AGACCCAATACAGGCGGAGCAGCCTGAGCTGCGGGA...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628957.2
CDS-3UTR GCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTTCCCGCAGCTCAGGCTaGTCCGCCTGTATTGGGTCT +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFSRSSG*SACIGS
Trigger: AGACCCAATACAGGCGGAGCAGCCTGAGCTGCGGGA...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628957.2
CDS-3UTR GCA 90 bp TGTTGCTGCTTGCTAGTCTTTCAGGAGCCGGTAAAACAAGAGGTTGCTGTTGCCCCTTGCTCTATCACGTaGACTCGGGGTTTGTACTTA +
Preference number: 4 (lower is better)
Translates to: CCCLLVFQEPVKQEVAVAPCSIT*TRGLYL
Trigger: TAAGTACAAACCCCGAGTGCACGTGATAGAGCAAGG...GGCAACAGCAACCTCTTGTTTTACCGGCTCCTGAAAGACTAGCAAGCAGCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp CAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGGTTTGTACTTATGAAAGGAGCAACTAAGTaGTTCTGGGGTGATGGAGTT +
Preference number: 4 (lower is better)
Translates to: QVNTAALLYHVHSGFVLMKGATK*FWGDGV
Trigger: AACTCCATCACCCCAGAAGCACTTAGTTGCTCCTTT...CATAAGTACAAACCCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR TCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTCTCTCCCGAGCAGGGTaGGTCCGGGTGAACATAGAA +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFLSRAG*VRVNIE
Trigger: TTCTATGTTCACCCGGACTCACCCTGCTCGGGAGAG...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR TCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGCTCTCCCGAGCAGGGTaGGTCCGGGTGAACATAGAA +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRLSRAG*VRVNIE
Trigger: TTCTATGTTCACCCGGACTCACCCTGCTCGGGAGAG...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR TCA 90 bp CAACTAAGTGCTTCTGGGGTGATGGAGTTTGGCAGAAAAATATTTCCAGGTGACTCAGTGGGCAAGGACTaGATCTGGGACAGGTCAACA +
Preference number: 4 (lower is better)
Translates to: QLSASGVMEFGRKIFPGDSVGKD*IWDRST
Trigger: TGTTGACCTGTCCCAGATTCAGTCCTTGCCCACTGA...GTCACCTGGAAATATTTTTCTGCCAAACTCCATCACCCCAGAAGCACTTAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR TCA 90 bp TGTTGCTGCTTGCTAGTCTTTCAGGAGCCGGTAAAACAAGAGGTTGCTGTTGCCGGTGCTTGTAGATACTaGTCACTGGAGTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: CCCLLVFQEPVKQEVAVAGACRY*SLESSD
Trigger: ATCTGAAGACTCCAGTGATCAGTATCTACAAGCACC...GGCAACAGCAACCTCTTGTTTTACCGGCTCCTGAAAGACTAGCAAGCAGCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR TCA 90 bp GGGTTTGTACTTATGCATGGATTGCAGAATGATGTGGCCTTTGTCATCCATCTCCCAGCCCAGTGGTTCTaGAGTCAAGTCTCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: GFVLMHGLQNDVAFVIHLPAQWF*SQVSVR
Trigger: TCTGACTGAGACTTGACTTCAGAACCACTGGGCTGG...GAGATGGATGACAAAGGCCACATCATTCTGCAATCCATGCATAAGTACAAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000625441.2
ENST00000626498.2
CDS-3UTR GCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTGACTTTCAGAGCTGTTaGCGTAGCCGCTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFDFQSC*RSRCRC
Trigger: GCAGCGACAGCGGCTACGGCAACAGCTCTGAAAGTC...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGGACTTTCAGAGCTGTTaGCGTAGCCGCTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRDFQSC*RSRCRC
Trigger: GCAGCGACAGCGGCTACGGCAACAGCTCTGAAAGTC...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp CAACTAAGTGCTTCTGGGGTGATGGAGTTTGGCAGAAAAATATTTCCAGGTGACATGGCCACATGGTACTaGTTCCCTGGATCCAACCCT +
Preference number: 4 (lower is better)
Translates to: QLSASGVMEFGRKIFPGDMATWY*FPGSNP
Trigger: AGGGTTGGATCCAGGGAAGCAGTACCATGTGGCCAT...GTCACCTGGAAATATTTTTCTGCCAAACTCCATCACCCCAGAAGCACTTAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp GGGTTTGTACTTATGCATGGATTGCAGAATGATGTGGCCTTTGTCATCCATCTCTCAAAGCTGATGATCTaGCGCATCCAGGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GFVLMHGLQNDVAFVIHLSKLMI*RIQVSP
Trigger: GGGAGAGACCTGGATGCGGCAGATCATCAGCTTTGA...GAGATGGATGACAAAGGCCACATCATTCTGCAATCCATGCATAAGTACAAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp GGGTTTGTACTTATGCATGGATTGCAGAATGATGTGGCCTTTGTCATCCATCTCTCAACACTGCTGCCTTaGTCTATCACGTGCACTCGG +
Preference number: 4 (lower is better)
Translates to: GFVLMHGLQNDVAFVIHLSTLLP*SITCTR
Trigger: CCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGA...GAGATGGATGACAAAGGCCACATCATTCTGCAATCCATGCATAAGTACAAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp GAGTTTCATGCGATCAAAGCTGATGATCTGCCGCATCCAGGTCTCTCCCGAGCATCCACTTTGTGTGTCTaGGCCAAAGGTTTTAAAATC +
Preference number: 4 (lower is better)
Translates to: EFHAIKADDLPHPGLSRASTLCV*AKGFKI
Trigger: GATTTTAAAACCTTTGGCGCAGACACACAAAGTGGA...TGCTCGGGAGAGACCTGGATGCGGCAGATCATCAGCTTTGATCGCATGAAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp ACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGACAAGAGGTTGCTGTTaGCAAAAATTAGTTGGACAA +
Preference number: 4 (lower is better)
Translates to: TESGTGQHCCLALSRALGTRGCC*QKLVGQ
Trigger: TTGTCCAACTAATTTTTGGCAACAGCAACCTCTTGT...CCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp CAACTAAGTGCTTCTGGGGTGATGGAGTTTGGCAGAAAAATATTTCCAGGTGACCAAGAAGCAGTGTGTTaGTGTGTCAAGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QLSASGVMEFGRKIFPGDQEAVC*CVKRPG
Trigger: GCCTGGCCTCTTGACACAGCAACACACTGCTTCTTG...GTCACCTGGAAATATTTTTCTGCCAAACTCCATCACCCCAGAAGCACTTAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000625441.2
ENST00000626498.2
CDS-3UTR CCA 90 bp TGCTTGCTAGTCTTTCAGGAGCCGGTAAAACAAGAGGTTGCTGTTGCCAAAAATACATCGATGGCCACATaGTACTGCTTCCCTGGATCC +
Preference number: 4 (lower is better)
Translates to: CLLVFQEPVKQEVAVAKNTSMAT*YCFPGS
Trigger: GGATCCAGGGAAGCAGTACCATGTGGCCATCGATGT...ATTTTTGGCAACAGCAACCTCTTGTTTTACCGGCTCCTGAAAGACTAGCAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTCCGGCACCACATCGATaGCCACATGGTACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFPAPHR*PHGTAS
Trigger: GGAAGCAGTACCATGTGGCCATCGATGTGGTGCCGG...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGCCGGCACCACATCGATaGCCACATGGTACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRPAPHR*PHGTAS
Trigger: GGAAGCAGTACCATGTGGCCATCGATGTGGTGCCGG...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGGGGCAGGTATGCCTCTaGACAGGGCATTCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRGQVCL*TGHSKG
Trigger: TCCCTTGGAATGCCCTGTCCAGAGGCATACCTGCCC...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTGGGCAGGTATGCCTCTaGACAGGGCATTCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFGQVCL*TGHSKG
Trigger: TCCCTTGGAATGCCCTGTCCAGAGGCATACCTGCCC...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR TCA 90 bp GGGTTTGTACTTATGCATGGATTGCAGAATGATGTGGCCTTTGTCATCCATCTCAGTGGGGCTAAAGACTaGGAACTGTTGCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: GFVLMHGLQNDVAFVIHLSGAKD*ELLLLA
Trigger: AGCAAGCAGCAACAGTTCTCAGTCTTTAGCCCCACT...GAGATGGATGACAAAGGCCACATCATTCTGCAATCCATGCATAAGTACAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR TCA 90 bp GAGTTTCATGCGATCAAAGCTGATGATCTGCCGCATCCAGGTCTCTCCCGAGCATCTCCAAAAGAAACTTaGCTGTCGTCATTCACTTTA +
Preference number: 4 (lower is better)
Translates to: EFHAIKADDLPHPGLSRASPKET*LSSFTL
Trigger: TAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGA...TGCTCGGGAGAGACCTGGATGCGGCAGATCATCAGCTTTGATCGCATGAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTTCTTCCCTGCAGCGCTaGTCCTTCTCTCCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFSSLQR*SFSPPL
Trigger: AAGAGGAGGAGAGAAGGAGCAGCGCTGCAGGGAAGA...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628957.2
CDS-3UTR GCA 90 bp GGGTTTGTACTTATGCATGGATTGCAGAATGATGTGGCCTTTGTCATCCATCTCACAGGTCAACACTGCTaGCTTGCTCTATCACGTGCA +
Preference number: 4 (lower is better)
Translates to: GFVLMHGLQNDVAFVIHLTGQHC*LALSRA
Trigger: TGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGT...GAGATGGATGACAAAGGCCACATCATTCTGCAATCCATGCATAAGTACAAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp CAACTAAGTGCTTCTGGGGTGATGGAGTTTGGCAGAAAAATATTTCCAGGTGACCTGGAGATGAGCCACTaGTTCCACTTTGTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: QLSASGVMEFGRKIFPGDLEMSH*FHFVCL
Trigger: CAGACACACAAAGTGGAAGCAGTGGCTCATCTCCAG...GTCACCTGGAAATATTTTTCTGCCAAACTCCATCACCCCAGAAGCACTTAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTGACATTGGGCAGGTATaGCTCTGGACAGGGCATTCC +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFDIGQV*LWTGHS
Trigger: GGAATGCCCTGTCCAGAGGCATACCTGCCCAATGTC...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGGACATTGGGCAGGTATaGCTCTGGACAGGGCATTCC +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRDIGQV*LWTGHS
Trigger: GGAATGCCCTGTCCAGAGGCATACCTGCCCAATGTC...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp ACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGGGTAAAACAAGAGGTTaGTGTTGCCAAAAATTAGTT +
Preference number: 4 (lower is better)
