RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBX19 (Homo sapiens)

Ensembl gene IDs: ENSG00000143178

Ensembl transcript IDs: ENST00000367821.8, ENST00000431969.5, ENST00000441464.1, ENST00000465440.1

Found 315 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATAGATCAGACATATCTCAGCAGATCAGATGTTGGATGCAGGGAGTaGCGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGG +
Preference number: 1 (lower is better)
Translates to: IDQTYLSRSDVGCRE*RFSQALGGGSDSHR
Trigger: CCTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTGCATCCAACATCTGATCTGCTGAGATATGTCTGATCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR CCA 90 bp GTTTATTGGGCACCTACAATAGGCAAGGCACAGTACCAGCTGCTGTaGGTTACAAAGACAAGAAGGCTAGGCCTCACCCTCGAGAGGCTT +
Preference number: 1 (lower is better)
Translates to: VYWAPTIGKAQYQLL*VTKTRRLGLTLERL
Trigger: AAGCCTCTCGAGGGTGAGGCCTAGCCTTCTTGTCTTTGTAACCCACAGCAGCTGGTACTGTGCCTTGCCTATTGTAGGTGCCCAATAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR TCA 90 bp AACCCACCTCCACCTCCAGCTAGTGGGAAGGGAGATTCCACAGTCTaGCTCACTAGATCAGTTGATGGGGTTTCTAAGCACTCTACACAT +
Preference number: 1 (lower is better)
Translates to: NPPPPPASGKGDSTV*LTRSVDGVSKHSTH
Trigger: ATGTGTAGAGTGCTTAGAAACCCCATCAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTGGAGGTGGAGGTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
3UTR GCA 90 bp ATAGAGGTGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATGCCTaGCTTGACCAATACATAGGAGGCCAACAGGATAACAGAGGGACC +
Preference number: 1 (lower is better)
Translates to: IEVGKCNECSENRDA*LDQYIGGQQDNRGT
Trigger: GGTCCCTCTGTTATCCTGTTGGCCTCCTATGTATTGGTCAAGGCAGGCATCTCTGTTCTCTGAACATTCATTGCACTTTCCCACCTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR CCA 90 bp GAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGATaGTACTTAACAAACTTCTGTCACCTAAGCATGGCAAGAATAAGC +
Preference number: 1 (lower is better)
Translates to: EAFQNDLRIRGRAQG*YLTNFCHLSMARIS
Trigger: GCTTATTCTTGCCATGCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
3UTR-3UTR CCA 90 bp CAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGGTGCCTAAGCTGGGGAAGTaGTTTCAGGCCAGATGGTGT +
Preference number: 2 (lower is better)
Translates to: QGVTFQPGSGRWVGFAQVPKLGK*FQARWC
Trigger: ACACCATCTGGCCTGAAACCACTTCCCCAGCTTAGG...CACCTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR-3UTR TCA 90 bp CAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGGTGGTAATGGTGAACCATTaGAGGTTTCTGAGCAGAGGA +
Preference number: 2 (lower is better)
Translates to: QGVTFQPGSGRWVGFAQVVMVNH*RFLSRG
Trigger: TCCTCTGCTCAGAAACCTTCAATGGTTCACCATTAC...CACCTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR-3UTR TCA 90 bp ATGCAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGAGCAGAGGAGTGACATaGCTTCATTTCCACAAGTCT +
Preference number: 2 (lower is better)
Translates to: MQGVTFQPGSGRWVGFAQSRGVT*LHFHKS
Trigger: AGACTTGTGGAAATGAAGTCATGTCACTCCTCTGCT...CTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR-3UTR TCA 90 bp ATGCAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGGTAATGGTGAACCATTaGAGGTTTCTGAGCAGAGGA +
Preference number: 2 (lower is better)
Translates to: MQGVTFQPGSGRWVGFAQVMVNH*RFLSRG
Trigger: TCCTCTGCTCAGAAACCTTCAATGGTTCACCATTAC...CTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR-3UTR CCA 90 bp CAAGGCACAGTACCAGCTGCTGTGGGTTACAAAGACAAGAAGGCTAGGCCTCACCCTAAGCTGGGGAAGTaGTTTCAGGCCAGATGGTGT +
Preference number: 2 (lower is better)
Translates to: QGTVPAAVGYKDKKARPHPKLGK*FQARWC
Trigger: ACACCATCTGGCCTGAAACCACTTCCCCAGCTTAGG...GTGAGGCCTAGCCTTCTTGTCTTTGTAACCCACAGCAGCTGGTACTGTGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR-3UTR GCA 90 bp ATGCAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGATAGAGGTGGGAAAGTaGAATGAATGTTCAGAGAAC +
Preference number: 2 (lower is better)
Translates to: MQGVTFQPGSGRWVGFAQIEVGK*NECSEN
Trigger: GTTCTCTGAACATTCATTGCACTTTCCCACCTCTAT...CTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR-3UTR GCA 90 bp CAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGATGGGGATGGAAGGATCGCTGTaGAAAGAGGCTCCTAGGATC +
Preference number: 2 (lower is better)
Translates to: QLVGREIPQSDSLDQLMGMEGSL*KEAPRI
Trigger: GATCCTAGGAGCCTCTTTGCACAGCGATCCTTCCAT...CCCCATCAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
3UTR CAA 90 bp CAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTaGATGGGGTTTCTAAGCACTCTACACATGGAAGGATCGCTGTGC +
Preference number: 2 (lower is better)
Translates to: QLVGREIPQSDSLDQ*MGFLSTLHMEGSLC
Trigger: GCACAGCGATCCTTCCATGTGTAGAGTGCTTAGAAACCCCATCAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
3UTR-3UTR TCA 90 bp CTCTATGGCTTACACCCCATCCTGGTCTCAAAGCAGAAGTGTGAACCTGAGCCCGGAGATTCCACAGTCTaGCTCACTAGATCAGTTGAT +
Preference number: 2 (lower is better)
Translates to: LYGLHPILVSKQKCEPEPGDSTV*LTRSVD
Trigger: ATCAACTGATCTAGTGAGTCAGACTGTGGAATCTCC...GGGCTCAGGTTCACACTTCTGCTTTGAGACCAGGATGGGGTGTAAGCCATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
3UTR-3UTR TCA 90 bp CAAGGCACAGTACCAGCTGCTGTGGGTTACAAAGACAAGAAGGCTAGGCCTCACCCACAGAAAAGGAAGTaGGGCTTTCCAGAACGATTT +
Preference number: 2 (lower is better)
Translates to: QGTVPAAVGYKDKKARPHPQKRK*GFPERF
Trigger: AAATCGTTCTGGAAAGCCTCACTTCCTTTTCTGTGG...GTGAGGCCTAGCCTTCTTGTCTTTGTAACCCACAGCAGCTGGTACTGTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR-3UTR CCA 90 bp GTGAACCTGAGCCCTGTGGCCACACATACTTTCCAGGCTTCACAAAGCAGGAAGGGCAGGGCACAAGGATaGTACTTAACAAACTTCTGT +
Preference number: 2 (lower is better)
Translates to: VNLSPVATHTFQASQSRKGRAQG*YLTNFC
Trigger: ACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCC...CTTCCTGCTTTGTGAAGCCTGGAAAGTATGTGTGGCCACAGGGCTCAGGTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
3UTR-3UTR TCA 90 bp ATAGGCAAGGCACAGTACCAGCTGCTGTGGGTTACAAAGACAAGAAGGCTAGGCGGAGATTCCACAGTCTaGCTCACTAGATCAGTTGAT +
Preference number: 2 (lower is better)
Translates to: IGKAQYQLLWVTKTRRLGGDSTV*LTRSVD
Trigger: ATCAACTGATCTAGTGAGTCAGACTGTGGAATCTCC...GCCTAGCCTTCTTGTCTTTGTAACCCACAGCAGCTGGTACTGTGCCTTGCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR-3UTR TCA 90 bp AATGAGGTGAGCTCTATGGCAGAGGCAAAAACAACGGGAGAACAGCGAGCAGAGCCACAGAAAAGGAAGTaGGGCTTTCCAGAACGATTT +
Preference number: 2 (lower is better)
Translates to: NEVSSMAEAKTTGEQRAEPQKRK*GFPERF
Trigger: AAATCGTTCTGGAAAGCCTCACTTCCTTTTCTGTGG...CTCTGCTCGCTGTTCTCCCGTTGTTTTTGCCTCTGCCATAGAGCTCACCTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR-3UTR GCA 90 bp CAAGGCACAGTACCAGCTGCTGTGGGTTACAAAGACAAGAAGGCTAGGCCTCACATAGAGGTGGGAAAGTaGAATGAATGTTCAGAGAAC +
Preference number: 2 (lower is better)
Translates to: QGTVPAAVGYKDKKARPHIEVGK*NECSEN
Trigger: GTTCTCTGAACATTCATTGCACTTTCCCACCTCTAT...GTGAGGCCTAGCCTTCTTGTCTTTGTAACCCACAGCAGCTGGTACTGTGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR-3UTR CCA 90 bp CGAGAGGCTTACAGTCTAATAGGGAGAGACACACTCACAGGTAACAAAAATACACAGAGGGACCTAAGCTaGGGAAGTGGTTTCAGGCCA +
Preference number: 2 (lower is better)
Translates to: REAYSLIGRDTLTGNKNTQRDLS*GSGFRP
Trigger: TGGCCTGAAACCACTTCCCCAGCTTAGGTCCCTCTG...TGTATTTTTGTTACCTGTGAGTGTGTCTCTCCCTATTAGACTGTAAGCCTCTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR-3UTR GCA 90 bp TGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATGCCTGCCTTGACCAATACAATGGAAGGATCGCTGTaGAAAGAGGCTCCTAGGATC +
Preference number: 2 (lower is better)
Translates to: WESAMNVQRTEMPALTNTMEGSL*KEAPRI
Trigger: GATCCTAGGAGCCTCTTTGCACAGCGATCCTTCCAT...TGTATTGGTCAAGGCAGGCATCTCTGTTCTCTGAACATTCATTGCACTTTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR-3UTR CCA 90 bp TGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATGCCTGCCTTGACCAATACAATCTACCACCCAGGCTaGAGTGCAATGCCACAATCA +
Preference number: 2 (lower is better)
Translates to: WESAMNVQRTEMPALTNTIYHPG*SAMPQS
Trigger: TGATTGTGGCATTGCACTCCAGCCTGGGTGGTAGAT...TGTATTGGTCAAGGCAGGCATCTCTGTTCTCTGAACATTCATTGCACTTTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR CAA 90 bp TTGCACCTTCTCCACAGAAAAGGAAGTGAGGCTTTCCAGAACGATTaGAGAATAAGAGGCAGGGCACAAGGATGGTACTTAACAAACTTC +
Preference number: 2 (lower is better)
Translates to: LHLLHRKGSEAFQND*RIRGRAQGWYLTNF
Trigger: GAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTTTCTGTGGAGAAGGTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
3UTR-3UTR TCA 90 bp AGAAAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGAGATTCCACAGTCTaGCTCACTAGATCAGTTGAT +
Preference number: 2 (lower is better)
Translates to: RKGSEAFQNDLRIRGRAQGDSTV*LTRSVD
Trigger: ATCAACTGATCTAGTGAGTCAGACTGTGGAATCTCC...TTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
3UTR-3UTR TCA 90 bp TGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATGCCTGCCTTGACCAATACAGGCCTCCAAAAGGGCTaGGATTATAGGCTTAAACTA +
Preference number: 2 (lower is better)
Translates to: WESAMNVQRTEMPALTNTGLQKG*DYRLKL
Trigger: TAGTTTAAGCCTATAATCTCAGCCCTTTTGGAGGCC...TGTATTGGTCAAGGCAGGCATCTCTGTTCTCTGAACATTCATTGCACTTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR-3UTR CCA 90 bp CACAGGCAAGGTATAGAGGTGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATGTTAACCTTACTCTATaGCTTACACCCCATCCTGGT +
Preference number: 2 (lower is better)
Translates to: HRQGIEVGKCNECSENRDVNLTL*LTPHPG
Trigger: ACCAGGATGGGGTGTAAGCCATAGAGTAAGGTTAAC...ATCTCTGTTCTCTGAACATTCATTGCACTTTCCCACCTCTATACCTTGCCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR-3UTR CAA 90 bp ATGCAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGGACTCACTAGATCAGTaGATGGGGTTTCTAAGCACT +
Preference number: 3 (lower is better)
Translates to: MQGVTFQPGSGRWVGFAQDSLDQ*MGFLST
Trigger: AGTGCTTAGAAACCCCATCAACTGATCTAGTGAGTC...CTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR CCA 72 bp GCACCTACAATAGGCAAGGCACAGTACCAGCTGCTGTaGGTTACAAAGACAAGAAGGCTAGGCCTCACCCTC +
Preference number: 3 (lower is better)
Translates to: APTIGKAQYQLL*VTKTRRLGLTL
Trigger: GAGGGTGAGGCCTAGCCTTCTTGTCTTTGTAACCCACAGCAGCTGGTACTGTGCCTTGCCTATTGTAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR-3UTR CAA 90 bp ATGCAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGGCTCATTTAACAGCTTaGCACCTTCTCCACAGAAAA +
Preference number: 3 (lower is better)
Translates to: MQGVTFQPGSGRWVGFAQAHLTA*HLLHRK
Trigger: TTTTCTGTGGAGAAGGTGCAAAGCTGTTAAATGAGC...CTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR-3UTR CAA 90 bp CAAGGCACAGTACCAGCTGCTGTGGGTTACAAAGACAAGAAGGCTAGGCCTCACGCTTTCCAGAACGATTaGAGAATAAGAGGCAGGGCA +
Preference number: 3 (lower is better)
Translates to: QGTVPAAVGYKDKKARPHAFQND*RIRGRA
Trigger: TGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGC...GTGAGGCCTAGCCTTCTTGTCTTTGTAACCCACAGCAGCTGGTACTGTGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR-3UTR CAA 90 bp CTCTATGGCTTACACCCCATCCTGGTCTCAAAGCAGAAGTGTGAACCTGAGCCCGCTTTCCAGAACGATTaGAGAATAAGAGGCAGGGCA +
Preference number: 3 (lower is better)
Translates to: LYGLHPILVSKQKCEPEPAFQND*RIRGRA
Trigger: TGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGC...GGGCTCAGGTTCACACTTCTGCTTTGAGACCAGGATGGGGTGTAAGCCATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
3UTR TCA 72 bp CCACCTCCAGCTAGTGGGAAGGGAGATTCCACAGTCTaGCTCACTAGATCAGTTGATGGGGTTTCTAAGCAC +
Preference number: 3 (lower is better)
Translates to: PPPASGKGDSTV*LTRSVDGVSKH
Trigger: GTGCTTAGAAACCCCATCAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTGGAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
3UTR-3UTR CAA 90 bp CAAGGCACAGTACCAGCTGCTGTGGGTTACAAAGACAAGAAGGCTAGGCCTCACGACTCACTAGATCAGTaGATGGGGTTTCTAAGCACT +
Preference number: 3 (lower is better)
Translates to: QGTVPAAVGYKDKKARPHDSLDQ*MGFLST
Trigger: AGTGCTTAGAAACCCCATCAACTGATCTAGTGAGTC...GTGAGGCCTAGCCTTCTTGTCTTTGTAACCCACAGCAGCTGGTACTGTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR-3UTR CAA 90 bp AATGAGGTGAGCTCTATGGCAGAGGCAAAAACAACGGGAGAACAGCGAGCAGAGGCTCATTTAACAGCTTaGCACCTTCTCCACAGAAAA +
Preference number: 3 (lower is better)
Translates to: NEVSSMAEAKTTGEQRAEAHLTA*HLLHRK
Trigger: TTTTCTGTGGAGAAGGTGCAAAGCTGTTAAATGAGC...CTCTGCTCGCTGTTCTCCCGTTGTTTTTGCCTCTGCCATAGAGCTCACCTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR-3UTR CAA 90 bp TGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATGCCTGCCTTGACCAATACAAGACAGGCTCTCACTTaGTTGCACAAGCTGGTCTCG +
Preference number: 3 (lower is better)
Translates to: WESAMNVQRTEMPALTNTRQALT*LHKLVS
Trigger: CGAGACCAGCTTGTGCAACAAAGTGAGAGCCTGTCT...TGTATTGGTCAAGGCAGGCATCTCTGTTCTCTGAACATTCATTGCACTTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR-3UTR CAA 90 bp CGAGAGGCTTACAGTCTAATAGGGAGAGACACACTCACAGGTAACAAAAATACATCAGCAGATCAGATGTaGGATGCAGGGAGTGACGTT +
Preference number: 3 (lower is better)
Translates to: REAYSLIGRDTLTGNKNTSADQM*DAGSDV
Trigger: AACGTCACTCCCTGCATCCAACATCTGATCTGCTGA...TGTATTTTTGTTACCTGTGAGTGTGTCTCTCCCTATTAGACTGTAAGCCTCTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR GCA 72 bp GGAAAGTGCAATGAATGTTCAGAGAACAGAGATGCCTaGCTTGACCAATACATAGGAGGCCAACAGGATAAC +
Preference number: 3 (lower is better)
Translates to: GKCNECSENRDA*LDQYIGGQQDN
Trigger: GTTATCCTGTTGGCCTCCTATGTATTGGTCAAGGCAGGCATCTCTGTTCTCTGAACATTCATTGCACTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR CCA 72 bp CAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGATaGTACTTAACAAACTTCTGTCACCTAAGCATGGCA +
