Pregenerated sensors for TBX20 (Homo sapiens)
Ensembl gene IDs: ENSG00000164532Ensembl transcript IDs: ENST00000408931.4, ENST00000492961.1
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGAAGGCAGCCGGAGAGGAGAGGGCCCACCGAGCACTACGGCGGGTaGGCACGCCCCGGGGCGCTCGGCAGGACGACAGTCTGCACAGCC | + |
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Preference number: 5 (lower is better) Translates to: RRQPERRGPTEHYGG*ARPGALGRTTVCTA Trigger: GGCTGTGCAGACTGTCGTCCTGCCGAGCGCCCCGGGGCGTGCGCACCCGCCGTAGTGCTCGGTGGGCCCTCTCCTCTCCGGCTGCCTTCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408931.4 |
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| CDS TCA 90 bp | GTCCTTCCTCCCTCTGGGGCTGGGGACAGCCGGGATGTCCCAGGCTaGGGTGGCCACCAGCCGAGCGCGGCTGCTAGGACGCTGGCGTGG | + |
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Preference number: 5 (lower is better) Translates to: VLPPSGAGDSRDVPG*GGHQPSAAARTLAW Trigger: CCACGCCAGCGTCCTAGCAGCCGCGCTCGGCTGGTGGCCACCTCAGCCTGGGACATCCCGGCTGTCCCCAGCCCCAGAGGGAGGAAGGAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408931.4 |
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| CDS GCA 90 bp | TACGGCGGGTGCGCACGCCCCGGGGCGCTCGGCAGGACGACAGTCTaGACAGCCCGAAGGCGGAAACGAGCATCAACTGCACAAAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: YGGCARPGALGRTTV*TARRRKRASTAQSP Trigger: AGGACTTTGTGCAGTTGATGCTCGTTTCCGCCTTCGGGCTGTGCAGACTGTCGTCCTGCCGAGCGCCCCGGGGCGTGCGCACCCGCCGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408931.4 |
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| CDS CCA 90 bp | GACATGAGCGCGGCAATGGAGAAGGCGTTGGCCCGAGAGGAGAGTTaGGGCTTGGGGGACGCCGTGAACTCCATGGTCCCCAGCACGCGG | + |
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Preference number: 5 (lower is better) Translates to: DMSAAMEKALAREES*GLGDAVNSMVPSTR Trigger: CCGCGTGCTGGGGACCATGGAGTTCACGGCGTCCCCCAAGCCCCAACTCTCCTCTCGGGCCAACGCCTTCTCCATTGCCGCGCTCATGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408931.4 |
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| CDS GCA 90 bp | TCAGTGGCTCAGTGCACAGAGAGGAGGAGGACGGGCTGCTGCCACTaGCTCCACCAAACTCCCCATGAGCATCCAGGCTGGTCAGCTCAC | + |
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Preference number: 5 (lower is better) Translates to: SVAQCTERRRTGCCH*LHQTPHEHPGWSAH Trigger: GTGAGCTGACCAGCCTGGATGCTCATGGGGAGTTTGGTGGAGGCAGTGGCAGCAGCCCGTCCTCCTCCTCTCTGTGCACTGAGCCACTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000408931.4 ENST00000492961.1 |
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| CDS CCA 90 bp | ACCTCTTGTTGTCCACAGGGACGATGTCCATCAGGACTATGTACTTaGCCTCAGGATCCACCCCCGAAAAGGACACCCGGATGGTTGGAA | + |
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Preference number: 5 (lower is better) Translates to: TSCCPQGRCPSGLCT*PQDPPPKRTPGWLE Trigger: TTCCAACCATCCGGGTGTCCTTTTCGGGGGTGGATCCTGAGGCCAAGTACATAGTCCTGATGGACATCGTCCCTGTGGACAACAAGAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000408931.4 ENST00000492961.1 |
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| CDS GCA 72 bp | CCGGAGAGGAGAGGGCCCACCGAGCACTACGGCGGGTaGGCACGCCCCGGGGCGCTCGGCAGGACGACAGTC | + |
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Preference number: 6 (lower is better) Translates to: PERRGPTEHYGG*ARPGALGRTTV Trigger: GACTGTCGTCCTGCCGAGCGCCCCGGGGCGTGCGCACCCGCCGTAGTGCTCGGTGGGCCCTCTCCTCTCCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408931.4 |
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| CDS CCA 72 bp | GACGCCGTGAACTCCATGGTCCCCAGCACGCGGTCCTaGCCAGGGACGGGGTCGTCCGAACTGCCGTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: DAVNSMVPSTRS*PGTGSSELPSR Trigger: TCTGGACGGCAGTTCGGACGACCCCGTCCCTGGCCAGGACCGCGTGCTGGGGACCATGGAGTTCACGGCGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408931.4 |
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| CDS CAA 72 bp | CCGCCGCTCGACATGAGCGCGGCAATGGAGAAGGCGTaGGCCCGAGAGGAGAGTTGGGGCTTGGGGGACGCC | + |
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Preference number: 6 (lower is better) Translates to: PPLDMSAAMEKA*AREESWGLGDA Trigger: GGCGTCCCCCAAGCCCCAACTCTCCTCTCGGGCCAACGCCTTCTCCATTGCCGCGCTCATGTCGAGCGGCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000408931.4 ENST00000492961.1 |
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| CDS GCA 72 bp | TGCGCACGCCCCGGGGCGCTCGGCAGGACGACAGTCTaGACAGCCCGAAGGCGGAAACGAGCATCAACTGCA | + |
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Preference number: 6 (lower is better) Translates to: CARPGALGRTTV*TARRRKRASTA Trigger: TGCAGTTGATGCTCGTTTCCGCCTTCGGGCTGTGCAGACTGTCGTCCTGCCGAGCGCCCCGGGGCGTGCGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408931.4 |