Translates to: TESGTGQHCCLALSRALGGKTRG*CCQKLV
Trigger: AACTAATTTTTGGCAACAGCAACCTCTTGTTTTACC...CCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp TGTTGCTGCTTGCTAGTCTTTCAGGAGCCGGTAAAACAAGAGGTTGCTGTTGCCAAGACTGAGAACTGTTaGTGCTTGCTAGTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: CCCLLVFQEPVKQEVAVAKTENC*CLLVFQ
Trigger: CTGAAAGACTAGCAAGCAGCAACAGTTCTCAGTCTT...GGCAACAGCAACCTCTTGTTTTACCGGCTCCTGAAAGACTAGCAAGCAGCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CCA 90 bp GGGTTTGTACTTATGCATGGATTGCAGAATGATGTGGCCTTTGTCATCCATCTCGCAACTAAGTGCTTCTaGGGTGATGGAGTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GFVLMHGLQNDVAFVIHLATKCF*GDGVWQ
Trigger: CTGCCAAACTCCATCACCCCAGAAGCACTTAGTTGC...GAGATGGATGACAAAGGCCACATCATTCTGCAATCCATGCATAAGTACAAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CCA 90 bp GGACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGTCATTCACTTTAAGATaGTTGGAACCACTTATCAGT +
Preference number: 4 (lower is better)
Translates to: GLNLGQVNTAALLYHVHSSFTLR*LEPLIS
Trigger: ACTGATAAGTGGTTCCAACCATCTTAAAGTGAATGA...CGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTGCTCAGAGCCATCCCTaGAAGGCAAGAAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFAQSHP*KARSSV
Trigger: CACACTGCTTCTTGCCTTCCAGGGATGGCTCTGAGC...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
CDS-3UTR CCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGGCTCAGAGCCATCCCTaGAAGGCAAGAAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRAQSHP*KARSSV
Trigger: CACACTGCTTCTTGCCTTCCAGGGATGGCTCTGAGC...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
CDS-3UTR TCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTTCAGTGGGCAAGGACTaGATCTGGGACAGGTCAACA +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFSVGKD*IWDRST
Trigger: TGTTGACCTGTCCCAGATTCAGTCCTTGCCCACTGA...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR TCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTCAGTGGGCAAGGACTaGATCTGGGACAGGTCAACA +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRSVGKD*IWDRST
Trigger: TGTTGACCTGTCCCAGATTCAGTCCTTGCCCACTGA...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR TCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGAGAGGTCACTGGAGATaGGCCACTGCTTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRRGHWR*ATASTL
Trigger: CAAAGTGGAAGCAGTGGCTCATCTCCAGTGACCTCT...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR TCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTAGAGGTCACTGGAGATaGGCCACTGCTTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFRGHWR*ATASTL
Trigger: CAAAGTGGAAGCAGTGGCTCATCTCCAGTGACCTCT...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR TCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTAGCATAGAGGCAGGTTaGCATTGGGCAGGTATGCCT +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFSIEAG*HWAGMP
Trigger: AGGCATACCTGCCCAATGTCAACCTGCCTCTATGCT...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR TCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGAGCATAGAGGCAGGTTaGCATTGGGCAGGTATGCCT +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRSIEAG*HWAGMP
Trigger: AGGCATACCTGCCCAATGTCAACCTGCCTCTATGCT...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR TCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGCCAGCCCAGTGGTTCTaGAGTCAAGTCTCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRPAQWF*SQVSVR
Trigger: TCTGACTGAGACTTGACTTCAGAACCACTGGGCTGG...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
CDS-3UTR TCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTCCAGCCCAGTGGTTCTaGAGTCAAGTCTCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFPAQWF*SQVSVR
Trigger: TCTGACTGAGACTTGACTTCAGAACCACTGGGCTGG...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
CDS-3UTR GCA 90 bp AAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGGACTTTCAGAGCTGTTaGCGTAGCCGCTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: KRNLTVVIHFKMVGTTYQDFQSC*RSRCRC
Trigger: GCAGCGACAGCGGCTACGGCAACAGCTCTGAAAGTC...CTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGATGGCCACATGGTACTaGTTCCCTGGATCCAACCCT +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRMATWY*FPGSNP
Trigger: AGGGTTGGATCCAGGGAAGCAGTACCATGTGGCCAT...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTATGGCCACATGGTACTaGTTCCCTGGATCCAACCCT +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFMATWY*FPGSNP
Trigger: AGGGTTGGATCCAGGGAAGCAGTACCATGTGGCCAT...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTTCAAAGCTGATGATCTaGCGCATCCAGGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFSKLMI*RIQVSP
Trigger: GGGAGAGACCTGGATGCGGCAGATCATCAGCTTTGA...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTCAAAGCTGATGATCTaGCGCATCCAGGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRSKLMI*RIQVSP
Trigger: GGGAGAGACCTGGATGCGGCAGATCATCAGCTTTGA...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTGGGACAGGTCAACACTaGTGCCTTGCTCTATCACGT +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFGTGQH*CLALSR
Trigger: ACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCC...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGGGGACAGGTCAACACTaGTGCCTTGCTCTATCACGT +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRGTGQH*CLALSR
Trigger: ACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCC...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp ACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATGGGACAGGTCAACACTaGTGCCTTGCTCTATCACGT +
Preference number: 4 (lower is better)
Translates to: TVVIHFKMVGTTYQSRWHGTGQH*CLALSR
Trigger: ACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCC...ATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGCAAGAAGCAGTGTGTTaGTGTGTCAAGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRQEAVC*CVKRPG
Trigger: GCCTGGCCTCTTGACACAGCAACACACTGCTTCTTG...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
CDS-3UTR GCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTCAAGAAGCAGTGTGTTaGTGTGTCAAGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFQEAVC*CVKRPG
Trigger: GCCTGGCCTCTTGACACAGCAACACACTGCTTCTTG...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
CDS-3UTR CCA 90 bp GGGTTTGTACTTATGCATGGATTGCAGAATGATGTGGCCTTTGTCATCCATCTCATGGTACTGCTTCCCTaGATCCAACCCTTTCACCTT +
Preference number: 4 (lower is better)
Translates to: GFVLMHGLQNDVAFVIHLMVLLP*IQPFHL
Trigger: AAGGTGAAAGGGTTGGATCCAGGGAAGCAGTACCAT...GAGATGGATGACAAAGGCCACATCATTCTGCAATCCATGCATAAGTACAAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CCA 90 bp CAACTAAGTGCTTCTGGGGTGATGGAGTTTGGCAGAAAAATATTTCCAGGTGACATGGTACTGCTTCCCTaGATCCAACCCTTTCACCTT +
Preference number: 4 (lower is better)
Translates to: QLSASGVMEFGRKIFPGDMVLLP*IQPFHL
Trigger: AAGGTGAAAGGGTTGGATCCAGGGAAGCAGTACCAT...GTCACCTGGAAATATTTTTCTGCCAAACTCCATCACCCCAGAAGCACTTAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTACATCGATGGCCACATaGTACTGCTTCCCTGGATCC +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFTSMAT*YCFPGS
Trigger: GGATCCAGGGAAGCAGTACCATGTGGCCATCGATGT...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGACATCGATGGCCACATaGTACTGCTTCCCTGGATCC +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRTSMAT*YCFPGS
Trigger: GGATCCAGGGAAGCAGTACCATGTGGCCATCGATGT...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CCA 90 bp TTGCTGGATACCAATGAACATGATTACATTTGCCTTCTCCAAAAGAAACTTGACCCGGCACCACATCGATaGCCACATGGTACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LLDTNEHDYICLLQKKLDPAPHR*PHGTAS
Trigger: GGAAGCAGTACCATGTGGCCATCGATGTGGTGCCGG...GTCAAGTTTCTTTTGGAGAAGGCAAATGTAATCATGTTCATTGGTATCCAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CCA 90 bp TTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGTTGGAGCTCAGAGCCATCCCTaGAAGGCAAGAAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: FAFSKRNLTVVIHFKMVGAQSHP*KARSSV
Trigger: CACACTGCTTCTTGCCTTCCAGGGATGGCTCTGAGC...TCCAACCATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625441.2
ENST00000626498.2
CDS-3UTR TCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTAGAGGAAGCAGATGTTaGGGGCTCTGTCTTAGGTTG +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFRGSRC*GLCLRL
Trigger: CAACCTAAGACAGAGCCCTCAACATCTGCTTCCTCT...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628957.2
CDS-3UTR TCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGAGAGGAAGCAGATGTTaGGGGCTCTGTCTTAGGTTG +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRRGSRC*GLCLRL
Trigger: CAACCTAAGACAGAGCCCTCAACATCTGCTTCCTCT...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628957.2