Preference number: 3 (lower is better)
Translates to: QNDLRIRGRAQG*YLTNFCHLSMA
Trigger: TGCCATGCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
3UTR-3UTR CAA 90 bp AATAAGAGGCAGGGCACAAGGATGGTACTTAACAAACTTCTGTCACCTAAGCATGACTCACTAGATCAGTaGATGGGGTTTCTAAGCACT +
Preference number: 3 (lower is better)
Translates to: NKRQGTRMVLNKLLSPKHDSLDQ*MGFLST
Trigger: AGTGCTTAGAAACCCCATCAACTGATCTAGTGAGTC...ATGCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp ATGCAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGGTGGCTGGAGACCTCTaGCTTGCCAGCGGGCACCCA +
Preference number: 4 (lower is better)
Translates to: MQGVTFQPGSGRWVGFAQVAGDL*LASGHP
Trigger: TGGGTGCCCGCTGGCAAGCCAGAGGTCTCCAGCCAC...CTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR TCA 90 bp ATGCAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGCTCCGGCACCATTGCTaGTGGTCCACAGGCACGGGT +
Preference number: 4 (lower is better)
Translates to: MQGVTFQPGSGRWVGFAQLRHHC*WSTGTG
Trigger: ACCCGTGCCTGTGGACCATCAGCAATGGTGCCGGAG...CTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR GCA 90 bp ATGCAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGGAGGAAGGAGAATGGTaGCCACCCGCTCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: MQGVTFQPGSGRWVGFAQEEGEW*PPAPGP
Trigger: TGGCCCAGGAGCGGGTGGGCACCATTCTCCTTCCTC...CTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp CTCTATGGCTTACACCCCATCCTGGTCTCAAAGCAGAAGTGTGAACCTGAGCCCCCGGGCCTGGCCCACTaGGGCCTCCGGCACCATTGC +
Preference number: 4 (lower is better)
Translates to: LYGLHPILVSKQKCEPEPPGLAH*GLRHHC
Trigger: GCAATGGTGCCGGAGGCCCCAGTGGGCCAGGCCCGG...GGGCTCAGGTTCACACTTCTGCTTTGAGACCAGGATGGGGTGTAAGCCATAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp GTGAACCTGAGCCCTGTGGCCACACATACTTTCCAGGCTTCACAAAGCAGGAAGGTGCCCACCCGCTCCTaGGCCACCCCAGCCCGCGAA +
Preference number: 4 (lower is better)
Translates to: VNLSPVATHTFQASQSRKVPTRS*ATPARE
Trigger: TTCGCGGGCTGGGGTGGCCCAGGAGCGGGTGGGCAC...CTTCCTGCTTTGTGAAGCCTGGAAAGTATGTGTGGCCACAGGGCTCAGGTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR GCA 90 bp CAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGATGGGGCCTGGGGTGCTGGCGTaGACCTCCGGGCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: QLVGREIPQSDSLDQLMGPGVLA*TSGPGP
Trigger: TGGGCCAGGCCCGGAGGTGCACGCCAGCACCCCAGG...CCCCATCAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGGTGGTAGGGGCTGGGCCCTaGATTGATTGGTCCGTTGGT +
Preference number: 4 (lower is better)
Translates to: QGVTFQPGSGRWVGFAQVVGAGP*IDWSVG
Trigger: ACCAACGGACCAATCAATCCAGGGCCCAGCCCCTAC...CACCTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp CACCTCCAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGCCGGGCCTGGCCCACTaGGGCCTCCGGCACCATTGC +
Preference number: 4 (lower is better)
Translates to: HLQLVGREIPQSDSLDQLPGLAH*GLRHHC
Trigger: GCAATGGTGCCGGAGGCCCCAGTGGGCCAGGCCCGG...CAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTGGAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp ATGCAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGAGTGAGGAAGGAGAATaGTGCCCACCCGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: MQGVTFQPGSGRWVGFAQSEEGE*CPPAPG
Trigger: CCCAGGAGCGGGTGGGCACCATTCTCCTTCCTCACT...CTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR TCA 90 bp CAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGGTGACGTACTTCCAGCGGTaGCTGTCCGTAGGGACAAAG +
Preference number: 4 (lower is better)
Translates to: QGVTFQPGSGRWVGFAQVTYFQR*LSVGTK
Trigger: CTTTGTCCCTACGGACAGTCACCGCTGGAAGTACGT...CACCTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR GCA 90 bp ATGCAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGACCAGCCGAAGTGGGTaGTTGGGTGGAGAGCACAGA +
Preference number: 4 (lower is better)
Translates to: MQGVTFQPGSGRWVGFAQTSRSG*LGGEHR
Trigger: TCTGTGCTCTCCACCCAAGCACCCACTTCGGCTGGT...CTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR GCA 90 bp ATGCAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGAGGTGGACACAGCAATaGTGGTTAGCGAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: MQGVTFQPGSGRWVGFAQRWTQQ*WLARAP
Trigger: GGGAGCCCTCGCTAACCAGCATTGCTGTGTCCACCT...CTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp GGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGATGGGTGCCCACCCGCTCCTaGGCCACCCCAGCCCGCGAA +
Preference number: 4 (lower is better)
Translates to: GSEAFQNDLRIRGRAQGWVPTRS*ATPARE
Trigger: TTCGCGGGCTGGGGTGGCCCAGGAGCGGGTGGGCAC...CCATCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR TCA 90 bp CAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGGTGGTGCATCCTCCAGGATaGTCTGAAGTTGCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: QGVTFQPGSGRWVGFAQVVHPPG*SEVASP
Trigger: CGGAGAAGCAACTTCAGATCATCCTGGAGGATGCAC...CACCTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR GCA 90 bp CAAGGCACAGTACCAGCTGCTGTGGGTTACAAAGACAAGAAGGCTAGGCCTCACGAAATGCTCCTGGGGTaGTGGCGTGCACCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: QGTVPAAVGYKDKKARPHEMLLG*WRAPPG
Trigger: GCCCGGAGGTGCACGCCAGCACCCCAGGAGCATTTC...GTGAGGCCTAGCCTTCTTGTCTTTGTAACCCACAGCAGCTGGTACTGTGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR GCA 90 bp GTGAACCTGAGCCCTGTGGCCACACATACTTTCCAGGCTTCACAAAGCAGGAAGCAGCCCGCGAAGGGATaGGAGGCCACTGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: VNLSPVATHTFQASQSRKQPAKG*EATAVQ
Trigger: CTGGACAGCAGTGGCCTCGCATCCCTTCGCGGGCTG...CTTCCTGCTTTGTGAAGCCTGGAAAGTATGTGTGGCCACAGGGCTCAGGTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CTAAGCACTCTACACATGGAAGGATCGCTGTGCAAAGAGGCTCCTAGGATCCTGATGCTCCTGGGGTGCTaGCGTGCACCTCCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LSTLHMEGSLCKEAPRILMLLGC*RAPPGL
Trigger: CAGGCCCGGAGGTGCACGCCAGCACCCCAGGAGCAT...CAGGATCCTAGGAGCCTCTTTGCACAGCGATCCTTCCATGTGTAGAGTGCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR TCA 90 bp CAAGGCACAGTACCAGCTGCTGTGGGTTACAAAGACAAGAAGGCTAGGCCTCACGGCTGGGCCCTGGATTaGTTGGTCCGTTGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: QGTVPAAVGYKDKKARPHGWALD*LVRWCG
Trigger: CCCACACCAACGGACCAATCAATCCAGGGCCCAGCC...GTGAGGCCTAGCCTTCTTGTCTTTGTAACCCACAGCAGCTGGTACTGTGCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR GCA 90 bp AAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGACCTGGGGTGCTGGCGTaGACCTCCGGGCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: KGSEAFQNDLRIRGRAQGPGVLA*TSGPGP
Trigger: TGGGCCAGGCCCGGAGGTGCACGCCAGCACCCCAGG...TCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CACCTCCAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGGTGGCTGGAGACCTCTaGCTTGCCAGCGGGCACCCA +
Preference number: 4 (lower is better)
Translates to: HLQLVGREIPQSDSLDQLVAGDL*LASGHP
Trigger: TGGGTGCCCGCTGGCAAGCCAGAGGTCTCCAGCCAC...CAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTGGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp ATGCAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGCCACTGCTGTCCAGGTaGACACAGCAATGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: MQGVTFQPGSGRWVGFAQPLLSR*TQQCWL
Trigger: TAACCAGCATTGCTGTGTCCACCTGGACAGCAGTGG...CTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR TCA 90 bp CACCTCCAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGCTCCGGCACCATTGCTaGTGGTCCACAGGCACGGGT +
Preference number: 4 (lower is better)
Translates to: HLQLVGREIPQSDSLDQLLRHHC*WSTGTG
Trigger: ACCCGTGCCTGTGGACCATCAGCAATGGTGCCGGAG...CAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTGGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR GCA 90 bp GGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGATGGGAAATGCTCCTGGGGTaGTGGCGTGCACCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: GSEAFQNDLRIRGRAQGWEMLLG*WRAPPG
Trigger: GCCCGGAGGTGCACGCCAGCACCCCAGGAGCATTTC...CCATCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CAAGGCACAGTACCAGCTGCTGTGGGTTACAAAGACAAGAAGGCTAGGCCTCACCCACACCAGCCGAAGTaGGTGCTTGGGTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: QGTVPAAVGYKDKKARPHPHQPK*VLGWRA
Trigger: TGCTCTCCACCCAAGCACCCACTTCGGCTGGTGTGG...GTGAGGCCTAGCCTTCTTGTCTTTGTAACCCACAGCAGCTGGTACTGTGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp CTCTATGGCTTACACCCCATCCTGGTCTCAAAGCAGAAGTGTGAACCTGAGCCCCCACACCAGCCGAAGTaGGTGCTTGGGTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: LYGLHPILVSKQKCEPEPPHQPK*VLGWRA
Trigger: TGCTCTCCACCCAAGCACCCACTTCGGCTGGTGTGG...GGGCTCAGGTTCACACTTCTGCTTTGAGACCAGGATGGGGTGTAAGCCATAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR TCA 90 bp GTGAACCTGAGCCCTGTGGCCACACATACTTTCCAGGCTTCACAAAGCAGGAAGGAGCACAGAAGGGGGTaGAGTCACAGCTGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: VNLSPVATHTFQASQSRKEHRRG*SHSWVS
Trigger: GGAAACCCAGCTGTGACTTCACCCCCTTCTGTGCTC...CTTCCTGCTTTGTGAAGCCTGGAAAGTATGTGTGGCCACAGGGCTCAGGTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR GCA 90 bp ATGCAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGGTAATTGGAGTTTCCTaGTGTGCACACTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: MQGVTFQPGSGRWVGFAQVIGVS*CAHSIW
Trigger: CCAGATGGAGTGTGCACAGCAGGAAACTCCAATTAC...CTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR GCA 90 bp CTCTATGGCTTACACCCCATCCTGGTCTCAAAGCAGAAGTGTGAACCTGAGCCCACCAGCCGAAGTGGGTaGTTGGGTGGAGAGCACAGA +
Preference number: 4 (lower is better)
Translates to: LYGLHPILVSKQKCEPEPTSRSG*LGGEHR
Trigger: TCTGTGCTCTCCACCCAAGCACCCACTTCGGCTGGT...GGGCTCAGGTTCACACTTCTGCTTTGAGACCAGGATGGGGTGTAAGCCATAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR GCA 90 bp GTGAACCTGAGCCCTGTGGCCACACATACTTTCCAGGCTTCACAAAGCAGGAAGACCAGCCGAAGTGGGTaGTTGGGTGGAGAGCACAGA +
Preference number: 4 (lower is better)
Translates to: VNLSPVATHTFQASQSRKTSRSG*LGGEHR
Trigger: TCTGTGCTCTCCACCCAAGCACCCACTTCGGCTGGT...CTTCCTGCTTTGTGAAGCCTGGAAAGTATGTGTGGCCACAGGGCTCAGGTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CACCTCCAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGAGACGCAGCTGTGGCTaGAGACCTCTGGCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: HLQLVGREIPQSDSLDQLRRSCG*RPLACQ
Trigger: CTGGCAAGCCAGAGGTCTCCAGCCACAGCTGCGTCT...CAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTGGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp CAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGGTGTTTGTTACCATTCGATaGGCACTTCCAACACGCACT +
Preference number: 4 (lower is better)
Translates to: QGVTFQPGSGRWVGFAQVFVTIR*ALPTRT
Trigger: AGTGCGTGTTGGAAGTGCCCATCGAATGGTAACAAA...CACCTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp ATGCAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGTGTGCACACTCCATCTaGATTGGAAAAGATCCAGCC +
Preference number: 4 (lower is better)
Translates to: MQGVTFQPGSGRWVGFAQCAHSI*IGKDPA
Trigger: GGCTGGATCTTTTCCAATCCAGATGGAGTGTGCACA...CTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR CCA 90 bp CAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGATGGGGGAGGAGAAATGCTCCTaGGGTGCTGGCGTGCACCTC +
Preference number: 4 (lower is better)
Translates to: QLVGREIPQSDSLDQLMGEEKCS*GAGVHL
Trigger: GAGGTGCACGCCAGCACCCCAGGAGCATTTCTCCTC...CCCCATCAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp AATGAGGTGAGCTCTATGGCAGAGGCAAAAACAACGGGAGAACAGCGAGCAGAGCCACACCAGCCGAAGTaGGTGCTTGGGTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: NEVSSMAEAKTTGEQRAEPHQPK*VLGWRA
Trigger: TGCTCTCCACCCAAGCACCCACTTCGGCTGGTGTGG...CTCTGCTCGCTGTTCTCCCGTTGTTTTTGCCTCTGCCATAGAGCTCACCTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp CTCTATGGCTTACACCCCATCCTGGTCTCAAAGCAGAAGTGTGAACCTGAGCCCTGGACACAGCAATGCTaGTTAGCGAGGGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LYGLHPILVSKQKCEPEPWTQQC*LARAPP
Trigger: TGGGGGAGCCCTCGCTAACCAGCATTGCTGTGTCCA...GGGCTCAGGTTCACACTTCTGCTTTGAGACCAGGATGGGGTGTAAGCCATAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CGAGAGGCTTACAGTCTAATAGGGAGAGACACACTCACAGGTAACAAAAATACAGTGCCCACCCGCTCCTaGGCCACCCCAGCCCGCGAA +
Preference number: 4 (lower is better)
Translates to: REAYSLIGRDTLTGNKNTVPTRS*ATPARE
Trigger: TTCGCGGGCTGGGGTGGCCCAGGAGCGGGTGGGCAC...TGTATTTTTGTTACCTGTGAGTGTGTCTCTCCCTATTAGACTGTAAGCCTCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR TCA 90 bp CAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGATGGGGGAGCACAGAAGGGGGTaGAGTCACAGCTGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: QLVGREIPQSDSLDQLMGEHRRG*SHSWVS
Trigger: GGAAACCCAGCTGTGACTTCACCCCCTTCTGTGCTC...CCCCATCAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR TCA 90 bp ATGCAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGGGAGATTCCACAGTCTaGCTCACTAGATCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: MQGVTFQPGSGRWVGFAQGDSTV*LTRSVD
Trigger: ATCAACTGATCTAGTGAGTCAGACTGTGGAATCTCC...CTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR GCA 90 bp CTTAACAAACTTCTGTCACCTAAGCATGGCAAGAATAAGCTGCAGAGAAAATGGCCTGGGGTGCTGGCGTaGACCTCCGGGCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LNKLLSPKHGKNKLQRKWPGVLA*TSGPGP
Trigger: TGGGCCAGGCCCGGAGGTGCACGCCAGCACCCCAGG...CCATTTTCTCTGCAGCTTATTCTTGCCATGCTTAGGTGACAGAAGTTTGTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR GCA 90 bp AAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGAGAAATGCTCCTGGGGTaGTGGCGTGCACCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: KGSEAFQNDLRIRGRAQGEMLLG*WRAPPG