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| CDS GCA 72 bp | GCACGCGGTCCTGGCCAGGGACGGGGTCGTCCGAACTaGCGTCCAGATTCCCCAAGGGAGACAAAGACCCGA | + |
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Preference number: 6 (lower is better) Translates to: ARGPGQGRGRPN*RPDSPRETKTR Trigger: TCGGGTCTTTGTCTCCCTTGGGGAATCTGGACGGCAGTTCGGACGACCCCGTCCCTGGCCAGGACCGCGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408931.4 |
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| CDS CCA 72 bp | GCGGCAATGGAGAAGGCGTTGGCCCGAGAGGAGAGTTaGGGCTTGGGGGACGCCGTGAACTCCATGGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: AAMEKALAREES*GLGDAVNSMVP Trigger: GGGGACCATGGAGTTCACGGCGTCCCCCAAGCCCCAACTCTCCTCTCGGGCCAACGCCTTCTCCATTGCCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000408931.4 ENST00000492961.1 |
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| CDS CAA 90 bp | TCCTTAGAGCCGCCGCTCGACATGAGCGCGGCAATGGAGAAGGCGTaGGCCCGAGAGGAGAGTTGGGGCTTGGGGGACGCCGTGAACTCC | + |
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Preference number: 6 (lower is better) Translates to: SLEPPLDMSAAMEKA*AREESWGLGDAVNS Trigger: GGAGTTCACGGCGTCCCCCAAGCCCCAACTCTCCTCTCGGGCCAACGCCTTCTCCATTGCCGCGCTCATGTCGAGCGGCGGCTCTAAGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000408931.4 ENST00000492961.1 |
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| CDS CCA 72 bp | CCGAAGGCGGAAACGAGCATCAACTGCACAAAGTCCTaGGGTCCTGGAGCATCCCCTCCGCGTCCTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PKAETSINCTKS*GPGASPPRPSS Trigger: GGAGGAAGGACGCGGAGGGGATGCTCCAGGACCCCAGGACTTTGTGCAGTTGATGCTCGTTTCCGCCTTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408931.4 |
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| CDS GCA 72 bp | AGTCTGCACAGCCCGAAGGCGGAAACGAGCATCAACTaGACAAAGTCCTGGGGTCCTGGAGCATCCCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: SLHSPKAETSIN*TKSWGPGASPP Trigger: CGGAGGGGATGCTCCAGGACCCCAGGACTTTGTGCAGTTGATGCTCGTTTCCGCCTTCGGGCTGTGCAGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408931.4 |
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| CDS CCA 72 bp | AGAAGTGTCAGCTCCAACGACTCCAGAGCTGCACACTaGCCTCTATTCCCCACCGCAAAGCCCCAGAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RSVSSNDSRAAH*PLFPTAKPQSR Trigger: GCGGCTCTGGGGCTTTGCGGTGGGGAATAGAGGCCAGTGTGCAGCTCTGGAGTCGTTGGAGCTGACACTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408931.4 |
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| CDS GCA 72 bp | GGACTCCAGAAGTGTCAGCTCCAACGACTCCAGAGCTaGACACTGGCCTCTATTCCCCACCGCAAAGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: GLQKCQLQRLQS*TLASIPHRKAP Trigger: TGGGGCTTTGCGGTGGGGAATAGAGGCCAGTGTGCAGCTCTGGAGTCGTTGGAGCTGACACTTCTGGAGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408931.4 |
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| CDS CCA 72 bp | TGTCCACAGGGACGATGTCCATCAGGACTATGTACTTaGCCTCAGGATCCACCCCCGAAAAGGACACCCGGA | + |
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Preference number: 6 (lower is better) Translates to: CPQGRCPSGLCT*PQDPPPKRTPG Trigger: TCCGGGTGTCCTTTTCGGGGGTGGATCCTGAGGCCAAGTACATAGTCCTGATGGACATCGTCCCTGTGGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000408931.4 ENST00000492961.1 |
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| CDS CAA 72 bp | TTGTCCACAGGGACGATGTCCATCAGGACTATGTACTaGGCCTCAGGATCCACCCCCGAAAAGGACACCCGG | + |
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Preference number: 6 (lower is better) Translates to: LSTGTMSIRTMY*ASGSTPEKDTR Trigger: CCGGGTGTCCTTTTCGGGGGTGGATCCTGAGGCCAAGTACATAGTCCTGATGGACATCGTCCCTGTGGACAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000408931.4 ENST00000492961.1 |
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| CDS CCA 72 bp | CTCAGGATCCACCCCCGAAAAGGACACCCGGATGGTTaGAAACATCCTCCTGCCCGACTTGGTGATGATCAT | + |
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Preference number: 6 (lower is better) Translates to: LRIHPRKGHPDG*KHPPARLGDDH Trigger: ATGATCATCACCAAGTCGGGCAGGAGGATGTTTCCAACCATCCGGGTGTCCTTTTCGGGGGTGGATCCTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000408931.4 ENST00000492961.1 |
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| CDS CAA 90 bp | TACCTCTTGTTGTCCACAGGGACGATGTCCATCAGGACTATGTACTaGGCCTCAGGATCCACCCCCGAAAAGGACACCCGGATGGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: YLLLSTGTMSIRTMY*ASGSTPEKDTRMVG Trigger: TCCAACCATCCGGGTGTCCTTTTCGGGGGTGGATCCTGAGGCCAAGTACATAGTCCTGATGGACATCGTCCCTGTGGACAACAAGAGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000408931.4 ENST00000492961.1 |
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