CDS-3UTR TCA 90 bp ACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATAGAGGAAGCAGATGTTaGGGGCTCTGTCTTAGGTTG +
Preference number: 4 (lower is better)
Translates to: TVVIHFKMVGTTYQSRWHRGSRC*GLCLRL
Trigger: CAACCTAAGACAGAGCCCTCAACATCTGCTTCCTCT...ATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625441.2
ENST00000626498.2
CDS-3UTR TCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTAGCTACCATCCACTGTaGGCTGTGATAGACGTACCT +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFSYHPL*AVIDVP
Trigger: AGGTACGTCTATCACAGCTCACAGTGGATGGTAGCT...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR TCA 90 bp TGCTTGCTAGTCTTTCAGGAGCCGGTAAAACAAGAGGTTGCTGTTGCCAAAAATCCATCTCATTGTTGGTaGGTTTCATGCGATCAAAGC +
Preference number: 4 (lower is better)
Translates to: CLLVFQEPVKQEVAVAKNPSHCW*VSCDQS
Trigger: GCTTTGATCGCATGAAACTCACCAACAATGAGATGG...ATTTTTGGCAACAGCAACCTCTTGTTTTACCGGCTCCTGAAAGACTAGCAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR TCA 90 bp TTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGTTGGAAGAGGTCACTGGAGATaGGCCACTGCTTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: FAFSKRNLTVVIHFKMVGRGHWR*ATASTL
Trigger: CAAAGTGGAAGCAGTGGCTCATCTCCAGTGACCTCT...TCCAACCATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR TCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGAGTGGGGCTAAAGACTaGGAACTGTTGCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRSGAKD*ELLLLA
Trigger: AGCAAGCAGCAACAGTTCTCAGTCTTTAGCCCCACT...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR TCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTAGTGGGGCTAAAGACTaGGAACTGTTGCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFSGAKD*ELLLLA
Trigger: AGCAAGCAGCAACAGTTCTCAGTCTTTAGCCCCACT...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGACAGGTCAACACTGCTaGCTTGCTCTATCACGTGCA +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRTGQHC*LALSRA
Trigger: TGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGT...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTACAGGTCAACACTGCTaGCTTGCTCTATCACGTGCA +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFTGQHC*LALSRA
Trigger: TGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGT...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGCTGGAGATGAGCCACTaGTTCCACTTTGTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRLEMSH*FHFVCL
Trigger: CAGACACACAAAGTGGAAGCAGTGGCTCATCTCCAG...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTCTGGAGATGAGCCACTaGTTCCACTTTGTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFLEMSH*FHFVCL
Trigger: CAGACACACAAAGTGGAAGCAGTGGCTCATCTCCAG...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp TGTTGCTGCTTGCTAGTCTTTCAGGAGCCGGTAAAACAAGAGGTTGCTGTTGCCACAAGAGGTTGCTGTTaGCAAAAATTAGTTGGACAA +
Preference number: 4 (lower is better)
Translates to: CCCLLVFQEPVKQEVAVATRGCC*QKLVGQ
Trigger: TTGTCCAACTAATTTTTGGCAACAGCAACCTCTTGT...GGCAACAGCAACCTCTTGTTTTACCGGCTCCTGAAAGACTAGCAAGCAGCAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTCACTCTGCAAATGCCTaGAGCAGCTCTTCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFHSANA*SSSSQE
Trigger: CTCTTGAGAAGAGCTGCTGCAGGCATTTGCAGAGTG...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
CDS-3UTR GCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGCACTCTGCAAATGCCTaGAGCAGCTCTTCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRHSANA*SSSSQE
Trigger: CTCTTGAGAAGAGCTGCTGCAGGCATTTGCAGAGTG...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
CDS-3UTR GCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTAGAGCTCATTCACTCTaGAAATGCCTGCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFRAHSL*KCLQQL
Trigger: GAGCTGCTGCAGGCATTTGCAGAGTGAATGAGCTCT...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
CDS-3UTR GCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGAGAGCTCATTCACTCTaGAAATGCCTGCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRRAHSL*KCLQQL
Trigger: GAGCTGCTGCAGGCATTTGCAGAGTGAATGAGCTCT...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
CDS-3UTR CCA 90 bp ATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATAGAGAAATTCCGGCACCACATCGATaGCCACATGGTACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: IHFKMVGTTYQSRWHREIPAPHR*PHGTAS
Trigger: GGAAGCAGTACCATGTGGCCATCGATGTGGTGCCGG...AATTTCTCTATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CCA 90 bp ATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATAGAGAAATTGGGCAGGTATGCCTCTaGACAGGGCATTCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: IHFKMVGTTYQSRWHREIGQVCL*TGHSKG
Trigger: TCCCTTGGAATGCCCTGTCCAGAGGCATACCTGCCC...AATTTCTCTATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGGCAACTAAGTGCTTCTaGGGTGATGGAGTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRATKCF*GDGVWQ
Trigger: CTGCCAAACTCCATCACCCCAGAAGCACTTAGTTGC...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTGCAACTAAGTGCTTCTaGGGTGATGGAGTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFATKCF*GDGVWQ
Trigger: CTGCCAAACTCCATCACCCCAGAAGCACTTAGTTGC...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CCA 90 bp TTGCTGGATACCAATGAACATGATTACATTTGCCTTCTCCAAAAGAAACTTGACGCTCAGAGCCATCCCTaGAAGGCAAGAAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: LLDTNEHDYICLLQKKLDAQSHP*KARSSV
Trigger: CACACTGCTTCTTGCCTTCCAGGGATGGCTCTGAGC...GTCAAGTTTCTTTTGGAGAAGGCAAATGTAATCATGTTCATTGGTATCCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625441.2
ENST00000626498.2
CDS-3UTR TCA 90 bp TTGCTGGATACCAATGAACATGATTACATTTGCCTTCTCCAAAAGAAACTTGACTCAGTGGGCAAGGACTaGATCTGGGACAGGTCAACA +
Preference number: 4 (lower is better)
Translates to: LLDTNEHDYICLLQKKLDSVGKD*IWDRST
Trigger: TGTTGACCTGTCCCAGATTCAGTCCTTGCCCACTGA...GTCAAGTTTCTTTTGGAGAAGGCAAATGTAATCATGTTCATTGGTATCCAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR TCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGCGCTTTTTGAATTGGTaGCCCCCAGGGAAGATAACA +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRRFLNW*PPGKIT
Trigger: TGTTATCTTCCCTGGGGGTCACCAATTCAAAAAGCG...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp AAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGTCAAAGCTGATGATCTaGCGCATCCAGGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: KRNLTVVIHFKMVGTTYQSKLMI*RIQVSP
Trigger: GGGAGAGACCTGGATGCGGCAGATCATCAGCTTTGA...CTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTCCTTGCTCTATCACGTaGACTCGGGGTTTGTACTTA +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFPCSIT*TRGLYL
Trigger: TAAGTACAAACCCCGAGTGCACGTGATAGAGCAAGG...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGCCTTGCTCTATCACGTaGACTCGGGGTTTGTACTTA +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRPCSIT*TRGLYL
Trigger: TAAGTACAAACCCCGAGTGCACGTGATAGAGCAAGG...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp TTGCTGGATACCAATGAACATGATTACATTTGCCTTCTCCAAAAGAAACTTGACGGGACAGGTCAACACTaGTGCCTTGCTCTATCACGT +
Preference number: 4 (lower is better)
Translates to: LLDTNEHDYICLLQKKLDGTGQH*CLALSR
Trigger: ACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCC...GTCAAGTTTCTTTTGGAGAAGGCAAATGTAATCATGTTCATTGGTATCCAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp ATTACATTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGACATTGGGCAGGTATaGCTCTGGACAGGGCATTCC +
Preference number: 4 (lower is better)
Translates to: ITFAFSKRNLTVVIHFKMDIGQV*LWTGHS
Trigger: GGAATGCCCTGTCCAGAGGCATACCTGCCCAATGTC...CATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAATGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp GGGTTTGTACTTATGCATGGATTGCAGAATGATGTGGCCTTTGTCATCCATCTCAAGACTGAGAACTGTTaGTGCTTGCTAGTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: GFVLMHGLQNDVAFVIHLKTENC*CLLVFQ
Trigger: CTGAAAGACTAGCAAGCAGCAACAGTTCTCAGTCTT...GAGATGGATGACAAAGGCCACATCATTCTGCAATCCATGCATAAGTACAAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGCATTCACTCTGCAAATaGCTGCAGCAGCTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRHSLCK*LQQLFS
Trigger: TGAGAAGAGCTGCTGCAGGCATTTGCAGAGTGAATG...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
CDS-3UTR GCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTCATTCACTCTGCAAATaGCTGCAGCAGCTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFHSLCK*LQQLFS
Trigger: TGAGAAGAGCTGCTGCAGGCATTTGCAGAGTGAATG...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
CDS-3UTR CCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGATGGTACTGCTTCCCTaGATCCAACCCTTTCACCTT +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRMVLLP*IQPFHL