Trigger: GCCCGGAGGTGCACGCCAGCACCCCAGGAGCATTTC...TCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR GCA 90 bp CTAAGCACTCTACACATGGAAGGATCGCTGTGCAAAGAGGCTCCTAGGATCCTGAGGTGGACACAGCAATaGTGGTTAGCGAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LSTLHMEGSLCKEAPRILRWTQQ*WLARAP
Trigger: GGGAGCCCTCGCTAACCAGCATTGCTGTGTCCACCT...CAGGATCCTAGGAGCCTCTTTGCACAGCGATCCTTCCATGTGTAGAGTGCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CACCTCCAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGGTAGGGGCTGGGCCCTaGATTGATTGGTCCGTTGGT +
Preference number: 4 (lower is better)
Translates to: HLQLVGREIPQSDSLDQLVGAGP*IDWSVG
Trigger: ACCAACGGACCAATCAATCCAGGGCCCAGCCCCTAC...CAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTGGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CAGTCTGACTCACTAGATCAGTTGATGGGGTTTCTAAGCACTCTACACATGGAAATGCTCCTGGGGTGCTaGCGTGCACCTCCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: QSDSLDQLMGFLSTLHMEMLLGC*RAPPGL
Trigger: CAGGCCCGGAGGTGCACGCCAGCACCCCAGGAGCAT...TTCCATGTGTAGAGTGCTTAGAAACCCCATCAACTGATCTAGTGAGTCAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGATGGGGTGGACACAGCAATGCTaGTTAGCGAGGGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: QLVGREIPQSDSLDQLMGWTQQC*LARAPP
Trigger: TGGGGGAGCCCTCGCTAACCAGCATTGCTGTGTCCA...CCCCATCAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp GGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGATGGAGTGAGGAAGGAGAATaGTGCCCACCCGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GSEAFQNDLRIRGRAQGWSEEGE*CPPAPG
Trigger: CCCAGGAGCGGGTGGGCACCATTCTCCTTCCTCACT...CCATCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR TCA 90 bp AAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGAGGCTGGGCCCTGGATTaGTTGGTCCGTTGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: KGSEAFQNDLRIRGRAQGGWALD*LVRWCG
Trigger: CCCACACCAACGGACCAATCAATCCAGGGCCCAGCC...TCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR GCA 90 bp CACCTCCAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGGCAGATGAGAAACAGTaGCATCGCTGGGCTTCCGAG +
Preference number: 4 (lower is better)
Translates to: HLQLVGREIPQSDSLDQLADEKQ*HRWASE
Trigger: CTCGGAAGCCCAGCGATGGCACTGTTTCTCATCTGC...CAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTGGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR GCA 90 bp AGAATAAGAGGCAGGGCACAAGGATGGTACTTAACAAACTTCTGTCACCTAAGCCAGCCCGCGAAGGGATaGGAGGCCACTGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RIRGRAQGWYLTNFCHLSQPAKG*EATAVQ
Trigger: CTGGACAGCAGTGGCCTCGCATCCCTTCGCGGGCTG...GCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR GCA 90 bp AAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGAGAGGAAGGAGAATGGTaGCCACCCGCTCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: KGSEAFQNDLRIRGRAQGEEGEW*PPAPGP
Trigger: TGGCCCAGGAGCGGGTGGGCACCATTCTCCTTCCTC...TCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGATGGGGTGCTGGCATGGGGTGTaGAGGATAAGGAAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: QLVGREIPQSDSLDQLMGCWHGV*RIRKSS
Trigger: GCTGGACTTCCTTATCCTCCACACCCCATGCCAGCA...CCCCATCAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CTCTATGGCTTACACCCCATCCTGGTCTCAAAGCAGAAGTGTGAACCTGAGCCCATTGGTCCGTTGGTGTaGGGTACAGACAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: LYGLHPILVSKQKCEPEPIGPLV*GTDRML
Trigger: CAGCATCCTGTCTGTACCCCACACCAACGGACCAAT...GGGCTCAGGTTCACACTTCTGCTTTGAGACCAGGATGGGGTGTAAGCCATAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp GGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGATGGGGGCCCTGGATTGATTaGTCCGTTGGTGTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: GSEAFQNDLRIRGRAQGWGPWID*SVGVGY
Trigger: GTACCCCACACCAACGGACCAATCAATCCAGGGCCC...CCATCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CAAGGCACAGTACCAGCTGCTGTGGGTTACAAAGACAAGAAGGCTAGGCCTCACGCGATCCTCTTACCTTaGCCTCCAAAAGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: QGTVPAAVGYKDKKARPHAILLP*PPKGLR
Trigger: TCTCAGCCCTTTTGGAGGCCAAGGTAAGAGGATCGC...GTGAGGCCTAGCCTTCTTGTCTTTGTAACCCACAGCAGCTGGTACTGTGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp CTCTATGGCTTACACCCCATCCTGGTCTCAAAGCAGAAGTGTGAACCTGAGCCCCCTAAGCTGGGGAAGTaGTTTCAGGCCAGATGGTGT +
Preference number: 4 (lower is better)
Translates to: LYGLHPILVSKQKCEPEPPKLGK*FQARWC
Trigger: ACACCATCTGGCCTGAAACCACTTCCCCAGCTTAGG...GGGCTCAGGTTCACACTTCTGCTTTGAGACCAGGATGGGGTGTAAGCCATAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR TCA 90 bp CTAAGCACTCTACACATGGAAGGATCGCTGTGCAAAGAGGCTCCTAGGATCCTGTGCTTAACCATCCAGTaGGGAAGGAGAATGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LSTLHMEGSLCKEAPRILCLTIQ*GRRMVP
Trigger: GGGCACCATTCTCCTTCCTCACTGGATGGTTAAGCA...CAGGATCCTAGGAGCCTCTTTGCACAGCGATCCTTCCATGTGTAGAGTGCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR TCA 90 bp CACCTCCAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGTGCTTAACCATCCAGTaGGGAAGGAGAATGGTGCCC +
Preference number: 4 (lower is better)
Translates to: HLQLVGREIPQSDSLDQLCLTIQ*GRRMVP
Trigger: GGGCACCATTCTCCTTCCTCACTGGATGGTTAAGCA...CAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTGGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR GCA 90 bp GTGAACCTGAGCCCTGTGGCCACACATACTTTCCAGGCTTCACAAAGCAGGAAGAGCCGTTACCCAACTTaGCTGCTTCTAGCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VNLSPVATHTFQASQSRKSRYPT*LLLASS
Trigger: GGAAGAAGCTAGAAGCAGGCAAGTTGGGTAACGGCT...CTTCCTGCTTTGTGAAGCCTGGAAAGTATGTGTGGCCACAGGGCTCAGGTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR GCA 90 bp CACAGGCAAGGTATAGAGGTGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATCGCTGGGCTTCCGAGTaGCCAGCTCACTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: HRQGIEVGKCNECSENRDRWASE*PAHSWP
Trigger: TGGCCATGAGTGAGCTGGGCACTCGGAAGCCCAGCG...ATCTCTGTTCTCTGAACATTCATTGCACTTTCCCACCTCTATACCTTGCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR GCA 90 bp CAGTCTGACTCACTAGATCAGTTGATGGGGTTTCTAAGCACTCTACACATGGAAGGGATGCGAGGCCACTaGTGTCCAGGTGGACACAGC +
Preference number: 4 (lower is better)
Translates to: QSDSLDQLMGFLSTLHMEGMRGH*CPGGHS
Trigger: GCTGTGTCCACCTGGACAGCAGTGGCCTCGCATCCC...TTCCATGTGTAGAGTGCTTAGAAACCCCATCAACTGATCTAGTGAGTCAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR GCA 90 bp CACAGGCAAGGTATAGAGGTGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATGGGATGCGAGGCCACTaGTGTCCAGGTGGACACAGC +
Preference number: 4 (lower is better)
Translates to: HRQGIEVGKCNECSENRDGMRGH*CPGGHS
Trigger: GCTGTGTCCACCTGGACAGCAGTGGCCTCGCATCCC...ATCTCTGTTCTCTGAACATTCATTGCACTTTCCCACCTCTATACCTTGCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR GCA 90 bp AGAATAAGAGGCAGGGCACAAGGATGGTACTTAACAAACTTCTGTCACCTAAGCGGGATGCGAGGCCACTaGTGTCCAGGTGGACACAGC +
Preference number: 4 (lower is better)
Translates to: RIRGRAQGWYLTNFCHLSGMRGH*CPGGHS
Trigger: GCTGTGTCCACCTGGACAGCAGTGGCCTCGCATCCC...GCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR GCA 90 bp AATAAGAGGCAGGGCACAAGGATGGTACTTAACAAACTTCTGTCACCTAAGCATCAGCCCGCGAAGGGATaGGAGGCCACTGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: NKRQGTRMVLNKLLSPKHQPAKG*EATAVQ
Trigger: CTGGACAGCAGTGGCCTCGCATCCCTTCGCGGGCTG...ATGCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp GTGAACCTGAGCCCTGTGGCCACACATACTTTCCAGGCTTCACAAAGCAGGAAGGGAGAGAAGATACCCTaGCTCTTGCCTAAGCTCCTA +
Preference number: 4 (lower is better)
Translates to: VNLSPVATHTFQASQSRKGEKIP*LLPKLL
Trigger: TAGGAGCTTAGGCAAGAGCCAGGGTATCTTCTCTCC...CTTCCTGCTTTGTGAAGCCTGGAAAGTATGTGTGGCCACAGGGCTCAGGTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR CCA 90 bp CACCTCCAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGGACAGGATGCTGGCATaGGGTGTGGAGGATAAGGAA +
Preference number: 4 (lower is better)
Translates to: HLQLVGREIPQSDSLDQLDRMLA*GVEDKE
Trigger: TTCCTTATCCTCCACACCCCATGCCAGCATCCTGTC...CAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTGGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CTAAGCACTCTACACATGGAAGGATCGCTGTGCAAAGAGGCTCCTAGGATCCTGGACAGGATGCTGGCATaGGGTGTGGAGGATAAGGAA +
Preference number: 4 (lower is better)
Translates to: LSTLHMEGSLCKEAPRILDRMLA*GVEDKE
Trigger: TTCCTTATCCTCCACACCCCATGCCAGCATCCTGTC...CAGGATCCTAGGAGCCTCTTTGCACAGCGATCCTTCCATGTGTAGAGTGCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CTTAACAAACTTCTGTCACCTAAGCATGGCAAGAATAAGCTGCAGAGAAAATGGATGCTCCTGGGGTGCTaGCGTGCACCTCCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LNKLLSPKHGKNKLQRKWMLLGC*RAPPGL
Trigger: CAGGCCCGGAGGTGCACGCCAGCACCCCAGGAGCAT...CCATTTTCTCTGCAGCTTATTCTTGCCATGCTTAGGTGACAGAAGTTTGTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp AAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGAGCCGAAGTGGGTGCTTaGGTGGAGAGCACAGAAGGG +
Preference number: 4 (lower is better)
Translates to: KGSEAFQNDLRIRGRAQGAEVGA*VESTEG
Trigger: CCCTTCTGTGCTCTCCACCCAAGCACCCACTTCGGC...TCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CTAAGCACTCTACACATGGAAGGATCGCTGTGCAAAGAGGCTCCTAGGATCCTGGCGATCCTCTTACCTTaGCCTCCAAAAGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LSTLHMEGSLCKEAPRILAILLP*PPKGLR
Trigger: TCTCAGCCCTTTTGGAGGCCAAGGTAAGAGGATCGC...CAGGATCCTAGGAGCCTCTTTGCACAGCGATCCTTCCATGTGTAGAGTGCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR TCA 90 bp AATGAGGTGAGCTCTATGGCAGAGGCAAAAACAACGGGAGAACAGCGAGCAGAGCCTAAGCTCCTAGGATaGCACCCCTTAAAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: NEVSSMAEAKTTGEQRAEPKLLG*HPLKVS
Trigger: GGAGACTTTTAAGGGGTGTCATCCTAGGAGCTTAGG...CTCTGCTCGCTGTTCTCCCGTTGTTTTTGCCTCTGCCATAGAGCTCACCTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR TCA 90 bp CTCTATGGCTTACACCCCATCCTGGTCTCAAAGCAGAAGTGTGAACCTGAGCCCGGTACGTCTCTTAGGTaGTTTCTTTCCTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: LYGLHPILVSKQKCEPEPGTSLR*FLSLAS
Trigger: GGATGCCAAGGAAAGAAATCACCTAAGAGACGTACC...GGGCTCAGGTTCACACTTCTGCTTTGAGACCAGGATGGGGTGTAAGCCATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR TCA 90 bp GTGAACCTGAGCCCTGTGGCCACACATACTTTCCAGGCTTCACAAAGCAGGAAGGGTACGTCTCTTAGGTaGTTTCTTTCCTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: VNLSPVATHTFQASQSRKGTSLR*FLSLAS
Trigger: GGATGCCAAGGAAAGAAATCACCTAAGAGACGTACC...CTTCCTGCTTTGTGAAGCCTGGAAAGTATGTGTGGCCACAGGGCTCAGGTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR GCA 90 bp CACCTCCAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGACTTCCTTGAATCTCTaGCAGAGAGGTGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: HLQLVGREIPQSDSLDQLTSLNL*QRGASS
Trigger: GGAGGATGCACCTCTCTGGCAGAGATTCAAGGAAGT...CAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTGGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR GCA 90 bp GTGAACCTGAGCCCTGTGGCCACACATACTTTCCAGGCTTCACAAAGCAGGAAGGTAATTGGAGTTTCCTaGTGTGCACACTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: VNLSPVATHTFQASQSRKVIGVS*CAHSIW
Trigger: CCAGATGGAGTGTGCACAGCAGGAAACTCCAATTAC...CTTCCTGCTTTGTGAAGCCTGGAAAGTATGTGTGGCCACAGGGCTCAGGTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000441464.1
CDS-3UTR GCA 90 bp CGAGAGGCTTACAGTCTAATAGGGAGAGACACACTCACAGGTAACAAAAATACAGAGGAAGGAGAATGGTaGCCACCCGCTCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: REAYSLIGRDTLTGNKNTEEGEW*PPAPGP
Trigger: TGGCCCAGGAGCGGGTGGGCACCATTCTCCTTCCTC...TGTATTTTTGTTACCTGTGAGTGTGTCTCTCCCTATTAGACTGTAAGCCTCTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR GCA 90 bp CTCTATGGCTTACACCCCATCCTGGTCTCAAAGCAGAAGTGTGAACCTGAGCCCAGGCTCTCACTTTGTTaGACAAGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: LYGLHPILVSKQKCEPEPRLSLC*TSWSRT
Trigger: AGTTCGAGACCAGCTTGTGCAACAAAGTGAGAGCCT...GGGCTCAGGTTCACACTTCTGCTTTGAGACCAGGATGGGGTGTAAGCCATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CAGTCTGACTCACTAGATCAGTTGATGGGGTTTCTAAGCACTCTACACATGGAAAGACGCAGCTGTGGCTaGAGACCTCTGGCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: QSDSLDQLMGFLSTLHMERRSCG*RPLACQ
Trigger: CTGGCAAGCCAGAGGTCTCCAGCCACAGCTGCGTCT...TTCCATGTGTAGAGTGCTTAGAAACCCCATCAACTGATCTAGTGAGTCAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp GGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGATGGATTGGTCCGTTGGTGTaGGGTACAGACAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: GSEAFQNDLRIRGRAQGWIGPLV*GTDRML
Trigger: CAGCATCCTGTCTGTACCCCACACCAACGGACCAAT...CCATCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp AGAAAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGAGGAGAAATGCTCCTaGGGTGCTGGCGTGCACCTC +
Preference number: 4 (lower is better)
Translates to: RKGSEAFQNDLRIRGRAQEEKCS*GAGVHL
Trigger: GAGGTGCACGCCAGCACCCCAGGAGCATTTCTCCTC...TTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CAGTCTGACTCACTAGATCAGTTGATGGGGTTTCTAAGCACTCTACACATGGAAGCCGAAGTGGGTGCTTaGGTGGAGAGCACAGAAGGG +
Preference number: 4 (lower is better)
Translates to: QSDSLDQLMGFLSTLHMEAEVGA*VESTEG
Trigger: CCCTTCTGTGCTCTCCACCCAAGCACCCACTTCGGC...TTCCATGTGTAGAGTGCTTAGAAACCCCATCAACTGATCTAGTGAGTCAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CAGTCTGACTCACTAGATCAGTTGATGGGGTTTCTAAGCACTCTACACATGGAAAGTGAGGAAGGAGAATaGTGCCCACCCGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QSDSLDQLMGFLSTLHMESEEGE*CPPAPG