Trigger: AAGGTGAAAGGGTTGGATCCAGGGAAGCAGTACCAT...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR TCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTCCATCTCATTGTTGGTaGGTTTCATGCGATCAAAGC +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFPSHCW*VSCDQS
Trigger: GCTTTGATCGCATGAAACTCACCAACAATGAGATGG...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR TCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTGGTGCTTGTAGATACTaGTCACTGGAGTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFGACRY*SLESSD
Trigger: ATCTGAAGACTCCAGTGATCAGTATCTACAAGCACC...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR TCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGGGTGCTTGTAGATACTaGTCACTGGAGTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRGACRY*SLESSD
Trigger: ATCTGAAGACTCCAGTGATCAGTATCTACAAGCACC...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR TCA 90 bp GGGTTTGTACTTATGCATGGATTGCAGAATGATGTGGCCTTTGTCATCCATCTCGCTTCACTGCTTTCATaGGAATTACATCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: GFVLMHGLQNDVAFVIHLASLLS*ELHPSS
Trigger: AGAAGATGGATGTAATTCTCATGAAAGCAGTGAAGC...GAGATGGATGACAAAGGCCACATCATTCTGCAATCCATGCATAAGTACAAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628739.2
CDS-3UTR GCA 90 bp ATTACATTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGATGGCCACATGGTACTaGTTCCCTGGATCCAACCCT +
Preference number: 4 (lower is better)
Translates to: ITFAFSKRNLTVVIHFKMMATWY*FPGSNP
Trigger: AGGGTTGGATCCAGGGAAGCAGTACCATGTGGCCAT...CATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAATGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTAAAGGAGCAACTAAGTaGTTCTGGGGTGATGGAGTT +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFKGATK*FWGDGV
Trigger: AACTCCATCACCCCAGAAGCACTTAGTTGCTCCTTT...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGAAAGGAGCAACTAAGTaGTTCTGGGGTGATGGAGTT +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRKGATK*FWGDGV
Trigger: AACTCCATCACCCCAGAAGCACTTAGTTGCTCCTTT...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTCTGCTCCGCCTGTATTaGGTCTTGGAGTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFLLRLY*VLEFSF
Trigger: AAAAGAAAACTCCAAGACCCAATACAGGCGGAGCAG...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628957.2
CDS-3UTR CCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGCTGCTCCGCCTGTATTaGGTCTTGGAGTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRLLRLY*VLEFSF
Trigger: AAAAGAAAACTCCAAGACCCAATACAGGCGGAGCAG...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628957.2
CDS-3UTR CCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTGGAATGATGCACAAATaGTCTGTATTCCCAGCTACC +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFGMMHK*SVFPAT
Trigger: GGTAGCTGGGAATACAGACCATTTGTGCATCATTCC...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGGGAATGATGCACAAATaGTCTGTATTCCCAGCTACC +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRGMMHK*SVFPAT
Trigger: GGTAGCTGGGAATACAGACCATTTGTGCATCATTCC...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTGTAGATACTGATCACTaGAGTCTTCAGATGAACCGC +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFVDTDH*SLQMNR
Trigger: GCGGTTCATCTGAAGACTCCAGTGATCAGTATCTAC...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGGTAGATACTGATCACTaGAGTCTTCAGATGAACCGC +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRVDTDH*SLQMNR
Trigger: GCGGTTCATCTGAAGACTCCAGTGATCAGTATCTAC...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR TCA 90 bp TTGCTGGATACCAATGAACATGATTACATTTGCCTTCTCCAAAAGAAACTTGACCGCTTTTTGAATTGGTaGCCCCCAGGGAAGATAACA +
Preference number: 4 (lower is better)
Translates to: LLDTNEHDYICLLQKKLDRFLNW*PPGKIT
Trigger: TGTTATCTTCCCTGGGGGTCACCAATTCAAAAAGCG...GTCAAGTTTCTTTTGGAGAAGGCAAATGTAATCATGTTCATTGGTATCCAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR TCA 90 bp TTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGTTGGAGGTGCTTGTAGATACTaGTCACTGGAGTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: FAFSKRNLTVVIHFKMVGGACRY*SLESSD
Trigger: ATCTGAAGACTCCAGTGATCAGTATCTACAAGCACC...TCCAACCATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR TCA 90 bp GGGTTTGTACTTATGCATGGATTGCAGAATGATGTGGCCTTTGTCATCCATCTCTCTCCAAAAGAAACTTaGCTGTCGTCATTCACTTTA +
Preference number: 4 (lower is better)
Translates to: GFVLMHGLQNDVAFVIHLSPKET*LSSFTL
Trigger: TAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGA...GAGATGGATGACAAAGGCCACATCATTCTGCAATCCATGCATAAGTACAAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp ATTACATTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGACAGGTCAACACTGCTaGCTTGCTCTATCACGTGCA +
Preference number: 4 (lower is better)
Translates to: ITFAFSKRNLTVVIHFKMTGQHC*LALSRA
Trigger: TGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGT...CATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAATGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGAAGACTGAGAACTGTTaGTGCTTGCTAGTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRKTENC*CLLVFQ
Trigger: CTGAAAGACTAGCAAGCAGCAACAGTTCTCAGTCTT...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp ATTACATTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGCACTCTGCAAATGCCTaGAGCAGCTCTTCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: ITFAFSKRNLTVVIHFKMHSANA*SSSSQE
Trigger: CTCTTGAGAAGAGCTGCTGCAGGCATTTGCAGAGTG...CATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAATGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625441.2
ENST00000626498.2
CDS-3UTR GCA 90 bp ATTACATTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGAGAGCTCATTCACTCTaGAAATGCCTGCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: ITFAFSKRNLTVVIHFKMRAHSL*KCLQQL
Trigger: GAGCTGCTGCAGGCATTTGCAGAGTGAATGAGCTCT...CATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAATGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625441.2
ENST00000626498.2
CDS-3UTR CCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTTCAGTCCCGATGTCATaGAATCTTTTCCACAGTTCA +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFSVPMS*NLFHSS
Trigger: TGAACTGTGGAAAAGATTCCATGACATCGGGACTGA...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CCA 90 bp TTGCTGGATACCAATGAACATGATTACATTTGCCTTCTCCAAAAGAAACTTGACATGGTACTGCTTCCCTaGATCCAACCCTTTCACCTT +
Preference number: 4 (lower is better)
Translates to: LLDTNEHDYICLLQKKLDMVLLP*IQPFHL
Trigger: AAGGTGAAAGGGTTGGATCCAGGGAAGCAGTACCAT...GTCAAGTTTCTTTTGGAGAAGGCAAATGTAATCATGTTCATTGGTATCCAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CCA 90 bp ATTACATTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGCGTACCTATAGCGTTTaGAATCCACCGGCACCACAT +
Preference number: 4 (lower is better)
Translates to: ITFAFSKRNLTVVIHFKMRTYSV*NPPAPH
Trigger: ATGTGGTGCCGGTGGATTCCAAACGCTATAGGTACG...CATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAATGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CCA 90 bp TTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGTTGGAGGAATGATGCACAAATaGTCTGTATTCCCAGCTACC +
Preference number: 4 (lower is better)
Translates to: FAFSKRNLTVVIHFKMVGGMMHK*SVFPAT
Trigger: GGTAGCTGGGAATACAGACCATTTGTGCATCATTCC...TCCAACCATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR TCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGGCTTCACTGCTTTCATaGGAATTACATCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRASLLS*ELHPSS
Trigger: AGAAGATGGATGTAATTCTCATGAAAGCAGTGAAGC...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTTCCACTTTGTGTGTCTaGGCCAAAGGTTTTAAAATC +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFSTLCV*AKGFKI
Trigger: GATTTTAAAACCTTTGGCGCAGACACACAAAGTGGA...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTCCACTTTGTGTGTCTaGGCCAAAGGTTTTAAAATC +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRSTLCV*AKGFKI
Trigger: GATTTTAAAACCTTTGGCGCAGACACACAAAGTGGA...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp ACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATTCCACTTTGTGTGTCTaGGCCAAAGGTTTTAAAATC +
Preference number: 4 (lower is better)
Translates to: TVVIHFKMVGTTYQSRWHSTLCV*AKGFKI
Trigger: GATTTTAAAACCTTTGGCGCAGACACACAAAGTGGA...ATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp TGCTTGCTAGTCTTTCAGGAGCCGGTAAAACAAGAGGTTGCTGTTGCCAAAAATGGTAAAACAAGAGGTTaGTGTTGCCAAAAATTAGTT +
Preference number: 4 (lower is better)
Translates to: CLLVFQEPVKQEVAVAKNGKTRG*CCQKLV
Trigger: AACTAATTTTTGGCAACAGCAACCTCTTGTTTTACC...ATTTTTGGCAACAGCAACCTCTTGTTTTACCGGCTCCTGAAAGACTAGCAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CCA 90 bp TTGCTGGATACCAATGAACATGATTACATTTGCCTTCTCCAAAAGAAACTTGACCTGCTCCGCCTGTATTaGGTCTTGGAGTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LLDTNEHDYICLLQKKLDLLRLY*VLEFSF
Trigger: AAAAGAAAACTCCAAGACCCAATACAGGCGGAGCAG...GTCAAGTTTCTTTTGGAGAAGGCAAATGTAATCATGTTCATTGGTATCCAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000625441.2
ENST00000626498.2
CDS-3UTR CCA 90 bp TGCTTGCTAGTCTTTCAGGAGCCGGTAAAACAAGAGGTTGCTGTTGCCAAAAATTCATTCACTTTAAGATaGTTGGAACCACTTATCAGT +
Preference number: 4 (lower is better)
Translates to: CLLVFQEPVKQEVAVAKNSFTLR*LEPLIS
Trigger: ACTGATAAGTGGTTCCAACCATCTTAAAGTGAATGA...ATTTTTGGCAACAGCAACCTCTTGTTTTACCGGCTCCTGAAAGACTAGCAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR TCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTTCTCCAAAAGAAACTTaGCTGTCGTCATTCACTTTA +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFSPKET*LSSFTL
Trigger: TAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGA...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR TCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGATGCAGTTAACGTGGTaGACTAGCTTCAGTATAATT +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRMQLTW*TSFSII
Trigger: AATTATACTGAAGCTAGTTCACCACGTTAACTGCAT...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGACAAGAGGTTGCTGTTaGCAAAAATTAGTTGGACAA +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRTRGCC*QKLVGQ
Trigger: TTGTCCAACTAATTTTTGGCAACAGCAACCTCTTGT...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTACAAGAGGTTGCTGTTaGCAAAAATTAGTTGGACAA +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFTRGCC*QKLVGQ
Trigger: TTGTCCAACTAATTTTTGGCAACAGCAACCTCTTGT...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGGGTAAAACAAGAGGTTaGTGTTGCCAAAAATTAGTT +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRGKTRG*CCQKLV
Trigger: AACTAATTTTTGGCAACAGCAACCTCTTGTTTTACC...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR GCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTGGTAAAACAAGAGGTTaGTGTTGCCAAAAATTAGTT +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFGKTRG*CCQKLV
Trigger: AACTAATTTTTGGCAACAGCAACCTCTTGTTTTACC...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CCA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTTCATTCACTTTAAGATaGTTGGAACCACTTATCAGT +
Preference number: 4 (lower is better)
Translates to: AYLILKLKATVIRDSCRFSFTLR*LEPLIS
Trigger: ACTGATAAGTGGTTCCAACCATCTTAAAGTGAATGA...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CCA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTCATTCACTTTAAGATaGTTGGAACCACTTATCAGT +
Preference number: 4 (lower is better)
Translates to: IAYLILKLKATVIRDSCRSFTLR*LEPLIS
Trigger: ACTGATAAGTGGTTCCAACCATCTTAAAGTGAATGA...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
3UTR CAA 72 bp ATGAACATGATTACATTTGCCTTCTCCAAAAGAAACTaGACTGTCGTCATTCACTTTAAGATGGTTGGAACC +
Preference number: 4 (lower is better)
Translates to: MNMITFAFSKRN*TVVIHFKMVGT
Trigger: GGTTCCAACCATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAATGTAATCATGTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR GCA 90 bp TTGCTGGATACCAATGAACATGATTACATTTGCCTTCTCCAAAAGAAACTTGACACAAGAGGTTGCTGTTaGCAAAAATTAGTTGGACAA +
Preference number: 4 (lower is better)
Translates to: LLDTNEHDYICLLQKKLDTRGCC*QKLVGQ
Trigger: TTGTCCAACTAATTTTTGGCAACAGCAACCTCTTGT...GTCAAGTTTCTTTTGGAGAAGGCAAATGTAATCATGTTCATTGGTATCCAGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR TCA 90 bp ATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATAGAGAAATTATGCAGTTAACGTGGTaGACTAGCTTCAGTATAATT +
Preference number: 4 (lower is better)
Translates to: IHFKMVGTTYQSRWHREIMQLTW*TSFSII
Trigger: AATTATACTGAAGCTAGTTCACCACGTTAACTGCAT...AATTTCTCTATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628739.2
CDS-3UTR CCA 90 bp ATTACATTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGTCATTCACTTTAAGATaGTTGGAACCACTTATCAGT +
Preference number: 4 (lower is better)
Translates to: ITFAFSKRNLTVVIHFKMSFTLR*LEPLIS
Trigger: ACTGATAAGTGGTTCCAACCATCTTAAAGTGAATGA...CATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAATGTAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS CCA 90 bp TTCACCAGGTGGTCGAGGTGTCTCGCGGCTCCTAATGTGGCTGTCTaGCTGCGTCGGGACGCGAGCCAGGCGGAGAGATGCGGAACCAGT +
Preference number: 5 (lower is better)
Translates to: FTRWSRCLAAPNVAV*LRRDASQAERCGTS
Trigger: ACTGGTTCCGCATCTCTCCGCCTGGCTCGCGTCCCGACGCAGCCAGACAGCCACATTAGGAGCCGCGAGACACCTCGACCACCTGGTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476373.1
ENST00000628860.1
CDS TCA 90 bp GTTGCCGTAGCCGCTGTCGCTGCCGCAGCCAGAGGAAGCAGATGTTaGGGGCTCTGTCTTAGGTTGTTTTTCAAGCGGCTCGCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: VAVAAVAAAARGSRC*GLCLRLFFKRLALP
Trigger: GGGAAGAGCGAGCCGCTTGAAAAACAACCTAAGACAGAGCCCTCAACATCTGCTTCCTCTGGCTGCGGCAGCGACAGCGGCTACGGCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628957.2
CDS TCA 90 bp TTACCGCAAAGAAACTGCTGTACTCCGGGATGGATTCGGAGGCGCTaGAACTTCCCCTTCACCAGGTGGTCGAGGTGTCTCGCGGCTCCT +
Preference number: 5 (lower is better)
Translates to: LPQRNCCTPGWIRRR*NFPFTRWSRCLAAP
Trigger: AGGAGCCGCGAGACACCTCGACCACCTGGTGAAGGGGAAGTTTCAGCGCCTCCGAATCCATCCCGGAGTACAGCAGTTTCTTTGCGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476373.1
ENST00000628860.1
CDS-3UTR CAA 90 bp AAAGGAGAGGGGGCCCCTCCACTAGAGGTCACTGGAGATGAGCCACTGCTTCCAGAGAACTGTTGCTGCTaGCTAGTCTTTCAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: KGEGAPPLEVTGDEPLLPENCCC*LVFQEP
Trigger: CGGCTCCTGAAAGACTAGCAAGCAGCAACAGTTCTC...TGGAAGCAGTGGCTCATCTCCAGTGACCTCTAGTGGAGGGGCCCCCTCTCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp ATAGCGTTTGGAATCCACCGGCACCACATCGATGGCCACATGGTACTGCTTCCCGTCAACACTGCTGCCTaGCTCTATCACGTGCACTCG +
Preference number: 5 (lower is better)
Translates to: IAFGIHRHHIDGHMVLLPVNTAA*LYHVHS
Trigger: CGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGAC...GGGAAGCAGTACCATGTGGCCATCGATGTGGTGCCGGTGGATTCCAAACGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp GGACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGCCACTGCTTCCACTTaGTGTGTCTGCGCCAAAGGT +
Preference number: 5 (lower is better)
Translates to: GLNLGQVNTAALLYHVHSATAST*CVCAKG
Trigger: ACCTTTGGCGCAGACACACAAAGTGGAAGCAGTGGC...CGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp ACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGAGAGGCAGGTTGACATaGGGCAGGTATGCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: TESGTGQHCCLALSRALGRGRLT*GRYASG
Trigger: TCCAGAGGCATACCTGCCCAATGTCAACCTGCCTCT...CCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp TTCAAAGGAGAGGGGGCCCCTCCACTAGAGGTCACTGGAGATGAGCCACTGCTTGCTGCTCCGCCTGTATaGGGTCTTGGAGTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: FKGEGAPPLEVTGDEPLLAAPPV*GLGVFF
Trigger: AAAGAAAACTCCAAGACCCAATACAGGCGGAGCAGC...AAGCAGTGGCTCATCTCCAGTGACCTCTAGTGGAGGGGCCCCCTCTCCTTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000625441.2
ENST00000626498.2
CDS-3UTR CAA 90 bp ATAGCGTTTGGAATCCACCGGCACCACATCGATGGCCACATGGTACTGCTTCCCGGGCTCTGTCTTAGGTaGTTTTTCAAGCGGCTCGCT +
Preference number: 5 (lower is better)
Translates to: IAFGIHRHHIDGHMVLLPGLCLR*FFKRLA
Trigger: AGCGAGCCGCTTGAAAAACAACCTAAGACAGAGCCC...GGGAAGCAGTACCATGTGGCCATCGATGTGGTGCCGGTGGATTCCAAACGCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000625441.2
ENST00000626498.2
CDS-3UTR CAA 90 bp CTTCAGTGGGCAAGGACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTAGCCACTGCTTCCACTTaGTGTGTCTGCGCCAAAGGT +
Preference number: 5 (lower is better)
Translates to: LQWARTESGTGQHCCLALATAST*CVCAKG
Trigger: ACCTTTGGCGCAGACACACAAAGTGGAAGCAGTGGC...TAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCCTTGCCCACTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp ATAGCGTTTGGAATCCACCGGCACCACATCGATGGCCACATGGTACTGCTTCCCGAGAACTGTTGCTGCTaGCTAGTCTTTCAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: IAFGIHRHHIDGHMVLLPENCCC*LVFQEP
Trigger: CGGCTCCTGAAAGACTAGCAAGCAGCAACAGTTCTC...GGGAAGCAGTACCATGTGGCCATCGATGTGGTGCCGGTGGATTCCAAACGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp CAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGGTTTGTACTTATGACCCTTGTGAACAGCTaGGGCAGAACCGAACCTGCC +
Preference number: 5 (lower is better)
Translates to: QVNTAALLYHVHSGFVLMTLVNS*GRTEPA
Trigger: GGCAGGTTCGGTTCTGCCCAAGCTGTTCACAAGGGT...CATAAGTACAAACCCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628739.2
CDS-3UTR CAA 90 bp CTTCAGTGGGCAAGGACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTAGGGCTCTGTCTTAGGTaGTTTTTCAAGCGGCTCGCT +
Preference number: 5 (lower is better)
Translates to: LQWARTESGTGQHCCLALGLCLR*FFKRLA
Trigger: AGCGAGCCGCTTGAAAAACAACCTAAGACAGAGCCC...TAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCCTTGCCCACTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000625441.2