Trigger: CCCAGGAGCGGGTGGGCACCATTCTCCTTCCTCACT...TTCCATGTGTAGAGTGCTTAGAAACCCCATCAACTGATCTAGTGAGTCAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CTAAGCACTCTACACATGGAAGGATCGCTGTGCAAAGAGGCTCCTAGGATCCTGGCTTACACCCCATCCTaGTCTCAAAGCAGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: LSTLHMEGSLCKEAPRILAYTPS*SQSRSV
Trigger: CACACTTCTGCTTTGAGACCAGGATGGGGTGTAAGC...CAGGATCCTAGGAGCCTCTTTGCACAGCGATCCTTCCATGTGTAGAGTGCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp ATAGGCAAGGCACAGTACCAGCTGCTGTGGGTTACAAAGACAAGAAGGCTAGGCGCTTACACCCCATCCTaGTCTCAAAGCAGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: IGKAQYQLLWVTKTRRLGAYTPS*SQSRSV
Trigger: CACACTTCTGCTTTGAGACCAGGATGGGGTGTAAGC...GCCTAGCCTTCTTGTCTTTGTAACCCACAGCAGCTGGTACTGTGCCTTGCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp ATAGGCAAGGCACAGTACCAGCTGCTGTGGGTTACAAAGACAAGAAGGCTAGGCATCTACCACCCAGGCTaGAGTGCAATGCCACAATCA +
Preference number: 4 (lower is better)
Translates to: IGKAQYQLLWVTKTRRLGIYHPG*SAMPQS
Trigger: TGATTGTGGCATTGCACTCCAGCCTGGGTGGTAGAT...GCCTAGCCTTCTTGTCTTTGTAACCCACAGCAGCTGGTACTGTGCCTTGCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp GGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGATGGCCTAAGCTGGGGAAGTaGTTTCAGGCCAGATGGTGT +
Preference number: 4 (lower is better)
Translates to: GSEAFQNDLRIRGRAQGWPKLGK*FQARWC
Trigger: ACACCATCTGGCCTGAAACCACTTCCCCAGCTTAGG...CCATCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR TCA 90 bp AAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGATCTGCCCGCCTCCATTaGGCTTGTTGGTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: KGSEAFQNDLRIRGRAQGSARLH*ACWSAS
Trigger: TGAAGCTGACCAACAAGCTCAATGGAGGCGGGCAGA...TCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR TCA 90 bp CTCTATGGCTTACACCCCATCCTGGTCTCAAAGCAGAAGTGTGAACCTGAGCCCCCAACACGCACTATGTaGACCTGGGGTTCATATTTA +
Preference number: 4 (lower is better)
Translates to: LYGLHPILVSKQKCEPEPPTRTM*TWGSYL
Trigger: TAAATATGAACCCCAGGTTCACATAGTGCGTGTTGG...GGGCTCAGGTTCACACTTCTGCTTTGAGACCAGGATGGGGTGTAAGCCATAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR TCA 90 bp CACCTCCAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGGGTACGTCTCTTAGGTaGTTTCTTTCCTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: HLQLVGREIPQSDSLDQLGTSLR*FLSLAS
Trigger: GGATGCCAAGGAAAGAAATCACCTAAGAGACGTACC...CAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTGGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR TCA 90 bp AGAAAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGAGCACAGAAGGGGGTaGAGTCACAGCTGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: RKGSEAFQNDLRIRGRAQEHRRG*SHSWVS
Trigger: GGAAACCCAGCTGTGACTTCACCCCCTTCTGTGCTC...TTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR TCA 90 bp GTGAACCTGAGCCCTGTGGCCACACATACTTTCCAGGCTTCACAAAGCAGGAAGGGAGATTCCACAGTCTaGCTCACTAGATCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: VNLSPVATHTFQASQSRKGDSTV*LTRSVD
Trigger: ATCAACTGATCTAGTGAGTCAGACTGTGGAATCTCC...CTTCCTGCTTTGTGAAGCCTGGAAAGTATGTGTGGCCACAGGGCTCAGGTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR TCA 90 bp CTCTATGGCTTACACCCCATCCTGGTCTCAAAGCAGAAGTGTGAACCTGAGCCCAGCAGAGGAGTGACATaGCTTCATTTCCACAAGTCT +
Preference number: 4 (lower is better)
Translates to: LYGLHPILVSKQKCEPEPSRGVT*LHFHKS
Trigger: AGACTTGTGGAAATGAAGTCATGTCACTCCTCTGCT...GGGCTCAGGTTCACACTTCTGCTTTGAGACCAGGATGGGGTGTAAGCCATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR GCA 90 bp AATGAGGTGAGCTCTATGGCAGAGGCAAAAACAACGGGAGAACAGCGAGCAGAGAGGCTCTCACTTTGTTaGACAAGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: NEVSSMAEAKTTGEQRAERLSLC*TSWSRT
Trigger: AGTTCGAGACCAGCTTGTGCAACAAAGTGAGAGCCT...CTCTGCTCGCTGTTCTCCCGTTGTTTTTGCCTCTGCCATAGAGCTCACCTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR GCA 90 bp CACCTCCAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGCCACCCAGGCTGGAGTaGAATGCCACAATCATAATT +
Preference number: 4 (lower is better)
Translates to: HLQLVGREIPQSDSLDQLPPRLE*NATIII
Trigger: AATTATGATTGTGGCATTGCACTCCAGCCTGGGTGG...CAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTGGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CAGTCTGACTCACTAGATCAGTTGATGGGGTTTCTAAGCACTCTACACATGGAAAAACAGTGCCATCGCTaGGCTTCCGAGTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: QSDSLDQLMGFLSTLHMEKQCHR*ASECPA
Trigger: AGCTGGGCACTCGGAAGCCCAGCGATGGCACTGTTT...TTCCATGTGTAGAGTGCTTAGAAACCCCATCAACTGATCTAGTGAGTCAGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR CCA 90 bp AGAATAAGAGGCAGGGCACAAGGATGGTACTTAACAAACTTCTGTCACCTAAGCAGTGGGCCCCAAAGTTaGGGGAGTCCGGGTGAATGT +
Preference number: 4 (lower is better)
Translates to: RIRGRAQGWYLTNFCHLSSGPQS*GSPGEC
Trigger: ACATTCACCCGGACTCCCCCAACTTTGGGGCCCACT...GCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp TGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATGCCTGCCTTGACCAATACAAGTGGGCCCCAAAGTTaGGGGAGTCCGGGTGAATGT +
Preference number: 4 (lower is better)
Translates to: WESAMNVQRTEMPALTNTSGPQS*GSPGEC
Trigger: ACATTCACCCGGACTCCCCCAACTTTGGGGCCCACT...TGTATTGGTCAAGGCAGGCATCTCTGTTCTCTGAACATTCATTGCACTTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp AAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGATGCTGGCATGGGGTGTaGAGGATAAGGAAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: KGSEAFQNDLRIRGRAQGCWHGV*RIRKSS
Trigger: GCTGGACTTCCTTATCCTCCACACCCCATGCCAGCA...TCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp TGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATGCCTGCCTTGACCAATACAGGGCCCTGGATTGATTaGTCCGTTGGTGTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: WESAMNVQRTEMPALTNTGPWID*SVGVGY
Trigger: GTACCCCACACCAACGGACCAATCAATCCAGGGCCC...TGTATTGGTCAAGGCAGGCATCTCTGTTCTCTGAACATTCATTGCACTTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp AGAAAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGTAGGGGCTGGGCCCTaGATTGATTGGTCCGTTGGT +
Preference number: 4 (lower is better)
Translates to: RKGSEAFQNDLRIRGRAQVGAGP*IDWSVG
Trigger: ACCAACGGACCAATCAATCCAGGGCCCAGCCCCTAC...TTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp AATAAGAGGCAGGGCACAAGGATGGTACTTAACAAACTTCTGTCACCTAAGCATGCCGAAGTGGGTGCTTaGGTGGAGAGCACAGAAGGG +
Preference number: 4 (lower is better)
Translates to: NKRQGTRMVLNKLLSPKHAEVGA*VESTEG
Trigger: CCCTTCTGTGCTCTCCACCCAAGCACCCACTTCGGC...ATGCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp GTGAACCTGAGCCCTGTGGCCACACATACTTTCCAGGCTTCACAAAGCAGGAAGGTTAACCTTACTCTATaGCTTACACCCCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: VNLSPVATHTFQASQSRKVNLTL*LTPHPG
Trigger: ACCAGGATGGGGTGTAAGCCATAGAGTAAGGTTAAC...CTTCCTGCTTTGTGAAGCCTGGAAAGTATGTGTGGCCACAGGGCTCAGGTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR TCA 90 bp AGAAAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAACGTACTTCCAGCGGTaGCTGTCCGTAGGGACAAAG +
Preference number: 4 (lower is better)
Translates to: RKGSEAFQNDLRIRGRAQTYFQR*LSVGTK
Trigger: CTTTGTCCCTACGGACAGTCACCGCTGGAAGTACGT...TTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR TCA 90 bp CTAAGCACTCTACACATGGAAGGATCGCTGTGCAAAGAGGCTCCTAGGATCCTGAGCAGAGGAGTGACATaGCTTCATTTCCACAAGTCT +
Preference number: 4 (lower is better)
Translates to: LSTLHMEGSLCKEAPRILSRGVT*LHFHKS
Trigger: AGACTTGTGGAAATGAAGTCATGTCACTCCTCTGCT...CAGGATCCTAGGAGCCTCTTTGCACAGCGATCCTTCCATGTGTAGAGTGCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR TCA 90 bp CTAAGCACTCTACACATGGAAGGATCGCTGTGCAAAGAGGCTCCTAGGATCCTGGTAATGGTGAACCATTaGAGGTTTCTGAGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LSTLHMEGSLCKEAPRILVMVNH*RFLSRG
Trigger: TCCTCTGCTCAGAAACCTTCAATGGTTCACCATTAC...CAGGATCCTAGGAGCCTCTTTGCACAGCGATCCTTCCATGTGTAGAGTGCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR TCA 90 bp CAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGATGGGGGTAATGGTGAACCATTaGAGGTTTCTGAGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: QLVGREIPQSDSLDQLMGVMVNH*RFLSRG
Trigger: TCCTCTGCTCAGAAACCTTCAATGGTTCACCATTAC...CCCCATCAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR TCA 90 bp CACCTCCAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGGGCCTCCAAAAGGGCTaGGATTATAGGCTTAAACTA +
Preference number: 4 (lower is better)
Translates to: HLQLVGREIPQSDSLDQLGLQKG*DYRLKL
Trigger: TAGTTTAAGCCTATAATCTCAGCCCTTTTGGAGGCC...CAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTGGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR GCA 90 bp AAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGATCTCTGCCAGAGAGGTaGATCCTCCAGGATGATCTG +
Preference number: 4 (lower is better)
Translates to: KGSEAFQNDLRIRGRAQGSLPER*ILQDDL
Trigger: CAGATCATCCTGGAGGATGCACCTCTCTGGCAGAGA...TCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR GCA 90 bp AATAAGAGGCAGGGCACAAGGATGGTACTTAACAAACTTCTGTCACCTAAGCATAGGTGGACACAGCAATaGTGGTTAGCGAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: NKRQGTRMVLNKLLSPKHRWTQQ*WLARAP
Trigger: GGGAGCCCTCGCTAACCAGCATTGCTGTGTCCACCT...ATGCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR GCA 90 bp GGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGATGGAGGCTCTCACTTTGTTaGACAAGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: GSEAFQNDLRIRGRAQGWRLSLC*TSWSRT
Trigger: AGTTCGAGACCAGCTTGTGCAACAAAGTGAGAGCCT...CCATCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR GCA 90 bp GGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGATGGAGGCACAGTACCAGCTaGTGTGGGTTACAAAGACAA +
Preference number: 4 (lower is better)
Translates to: GSEAFQNDLRIRGRAQGWRHSTS*CGLQRQ
Trigger: TTGTCTTTGTAACCCACAGCAGCTGGTACTGTGCCT...CCATCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp AATAAGAGGCAGGGCACAAGGATGGTACTTAACAAACTTCTGTCACCTAAGCATGCAGGAGGGAGTACATaGCATTGGGGTCCAACCCTG +
Preference number: 4 (lower is better)
Translates to: NKRQGTRMVLNKLLSPKHAGGST*HWGPTL
Trigger: CAGGGTTGGACCCCAATGCCATGTACTCCCTCCTGC...ATGCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp CTAAGCACTCTACACATGGAAGGATCGCTGTGCAAAGAGGCTCCTAGGATCCTGTTTGTTACCATTCGATaGGCACTTCCAACACGCACT +
Preference number: 4 (lower is better)
Translates to: LSTLHMEGSLCKEAPRILFVTIR*ALPTRT
Trigger: AGTGCGTGTTGGAAGTGCCCATCGAATGGTAACAAA...CAGGATCCTAGGAGCCTCTTTGCACAGCGATCCTTCCATGTGTAGAGTGCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp CAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGATGGGGGGTGATTTCTTTCCTTaGCATCCAAGAAGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: QLVGREIPQSDSLDQLMGGDFFP*HPRRLW
Trigger: CCAAAGCCTTCTTGGATGCCAAGGAAAGAAATCACC...CCCCATCAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CTAAGCACTCTACACATGGAAGGATCGCTGTGCAAAGAGGCTCCTAGGATCCTGGGTGATTTCTTTCCTTaGCATCCAAGAAGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: LSTLHMEGSLCKEAPRILGDFFP*HPRRLW
Trigger: CCAAAGCCTTCTTGGATGCCAAGGAAAGAAATCACC...CAGGATCCTAGGAGCCTCTTTGCACAGCGATCCTTCCATGTGTAGAGTGCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp GGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGATGGACACTCCATCTGGATTaGAAAAGATCCAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: GSEAFQNDLRIRGRAQGWTLHLD*KRSSLP
Trigger: TGGGAGGCTGGATCTTTTCCAATCCAGATGGAGTGT...CCATCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000441464.1
CDS-3UTR CCA 90 bp AAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGAATTGGTCCGTTGGTGTaGGGTACAGACAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: KGSEAFQNDLRIRGRAQGIGPLV*GTDRML
Trigger: CAGCATCCTGTCTGTACCCCACACCAACGGACCAAT...TCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CTTAACAAACTTCTGTCACCTAAGCATGGCAAGAATAAGCTGCAGAGAAAATGGGAGGAGAAATGCTCCTaGGGTGCTGGCGTGCACCTC +
Preference number: 4 (lower is better)
Translates to: LNKLLSPKHGKNKLQRKWEEKCS*GAGVHL
Trigger: GAGGTGCACGCCAGCACCCCAGGAGCATTTCTCCTC...CCATTTTCTCTGCAGCTTATTCTTGCCATGCTTAGGTGACAGAAGTTTGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp ATAGGCAAGGCACAGTACCAGCTGCTGTGGGTTACAAAGACAAGAAGGCTAGGCGGCAGGGCACAAGGATaGTACTTAACAAACTTCTGT +
Preference number: 4 (lower is better)
Translates to: IGKAQYQLLWVTKTRRLGGRAQG*YLTNFC
Trigger: ACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCC...GCCTAGCCTTCTTGTCTTTGTAACCCACAGCAGCTGGTACTGTGCCTTGCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp CAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGATGGGGGTTAACCTTACTCTATaGCTTACACCCCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: QLVGREIPQSDSLDQLMGVNLTL*LTPHPG
Trigger: ACCAGGATGGGGTGTAAGCCATAGAGTAAGGTTAAC...CCCCATCAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp TGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATGCCTGCCTTGACCAATACACAGAGGGACCTAAGCTaGGGAAGTGGTTTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: WESAMNVQRTEMPALTNTQRDLS*GSGFRP
Trigger: TGGCCTGAAACCACTTCCCCAGCTTAGGTCCCTCTG...TGTATTGGTCAAGGCAGGCATCTCTGTTCTCTGAACATTCATTGCACTTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp AGAATAAGAGGCAGGGCACAAGGATGGTACTTAACAAACTTCTGTCACCTAAGCCAGAGGGACCTAAGCTaGGGAAGTGGTTTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RIRGRAQGWYLTNFCHLSQRDLS*GSGFRP
Trigger: TGGCCTGAAACCACTTCCCCAGCTTAGGTCCCTCTG...GCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR TCA 90 bp GTGAACCTGAGCCCTGTGGCCACACATACTTTCCAGGCTTCACAAAGCAGGAAGTTCTATCAAATTCACTaGGGGAGAATGGTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: VNLSPVATHTFQASQSRKFYQIH*GRMVSV
Trigger: CACAGAAACCATTCTCCCTCAGTGAATTTGATAGAA...CTTCCTGCTTTGTGAAGCCTGGAAAGTATGTGTGGCCACAGGGCTCAGGTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000441464.1
CDS-3UTR TCA 90 bp TACTTAACAAACTTCTGTCACCTAAGCATGGCAAGAATAAGCTGCAGAGAAAATCTCCGGCACCATTGCTaGTGGTCCACAGGCACGGGT +
Preference number: 4 (lower is better)
Translates to: YLTNFCHLSMARISCRENLRHHC*WSTGTG
Trigger: ACCCGTGCCTGTGGACCATCAGCAATGGTGCCGGAG...ATTTTCTCTGCAGCTTATTCTTGCCATGCTTAGGTGACAGAAGTTTGTTAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR TCA 90 bp GGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGATGGGGCCTCCAAAAGGGCTaGGATTATAGGCTTAAACTA +
Preference number: 4 (lower is better)
Translates to: GSEAFQNDLRIRGRAQGWGLQKG*DYRLKL
Trigger: TAGTTTAAGCCTATAATCTCAGCCCTTTTGGAGGCC...CCATCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR GCA 90 bp CACAGGCAAGGTATAGAGGTGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATAACCCACTTGAACAGTaGTTGGGGAGCGGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: HRQGIEVGKCNECSENRDNPLEQ*LGSGEK
Trigger: CTTCTCTCCGCTCCCCAAGCACTGTTCAAGTGGGTT...ATCTCTGTTCTCTGAACATTCATTGCACTTTCCCACCTCTATACCTTGCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR GCA 90 bp CACAGGCAAGGTATAGAGGTGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATGCACTTCTCGAACTTTaGCGAGAGCCGTTACCCAAC +
Preference number: 4 (lower is better)
Translates to: HRQGIEVGKCNECSENRDALLEL*REPLPN
Trigger: GTTGGGTAACGGCTCTCGGCAAAGTTCGAGAAGTGC...ATCTCTGTTCTCTGAACATTCATTGCACTTTCCCACCTCTATACCTTGCCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR GCA 90 bp GGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGATGGCTGGAAACATCCGTCTaGCATTCTTGGTCACAATCA +
Preference number: 4 (lower is better)
Translates to: GSEAFQNDLRIRGRAQGWLETSV*HSWSQS
Trigger: TGATTGTGACCAAGAATGGCAGACGGATGTTTCCAG...CCATCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR CCA 90 bp AGAAAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGTCACGGCTATGAACTaGGTTTCAGGGAAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RKGSEAFQNDLRIRGRAQVTAMN*VSGKEQ
Trigger: CTGCTCCTTCCCTGAAACCCAGTTCATAGCCGTGAC...TTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp CACAGGCAAGGTATAGAGGTGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATGTACAGACAGGATGCTaGCATGGGGTGTGGAGGATA +
Preference number: 4 (lower is better)
Translates to: HRQGIEVGKCNECSENRDVQTGC*HGVWRI
Trigger: TATCCTCCACACCCCATGCCAGCATCCTGTCTGTAC...ATCTCTGTTCTCTGAACATTCATTGCACTTTCCCACCTCTATACCTTGCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp AGAATAAGAGGCAGGGCACAAGGATGGTACTTAACAAACTTCTGTCACCTAAGCGCGATCCTCTTACCTTaGCCTCCAAAAGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: RIRGRAQGWYLTNFCHLSAILLP*PPKGLR
Trigger: TCTCAGCCCTTTTGGAGGCCAAGGTAAGAGGATCGC...GCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp AAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGAATCTACCACCCAGGCTaGAGTGCAATGCCACAATCA +
Preference number: 4 (lower is better)
Translates to: KGSEAFQNDLRIRGRAQGIYHPG*SAMPQS
Trigger: TGATTGTGGCATTGCACTCCAGCCTGGGTGGTAGAT...TCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR TCA 90 bp CGAGAGGCTTACAGTCTAATAGGGAGAGACACACTCACAGGTAACAAAAATACATGCTTAACCATCCAGTaGGGAAGGAGAATGGTGCCC +
Preference number: 4 (lower is better)
Translates to: REAYSLIGRDTLTGNKNTCLTIQ*GRRMVP
Trigger: GGGCACCATTCTCCTTCCTCACTGGATGGTTAAGCA...TGTATTTTTGTTACCTGTGAGTGTGTCTCTCCCTATTAGACTGTAAGCCTCTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR GCA 90 bp AGAAAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAATGGAGTTTCCTGCTGTaGACACTCCATCTGGATTGG +
Preference number: 4 (lower is better)
Translates to: RKGSEAFQNDLRIRGRAQWSFLL*TLHLDW
Trigger: CCAATCCAGATGGAGTGTGCACAGCAGGAAACTCCA...TTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000441464.1
CDS-3UTR GCA 90 bp CAGTCTGACTCACTAGATCAGTTGATGGGGTTTCTAAGCACTCTACACATGGAAATGGAAGGATCGCTGTaGAAAGAGGCTCCTAGGATC +
Preference number: 4 (lower is better)
Translates to: QSDSLDQLMGFLSTLHMEMEGSL*KEAPRI
Trigger: GATCCTAGGAGCCTCTTTGCACAGCGATCCTTCCAT...TTCCATGTGTAGAGTGCTTAGAAACCCCATCAACTGATCTAGTGAGTCAGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CTTAACAAACTTCTGTCACCTAAGCATGGCAAGAATAAGCTGCAGAGAAAATGGTGCTGGCATGGGGTGTaGAGGATAAGGAAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LNKLLSPKHGKNKLQRKWCWHGV*RIRKSS
Trigger: GCTGGACTTCCTTATCCTCCACACCCCATGCCAGCA...CCATTTTCTCTGCAGCTTATTCTTGCCATGCTTAGGTGACAGAAGTTTGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CGAGAGGCTTACAGTCTAATAGGGAGAGACACACTCACAGGTAACAAAAATACAGACAGGATGCTGGCATaGGGTGTGGAGGATAAGGAA +
Preference number: 4 (lower is better)
Translates to: REAYSLIGRDTLTGNKNTDRMLA*GVEDKE
Trigger: TTCCTTATCCTCCACACCCCATGCCAGCATCCTGTC...TGTATTTTTGTTACCTGTGAGTGTGTCTCTCCCTATTAGACTGTAAGCCTCTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp AATAAGAGGCAGGGCACAAGGATGGTACTTAACAAACTTCTGTCACCTAAGCATGTACAGACAGGATGCTaGCATGGGGTGTGGAGGATA +
Preference number: 4 (lower is better)
Translates to: NKRQGTRMVLNKLLSPKHVQTGC*HGVWRI
Trigger: TATCCTCCACACCCCATGCCAGCATCCTGTCTGTAC...ATGCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp AATAAGAGGCAGGGCACAAGGATGGTACTTAACAAACTTCTGTCACCTAAGCATCCACTGCTGTCCAGGTaGACACAGCAATGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: NKRQGTRMVLNKLLSPKHPLLSR*TQQCWL
Trigger: TAACCAGCATTGCTGTGTCCACCTGGACAGCAGTGG...ATGCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CACCTCCAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGAAAGTAGGATACACATaGGCAAACAGAACCCTTTGT +
Preference number: 4 (lower is better)
Translates to: HLQLVGREIPQSDSLDQLKVGYT*ANRTLC
Trigger: ACAAAGGGTTCTGTTTGCCCATGTGTATCCTACTTT...CAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTGGAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441464.1
CDS-3UTR GCA 90 bp AATAAGAGGCAGGGCACAAGGATGGTACTTAACAAACTTCTGTCACCTAAGCATTGGAGTTTCCTGCTGTaGACACTCCATCTGGATTGG +
Preference number: 4 (lower is better)
Translates to: NKRQGTRMVLNKLLSPKHWSFLL*TLHLDW
Trigger: CCAATCCAGATGGAGTGTGCACAGCAGGAAACTCCA...ATGCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000441464.1
CDS-3UTR GCA 90 bp CGAGAGGCTTACAGTCTAATAGGGAGAGACACACTCACAGGTAACAAAAATACAATGGAAGGATCGCTGTaGAAAGAGGCTCCTAGGATC +
Preference number: 4 (lower is better)
Translates to: REAYSLIGRDTLTGNKNTMEGSL*KEAPRI
Trigger: GATCCTAGGAGCCTCTTTGCACAGCGATCCTTCCAT...TGTATTTTTGTTACCTGTGAGTGTGTCTCTCCCTATTAGACTGTAAGCCTCTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR GCA 90 bp TGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATGCCTGCCTTGACCAATACACCACCCAGGCTGGAGTaGAATGCCACAATCATAATT +
Preference number: 4 (lower is better)
Translates to: WESAMNVQRTEMPALTNTPPRLE*NATIII
Trigger: AATTATGATTGTGGCATTGCACTCCAGCCTGGGTGG...TGTATTGGTCAAGGCAGGCATCTCTGTTCTCTGAACATTCATTGCACTTTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp TACTTAACAAACTTCTGTCACCTAAGCATGGCAAGAATAAGCTGCAGAGAAAATGCAGGAGGGAGTACATaGCATTGGGGTCCAACCCTG +
Preference number: 4 (lower is better)
Translates to: YLTNFCHLSMARISCRENAGGST*HWGPTL
Trigger: CAGGGTTGGACCCCAATGCCATGTACTCCCTCCTGC...ATTTTCTCTGCAGCTTATTCTTGCCATGCTTAGGTGACAGAAGTTTGTTAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp AGAAAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAACACTCCATCTGGATTaGAAAAGATCCAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RKGSEAFQNDLRIRGRAQTLHLD*KRSSLP
Trigger: TGGGAGGCTGGATCTTTTCCAATCCAGATGGAGTGT...TTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000441464.1
CDS-3UTR CCA 90 bp TACTTAACAAACTTCTGTCACCTAAGCATGGCAAGAATAAGCTGCAGAGAAAATGGGCCCTGGATTGATTaGTCCGTTGGTGTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: YLTNFCHLSMARISCRENGPWID*SVGVGY
Trigger: GTACCCCACACCAACGGACCAATCAATCCAGGGCCC...ATTTTCTCTGCAGCTTATTCTTGCCATGCTTAGGTGACAGAAGTTTGTTAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CTTAACAAACTTCTGTCACCTAAGCATGGCAAGAATAAGCTGCAGAGAAAATGGCCACTGCTGTCCAGGTaGACACAGCAATGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: LNKLLSPKHGKNKLQRKWPLLSR*TQQCWL
Trigger: TAACCAGCATTGCTGTGTCCACCTGGACAGCAGTGG...CCATTTTCTCTGCAGCTTATTCTTGCCATGCTTAGGTGACAGAAGTTTGTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp AAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGAGGCAGGGCACAAGGATaGTACTTAACAAACTTCTGT +
Preference number: 4 (lower is better)
Translates to: KGSEAFQNDLRIRGRAQGGRAQG*YLTNFC
Trigger: ACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCC...TCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp AATAAGAGGCAGGGCACAAGGATGGTACTTAACAAACTTCTGTCACCTAAGCATATCTACCACCCAGGCTaGAGTGCAATGCCACAATCA +
Preference number: 4 (lower is better)
Translates to: NKRQGTRMVLNKLLSPKHIYHPG*SAMPQS
Trigger: TGATTGTGGCATTGCACTCCAGCCTGGGTGGTAGAT...ATGCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp TGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATGCCTGCCTTGACCAATACACAGTACCAGCTGCTGTaGGTTACAAAGACAAGAAGG +
Preference number: 4 (lower is better)
Translates to: WESAMNVQRTEMPALTNTQYQLL*VTKTRR
Trigger: CCTTCTTGTCTTTGTAACCCACAGCAGCTGGTACTG...TGTATTGGTCAAGGCAGGCATCTCTGTTCTCTGAACATTCATTGCACTTTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
3UTR CAA 72 bp CTCCACAGAAAAGGAAGTGAGGCTTTCCAGAACGATTaGAGAATAAGAGGCAGGGCACAAGGATGGTACTTA +
Preference number: 4 (lower is better)
Translates to: LHRKGSEAFQND*RIRGRAQGWYL
Trigger: TAAGTACCATCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTTTCTGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR TCA 90 bp TACTTAACAAACTTCTGTCACCTAAGCATGGCAAGAATAAGCTGCAGAGAAAATTCTGCCCGCCTCCATTaGGCTTGTTGGTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: YLTNFCHLSMARISCRENSARLH*ACWSAS
Trigger: TGAAGCTGACCAACAAGCTCAATGGAGGCGGGCAGA...ATTTTCTCTGCAGCTTATTCTTGCCATGCTTAGGTGACAGAAGTTTGTTAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR TCA 90 bp AGAATAAGAGGCAGGGCACAAGGATGGTACTTAACAAACTTCTGTCACCTAAGCCCACAGAAAAGGAAGTaGGGCTTTCCAGAACGATTT +
Preference number: 4 (lower is better)
Translates to: RIRGRAQGWYLTNFCHLSPQKRK*GFPERF
Trigger: AAATCGTTCTGGAAAGCCTCACTTCCTTTTCTGTGG...GCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR TCA 90 bp GGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGATGGTATAGTGAGGAGAATTaGCTTCATTCCACTGGTAAT +
Preference number: 4 (lower is better)
Translates to: GSEAFQNDLRIRGRAQGWYSEEN*LHSTGN
Trigger: ATTACCAGTGGAATGAAGTCAATTCTCCTCACTATA...CCATCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR GCA 90 bp AGAATAAGAGGCAGGGCACAAGGATGGTACTTAACAAACTTCTGTCACCTAAGCCTTCCCTCACTTGCCTaGTTTTCAAACCCACTTGAA +
Preference number: 4 (lower is better)
Translates to: RIRGRAQGWYLTNFCHLSLPSLA*FSNPLE
Trigger: TTCAAGTGGGTTTGAAAAGCAGGCAAGTGAGGGAAG...GCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR CCA 90 bp CTTAACAAACTTCTGTCACCTAAGCATGGCAAGAATAAGCTGCAGAGAAAATGGCACTTGAACAGTGCTTaGGGAGCGGAGAGAAGATAC +
Preference number: 4 (lower is better)
Translates to: LNKLLSPKHGKNKLQRKWHLNSA*GAERRY
Trigger: GTATCTTCTCTCCGCTCCCCAAGCACTGTTCAAGTG...CCATTTTCTCTGCAGCTTATTCTTGCCATGCTTAGGTGACAGAAGTTTGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR CCA 90 bp TGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATGCCTGCCTTGACCAATACAGGTGATTTCTTTCCTTaGCATCCAAGAAGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: WESAMNVQRTEMPALTNTGDFFP*HPRRLW
Trigger: CCAAAGCCTTCTTGGATGCCAAGGAAAGAAATCACC...TGTATTGGTCAAGGCAGGCATCTCTGTTCTCTGAACATTCATTGCACTTTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp AGAATAAGAGGCAGGGCACAAGGATGGTACTTAACAAACTTCTGTCACCTAAGCGTTAACCTTACTCTATaGCTTACACCCCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: RIRGRAQGWYLTNFCHLSVNLTL*LTPHPG
Trigger: ACCAGGATGGGGTGTAAGCCATAGAGTAAGGTTAAC...GCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CCA 90 bp CGAGAGGCTTACAGTCTAATAGGGAGAGACACACTCACAGGTAACAAAAATACACAGTACCAGCTGCTGTaGGTTACAAAGACAAGAAGG +
Preference number: 4 (lower is better)
Translates to: REAYSLIGRDTLTGNKNTQYQLL*VTKTRR
Trigger: CCTTCTTGTCTTTGTAACCCACAGCAGCTGGTACTG...TGTATTTTTGTTACCTGTGAGTGTGTCTCTCCCTATTAGACTGTAAGCCTCTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR TCA 90 bp CGAGAGGCTTACAGTCTAATAGGGAGAGACACACTCACAGGTAACAAAAATACACCACAGAAAAGGAAGTaGGGCTTTCCAGAACGATTT +
Preference number: 4 (lower is better)
Translates to: REAYSLIGRDTLTGNKNTPQKRK*GFPERF
Trigger: AAATCGTTCTGGAAAGCCTCACTTCCTTTTCTGTGG...TGTATTTTTGTTACCTGTGAGTGTGTCTCTCCCTATTAGACTGTAAGCCTCTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR TCA 90 bp CGAGAGGCTTACAGTCTAATAGGGAGAGACACACTCACAGGTAACAAAAATACAGGCCTCCAAAAGGGCTaGGATTATAGGCTTAAACTA +
Preference number: 4 (lower is better)
Translates to: REAYSLIGRDTLTGNKNTGLQKG*DYRLKL
Trigger: TAGTTTAAGCCTATAATCTCAGCCCTTTTGGAGGCC...TGTATTTTTGTTACCTGTGAGTGTGTCTCTCCCTATTAGACTGTAAGCCTCTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR GCA 90 bp CTTAACAAACTTCTGTCACCTAAGCATGGCAAGAATAAGCTGCAGAGAAAATGGCTTCCTTCCCTCACTTaGCTGCTTTTCAAACCCACT +
Preference number: 4 (lower is better)
Translates to: LNKLLSPKHGKNKLQRKWLPSLT*LLFKPT
Trigger: AGTGGGTTTGAAAAGCAGGCAAGTGAGGGAAGGAAG...CCATTTTCTCTGCAGCTTATTCTTGCCATGCTTAGGTGACAGAAGTTTGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR GCA 90 bp CTTAACAAACTTCTGTCACCTAAGCATGGCAAGAATAAGCTGCAGAGAAAATGGAGGCACAGTACCAGCTaGTGTGGGTTACAAAGACAA +