ENST00000626498.2
CDS-3UTR CAA 90 bp CAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGGTTTGTACTTATGGCCACTGCTTCCACTTaGTGTGTCTGCGCCAAAGGT +
Preference number: 5 (lower is better)
Translates to: QVNTAALLYHVHSGFVLMATAST*CVCAKG
Trigger: ACCTTTGGCGCAGACACACAAAGTGGAAGCAGTGGC...CATAAGTACAAACCCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp CAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGGTTTGTACTTATGAGAGGCAGGTTGACATaGGGCAGGTATGCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: QVNTAALLYHVHSGFVLMRGRLT*GRYASG
Trigger: TCCAGAGGCATACCTGCCCAATGTCAACCTGCCTCT...CATAAGTACAAACCCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS GCA 90 bp GAAGCTCCATTTGAATATCTTTCTCTTCCAGACTTTCAGAGCTGTTaGCGTAGCCGCTGTCGCTGCCGCAGCCAGAGGAAGCAGATGTTG +
Preference number: 5 (lower is better)
Translates to: EAPFEYLSLPDFQSC*RSRCRCRSQRKQML
Trigger: CAACATCTGCTTCCTCTGGCTGCGGCAGCGACAGCGGCTACGGCAACAGCTCTGAAAGTCTGGAAGAGAAAGATATTCAAATGGAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000626877.1
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp AAAGGAGAGGGGGCCCCTCCACTAGAGGTCACTGGAGATGAGCCACTGCTTCCATTGTCATCCATCTCATaGTTGGTGAGTTTCATGCGA +
Preference number: 5 (lower is better)
Translates to: KGEGAPPLEVTGDEPLLPLSSIS*LVSFMR
Trigger: TCGCATGAAACTCACCAACAATGAGATGGATGACAA...TGGAAGCAGTGGCTCATCTCCAGTGACCTCTAGTGGAGGGGCCCCCTCTCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp TTCAAAGGAGAGGGGGCCCCTCCACTAGAGGTCACTGGAGATGAGCCACTGCTTCGTAATCTGTTGGTTTaGGTAAGCCGTTACTGTGGT +
Preference number: 5 (lower is better)
Translates to: FKGEGAPPLEVTGDEPLLRNLLV*VSRYCG
Trigger: ACCACAGTAACGGCTTACCAAAACCAACAGATTACG...AAGCAGTGGCTCATCTCCAGTGACCTCTAGTGGAGGGGCCCCCTCTCCTTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp TGCTTCCCTGGATCCAACCCTTTCACCTTGACCCGAACAGAGGGGAACATCCGCTTGTCATCCATCTCATaGTTGGTGAGTTTCATGCGA +
Preference number: 5 (lower is better)
Translates to: CFPGSNPFTLTRTEGNIRLSSIS*LVSFMR
Trigger: TCGCATGAAACTCACCAACAATGAGATGGATGACAA...GCGGATGTTCCCCTCTGTTCGGGTCAAGGTGAAAGGGTTGGATCCAGGGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628739.2
CDS-3UTR CAA 90 bp TGTTGCTGCTTGCTAGTCTTTCAGGAGCCGGTAAAACAAGAGGTTGCTGTTGCCGCTGCTCCGCCTGTATaGGGTCTTGGAGTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: CCCLLVFQEPVKQEVAVAAAPPV*GLGVFF
Trigger: AAAGAAAACTCCAAGACCCAATACAGGCGGAGCAGC...GGCAACAGCAACCTCTTGTTTTACCGGCTCCTGAAAGACTAGCAAGCAGCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000625441.2
ENST00000626498.2
CDS-3UTR CAA 90 bp ACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGCCACAGTTCAGATCCTaGAAGCTCCATTTGAATATC +
Preference number: 5 (lower is better)
Translates to: TESGTGQHCCLALSRALGPQFRS*KLHLNI
Trigger: GATATTCAAATGGAGCTTCAAGGATCTGAACTGTGG...CCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp ATAGCGTTTGGAATCCACCGGCACCACATCGATGGCCACATGGTACTGCTTCCCTCATCCATCTCATTGTaGGTGAGTTTCATGCGATCA +
Preference number: 5 (lower is better)
Translates to: IAFGIHRHHIDGHMVLLPSSISL*VSFMRS
Trigger: TGATCGCATGAAACTCACCAACAATGAGATGGATGA...GGGAAGCAGTACCATGTGGCCATCGATGTGGTGCCGGTGGATTCCAAACGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp TGCTTGCTAGTCTTTCAGGAGCCGGTAAAACAAGAGGTTGCTGTTGCCAAAAATTCCAACCCTTTCACCTaGACCCGAACAGAGGGGAAC +
Preference number: 5 (lower is better)
Translates to: CLLVFQEPVKQEVAVAKNSNPFT*TRTEGN
Trigger: GTTCCCCTCTGTTCGGGTCAAGGTGAAAGGGTTGGA...ATTTTTGGCAACAGCAACCTCTTGTTTTACCGGCTCCTGAAAGACTAGCAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp CTTCAGTGGGCAAGGACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTATCATCCATCTCATTGTaGGTGAGTTTCATGCGATCA +
Preference number: 5 (lower is better)
Translates to: LQWARTESGTGQHCCLALSSISL*VSFMRS
Trigger: TGATCGCATGAAACTCACCAACAATGAGATGGATGA...TAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCCTTGCCCACTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp CTTCAGTGGGCAAGGACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTAAGAATGATGTGGCCTTaGTCATCCATCTCATTGTTG +
Preference number: 5 (lower is better)
Translates to: LQWARTESGTGQHCCLALRMMWP*SSISLL
Trigger: CAACAATGAGATGGATGACAAAGGCCACATCATTCT...TAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCCTTGCCCACTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp ATAGCGTTTGGAATCCACCGGCACCACATCGATGGCCACATGGTACTGCTTCCCAACAAGAGGTTGCTGTaGCCAAAAATTAGTTGGACA +
Preference number: 5 (lower is better)
Translates to: IAFGIHRHHIDGHMVLLPNKRLL*PKISWT
Trigger: TGTCCAACTAATTTTTGGCAACAGCAACCTCTTGTT...GGGAAGCAGTACCATGTGGCCATCGATGTGGTGCCGGTGGATTCCAAACGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp ACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGATTGCATATCTCATTTaGAAGCTCAAGGCCACTGTA +
Preference number: 5 (lower is better)
Translates to: TESGTGQHCCLALSRALGIAYLI*KLKATV
Trigger: TACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT...CCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp TTGGTGAGTTTCATGCGATCAAAGCTGATGATCTGCCGCATCCAGGTCTCTCCCTCATCCATCTCATTGTaGGTGAGTTTCATGCGATCA +
Preference number: 5 (lower is better)
Translates to: LVSFMRSKLMICRIQVSPSSISL*VSFMRS
Trigger: TGATCGCATGAAACTCACCAACAATGAGATGGATGA...GGGAGAGACCTGGATGCGGCAGATCATCAGCTTTGATCGCATGAAACTCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp CAGGTCAACACTGCTGCCTTGCTCTATCACGTGCACTCGGGGTTTGTACTTATGTTGTCATCCATCTCATaGTTGGTGAGTTTCATGCGA +
Preference number: 5 (lower is better)
Translates to: QVNTAALLYHVHSGFVLMLSSIS*LVSFMR
Trigger: TCGCATGAAACTCACCAACAATGAGATGGATGACAA...CATAAGTACAAACCCCGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp TGTTGCTGCTTGCTAGTCTTTCAGGAGCCGGTAAAACAAGAGGTTGCTGTTGCCCGTAATCTGTTGGTTTaGGTAAGCCGTTACTGTGGT +
Preference number: 5 (lower is better)
Translates to: CCCLLVFQEPVKQEVAVARNLLV*VSRYCG
Trigger: ACCACAGTAACGGCTTACCAAAACCAACAGATTACG...GGCAACAGCAACCTCTTGTTTTACCGGCTCCTGAAAGACTAGCAAGCAGCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp CTTCAGTGGGCAAGGACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTAAACAAGAGGTTGCTGTaGCCAAAAATTAGTTGGACA +
Preference number: 5 (lower is better)
Translates to: LQWARTESGTGQHCCLALNKRLL*PKISWT
Trigger: TGTCCAACTAATTTTTGGCAACAGCAACCTCTTGTT...TAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCCTTGCCCACTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTTCCAACCCTTTCACCTaGACCCGAACAGAGGGGAAC +
Preference number: 5 (lower is better)
Translates to: AYLILKLKATVIRDSCRFSNPFT*TRTEGN
Trigger: GTTCCCCTCTGTTCGGGTCAAGGTGAAAGGGTTGGA...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTCCAACCCTTTCACCTaGACCCGAACAGAGGGGAAC +
Preference number: 5 (lower is better)
Translates to: IAYLILKLKATVIRDSCRSNPFT*TRTEGN
Trigger: GTTCCCCTCTGTTCGGGTCAAGGTGAAAGGGTTGGA...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp ACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATTCCAACCCTTTCACCTaGACCCGAACAGAGGGGAAC +
Preference number: 5 (lower is better)
Translates to: TVVIHFKMVGTTYQSRWHSNPFT*TRTEGN
Trigger: GTTCCCCTCTGTTCGGGTCAAGGTGAAAGGGTTGGA...ATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp TGTTGCTGCTTGCTAGTCTTTCAGGAGCCGGTAAAACAAGAGGTTGCTGTTGCCAGAATGATGTGGCCTTaGTCATCCATCTCATTGTTG +
Preference number: 5 (lower is better)
Translates to: CCCLLVFQEPVKQEVAVARMMWP*SSISLL
Trigger: CAACAATGAGATGGATGACAAAGGCCACATCATTCT...GGCAACAGCAACCTCTTGTTTTACCGGCTCCTGAAAGACTAGCAAGCAGCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTGTCAACACTGCTGCCTaGCTCTATCACGTGCACTCG +
Preference number: 5 (lower is better)
Translates to: AYLILKLKATVIRDSCRFVNTAA*LYHVHS
Trigger: CGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGAC...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGGTCAACACTGCTGCCTaGCTCTATCACGTGCACTCG +
Preference number: 5 (lower is better)
Translates to: IAYLILKLKATVIRDSCRVNTAA*LYHVHS
Trigger: CGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGAC...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp ACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATGTCAACACTGCTGCCTaGCTCTATCACGTGCACTCG +
Preference number: 5 (lower is better)
Translates to: TVVIHFKMVGTTYQSRWHVNTAA*LYHVHS
Trigger: CGAGTGCACGTGATAGAGCAAGGCAGCAGTGTTGAC...ATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTGCCACTGCTTCCACTTaGTGTGTCTGCGCCAAAGGT +
Preference number: 5 (lower is better)
Translates to: AYLILKLKATVIRDSCRFATAST*CVCAKG
Trigger: ACCTTTGGCGCAGACACACAAAGTGGAAGCAGTGGC...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGGCCACTGCTTCCACTTaGTGTGTCTGCGCCAAAGGT +
Preference number: 5 (lower is better)
Translates to: IAYLILKLKATVIRDSCRATAST*CVCAKG
Trigger: ACCTTTGGCGCAGACACACAAAGTGGAAGCAGTGGC...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGAGAGGCAGGTTGACATaGGGCAGGTATGCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: IAYLILKLKATVIRDSCRRGRLT*GRYASG
Trigger: TCCAGAGGCATACCTGCCCAATGTCAACCTGCCTCT...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTAGAGGCAGGTTGACATaGGGCAGGTATGCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: AYLILKLKATVIRDSCRFRGRLT*GRYASG
Trigger: TCCAGAGGCATACCTGCCCAATGTCAACCTGCCTCT...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp CTTCAGTGGGCAAGGACTGAATCTGGGACAGGTCAACACTGCTGCCTTGCTCTATTCACTTTAAGATGGTaGGAACCACTTATCAGTCTA +
Preference number: 5 (lower is better)
Translates to: LQWARTESGTGQHCCLALFTLRW*EPLISL
Trigger: TAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAA...TAGAGCAAGGCAGCAGTGTTGACCTGTCCCAGATTCAGTCCTTGCCCACTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTGGGCTCTGTCTTAGGTaGTTTTTCAAGCGGCTCGCT +
Preference number: 5 (lower is better)
Translates to: AYLILKLKATVIRDSCRFGLCLR*FFKRLA
Trigger: AGCGAGCCGCTTGAAAAACAACCTAAGACAGAGCCC...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628957.2
CDS-3UTR CAA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGGGGCTCTGTCTTAGGTaGTTTTTCAAGCGGCTCGCT +
Preference number: 5 (lower is better)
Translates to: IAYLILKLKATVIRDSCRGLCLR*FFKRLA
Trigger: AGCGAGCCGCTTGAAAAACAACCTAAGACAGAGCCC...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628957.2
CDS-3UTR CAA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTGAGAACTGTTGCTGCTaGCTAGTCTTTCAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: AYLILKLKATVIRDSCRFENCCC*LVFQEP
Trigger: CGGCTCCTGAAAGACTAGCAAGCAGCAACAGTTCTC...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGGAGAACTGTTGCTGCTaGCTAGTCTTTCAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: IAYLILKLKATVIRDSCRENCCC*LVFQEP
Trigger: CGGCTCCTGAAAGACTAGCAAGCAGCAACAGTTCTC...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp ACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATGAGAACTGTTGCTGCTaGCTAGTCTTTCAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: TVVIHFKMVGTTYQSRWHENCCC*LVFQEP
Trigger: CGGCTCCTGAAAGACTAGCAAGCAGCAACAGTTCTC...ATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTCTTGGAGTTTTCTTTaGCTGGGTCTCCCCACCAAG +
Preference number: 5 (lower is better)
Translates to: IAYLILKLKATVIRDSCRSWSFL*LGLPTK
Trigger: CTTGGTGGGGAGACCCAGCAAAAGAAAACTCCAAGA...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628957.2
CDS-3UTR CAA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTTCTTGGAGTTTTCTTTaGCTGGGTCTCCCCACCAAG +
Preference number: 5 (lower is better)
Translates to: AYLILKLKATVIRDSCRFSWSFL*LGLPTK
Trigger: CTTGGTGGGGAGACCCAGCAAAAGAAAACTCCAAGA...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628957.2
CDS-3UTR CAA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGCGCCTGTATTGGGTCTaGGAGTTTTCTTTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: IAYLILKLKATVIRDSCRRLYWV*EFSFAG
Trigger: CCCAGCAAAAGAAAACTCCAAGACCCAATACAGGCG...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628957.2
CDS-3UTR CAA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTCGCCTGTATTGGGTCTaGGAGTTTTCTTTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: AYLILKLKATVIRDSCRFRLYWV*EFSFAG
Trigger: CCCAGCAAAAGAAAACTCCAAGACCCAATACAGGCG...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628957.2
CDS-3UTR CAA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTGCTGCTCCGCCTGTATaGGGTCTTGGAGTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: AYLILKLKATVIRDSCRFAAPPV*GLGVFF
Trigger: AAAGAAAACTCCAAGACCCAATACAGGCGGAGCAGC...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628957.2
CDS-3UTR CAA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGGCTGCTCCGCCTGTATaGGGTCTTGGAGTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: IAYLILKLKATVIRDSCRAAPPV*GLGVFF
Trigger: AAAGAAAACTCCAAGACCCAATACAGGCGGAGCAGC...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628957.2
CDS-3UTR CAA 90 bp AAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGTCCAACCCTTTCACCTaGACCCGAACAGAGGGGAAC +
Preference number: 5 (lower is better)
Translates to: KRNLTVVIHFKMVGTTYQSNPFT*TRTEGN
Trigger: GTTCCCCTCTGTTCGGGTCAAGGTGAAAGGGTTGGA...CTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp TGCTTGCTAGTCTTTCAGGAGCCGGTAAAACAAGAGGTTGCTGTTGCCAAAAATCGTAATCTGTTGGTTTaGGTAAGCCGTTACTGTGGT +
Preference number: 5 (lower is better)
Translates to: CLLVFQEPVKQEVAVAKNRNLLV*VSRYCG
Trigger: ACCACAGTAACGGCTTACCAAAACCAACAGATTACG...ATTTTTGGCAACAGCAACCTCTTGTTTTACCGGCTCCTGAAAGACTAGCAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGGAACCGCTTTTTGAATaGGTGACCCCCAGGGAAGAT +
Preference number: 5 (lower is better)
Translates to: IAYLILKLKATVIRDSCREPLFE*VTPRED
Trigger: ATCTTCCCTGGGGGTCACCAATTCAAAAAGCGGTTC...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTGAACCGCTTTTTGAATaGGTGACCCCCAGGGAAGAT +
Preference number: 5 (lower is better)
Translates to: AYLILKLKATVIRDSCRFEPLFE*VTPRED
Trigger: ATCTTCCCTGGGGGTCACCAATTCAAAAAGCGGTTC...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp CAACTAAGTGCTTCTGGGGTGATGGAGTTTGGCAGAAAAATATTTCCAGGTGACCCACAGTTCAGATCCTaGAAGCTCCATTTGAATATC +
Preference number: 5 (lower is better)
Translates to: QLSASGVMEFGRKIFPGDPQFRS*KLHLNI
Trigger: GATATTCAAATGGAGCTTCAAGGATCTGAACTGTGG...GTCACCTGGAAATATTTTTCTGCCAAACTCCATCACCCCAGAAGCACTTAGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTCGTAATCTGTTGGTTTaGGTAAGCCGTTACTGTGGT +
Preference number: 5 (lower is better)
Translates to: AYLILKLKATVIRDSCRFRNLLV*VSRYCG
Trigger: ACCACAGTAACGGCTTACCAAAACCAACAGATTACG...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGCGTAATCTGTTGGTTTaGGTAAGCCGTTACTGTGGT +
Preference number: 5 (lower is better)
Translates to: IAYLILKLKATVIRDSCRRNLLV*VSRYCG
Trigger: ACCACAGTAACGGCTTACCAAAACCAACAGATTACG...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp CAACTAAGTGCTTCTGGGGTGATGGAGTTTGGCAGAAAAATATTTCCAGGTGACAACAAGAGGTTGCTGTaGCCAAAAATTAGTTGGACA +
Preference number: 5 (lower is better)
Translates to: QLSASGVMEFGRKIFPGDNKRLL*PKISWT
Trigger: TGTCCAACTAATTTTTGGCAACAGCAACCTCTTGTT...GTCACCTGGAAATATTTTTCTGCCAAACTCCATCACCCCAGAAGCACTTAGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp TTGCTGGATACCAATGAACATGATTACATTTGCCTTCTCCAAAAGAAACTTGACGAACCGCTTTTTGAATaGGTGACCCCCAGGGAAGAT +
Preference number: 5 (lower is better)
Translates to: LLDTNEHDYICLLQKKLDEPLFE*VTPRED
Trigger: ATCTTCCCTGGGGGTCACCAATTCAAAAAGCGGTTC...GTCAAGTTTCTTTTGGAGAAGGCAAATGTAATCATGTTCATTGGTATCCAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp ATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATAGAGAAATTTCTTGGAGTTTTCTTTaGCTGGGTCTCCCCACCAAG +
Preference number: 5 (lower is better)
Translates to: IHFKMVGTTYQSRWHREISWSFL*LGLPTK
Trigger: CTTGGTGGGGAGACCCAGCAAAAGAAAACTCCAAGA...AATTTCTCTATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000625441.2
ENST00000626498.2
CDS-3UTR CAA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTCCACAGTTCAGATCCTaGAAGCTCCATTTGAATATC +
Preference number: 5 (lower is better)
Translates to: AYLILKLKATVIRDSCRFPQFRS*KLHLNI
Trigger: GATATTCAAATGGAGCTTCAAGGATCTGAACTGTGG...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTTCATCCATCTCATTGTaGGTGAGTTTCATGCGATCA +
Preference number: 5 (lower is better)
Translates to: AYLILKLKATVIRDSCRFSSISL*VSFMRS
Trigger: TGATCGCATGAAACTCACCAACAATGAGATGGATGA...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTCATCCATCTCATTGTaGGTGAGTTTCATGCGATCA +
Preference number: 5 (lower is better)
Translates to: IAYLILKLKATVIRDSCRSSISL*VSFMRS
Trigger: TGATCGCATGAAACTCACCAACAATGAGATGGATGA...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTGTCATCCATCTCATaGTTGGTGAGTTTCATGCGA +
Preference number: 5 (lower is better)
Translates to: IAYLILKLKATVIRDSCRLSSIS*LVSFMR
Trigger: TCGCATGAAACTCACCAACAATGAGATGGATGACAA...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTTTGTCATCCATCTCATaGTTGGTGAGTTTCATGCGA +
Preference number: 5 (lower is better)
Translates to: AYLILKLKATVIRDSCRFLSSIS*LVSFMR
Trigger: TCGCATGAAACTCACCAACAATGAGATGGATGACAA...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTAGAATGATGTGGCCTTaGTCATCCATCTCATTGTTG +
Preference number: 5 (lower is better)
Translates to: AYLILKLKATVIRDSCRFRMMWP*SSISLL
Trigger: CAACAATGAGATGGATGACAAAGGCCACATCATTCT...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGAGAATGATGTGGCCTTaGTCATCCATCTCATTGTTG +
Preference number: 5 (lower is better)
Translates to: IAYLILKLKATVIRDSCRRMMWP*SSISLL