Preference number: 4 (lower is better)
Translates to: LNKLLSPKHGKNKLQRKWRHSTS*CGLQRQ
Trigger: TTGTCTTTGTAACCCACAGCAGCTGGTACTGTGCCT...CCATTTTCTCTGCAGCTTATTCTTGCCATGCTTAGGTGACAGAAGTTTGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp TACTTAACAAACTTCTGTCACCTAAGCATGGCAAGAATAAGCTGCAGAGAAAATGTCACGGCTATGAACTaGGTTTCAGGGAAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: YLTNFCHLSMARISCRENVTAMN*VSGKEQ
Trigger: CTGCTCCTTCCCTGAAACCCAGTTCATAGCCGTGAC...ATTTTCTCTGCAGCTTATTCTTGCCATGCTTAGGTGACAGAAGTTTGTTAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp CTTAACAAACTTCTGTCACCTAAGCATGGCAAGAATAAGCTGCAGAGAAAATGGTGTGCACACTCCATCTaGATTGGAAAAGATCCAGCC +
Preference number: 4 (lower is better)
Translates to: LNKLLSPKHGKNKLQRKWCAHSI*IGKDPA
Trigger: GGCTGGATCTTTTCCAATCCAGATGGAGTGTGCACA...CCATTTTCTCTGCAGCTTATTCTTGCCATGCTTAGGTGACAGAAGTTTGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000441464.1
CDS-3UTR CCA 90 bp TACTTAACAAACTTCTGTCACCTAAGCATGGCAAGAATAAGCTGCAGAGAAAATGTACAGACAGGATGCTaGCATGGGGTGTGGAGGATA +
Preference number: 4 (lower is better)
Translates to: YLTNFCHLSMARISCRENVQTGC*HGVWRI
Trigger: TATCCTCCACACCCCATGCCAGCATCCTGTCTGTAC...ATTTTCTCTGCAGCTTATTCTTGCCATGCTTAGGTGACAGAAGTTTGTTAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR TCA 90 bp TACTTAACAAACTTCTGTCACCTAAGCATGGCAAGAATAAGCTGCAGAGAAAATACCACATTGAGCAGATaGGAAACAGTGCCATCGCTG +
Preference number: 4 (lower is better)
Translates to: YLTNFCHLSMARISCRENTTLSR*ETVPSL
Trigger: CAGCGATGGCACTGTTTCTCATCTGCTCAATGTGGT...ATTTTCTCTGCAGCTTATTCTTGCCATGCTTAGGTGACAGAAGTTTGTTAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR TCA 90 bp CTTAACAAACTTCTGTCACCTAAGCATGGCAAGAATAAGCTGCAGAGAAAATGGCCAACACGCACTATGTaGACCTGGGGTTCATATTTA +
Preference number: 4 (lower is better)
Translates to: LNKLLSPKHGKNKLQRKWPTRTM*TWGSYL
Trigger: TAAATATGAACCCCAGGTTCACATAGTGCGTGTTGG...CCATTTTCTCTGCAGCTTATTCTTGCCATGCTTAGGTGACAGAAGTTTGTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR TCA 90 bp AGAATAAGAGGCAGGGCACAAGGATGGTACTTAACAAACTTCTGTCACCTAAGCTTCTATCAAATTCACTaGGGGAGAATGGTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: RIRGRAQGWYLTNFCHLSFYQIH*GRMVSV
Trigger: CACAGAAACCATTCTCCCTCAGTGAATTTGATAGAA...GCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000441464.1
CDS-3UTR TCA 90 bp CTTAACAAACTTCTGTCACCTAAGCATGGCAAGAATAAGCTGCAGAGAAAATGGAGCAGAGGAGTGACATaGCTTCATTTCCACAAGTCT +
Preference number: 4 (lower is better)
Translates to: LNKLLSPKHGKNKLQRKWSRGVT*LHFHKS
Trigger: AGACTTGTGGAAATGAAGTCATGTCACTCCTCTGCT...CCATTTTCTCTGCAGCTTATTCTTGCCATGCTTAGGTGACAGAAGTTTGTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR GCA 90 bp CACAGGCAAGGTATAGAGGTGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATATAGAGGTGGGAAAGTaGAATGAATGTTCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: HRQGIEVGKCNECSENRDIEVGK*NECSEN
Trigger: GTTCTCTGAACATTCATTGCACTTTCCCACCTCTAT...ATCTCTGTTCTCTGAACATTCATTGCACTTTCCCACCTCTATACCTTGCCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CCA 90 bp CTTAACAAACTTCTGTCACCTAAGCATGGCAAGAATAAGCTGCAGAGAAAATGGGGCAGGGCACAAGGATaGTACTTAACAAACTTCTGT +
Preference number: 4 (lower is better)
Translates to: LNKLLSPKHGKNKLQRKWGRAQG*YLTNFC
Trigger: ACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCC...CCATTTTCTCTGCAGCTTATTCTTGCCATGCTTAGGTGACAGAAGTTTGTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR TCA 90 bp AGAATAAGAGGCAGGGCACAAGGATGGTACTTAACAAACTTCTGTCACCTAAGCTATAGTGAGGAGAATTaGCTTCATTCCACTGGTAAT +
Preference number: 4 (lower is better)
Translates to: RIRGRAQGWYLTNFCHLSYSEEN*LHSTGN
Trigger: ATTACCAGTGGAATGAAGTCAATTCTCCTCACTATA...GCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR GCA 90 bp CTTAACAAACTTCTGTCACCTAAGCATGGCAAGAATAAGCTGCAGAGAAAATGGAAAGTCTCCACATTATaGCACCAACCTGTTAAGCTT +
Preference number: 4 (lower is better)
Translates to: LNKLLSPKHGKNKLQRKWKVSTL*HQPVKL
Trigger: AAGCTTAACAGGTTGGTGGCATAATGTGGAGACTTT...CCATTTTCTCTGCAGCTTATTCTTGCCATGCTTAGGTGACAGAAGTTTGTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR TCA 90 bp TACTTAACAAACTTCTGTCACCTAAGCATGGCAAGAATAAGCTGCAGAGAAAATTATAGTGAGGAGAATTaGCTTCATTCCACTGGTAAT +
Preference number: 4 (lower is better)
Translates to: YLTNFCHLSMARISCRENYSEEN*LHSTGN
Trigger: ATTACCAGTGGAATGAAGTCAATTCTCCTCACTATA...ATTTTCTCTGCAGCTTATTCTTGCCATGCTTAGGTGACAGAAGTTTGTTAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS GCA 90 bp GTCACAGCTGGGTTTCCGAGGAGAAATGCTCCTGGGGTGCTGGCGTaGACCTCCGGGCCTGGCCCACTGGGGCCTCCGGCACCATTGCTG +
Preference number: 5 (lower is better)
Translates to: VTAGFPRRNAPGVLA*TSGPGPLGPPAPLL
Trigger: CAGCAATGGTGCCGGAGGCCCCAGTGGGCCAGGCCCGGAGGTGCACGCCAGCACCCCAGGAGCATTTCTCCTCGGAAACCCAGCTGTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
ENST00000465440.1
CDS GCA 90 bp GAATGGTGCCCACCCGCTCCTGGGCCACCCCAGCCCGCGAAGGGATaGGAGGCCACTGCTGTCCAGGTGGACACAGCAATGCTGGTTAGC +
Preference number: 5 (lower is better)
Translates to: EWCPPAPGPPQPAKG*EATAVQVDTAMLVS
Trigger: GCTAACCAGCATTGCTGTGTCCACCTGGACAGCAGTGGCCTCGCATCCCTTCGCGGGCTGGGGTGGCCCAGGAGCGGGTGGGCACCATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
ENST00000465440.1
CDS CCA 90 bp GTGAAGTCACAGCTGGGTTTCCGAGGAGAAATGCTCCTGGGGTGCTaGCGTGCACCTCCGGGCCTGGCCCACTGGGGCCTCCGGCACCAT +
Preference number: 5 (lower is better)
Translates to: VKSQLGFRGEMLLGC*RAPPGLAHWGLRHH
Trigger: ATGGTGCCGGAGGCCCCAGTGGGCCAGGCCCGGAGGTGCACGCCAGCACCCCAGGAGCATTTCTCCTCGGAAACCCAGCTGTGACTTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
ENST00000465440.1
CDS CCA 90 bp GGCCACCCCAGCCCGCGAAGGGATGCGAGGCCACTGCTGTCCAGGTaGACACAGCAATGCTGGTTAGCGAGGGCTCCCCCAGAACCTCCA +
Preference number: 5 (lower is better)
Translates to: GHPSPRRDARPLLSR*TQQCWLARAPPEPP
Trigger: TGGAGGTTCTGGGGGAGCCCTCGCTAACCAGCATTGCTGTGTCCACCTGGACAGCAGTGGCCTCGCATCCCTTCGCGGGCTGGGGTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
ENST00000465440.1
CDS GCA 90 bp CCGCGAAGGGATGCGAGGCCACTGCTGTCCAGGTGGACACAGCAATaGTGGTTAGCGAGGGCTCCCCCAGAACCTCCACACCAGCCGAAG +
Preference number: 5 (lower is better)
Translates to: PRRDARPLLSRWTQQ*WLARAPPEPPHQPK
Trigger: CTTCGGCTGGTGTGGAGGTTCTGGGGGAGCCCTCGCTAACCAGCATTGCTGTGTCCACCTGGACAGCAGTGGCCTCGCATCCCTTCGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
ENST00000465440.1
CDS CCA 90 bp AGCGAGGGCTCCCCCAGAACCTCCACACCAGCCGAAGTGGGTGCTTaGGTGGAGAGCACAGAAGGGGGTGAAGTCACAGCTGGGTTTCCG +
Preference number: 5 (lower is better)
Translates to: SEGSPRTSTPAEVGA*VESTEGGEVTAGFP
Trigger: CGGAAACCCAGCTGTGACTTCACCCCCTTCTGTGCTCTCCACCCAAGCACCCACTTCGGCTGGTGTGGAGGTTCTGGGGGAGCCCTCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
ENST00000465440.1
CDS CCA 90 bp CGAAGGGATGCGAGGCCACTGCTGTCCAGGTGGACACAGCAATGCTaGTTAGCGAGGGCTCCCCCAGAACCTCCACACCAGCCGAAGTGG +
Preference number: 5 (lower is better)
Translates to: RRDARPLLSRWTQQC*LARAPPEPPHQPKW
Trigger: CCACTTCGGCTGGTGTGGAGGTTCTGGGGGAGCCCTCGCTAACCAGCATTGCTGTGTCCACCTGGACAGCAGTGGCCTCGCATCCCTTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
ENST00000465440.1
CDS-3UTR CAA 90 bp CAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGGTGGGGCTGGGCCCTGGATaGATTGGTCCGTTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: QGVTFQPGSGRWVGFAQVGLGPG*IGPLVW
Trigger: CCACACCAACGGACCAATCAATCCAGGGCCCAGCCC...CACCTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS CCA 90 bp AGGGCTCCCCCAGAACCTCCACACCAGCCGAAGTGGGTGCTTGGGTaGAGAGCACAGAAGGGGGTGAAGTCACAGCTGGGTTTCCGAGGA +
Preference number: 5 (lower is better)
Translates to: RAPPEPPHQPKWVLG*RAQKGVKSQLGFRG
Trigger: TCCTCGGAAACCCAGCTGTGACTTCACCCCCTTCTGTGCTCTCCACCCAAGCACCCACTTCGGCTGGTGTGGAGGTTCTGGGGGAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
ENST00000465440.1
CDS CCA 90 bp TGCTGGTTAGCGAGGGCTCCCCCAGAACCTCCACACCAGCCGAAGTaGGTGCTTGGGTGGAGAGCACAGAAGGGGGTGAAGTCACAGCTG +
Preference number: 5 (lower is better)
Translates to: CWLARAPPEPPHQPK*VLGWRAQKGVKSQL
Trigger: CAGCTGTGACTTCACCCCCTTCTGTGCTCTCCACCCAAGCACCCACTTCGGCTGGTGTGGAGGTTCTGGGGGAGCCCTCGCTAACCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
ENST00000465440.1
CDS TCA 90 bp GATCGCTGTGCAAAGAGGCTCCTAGGATCCTGCTTAACCATCCAGTaGGGAAGGAGAATGGTGCCCACCCGCTCCTGGGCCACCCCAGCC +
Preference number: 5 (lower is better)
Translates to: DRCAKRLLGSCLTIQ*GRRMVPTRSWATPA
Trigger: GGCTGGGGTGGCCCAGGAGCGGGTGGGCACCATTCTCCTTCCTCACTGGATGGTTAAGCAGGATCCTAGGAGCCTCTTTGCACAGCGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
ENST00000465440.1
CDS TCA 90 bp GGTCGCCTTTTTCCCTCCCTGCCTGAAGCTCACTCTCCACCACATTaGGCAGATGAGAAACAGTGCCATCGCTGGGCTTCCGAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: GRLFPSLPEAHSPPH*ADEKQCHRWASECP
Trigger: TGGGCACTCGGAAGCCCAGCGATGGCACTGTTTCTCATCTGCTCAATGTGGTGGAGAGTGAGCTTCAGGCAGGGAGGGAAAAAGGCGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR CAA 90 bp CAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGATGGGGGGGCCTCCGGCACCATaGCTGATGGTCCACAGGCAC +
Preference number: 5 (lower is better)
Translates to: QLVGREIPQSDSLDQLMGGPPAP*LMVHRH
Trigger: GTGCCTGTGGACCATCAGCAATGGTGCCGGAGGCCC...CCCCATCAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CAA 90 bp ATGCAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGAGACAGGCTCTCACTTaGTTGCACAAGCTGGTCTCG +
Preference number: 5 (lower is better)
Translates to: MQGVTFQPGSGRWVGFAQRQALT*LHKLVS
Trigger: CGAGACCAGCTTGTGCAACAAAGTGAGAGCCTGTCT...CTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CAA 90 bp GGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGATGGCTGGAGACCTCTGGCTaGCCAGCGGGCACCCATTCC +
Preference number: 5 (lower is better)
Translates to: GSEAFQNDLRIRGRAQGWLETSG*PAGTHS
Trigger: GGAATGGGTGCCCGCTGGCAAGCCAGAGGTCTCCAG...CCATCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CAA 90 bp ATAGGCAAGGCACAGTACCAGCTGCTGTGGGTTACAAAGACAAGAAGGCTAGGCGGGCTGGGCCCTGGATaGATTGGTCCGTTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: IGKAQYQLLWVTKTRRLGGLGPG*IGPLVW
Trigger: CCACACCAACGGACCAATCAATCCAGGGCCCAGCCC...GCCTAGCCTTCTTGTCTTTGTAACCCACAGCAGCTGGTACTGTGCCTTGCCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CAA 90 bp GGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGATGGGGGCCTCCGGCACCATaGCTGATGGTCCACAGGCAC +
Preference number: 5 (lower is better)
Translates to: GSEAFQNDLRIRGRAQGWGPPAP*LMVHRH
Trigger: GTGCCTGTGGACCATCAGCAATGGTGCCGGAGGCCC...CCATCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CAA 90 bp CAAGGCACAGTACCAGCTGCTGTGGGTTACAAAGACAAGAAGGCTAGGCCTCACAGCCGAAGTGGGTGCTaGGGTGGAGAGCACAGAAGG +
Preference number: 5 (lower is better)
Translates to: QGTVPAAVGYKDKKARPHSRSGC*GGEHRR
Trigger: CCTTCTGTGCTCTCCACCCAAGCACCCACTTCGGCT...GTGAGGCCTAGCCTTCTTGTCTTTGTAACCCACAGCAGCTGGTACTGTGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CAA 90 bp ATGCAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGTCAGCAGATCAGATGTaGGATGCAGGGAGTGACGTT +
Preference number: 5 (lower is better)
Translates to: MQGVTFQPGSGRWVGFAQSADQM*DAGSDV
Trigger: AACGTCACTCCCTGCATCCAACATCTGATCTGCTGA...CTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS CCA 90 bp GGATTGATTGGTCCGTTGGTGTGGGGTACAGACAGGATGCTGGCATaGGGTGTGGAGGATAAGGAAGTCCAGCTGTCAGGTCCCGAGAAA +
Preference number: 5 (lower is better)
Translates to: GLIGPLVWGTDRMLA*GVEDKEVQLSGPEK
Trigger: TTTCTCGGGACCTGACAGCTGGACTTCCTTATCCTCCACACCCCATGCCAGCATCCTGTCTGTACCCCACACCAACGGACCAATCAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
ENST00000465440.1
CDS-3UTR CAA 90 bp CACCTCCAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGAGCCGAAGTGGGTGCTaGGGTGGAGAGCACAGAAGG +
Preference number: 5 (lower is better)
Translates to: HLQLVGREIPQSDSLDQLSRSGC*GGEHRR
Trigger: CCTTCTGTGCTCTCCACCCAAGCACCCACTTCGGCT...CAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTGGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CAA 90 bp CAGGGAGTGACGTTTCAGCCAGGCTCTGGGAGGTGGGTCGGATTCGCACAGGTGGCTTTGGCAAAAGGATaGTACTTGATTTTGAGAGCC +
Preference number: 5 (lower is better)
Translates to: QGVTFQPGSGRWVGFAQVALAKG*YLILRA
Trigger: GGCTCTCAAAATCAAGTACAATCCTTTTGCCAAAGC...CACCTGTGCGAATCCGACCCACCTCCCAGAGCCTGGCTGAAACGTCACTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CAA 90 bp CTCTATGGCTTACACCCCATCCTGGTCTCAAAGCAGAAGTGTGAACCTGAGCCCCCACTTGAACAGTGCTaGGGGAGCGGAGAGAAGATA +
Preference number: 5 (lower is better)
Translates to: LYGLHPILVSKQKCEPEPPLEQC*GSGEKI
Trigger: TATCTTCTCTCCGCTCCCCAAGCACTGTTCAAGTGG...GGGCTCAGGTTCACACTTCTGCTTTGAGACCAGGATGGGGTGTAAGCCATAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR CAA 90 bp AGAAAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAACTGGAGACCTCTGGCTaGCCAGCGGGCACCCATTCC +
Preference number: 5 (lower is better)
Translates to: RKGSEAFQNDLRIRGRAQLETSG*PAGTHS
Trigger: GGAATGGGTGCCCGCTGGCAAGCCAGAGGTCTCCAG...TTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CAA 90 bp CTCTATGGCTTACACCCCATCCTGGTCTCAAAGCAGAAGTGTGAACCTGAGCCCCCGCCTCCATTGAGCTaGTTGGTCAGCTTCACTTTG +
Preference number: 5 (lower is better)
Translates to: LYGLHPILVSKQKCEPEPPPPLS*LVSFTL
Trigger: CAAAGTGAAGCTGACCAACAAGCTCAATGGAGGCGG...GGGCTCAGGTTCACACTTCTGCTTTGAGACCAGGATGGGGTGTAAGCCATAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CAA 90 bp GTGAACCTGAGCCCTGTGGCCACACATACTTTCCAGGCTTCACAAAGCAGGAAGCAGGGAAGGAGCAGTTaGTTACCATTCGATGGGCAC +
Preference number: 5 (lower is better)
Translates to: VNLSPVATHTFQASQSRKQGRSS*LPFDGH
Trigger: GTGCCCATCGAATGGTAACAAACTGCTCCTTCCCTG...CTTCCTGCTTTGTGAAGCCTGGAAAGTATGTGTGGCCACAGGGCTCAGGTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CAA 90 bp CTCTATGGCTTACACCCCATCCTGGTCTCAAAGCAGAAGTGTGAACCTGAGCCCCACACTCCATCTGGATaGGAAAAGATCCAGCCTCCC +
Preference number: 5 (lower is better)
Translates to: LYGLHPILVSKQKCEPEPHTPSG*EKIQPP
Trigger: GGGAGGCTGGATCTTTTCCAATCCAGATGGAGTGTG...GGGCTCAGGTTCACACTTCTGCTTTGAGACCAGGATGGGGTGTAAGCCATAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000441464.1
CDS-3UTR CAA 90 bp AAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGAGGGCTGGGCCCTGGATaGATTGGTCCGTTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: KGSEAFQNDLRIRGRAQGGLGPG*IGPLVW
Trigger: CCACACCAACGGACCAATCAATCCAGGGCCCAGCCC...TCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CAA 90 bp TGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATGCCTGCCTTGACCAATACAGGGCCTCCGGCACCATaGCTGATGGTCCACAGGCAC +
Preference number: 5 (lower is better)
Translates to: WESAMNVQRTEMPALTNTGPPAP*LMVHRH
Trigger: GTGCCTGTGGACCATCAGCAATGGTGCCGGAGGCCC...TGTATTGGTCAAGGCAGGCATCTCTGTTCTCTGAACATTCATTGCACTTTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CAA 90 bp GGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGATGGGGCACTTCTCGAACTTaGCCGAGAGCCGTTACCCAA +
Preference number: 5 (lower is better)
Translates to: GSEAFQNDLRIRGRAQGWGTSRT*PRAVTQ
Trigger: TTGGGTAACGGCTCTCGGCAAAGTTCGAGAAGTGCC...CCATCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR CAA 90 bp GGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGATGGAGGGAGTACATGGCATaGGGGTCCAACCCTGTGACA +
Preference number: 5 (lower is better)
Translates to: GSEAFQNDLRIRGRAQGWREYMA*GSNPVT
Trigger: TGTCACAGGGTTGGACCCCAATGCCATGTACTCCCT...CCATCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CAA 90 bp AATGAGGTGAGCTCTATGGCAGAGGCAAAAACAACGGGAGAACAGCGAGCAGAGCAGGGAAGGAGCAGTTaGTTACCATTCGATGGGCAC +
Preference number: 5 (lower is better)
Translates to: NEVSSMAEAKTTGEQRAEQGRSS*LPFDGH
Trigger: GTGCCCATCGAATGGTAACAAACTGCTCCTTCCCTG...CTCTGCTCGCTGTTCTCCCGTTGTTTTTGCCTCTGCCATAGAGCTCACCTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CAA 90 bp CAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGATGGGGCACACTCCATCTGGATaGGAAAAGATCCAGCCTCCC +
Preference number: 5 (lower is better)
Translates to: QLVGREIPQSDSLDQLMGHTPSG*EKIQPP
Trigger: GGGAGGCTGGATCTTTTCCAATCCAGATGGAGTGTG...CCCCATCAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000441464.1
CDS-3UTR CAA 90 bp GGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGATGGGGATTGATTGGTCCGTaGGTGTGGGGTACAGACAGG +
Preference number: 5 (lower is better)
Translates to: GSEAFQNDLRIRGRAQGWGLIGP*VWGTDR
Trigger: CCTGTCTGTACCCCACACCAACGGACCAATCAATCC...CCATCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS TCA 90 bp GGGAGCGGAGAGAAGATACCCTGGCTCTTGCCTAAGCTCCTAGGATaGCACCCCTTAAAAGTCTCCACATTATGCCACCAACCTGTTAAG +
Preference number: 5 (lower is better)
Translates to: GSGEKIPWLLPKLLG*HPLKVSTLCHQPVK
Trigger: CTTAACAGGTTGGTGGCATAATGTGGAGACTTTTAAGGGGTGTCATCCTAGGAGCTTAGGCAAGAGCCAGGGTATCTTCTCTCCGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS GCA 90 bp GATGATCTGAAGTTGCTTCTCCGTAGGGTCGCCTTTTTCCCTCCCTaGCTGAAGCTCACTCTCCACCACATTGAGCAGATGAGAAACAGT +
Preference number: 5 (lower is better)
Translates to: DDLKLLLRRVAFFPP*LKLTLHHIEQMRNS
Trigger: ACTGTTTCTCATCTGCTCAATGTGGTGGAGAGTGAGCTTCAGGCAGGGAGGGAAAAAGGCGACCCTACGGAGAAGCAACTTCAGATCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR CAA 90 bp CACCTCCAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGTCTTCCTTCCCTCACTaGCCTGCTTTTCAAACCCAC +
Preference number: 5 (lower is better)
Translates to: HLQLVGREIPQSDSLDQLSSFPH*PAFQTH
Trigger: GTGGGTTTGAAAAGCAGGCAAGTGAGGGAAGGAAGA...CAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTGGAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR CAA 90 bp CACAGGCAAGGTATAGAGGTGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATAGCCGAAGTGGGTGCTaGGGTGGAGAGCACAGAAGG +
Preference number: 5 (lower is better)
Translates to: HRQGIEVGKCNECSENRDSRSGC*GGEHRR
Trigger: CCTTCTGTGCTCTCCACCCAAGCACCCACTTCGGCT...ATCTCTGTTCTCTGAACATTCATTGCACTTTCCCACCTCTATACCTTGCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS GCA 90 bp CAGTTGATGGGGTTTCTAAGCACTCTACACATGGAAGGATCGCTGTaGAAAGAGGCTCCTAGGATCCTGCTTAACCATCCAGTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: QLMGFLSTLHMEGSL*KEAPRILLNHPVRK
Trigger: CTTCCTCACTGGATGGTTAAGCAGGATCCTAGGAGCCTCTTTGCACAGCGATCCTTCCATGTGTAGAGTGCTTAGAAACCCCATCAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
ENST00000465440.1
CDS-3UTR CAA 90 bp CACCTCCAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGGCTTTCCAGAACGATTaGAGAATAAGAGGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: HLQLVGREIPQSDSLDQLAFQND*RIRGRA
Trigger: TGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGC...CAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTGGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CAA 90 bp AAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGAAGCGATCCTCTTACCTaGGCCTCCAAAAGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: KGSEAFQNDLRIRGRAQGSDPLT*ASKRAE
Trigger: CTCAGCCCTTTTGGAGGCCAAGGTAAGAGGATCGCT...TCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CAA 90 bp TGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATGCCTGCCTTGACCAATACACAGGATGATCTGAAGTaGCTTCTCCGTAGGGTCGCC +
Preference number: 5 (lower is better)
Translates to: WESAMNVQRTEMPALTNTQDDLK*LLRRVA
Trigger: GGCGACCCTACGGAGAAGCAACTTCAGATCATCCTG...TGTATTGGTCAAGGCAGGCATCTCTGTTCTCTGAACATTCATTGCACTTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR CAA 90 bp TGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATGCCTGCCTTGACCAATACAAGGGAGTACATGGCATaGGGGTCCAACCCTGTGACA +
Preference number: 5 (lower is better)
Translates to: WESAMNVQRTEMPALTNTREYMA*GSNPVT
Trigger: TGTCACAGGGTTGGACCCCAATGCCATGTACTCCCT...TGTATTGGTCAAGGCAGGCATCTCTGTTCTCTGAACATTCATTGCACTTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CAA 90 bp CTCTATGGCTTACACCCCATCCTGGTCTCAAAGCAGAAGTGTGAACCTGAGCCCGGATTGTACTTGATTTaGAGAGCCGTTATCTCCTCA +
Preference number: 5 (lower is better)
Translates to: LYGLHPILVSKQKCEPEPGLYLI*RAVISS
Trigger: TGAGGAGATAACGGCTCTCAAAATCAAGTACAATCC...GGGCTCAGGTTCACACTTCTGCTTTGAGACCAGGATGGGGTGTAAGCCATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CAA 90 bp CAAGGCACAGTACCAGCTGCTGTGGGTTACAAAGACAAGAAGGCTAGGCCTCACGGATTGTACTTGATTTaGAGAGCCGTTATCTCCTCA +
Preference number: 5 (lower is better)
Translates to: QGTVPAAVGYKDKKARPHGLYLI*RAVISS
Trigger: TGAGGAGATAACGGCTCTCAAAATCAAGTACAATCC...GTGAGGCCTAGCCTTCTTGTCTTTGTAACCCACAGCAGCTGGTACTGTGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CAA 90 bp CACAGGCAAGGTATAGAGGTGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATGGATTGATTGGTCCGTaGGTGTGGGGTACAGACAGG +
Preference number: 5 (lower is better)
Translates to: HRQGIEVGKCNECSENRDGLIGP*VWGTDR
Trigger: CCTGTCTGTACCCCACACCAACGGACCAATCAATCC...ATCTCTGTTCTCTGAACATTCATTGCACTTTCCCACCTCTATACCTTGCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CAA 90 bp AGAAAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGATTGATTGGTCCGTaGGTGTGGGGTACAGACAGG +
Preference number: 5 (lower is better)
Translates to: RKGSEAFQNDLRIRGRAQGLIGP*VWGTDR
Trigger: CCTGTCTGTACCCCACACCAACGGACCAATCAATCC...TTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CAA 90 bp CACCTCCAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGGACTCACTAGATCAGTaGATGGGGTTTCTAAGCACT +
Preference number: 5 (lower is better)
Translates to: HLQLVGREIPQSDSLDQLDSLDQ*MGFLST
Trigger: AGTGCTTAGAAACCCCATCAACTGATCTAGTGAGTC...CAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTGGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CAA 90 bp GGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGATGGGCTTTCCAGAACGATTaGAGAATAAGAGGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: GSEAFQNDLRIRGRAQGWAFQND*RIRGRA
Trigger: TGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGC...CCATCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CAA 90 bp CTCTATGGCTTACACCCCATCCTGGTCTCAAAGCAGAAGTGTGAACCTGAGCCCGCTCATTTAACAGCTTaGCACCTTCTCCACAGAAAA +
Preference number: 5 (lower is better)
Translates to: LYGLHPILVSKQKCEPEPAHLTA*HLLHRK
Trigger: TTTTCTGTGGAGAAGGTGCAAAGCTGTTAAATGAGC...GGGCTCAGGTTCACACTTCTGCTTTGAGACCAGGATGGGGTGTAAGCCATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CAA 90 bp AGAATAAGAGGCAGGGCACAAGGATGGTACTTAACAAACTTCTGTCACCTAAGCAGCGATCCTCTTACCTaGGCCTCCAAAAGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: RIRGRAQGWYLTNFCHLSSDPLT*ASKRAE
Trigger: CTCAGCCCTTTTGGAGGCCAAGGTAAGAGGATCGCT...GCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS TCA 90 bp GATGAGATTTCTGAGGTCCAGGAACTTATTCTTCTCGGCCATCCCTaGGTAGGTTTAAATATCTCAAGCACAGTGCCTTTTGGCCCGGCA +
Preference number: 5 (lower is better)
Translates to: DEISEVQELILLGHP*VGLNISSTVPFGPA
Trigger: TGCCGGGCCAAAAGGCACTGTGCTTGAGATATTTAAACCTACTCAGGGATGGCCGAGAAGAATAAGTTCCTGGACCTCAGAAATCTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465440.1
CDS-3UTR CAA 90 bp AGAAAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGAGCCGTTACCCAACTaGCCTGCTTCTAGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: RKGSEAFQNDLRIRGRAQEPLPN*PASSFF
Trigger: GAAGAAGCTAGAAGCAGGCAAGTTGGGTAACGGCTC...TTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS-3UTR CAA 90 bp CACAGGCAAGGTATAGAGGTGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATCCGCCTCCATTGAGCTaGTTGGTCAGCTTCACTTTG +
Preference number: 5 (lower is better)
Translates to: HRQGIEVGKCNECSENRDPPPLS*LVSFTL
Trigger: CAAAGTGAAGCTGACCAACAAGCTCAATGGAGGCGG...ATCTCTGTTCTCTGAACATTCATTGCACTTTCCCACCTCTATACCTTGCCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CAA 90 bp CACCTCCAGCTAGTGGGAAGGGAGATTCCACAGTCTGACTCACTAGATCAGTTGGCTTTGGCAAAAGGATaGTACTTGATTTTGAGAGCC +
Preference number: 5 (lower is better)
Translates to: HLQLVGREIPQSDSLDQLALAKG*YLILRA
Trigger: GGCTCTCAAAATCAAGTACAATCCTTTTGCCAAAGC...CAACTGATCTAGTGAGTCAGACTGTGGAATCTCCCTTCCCACTAGCTGGAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CAA 90 bp CGAGAGGCTTACAGTCTAATAGGGAGAGACACACTCACAGGTAACAAAAATACAAGCGATCCTCTTACCTaGGCCTCCAAAAGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: REAYSLIGRDTLTGNKNTSDPLT*ASKRAE
Trigger: CTCAGCCCTTTTGGAGGCCAAGGTAAGAGGATCGCT...TGTATTTTTGTTACCTGTGAGTGTGTCTCTCCCTATTAGACTGTAAGCCTCTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS-3UTR CAA 90 bp AGAAAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAAGACAGGCTCTCACTTaGTTGCACAAGCTGGTCTCG +
Preference number: 5 (lower is better)
Translates to: RKGSEAFQNDLRIRGRAQRQALT*LHKLVS
Trigger: CGAGACCAGCTTGTGCAACAAAGTGAGAGCCTGTCT...TTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CAA 90 bp CAGTCTGACTCACTAGATCAGTTGATGGGGTTTCTAAGCACTCTACACATGGAAAGACAGGCTCTCACTTaGTTGCACAAGCTGGTCTCG +
Preference number: 5 (lower is better)
Translates to: QSDSLDQLMGFLSTLHMERQALT*LHKLVS
Trigger: CGAGACCAGCTTGTGCAACAAAGTGAGAGCCTGTCT...TTCCATGTGTAGAGTGCTTAGAAACCCCATCAACTGATCTAGTGAGTCAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CAA 90 bp CTAAGCACTCTACACATGGAAGGATCGCTGTGCAAAGAGGCTCCTAGGATCCTGGCAAAAGGATTGTACTaGATTTTGAGAGCCGTTATC +
Preference number: 5 (lower is better)
Translates to: LSTLHMEGSLCKEAPRILAKGLY*ILRAVI
Trigger: GATAACGGCTCTCAAAATCAAGTACAATCCTTTTGC...CAGGATCCTAGGAGCCTCTTTGCACAGCGATCCTTCCATGTGTAGAGTGCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CAA 90 bp TGGGAAAGTGCAATGAATGTTCAGAGAACAGAGATGCCTGCCTTGACCAATACATCAGCAGATCAGATGTaGGATGCAGGGAGTGACGTT +
Preference number: 5 (lower is better)
Translates to: WESAMNVQRTEMPALTNTSADQM*DAGSDV
Trigger: AACGTCACTCCCTGCATCCAACATCTGATCTGCTGA...TGTATTGGTCAAGGCAGGCATCTCTGTTCTCTGAACATTCATTGCACTTTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000431969.5
CDS GCA 90 bp GGTGTGGAGGATAAGGAAGTCCAGCTGTCAGGTCCCGAGAAAACTTaGAGATTATTGCTTGAGCTTTCTATCAAATTCACTGAGGGAGAA +
Preference number: 5 (lower is better)
Translates to: GVEDKEVQLSGPEKT*RLLLELSIKFTEGE
Trigger: TTCTCCCTCAGTGAATTTGATAGAAAGCTCAAGCAATAATCTGCAAGTTTTCTCGGGACCTGACAGCTGGACTTCCTTATCCTCCACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000441464.1
CDS GCA 90 bp GGTGTGGAGGATAAGGAAGTCCAGCTGTCAGGTCCCGAGAAAACTTaGAGATTATTGCTTGAGCTTTCTATCAAATTCACTTGGGGAAAT +
Preference number: 5 (lower is better)
Translates to: GVEDKEVQLSGPEKT*RLLLELSIKFTWGN
Trigger: ATTTCCCCAAGTGAATTTGATAGAAAGCTCAAGCAATAATCTGCAAGTTTTCTCGGGACCTGACAGCTGGACTTCCTTATCCTCCACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465440.1
CDS-3UTR CAA 90 bp AGAATAAGAGGCAGGGCACAAGGATGGTACTTAACAAACTTCTGTCACCTAAGCGACTCACTAGATCAGTaGATGGGGTTTCTAAGCACT +
Preference number: 5 (lower is better)
Translates to: RIRGRAQGWYLTNFCHLSDSLDQ*MGFLST
Trigger: AGTGCTTAGAAACCCCATCAACTGATCTAGTGAGTC...GCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CAA 90 bp AAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGAGCAAAAGGATTGTACTaGATTTTGAGAGCCGTTATC +