Trigger: CAACAATGAGATGGATGACAAAGGCCACATCATTCT...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp CAACTAAGTGCTTCTGGGGTGATGGAGTTTGGCAGAAAAATATTTCCAGGTGACTTCACTTTAAGATGGTaGGAACCACTTATCAGTCTA +
Preference number: 5 (lower is better)
Translates to: QLSASGVMEFGRKIFPGDFTLRW*EPLISL
Trigger: TAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAA...GTCACCTGGAAATATTTTTCTGCCAAACTCCATCACCCCAGAAGCACTTAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGAACAAGAGGTTGCTGTaGCCAAAAATTAGTTGGACA +
Preference number: 5 (lower is better)
Translates to: IAYLILKLKATVIRDSCRNKRLL*PKISWT
Trigger: TGTCCAACTAATTTTTGGCAACAGCAACCTCTTGTT...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTAACAAGAGGTTGCTGTaGCCAAAAATTAGTTGGACA +
Preference number: 5 (lower is better)
Translates to: AYLILKLKATVIRDSCRFNKRLL*PKISWT
Trigger: TGTCCAACTAATTTTTGGCAACAGCAACCTCTTGTT...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGATTGCATATCTCATTTaGAAGCTCAAGGCCACTGTA +
Preference number: 5 (lower is better)
Translates to: IAYLILKLKATVIRDSCRIAYLI*KLKATV
Trigger: TACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp ACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATATTGCATATCTCATTTaGAAGCTCAAGGCCACTGTA +
Preference number: 5 (lower is better)
Translates to: TVVIHFKMVGTTYQSRWHIAYLI*KLKATV
Trigger: TACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT...ATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTTTCACTTTAAGATGGTaGGAACCACTTATCAGTCTA +
Preference number: 5 (lower is better)
Translates to: AYLILKLKATVIRDSCRFFTLRW*EPLISL
Trigger: TAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAA...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTCACTTTAAGATGGTaGGAACCACTTATCAGTCTA +
Preference number: 5 (lower is better)
Translates to: IAYLILKLKATVIRDSCRFTLRW*EPLISL
Trigger: TAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAA...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp GCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTTTTCTCCAAAAGAAACTaGACTGTCGTCATTCACTTT +
Preference number: 5 (lower is better)
Translates to: AYLILKLKATVIRDSCRFFSKRN*TVVIHF
Trigger: AAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAA...AAACCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp ATTGCATATCTCATTTTGAAGCTCAAGGCCACTGTAATCAGAGATTCCTGTAGGTTCTCCAAAAGAAACTaGACTGTCGTCATTCACTTT +
Preference number: 5 (lower is better)
Translates to: IAYLILKLKATVIRDSCRFSKRN*TVVIHF
Trigger: AAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAA...CCTACAGGAATCTCTGATTACAGTGGCCTTGAGCTTCAAAATGAGATATGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
ENST00000628957.2
CDS-3UTR CAA 90 bp ACTGTCGTCATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATTTCTCCAAAAGAAACTaGACTGTCGTCATTCACTTT +
Preference number: 5 (lower is better)
Translates to: TVVIHFKMVGTTYQSRWHFSKRN*TVVIHF
Trigger: AAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAA...ATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp ATTACATTTGCCTTCTCCAAAAGAAACTTGACTGTCGTCATTCACTTTAAGATGCCACAGTTCAGATCCTaGAAGCTCCATTTGAATATC +
Preference number: 5 (lower is better)
Translates to: ITFAFSKRNLTVVIHFKMPQFRS*KLHLNI
Trigger: GATATTCAAATGGAGCTTCAAGGATCTGAACTGTGG...CATCTTAAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAAGGCAAATGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp TTGCTGGATACCAATGAACATGATTACATTTGCCTTCTCCAAAAGAAACTTGACTTCTCCAAAAGAAACTaGACTGTCGTCATTCACTTT +
Preference number: 5 (lower is better)
Translates to: LLDTNEHDYICLLQKKLDFSKRN*TVVIHF
Trigger: AAAGTGAATGACGACAGTCAAGTTTCTTTTGGAGAA...GTCAAGTTTCTTTTGGAGAAGGCAAATGTAATCATGTTCATTGGTATCCAGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS-3UTR CAA 90 bp ATTCACTTTAAGATGGTTGGAACCACTTATCAGTCTAGATGGCATAGAGAAATTTTCACTTTAAGATGGTaGGAACCACTTATCAGTCTA +
Preference number: 5 (lower is better)
Translates to: IHFKMVGTTYQSRWHREIFTLRW*EPLISL
Trigger: TAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAA...AATTTCTCTATGCCATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625441.2
ENST00000626498.2
ENST00000628739.2
CDS CCA 72 bp TCACCAGGTGGTCGAGGTGTCTCGCGGCTCCTAATGTaGCTGTCTGGCTGCGTCGGGACGCGAGCCAGGCGG +
Preference number: 6 (lower is better)
Translates to: SPGGRGVSRLLM*LSGCVGTRARR
Trigger: CCGCCTGGCTCGCGTCCCGACGCAGCCAGACAGCCACATTAGGAGCCGCGAGACACCTCGACCACCTGGTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476373.1
ENST00000628860.1
CDS CAA 90 bp CGCAGCTCAGGCTGCTCCGCCTGTATTGGGTCTTGGAGTTTTCTTTaGCTGGGTCTCCCCACCAAGGCTTCCACGGAGAAGGCACGCGCC +
Preference number: 6 (lower is better)
Translates to: RSSGCSACIGSWSFL*LGLPTKASTEKARA
Trigger: GGCGCGTGCCTTCTCCGTGGAAGCCTTGGTGGGGAGACCCAGCAAAAGAAAACTCCAAGACCCAATACAGGCGGAGCAGCCTGAGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000476373.1
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628860.1
ENST00000628957.2
CDS GCA 72 bp CCAGACTTTCAGAGCTGTTGCCGTAGCCGCTGTCGCTaGCGCAGCCAGAGGAAGCAGATGTTGAGGGCTCTG +
Preference number: 6 (lower is better)
Translates to: PDFQSCCRSRCR*RSQRKQMLRAL
Trigger: CAGAGCCCTCAACATCTGCTTCCTCTGGCTGCGGCAGCGACAGCGGCTACGGCAACAGCTCTGAAAGTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000626877.1
ENST00000628739.2
ENST00000628957.2
CDS TCA 72 bp GCCGCTGTCGCTGCCGCAGCCAGAGGAAGCAGATGTTaGGGGCTCTGTCTTAGGTTGTTTTTCAAGCGGCTC +
Preference number: 6 (lower is better)
Translates to: AAVAAAARGSRC*GLCLRLFFKRL
Trigger: GAGCCGCTTGAAAAACAACCTAAGACAGAGCCCTCAACATCTGCTTCCTCTGGCTGCGGCAGCGACAGCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628957.2
CDS GCA 72 bp CTCAGAGCCATCCCTGGAAGGCAAGAAGCAGTGTGTTaGTGTGTCAAGAGGCCAGGCCAGCCCAGTGGTTCT +
Preference number: 6 (lower is better)
Translates to: LRAIPGRQEAVC*CVKRPGQPSGS
Trigger: AGAACCACTGGGCTGGCCTGGCCTCTTGACACAGCAACACACTGCTTCTTGCCTTCCAGGGATGGCTCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373296.8
ENST00000476373.1
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628860.1
CDS CAA 72 bp ACATGGTACTGCTTCCCTGGATCCAACCCTTTCACCTaGACCCGAACAGAGGGGAACATCCGCCTGCCCGCT +
Preference number: 6 (lower is better)
Translates to: TWYCFPGSNPFT*TRTEGNIRLPA
Trigger: AGCGGGCAGGCGGATGTTCCCCTCTGTTCGGGTCAAGGTGAAAGGGTTGGATCCAGGGAAGCAGTACCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000628957.2
CDS TCA 72 bp AGAAACTGCTGTACTCCGGGATGGATTCGGAGGCGCTaGAACTTCCCCTTCACCAGGTGGTCGAGGTGTCTC +
Preference number: 6 (lower is better)
Translates to: RNCCTPGWIRRR*NFPFTRWSRCL
Trigger: GAGACACCTCGACCACCTGGTGAAGGGGAAGTTTCAGCGCCTCCGAATCCATCCCGGAGTACAGCAGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476373.1
ENST00000628860.1
CDS CAA 72 bp GGCTGCTCCGCCTGTATTGGGTCTTGGAGTTTTCTTTaGCTGGGTCTCCCCACCAAGGCTTCCACGGAGAAG +
Preference number: 6 (lower is better)
Translates to: GCSACIGSWSFL*LGLPTKASTEK
Trigger: CTTCTCCGTGGAAGCCTTGGTGGGGAGACCCAGCAAAAGAAAACTCCAAGACCCAATACAGGCGGAGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000476373.1
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628860.1
ENST00000628957.2
CDS CAA 90 bp TCGATGGCCACATGGTACTGCTTCCCTGGATCCAACCCTTTCACCTaGACCCGAACAGAGGGGAACATCCGCCTGCCCGCTTTAGTAATG +
Preference number: 6 (lower is better)
Translates to: SMATWYCFPGSNPFT*TRTEGNIRLPALVM
Trigger: CATTACTAAAGCGGGCAGGCGGATGTTCCCCTCTGTTCGGGTCAAGGTGAAAGGGTTGGATCCAGGGAAGCAGTACCATGTGGCCATCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000628957.2
CDS TCA 72 bp TTGCTGTGTCAAGAGGCCAGGCCAGCCCAGTGGTTCTaGAGTCAAGTCTCAGTCAGAGCTCATTCACTCTGC +
Preference number: 6 (lower is better)
Translates to: LLCQEARPAQWF*SQVSVRAHSLC
Trigger: GCAGAGTGAATGAGCTCTGACTGAGACTTGACTTCAGAACCACTGGGCTGGCCTGGCCTCTTGACACAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373296.8
ENST00000476373.1
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000628860.1
CDS CAA 72 bp ATTAAGTGCCTAATGTGTGTGACCCTTGTGAACAGCTaGGGCAGAACCGAACCTGCCCGCTTTAGTAATGAT +
Preference number: 6 (lower is better)
Translates to: IKCLMCVTLVNS*GRTEPARFSND
Trigger: ATCATTACTAAAGCGGGCAGGTTCGGTTCTGCCCAAGCTGTTCACAAGGGTCACACACATTAGGCACTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626877.1
ENST00000628739.2
CDS CAA 90 bp CATCTCAGTCCCGATGTCATGGAATCTTTTCCACAGTTCAGATCCTaGAAGCTCCATTTGAATATCTTTCTCTTCCAGACTTTCAGAGCT +
Preference number: 6 (lower is better)
Translates to: HLSPDVMESFPQFRS*KLHLNIFLFQTFRA
Trigger: AGCTCTGAAAGTCTGGAAGAGAAAGATATTCAAATGGAGCTTCAAGGATCTGAACTGTGGAAAAGATTCCATGACATCGGGACTGAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000373294.8
ENST00000373296.8
ENST00000619509.1
ENST00000625441.2
ENST00000626498.2
ENST00000626877.1
ENST00000628739.2
ENST00000628957.2