Preference number: 5 (lower is better)
Translates to: KGSEAFQNDLRIRGRAQGAKGLY*ILRAVI
Trigger: GATAACGGCTCTCAAAATCAAGTACAATCCTTTTGC...TCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CAA 90 bp AGAATAAGAGGCAGGGCACAAGGATGGTACTTAACAAACTTCTGTCACCTAAGCGCTTTGGCAAAAGGATaGTACTTGATTTTGAGAGCC +
Preference number: 5 (lower is better)
Translates to: RIRGRAQGWYLTNFCHLSALAKG*YLILRA
Trigger: GGCTCTCAAAATCAAGTACAATCCTTTTGCCAAAGC...GCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CAA 90 bp AGAAAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGCTCATTTAACAGCTTaGCACCTTCTCCACAGAAAA +
Preference number: 5 (lower is better)
Translates to: RKGSEAFQNDLRIRGRAQAHLTA*HLLHRK
Trigger: TTTTCTGTGGAGAAGGTGCAAAGCTGTTAAATGAGC...TTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CAA 90 bp AAAGGAAGTGAGGCTTTCCAGAACGATTTGAGAATAAGAGGCAGGGCACAAGGAGGATTGTACTTGATTTaGAGAGCCGTTATCTTGCAT +
Preference number: 5 (lower is better)
Translates to: KGSEAFQNDLRIRGRAQGGLYLI*RAVILH
Trigger: ATGCAAGATAACGGCTCTCAAAATCAAGTACAATCC...TCCTTGTGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGCCTCACTTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441464.1
CDS GCA 90 bp ATGGTGACCAGTGACATTATCCTAGGGCAAAATATAACCATGGCTTaGACTACAGGCACCAACAGTTTGTTAGTTCTTTCTCAGGGAAAT +
Preference number: 5 (lower is better)
Translates to: MVTSDIILGQNITMA*TTGTNSLLVLSQGN
Trigger: ATTTCCCTGAGAAAGAACTAACAAACTGTTGGTGCCTGTAGTGCAAGCCATGGTTATATTTTGCCCTAGGATAATGTCACTGGTCACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465440.1
CDS-3UTR CAA 90 bp AGAATAAGAGGCAGGGCACAAGGATGGTACTTAACAAACTTCTGTCACCTAAGCGCAAAAGGATTGTACTaGATTTTGAGAGCCGTTATC +
Preference number: 5 (lower is better)
Translates to: RIRGRAQGWYLTNFCHLSAKGLY*ILRAVI
Trigger: GATAACGGCTCTCAAAATCAAGTACAATCCTTTTGC...GCTTAGGTGACAGAAGTTTGTTAAGTACCATCCTTGTGCCCTGCCTCTTATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CAA 90 bp TACTTAACAAACTTCTGTCACCTAAGCATGGCAAGAATAAGCTGCAGAGAAAATGCTTTCCAGAACGATTaGAGAATAAGAGGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: YLTNFCHLSMARISCRENAFQND*RIRGRA
Trigger: TGCCCTGCCTCTTATTCTCAAATCGTTCTGGAAAGC...ATTTTCTCTGCAGCTTATTCTTGCCATGCTTAGGTGACAGAAGTTTGTTAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
CDS-3UTR CAA 90 bp CTTAACAAACTTCTGTCACCTAAGCATGGCAAGAATAAGCTGCAGAGAAAATGGGGCAAACAGAACCCTTaGTCTTCTGTAAAACCAGTT +
Preference number: 5 (lower is better)
Translates to: LNKLLSPKHGKNKLQRKWGKQNP*SSVKPV
Trigger: AACTGGTTTTACAGAAGACAAAGGGTTCTGTTTGCC...CCATTTTCTCTGCAGCTTATTCTTGCCATGCTTAGGTGACAGAAGTTTGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441464.1
CDS-3UTR CAA 90 bp CAGTCTGACTCACTAGATCAGTTGATGGGGTTTCTAAGCACTCTACACATGGAATTGAGAGCCGTTATCTaGCATTTACAAAGACAAGAA +
Preference number: 5 (lower is better)
Translates to: QSDSLDQLMGFLSTLHMELRAVI*HLQRQE
Trigger: TTCTTGTCTTTGTAAATGCAAGATAACGGCTCTCAA...TTCCATGTGTAGAGTGCTTAGAAACCCCATCAACTGATCTAGTGAGTCAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441464.1
CDS TCA 72 bp CCGGGCCTGGCCCACTGGGGCCTCCGGCACCATTGCTaGTGGTCCACAGGCACGGGTAGGGGCTGGGCCCTG +
Preference number: 6 (lower is better)
Translates to: PGLAHWGLRHHC*WSTGTGRGWAL
Trigger: CAGGGCCCAGCCCCTACCCGTGCCTGTGGACCATCAGCAATGGTGCCGGAGGCCCCAGTGGGCCAGGCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
ENST00000465440.1
CDS GCA 72 bp GGGTTTCCGAGGAGAAATGCTCCTGGGGTGCTGGCGTaGACCTCCGGGCCTGGCCCACTGGGGCCTCCGGCA +
Preference number: 6 (lower is better)
Translates to: GFPRRNAPGVLA*TSGPGPLGPPA
Trigger: TGCCGGAGGCCCCAGTGGGCCAGGCCCGGAGGTGCACGCCAGCACCCCAGGAGCATTTCTCCTCGGAAACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
ENST00000465440.1
CDS GCA 72 bp CCACCCGCTCCTGGGCCACCCCAGCCCGCGAAGGGATaGGAGGCCACTGCTGTCCAGGTGGACACAGCAATG +
Preference number: 6 (lower is better)
Translates to: PPAPGPPQPAKG*EATAVQVDTAM
Trigger: CATTGCTGTGTCCACCTGGACAGCAGTGGCCTCGCATCCCTTCGCGGGCTGGGGTGGCCCAGGAGCGGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
ENST00000465440.1
CDS CCA 72 bp GCGAGGGCTCCCCCAGAACCTCCACACCAGCCGAAGTaGGTGCTTGGGTGGAGAGCACAGAAGGGGGTGAAG +
Preference number: 6 (lower is better)
Translates to: ARAPPEPPHQPK*VLGWRAQKGVK
Trigger: CTTCACCCCCTTCTGTGCTCTCCACCCAAGCACCCACTTCGGCTGGTGTGGAGGTTCTGGGGGAGCCCTCGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
ENST00000465440.1
CDS CCA 72 bp AGCCCGCGAAGGGATGCGAGGCCACTGCTGTCCAGGTaGACACAGCAATGCTGGTTAGCGAGGGCTCCCCCA +
Preference number: 6 (lower is better)
Translates to: SPRRDARPLLSR*TQQCWLARAPP
Trigger: TGGGGGAGCCCTCGCTAACCAGCATTGCTGTGTCCACCTGGACAGCAGTGGCCTCGCATCCCTTCGCGGGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
ENST00000465440.1
CDS GCA 72 bp GATGCGAGGCCACTGCTGTCCAGGTGGACACAGCAATaGTGGTTAGCGAGGGCTCCCCCAGAACCTCCACAC +
Preference number: 6 (lower is better)
Translates to: DARPLLSRWTQQ*WLARAPPEPPH
Trigger: GTGTGGAGGTTCTGGGGGAGCCCTCGCTAACCAGCATTGCTGTGTCCACCTGGACAGCAGTGGCCTCGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
ENST00000465440.1
CDS CCA 72 bp TCCCCCAGAACCTCCACACCAGCCGAAGTGGGTGCTTaGGTGGAGAGCACAGAAGGGGGTGAAGTCACAGCT +
Preference number: 6 (lower is better)
Translates to: SPRTSTPAEVGA*VESTEGGEVTA
Trigger: AGCTGTGACTTCACCCCCTTCTGTGCTCTCCACCCAAGCACCCACTTCGGCTGGTGTGGAGGTTCTGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
ENST00000465440.1
CDS TCA 72 bp GCAAAGAGGCTCCTAGGATCCTGCTTAACCATCCAGTaGGGAAGGAGAATGGTGCCCACCCGCTCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: AKRLLGSCLTIQ*GRRMVPTRSWA
Trigger: GGCCCAGGAGCGGGTGGGCACCATTCTCCTTCCTCACTGGATGGTTAAGCAGGATCCTAGGAGCCTCTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
ENST00000465440.1
CDS CAA 72 bp CTGCCAGAGAGGTGCATCCTCCAGGATGATCTGAAGTaGCTTCTCCGTAGGGTCGCCTTTTTCCCTCCCTGC +
Preference number: 6 (lower is better)
Translates to: LPERCILQDDLK*LLRRVAFFPPC
Trigger: GCAGGGAGGGAAAAAGGCGACCCTACGGAGAAGCAACTTCAGATCATCCTGGAGGATGCACCTCTCTGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS CCA 72 bp GAGCAGGCAGAGGCAGAGGAGCGGCATACTGGTAATTaGAGTTTCCTGCTGTGCACACTCCATCTGGATTGG +
Preference number: 6 (lower is better)
Translates to: EQAEAEERHTGN*SFLLCTLHLDW
Trigger: CCAATCCAGATGGAGTGTGCACAGCAGGAAACTCCAATTACCAGTATGCCGCTCCTCTGCCTCTGCCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000441464.1
CDS CAA 90 bp CTTGAATCTCTGCCAGAGAGGTGCATCCTCCAGGATGATCTGAAGTaGCTTCTCCGTAGGGTCGCCTTTTTCCCTCCCTGCCTGAAGCTC +
Preference number: 6 (lower is better)
Translates to: LESLPERCILQDDLK*LLRRVAFFPPCLKL
Trigger: GAGCTTCAGGCAGGGAGGGAAAAAGGCGACCCTACGGAGAAGCAACTTCAGATCATCCTGGAGGATGCACCTCTCTGGCAGAGATTCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS GCA 72 bp AAGTTGCTTCTCCGTAGGGTCGCCTTTTTCCCTCCCTaGCTGAAGCTCACTCTCCACCACATTGAGCAGATG +
Preference number: 6 (lower is better)
Translates to: KLLLRRVAFFPP*LKLTLHHIEQM
Trigger: CATCTGCTCAATGTGGTGGAGAGTGAGCTTCAGGCAGGGAGGGAAAAAGGCGACCCTACGGAGAAGCAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS CAA 72 bp GCACTTCTCGAACTTTGCCGAGAGCCGTTACCCAACTaGCCTGCTTCTAGCTTCTTCCTTCCCTCACTTGCC +
Preference number: 6 (lower is better)
Translates to: ALLELCREPLPN*PASSFFLPSLA
Trigger: GGCAAGTGAGGGAAGGAAGAAGCTAGAAGCAGGCAAGTTGGGTAACGGCTCTCGGCAAAGTTCGAGAAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS TCA 72 bp CTTCCTTCCCTCACTTGCCTGCTTTTCAAACCCACTTaGACAGTGCTTGGGGAGCGGAGAGAAGATACCCTG +
Preference number: 6 (lower is better)
Translates to: LPSLTCLLFKPT*TVLGERREDTL
Trigger: CAGGGTATCTTCTCTCCGCTCCCCAAGCACTGTTCAAGTGGGTTTGAAAAGCAGGCAAGTGAGGGAAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS TCA 72 bp AATCTCTGCCAGAGAGGTGCATCCTCCAGGATGATCTaGAGTTGCTTCTCCGTAGGGTCGCCTTTTTCCCTC +
Preference number: 6 (lower is better)
Translates to: NLCQRGASSRMI*SCFSVGSPFSL
Trigger: GAGGGAAAAAGGCGACCCTACGGAGAAGCAACTTCAGATCATCCTGGAGGATGCACCTCTCTGGCAGAGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS CCA 72 bp CACTTGCCTGCTTTTCAAACCCACTTGAACAGTGCTTaGGGAGCGGAGAGAAGATACCCTGGCTCTTGCCTA +
Preference number: 6 (lower is better)
Translates to: HLPAFQTHLNSA*GAERRYPGSCL
Trigger: TAGGCAAGAGCCAGGGTATCTTCTCTCCGCTCCCCAAGCACTGTTCAAGTGGGTTTGAAAAGCAGGCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS CAA 90 bp TTCCTTCCCTCACTTGCCTGCTTTTCAAACCCACTTGAACAGTGCTaGGGGAGCGGAGAGAAGATACCCTGGCTCTTGCCTAAGCTCCTA +
Preference number: 6 (lower is better)
Translates to: FLPSLACFSNPLEQC*GSGEKIPWLLPKLL
Trigger: TAGGAGCTTAGGCAAGAGCCAGGGTATCTTCTCTCCGCTCCCCAAGCACTGTTCAAGTGGGTTTGAAAAGCAGGCAAGTGAGGGAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS GCA 72 bp GGGTTTCTAAGCACTCTACACATGGAAGGATCGCTGTaGAAAGAGGCTCCTAGGATCCTGCTTAACCATCCA +
Preference number: 6 (lower is better)
Translates to: GFLSTLHMEGSL*KEAPRILLNHP
Trigger: TGGATGGTTAAGCAGGATCCTAGGAGCCTCTTTGCACAGCGATCCTTCCATGTGTAGAGTGCTTAGAAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367821.8
ENST00000431969.5
ENST00000441464.1
ENST00000465440.1
CDS TCA 72 bp GAGAAGATACCCTGGCTCTTGCCTAAGCTCCTAGGATaGCACCCCTTAAAAGTCTCCACATTATGCCACCAA +
Preference number: 6 (lower is better)
Translates to: EKIPWLLPKLLG*HPLKVSTLCHQ
Trigger: TTGGTGGCATAATGTGGAGACTTTTAAGGGGTGTCATCCTAGGAGCTTAGGCAAGAGCCAGGGTATCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367821.8
CDS CAA 90 bp AGGAAGTCCAGCTGTCAGGTCCCGAGAAAACTTGCAGATTATTGCTaGAGCTTTCTATCAAATTCACTGAGGGAGAATGGTTTCTGTGCA +
Preference number: 6 (lower is better)
Translates to: RKSSCQVPRKLADYC*SFLSNSLRENGFCA
Trigger: TGCACAGAAACCATTCTCCCTCAGTGAATTTGATAGAAAGCTCAAGCAATAATCTGCAAGTTTTCTCGGGACCTGACAGCTGGACTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000441464.1
CDS CAA 90 bp AGGAAGTCCAGCTGTCAGGTCCCGAGAAAACTTGCAGATTATTGCTaGAGCTTTCTATCAAATTCAAGTGAGAATAGGTCACATGCTGGC +
Preference number: 6 (lower is better)
Translates to: RKSSCQVPRKLADYC*SFLSNSSENRSHAG
Trigger: GCCAGCATGTGACCTATTCTCACTTGAATTTGATAGAAAGCTCAAGCAATAATCTGCAAGTTTTCTCGGGACCTGACAGCTGGACTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431969.5
CDS TCA 72 bp TCTGAGGTCCAGGAACTTATTCTTCTCGGCCATCCCTaGGTAGGTTTAAATATCTCAAGCACAGTGCCTTTT +
Preference number: 6 (lower is better)
Translates to: SEVQELILLGHP*VGLNISSTVPF
Trigger: AAAAGGCACTGTGCTTGAGATATTTAAACCTACTCAGGGATGGCCGAGAAGAATAAGTTCCTGGACCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465440.1
CDS CAA 72 bp GTCCAGCTGTCAGGTCCCGAGAAAACTTGCAGATTATaGCTTGAGCTTTCTATCAAATTCACTGAGGGAGAA +
Preference number: 6 (lower is better)
Translates to: VQLSGPEKTCRL*LELSIKFTEGE
Trigger: TTCTCCCTCAGTGAATTTGATAGAAAGCTCAAGCAATAATCTGCAAGTTTTCTCGGGACCTGACAGCTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000441464.1
CDS CAA 90 bp GATAAGGAAGTCCAGCTGTCAGGTCCCGAGAAAACTTGCAGATTATaGCTTGAGCTTTCTATCAAATTCACTGAGGGAGAATGGTTTCTG +
Preference number: 6 (lower is better)
Translates to: DKEVQLSGPEKTCRL*LELSIKFTEGEWFL
Trigger: CAGAAACCATTCTCCCTCAGTGAATTTGATAGAAAGCTCAAGCAATAATCTGCAAGTTTTCTCGGGACCTGACAGCTGGACTTCCTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000441464.1
CDS CAA 72 bp AGCTGTCAGGTCCCGAGAAAACTTGCAGATTATTGCTaGAGCTTTCTATCAAATTCACTGAGGGAGAATGGT +
Preference number: 6 (lower is better)
Translates to: SCQVPRKLADYC*SFLSNSLRENG
Trigger: ACCATTCTCCCTCAGTGAATTTGATAGAAAGCTCAAGCAATAATCTGCAAGTTTTCTCGGGACCTGACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367821.8
ENST00000441464.1
CDS CAA 72 bp GTCCAGCTGTCAGGTCCCGAGAAAACTTGCAGATTATaGCTTGAGCTTTCTATCAAATTCACTTGGGGAAAT +
Preference number: 6 (lower is better)
Translates to: VQLSGPEKTCRL*LELSIKFTWGN
Trigger: ATTTCCCCAAGTGAATTTGATAGAAAGCTCAAGCAATAATCTGCAAGTTTTCTCGGGACCTGACAGCTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465440.1
CDS CAA 90 bp AGGAAGTCCAGCTGTCAGGTCCCGAGAAAACTTGCAGATTATTGCTaGAGCTTTCTATCAAATTCACTTGGGGAAATAACAACAGTTGAA +
Preference number: 6 (lower is better)
Translates to: RKSSCQVPRKLADYC*SFLSNSLGEITTVE
Trigger: TTCAACTGTTGTTATTTCCCCAAGTGAATTTGATAGAAAGCTCAAGCAATAATCTGCAAGTTTTCTCGGGACCTGACAGCTGGACTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465440.1
CDS CAA 90 bp GATAAGGAAGTCCAGCTGTCAGGTCCCGAGAAAACTTGCAGATTATaGCTTGAGCTTTCTATCAAATTCACTTGGGGAAATAACAACAGT +
Preference number: 6 (lower is better)
Translates to: DKEVQLSGPEKTCRL*LELSIKFTWGNNNS
Trigger: ACTGTTGTTATTTCCCCAAGTGAATTTGATAGAAAGCTCAAGCAATAATCTGCAAGTTTTCTCGGGACCTGACAGCTGGACTTCCTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465440.1
CDS GCA 72 bp AGTGACATTATCCTAGGGCAAAATATAACCATGGCTTaGACTACAGGCACCAACAGTTTGTTAGTTCTTTCT +
Preference number: 6 (lower is better)
Translates to: SDIILGQNITMA*TTGTNSLLVLS
Trigger: AGAAAGAACTAACAAACTGTTGGTGCCTGTAGTGCAAGCCATGGTTATATTTTGCCCTAGGATAATGTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465440.1
CDS CAA 72 bp AGCTGTCAGGTCCCGAGAAAACTTGCAGATTATTGCTaGAGCTTTCTATCAAATTCAAGTGAGAATAGGTCA +
Preference number: 6 (lower is better)
Translates to: SCQVPRKLADYC*SFLSNSSENRS
Trigger: TGACCTATTCTCACTTGAATTTGATAGAAAGCTCAAGCAATAATCTGCAAGTTTTCTCGGGACCTGACAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431969.5
CDS CAA 72 bp AGCTGTCAGGTCCCGAGAAAACTTGCAGATTATTGCTaGAGCTTTCTATCAAATTCACTTGGGGAAATAACA +
Preference number: 6 (lower is better)
Translates to: SCQVPRKLADYC*SFLSNSLGEIT
Trigger: TGTTATTTCCCCAAGTGAATTTGATAGAAAGCTCAAGCAATAATCTGCAAGTTTTCTCGGGACCTGACAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465440.1